BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032179
(146 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1A8Q|A Chain A, Bromoperoxidase A1
Length = 274
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 51 WHSMHNVICGGAKYMD-----DYLESLIENKVKLYVIQGDRDQVIPIECSINIRRK-VPN 104
+ +M I GG + +D D+ E L + + V+ GD DQV+PI+ + + +PN
Sbjct: 182 YMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPN 241
Query: 105 AEVTIVPNANHN-SVILGREKDFTETL 130
AE+ + ++H +++ G ++ F L
Sbjct: 242 AELKVYEGSSHGIAMVPGDKEKFNRDL 268
>pdb|1A8S|A Chain A, Chloroperoxidase FPROPIONATE COMPLEX
Length = 273
Score = 33.1 bits (74), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 67 DYLESLIENKVKLYVIQGDRDQVIPIECS-INIRRKVPNAEVTIVPNANHN 116
D+ E L + V V+ GD DQV+PIE S I V + + I A H
Sbjct: 204 DFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHG 254
>pdb|2WTM|A Chain A, Est1e From Butyrivibrio Proteoclasticus
pdb|2WTM|B Chain B, Est1e From Butyrivibrio Proteoclasticus
pdb|2WTM|C Chain C, Est1e From Butyrivibrio Proteoclasticus
pdb|2WTM|D Chain D, Est1e From Butyrivibrio Proteoclasticus
pdb|2WTN|A Chain A, Ferulic Acid Bound To Est1e From Butyrivibrio
Proteoclasticus
pdb|2WTN|B Chain B, Ferulic Acid Bound To Est1e From Butyrivibrio
Proteoclasticus
Length = 251
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 11/48 (22%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 69 LESLIENKVK-LYVIQGDRDQVIPIECSINIRRKVPNAEVTIVPNANH 115
+E ++ K + ++ GD+D+ +P E S+ ++ N ++ +P H
Sbjct: 181 VEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQYKNCKLVTIPGDTH 228
>pdb|3FOB|A Chain A, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
pdb|3FOB|B Chain B, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
pdb|3FOB|C Chain C, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
Length = 281
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 67 DYLESLIENKVKLYVIQGDRDQVIPIECSINIRRK-VPNAEVTIVPNANHNSVILGREKD 125
D+ + L + + +I GD D +P E S + + +PN++V ++ H + K+
Sbjct: 212 DFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAIPNSKVALIKGGPHG-LNATHAKE 270
Query: 126 FTETL 130
F E L
Sbjct: 271 FNEAL 275
>pdb|3HI4|A Chain A, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|B Chain B, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|C Chain C, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|D Chain D, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|E Chain E, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|F Chain F, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
Length = 271
Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 56 NVICGGAKYMDDYLESLIENKVKLYVIQGDRDQVIPIECSINIRRK-VPNAEVTIVPNAN 114
V C A D+ + + V VI GD DQ++P E + + + + AE+ + +A
Sbjct: 191 TVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAP 250
Query: 115 HNSVI 119
H +
Sbjct: 251 HGFAV 255
>pdb|1VA4|A Chain A, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|B Chain B, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|C Chain C, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|D Chain D, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|E Chain E, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|F Chain F, Pseudomonas Fluorescens Aryl Esterase
Length = 279
Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 56 NVICGGAKYMDDYLESLIENKVKLYVIQGDRDQVIPIECSINIRRK-VPNAEVTIVPNAN 114
V C A D+ + + V VI GD DQ++P E + + + + AE+ + +A
Sbjct: 191 TVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAP 250
Query: 115 HNSVI 119
H +
Sbjct: 251 HGFAV 255
>pdb|3IA2|A Chain A, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|B Chain B, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|C Chain C, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|D Chain D, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|E Chain E, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|F Chain F, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
Length = 271
Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 56 NVICGGAKYMDDYLESLIENKVKLYVIQGDRDQVIPIECSINIRRK-VPNAEVTIVPNAN 114
V C A D+ + + V VI GD DQ++P E + + + + AE+ + +A
Sbjct: 191 TVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAP 250
Query: 115 HNSVI 119
H +
Sbjct: 251 HGFAV 255
>pdb|3T4U|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
Length = 271
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 56 NVICGGAKYMDDYLESLIENKVKLYVIQGDRDQVIPIECSINIRRK-VPNAEVTIVPNAN 114
V C A D+ + + V VI GD DQ++P E + + + + AE+ + +A
Sbjct: 191 TVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAP 250
Query: 115 HNSVI 119
H +
Sbjct: 251 HGFAV 255
>pdb|3HEA|A Chain A, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|B Chain B, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|C Chain C, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|D Chain D, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|E Chain E, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|F Chain F, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
Length = 271
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 56 NVICGGAKYMDDYLESLIENKVKLYVIQGDRDQVIPIECSINIRRK-VPNAEVTIVPNAN 114
V C A D+ + + V VI GD DQ++P E + + + + AE+ + +A
Sbjct: 191 TVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAP 250
Query: 115 HNSVI 119
H +
Sbjct: 251 HGFAV 255
>pdb|1U8X|X Chain X, Crystal Structure Of Glva From Bacillus Subtilis, A
Metal-requiring, Nad-dependent
6-phospho-alpha-glucosidase
Length = 472
Score = 29.3 bits (64), Expect = 0.89, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 67 DYLESLIENKVKLYVIQGDRDQVIPIECSINIRRKVPNAE 106
D+LE K+KLY +R I C + IR K P+ E
Sbjct: 50 DHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIE 89
>pdb|4DJD|D Chain D, Crystal Structure Of Folate-Free Corrinoid Iron-Sulfur
Protein (Cfesp) In Complex With Its Methyltransferase
(Metr)
pdb|4DJD|F Chain F, Crystal Structure Of Folate-Free Corrinoid Iron-Sulfur
Protein (Cfesp) In Complex With Its Methyltransferase
(Metr)
pdb|4DJE|D Chain D, Crystal Structure Of Folate-Bound Corrinoid Iron-Sulfur
Protein (Cfesp) In Complex With Its Methyltransferase
(Metr), Co-Crystallized With Folate
pdb|4DJE|F Chain F, Crystal Structure Of Folate-Bound Corrinoid Iron-Sulfur
Protein (Cfesp) In Complex With Its Methyltransferase
(Metr), Co-Crystallized With Folate
pdb|4DJF|D Chain D, Crystal Structure Of Folate-Bound Corrinoid Iron-Sulfur
Protein (Cfesp) In Complex With Its Methyltransferase
(Metr), Co-Crystallized With Folate And Ti(Iii) Citrate
Reductant
pdb|4DJF|F Chain F, Crystal Structure Of Folate-Bound Corrinoid Iron-Sulfur
Protein (Cfesp) In Complex With Its Methyltransferase
(Metr), Co-Crystallized With Folate And Ti(Iii) Citrate
Reductant
Length = 323
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 12/85 (14%)
Query: 33 RDLNFII--MDLPRHTHHSAWHSMHNVICGGAKYMDDYLESLIENKVKLYVIQGDRDQVI 90
+ LN +I M+LP H + + GG Y +Y S++E +++L +QGD+ +
Sbjct: 195 KQLNILINEMNLPLD------HIVIDPSIGGLGYGIEYSFSIME-RIRLGALQGDKMLSM 247
Query: 91 PIECSINI---RRKVPNAEVTIVPN 112
P+ C++ R K +A V+ P
Sbjct: 248 PVICTVGYEAWRAKEASAPVSEYPG 272
>pdb|1J1I|A Chain A, Crystal Structure Of A His-Tagged Serine Hydrolase
Involved In The Carbazole Degradation (Carc Enzyme)
Length = 296
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 60 GGAKYMDDYLESLIENKVKLYVIQGDRDQVIPIECSINIRRKVPNAEVTIVPNANHNSVI 119
GG Y +++ + +V V+QG D+V+P+E + + ++ I+P+ H ++I
Sbjct: 209 GGLFYDPEFIRKV---QVPTLVVQGKDDKVVPVETAYKFLDLIDDSWGYIIPHCGHWAMI 265
>pdb|1AZW|A Chain A, Proline Iminopeptidase From Xanthomonas Campestris Pv.
Citri
pdb|1AZW|B Chain B, Proline Iminopeptidase From Xanthomonas Campestris Pv.
Citri
Length = 313
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 9/37 (24%), Positives = 22/37 (59%)
Query: 81 VIQGDRDQVIPIECSINIRRKVPNAEVTIVPNANHNS 117
++ G D V P++ + ++ + P A++ I P + H++
Sbjct: 260 IVHGRYDVVCPLQSAWDLHKAWPKAQLQISPASGHSA 296
>pdb|2F8M|A Chain A, Ribose 5-Phosphate Isomerase From Plasmodium Falciparum
pdb|2F8M|B Chain B, Ribose 5-Phosphate Isomerase From Plasmodium Falciparum
Length = 244
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 70 ESLIENKVKLYVIQGDRDQVIPIECSINIRRKVPNAEVTIVPNANHNSVILGRE--KDFT 127
E +IEN +K+Y ++G C+ IR++ N E+ I N N+ E +D
Sbjct: 154 EKIIENLLKIYTLKG---------CTYKIRKR--NGEIFITDNKNYIVDFFFTEPIQDLL 202
Query: 128 ETLEQIWVSSADIN 141
ET +I +++ ++
Sbjct: 203 ETCTRIKMTTGVVD 216
>pdb|3FSG|D Chain D, Crystal Structure Of AlphaBETA SUPERFAMILY HYDROLASE FROM
OENOCOCCUS Oeni Psu-1
Length = 272
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 15/92 (16%)
Query: 47 HHSAWHSMHNVICGGAKYMD----DYLES----LIENKVK-------LYVIQGDRDQVIP 91
++ AWH N+I G + D D L++ E K+K + G DQV+
Sbjct: 164 NNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIXVGRNDQVVG 223
Query: 92 IECSINIRRKVPNAEVTIVPNANHNSVILGRE 123
+ + + N E+ ++ HN I RE
Sbjct: 224 YQEQLKLINHNENGEIVLLNRTGHNLXIDQRE 255
>pdb|3FSG|A Chain A, Crystal Structure Of AlphaBETA SUPERFAMILY HYDROLASE FROM
OENOCOCCUS Oeni Psu-1
pdb|3FSG|B Chain B, Crystal Structure Of AlphaBETA SUPERFAMILY HYDROLASE FROM
OENOCOCCUS Oeni Psu-1
pdb|3FSG|C Chain C, Crystal Structure Of AlphaBETA SUPERFAMILY HYDROLASE FROM
OENOCOCCUS Oeni Psu-1
Length = 272
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 15/92 (16%)
Query: 47 HHSAWHSMHNVICGGAKYMD----DYLES----LIENKVK-------LYVIQGDRDQVIP 91
++ AWH N+I G + D D L++ E K+K + G DQV+
Sbjct: 164 NNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIXVGRNDQVVG 223
Query: 92 IECSINIRRKVPNAEVTIVPNANHNSVILGRE 123
+ + + N E+ ++ HN I RE
Sbjct: 224 YQEQLKLINHNENGEIVLLNRTGHNLXIDQRE 255
>pdb|1Q32|A Chain A, Crystal Structure Analysis Of The Yeast Tyrosyl-Dna
Phosphodiesterase
pdb|1Q32|B Chain B, Crystal Structure Analysis Of The Yeast Tyrosyl-Dna
Phosphodiesterase
pdb|1Q32|C Chain C, Crystal Structure Analysis Of The Yeast Tyrosyl-Dna
Phosphodiesterase
pdb|1Q32|D Chain D, Crystal Structure Analysis Of The Yeast Tyrosyl-Dna
Phosphodiesterase
Length = 544
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Query: 52 HSMHNVICGGAKYMDDYLESLIENKVKLYVIQGDRDQVIPIECSIN------IRRKVPNA 105
++ I +Y D+L V+ I G + ++PIE I +KV
Sbjct: 112 ETLKRSILFSFQYELDFLLRQFHQNVENITIVGQKGTIMPIEARAMDATLAVILKKVKLI 171
Query: 106 EVTIVPNANHNSVIL 120
E+T+ P A+H++ ++
Sbjct: 172 EITMPPFASHHTKLI 186
>pdb|3SQ7|A Chain A, Crystal Structure Analysis Of The Yeast Tyrosyl-Dna
Phosphodiesterase H432n_glu Mutant
pdb|3SQ7|B Chain B, Crystal Structure Analysis Of The Yeast Tyrosyl-Dna
Phosphodiesterase H432n_glu Mutant
pdb|3SQ7|C Chain C, Crystal Structure Analysis Of The Yeast Tyrosyl-Dna
Phosphodiesterase H432n_glu Mutant
pdb|3SQ7|D Chain D, Crystal Structure Analysis Of The Yeast Tyrosyl-Dna
Phosphodiesterase H432n_glu Mutant
Length = 470
Score = 26.2 bits (56), Expect = 6.2, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 63 KYMDDYLESLIENKVKLYVIQGDRDQVIPIECSIN------IRRKVPNAEVTIVPNANHN 116
+Y D+L V+ I G + ++PIE I +KV E+T+ P A+H+
Sbjct: 46 QYELDFLLRQFHQNVENITIVGQKGTIMPIEARAMDATLAVILKKVKLIEITMPPFASHH 105
Query: 117 SVIL 120
+ ++
Sbjct: 106 TKLI 109
>pdb|3SQ5|A Chain A, Crystal Structure Analysis Of The Yeast Tyrosyl-Dna
Phosphodiesterase H432n Mutant
pdb|3SQ5|B Chain B, Crystal Structure Analysis Of The Yeast Tyrosyl-Dna
Phosphodiesterase H432n Mutant
pdb|3SQ5|C Chain C, Crystal Structure Analysis Of The Yeast Tyrosyl-Dna
Phosphodiesterase H432n Mutant
pdb|3SQ5|D Chain D, Crystal Structure Analysis Of The Yeast Tyrosyl-Dna
Phosphodiesterase H432n Mutant
Length = 470
Score = 26.2 bits (56), Expect = 6.2, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 63 KYMDDYLESLIENKVKLYVIQGDRDQVIPIECSIN------IRRKVPNAEVTIVPNANHN 116
+Y D+L V+ I G + ++PIE I +KV E+T+ P A+H+
Sbjct: 46 QYELDFLLRQFHQNVENITIVGQKGTIMPIEARAMDATLAVILKKVKLIEITMPPFASHH 105
Query: 117 SVIL 120
+ ++
Sbjct: 106 TKLI 109
>pdb|3OOS|A Chain A, The Structure Of An AlphaBETA FOLD FAMILY HYDROLASE FROM
BACILLUS Anthracis Str. Sterne
Length = 278
Score = 25.8 bits (55), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 76 KVKLYVIQGDRDQVIPIECSINIRRKVPNAEVTIVPNANHNSVI 119
K+ ++ G D P S I +PNA +T +NHN +
Sbjct: 221 KIPSFIYCGKHDVQCPYIFSCEIANLIPNATLTKFEESNHNPFV 264
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.138 0.450
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,041,991
Number of Sequences: 62578
Number of extensions: 188235
Number of successful extensions: 464
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 452
Number of HSP's gapped (non-prelim): 26
length of query: 146
length of database: 14,973,337
effective HSP length: 90
effective length of query: 56
effective length of database: 9,341,317
effective search space: 523113752
effective search space used: 523113752
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 46 (22.3 bits)