BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032182
(146 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P51414|RL261_ARATH 60S ribosomal protein L26-1 OS=Arabidopsis thaliana GN=RPL26A PE=2
SV=2
Length = 146
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 132/146 (90%), Positives = 142/146 (97%)
Query: 1 MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRG 60
MKYNPRV+SSRRKNRKAHFTA SS RR++MS+PLSTDLRQKYNVRSMP+RKDDEVQ+VRG
Sbjct: 1 MKYNPRVTSSRRKNRKAHFTASSSERRVIMSSPLSTDLRQKYNVRSMPIRKDDEVQIVRG 60
Query: 61 TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120
TYKGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI PSKVVITKLRLDKDRKSLL+R
Sbjct: 61 TYKGREGKVVQVYRRKWVIHIERITREKVNGTTVNVGIQPSKVVITKLRLDKDRKSLLER 120
Query: 121 KAKGRAAADKEKGTKFTPEDIMQSVD 146
KAKGRAAADKEKGTKFT ED+MQ+VD
Sbjct: 121 KAKGRAAADKEKGTKFTSEDVMQNVD 146
>sp|Q9FJX2|RL262_ARATH 60S ribosomal protein L26-2 OS=Arabidopsis thaliana GN=RPL26B PE=2
SV=1
Length = 146
Score = 265 bits (676), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 126/146 (86%), Positives = 140/146 (95%)
Query: 1 MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRG 60
MK+NPRVSSSRRKNRKAHFTAPSSVRR+LMS+PLS DLR K+NVRSMP+RKDDEVQVVRG
Sbjct: 1 MKFNPRVSSSRRKNRKAHFTAPSSVRRVLMSSPLSKDLRNKHNVRSMPIRKDDEVQVVRG 60
Query: 61 TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120
T+KGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+N S V+ITKLRLDKDRKSLL+R
Sbjct: 61 TFKGREGKVMQVYRRKWVIHIERITREKVNGSTVNVGVNASNVMITKLRLDKDRKSLLER 120
Query: 121 KAKGRAAADKEKGTKFTPEDIMQSVD 146
KA GRAAADKEKGTKF+ ED+M++VD
Sbjct: 121 KANGRAAADKEKGTKFSAEDVMENVD 146
>sp|Q39411|RL26_BRARA 60S ribosomal protein L26 OS=Brassica rapa GN=RPL26 PE=2 SV=1
Length = 146
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 120/145 (82%), Positives = 135/145 (93%)
Query: 1 MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRG 60
MKYNPRV+SSRR+NRK HFTA SS RR+ MS+PLSTDLRQKYNVRSMP+RKDDE Q+VRG
Sbjct: 1 MKYNPRVTSSRRRNRKPHFTASSSERRVXMSSPLSTDLRQKYNVRSMPIRKDDEXQIVRG 60
Query: 61 TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120
TYKGREGK+ QVYRRK VIHIER+TREKVNG+TVNVG+ P+KVVITKLRLDKDRKSLL+R
Sbjct: 61 TYKGREGKLXQVYRRKXVIHIERLTREKVNGTTVNVGVQPTKVVITKLRLDKDRKSLLER 120
Query: 121 KAKGRAAADKEKGTKFTPEDIMQSV 145
KAKGRAAADK+KGTKFT D+MQ+V
Sbjct: 121 KAKGRAAADKDKGTKFTAVDVMQNV 145
>sp|P61255|RL26_MOUSE 60S ribosomal protein L26 OS=Mus musculus GN=Rpl26 PE=2 SV=1
Length = 145
Score = 195 bits (495), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 99/142 (69%), Positives = 120/142 (84%), Gaps = 3/142 (2%)
Query: 1 MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRG 60
MK+NP V+S R KNRK HF APS +RR +MS+PLS +LRQKYNVRSMP+RKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 61 TYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLD 119
YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+PSKVVIT+L+LDKDRK +L+
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 120 RKAKGRAAADKEKGTKFTPEDI 141
RKAK R KEKG K+ E I
Sbjct: 121 RKAKSRQVG-KEKG-KYKEETI 140
>sp|P61256|RL26_MACFA 60S ribosomal protein L26 OS=Macaca fascicularis GN=RPL26 PE=2 SV=1
Length = 145
Score = 195 bits (495), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 99/142 (69%), Positives = 120/142 (84%), Gaps = 3/142 (2%)
Query: 1 MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRG 60
MK+NP V+S R KNRK HF APS +RR +MS+PLS +LRQKYNVRSMP+RKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 61 TYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLD 119
YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+PSKVVIT+L+LDKDRK +L+
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 120 RKAKGRAAADKEKGTKFTPEDI 141
RKAK R KEKG K+ E I
Sbjct: 121 RKAKSRQVG-KEKG-KYKEETI 140
>sp|P61254|RL26_HUMAN 60S ribosomal protein L26 OS=Homo sapiens GN=RPL26 PE=1 SV=1
Length = 145
Score = 195 bits (495), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 99/142 (69%), Positives = 120/142 (84%), Gaps = 3/142 (2%)
Query: 1 MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRG 60
MK+NP V+S R KNRK HF APS +RR +MS+PLS +LRQKYNVRSMP+RKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 61 TYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLD 119
YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+PSKVVIT+L+LDKDRK +L+
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 120 RKAKGRAAADKEKGTKFTPEDI 141
RKAK R KEKG K+ E I
Sbjct: 121 RKAKSRQVG-KEKG-KYKEETI 140
>sp|P61257|RL26_BOVIN 60S ribosomal protein L26 OS=Bos taurus GN=RPL26 PE=2 SV=1
Length = 145
Score = 195 bits (495), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 99/142 (69%), Positives = 120/142 (84%), Gaps = 3/142 (2%)
Query: 1 MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRG 60
MK+NP V+S R KNRK HF APS +RR +MS+PLS +LRQKYNVRSMP+RKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 61 TYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLD 119
YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+PSKVVIT+L+LDKDRK +L+
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 120 RKAKGRAAADKEKGTKFTPEDI 141
RKAK R KEKG K+ E I
Sbjct: 121 RKAKSRQVG-KEKG-KYKEETI 140
>sp|Q9UNX3|RL26L_HUMAN 60S ribosomal protein L26-like 1 OS=Homo sapiens GN=RPL26L1 PE=1
SV=1
Length = 145
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/142 (70%), Positives = 120/142 (84%), Gaps = 3/142 (2%)
Query: 1 MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRG 60
MK+NP V+S R KNRK HF APS VRR +MS+PLS +LRQKYNVRSMP+RKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 61 TYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLD 119
YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+PSKVVIT+L+LDKDRK +L+
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 120 RKAKGRAAADKEKGTKFTPEDI 141
RKAK R KEKG K+ E I
Sbjct: 121 RKAKSRQVG-KEKG-KYKEELI 140
>sp|P12749|RL26_RAT 60S ribosomal protein L26 OS=Rattus norvegicus GN=Rpl26 PE=1 SV=1
Length = 145
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/142 (69%), Positives = 119/142 (83%), Gaps = 3/142 (2%)
Query: 1 MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRG 60
MK+NP V+S R KNRK HF APS +RR +MS+PLS +LRQKYNVRSMP+RKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 61 TYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLD 119
YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI PSKVVIT+L+LDKDRK +L+
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIRPSKVVITRLKLDKDRKKILE 120
Query: 120 RKAKGRAAADKEKGTKFTPEDI 141
RKAK R KEKG K+ E I
Sbjct: 121 RKAKSRQVG-KEKG-KYKEETI 140
>sp|Q95WA0|RL26_LITLI 60S ribosomal protein L26 OS=Littorina littorea GN=RPL26 PE=2 SV=1
Length = 144
Score = 191 bits (486), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 97/145 (66%), Positives = 118/145 (81%), Gaps = 2/145 (1%)
Query: 1 MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRG 60
MK+N VSS R KNRK HF APS +RR +MS+P+S +LRQKYN RSMP+RKDDEVQVVRG
Sbjct: 1 MKFNKMVSSDRGKNRKRHFNAPSHMRRKIMSSPMSKELRQKYNCRSMPIRKDDEVQVVRG 60
Query: 61 TYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLD 119
+KG++ GKVVQVYR+K+V+HIERI REK NG+TV VGI+PSKV+I KL++DKDRK +LD
Sbjct: 61 HFKGQQVGKVVQVYRKKFVVHIERIQREKANGATVYVGIHPSKVLIVKLKMDKDRKRILD 120
Query: 120 RKAKGRAAADKEKGTKFTPEDIMQS 144
KAK RA A EKG K+T E + S
Sbjct: 121 NKAKSRAKALAEKG-KYTEETMETS 144
>sp|Q2I0I6|RL26_AILME 60S ribosomal protein L26 OS=Ailuropoda melanoleuca GN=RPL26 PE=2
SV=1
Length = 145
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 94/134 (70%), Positives = 113/134 (84%), Gaps = 2/134 (1%)
Query: 1 MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRG 60
MK P V+S R KNRK HF APS +RR +S+PLS +LRQKYNVRSMP+RKDDEVQVVRG
Sbjct: 1 MKSYPFVTSDRSKNRKRHFNAPSHIRRKTLSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 61 TYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLD 119
YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+PSKVVIT+L+LDKDRK +L+
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 120 RKAKGRAAADKEKG 133
RKAK R KEKG
Sbjct: 121 RKAKSRQVG-KEKG 133
>sp|P47832|RL26_CHICK 60S ribosomal protein L26 (Fragment) OS=Gallus gallus GN=RPL26 PE=2
SV=1
Length = 128
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/125 (70%), Positives = 107/125 (85%), Gaps = 3/125 (2%)
Query: 18 HFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGRE-GKVVQVYRRK 76
HF APS +RR +MS+PLS +LRQKYNVRSMP+RKDDEVQVVRG YKG++ GKVVQVYR+K
Sbjct: 1 HFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKK 60
Query: 77 WVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDRKAKGRAAADKEKGTKF 136
+VI+IER+ REK NG+TV+VGI+PSKVVIT+L+LDKDRK +L+RKAK R KEKG K+
Sbjct: 61 YVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVG-KEKG-KY 118
Query: 137 TPEDI 141
E I
Sbjct: 119 KEETI 123
>sp|P78946|RL26_SCHPO 60S ribosomal protein L26 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl26 PE=3 SV=1
Length = 126
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 79/122 (64%), Positives = 103/122 (84%)
Query: 1 MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRG 60
MK++ V+SSRRK RKAHF APSSVRR+LMSAPLS +LR++Y +RS+PVR+DD++ V+RG
Sbjct: 1 MKFSRDVTSSRRKQRKAHFGAPSSVRRVLMSAPLSKELREQYKIRSLPVRRDDQITVIRG 60
Query: 61 TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120
+ KGREGK+ VYR+K+++ IER+TREK NG++ VGI+ SKVVITKL LDKDRK L+ R
Sbjct: 61 SNKGREGKITSVYRKKFLLLIERVTREKANGASAPVGIDASKVVITKLHLDKDRKDLIVR 120
Query: 121 KA 122
K
Sbjct: 121 KG 122
>sp|Q23F79|RL26_TETTS 60S ribosomal protein L26 OS=Tetrahymena thermophila (strain SB210)
GN=RPL26 PE=1 SV=2
Length = 135
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/137 (59%), Positives = 106/137 (77%), Gaps = 4/137 (2%)
Query: 1 MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRG 60
MK + VSS+RRK RKAHF +PS +R+ LMSA LS DLR KYNVRSMPVRKDDEV +VRG
Sbjct: 1 MKTHVEVSSARRKQRKAHFASPSHLRQTLMSAHLSKDLRSKYNVRSMPVRKDDEVLIVRG 60
Query: 61 TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120
+KG +GKV QVYR+KW IH+E+I++ K+NG+ + ++ S++V+TKL+LDK R+SLL R
Sbjct: 61 KFKGNKGKVTQVYRKKWAIHVEKISKNKLNGAPYQIPLSASQLVLTKLKLDKSRQSLLTR 120
Query: 121 KAKGRAAADKEKGTKFT 137
K AA+ K KG K T
Sbjct: 121 K----AASLKTKGQKHT 133
>sp|Q54QM8|RL26_DICDI 60S ribosomal protein L26 OS=Dictyostelium discoideum GN=rpl26 PE=3
SV=1
Length = 139
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 85/132 (64%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
Query: 1 MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRG 60
MK N VSSSRRK+RKAHFTA S RRI MSA LS DLR KYNVRS+P+RKDDEV+VV G
Sbjct: 1 MKRNTNVSSSRRKSRKAHFTASSGERRIRMSAALSHDLRTKYNVRSLPIRKDDEVRVVCG 60
Query: 61 TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120
K EGKVV YR+K+VIHI+++T K NG+T +G++PS V++TKL+LDKDRK+LL+R
Sbjct: 61 DNKNHEGKVVACYRKKYVIHIDKLTVTKTNGNTAQIGVSPSNVILTKLKLDKDRKALLER 120
Query: 121 KAKGRAAADKEK 132
K + AADK K
Sbjct: 121 KNRT-VAADKGK 131
>sp|Q19869|RL26_CAEEL 60S ribosomal protein L26 OS=Caenorhabditis elegans GN=rpl-26 PE=3
SV=1
Length = 142
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 78/126 (61%), Positives = 105/126 (83%)
Query: 1 MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRG 60
MK NP VSS K+RKAHF APS RR +MSAPL+ +LR K+ +R++P+R DDEV V+RG
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60
Query: 61 TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120
+KG G+V++ YR+K+VIHI++ITREK NGSTV++GI+PSKV ITKL+LDKDR++L++R
Sbjct: 61 RHKGNTGRVLRCYRKKFVIHIDKITREKANGSTVHIGIHPSKVAITKLKLDKDRRALVER 120
Query: 121 KAKGRA 126
KA GR+
Sbjct: 121 KAAGRS 126
>sp|P05743|RL26A_YEAST 60S ribosomal protein L26-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL26A PE=1 SV=3
Length = 127
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 69/116 (59%), Positives = 98/116 (84%)
Query: 7 VSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGRE 66
VSS RRK RKA+FTAPSS RR+L+SAPLS +LR +Y ++++P+R+DDEV VVRG+ KG+E
Sbjct: 8 VSSDRRKARKAYFTAPSSQRRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGSKKGQE 67
Query: 67 GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDRKA 122
GK+ VYR K+ + ++++T+EKVNG++V + ++PSK+VITKL LDKDRK+L+ RK
Sbjct: 68 GKISSVYRLKFAVQVDKVTKEKVNGASVPINLHPSKLVITKLHLDKDRKALIQRKG 123
>sp|P53221|RL26B_YEAST 60S ribosomal protein L26-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL26B PE=1 SV=2
Length = 127
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 69/116 (59%), Positives = 98/116 (84%)
Query: 7 VSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGRE 66
VSS RRK RKA+FTAPSS RR+L+SAPLS +LR +Y ++++P+R+DDEV VVRG+ KG+E
Sbjct: 8 VSSDRRKARKAYFTAPSSERRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGSKKGQE 67
Query: 67 GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDRKA 122
GK+ VYR K+ + ++++T+EKVNG++V + ++PSK+VITKL LDKDRK+L+ RK
Sbjct: 68 GKISSVYRLKFAVQVDKVTKEKVNGASVPINLHPSKLVITKLHLDKDRKALIQRKG 123
>sp|O59429|RL24_PYRHO 50S ribosomal protein L24P OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rpl24p PE=3 SV=2
Length = 121
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 87/123 (70%), Gaps = 4/123 (3%)
Query: 1 MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRG 60
MK N S RK RK + AP VR+ +MSAPLS +LR+KY VR++PVR D+V+++RG
Sbjct: 1 MKMN---SKQPRKQRKFLYNAPLHVRQKMMSAPLSKELREKYKVRNLPVRVGDKVRIMRG 57
Query: 61 TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKD-RKSLLD 119
+KG EGKVV+V +++ I++E +T KVNG+ V I+PS V+I +L LD + RK +++
Sbjct: 58 DFKGYEGKVVEVDLKRYRIYVEGVTLRKVNGTEVFYPIHPSNVMIIELNLDDEKRKKIIE 117
Query: 120 RKA 122
R+A
Sbjct: 118 RRA 120
>sp|Q8U010|RL24_PYRFU 50S ribosomal protein L24P OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rpl24p PE=1 SV=2
Length = 121
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 82/116 (70%), Gaps = 1/116 (0%)
Query: 8 SSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREG 67
S RK RK + AP VR+ LMSAPLS +LR+KY VR++PVR D+V+++RG YKG EG
Sbjct: 5 SKQPRKQRKFLYNAPLHVRQKLMSAPLSRELREKYKVRNLPVRVGDKVRIMRGDYKGHEG 64
Query: 68 KVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRL-DKDRKSLLDRKA 122
KVV+V +++ I++E T K NG+ V I+PS V+I +L L D+ RK +++R+A
Sbjct: 65 KVVEVDLKRYRIYVEGATLRKTNGTEVFYPIHPSNVMIIELNLEDEKRKKIIERRA 120
>sp|B1L777|RL24_KORCO 50S ribosomal protein L24P OS=Korarchaeum cryptofilum (strain OPF8)
GN=rpl24p PE=3 SV=1
Length = 131
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 78/111 (70%), Gaps = 1/111 (0%)
Query: 13 KNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQV 72
K RK + AP R +MSAPLS +L+ KY + S+P+RK D V+V+RG Y+G EG+V+ V
Sbjct: 10 KQRKYLYNAPIHHRGKIMSAPLSEELKSKYGINSIPIRKGDRVKVMRGDYRGTEGEVISV 69
Query: 73 YRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRL-DKDRKSLLDRKA 122
R+++ I ++ I R K +G+ V V I+PSKVVITKL L D+ RK LL+RK
Sbjct: 70 DRKRYRIAVKGIVRRKADGTEVPVPIHPSKVVITKLYLKDEARKRLLERKG 120
>sp|Q5JJF9|RL24_PYRKO 50S ribosomal protein L24P OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rpl24p PE=3 SV=1
Length = 121
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Query: 12 RKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQ 71
RK RK + AP +R +MSAPLS +LR+KY VR++P+R D+V+V+RG +KG EGKVV+
Sbjct: 9 RKQRKFLYNAPLHLRGKIMSAPLSKELREKYGVRNLPIRVGDKVKVMRGDFKGVEGKVVE 68
Query: 72 VYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRL-DKDRKSLLDRKA 122
V R++ IH+E +T +K +G+ V ++PS V+I +L L D+ R+ +++R+A
Sbjct: 69 VDLRRYRIHVEGVTHKKTDGTEVFYPLHPSNVMIVELNLEDEKREKIIERRA 120
>sp|Q9V1U7|RL24_PYRAB 50S ribosomal protein L24P OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rpl24p PE=3 SV=1
Length = 121
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 82/116 (70%), Gaps = 1/116 (0%)
Query: 8 SSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREG 67
S RK RK + AP +R+ +M+APLS +LR+KY +R++PVR D+V+++RG +KG EG
Sbjct: 5 SKQPRKQRKFLYNAPLHLRQKMMAAPLSKELREKYKIRNLPVRVGDKVRIMRGDFKGHEG 64
Query: 68 KVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKD-RKSLLDRKA 122
KVV+V +++ I++E T K NG+ V I+PS V+I +L LD + RK +++R+A
Sbjct: 65 KVVEVDLKRYRIYVEGATLRKTNGTEVFYPIHPSNVMIIELNLDDERRKKIIERRA 120
>sp|A3DNB8|RL24_STAMF 50S ribosomal protein L24P OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=rpl24p PE=3 SV=1
Length = 152
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 93/142 (65%), Gaps = 4/142 (2%)
Query: 8 SSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREG 67
SS K RKA F P +R L +APLS +LR+KY V+ +PVRK D V+++RG +KG EG
Sbjct: 6 SSKPSKQRKALFNMPLHLRHKLFNAPLSKELREKYGVKKLPVRKGDVVRIMRGDWKGHEG 65
Query: 68 KVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRL-DKDRKSLLDRKAKGRA 126
KVV++ R+ +++E + R+K + + V I+PSKV+I KL L DK R+ +++R+ KG
Sbjct: 66 KVVRIDLRRVRLYVEGVQRKKADQTPVYYPIHPSKVMIIKLDLSDKWRRKIIERR-KGLI 124
Query: 127 AAD--KEKGTKFTPEDIMQSVD 146
++ +EK T T E ++++
Sbjct: 125 ESEVVEEKETSKTSEGGGKTIE 146
>sp|Q9YF83|RL24_AERPE 50S ribosomal protein L24P OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rpl24p
PE=3 SV=1
Length = 132
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 83/118 (70%), Gaps = 3/118 (2%)
Query: 5 PRVSSSR--RKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTY 62
P ++ SR RK R+A + AP R+ L+SA LS +LR+KY VRS+PVRK D+V+V+RG +
Sbjct: 2 PVLTRSRQPRKQRRALYRAPLHARQKLVSATLSPELREKYGVRSLPVRKGDKVRVMRGDF 61
Query: 63 KGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRL-DKDRKSLLD 119
KG EGKVV+V R+ I+I+ +T K +G+ V I+PS V+I +L L D+ RK +++
Sbjct: 62 KGHEGKVVKVDLRRLRIYIDGVTVTKADGTPVFRPIHPSNVMIVELDLSDEYRKKMIE 119
>sp|Q8TW19|RL24_METKA 50S ribosomal protein L24P OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rpl24p PE=3 SV=1
Length = 149
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
Query: 8 SSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREG 67
SS RK RKA F AP R+ LMSA L +LR+K+N RS+PVR+ D V+++RG +KG EG
Sbjct: 6 SSQPRKQRKAFFNAPLHKRQKLMSATLHPELRKKFNRRSLPVRRGDMVRIMRGDFKGHEG 65
Query: 68 KVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKD-RKSLLDRKA 122
+VV+V ++ I++E T E+ NG V I+PS V+I + LD R+ +++R
Sbjct: 66 EVVEVDLKRLRIYVEGATIERANGEKVYYPIHPSNVMIIEPNLDDPMRRKIIERSG 121
>sp|A2BMD0|RL24_HYPBU 50S ribosomal protein L24P OS=Hyperthermus butylicus (strain DSM
5456 / JCM 9403) GN=rpl24p PE=3 SV=1
Length = 149
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 76/119 (63%), Gaps = 1/119 (0%)
Query: 8 SSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREG 67
SS RK R+A F AP R+ LM+APLS +LR++Y +RS+PVR DEV ++RG +KG G
Sbjct: 6 SSQPRKQRRALFNAPLHKRQKLMAAPLSPELRKQYGIRSLPVRVGDEVVIMRGDFKGHRG 65
Query: 68 KVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKD-RKSLLDRKAKGR 125
KVV+V R+ I +E +T G I+PS V+I L LD + R+ +++RK + R
Sbjct: 66 KVVRVDLRRMRIFVEGVTITNARGEPRYYPIHPSNVMIVSLNLDDERRRQIIERKRRQR 124
>sp|O26122|RL24_METTH 50S ribosomal protein L24P OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rpl24p PE=3 SV=1
Length = 117
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 80/117 (68%), Gaps = 1/117 (0%)
Query: 7 VSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGRE 66
+S RK RK + AP RR +MSA LS +LR++Y RS+P+RK D+V+++RG ++G E
Sbjct: 1 MSKQPRKQRKYIYEAPLHARRKMMSANLSRELREEYGRRSLPLRKGDKVEILRGDFRGHE 60
Query: 67 GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRK-SLLDRKA 122
GKV +V +++ +++E T +KV+G+TV ++PS + I L LD +++ +L+RK
Sbjct: 61 GKVEKVDLKRYRVYVEGATIQKVDGTTVYFPLHPSNLRIVDLNLDDEKRIKILERKG 117
>sp|A8ACD3|RL24_IGNH4 50S ribosomal protein L24P OS=Ignicoccus hospitalis (strain KIN4/I
/ DSM 18386 / JCM 14125) GN=rpl24p PE=3 SV=1
Length = 125
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 73/112 (65%), Gaps = 1/112 (0%)
Query: 13 KNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQV 72
K RK + AP +R M+APLS +LR+KY V+ +PVRK D V++VRG ++G EG V +V
Sbjct: 11 KQRKFLYNAPLHLRHKFMNAPLSKELREKYGVKRLPVRKGDTVKIVRGKFRGHEGTVAKV 70
Query: 73 YRRKWVIHIERITREKVNGSTVNVGINPSKVVITKL-RLDKDRKSLLDRKAK 123
+K I+++ T E G I+PSKV+ITKL +DK R+ +++R+ K
Sbjct: 71 DLKKARIYVDGATIENSRGEQRFYPIHPSKVIITKLGEVDKVRQKIIERRKK 122
>sp|O05633|RL24_SULAC 50S ribosomal protein L24P OS=Sulfolobus acidocaldarius (strain
ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB
11770) GN=rpl24p PE=3 SV=2
Length = 134
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 89/136 (65%), Gaps = 5/136 (3%)
Query: 7 VSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGRE 66
+SS K RK + P+ +R L++A LS DL ++Y ++ + +RK D V+++RG+ G E
Sbjct: 2 ISSKPSKQRKLVYNLPNHLRYKLLTARLSEDLEKQYGIKRISIRKGDSVKLMRGSQVGYE 61
Query: 67 GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRL-DKDRKSLLDRKAKGR 125
GKVV+V R++ + IE +T++K +G+ V V ++ SKV+ITKL DK+R ++RK K R
Sbjct: 62 GKVVEVDRKRGRVAIEGLTKKKADGTPVYVWVHASKVIITKLDTGDKERMDAIERKRKMR 121
Query: 126 AAADKEKGTKFTPEDI 141
+E +K +P+++
Sbjct: 122 ----EEYFSKKSPKEV 133
>sp|Q2NFW8|RL24_METST 50S ribosomal protein L24P OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rpl24p PE=3 SV=1
Length = 117
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
Query: 7 VSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGRE 66
+S RK RKA +TAP R MS LS DL++++N RS PVRK D V++VRG ++G E
Sbjct: 1 MSKQPRKQRKALYTAPLHKRHNSMSVHLSDDLKEEFNRRSFPVRKGDSVEIVRGDFRGTE 60
Query: 67 GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKS-LLDRK 121
GKV V + + + ++ + +K +GS + I+PS +V+T++ LD +R++ L+RK
Sbjct: 61 GKVEGVDLKNYRVLVDGASSQKQDGSKLYQPIHPSNLVLTEIYLDDERRNQALNRK 116
>sp|A1RWS4|RL24_THEPD 50S ribosomal protein L24P OS=Thermofilum pendens (strain Hrk 5)
GN=rpl24p PE=3 SV=1
Length = 131
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Query: 19 FTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWV 78
+ AP +R + APLS +L+QK ++ + VRK D V +VRG++KG EGKV V +K
Sbjct: 18 YDAPLHIRSKKIVAPLSAELQQKLGIKRIRVRKGDRVLIVRGSFKGHEGKVTSVDVKKGR 77
Query: 79 IHIERITREKVNGSTVNVGINPSKVVITKLRL-DKDRKSLLDRK 121
IH+E T K +G+ V I+PSKVV+T+L L D RK L++RK
Sbjct: 78 IHVEGATLRKADGTEVPFPIHPSKVVVTELDLSDPRRKELVERK 121
>sp|A3MWZ8|RL24_PYRCJ 50S ribosomal protein L24P OS=Pyrobaculum calidifontis (strain JCM
11548 / VA1) GN=rpl24p PE=3 SV=1
Length = 128
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 8 SSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREG 67
S+ RK R + + AP +RR L++A LS +L++K V+ +PVR+ D V ++RG +KG G
Sbjct: 6 SAQPRKQRLSLYAAPLHLRRKLLNAKLSPELQKKLGVKRLPVRRGDTVLIMRGDFKGVTG 65
Query: 68 KVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRL-DKDRKSLLDRKAKGRA 126
KVV+V ++ I +E TR G TV I+PSKV+I + L DK R+ L++R+ +G+
Sbjct: 66 KVVKVDLKRVRIFVEGATRTNSRGQTVYYPIHPSKVMIVDVDLSDKARQKLIERRKRGQH 125
Query: 127 AA 128
+
Sbjct: 126 GS 127
>sp|P54038|RL24_METJA 50S ribosomal protein L24P OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rpl24p PE=3 SV=1
Length = 120
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Query: 8 SSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREG 67
S RK RKA F AP +RR +MSA LS +L++K ++PVRK D V+++RG +KG EG
Sbjct: 6 SKQPRKQRKALFNAPLHLRRKVMSAMLSKELKEKLGKNAIPVRKGDVVRIMRGDFKGLEG 65
Query: 68 KVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSL 117
+V++V +++ I++E ++ +G V I+PS V+I KL DKD K
Sbjct: 66 EVIKVDLKRYRIYVEGANNKRQDGREVPYPIHPSNVMIIKL-YDKDEKRF 114
>sp|A6UWU9|RL24_META3 50S ribosomal protein L24P OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=rpl24p PE=3 SV=1
Length = 119
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 67/108 (62%)
Query: 8 SSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREG 67
S RK RKA + AP R LMSA LS DL++KYN ++PV+ D V+++RGT+KG EG
Sbjct: 6 SKQPRKQRKALYNAPLHARNKLMSAMLSKDLKEKYNKNALPVKTGDTVKILRGTFKGIEG 65
Query: 68 KVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRK 115
+V +V + + I++E K +G+ I+PS V+I K+ DR+
Sbjct: 66 EVSKVDYKSYKIYVEGAVNRKQDGNESLYPIHPSNVMIVKMDDSDDRR 113
>sp|A4WLL3|RL24_PYRAR 50S ribosomal protein L24P OS=Pyrobaculum arsenaticum (strain DSM
13514 / JCM 11321) GN=rpl24p PE=3 SV=1
Length = 122
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 73/117 (62%), Gaps = 1/117 (0%)
Query: 8 SSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREG 67
S+ RK R A F AP +R L +A LS +L +K V+ +PVR+ D V ++RG +KG G
Sbjct: 6 SAQPRKQRLALFNAPLHLRHKLFNAKLSPELEKKLGVKRLPVRRGDTVMILRGDFKGVTG 65
Query: 68 KVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRL-DKDRKSLLDRKAK 123
KVV+V +K I++E TR G TV I+PSKV+I + + DK R+ +++R+ K
Sbjct: 66 KVVRVDLKKVRIYVEGATRTNSRGQTVYYPIHPSKVMIVDVDMSDKARQKIIERRKK 122
>sp|A5UL77|RL24_METS3 50S ribosomal protein L24P OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=rpl24p PE=3 SV=1
Length = 117
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 60/97 (61%)
Query: 7 VSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGRE 66
+S RK RKA + AP+ R MSA LS DLR RS+P+RK D+VQV+RG +KG E
Sbjct: 1 MSKQPRKQRKALYNAPAHARGKHMSATLSKDLRADIGKRSLPIRKGDKVQVLRGDFKGHE 60
Query: 67 GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKV 103
G V+ V + I IE +T K +G+ V + ++PS V
Sbjct: 61 GAVLGVDYGSYKITIEEVTLSKPDGTAVFLPVDPSNV 97
>sp|A0B9V9|RL24_METTP 50S ribosomal protein L24P OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=rpl24p PE=3 SV=1
Length = 116
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 68/109 (62%)
Query: 7 VSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGRE 66
VS RK RKA F AP +R+ M A LS +LR++Y RS V+K D V+V+RG G E
Sbjct: 2 VSKQPRKQRKARFNAPLHMRQRFMHAMLSPELRKEYKKRSAQVKKGDTVKVMRGDNAGVE 61
Query: 67 GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRK 115
G+V+ V ++ VI + ++ + +G+ V I+PS V+ITKL LD D +
Sbjct: 62 GEVLSVDLKRCVITVAGVSNFRADGTEVPRPIHPSNVMITKLDLDDDER 110
>sp|A8MB21|RL24_CALMQ 50S ribosomal protein L24P OS=Caldivirga maquilingensis (strain
ATCC 700844 / DSMZ 13496 / JCM 10307 / IC-167) GN=rpl24p
PE=3 SV=1
Length = 143
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 75/121 (61%), Gaps = 1/121 (0%)
Query: 8 SSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREG 67
SS RK KA AP RR L++APLS DL+++ +R +PVR D V ++RG +KG G
Sbjct: 7 SSQPRKQHKALTKAPWHARRRLLTAPLSKDLQRQLGIRRIPVRVGDTVLILRGDFKGTRG 66
Query: 68 KVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKL-RLDKDRKSLLDRKAKGRA 126
KV +V ++ I+++ + +K +G V I+PSKVVI +L + DK R + +D+ K R
Sbjct: 67 KVTRVDYKRVRIYVDSASFKKPSGEAVYYPIHPSKVVIVELDQSDKARVAAIDKTRKARE 126
Query: 127 A 127
A
Sbjct: 127 A 127
>sp|A6VGZ6|RL24_METM7 50S ribosomal protein L24P OS=Methanococcus maripaludis (strain C7
/ ATCC BAA-1331) GN=rpl24p PE=3 SV=1
Length = 119
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%)
Query: 8 SSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREG 67
S RK RKA + AP +R +M+A LS +L++K+N S+PV+K D V+V+RG +KG EG
Sbjct: 6 SKQPRKQRKALYNAPLHLRNSVMAAMLSKELKEKFNKNSLPVKKGDTVKVLRGNFKGIEG 65
Query: 68 KVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKL 108
+V +V + I +E + +K +G+ I+PS V+ITKL
Sbjct: 66 EVSKVDYAGYKIIVEGVVNKKQDGTETAYPIHPSNVMITKL 106
>sp|A4FWB0|RL24_METM5 50S ribosomal protein L24P OS=Methanococcus maripaludis (strain C5
/ ATCC BAA-1333) GN=rpl24p PE=3 SV=1
Length = 119
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%)
Query: 8 SSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREG 67
S RK RKA + AP +R +M+A LS +L++K+N S+PV+K D V+V+RG +KG EG
Sbjct: 6 SKQPRKQRKALYNAPLHLRNSVMAAMLSKELKEKFNKNSLPVKKGDTVKVLRGNFKGIEG 65
Query: 68 KVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKL 108
+V +V + I +E + +K +G+ I+PS V+ITKL
Sbjct: 66 EVSKVDYAGYKIIVEGVVNKKQDGTETAYPIHPSNVMITKL 106
>sp|Q8ZTD4|RL24_PYRAE 50S ribosomal protein L24P OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=rpl24p PE=3 SV=1
Length = 123
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 8 SSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREG 67
S+ RK R++ + AP +RR L +A LS +L +K V+ +PVR+ D V ++RG +KG G
Sbjct: 6 SAQPRKQRRSLYKAPLHLRRKLFNAKLSPELAKKLGVKRLPVRRGDTVLILRGDFKGVTG 65
Query: 68 KVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRL-DKDRKSLLDRKAK 123
KVV+V ++ I++E TR G TV I+PSKV+I + L DK R+ +++R+ K
Sbjct: 66 KVVKVDLKRVRIYVEGATRTNSRGQTVYYPIHPSKVMIVDVDLSDKARQKIIERRKK 122
>sp|Q8PV39|RL24_METMA 50S ribosomal protein L24P OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=rpl24p PE=3 SV=1
Length = 122
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 64/110 (58%)
Query: 7 VSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGRE 66
VS RK RKA +TAP +R+ M A LS L ++Y RS V D V+++RG +KG E
Sbjct: 8 VSKQPRKQRKARYTAPLHIRQKFMGARLSEALAKQYGTRSAAVITGDTVKIMRGDFKGTE 67
Query: 67 GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKS 116
GKV V I ++ + KV+G+ V INPS V+ITKL + R++
Sbjct: 68 GKVQSVSLMDGTIAVDGVISTKVDGTEVPRPINPSNVMITKLEMKDGRRA 117
>sp|Q46GA6|RL24_METBF 50S ribosomal protein L24P OS=Methanosarcina barkeri (strain Fusaro
/ DSM 804) GN=rpl24p PE=3 SV=1
Length = 116
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 64/110 (58%)
Query: 7 VSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGRE 66
VS RK RKA + AP VR+ M A LS L ++Y RS V D V+V+RG YKG E
Sbjct: 2 VSKQPRKQRKARYNAPLHVRQKFMGARLSEALSKEYGTRSAAVIAGDTVKVMRGDYKGTE 61
Query: 67 GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKS 116
GKV V + I ++ + KV+G+ V I PS V+ITKL L +R++
Sbjct: 62 GKVQAVSLQDGTISVDGVISTKVDGTEVPRPIYPSNVMITKLELKDERRA 111
>sp|Q6LXE2|RL24_METMP 50S ribosomal protein L24P OS=Methanococcus maripaludis (strain S2
/ LL) GN=rpl24p PE=3 SV=1
Length = 119
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 65/101 (64%)
Query: 8 SSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREG 67
S RK RKA + AP +R +MSA L+ +L++KY S+PV+K D V+V+RG +KG EG
Sbjct: 6 SKQPRKQRKALYNAPLHLRNSVMSAMLAKELKEKYAKNSLPVKKGDTVKVLRGNFKGIEG 65
Query: 68 KVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKL 108
+V +V + I +E + +K +G+ I+PS V+ITKL
Sbjct: 66 EVSKVDYAGYKIIVEGVVNKKQDGNETAYPIHPSNVMITKL 106
>sp|A6UQ55|RL24_METVS 50S ribosomal protein L24P OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=rpl24p PE=3 SV=1
Length = 119
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 8 SSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREG 67
S RK RKA + AP +R +MSA LS L++KY ++PV+K D V+V+RG++KG EG
Sbjct: 6 SKQPRKQRKALYNAPLHLRNSVMSAMLSKALKEKYGKNALPVKKGDTVKVLRGSFKGIEG 65
Query: 68 KVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRK 115
+V +V + I +E + +K +G I+PS V+ITK+ D D K
Sbjct: 66 EVSKVNYSGYKIIVEGVVNKKQDGKETPYPIHPSNVMITKME-DSDEK 112
>sp|P14034|RL24_METVA 50S ribosomal protein L24P OS=Methanococcus vannielii GN=rpl24p
PE=3 SV=1
Length = 119
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 8 SSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREG 67
S RK RKA + AP +R +MSA LS L++KY ++PV+K D V+V+RG++KG EG
Sbjct: 6 SKQPRKQRKALYNAPLHLRNSVMSAMLSKALKEKYGKNALPVKKGDTVKVLRGSFKGIEG 65
Query: 68 KVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRK 115
+V +V + I +E + +K +G I+PS V+ITK+ D D K
Sbjct: 66 EVSKVNYSGYKIIVEGVVNKKQDGKETPYPIHPSNVMITKME-DSDEK 112
>sp|Q9UX95|RL24_SULSO 50S ribosomal protein L24P OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rpl24p PE=3 SV=1
Length = 119
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 69/109 (63%)
Query: 7 VSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGRE 66
VS K RK +T P R+ L+ A +S D+ +Y ++ + VRK D V+V+RG G+E
Sbjct: 2 VSLKPSKQRKLLYTLPLHQRKKLLVAKVSDDIASQYGIKRIRVRKGDTVRVMRGGNSGKE 61
Query: 67 GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRK 115
GKVV+V + + IE ITR+KV+G+ V V I+ SKV+ITKL L R+
Sbjct: 62 GKVVEVNTKTGRLAIEGITRKKVDGTPVYVWIHASKVMITKLDLSDPRR 110
>sp|Q8TRT6|RL24_METAC 50S ribosomal protein L24P OS=Methanosarcina acetivorans (strain
ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=rpl24p PE=3
SV=1
Length = 119
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 63/110 (57%)
Query: 7 VSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGRE 66
VS RK RKA + AP +R+ M A LS L ++Y RS V D V+V+RG +KG E
Sbjct: 5 VSKQPRKQRKARYAAPLHIRQKFMGARLSEALTKEYGTRSAAVITGDTVKVMRGDFKGTE 64
Query: 67 GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKS 116
GKV V I ++ + KV+G+ V +NPS V+ITKL + R++
Sbjct: 65 GKVQSVSLMDGTITVDGVISTKVDGTEVPRPLNPSNVMITKLEMKDGRRA 114
>sp|Q975J1|RL24_SULTO 50S ribosomal protein L24P OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=rpl24p PE=3 SV=2
Length = 137
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 77/129 (59%), Gaps = 3/129 (2%)
Query: 7 VSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYK--G 64
VS K R + P R L++A LS +L+Q+Y ++ + +RK D V+V+RG
Sbjct: 2 VSHKPSKQRLLLYNLPKHQRHKLLTAKLSKELQQQYGIKRLAIRKGDTVKVMRGDKDVLN 61
Query: 65 REGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRL-DKDRKSLLDRKAK 123
EGKVV+V R+ I IE +TR+K +G+ V I+ SKV+ITKL L D RK +++RK K
Sbjct: 62 FEGKVVEVNRKTGRIAIEGLTRKKADGTPVYRWIHASKVIITKLDLSDAKRKEIIERKRK 121
Query: 124 GRAAADKEK 132
R K+K
Sbjct: 122 AREEYLKKK 130
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,342,936
Number of Sequences: 539616
Number of extensions: 1808168
Number of successful extensions: 5795
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 5380
Number of HSP's gapped (non-prelim): 468
length of query: 146
length of database: 191,569,459
effective HSP length: 106
effective length of query: 40
effective length of database: 134,370,163
effective search space: 5374806520
effective search space used: 5374806520
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)