RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= 032180
(146 letters)
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome,
gluconeogenesis, lipid synthesis, monomeric mutant,
glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Length = 244
Score = 64.4 bits (158), Expect = 2e-13
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 49 MASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADV 86
MAS + NWKCNG++ + L+ LN A + DV
Sbjct: 1 MASKPQPIAAANWKCNGSESLLVPLIETLNAATFDHDV 38
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the
ligand-free state, conformational heterogeneity,
TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1
PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1*
8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A*
1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Length = 248
Score = 63.3 bits (155), Expect = 3e-13
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 50 ASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADV 86
A S KFFVGGNWK NG K+++ +L++ LN AK+ AD
Sbjct: 1 APSRKFFVGGNWKMNGRKKNLGELITTLNAAKVPADT 37
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein
structure initiative, southeast collaboratory for
structural genomics; 1.70A {Caenorhabditis elegans}
SCOP: c.1.1.1
Length = 275
Score = 63.4 bits (155), Expect = 4e-13
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Query: 30 SHLRLFSSRRPRRGSSVVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADV 86
S+ + KFFVGGNWK NG S+ +V+ LN + + V
Sbjct: 2 SYYHHHHHHLESTSLYKAGLTR--KFFVGGNWKMNGDYASVDGIVTFLNASADNSSV 56
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition
state analogue, glycolysis, pentose shunt,
gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A
{Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A*
2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O*
1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Length = 251
Score = 62.9 bits (154), Expect = 5e-13
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 49 MASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADV 86
M++ + NWKCNGT SI KLV N+ + DV
Sbjct: 1 MSAKPQPIAAANWKCNGTTASIEKLVQVFNEHTISHDV 38
>3th6_A Triosephosphate isomerase; alpha/beta barrel, embryogenesis,
glycolysis; 2.40A {Rhipicephalus microplus}
Length = 249
Score = 60.6 bits (148), Expect = 4e-12
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 51 SSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADV 86
++ +F VGGNWK +G+K SI + + L A L+ +V
Sbjct: 2 AARRFCVGGNWKMHGSKNSIRDICNTLKGASLDPNV 37
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Length = 259
Score = 60.7 bits (148), Expect = 4e-12
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADV 86
KF VGGNWK NG K+ I +++ L L D
Sbjct: 4 KFVVGGNWKMNGDKKQINEIIGFLKSGPLNQDT 36
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia
intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Length = 257
Score = 59.4 bits (145), Expect = 9e-12
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 51 SSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADV 86
+ + F+GGN+KCNG+ + I V+ + K+ V
Sbjct: 2 PARRPFIGGNFKCNGSLDFIKSHVAAIAAHKIPDSV 37
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone
phosphate, michaelis complex; HET: FTR 13P; 1.20A
{Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A*
1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Length = 247
Score = 59.2 bits (144), Expect = 1e-11
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADV 86
FFVGGN+K NG+K+SI ++V LN A + +V
Sbjct: 3 TFFVGGNFKLNGSKQSIKEIVERLNTASIPENV 35
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome,
TIM-barrel, gluconeogenesis, lipid synthesis, atomic
resolution; 1.15A {Trypanosoma brucei brucei} PDB:
2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A
1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A*
1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Length = 250
Score = 59.1 bits (144), Expect = 1e-11
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADV 86
+ NWKCNG+++S+++L+ N + DV
Sbjct: 5 QPIAAANWKCNGSQQSLSELIDLFNSTSINHDV 37
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate,
META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A
{Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A
1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A
3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A
3pvf_A 3py2_A 2vfd_A 2vfe_A*
Length = 248
Score = 57.1 bits (139), Expect = 6e-11
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVGEMML 91
K+FV NWKCNGT ESI L + N+ + ++++
Sbjct: 4 KYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVV 41
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures,
university of washingto niaid, I structural genomics;
1.55A {Cryptosporidium parvum iowa II}
Length = 271
Score = 56.4 bits (137), Expect = 1e-10
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 31 HLRLFSSRRPRRGSSVVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAK 81
H + + +G +M+ K+FVGGN+KCNGTKES+ L+ +
Sbjct: 6 HHHMGTLEAQTQGPG--SMSR--KYFVGGNFKCNGTKESLKTLIDSFKQVE 52
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A
{Trichomonas vaginalis} PDB: 3qsr_A
Length = 255
Score = 54.1 bits (131), Expect = 9e-10
Identities = 19/34 (55%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 54 KFFVGGNWKCN-GTKESITKLVSDLNDAKLEADV 86
FFVGGNWK N T + KLV LN AK+E +V
Sbjct: 6 TFFVGGNWKANPKTVQEAEKLVEMLNGAKVEGNV 39
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer
stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Length = 261
Score = 52.5 bits (127), Expect = 4e-09
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 51 SSNKFFVGGNWKCNGTKESITKLVSDLND---AKLEADV 86
+ KF VGGNWKCNGT SI L + A+L V
Sbjct: 2 GAGKFVVGGNWKCNGTLASIETLTKGVAASVDAELAKKV 40
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A
{Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Length = 255
Score = 49.4 bits (119), Expect = 5e-08
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEAD 85
V GNWK NG++ + +LVS+L
Sbjct: 3 HPLVMGNWKLNGSRHMVHELVSNLRKELAGVA 34
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt,
gluconeogenesis, lipid synthesis, fatty acid
biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Length = 233
Score = 45.2 bits (108), Expect = 1e-06
Identities = 3/36 (8%), Positives = 8/36 (22%)
Query: 56 FVGGNWKCNGTKESITKLVSDLNDAKLEADVGEMML 91
N+K + +L + +
Sbjct: 3 IAMANFKSAMPIFKSHAYLKELEKTLKPQHFDRVFV 38
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A
{Thermotoga maritima} SCOP: c.1.1.1
Length = 255
Score = 44.8 bits (107), Expect = 2e-06
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVGEMML 91
K + GNWK + T K VS L + + E+++
Sbjct: 4 KLILAGNWKMHKTISEAKKFVSLLVNELHDVKEFEIVV 41
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis,
gluconeogenesis, pentose; HET: CIT; 1.90A
{Staphylococcus aureus}
Length = 254
Score = 42.1 bits (100), Expect = 2e-05
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADV 86
+ GNWK N T + V+ L +V
Sbjct: 4 TPIIAGNWKMNKTVQEAKDFVNALPTLPDSKEV 36
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A
{Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Length = 256
Score = 41.3 bits (98), Expect = 3e-05
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDA 80
V GNWK NG+KE + L++ LN
Sbjct: 3 HPVVMGNWKLNGSKEMVVDLLNGLNAE 29
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW,
gluconeogenesis, glycolysis, pentose shunt; 1.60A
{Bartonella henselae}
Length = 275
Score = 40.6 bits (96), Expect = 6e-05
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 31 HLRLFSSRRPRRGSSVVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAK 81
H + +M+ + + F+ GNWK NGT ES+ +L +
Sbjct: 4 HHHHHMGTLEAQTQGPGSMSPNIRPFIAGNWKMNGTGESLGELRAIAAGIS 54
>4g1k_A Triosephosphate isomerase; structural genomics, seattle
structural genomics center for infectious disease,
ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia
thailandensis}
Length = 272
Score = 39.5 bits (93), Expect = 1e-04
Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Query: 25 SQHVNSHLRLFSSRRPRRGSSVVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDA 80
+ H + H+ ++ GS M+ V GNWK +G L++++
Sbjct: 2 AHHHHHHMGTLEAQTQGPGS----MSKQRIKRVIGNWKMHGRLSGNQALLTEVAQG 53
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A
{Pyrococcus woesei} SCOP: c.1.1.1
Length = 225
Score = 38.8 bits (91), Expect = 2e-04
Identities = 6/40 (15%), Positives = 12/40 (30%), Gaps = 2/40 (5%)
Query: 49 MASSNKFFVGGNWKCNGTK--ESITKLVSDLNDAKLEADV 86
MA + + N+K + ++ E V
Sbjct: 1 MAKLKEPIIAINFKTYIEATGKRALEIAKAAEKVYKETGV 40
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 39.3 bits (91), Expect = 2e-04
Identities = 28/148 (18%), Positives = 50/148 (33%), Gaps = 40/148 (27%)
Query: 1 MASMVSTNCAQFSGLRRSSPTQSFSQHVNSHLRLFSSRRPRRGSSVVAMASSNKFFVGGN 60
+ M+S S L + + V ++ +S P +++ + K V
Sbjct: 335 PSPMLSI-----SNLTQ--------EQVQDYVNKTNSHLPAGKQVEISLVNGAKNLV--- 378
Query: 61 WKCNGTKESITKLVSDLNDAKLEADVG---------EMMLLLSSLDAYLVI--RFHCEHY 109
+G +S+ L L K +A G E L S+ +L + FH
Sbjct: 379 --VSGPPQSLYGLNLTL--RKAKAPSGLDQSRIPFSERKLKFSN--RFLPVASPFHSH-- 430
Query: 110 VWVYLLVADVCSILEKDLVWAILVVNSH 137
L ++ KDLV + N+
Sbjct: 431 ---LL--VPASDLINKDLVKNNVSFNAK 453
Score = 27.3 bits (60), Expect = 2.6
Identities = 17/134 (12%), Positives = 37/134 (27%), Gaps = 67/134 (50%)
Query: 44 SSVVAMASSNK-------------FFVGGNWKCNGT-----------KESITK------- 72
+ +A S + FF+G +C ++S+
Sbjct: 280 AVAIAETDSWESFFVSVRKAITVLFFIG--VRCYEAYPNTSLPPSILEDSLENNEGVPSP 337
Query: 73 --LVSDLNDAKLEADVGEMMLLLSSLDAYLVIRFHCEHYVWVYLLVADVCSILEKDLVWA 130
+S+L +++ V + +++L V
Sbjct: 338 MLSISNLTQEQVQDYVNK-------TNSHLPAGKQ------VE----------------- 367
Query: 131 ILVVNS--HFAISG 142
I +VN + +SG
Sbjct: 368 ISLVNGAKNLVVSG 381
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A
{Thermoproteus tenax} SCOP: c.1.1.1
Length = 226
Score = 38.4 bits (90), Expect = 3e-04
Identities = 7/35 (20%), Positives = 11/35 (31%), Gaps = 2/35 (5%)
Query: 54 KFFVGGNWKCNGTK--ESITKLVSDLNDAKLEADV 86
+ N+K G + +L A E V
Sbjct: 3 LPILIINFKAYGEAAGKRAVELAKAAERAARELGV 37
>3s6d_A Putative triosephosphate isomerase; seattle structural genomics
center for infectious disease, S pathogenic fungus,
eukaryote; 2.20A {Coccidioides immitis RS}
Length = 310
Score = 37.0 bits (86), Expect = 0.001
Identities = 12/127 (9%), Positives = 33/127 (25%), Gaps = 13/127 (10%)
Query: 25 SQHVNSHLRLFSSRRPRRGSSVVAMASSN-----KFFVGGNWKCNGTKESITKLVSDLND 79
+ H + H+ ++ GS A+A K + + K T + L +
Sbjct: 2 AHHHHHHMGTLEAQTQGPGSMASALAGPRFPPLPKTLLIISLKMYFTPSRTIDYIQGLLE 61
Query: 80 AKLEADVGEMMLLLSSLDAYLVIRFHCEHYVWVYLLVADVCSILEKDLVWAILVVNSHFA 139
+++ + L + ++ +Y +
Sbjct: 62 P-----RNDIIRQENRSRLLLAL---IPDFLTIYPCSEAIKEFESNLAAPQDADTPPPLL 113
Query: 140 ISGLNVS 146
+ +
Sbjct: 114 LGAQDCF 120
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 36.1 bits (82), Expect = 0.001
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 12/41 (29%)
Query: 67 KESITKLVSDLNDAKLEADVGEMMLLLSSLDAYLVIRFHCE 107
K+++ KL + L KL AD S A L I+ E
Sbjct: 19 KQALKKLQASL---KLYAD--------DSAPA-LAIKATME 47
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom
initiative, RSGI, structural genomics; 1.60A {Thermus
thermophilus}
Length = 250
Score = 36.3 bits (85), Expect = 0.002
Identities = 7/33 (21%), Positives = 11/33 (33%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADV 86
+ V GNWK + T ++L
Sbjct: 3 RVLVAGNWKMHKTPSEARVWFAELKRLLPPLQS 35
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic
triose-phosphate, glycolysis; 2.40A {Geobacillus
stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Length = 252
Score = 35.1 bits (82), Expect = 0.004
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVGEMML 91
K + GNWK NGT + V D+ AD ++
Sbjct: 2 KPIIAGNWKMNGTLAEAVQFVEDVKGHVPPADEVISVV 39
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium
tuberculosis} PDB: 3tao_A* 3gvg_A
Length = 267
Score = 33.6 bits (78), Expect = 0.013
Identities = 8/27 (29%), Positives = 11/27 (40%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDA 80
K + GNWK N LV + +
Sbjct: 4 KPLIAGNWKMNLNHYEAIALVQKIAFS 30
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A
{Methanocaldococcus jannaschii}
Length = 219
Score = 27.6 bits (62), Expect = 1.3
Identities = 3/32 (9%), Positives = 9/32 (28%), Gaps = 2/32 (6%)
Query: 57 VGGNWKCNGTK--ESITKLVSDLNDAKLEADV 86
+ N+K ++ E+ +
Sbjct: 3 IVINYKTYNESIGNRGLEIAKIAEKVSEESGI 34
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 26.7 bits (58), Expect = 3.3
Identities = 12/60 (20%), Positives = 21/60 (35%), Gaps = 12/60 (20%)
Query: 57 VGGNWKCNGTKESITKLVSDL---------NDAKLEADVGEMMLLLSSLDAYLVIRFHCE 107
W +G SI + L ND K E V ++ L ++ L+ + +
Sbjct: 510 DSTAWNASG---SILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTD 566
>1ryp_M 20S proteasome; multicatalytic proteinase, protein degradation,
antigen processing, hydrolase, protease; 1.90A
{Saccharomyces cerevisiae} SCOP: d.153.1.4 PDB: 1fnt_M*
1jd2_L* 1g65_L 1vsy_M 1z7q_M 2f16_L* 2fak_L* 2fny_L*
2gpl_L* 3d29_L* 3dy3_L* 3dy4_L* 3e47_L* 3gpj_L* 3gpt_L*
3gpw_L* 3hye_L* 3l5q_Q 3mg0_L* 3mg4_L* ...
Length = 222
Score = 25.8 bits (57), Expect = 5.1
Identities = 2/31 (6%), Positives = 11/31 (35%)
Query: 21 TQSFSQHVNSHLRLFSSRRPRRGSSVVAMAS 51
+ + + ++ + + S+ + A
Sbjct: 61 GDALVKRFKNSVKWYHFDHNDKKLSINSAAR 91
>3mgb_A TEG12; sulfotransferase, glycopeptide, antibiotic, transferase-anti
complex; HET: GHP 3MY 3FG OMY PAP; 2.04A {Uncultured
soil bacterium} PDB: 3mgc_A* 3mg9_A* 3nib_A*
Length = 319
Score = 25.1 bits (55), Expect = 9.2
Identities = 7/64 (10%), Positives = 16/64 (25%), Gaps = 9/64 (14%)
Query: 49 MASSNKFF---VGGNWKCNGTKESITKLVSDLNDAKLEADVGEMMLLLSSLDAYLVIRFH 105
+ + G + E +E+D E++ S +
Sbjct: 258 IRHGDARMMKGGPGGARPQFVGEGRYDQSLSFLGEDIESDYQELLHGDSGFA------LY 311
Query: 106 CEHY 109
+ Y
Sbjct: 312 AKQY 315
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity
phosphatase, carbohydrate BIND hydrolase; 2.40A
{Arabidopsis thaliana}
Length = 294
Score = 25.1 bits (54), Expect = 9.3
Identities = 4/11 (36%), Positives = 6/11 (54%)
Query: 54 KFFVGGNWKCN 64
K+ + G W N
Sbjct: 222 KYIIDGEWTHN 232
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.322 0.131 0.393
Gapped
Lambda K H
0.267 0.0792 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,052,270
Number of extensions: 104545
Number of successful extensions: 214
Number of sequences better than 10.0: 1
Number of HSP's gapped: 212
Number of HSP's successfully gapped: 36
Length of query: 146
Length of database: 6,701,793
Length adjustment: 85
Effective length of query: 61
Effective length of database: 4,328,508
Effective search space: 264038988
Effective search space used: 264038988
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (24.1 bits)