Query 032180
Match_columns 146
No_of_seqs 132 out of 1179
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 17:16:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032180.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032180hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g1k_A Triosephosphate isomera 99.9 4.3E-25 1.5E-29 183.8 8.7 95 39-135 14-121 (272)
2 3th6_A Triosephosphate isomera 99.9 4.5E-25 1.5E-29 181.6 8.5 84 52-135 3-96 (249)
3 2vxn_A Triosephosphate isomera 99.9 8.4E-25 2.9E-29 180.2 8.3 87 49-136 1-98 (251)
4 1mo0_A TIM, triosephosphate is 99.9 7.5E-25 2.6E-29 182.6 8.0 90 46-135 16-115 (275)
5 3kxq_A Triosephosphate isomera 99.9 3.8E-25 1.3E-29 184.4 5.8 95 39-135 14-121 (275)
6 1r2r_A TIM, triosephosphate is 99.9 1.1E-24 3.9E-29 179.1 8.3 86 51-136 2-97 (248)
7 3krs_A Triosephosphate isomera 99.9 1.3E-24 4.6E-29 180.7 8.2 92 39-135 14-119 (271)
8 3qst_A Triosephosphate isomera 99.9 1.9E-24 6.5E-29 178.4 8.7 84 52-135 4-98 (255)
9 2yc6_A Triosephosphate isomera 99.9 2.2E-24 7.6E-29 178.2 8.2 87 50-136 1-98 (257)
10 2j27_A Triosephosphate isomera 99.9 2.4E-24 8.3E-29 177.3 8.3 85 51-136 2-97 (250)
11 1o5x_A TIM, triosephosphate is 99.9 2.9E-24 9.9E-29 176.7 8.3 84 52-135 2-96 (248)
12 2i9e_A Triosephosphate isomera 99.9 3.1E-24 1.1E-28 177.6 8.3 84 52-135 2-95 (259)
13 1ney_A TIM, triosephosphate is 99.9 3.5E-24 1.2E-28 176.2 8.5 85 52-136 1-96 (247)
14 1m6j_A TIM, TPI, triosephospha 99.9 3.1E-24 1.1E-28 177.5 6.8 86 50-136 1-104 (261)
15 3m9y_A Triosephosphate isomera 99.9 4.9E-24 1.7E-28 175.8 8.0 83 52-135 2-99 (254)
16 1b9b_A TIM, protein (triosepho 99.9 7.2E-24 2.5E-28 175.0 8.9 85 52-136 2-98 (255)
17 1yya_A Triosephosphate isomera 99.9 6.6E-24 2.2E-28 174.8 8.4 85 52-136 1-96 (250)
18 3ta6_A Triosephosphate isomera 99.9 4.7E-24 1.6E-28 177.1 7.5 84 52-135 2-101 (267)
19 1tre_A Triosephosphate isomera 99.9 6.2E-24 2.1E-28 175.4 7.7 85 52-136 1-97 (255)
20 1aw2_A Triosephosphate isomera 99.9 8.8E-24 3E-28 174.5 7.7 84 52-135 1-98 (256)
21 3s6d_A Putative triosephosphat 99.9 2.9E-23 9.9E-28 175.5 8.0 84 52-135 34-149 (310)
22 2btm_A TIM, protein (triosepho 99.9 3.2E-23 1.1E-27 170.9 7.9 83 53-135 1-95 (252)
23 2jgq_A Triosephosphate isomera 99.9 1.4E-22 4.8E-27 165.4 4.7 83 54-136 1-91 (233)
24 2v5b_A Triosephosphate isomera 99.9 1.6E-22 5.4E-27 166.0 4.7 82 49-135 1-90 (244)
25 1hg3_A Triosephosphate isomera 99.8 9.8E-20 3.3E-24 147.5 6.6 88 49-136 1-98 (225)
26 1w0m_A TIM, triosephosphate is 99.8 5.1E-19 1.8E-23 143.4 5.4 85 52-136 1-95 (226)
27 2h6r_A Triosephosphate isomera 99.5 5.4E-15 1.9E-19 117.7 4.1 80 56-135 2-91 (219)
No 1
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=99.91 E-value=4.3e-25 Score=183.81 Aligned_cols=95 Identities=18% Similarity=0.175 Sum_probs=73.2
Q ss_pred CCCCcchhHhhhhcCCceeEeeecccCCHHHHHHHHHHHhhcc-c-CCCccEEEechHH----HHHHhc-CCee-eeccc
Q 032180 39 RPRRGSSVVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAK-L-EADVGEMMLLLSS----LDAYLV-IRFH-CEHYV 110 (146)
Q Consensus 39 ~~~r~~~~~~m~~~rk~lViGNWKMNgt~aei~eLl~~L~~~~-~-~~~VdVvVaPP~t----v~~~l~-~~I~-GAQNV 110 (146)
.+..+ .-.|..||||||+||||||++.+++.+|++.+.... . ..++||+|||||+ +.+.++ +.|. |||||
T Consensus 14 ~~~~~--~~~~~~Mrk~~i~gNWKMn~t~~~~~~l~~~l~~~~~~~~~~veVvV~PP~~~L~~v~~~~~~~~i~vgAQN~ 91 (272)
T 4g1k_A 14 AQTQG--PGSMSKQRIKRVIGNWKMHGRLSGNQALLTEVAQGAQAVHDNVAIGVCVPFPYLAQAQAQLQGGRVSWGSQDV 91 (272)
T ss_dssp -------------CCCEEEEEECCBCCCHHHHHHHHHHHHHHHTTSCTTEEEEEECCGGGHHHHHHHHTTSSEEEEESCC
T ss_pred hhhcc--CcHHHhCCCCEEEEEhhhCcCHHHHHHHHHHHHhccccccCCceEEEeCCHHHHHHHHHHhcCCCceEEeccc
Confidence 34445 556666899999999999999999999999997754 2 3479999999997 344444 5799 99999
Q ss_pred CccC---CccccchhhhcCC--cEEEEEcc
Q 032180 111 WVYL---LVADVCSILEKDL--VWAILVVN 135 (146)
Q Consensus 111 ~~~~---~g~~~~~~~~~~~--~~~~~~~~ 135 (146)
|+++ .||||||+||||+ .||||||-
T Consensus 92 ~~~~~GAfTGEISa~MLkd~G~~~VIiGHS 121 (272)
T 4g1k_A 92 SAHEQGAYTGEVAAGMVAEFGAAYAIVGHS 121 (272)
T ss_dssp CSSSSBSCTTCCCHHHHHTTTCCEEEESCH
T ss_pred CCCCCCCCcCcCCHHHHHHcCCCEEEECch
Confidence 9986 5999999999999 99999995
No 2
>3th6_A Triosephosphate isomerase; alpha/beta barrel, embryogenesis, glycolysis; 2.40A {Rhipicephalus microplus}
Probab=99.91 E-value=4.5e-25 Score=181.58 Aligned_cols=84 Identities=25% Similarity=0.448 Sum_probs=72.9
Q ss_pred cCCceeEeeecccCCHHHHHHHHHHHhhcccCCCccEEEechHH----HHHHhcCCee-eecccCccC---Cccccchhh
Q 032180 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADVGEMMLLLSS----LDAYLVIRFH-CEHYVWVYL---LVADVCSIL 123 (146)
Q Consensus 52 ~rk~lViGNWKMNgt~aei~eLl~~L~~~~~~~~VdVvVaPP~t----v~~~l~~~I~-GAQNV~~~~---~g~~~~~~~ 123 (146)
+||+||+||||||++.+++.+|++.+.......++||+|||||+ +.+.+++.|. ||||||+++ .||||||+|
T Consensus 3 ~r~~~i~gNwKmn~~~~~~~~~~~~l~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~m 82 (249)
T 3th6_A 3 ARRFCVGGNWKMHGSKNSIRDICNTLKGASLDPNVEVIVACPAPYLDYCRSLLPPSVALAAQNCYKVEQGAFTGEISPGM 82 (249)
T ss_dssp CCCCEEEEECCBCCCHHHHHHHHHHHHTSCCCTTSEEEEEECGGGHHHHHHHSCTTEEEEESCCCSSSSBSCTTCCCHHH
T ss_pred CCCeEEEEEhhhccCHHHHHHHHHHHHhhcccCCceEEEeCcHHHHHHHHHHhccCCEEEeeecCCccCCCcccccCHHH
Confidence 58999999999999999999999998765444579999999997 3344445799 999999986 589999999
Q ss_pred hcCC--cEEEEEcc
Q 032180 124 EKDL--VWAILVVN 135 (146)
Q Consensus 124 ~~~~--~~~~~~~~ 135 (146)
|||+ .||||||-
T Consensus 83 L~d~G~~~ViiGHS 96 (249)
T 3th6_A 83 IKDCGGQWVILGHS 96 (249)
T ss_dssp HHHTTCCEEEESCH
T ss_pred HHHcCCCEEEECch
Confidence 9999 99999995
No 3
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=99.91 E-value=8.4e-25 Score=180.18 Aligned_cols=87 Identities=28% Similarity=0.413 Sum_probs=72.5
Q ss_pred hhhcCCceeEeeecccCCHHHHHHHHHHHhhcccCCCccEEEechHH----HHHHhc-CCee-eecccCccC---Ccccc
Q 032180 49 MASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADVGEMMLLLSS----LDAYLV-IRFH-CEHYVWVYL---LVADV 119 (146)
Q Consensus 49 m~~~rk~lViGNWKMNgt~aei~eLl~~L~~~~~~~~VdVvVaPP~t----v~~~l~-~~I~-GAQNV~~~~---~g~~~ 119 (146)
|.+|||+||+||||||++.+++.+|++.+.....+.++||+|||||+ +.+.++ +.|. |||||| ++ .||||
T Consensus 1 ~~~mr~~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~-~~~GA~TGEi 79 (251)
T 2vxn_A 1 MSAKPQPIAAANWKCNGTTASIEKLVQVFNEHTISHDVQCVVAPTFVHIPLVQAKLRNPKYVISAQNAI-AKSGAFTGEV 79 (251)
T ss_dssp --CCCCCEEEEECCSCCCHHHHHHHHHHHHHSCCCSCCEEEEECCGGGHHHHHHHCCCTTEEEEESCCB-SSCSSCTTCC
T ss_pred CCCCCCCEEEEecccccCHHHHHHHHHHHHhhccccCceEEEECcHHHHHHHHHHhcCCCceEeecccC-CCCCCCcCcC
Confidence 44679999999999999999999999998764333469999999997 344454 4799 999999 76 48999
Q ss_pred chhhhcCC--cEEEEEccc
Q 032180 120 CSILEKDL--VWAILVVNS 136 (146)
Q Consensus 120 ~~~~~~~~--~~~~~~~~~ 136 (146)
||+||||+ .||||||--
T Consensus 80 S~~mL~d~G~~~ViiGHSE 98 (251)
T 2vxn_A 80 SMPILKDIGVHWVILGHSE 98 (251)
T ss_dssp BHHHHHHTTCCEEEESCHH
T ss_pred CHHHHHHcCCCEEEECchh
Confidence 99999999 999999953
No 4
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=99.91 E-value=7.5e-25 Score=182.63 Aligned_cols=90 Identities=26% Similarity=0.405 Sum_probs=76.3
Q ss_pred hHhhhhcCCceeEeeecccCCHHHHHHHHHHHhhcccCCCccEEEechHH----HHHHhcCCee-eecccCccC---Ccc
Q 032180 46 VVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADVGEMMLLLSS----LDAYLVIRFH-CEHYVWVYL---LVA 117 (146)
Q Consensus 46 ~~~m~~~rk~lViGNWKMNgt~aei~eLl~~L~~~~~~~~VdVvVaPP~t----v~~~l~~~I~-GAQNV~~~~---~g~ 117 (146)
.-.|.+||||||+||||||++.+++.+|++.+.....+.++||+|||||+ +.+.+++.|. ||||||+++ .||
T Consensus 16 ~~~~~~mrk~~i~gNWKmn~t~~~~~~l~~~l~~~~~~~~vevvv~Pp~~~L~~v~~~~~~~i~vgAQn~~~~~~GAfTG 95 (275)
T 1mo0_A 16 LYKAGLTRKFFVGGNWKMNGDYASVDGIVTFLNASADNSSVDVVVAPPAPYLAYAKSKLKAGVLVAAQNCYKVPKGAFTG 95 (275)
T ss_dssp CCCCCSCSCEEEEEECCBCCCHHHHHHHHHHHHHSCCCTTEEEEEECCGGGHHHHHHHSCTTEEEEESCCCSSSSBSCTT
T ss_pred hhhhhcCCCCEEEEecccccCHHHHHHHHHHHhhhccccCceEEEeCcHHHHHHHHHHhhCCCeEEeccCCCCCCCCccC
Confidence 55677789999999999999999999999999764333469999999997 3444543499 999999987 489
Q ss_pred ccchhhhcCC--cEEEEEcc
Q 032180 118 DVCSILEKDL--VWAILVVN 135 (146)
Q Consensus 118 ~~~~~~~~~~--~~~~~~~~ 135 (146)
||||+||||+ .||||||-
T Consensus 96 EIS~~mLkd~G~~~ViiGHS 115 (275)
T 1mo0_A 96 EISPAMIKDLGLEWVILGHS 115 (275)
T ss_dssp CCCHHHHHHTTCCEEEESCH
T ss_pred cCCHHHHHHcCCCEEEeCch
Confidence 9999999999 99999995
No 5
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, gluconeogenesis, glycolysis, pentose shunt; 1.60A {Bartonella henselae}
Probab=99.91 E-value=3.8e-25 Score=184.42 Aligned_cols=95 Identities=18% Similarity=0.211 Sum_probs=71.1
Q ss_pred CCCCcchhHhhhhcCCceeEeeecccCCHHHHHHHHHHHhhcccC-C-CccEEEechHH----HHHHhc-CCee-eeccc
Q 032180 39 RPRRGSSVVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLE-A-DVGEMMLLLSS----LDAYLV-IRFH-CEHYV 110 (146)
Q Consensus 39 ~~~r~~~~~~m~~~rk~lViGNWKMNgt~aei~eLl~~L~~~~~~-~-~VdVvVaPP~t----v~~~l~-~~I~-GAQNV 110 (146)
.+..+ .-.|..||||||+||||||++.+++.+|++.+.....+ . ++||+|||||+ +.+.++ +.|. |||||
T Consensus 14 ~~~~~--~~~m~~MRk~~i~gNWKMn~~~~~~~~l~~~l~~~~~~~~~~vevvv~Pp~~~L~~v~~~~~~~~i~vgAQn~ 91 (275)
T 3kxq_A 14 AQTQG--PGSMSPNIRPFIAGNWKMNGTGESLGELRAIAAGISSDLGRLFEALICVPATLLSRAFDILGGENILLGGQNC 91 (275)
T ss_dssp --------------CCCEEEEECCBCCCGGGHHHHHHHHHHHC----CCSEEEEECCTTTHHHHHHHHTTSSSEEEESCC
T ss_pred ccccc--chHhhcCCCCEEEEEhhhCcCHHHHHHHHHHHHhhcccccCCceEEEeCCHHHHHHHHHHhcCCCceEEeccc
Confidence 44555 67788899999999999999999999999999775433 3 79999999997 344444 4789 99999
Q ss_pred CccC---CccccchhhhcCC--cEEEEEcc
Q 032180 111 WVYL---LVADVCSILEKDL--VWAILVVN 135 (146)
Q Consensus 111 ~~~~---~g~~~~~~~~~~~--~~~~~~~~ 135 (146)
|+++ .|||||++||||+ .||||||-
T Consensus 92 ~~~~~GAfTGEIS~~mLkd~G~~~VIiGHS 121 (275)
T 3kxq_A 92 HFDDYGPYTGDISAFMLKEAGASHVIIGHS 121 (275)
T ss_dssp CSSSSBSCTTCCCHHHHHHHTCSEEEESCH
T ss_pred ccccCCCccCcCCHHHHHHcCCCEEEECch
Confidence 9986 5999999999999 99999995
No 6
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=99.91 E-value=1.1e-24 Score=179.13 Aligned_cols=86 Identities=29% Similarity=0.490 Sum_probs=72.5
Q ss_pred hcCCceeEeeecccCCHHHHHHHHHHHhhcccCCCccEEEechHH----HHHHhcCCee-eecccCccC---Cccccchh
Q 032180 51 SSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADVGEMMLLLSS----LDAYLVIRFH-CEHYVWVYL---LVADVCSI 122 (146)
Q Consensus 51 ~~rk~lViGNWKMNgt~aei~eLl~~L~~~~~~~~VdVvVaPP~t----v~~~l~~~I~-GAQNV~~~~---~g~~~~~~ 122 (146)
+|||+||+||||||++.+++.+|++.+.....+.++||+|||||+ +.+.++..|. ||||||+++ .|||||++
T Consensus 2 ~mr~~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~ 81 (248)
T 1r2r_A 2 PSRKFFVGGNWKMNGRKKNLGELITTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPG 81 (248)
T ss_dssp -CCCEEEEEECCBCCCHHHHHHHHHHHHHSCCCTTEEEEEECCGGGHHHHHHHSCTTSEEEESCCCSSSSBSCTTCCCHH
T ss_pred CCCCCEEEEeCCcccCHHHHHHHHHHHHhhccccCceEEEeCcHHHHHHHHHHhhCCceEEeccCCCCCCCCccCccCHH
Confidence 369999999999999999999999999764333469999999997 3444543488 999999987 49999999
Q ss_pred hhcCC--cEEEEEccc
Q 032180 123 LEKDL--VWAILVVNS 136 (146)
Q Consensus 123 ~~~~~--~~~~~~~~~ 136 (146)
||||+ .||||||--
T Consensus 82 mL~d~G~~~ViiGHSE 97 (248)
T 1r2r_A 82 MIKDCGATWVVLGHSE 97 (248)
T ss_dssp HHHHTTCCEEEESCHH
T ss_pred HHHHcCCCEEEECChh
Confidence 99999 999999953
No 7
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=99.91 E-value=1.3e-24 Score=180.75 Aligned_cols=92 Identities=25% Similarity=0.421 Sum_probs=72.8
Q ss_pred CCCCcchhHhhhhcCCceeEeeecccCCHHHHHHHHHHHhhcccCCCccEEEechHH----HHHHh----cCCee-eecc
Q 032180 39 RPRRGSSVVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADVGEMMLLLSS----LDAYL----VIRFH-CEHY 109 (146)
Q Consensus 39 ~~~r~~~~~~m~~~rk~lViGNWKMNgt~aei~eLl~~L~~~~~~~~VdVvVaPP~t----v~~~l----~~~I~-GAQN 109 (146)
.++.| +++| .|||||+||||||++.+++.+|++.+.... ..++||+|||||+ +.+.+ .+.|. ||||
T Consensus 14 ~~~~~--~~~m--~rk~~i~gNWKmn~t~~~~~~l~~~l~~~~-~~~vevvv~Pp~~~L~~v~~~~~~~~~~~i~vgAQn 88 (271)
T 3krs_A 14 AQTQG--PGSM--SRKYFVGGNFKCNGTKESLKTLIDSFKQVE-SSNSEVYVFPTSLHISLVKEFFGNDHPGVFKIGSQN 88 (271)
T ss_dssp -------------CCCCEEEEECCBCCCHHHHHHHHHHHTTCC-CCSSEEEEECCGGGHHHHHHHHCSSSCSCEEECBSC
T ss_pred ccccc--cccc--CCCeEEEEEhhhCcCHHHHHHHHHHHHhcc-cCCceEEEECcHHHHHHHHHHHhhccCCCceEEecc
Confidence 34445 5444 589999999999999999999999998764 4579999999997 44445 34799 9999
Q ss_pred cCccC---CccccchhhhcCC--cEEEEEcc
Q 032180 110 VWVYL---LVADVCSILEKDL--VWAILVVN 135 (146)
Q Consensus 110 V~~~~---~g~~~~~~~~~~~--~~~~~~~~ 135 (146)
||+++ .||||||+||||+ .||||||-
T Consensus 89 ~~~~~~GAfTGEIS~~mLkd~G~~~ViiGHS 119 (271)
T 3krs_A 89 ISCTGNGAFTGEVSCEMLKDMDVDCSLVGHS 119 (271)
T ss_dssp CCSSCSBSCTTCCCHHHHHHTTCCEEEESCH
T ss_pred cccccCCCccccccHHHHHHcCCCEEEECch
Confidence 99986 5999999999999 99999995
No 8
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=99.90 E-value=1.9e-24 Score=178.38 Aligned_cols=84 Identities=32% Similarity=0.459 Sum_probs=72.2
Q ss_pred cCCceeEeeeccc-CCHHHHHHHHHHHhhcccCCCccEEEechHH----HHHHhcCCee-eecccCccC---Cccccchh
Q 032180 52 SNKFFVGGNWKCN-GTKESITKLVSDLNDAKLEADVGEMMLLLSS----LDAYLVIRFH-CEHYVWVYL---LVADVCSI 122 (146)
Q Consensus 52 ~rk~lViGNWKMN-gt~aei~eLl~~L~~~~~~~~VdVvVaPP~t----v~~~l~~~I~-GAQNV~~~~---~g~~~~~~ 122 (146)
|||+||+|||||| ++.+++.+|++.+.....+.++||+|||||+ +.+.+.+.|. ||||||+++ .|||||++
T Consensus 4 mr~~~i~gNWKmn~~~~~~~~~l~~~l~~~~~~~~~ev~v~Pp~~~L~~v~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~ 83 (255)
T 3qst_A 4 MRTFFVGGNWKANPKTVQEAEKLVEMLNGAKVEGNVEVVVAAPFVFLPTLQQKLRKDWKVSAENVFTKPNGAFTGEVTVP 83 (255)
T ss_dssp -CCCEEEEECCSCCSSHHHHHHHHHHHHTCCCCSSCEEEEECCGGGHHHHHHHSCTTSEEEESCCCSSSSSSCTTCCCHH
T ss_pred CCCcEEEEEhhcccCCHHHHHHHHHHHHhhcccCCceEEEeCCHHHHHHHHHHhccCCeEEecccCCCCCCCccCccCHH
Confidence 6899999999999 9999999999999865444469999999997 3344446788 999999986 58999999
Q ss_pred hhcCC--cEEEEEcc
Q 032180 123 LEKDL--VWAILVVN 135 (146)
Q Consensus 123 ~~~~~--~~~~~~~~ 135 (146)
||||+ .||||||-
T Consensus 84 mL~d~G~~~ViiGHS 98 (255)
T 3qst_A 84 MIKSFGIEWTILGHS 98 (255)
T ss_dssp HHHTTTCCEEEESCH
T ss_pred HHHHcCCCEEEECch
Confidence 99999 99999995
No 9
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=99.90 E-value=2.2e-24 Score=178.21 Aligned_cols=87 Identities=18% Similarity=0.280 Sum_probs=72.8
Q ss_pred hhcCCceeEeeecccCCHHHHHHHHHHHhhcccCCCccEEEechHH----HHHHhc-CCee-eecccCccC---Cccccc
Q 032180 50 ASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADVGEMMLLLSS----LDAYLV-IRFH-CEHYVWVYL---LVADVC 120 (146)
Q Consensus 50 ~~~rk~lViGNWKMNgt~aei~eLl~~L~~~~~~~~VdVvVaPP~t----v~~~l~-~~I~-GAQNV~~~~---~g~~~~ 120 (146)
|+|||+||+||||||++.+++.+|++.+.......++||+|||||+ +.+.++ +.|. ||||||+++ .|||||
T Consensus 1 m~~r~~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~GAfTGEiS 80 (257)
T 2yc6_A 1 MPARRPFIGGNFKCNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANTSKQLRIAAQNVYLEGNGAWTGETS 80 (257)
T ss_dssp -CCCCCEEEEECCSCCCHHHHHHHHHHHHTSCCCTTSEEEEECCGGGHHHHHHHCCCSSCEEEESCCCSSCSSSCTTCCC
T ss_pred CCCCCeEEEEECccccCHHHHHHHHHHHhhcccccCceEEEeCCHHHHHHHHHHhCCCCceEEeccCCCCCCcCccCccC
Confidence 3479999999999999999999999999761122569999999997 344454 4799 999999986 599999
Q ss_pred hhhhcCC--cEEEEEccc
Q 032180 121 SILEKDL--VWAILVVNS 136 (146)
Q Consensus 121 ~~~~~~~--~~~~~~~~~ 136 (146)
|+||||+ .||||||--
T Consensus 81 ~~mL~d~G~~~ViiGHSE 98 (257)
T 2yc6_A 81 VEMLQDMGLKHVIVGHSE 98 (257)
T ss_dssp HHHHHHTTCCEEEESCHH
T ss_pred HHHHHHcCCCEEEECchh
Confidence 9999999 999999953
No 10
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=99.90 E-value=2.4e-24 Score=177.32 Aligned_cols=85 Identities=22% Similarity=0.381 Sum_probs=72.2
Q ss_pred hcCCceeEeeecccCCHHHHHHHHHHHhhcccCCCccEEEechHH----HHHHhc-CCee-eecccCccC---Cccccch
Q 032180 51 SSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADVGEMMLLLSS----LDAYLV-IRFH-CEHYVWVYL---LVADVCS 121 (146)
Q Consensus 51 ~~rk~lViGNWKMNgt~aei~eLl~~L~~~~~~~~VdVvVaPP~t----v~~~l~-~~I~-GAQNV~~~~---~g~~~~~ 121 (146)
.|||+||+||||||++.+++.+|++.+.....+.++||+|||||+ +.+.++ +.|. |||||| ++ .||||||
T Consensus 2 ~mr~~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~-~~~GA~TGEiS~ 80 (250)
T 2j27_A 2 SKPQPIAAANWKCNGSQQSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNAI-AKSGAFTGEVSL 80 (250)
T ss_dssp CCCCCEEEEECCBCCCHHHHHHHHHHHHTCCCCSCCEEEEECCGGGHHHHHHHCCCTTEEEEESCCB-SSCBSCTTCCBH
T ss_pred CCCCcEEEEECccccCHHHHHHHHHHHHhhccccCceEEEeCCHHHHHHHHHHhcCCCceEeecccC-CCCCCcccccCH
Confidence 479999999999999999999999998764333469999999997 344444 4799 999999 76 4899999
Q ss_pred hhhcCC--cEEEEEccc
Q 032180 122 ILEKDL--VWAILVVNS 136 (146)
Q Consensus 122 ~~~~~~--~~~~~~~~~ 136 (146)
+||||+ .||||||--
T Consensus 81 ~mL~d~G~~~ViiGHSE 97 (250)
T 2j27_A 81 PILKDFGVNWIVLGHSE 97 (250)
T ss_dssp HHHHHTTCCEEEESCHH
T ss_pred HHHHHcCCCEEEECchh
Confidence 999999 999999953
No 11
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=99.90 E-value=2.9e-24 Score=176.70 Aligned_cols=84 Identities=29% Similarity=0.487 Sum_probs=71.2
Q ss_pred cCCceeEeeecccCCHHHHHHHHHHHhhcccC-CCccEEEechHH----HHHHhcCCee-eecccCccC---Cccccchh
Q 032180 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKLE-ADVGEMMLLLSS----LDAYLVIRFH-CEHYVWVYL---LVADVCSI 122 (146)
Q Consensus 52 ~rk~lViGNWKMNgt~aei~eLl~~L~~~~~~-~~VdVvVaPP~t----v~~~l~~~I~-GAQNV~~~~---~g~~~~~~ 122 (146)
|||+||+||||||++.+++.+|++.+...... .++||+|||||+ +.+.++++|. ||||||+++ .||||||+
T Consensus 2 mr~~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~ 81 (248)
T 1o5x_A 2 ARKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHYDHTRKLLQSKFSTGIQNVSKFGNGSYTGEVSAE 81 (248)
T ss_dssp -CCEEEEEECCBCCCHHHHHHHHHHHHTSCCCTTTEEEEEECCGGGHHHHHHHSCTTSEEEESCCCSSCSBSCTTCCCHH
T ss_pred CCCCEEEEecCcccCHHHHHHHHHHHHhhcccccCceEEEeCcHHHHHHHHHHhccCCeEEeccCCCCCCCCcCCcCCHH
Confidence 68999999999999999999999998763322 469999999997 3344445788 999999986 59999999
Q ss_pred hhcCC--cEEEEEcc
Q 032180 123 LEKDL--VWAILVVN 135 (146)
Q Consensus 123 ~~~~~--~~~~~~~~ 135 (146)
||||+ .||||||-
T Consensus 82 mL~d~G~~~ViiGHS 96 (248)
T 1o5x_A 82 IAKDLNIEYVIIGHF 96 (248)
T ss_dssp HHHHTTCCEEEECCH
T ss_pred HHHHcCCCEEEeCCh
Confidence 99999 99999995
No 12
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=99.90 E-value=3.1e-24 Score=177.57 Aligned_cols=84 Identities=24% Similarity=0.449 Sum_probs=72.0
Q ss_pred cCCceeEeeecccCCHHHHHHHHHHHhhcccCCCccEEEechHH----HHHHhcCCee-eecccCccC---Cccccchhh
Q 032180 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADVGEMMLLLSS----LDAYLVIRFH-CEHYVWVYL---LVADVCSIL 123 (146)
Q Consensus 52 ~rk~lViGNWKMNgt~aei~eLl~~L~~~~~~~~VdVvVaPP~t----v~~~l~~~I~-GAQNV~~~~---~g~~~~~~~ 123 (146)
+||+||+||||||++.+++.+|++.+.......++||+|||||+ +.+.++..|. ||||||+++ .||||||+|
T Consensus 2 ~r~~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~m 81 (259)
T 2i9e_A 2 ARKFVVGGNWKMNGDKKQINEIIGFLKSGPLNQDTEVVVGVPAIYLELVRTCVPASIGVAAQNCYKVPKGAFTGEISPAM 81 (259)
T ss_dssp CCCEEEEEECCBCCCHHHHHHHHHHHHHSCCCTTEEEEEEECGGGHHHHHHHSCTTSEEEESCCCSSSSBSCTTCCCHHH
T ss_pred CCCcEEEEecccccCHHHHHHHHHHHhhhcccCCeeEEEeCCHHHHHHHHHHhhCCCeEEeccCCCCCCCCccCccCHHH
Confidence 58999999999999999999999998764333569999999997 3444544688 999999986 489999999
Q ss_pred hcCC--cEEEEEcc
Q 032180 124 EKDL--VWAILVVN 135 (146)
Q Consensus 124 ~~~~--~~~~~~~~ 135 (146)
|||+ .||||||-
T Consensus 82 L~d~G~~~ViiGHS 95 (259)
T 2i9e_A 82 IKDVGADWVILGHS 95 (259)
T ss_dssp HHHTTCCEEEESCH
T ss_pred HHHcCCCEEEECch
Confidence 9999 99999995
No 13
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=99.90 E-value=3.5e-24 Score=176.16 Aligned_cols=85 Identities=25% Similarity=0.366 Sum_probs=72.6
Q ss_pred cCCceeEeeecccCCHHHHHHHHHHHhhcccCCCccEEEechHH----HHHHhc-CCee-eecccCccC---Cccccchh
Q 032180 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADVGEMMLLLSS----LDAYLV-IRFH-CEHYVWVYL---LVADVCSI 122 (146)
Q Consensus 52 ~rk~lViGNWKMNgt~aei~eLl~~L~~~~~~~~VdVvVaPP~t----v~~~l~-~~I~-GAQNV~~~~---~g~~~~~~ 122 (146)
|||+||+||||||++.+++.+|++.+.....+.++||+|||||+ +.+.++ ++|. ||||||+++ .||||||+
T Consensus 1 Mr~~~i~gNwKmn~~~~~~~~~~~~l~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~ 80 (247)
T 1ney_A 1 ARTFFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVKKPQVTVGAQNAYLKASGAFTGENSVD 80 (247)
T ss_dssp CCCEEEEEECCBCCCHHHHHHHHHHHHHSCCCTTEEEEEECCGGGHHHHHHHCCCTTEEEEESCCCSSSSBSCTTCCCHH
T ss_pred CCCCEEEEECCcccCHHHHHHHHHHHHhhccccCceEEEeCcHHHHHHHHHHhcCCCceEEeccCCCCCCCCccCccCHH
Confidence 58999999999999999999999998764333469999999997 344444 4799 999999986 59999999
Q ss_pred hhcCC--cEEEEEccc
Q 032180 123 LEKDL--VWAILVVNS 136 (146)
Q Consensus 123 ~~~~~--~~~~~~~~~ 136 (146)
||||+ .||||||--
T Consensus 81 mL~d~G~~~ViiGHSE 96 (247)
T 1ney_A 81 QIKDVGAKYVILGHSE 96 (247)
T ss_dssp HHHHTTCCEEEESCHH
T ss_pred HHHHcCCCEEEECChh
Confidence 99999 999999953
No 14
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=99.90 E-value=3.1e-24 Score=177.54 Aligned_cols=86 Identities=29% Similarity=0.427 Sum_probs=71.0
Q ss_pred hhcCCceeEeeecccCCHHHHHHHHHHHh---hcccCCCccEEEechHH----HHHHhc-CC----ee-eecccCccC--
Q 032180 50 ASSNKFFVGGNWKCNGTKESITKLVSDLN---DAKLEADVGEMMLLLSS----LDAYLV-IR----FH-CEHYVWVYL-- 114 (146)
Q Consensus 50 ~~~rk~lViGNWKMNgt~aei~eLl~~L~---~~~~~~~VdVvVaPP~t----v~~~l~-~~----I~-GAQNV~~~~-- 114 (146)
|+|||+||+||||||++.+++.+|++.+. ......++||+|||||+ +.+.++ +. |. |||||| ++
T Consensus 1 ~~mr~~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~~~~~i~vgAQn~~-~~~G 79 (261)
T 1m6j_A 1 MGAGKFVVGGNWKCNGTLASIETLTKGVAASVDAELAKKVEVIVGVPFIYIPKVQQILAGEANGANILVSAENAW-TKSG 79 (261)
T ss_dssp -CCSCEEEEEECCBCCCHHHHHHHHHHHHHHCCHHHHTTEEEEEEECGGGHHHHHHHHHTSTTGGGEEEEESCCB-SSSB
T ss_pred CCCCCcEEEEEcccccCHHHHHHHHHHHHhhhhhccccCceEEEeCCHHHHHHHHHHhcCCCCCceeEEEeccCC-CCCC
Confidence 34799999999999999999999999986 43222469999999997 334443 34 99 999999 76
Q ss_pred -CccccchhhhcCC--cEEEEEccc
Q 032180 115 -LVADVCSILEKDL--VWAILVVNS 136 (146)
Q Consensus 115 -~g~~~~~~~~~~~--~~~~~~~~~ 136 (146)
.||||||+||||+ .||||||--
T Consensus 80 AfTGEiS~~mL~d~G~~~ViiGHSE 104 (261)
T 1m6j_A 80 AYTGEVHVGMLVDCQVPYVILGHSE 104 (261)
T ss_dssp SCTTCCBHHHHHHTTCCEEEESCHH
T ss_pred CccccCCHHHHHHcCCCEEEECchh
Confidence 4899999999999 999999953
No 15
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=99.90 E-value=4.9e-24 Score=175.84 Aligned_cols=83 Identities=14% Similarity=0.225 Sum_probs=71.3
Q ss_pred cCCceeEeeecccCCHHHHHHHHHHHhhccc-CCCccEEEechHH----HHHHh---c-CCee-eecccCccC---Cccc
Q 032180 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKL-EADVGEMMLLLSS----LDAYL---V-IRFH-CEHYVWVYL---LVAD 118 (146)
Q Consensus 52 ~rk~lViGNWKMNgt~aei~eLl~~L~~~~~-~~~VdVvVaPP~t----v~~~l---~-~~I~-GAQNV~~~~---~g~~ 118 (146)
|||+||+||||||++.+++.+|++.+ .... ..++||+|||||+ +.+.+ + +.|. ||||||+++ .|||
T Consensus 2 Mrk~~i~gNwKmn~~~~~~~~l~~~l-~~~~~~~~~ev~v~Pp~~~L~~v~~~~~~~~~~~i~vgAQn~~~~~~GA~TGE 80 (254)
T 3m9y_A 2 MRTPIIAGNWKMNKTVQEAKDFVNAL-PTLPDSKEVESVICAPAIQLDALTTAVKEGKAQGLEIGAQNTYFEDNGAFTGE 80 (254)
T ss_dssp CCCCEEEEECCBCCCHHHHHHHHHHC-CCCCCTTTCEEEEEECHHHHHHHHHHHHTTSSTTCEEEESCCCSSSSBSCTTC
T ss_pred CCCCEEEEEhhhCcCHHHHHHHHHHH-HhccccCCceEEEECCHHHHHHHHHHHhhcCCCcceEEecccccccCCCccCc
Confidence 68999999999999999999999998 4322 2469999999997 34445 4 4799 999999986 5999
Q ss_pred cchhhhcCC--cEEEEEcc
Q 032180 119 VCSILEKDL--VWAILVVN 135 (146)
Q Consensus 119 ~~~~~~~~~--~~~~~~~~ 135 (146)
|||+||||+ .||||||-
T Consensus 81 iS~~mL~d~G~~~ViiGHS 99 (254)
T 3m9y_A 81 TSPVALADLGVKYVVIGHS 99 (254)
T ss_dssp CCHHHHHHTTCCEEEESCH
T ss_pred CCHHHHHHcCCCEEEECcc
Confidence 999999999 99999995
No 16
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=99.90 E-value=7.2e-24 Score=175.02 Aligned_cols=85 Identities=15% Similarity=0.256 Sum_probs=72.3
Q ss_pred cCCceeEeeecccCCHHHHHHHHHHHhhcccC-CCccEEEechHH----HHHHhc-CCee-eecccCccC---Cccccch
Q 032180 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKLE-ADVGEMMLLLSS----LDAYLV-IRFH-CEHYVWVYL---LVADVCS 121 (146)
Q Consensus 52 ~rk~lViGNWKMNgt~aei~eLl~~L~~~~~~-~~VdVvVaPP~t----v~~~l~-~~I~-GAQNV~~~~---~g~~~~~ 121 (146)
|||+||+||||||++.+++.+|++.+...... .++||+|||||+ +.+.++ +.|. ||||||+++ .|||||+
T Consensus 2 Mrk~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~ 81 (255)
T 1b9b_A 2 TRKLILAGNWKMHKTISEAKKFVSLLVNELHDVKEFEIVVCPPFTALSEVGEILSGRNIKLGAQNVFYEDQGAFTGEISP 81 (255)
T ss_dssp CCSCEEEEECCBCCCHHHHHHHHHHHHHHTSSCCSSEEEEECCGGGHHHHHHHHTTSSSEEEESCCCSSSSBSCTTCCCH
T ss_pred CCCCEEEEeCCcCcCHHHHHHHHHHHHhhcccccCeeEEEeCcHHHHHHHHHHhcCCCceEeeccCCCCCCCCccCcCCH
Confidence 58999999999999999999999998653322 469999999997 344444 4799 999999986 5999999
Q ss_pred hhhcCC--cEEEEEccc
Q 032180 122 ILEKDL--VWAILVVNS 136 (146)
Q Consensus 122 ~~~~~~--~~~~~~~~~ 136 (146)
+||||+ .||||||--
T Consensus 82 ~mL~d~G~~~ViiGHSE 98 (255)
T 1b9b_A 82 LMLQEIGVEYVIVGHSE 98 (255)
T ss_dssp HHHHTTTCCEEEESCHH
T ss_pred HHHHHcCCCEEEECchh
Confidence 999999 999999953
No 17
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=99.90 E-value=6.6e-24 Score=174.76 Aligned_cols=85 Identities=18% Similarity=0.187 Sum_probs=71.5
Q ss_pred cCCceeEeeecccCCHHHHHHHHHHHhhcccCCCccEEEechHH----HHHHhc-CCee-eecccCccC---Cccccchh
Q 032180 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADVGEMMLLLSS----LDAYLV-IRFH-CEHYVWVYL---LVADVCSI 122 (146)
Q Consensus 52 ~rk~lViGNWKMNgt~aei~eLl~~L~~~~~~~~VdVvVaPP~t----v~~~l~-~~I~-GAQNV~~~~---~g~~~~~~ 122 (146)
|||+||+||||||++.+++.+|++.+.......++||+|||||+ +.+.++ +.|. ||||||+++ .||||||+
T Consensus 1 Mr~~~i~gNwKmn~~~~~~~~~~~~l~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~ 80 (250)
T 1yya_A 1 MRRVLVAGNWKMHKTPSEARVWFAELKRLLPPLQSEAAVLPAFPILPVAKEVLAETQVGYGAQDVSAHKEGAYTGEVSAR 80 (250)
T ss_dssp CCCCEEEEECCBCCCHHHHHHHHHHHHHHCCCCSSEEEEECCGGGHHHHHHHHTTSSCEEEESCCCSSSSBSCTTCCCHH
T ss_pred CCCCEEEEeCccccCHHHHHHHHHHHHhhccccCceEEEeCCHHHHHHHHHHhcCCCCeEEeccCCCCCCCCccCcCCHH
Confidence 58999999999999999999999998763222129999999997 344454 4799 999999986 59999999
Q ss_pred hhcCC--cEEEEEccc
Q 032180 123 LEKDL--VWAILVVNS 136 (146)
Q Consensus 123 ~~~~~--~~~~~~~~~ 136 (146)
||||+ .||||||--
T Consensus 81 mL~d~G~~~ViiGHSE 96 (250)
T 1yya_A 81 MLSDLGCRYAIVGHSE 96 (250)
T ss_dssp HHHHTTCSEEEESCHH
T ss_pred HHHHcCCCEEEeCchh
Confidence 99999 999999953
No 18
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium tuberculosis} SCOP: c.1.1.0 PDB: 3tao_A* 3gvg_A
Probab=99.90 E-value=4.7e-24 Score=177.13 Aligned_cols=84 Identities=17% Similarity=0.194 Sum_probs=70.6
Q ss_pred cCCceeEeeecccCCHHHHHHHHHHHhhcccCC---CccEEEechHH----HHHHhc---CCee-eecccCccC---Ccc
Q 032180 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKLEA---DVGEMMLLLSS----LDAYLV---IRFH-CEHYVWVYL---LVA 117 (146)
Q Consensus 52 ~rk~lViGNWKMNgt~aei~eLl~~L~~~~~~~---~VdVvVaPP~t----v~~~l~---~~I~-GAQNV~~~~---~g~ 117 (146)
+|||||+||||||++.+++.+|++.+.....+. ++||+|||||+ +.+.++ ..|. ||||||+++ .||
T Consensus 2 ~rk~~i~gNWKMn~~~~~~~~l~~~l~~~~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~~~i~vgAQn~~~~~~GAfTG 81 (267)
T 3ta6_A 2 SRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYTG 81 (267)
T ss_dssp -CCCEEEEECCBCCCHHHHHHHHHHHHHHSCGGGGGTCEEEEECCGGGHHHHHHHHHHTTCSCEEEESCCCSSSSBSCTT
T ss_pred CCCcEEEEEhhhccCHHHHHHHHHHHHHhccccccCCceEEEECCHHHHHHHHHHhcCCCCceEEEecccCCCCCCCccC
Confidence 388999999999999999999999987643322 68999999997 334443 2589 999999986 599
Q ss_pred ccchhhhcCC--cEEEEEcc
Q 032180 118 DVCSILEKDL--VWAILVVN 135 (146)
Q Consensus 118 ~~~~~~~~~~--~~~~~~~~ 135 (146)
|||++||||+ .||||||-
T Consensus 82 EIS~~mLkd~G~~~ViiGHS 101 (267)
T 3ta6_A 82 DVSGAFLAKLGCSYVVVGHS 101 (267)
T ss_dssp CCCHHHHHHTTCCEEEESCH
T ss_pred cccHHHHHHcCCCEEEEcch
Confidence 9999999999 99999995
No 19
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=99.89 E-value=6.2e-24 Score=175.37 Aligned_cols=85 Identities=20% Similarity=0.248 Sum_probs=72.2
Q ss_pred cCCceeEeeecccCCHHHHHHHHHHHhhccc-CCCccEEEechHH----HHHHhc-CCee-eecccCccC---Cccccch
Q 032180 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKL-EADVGEMMLLLSS----LDAYLV-IRFH-CEHYVWVYL---LVADVCS 121 (146)
Q Consensus 52 ~rk~lViGNWKMNgt~aei~eLl~~L~~~~~-~~~VdVvVaPP~t----v~~~l~-~~I~-GAQNV~~~~---~g~~~~~ 121 (146)
|||+||+||||||++.+++.+|++.+..... ..++||+|||||+ +.+.++ +.|. ||||||+++ .||||||
T Consensus 1 Mrk~~i~gNwKmn~~~~~~~~~~~~l~~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~ 80 (255)
T 1tre_A 1 MRHPLVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIMLGAQNVNLNLSGAFTGETSA 80 (255)
T ss_dssp CCCCEEEEECCBCCCHHHHHHHHHHHHHHHTTCCSCEEEEECCTTTHHHHHHHHTTSSEEEEESCCCSCSSBSCTTCCCH
T ss_pred CCCCEEEEecccccCHHHHHHHHHHHHhhcccccCeeEEEeCcHHHHHHHHHHhcCCCCeEeeccCCCCCCCCcCCcCCH
Confidence 5899999999999999999999999865322 2469999999997 344454 4799 999999986 5999999
Q ss_pred hhhcCC--cEEEEEccc
Q 032180 122 ILEKDL--VWAILVVNS 136 (146)
Q Consensus 122 ~~~~~~--~~~~~~~~~ 136 (146)
+||||+ .||||||--
T Consensus 81 ~mL~d~G~~~ViiGHSE 97 (255)
T 1tre_A 81 AMLKDIGAQYIIIGHSE 97 (255)
T ss_dssp HHHHHHTCCEEEESCHH
T ss_pred HHHHHcCCCEEEECccc
Confidence 999999 999999953
No 20
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=99.89 E-value=8.8e-24 Score=174.50 Aligned_cols=84 Identities=20% Similarity=0.214 Sum_probs=70.9
Q ss_pred cCCceeEeeecccCCHHHHHHHHHHHhhccc-CCCccEEEechHH----HHHHhc---CCee-eecccCccC---Ccccc
Q 032180 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKL-EADVGEMMLLLSS----LDAYLV---IRFH-CEHYVWVYL---LVADV 119 (146)
Q Consensus 52 ~rk~lViGNWKMNgt~aei~eLl~~L~~~~~-~~~VdVvVaPP~t----v~~~l~---~~I~-GAQNV~~~~---~g~~~ 119 (146)
|||+||+||||||++.+++.+|++.+..... ..++||+|||||+ +.+.++ +.|. ||||||+++ .||||
T Consensus 1 mr~~~i~gNwKmn~~~~~~~~~~~~l~~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~~~i~vgAQn~~~~~~GA~TGEi 80 (256)
T 1aw2_A 1 MRHPVVMGNWKLNGSKEMVVDLLNGLNAELEGVTGVDVAVAPPALFVDLAERTLTEAGSAIILGAQNTDLNNSGAFTGDM 80 (256)
T ss_dssp -CCCEEEEECCBCCCHHHHHHHHHHHHHHTTTCCSSEEEEECCGGGHHHHHHHHHHHTCCCEEEESCCCSCSSBSCTTCC
T ss_pred CCCCEEEEEcccccCHHHHHHHHHHHHhhcccccCeeEEEeCcHHHHHHHHHHHhCCCCCceEEeccCCCCCCCCccCcc
Confidence 5899999999999999999999999865322 2469999999997 334343 5799 999999986 59999
Q ss_pred chhhhcCC--cEEEEEcc
Q 032180 120 CSILEKDL--VWAILVVN 135 (146)
Q Consensus 120 ~~~~~~~~--~~~~~~~~ 135 (146)
|++||||+ .||||||-
T Consensus 81 S~~mL~d~G~~~ViiGHS 98 (256)
T 1aw2_A 81 SPAMLKEFGATHIIIGHS 98 (256)
T ss_dssp CHHHHHHHTCCEEEESCH
T ss_pred CHHHHHHcCCCEEEECch
Confidence 99999999 99999995
No 21
>3s6d_A Putative triosephosphate isomerase; seattle structural genomics center for infectious disease, S pathogenic fungus, eukaryote; 2.20A {Coccidioides immitis RS}
Probab=99.88 E-value=2.9e-23 Score=175.50 Aligned_cols=84 Identities=7% Similarity=-0.068 Sum_probs=70.6
Q ss_pred cCCceeEeeecccCCHHHHHHHHHHHhhccc-------CCCccEEEechHH----HHHHh---------------cCCee
Q 032180 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKL-------EADVGEMMLLLSS----LDAYL---------------VIRFH 105 (146)
Q Consensus 52 ~rk~lViGNWKMNgt~aei~eLl~~L~~~~~-------~~~VdVvVaPP~t----v~~~l---------------~~~I~ 105 (146)
|||+||+||||||++.+++.+|+++|..... ..++||+|||||+ +.+.+ .+.|.
T Consensus 34 mrk~li~gNWKMn~t~~~~~~~~~~l~~~l~~~~~~~~~~~vevvV~Ppf~~L~~v~~~l~~~~~~~~~~~~~~~~~~i~ 113 (310)
T 3s6d_A 34 LPKTLLIISLKMYFTPSRTIDYIQGLLEPRNDIIRQENRSRLLLALIPDFLTIYPCSEAIKEFESNLAAPQDADTPPPLL 113 (310)
T ss_dssp CCSEEEEEECTTCCCHHHHHHHHHHHHCGGGCCSCGGGTTTEEEEEECCGGGHHHHHHHHHHHHTTSCCC------CSSE
T ss_pred ccCCEEEEEccccCCHHHHHHHHHHHHHHHhhcccccccCCceEEEECCHHHHHHHHHHHhhccccccccccccCCCcce
Confidence 7999999999999999999999999865422 1368999999997 33333 24789
Q ss_pred -eecccCccC---CccccchhhhcCC--cEEEEEcc
Q 032180 106 -CEHYVWVYL---LVADVCSILEKDL--VWAILVVN 135 (146)
Q Consensus 106 -GAQNV~~~~---~g~~~~~~~~~~~--~~~~~~~~ 135 (146)
||||||+++ .|||||++||||+ .||||||-
T Consensus 114 vgAQn~~~~~~GAfTGEISa~mLkd~G~~~ViiGHS 149 (310)
T 3s6d_A 114 LGAQDCFWDSLGPYTGEISPVCLRDMNVSIVELGHA 149 (310)
T ss_dssp EEESCCCSSSSSSCTTCCCHHHHHHTTCCEEEESCH
T ss_pred EEeccccccCCCCccccCCHHHHHHcCCCEEEeccc
Confidence 999999986 5999999999999 99999995
No 22
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=99.88 E-value=3.2e-23 Score=170.90 Aligned_cols=83 Identities=22% Similarity=0.257 Sum_probs=70.7
Q ss_pred CCceeEeeecccCCHHHHHHHHHHHhhcccC-CCccEEEechHH----HHHHhc-CCee-eecccCccC---Cccccchh
Q 032180 53 NKFFVGGNWKCNGTKESITKLVSDLNDAKLE-ADVGEMMLLLSS----LDAYLV-IRFH-CEHYVWVYL---LVADVCSI 122 (146)
Q Consensus 53 rk~lViGNWKMNgt~aei~eLl~~L~~~~~~-~~VdVvVaPP~t----v~~~l~-~~I~-GAQNV~~~~---~g~~~~~~ 122 (146)
||+||+||||||++.+++.+|++.+...... .++||+|||||+ +.+.++ ++|. ||||||+++ .||||||+
T Consensus 1 r~~~i~gNwKmn~~~~~~~~~~~~l~~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~ 80 (252)
T 2btm_A 1 RKPIIAGNWKMNGTLAEAVQFVEDVKGHVPPADEVISVVCAPFLFLDRLVQAADGTDLKIGAQTMHFADQGAYTGEVSPV 80 (252)
T ss_dssp CCCEEEEECCBCCCHHHHHHHHHHHTTTSCCTTTCEEEEEECGGGHHHHHHHHTTSSEEEEESCCCSSSSBSCTTCCCHH
T ss_pred CCcEEEEEcccccCHHHHHHHHHHHHhhcccccCeeEEEECcHHHHHHHHHHhcCCCceEEeccCCCCCCCCcCCcCCHH
Confidence 5799999999999999999999998653322 369999999997 344444 4799 999999986 59999999
Q ss_pred hhcCC--cEEEEEcc
Q 032180 123 LEKDL--VWAILVVN 135 (146)
Q Consensus 123 ~~~~~--~~~~~~~~ 135 (146)
||||+ .||||||-
T Consensus 81 mL~d~G~~~ViiGHS 95 (252)
T 2btm_A 81 MLKDLGVTYVILGHS 95 (252)
T ss_dssp HHHHHTCCEEEESCH
T ss_pred HHHHcCCCEEEeCch
Confidence 99999 99999995
No 23
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=99.86 E-value=1.4e-22 Score=165.39 Aligned_cols=83 Identities=8% Similarity=-0.041 Sum_probs=69.0
Q ss_pred CceeEeeecccCCHHHHHHHHHHHhhccc-CCCccEEEechHH-HHHHhcCCee-eecccCccC---CccccchhhhcCC
Q 032180 54 KFFVGGNWKCNGTKESITKLVSDLNDAKL-EADVGEMMLLLSS-LDAYLVIRFH-CEHYVWVYL---LVADVCSILEKDL 127 (146)
Q Consensus 54 k~lViGNWKMNgt~aei~eLl~~L~~~~~-~~~VdVvVaPP~t-v~~~l~~~I~-GAQNV~~~~---~g~~~~~~~~~~~ 127 (146)
+|||+||||||++.+++.+|++.+..... ..++||+|||||+ +.....++|. ||||||+++ .||||||+||||+
T Consensus 1 ~~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~~vev~v~Pp~~~L~~v~~~~i~vgAQn~~~~~~GAfTGEiS~~mL~d~ 80 (233)
T 2jgq_A 1 TKIAMANFKSAMPIFKSHAYLKELEKTLKPQHFDRVFVFPDFFGLLPNSFLHFTLGVQNAYPRDCGAFTGEITSKHLEEL 80 (233)
T ss_dssp CCEEEEECTBCSCHHHHHHHHHHHHHHSCGGGTTTEEEECCTTTCCCSCCSSSEECBSCCBSSSSBSCTTCCBHHHHHHT
T ss_pred CcEEEEECCcCcCHHHHHHHHHHHHhhcccccCceEEEeCCHHHHHHhcCCCceEEeccCCCCCCCCccCccCHHHHHHc
Confidence 47999999999999999999999865322 2369999999997 3222245788 999999986 5999999999999
Q ss_pred --cEEEEEccc
Q 032180 128 --VWAILVVNS 136 (146)
Q Consensus 128 --~~~~~~~~~ 136 (146)
.||||||--
T Consensus 81 G~~~ViiGHSE 91 (233)
T 2jgq_A 81 KIHTLLIGHSE 91 (233)
T ss_dssp TCCEEEECCHH
T ss_pred CCCEEEeCchh
Confidence 999999953
No 24
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=99.86 E-value=1.6e-22 Score=165.98 Aligned_cols=82 Identities=27% Similarity=0.358 Sum_probs=63.4
Q ss_pred hhhcCCceeEeeecccCCHHHHHHHHHHHhhcccCCCccEEEechHH----HHHHhc-CCee-eecccCccCCccccchh
Q 032180 49 MASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADVGEMMLLLSS----LDAYLV-IRFH-CEHYVWVYLLVADVCSI 122 (146)
Q Consensus 49 m~~~rk~lViGNWKMNgt~aei~eLl~~L~~~~~~~~VdVvVaPP~t----v~~~l~-~~I~-GAQNV~~~~~g~~~~~~ 122 (146)
|..|||+||+||||||++.+++.+|++.+.......++||+|||||+ +.+.++ +.|. ||||||+++. |+
T Consensus 1 m~~mrk~~i~gNWKmn~~~~~~~~l~~~l~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~-----~~ 75 (244)
T 2v5b_A 1 MASKPQPIAAANWKCNGSESLLVPLIETLNAATFDHDVQCVVAPTFLHIPMTKARLTNPKFQIAAQNAGNADA-----LA 75 (244)
T ss_dssp --CCCCCEEEEEECC-----CCHHHHHHHHHCCCCSCCEEEEEECGGGHHHHHHHCCCTTEEEEESCCCCHHH-----HH
T ss_pred CCCCCCcEEEEECCcccCHHHHHHHHHHHHhhccccCceEEEeCcHHHHHHHHHHhcCCCceEEeccCCCCCC-----HH
Confidence 44579999999999999999999999998764322469999999997 344454 4799 9999999887 99
Q ss_pred hhcCC--cEEEEEcc
Q 032180 123 LEKDL--VWAILVVN 135 (146)
Q Consensus 123 ~~~~~--~~~~~~~~ 135 (146)
||||+ .||||||-
T Consensus 76 mL~d~G~~~ViiGHS 90 (244)
T 2v5b_A 76 SLKDYGISWVVLGHS 90 (244)
T ss_dssp HHHHTTCCEEEECCH
T ss_pred HHHHcCCCEEEeCch
Confidence 99999 99999995
No 25
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=99.79 E-value=9.8e-20 Score=147.46 Aligned_cols=88 Identities=13% Similarity=0.012 Sum_probs=71.2
Q ss_pred hhhcCCceeEeeecccCCH--HHHHHHHHHHhhcccCCCccEEEechHH-HHHHhc-CCee-eecccCccC---Cccccc
Q 032180 49 MASSNKFFVGGNWKCNGTK--ESITKLVSDLNDAKLEADVGEMMLLLSS-LDAYLV-IRFH-CEHYVWVYL---LVADVC 120 (146)
Q Consensus 49 m~~~rk~lViGNWKMNgt~--aei~eLl~~L~~~~~~~~VdVvVaPP~t-v~~~l~-~~I~-GAQNV~~~~---~g~~~~ 120 (146)
|..||+++|+||||||++. +++.+|++.+.......++++++|||++ +....+ -.+. ++|||++++ .|||||
T Consensus 1 ~~~mr~~~i~~NwKmn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~v~~~~~i~v~aQdv~~~~~Ga~TGeis 80 (225)
T 1hg3_A 1 MAKLKEPIIAINFKTYIEATGKRALEIAKAAEKVYKETGVTIVVAPQLVDLRMIAESVEIPVFAQHIDPIKPGSHTGHVL 80 (225)
T ss_dssp -CCCCSSEEEEECTBCGGGSHHHHHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHSCSSCBEESCCCSCCSBSCTTCCC
T ss_pred CCCCCCCEEEEECcccCCCCHHHHHHHHHHHHhhccccCCcEEEeCCHHHHHHHHHhcCCceeeeeCCcccCCCccCccc
Confidence 4457999999999999875 9999999988654223468999999997 433221 2577 999999986 699999
Q ss_pred hhhhcCC--cEEEEEccc
Q 032180 121 SILEKDL--VWAILVVNS 136 (146)
Q Consensus 121 ~~~~~~~--~~~~~~~~~ 136 (146)
+.|+||+ +||||+|--
T Consensus 81 ~~~l~~~Ga~~Vllghse 98 (225)
T 1hg3_A 81 PEAVKEAGAVGTLLNHSE 98 (225)
T ss_dssp HHHHHHTTCCEEEESCGG
T ss_pred HHHHHHcCCCEEEECcch
Confidence 9999999 999999965
No 26
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=99.75 E-value=5.1e-19 Score=143.41 Aligned_cols=85 Identities=16% Similarity=-0.014 Sum_probs=69.9
Q ss_pred cCCceeEeeecccCCH--HHHHHHHHHHhhcccCCCccEEEechHH-HHHHhc-CCee-eecccCccC---Cccccchhh
Q 032180 52 SNKFFVGGNWKCNGTK--ESITKLVSDLNDAKLEADVGEMMLLLSS-LDAYLV-IRFH-CEHYVWVYL---LVADVCSIL 123 (146)
Q Consensus 52 ~rk~lViGNWKMNgt~--aei~eLl~~L~~~~~~~~VdVvVaPP~t-v~~~l~-~~I~-GAQNV~~~~---~g~~~~~~~ 123 (146)
||+++|+||||||++. +++.+|++.+.......++++++|||++ +....+ -.+. ++|||++++ .|||||+.|
T Consensus 1 mr~~~i~~NwKmn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~L~~v~~~~~i~v~aQdv~~~~~Ga~TGeis~~~ 80 (226)
T 1w0m_A 1 MRLPILIINFKAYGEAAGKRAVELAKAAERAARELGVNIVVAPNHLELGLVSQSVDIPVYAQGADVEAGGAHTAHVSLEN 80 (226)
T ss_dssp CCSSEEEEECTBCGGGSTHHHHHHHHHHHHHHHHHTCEEEEECCGGGHHHHHTTCSSCBEESCCSBSSCSSCTTCCBHHH
T ss_pred CCCCEEEEECcccCCCCHHHHHHHHHHHHhcccccCCcEEEeCCHHHHHHHHHhcCCceEeeECChhhCCCccCCCCHHH
Confidence 5889999999999886 9999999988653222368999999997 444322 2577 999999986 699999999
Q ss_pred hcCC--cEEEEEccc
Q 032180 124 EKDL--VWAILVVNS 136 (146)
Q Consensus 124 ~~~~--~~~~~~~~~ 136 (146)
+||+ +||||+|--
T Consensus 81 l~~~Ga~~Vllghse 95 (226)
T 1w0m_A 81 IKEAGGSGVILNHSE 95 (226)
T ss_dssp HHHHTCCEEEECCTT
T ss_pred HHHcCCCEEEEeeee
Confidence 9999 999999965
No 27
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=99.51 E-value=5.4e-15 Score=117.68 Aligned_cols=80 Identities=8% Similarity=-0.056 Sum_probs=63.5
Q ss_pred eeEeeecccCCH--HHHHHHHHHHhhcccCCCccEEEechHH-HHHHhc-CCee-eecccCccC---CccccchhhhcCC
Q 032180 56 FVGGNWKCNGTK--ESITKLVSDLNDAKLEADVGEMMLLLSS-LDAYLV-IRFH-CEHYVWVYL---LVADVCSILEKDL 127 (146)
Q Consensus 56 lViGNWKMNgt~--aei~eLl~~L~~~~~~~~VdVvVaPP~t-v~~~l~-~~I~-GAQNV~~~~---~g~~~~~~~~~~~ 127 (146)
+|+||||||++. +++.+|++.+.......++++.+|||++ +....+ -.+. ++||+++++ .||||++.|++|+
T Consensus 2 ~i~~NwKm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~v~~~~~~~v~aqd~~~~~~ga~tGei~~~~~~~~ 81 (219)
T 2h6r_A 2 VIVINYKTYNESIGNRGLEIAKIAEKVSEESGITIGVAPQFVDLRMIVENVNIPVYAQHIDNINPGSHTGHILAEAIKDC 81 (219)
T ss_dssp CEEEECTTCGGGSTHHHHHHHHHHHHHHHHHTCCEEEECCTTTHHHHHHHCCSCBEESCCCSCCSBSCTTCCCHHHHHHH
T ss_pred EEEEECccCCCCCHHHHHHHHHHHHhcccccCCcEEEECCHHHHHHHHHHcCCcEEEEECChhhcCCccCchHHHHHHHc
Confidence 799999999886 9999999888653222368999999997 332211 1566 999999876 5899999999998
Q ss_pred --cEEEEEcc
Q 032180 128 --VWAILVVN 135 (146)
Q Consensus 128 --~~~~~~~~ 135 (146)
++|||+|-
T Consensus 82 Gad~Vll~~s 91 (219)
T 2h6r_A 82 GCKGTLINHS 91 (219)
T ss_dssp TCCEEEESBT
T ss_pred CCCEEEECCc
Confidence 99999885
Done!