Query 032185
Match_columns 145
No_of_seqs 131 out of 1068
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 17:23:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032185.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032185hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ebw_A PER A 4 allergen; beta 100.0 3.5E-33 1.2E-37 204.1 15.0 120 2-124 2-162 (163)
2 2hzq_A Apolipoprotein D, APO-D 100.0 1.5E-29 5E-34 185.7 17.3 122 2-126 4-167 (174)
3 1qwd_A Outer membrane lipoprot 100.0 5.3E-30 1.8E-34 189.6 14.6 118 2-121 23-176 (177)
4 1gka_B Crustacyanin A2 subunit 100.0 1.5E-27 5.1E-32 174.4 13.9 121 2-125 10-173 (174)
5 1z24_A Insecticyanin A form; b 99.9 1.2E-27 4.2E-32 177.8 10.2 129 2-133 7-186 (189)
6 3fmz_A Retinol-binding protein 99.9 1E-25 3.6E-30 171.1 17.8 121 2-125 31-205 (212)
7 1gm6_A SAL, salivary lipocalin 99.9 3.3E-26 1.1E-30 168.0 14.5 121 3-127 3-165 (175)
8 1kxo_A DIGA16; lipocalin, anti 99.9 5.4E-27 1.8E-31 173.8 10.1 123 2-126 6-174 (184)
9 3s26_A Neutrophil gelatinase-a 99.9 9.6E-26 3.3E-30 167.9 15.9 122 2-126 11-181 (190)
10 3cbc_A Neutrophil gelatinase-a 99.9 1.6E-25 5.5E-30 166.9 16.0 117 5-124 34-196 (198)
11 1kt6_A RBP, plasma retinol-bin 99.9 1.1E-25 3.9E-30 165.7 14.6 125 2-127 2-179 (183)
12 1i4u_A Crustacyanin; lipocalin 99.9 2.4E-26 8.3E-31 170.0 10.8 120 2-125 10-176 (181)
13 3bx8_A Engineered human lipoca 99.9 1.4E-25 4.6E-30 164.8 14.7 118 4-124 13-177 (178)
14 2xst_A Lipocalin 15; transport 99.9 4.1E-26 1.4E-30 164.0 11.2 118 2-123 1-161 (161)
15 2l5p_A Lipocalin 12; beta barr 99.9 9.8E-25 3.3E-29 161.3 16.4 125 4-128 8-175 (184)
16 1bj7_A D 2; allergen, lipocali 99.9 3.9E-25 1.3E-29 159.2 13.8 112 8-123 2-155 (156)
17 1xki_A VON ebner'S gland prote 99.9 2E-25 6.7E-30 161.8 11.2 117 10-129 1-156 (162)
18 1ew3_A Allergen EQU C 1; lipoc 99.9 1E-24 3.4E-29 157.0 14.2 114 9-125 2-157 (159)
19 1epa_A Epididymal retinoic aci 99.9 4E-25 1.4E-29 159.7 10.7 116 8-124 1-156 (164)
20 1lf7_A Complement protein C8ga 99.9 1E-24 3.6E-29 160.9 12.9 115 5-123 14-169 (182)
21 3o22_A Prostaglandin-H2 D-isom 99.9 1.1E-24 3.7E-29 157.7 12.2 118 8-125 1-161 (162)
22 2ra6_A Trichosurin; lipocalin, 99.9 5.9E-24 2E-28 154.3 13.7 111 7-121 13-164 (166)
23 2hlv_A Odorant-binding protein 99.9 1.3E-23 4.4E-28 151.8 14.9 117 8-124 3-158 (160)
24 1exs_A Beta-lactoglobulin; lip 99.9 5.6E-24 1.9E-28 153.5 12.8 112 6-122 3-156 (160)
25 1beb_A Beta-lactoglobulin; lip 99.9 3E-24 1E-28 155.1 11.2 116 6-124 3-160 (162)
26 1dzk_A PIG OBP, odorant-bindin 99.9 1.4E-23 4.6E-28 151.0 13.8 116 8-123 2-156 (157)
27 2a2u_A Protein (alpha-2U-globu 99.9 7.6E-23 2.6E-27 149.8 15.1 116 6-125 22-179 (181)
28 1e5p_A Aphrodisin; lipocalin, 99.9 1.6E-22 5.6E-27 144.6 14.3 107 13-123 1-150 (151)
29 3qkg_A Protein AMBP; beta barr 99.9 3.6E-22 1.2E-26 149.0 13.6 118 5-125 8-172 (193)
30 3kff_A MUP 4, major urinary pr 99.9 4.8E-21 1.6E-25 138.8 14.1 114 8-125 5-160 (162)
31 3sao_A Extracellular fatty aci 99.8 1.5E-20 5.1E-25 136.0 12.2 115 13-130 3-159 (160)
32 3l4r_A Allergen DOG 2, minor a 99.8 4.3E-19 1.5E-23 129.8 11.9 115 7-125 4-160 (170)
33 3kq0_A Alpha-1-acid glycoprote 99.7 1.2E-18 4.1E-23 129.3 4.5 129 4-136 5-182 (192)
34 3fiq_A OBP1, RCG36470, odorant 99.7 2.7E-15 9.3E-20 108.3 13.4 116 9-124 3-156 (157)
35 1pm1_X Nitrophorin 2, NP2, pro 99.6 1.3E-15 4.3E-20 112.6 10.1 119 3-125 2-174 (180)
36 3ebk_A Allergen BLA G 4; beta 99.6 9.6E-16 3.3E-20 113.1 6.3 74 3-85 9-83 (176)
37 1x8p_A Nitrophorin 4, NP4; lip 99.6 1.6E-14 5.4E-19 107.1 10.5 119 3-125 1-174 (184)
38 4ge1_A Biogenic amine-binding 99.6 4.7E-14 1.6E-18 105.8 12.5 124 2-126 3-181 (197)
39 3cqn_A Violaxanthin DE-epoxida 99.5 8.4E-13 2.9E-17 97.6 13.8 119 5-128 10-179 (185)
40 3bx6_A Alpha-1-acid glycoprote 99.4 1.1E-13 3.8E-18 103.3 3.9 138 3-143 4-190 (192)
41 1avg_I Triabin; bovine thrombi 99.2 2.8E-12 9.5E-17 91.0 3.0 52 2-56 4-56 (142)
42 2yg2_A Apolipoprotein M; lipid 97.9 0.0003 1E-08 51.0 12.5 111 7-119 12-162 (172)
43 2l8n_A Transcriptional repress 70.8 2.4 8.2E-05 25.4 2.0 30 85-114 29-58 (67)
44 1uxc_A FRUR (1-57), fructose r 65.7 2.6 9E-05 25.1 1.5 31 85-115 20-53 (65)
45 3kzt_A Uncharacterized protein 55.2 15 0.0005 25.5 3.9 44 11-55 93-137 (143)
46 3tue_A Tryparedoxin peroxidase 39.1 11 0.00039 27.8 1.4 24 13-36 49-72 (219)
47 2k9i_A Plasmid PRN1, complete 37.0 5.2 0.00018 22.2 -0.6 25 91-115 15-39 (55)
48 2hsg_A Glucose-resistance amyl 36.8 22 0.00074 26.7 2.7 29 85-113 22-50 (332)
49 3h87_C Putative uncharacterize 36.6 32 0.0011 21.1 2.9 25 90-114 7-31 (73)
50 2cpg_A REPA protein, transcrip 36.6 4 0.00014 21.8 -1.1 24 91-114 8-31 (45)
51 1qpz_A PURA, protein (purine n 35.9 23 0.00078 26.7 2.7 29 85-113 20-48 (340)
52 3kjx_A Transcriptional regulat 35.7 25 0.00086 26.5 3.0 30 85-114 30-59 (344)
53 4fxe_A Antitoxin RELB; toxin/a 33.9 18 0.0006 22.4 1.5 22 92-113 8-29 (79)
54 3sbc_A Peroxiredoxin TSA1; alp 31.9 14 0.00048 27.2 0.9 24 12-35 44-67 (216)
55 3lhn_A Lipoprotein; structural 31.7 1.2E+02 0.004 20.3 7.4 40 36-75 39-81 (126)
56 3h5t_A Transcriptional regulat 29.4 22 0.00075 27.1 1.6 30 85-114 29-59 (366)
57 3fyr_A Sporulation inhibitor S 25.3 31 0.0011 19.4 1.4 26 89-114 3-28 (48)
58 3dbi_A Sugar-binding transcrip 25.0 15 0.00052 27.6 0.0 30 85-114 23-52 (338)
59 2bsq_E FITA, trafficking prote 22.8 87 0.003 19.1 3.2 23 90-112 6-28 (77)
60 2o20_A Catabolite control prot 21.9 19 0.00065 27.0 0.0 30 85-114 25-54 (332)
61 3e3m_A Transcriptional regulat 21.8 19 0.00066 27.3 0.0 30 85-114 32-61 (355)
62 2dmj_A Poly (ADP-ribose) polym 21.5 97 0.0033 19.9 3.4 24 90-113 82-105 (106)
63 3ctp_A Periplasmic binding pro 20.4 21 0.00073 26.7 0.0 30 85-114 22-51 (330)
64 1aoc_A Coagulogen; coagulation 20.4 53 0.0018 22.6 2.0 30 85-114 15-48 (175)
65 1jye_A Lactose operon represso 20.2 22 0.00074 27.0 0.0 30 85-114 23-52 (349)
66 3h5o_A Transcriptional regulat 20.0 22 0.00075 26.7 0.0 30 85-114 24-53 (339)
No 1
>3ebw_A PER A 4 allergen; beta barrel, cockroach; HET: PE4; 2.80A {Periplaneta americana}
Probab=100.00 E-value=3.5e-33 Score=204.10 Aligned_cols=120 Identities=21% Similarity=0.311 Sum_probs=109.2
Q ss_pred CCCCCCcccCCCCccccceeeEEEeEeCCcCCCCCCcceEEEEEECCCCcEEEEEeEEeCCeee-EEeeeEEEcCCCCCc
Q 032185 2 ASKKEMEVVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRNETWSDGKRG-SIEGTAYKADPKSDE 80 (145)
Q Consensus 2 ~~~p~v~~~~~Fdl~ry~G~WYeiar~p~~~e~~~~~c~~a~Y~~~~~g~i~V~n~~~~~G~~~-~~~G~a~~~~~~~~~ 80 (145)
+.||+++++++||++||+|+||||||+|+.||++|.+|++++|++.+||.|.|.|+| ++|.+. .+.|.|+++++. .+
T Consensus 2 ~~Cp~v~~~~~fdl~ry~G~WYeiar~~~~fe~~~~~~~~a~Y~l~~dg~i~V~n~~-~~g~~~~~~~G~a~~~~~~-~~ 79 (163)
T 3ebw_A 2 DSCQIGTSFTGLDMTKYVGTWYELFRTPNSDEEDFTNCEYDKYTLDENGVIQVTSVA-YTNSIRGFITSTGTVPSWT-ED 79 (163)
T ss_dssp CSCCCCCCCCCCCTTTTCEEEEEEEECCCSTTSSCCSCEEEEEEECTTSCEEEEEEE-ECSTTSSEEEEEEECCCBC-SS
T ss_pred CCCcCCCccCCCChHHhCEEeEEEEEeCcccccCcCccceEEEEECCCCeEEEEEEe-eCCeEEEEEEEEEEeCCCC-CC
Confidence 579999999999999999999999999999999754899999999999999999999 689898 999999887654 23
Q ss_pred ceeE----------------------------------------EeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCC
Q 032185 81 AKLK----------------------------------------ILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQS 120 (145)
Q Consensus 81 ~kl~----------------------------------------IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q~ 120 (145)
| |+ ||||+|+++++++++++++++++||+.++|++++|+
T Consensus 80 ~-l~v~f~~~~~~~~~y~Vl~tDY~~Ya~v~~c~~~~~~~~~~wilsR~~~l~~~~~~~~~~~~~~~G~~~~~l~~~~q~ 158 (163)
T 3ebw_A 80 T-FDIAYGDDETWSSTYFMVGTDYQTYSIVAGCLDNDYSRHLYWIASHETSFDDATKAKVNEVLAPYNLSLDDMEPVDQS 158 (163)
T ss_dssp E-EEEBC------CEEEEEEEECSSSCEEEEEEETTEEEEEEEEEEESSSSCCHHHHHHHHHHHGGGTCCGGGSEECCCC
T ss_pred c-eEEEeccCCCccccEEEEEeCCCCEEEEEEecCCCccceEEEEEeCCCCCCHHHHHHHHHHHHHcCCCHHHeEECCCC
Confidence 3 32 999999999999999999999999999999999999
Q ss_pred CCCC
Q 032185 121 DNPP 124 (145)
Q Consensus 121 ~c~~ 124 (145)
+|..
T Consensus 159 ~C~~ 162 (163)
T 3ebw_A 159 YCVQ 162 (163)
T ss_dssp TTTT
T ss_pred CCCC
Confidence 9964
No 2
>2hzq_A Apolipoprotein D, APO-D, APOD; lipocalin, beta barrel, bilin-binding protein, transport protein; HET: STR; 1.80A {Homo sapiens} PDB: 2hzr_A
Probab=99.97 E-value=1.5e-29 Score=185.72 Aligned_cols=122 Identities=31% Similarity=0.477 Sum_probs=110.6
Q ss_pred CCCCCCcccCCCCccccceeeEEEeEeCCcCCCCCCcceEEEEEECCCCcEEEEEeEEe-CCeeeEEeeeEEEcCCCCCc
Q 032185 2 ASKKEMEVVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRNETWS-DGKRGSIEGTAYKADPKSDE 80 (145)
Q Consensus 2 ~~~p~v~~~~~Fdl~ry~G~WYeiar~p~~~e~~~~~c~~a~Y~~~~~g~i~V~n~~~~-~G~~~~~~G~a~~~~~~~~~ 80 (145)
+.||.+++|++||++||+|+|||||++++.|+.. .|++++|++.++|.|.|.|.++. +|++..+.|.+++.++. .+
T Consensus 4 ~~C~~~~~~~~fd~~ry~G~WY~ia~~~~~f~~~--~c~~~~y~~~~dg~i~v~~~~~~~~g~~~~~~g~~~~~~~~-~~ 80 (174)
T 2hzq_A 4 GKCPNPPVQENFDVNKYPGRWYEIEKIPTTFENG--RCIQANYSLMENGKIKVLNQELRADGTVNQIEGEATPVNLT-EP 80 (174)
T ss_dssp SSCCCCCCCTTCCGGGSCEEEEEEEECCSCSSCC--EEEEEEEEECTTSCEEEEEEEECTTSCEEEEEEEEEESCSS-CT
T ss_pred CCCCCCCccCCCCHHHhCchhHhhcccCCccccC--cceEEEEEECCCCeEEEEEEEEcCCCCEEEEEEEEEecCCC-CC
Confidence 6799999999999999999999999999999874 89999999999999999999987 78888888999876554 35
Q ss_pred ceeE-----------------------------------------EeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC
Q 032185 81 AKLK-----------------------------------------ILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQ 119 (145)
Q Consensus 81 ~kl~-----------------------------------------IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q 119 (145)
|+|. ||+|+|+++++++++++++|+++||+.++|+.++|
T Consensus 81 g~~~v~f~~~~~~~~y~Vl~tDyd~yAiv~~~~~~~~~~~~~~~~ilsR~~~~~~~~~~~~~~~~~~~G~~~~~l~~~~q 160 (174)
T 2hzq_A 81 AKLEVKFSWFMPSAPYHILATDYENYALVYSCTSISQSFHVDFAWILARNVALPPETVDSLKNILTSNNIDVKKMTVTDQ 160 (174)
T ss_dssp TEEEEECSTTSCCEEEEEEEECSSSEEEEEEEEESSTTEEEEEEEEEESSSCCCHHHHHHHHHHHHHTTCCCTTCEECCC
T ss_pred cEEEEEccCccCCCcEEEEEECCCCEEEEEecccCCCcccceEEEEEECCCCCCHHHHHHHHHHHHHcCCCHHHeEECCC
Confidence 6543 99999999999999999999999999999999999
Q ss_pred CCCCCCc
Q 032185 120 SDNPPEA 126 (145)
Q Consensus 120 ~~c~~~~ 126 (145)
++|+++.
T Consensus 161 ~~~~~~~ 167 (174)
T 2hzq_A 161 VNCPKLS 167 (174)
T ss_dssp SSSCCC-
T ss_pred CCCcccc
Confidence 9998873
No 3
>1qwd_A Outer membrane lipoprotein BLC; bacterial lipocalin, lipid binding protein; 1.75A {Escherichia coli} SCOP: b.60.1.1 PDB: 2aco_A* 3mbt_A
Probab=99.97 E-value=5.3e-30 Score=189.63 Aligned_cols=118 Identities=36% Similarity=0.615 Sum_probs=109.2
Q ss_pred CCCCCCcccCCCCccccceeeEEEeEeCCcCCCCCCcceEEEEEECCCCcEEEEEeEEe--CCeeeEEeeeEEEcCCCCC
Q 032185 2 ASKKEMEVVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRNETWS--DGKRGSIEGTAYKADPKSD 79 (145)
Q Consensus 2 ~~~p~v~~~~~Fdl~ry~G~WYeiar~p~~~e~~~~~c~~a~Y~~~~~g~i~V~n~~~~--~G~~~~~~G~a~~~~~~~~ 79 (145)
+.||++++|++||++||+|+|||||++|+.|+++| .|++++|++.++|.|.|.|+|+. +|++..+.|.|+++++. .
T Consensus 23 ~~c~~v~~~~~FDl~ry~G~WYeia~~~~~fe~~~-~~~~a~ytl~~dG~i~V~n~~~~~~~g~~~~~~g~a~~~~~~-~ 100 (177)
T 1qwd_A 23 TPPRGVTVVNNFDAKRYLGTWYEIARFDHRFERGL-EKVTATYSLRDDGGLNVINKGYNPDRGMWQQSEGKAYFTGAP-T 100 (177)
T ss_dssp SCTTCEEEESSCCHHHHCEEEEEEEECCCGGGTTC-EEEEEEEEECTTSCEEEEEEEEETTTTEEEEEEEEEEESSCT-T
T ss_pred CCCCCCcccCCcccccceEEEEEEEEECchhhcCc-EeEEEEEEECCCCcEEEEEEEEecCCCCEEEEEEEEEECCCC-C
Confidence 35889999999999999999999999999999876 89999999999999999999998 59999999999998765 4
Q ss_pred cceeE----------------------------------EeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCCC
Q 032185 80 EAKLK----------------------------------ILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQSD 121 (145)
Q Consensus 80 ~~kl~----------------------------------IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q~~ 121 (145)
+|+|+ ||||+|+++++.+++++++++++|||.++|++++|++
T Consensus 101 ~gkl~v~f~~p~~~~y~Vl~tD~~Ya~~~v~~~~~~~~wILsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q~~ 176 (177)
T 1qwd_A 101 RAALKVSFFGPFYGGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDEVKQEMLAVATREGFDVSKFIWVQQPG 176 (177)
T ss_dssp SCEEEEEEETTEEEEEEEEEEBTTSSEEEEECSSTTCEEEEESSSSCCHHHHHHHHHHHHHTTCCGGGCEECCCCC
T ss_pred CcEEEEEecCCccceEEEEEECCCeeEEEEecCCCcEEEEEECCCCCCHHHHHHHHHHHHHcCCCHHHeEECCCCC
Confidence 68764 9999999999999999999999999999999999975
No 4
>1gka_B Crustacyanin A2 subunit; lipocalin, lobster, astaxanthin, bathochromic, coloration; HET: AXT D12 EPE; 3.23A {Homarus gammarus} SCOP: b.60.1.1
Probab=99.95 E-value=1.5e-27 Score=174.40 Aligned_cols=121 Identities=17% Similarity=0.322 Sum_probs=107.6
Q ss_pred CCCCCCcccCCCCccccceeeEEEeEeCCcCCCCCCcceEEEEEECCC--CcEEEEEeEEe-CCeeeEEeeeEEEcCCCC
Q 032185 2 ASKKEMEVVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNED--GTVHVRNETWS-DGKRGSIEGTAYKADPKS 78 (145)
Q Consensus 2 ~~~p~v~~~~~Fdl~ry~G~WYeiar~p~~~e~~~~~c~~a~Y~~~~~--g~i~V~n~~~~-~G~~~~~~G~a~~~~~~~ 78 (145)
+.|+.++++++||++||+|+|||||++++.|++.+ .|++++|++.++ | +.|.|.++. +|.+..+.|.+++.+..
T Consensus 10 ~~C~~~~~~~~fd~~ry~G~WY~ia~~~~~~e~~~-~c~~a~y~~~~d~~g-i~v~~~~~~~~g~~~~~~g~~~~~~~~- 86 (174)
T 1gka_B 10 GKCASVANQDNFDLRRYAGRWYQTHIIENAYQPVT-RCIHSNYEYSTNDYG-FKVTTAGFNPNDEYLKIDFKVYPTKEF- 86 (174)
T ss_dssp SCCCCCCCCSSCCTTTTCEEEEEEEECCCTTCCCC-EEEEEEEEEETTTTE-EEEEEEEECSSSCEEEECCEEECBTTB-
T ss_pred CCCCCCCccCCCChHHhCeeeeEEEeeccccccCc-eeEEEEEEECCCCCc-eEEEEEEEccCCCEEEEEEEEEecCCC-
Confidence 57999999999999999999999999999998865 899999999988 8 999999987 78888888888875543
Q ss_pred CcceeE---------------------------------------EeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC
Q 032185 79 DEAKLK---------------------------------------ILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQ 119 (145)
Q Consensus 79 ~~~kl~---------------------------------------IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q 119 (145)
.+|+|. ||||+|+++++++++++++++++||+.++|+.++|
T Consensus 87 ~~~~l~v~~~~~~~~~y~Vl~tDy~~yAiv~~~~~~~~~~~~~~~llsR~~~~~~~~~~~~~~~~~~~G~~~~~l~~~~q 166 (174)
T 1gka_B 87 PAAHMLIDAPSVFAAPYEVIETDYETYSCVYSCITTDNYKSEFAFVFSRTPQTSGPAVEKTAAVFNKNGVEFSKFVPVSH 166 (174)
T ss_dssp CTTEEEEECSSSCCEEEEEEEECSSSEEEEEEEEECSSEEEEEEEEEESSCCSSSHHHHHHHHHHHHHTCCGGGCEECBC
T ss_pred CCcEEEEeccCCCcccEEEEEecCCCEEEEEeccccCCccceEEEEEECCCCCCHHHHHHHHHHHHHcCCCHHHeEECCC
Confidence 345553 99999999999999999999999999999999999
Q ss_pred C-CCCCC
Q 032185 120 S-DNPPE 125 (145)
Q Consensus 120 ~-~c~~~ 125 (145)
+ .|...
T Consensus 167 ~~~C~~~ 173 (174)
T 1gka_B 167 TAECVYR 173 (174)
T ss_dssp CTTCCCC
T ss_pred CCCCCCC
Confidence 6 88543
No 5
>1z24_A Insecticyanin A form; blue biliprotein, INS-A, chromophore binding., lipid binding protein; HET: BLV; 2.60A {Manduca sexta} SCOP: b.60.1.1
Probab=99.95 E-value=1.2e-27 Score=177.77 Aligned_cols=129 Identities=22% Similarity=0.275 Sum_probs=110.8
Q ss_pred CCCCCCcccCCCCccccceeeEEEeEeCCcCCCCCCcceEEEEEECCCCcEEEEEeEEeCCeeeEEeeeEEE-cCC--CC
Q 032185 2 ASKKEMEVVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRNETWSDGKRGSIEGTAYK-ADP--KS 78 (145)
Q Consensus 2 ~~~p~v~~~~~Fdl~ry~G~WYeiar~p~~~e~~~~~c~~a~Y~~~~~g~i~V~n~~~~~G~~~~~~G~a~~-~~~--~~ 78 (145)
+.||.++++++||++||+|+|||||++++.|+++ ..|++++|++.++| |.|.|.+..+|.+..+.|.+++ +++ .
T Consensus 7 ~~C~~~~~~~~Fd~~ry~G~WYeia~~~~~~~~~-~~c~~a~y~~~~dg-i~V~~~~~~~g~~~~~~g~~~~~~~~~~~- 83 (189)
T 1z24_A 7 GYCPDVKPVNDFDLSAFAGAWHEIAKLPLENENQ-GKCTIAEYKYDGKK-ASVYNSFVSNGVKEYMEGDLEIAPDAKYT- 83 (189)
T ss_dssp SSCCCCCCCSSCCHHHHCEEEEEEEECCCGGGTT-CEEEEEEEEECSSC-EEEEEEEEETTEEEEEEEEEEECTTHHHH-
T ss_pred CCCCCCCccCCCChHHhCeEeEEEEeeccccccC-ceeEEEEEEECCCC-EEEEEEEEeCCCEEEEEEEEEEccCCCcC-
Confidence 5799999999999999999999999999999976 48999999999999 9999998878888888888776 433 1
Q ss_pred Cccee--------------------------------------------EEeecCCCCCHHHHHHHHHHHH--hcCCCCC
Q 032185 79 DEAKL--------------------------------------------KILCREPHMDEAIYNQLVEKAT--SEGYDVS 112 (145)
Q Consensus 79 ~~~kl--------------------------------------------~IlsR~p~l~~~~~~~~~~~~~--~~G~d~~ 112 (145)
.+|+| .||+|+|+++++++++++++|+ ++||+.+
T Consensus 84 ~~g~~~v~f~~~~~~~~~~y~Vl~tDY~~Yaivy~C~~~~~~~~~~~~~~iLsR~~~~~~~~~~~~~~~~~~~~~G~d~~ 163 (189)
T 1z24_A 84 KQGKYVMTFKFGQRVVNLVPWVLATDYKNYAINYNCDYHPDKKAHSIHAWILSKSKVLEGNTKEVVDNVLKTFSHLIDAS 163 (189)
T ss_dssp CCSBEEEEEEETTEEEEECCEEEEECSSSEEEEEEEEEETTTTEEEEEEEEEESSSSCCTHHHHHHHHHHHTTTTTCCGG
T ss_pred CCceEEEEccCCCcCCCccEEEEEeCCCcEEEEEEEEeeccCCCCceEEEEEECCCCCCHHHHHHHHHHHhhhhcCCCHH
Confidence 12321 0999999999999999999999 9999999
Q ss_pred CeEEcC--CCCCCCCcCCCCCCC
Q 032185 113 KLHRTP--QSDNPPEAEESPQDT 133 (145)
Q Consensus 113 ~l~~~~--q~~c~~~~~~~~~~~ 133 (145)
+|+.++ |..|.+..++++-+.
T Consensus 164 ~l~~~~q~~~~C~~~~~~~~~~~ 186 (189)
T 1z24_A 164 KFISNDFSEAACQYSTTYSLTGP 186 (189)
T ss_dssp GCEECCCCHHHHCCSEEEESSBS
T ss_pred HEEECCCCcCCCCCccccCCCCC
Confidence 999999 578988877665544
No 6
>3fmz_A Retinol-binding protein 4; disease mutation, secreted, sensory transduction, transport, vision, vitamin A, transport protein; HET: 2T1; 2.90A {Homo sapiens}
Probab=99.94 E-value=1e-25 Score=171.09 Aligned_cols=121 Identities=15% Similarity=0.225 Sum_probs=97.8
Q ss_pred CCCC--CCcccCCCCccccceeeEEEeEeCCcCCCCCCcceEEEEEECCCCcEEEEEeEEe--CCee-eEEeeeEEEcCC
Q 032185 2 ASKK--EMEVVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRNETWS--DGKR-GSIEGTAYKADP 76 (145)
Q Consensus 2 ~~~p--~v~~~~~Fdl~ry~G~WYeiar~p~~~e~~~~~c~~a~Y~~~~~g~i~V~n~~~~--~G~~-~~~~G~a~~~~~ 76 (145)
+.|| +++++++||++||+|+|||||++|+.++..+ .|++++|++.+||.|.|.|.|.. .+.+ ..+.|.|+++++
T Consensus 31 g~C~~~~v~~v~~FDl~ry~G~WYeIar~~~~~e~~~-~~~tA~Ytl~~dG~i~V~n~g~~~~~~~~~~C~~g~a~~~~~ 109 (212)
T 3fmz_A 31 RDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQ-DNIVAEFSVDETGQMSATAKGRVRLLNNWDVCADMVGTFTDT 109 (212)
T ss_dssp CCCCGGGCCCCTTCCGGGGCEEEEEEEEECCSSCCCC-EEEEEEEEECTTSCEEEEEEEEEEETTTEEEEEEEEEEEECC
T ss_pred CCCCCCCCccCCCcCHHHhCccceEEEEecCCccccc-ccceeEEEECCCCeEEEEeccccccCCCCceEEEEEEEEccC
Confidence 4577 7999999999999999999999999999864 89999999999999999998864 3333 346666666554
Q ss_pred CCCcceeE------------------------------------------------EeecCCC-CCHHHHHHHHHHHHhc
Q 032185 77 KSDEAKLK------------------------------------------------ILCREPH-MDEAIYNQLVEKATSE 107 (145)
Q Consensus 77 ~~~~~kl~------------------------------------------------IlsR~p~-l~~~~~~~~~~~~~~~ 107 (145)
. .+|+|+ ||||+|+ +++++++++.++++ .
T Consensus 110 ~-~pgkl~V~f~g~~~~~~~~~~~y~Vl~TDY~~Yaiv~~c~~~~~~~~~~~~~~wilsR~p~~l~~~~~~~~~~~~~-~ 187 (212)
T 3fmz_A 110 E-DPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQE-E 187 (212)
T ss_dssp S-STTEEEEEEEECSSCCCEEEEEEEEEEECSSSEEEEEEEEEECTTSSEEEEEEEEEESSTTCCCHHHHHHHHHHHH-H
T ss_pred C-CCcEEEEEeccccccccCCcceEEEEEecCCCeEEEEEEcccccCCCccceEEEEEccCCCCCCHHHHHHHHHHHH-h
Confidence 3 334432 9999999 99999999988655 5
Q ss_pred CCCCCCeEEcCCCCCCCC
Q 032185 108 GYDVSKLHRTPQSDNPPE 125 (145)
Q Consensus 108 G~d~~~l~~~~q~~c~~~ 125 (145)
|++.++|++++|++-|+.
T Consensus 188 g~d~~~l~~~~q~~~C~~ 205 (212)
T 3fmz_A 188 LCLARQYRLIVHNGYCDG 205 (212)
T ss_dssp TTCTTCCEECCCCSCC--
T ss_pred CCChHHeEECCCCCcCCC
Confidence 899999999999974443
No 7
>1gm6_A SAL, salivary lipocalin; odorant-binding protein; HET: NAG; 2.13A {Sus scrofa} SCOP: b.60.1.1
Probab=99.94 E-value=3.3e-26 Score=168.04 Aligned_cols=121 Identities=11% Similarity=0.133 Sum_probs=100.7
Q ss_pred CCCCCcccCCCCccccceeeEEEeEeCCcC----CCCCCcceEEEEEECCCCcEEEEEeEEeCCeeeEEeeeEEEcCCCC
Q 032185 3 SKKEMEVVRGLDIKRYMGRWYEIASFPSRN----QPKNGADTRATYTLNEDGTVHVRNETWSDGKRGSIEGTAYKADPKS 78 (145)
Q Consensus 3 ~~p~v~~~~~Fdl~ry~G~WYeiar~p~~~----e~~~~~c~~a~Y~~~~~g~i~V~n~~~~~G~~~~~~G~a~~~~~~~ 78 (145)
+..+++++++||++||+|+||+||++++.+ ++++.+|.+++|++.++|+|.|.|.+..+|.+..+.|.+...++
T Consensus 3 ~~~~~~~~~~fd~~r~~G~WY~ia~~~~~~~~~~e~~~~~~~~~~~~~~~dg~l~v~~~~~~~g~c~~~~~~a~~~~~-- 80 (175)
T 1gm6_A 3 EAGQDVVTSNFDASKIAGEWYSILLASDAKENIEENGSMRVFVEHIRVLDNSSLAFKFQRKVNGECTDFYAVCDKVGD-- 80 (175)
T ss_dssp -----CBCSCCCSTTTCEECEEEEEEETTGGGGSTTCTTCCEEEEEEECTTSCEEEEEEEEETTEEEEEEEEEEEEET--
T ss_pred cccccCcccCCCchhcceeeeEEEEEEcChhhcccCCccEEEEEEEEEcCCCcEEEEEEeeeCCcccEEEEEEEECCC--
Confidence 456789999999999999999999999877 66556899999999999999999999888988888887765541
Q ss_pred CcceeE-------------------------------------EeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCC-
Q 032185 79 DEAKLK-------------------------------------ILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQS- 120 (145)
Q Consensus 79 ~~~kl~-------------------------------------IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q~- 120 (145)
|+|. ||||+|+++++++++++++++++||+.++|++++|.
T Consensus 81 --g~~~v~~~g~~~~~Vl~tDY~~Yaiv~~~~~~~g~~~~~~~llsR~~~l~~e~~~~f~~~~~~~G~~~~~i~~~~q~~ 158 (175)
T 1gm6_A 81 --GVYTVAYYGENKFRLLEVNYSDYVILHLVDVNGDKTFQLMEFYGRKPDVEPKLKDKFVEICQQYGIIKENIIDLTKID 158 (175)
T ss_dssp --TEEEEESSSEEEEEEEEEETTTEEEEEEEEEETTEEEEEEEEEESSSCCCHHHHHHHHHHHHTTTCCGGGEEEGGGSC
T ss_pred --CEEEEecCCceEEEEEEeCCCcEEEEEEEEcCCCeEEEEEEEEecCCCCCHHHHHHHHHHHHHcCCCHHHEEECCCCC
Confidence 3322 999999999999999999999999999999998887
Q ss_pred CCCCCcC
Q 032185 121 DNPPEAE 127 (145)
Q Consensus 121 ~c~~~~~ 127 (145)
.|.+.++
T Consensus 159 ~C~~~~~ 165 (175)
T 1gm6_A 159 RCFQLRG 165 (175)
T ss_dssp CCGGGCC
T ss_pred cCcCccc
Confidence 5865444
No 8
>1kxo_A DIGA16; lipocalin, anticalin, genetical engineering, digoxigenin, ligand binding protein; 1.80A {Pieris brassicae} SCOP: b.60.1.1 PDB: 1lke_A* 1lnm_A* 1n0s_A* 1t0v_A 1bbp_A*
Probab=99.94 E-value=5.4e-27 Score=173.77 Aligned_cols=123 Identities=23% Similarity=0.267 Sum_probs=101.1
Q ss_pred CCCCCCcccCCCCccccceeeEEEeEeCCcCCCCCCcceEEEEEECCCCcEEEEEeEEeCCeeeEEeeeEEE-cCC----
Q 032185 2 ASKKEMEVVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRNETWSDGKRGSIEGTAYK-ADP---- 76 (145)
Q Consensus 2 ~~~p~v~~~~~Fdl~ry~G~WYeiar~p~~~e~~~~~c~~a~Y~~~~~g~i~V~n~~~~~G~~~~~~G~a~~-~~~---- 76 (145)
+.||.+++|++||++||+|+|||||++++.|++.+ .|++++|++.++| |.|.|.++.+|.+..+.|.+++ +++
T Consensus 6 ~~C~~~~~~~~fd~~ry~G~WYeia~~~~~~~~~~-~c~~a~y~~~~dg-i~v~~~~~~~g~~~~~~g~a~~~~~~~~g~ 83 (184)
T 1kxo_A 6 GACPEVKPVDNFDWSQYHGKWWQVAAYPDHITKYG-KCGWAEYTPEGKS-VKVSRYSVIHGKEYFSEGTAYPVGDSKIGK 83 (184)
T ss_dssp SSCCCCCCCSCCCGGGCCEEEEEEEECHHHHHHHC-EEEEEEEEECSSS-EEEEEEEEETTEEEEEEEEEEECSSGGGCE
T ss_pred CCCCCCCccCCCChHHhCEEeEEEEeECCccccCc-eeEEEEEEECCCC-EEEEEEEEeCCCEEEEEEEEEEecCCCCCE
Confidence 57999999999999999999999999999998754 8999999999999 9999999877877777777765 331
Q ss_pred ---------------------CCCcce--------e---------EEeecCCCCCHHHHHHHHHHHH-hcCCCCCCeEEc
Q 032185 77 ---------------------KSDEAK--------L---------KILCREPHMDEAIYNQLVEKAT-SEGYDVSKLHRT 117 (145)
Q Consensus 77 ---------------------~~~~~k--------l---------~IlsR~p~l~~~~~~~~~~~~~-~~G~d~~~l~~~ 117 (145)
++++.. + .||||+|+++++++++++++++ ++||+.++|+.+
T Consensus 84 ~~v~f~~~~~~p~~~y~Vl~tDY~~Yaivy~C~~~~~~~~~~~~~wiLsR~~~~~~~~~~~~~~~~~~~~G~~~~~l~~~ 163 (184)
T 1kxo_A 84 IYHSYTIGGVTQEGVFNVLSTDNKNYIIGYFCSYDEDKKGHMDLVWVLSRSMVLTGEAKTAVENYLIGSPVVDSQKLVYS 163 (184)
T ss_dssp EEEEEC--CCCEEEEEEEEEECSSSEEEEEEEECC--CSEEEEEEEEEESSSSCCHHHHHHHHHHTTSCSSCCGGGCEEC
T ss_pred EEEECcCCCcCccccEEEEEeCCCCEEEEEEEeeeeccCCCccEEEEEEcCCCCCHHHHHHHHHHHHHhcCCCHHHeEEC
Confidence 111111 0 0999999999999999999999 999999999999
Q ss_pred CCC--CCCCCc
Q 032185 118 PQS--DNPPEA 126 (145)
Q Consensus 118 ~q~--~c~~~~ 126 (145)
+|+ .|...+
T Consensus 164 ~q~~~~C~~~~ 174 (184)
T 1kxo_A 164 DFSEAACKVNN 174 (184)
T ss_dssp CCCC--CC---
T ss_pred CCCCCCCCCCC
Confidence 965 586543
No 9
>3s26_A Neutrophil gelatinase-associated lipocalin; beta-barrel, siderophore binding protein, N-linked glycosyla secreted, transport protein; HET: NAG BMA MAN; 1.80A {Mus musculus} SCOP: b.60.1.1 PDB: 2k23_A
Probab=99.94 E-value=9.6e-26 Score=167.90 Aligned_cols=122 Identities=14% Similarity=0.150 Sum_probs=101.6
Q ss_pred CCCCCCcccCCCCccccceeeEEEeEeCCcCCCC-C--CcceEEEEEECCCCcEEEEEeEEeC--CeeeEEeeeEEEcCC
Q 032185 2 ASKKEMEVVRGLDIKRYMGRWYEIASFPSRNQPK-N--GADTRATYTLNEDGTVHVRNETWSD--GKRGSIEGTAYKADP 76 (145)
Q Consensus 2 ~~~p~v~~~~~Fdl~ry~G~WYeiar~p~~~e~~-~--~~c~~a~Y~~~~~g~i~V~n~~~~~--G~~~~~~G~a~~~~~ 76 (145)
+.|+.+++++|||++||+|+||+||++++.++.. | .++.+++|++.++|.|.|.|++++. |++..+.|.+...+.
T Consensus 11 ~~~~~v~~~~~fd~~r~~G~WY~Ia~a~~~~~~~~~~~~~~~~a~y~l~~dg~l~V~~~~~~~~~g~c~~~~~~a~~t~~ 90 (190)
T 3s26_A 11 PSLLTVPLQPDFRSDQFRGRWYVVGLAGNAVQKKTEGSFTMYSTIYELQENNSYNVTSILVRDQDQGCRYWIRTFVPSSR 90 (190)
T ss_dssp CCTTTSCCCTTCCTTTTCEEEEEEEEEETTCCCC---CEECCEEEEEECTTSCEEEEEEEEC----CEEEEEEEEEECSS
T ss_pred CChhcCCcCCCCChHHcCeeceEEEEEeCChhhhhcCCceeEEEEEEECCCCcEEEEEEEEeCCCCcceEEEEEEEEcCC
Confidence 4578899999999999999999999999998864 2 2579999999999999999999874 888888888765321
Q ss_pred CCCcceeE-------------------------------------------EeecCCCCCHHHHHHHHHHHHhcCCCCCC
Q 032185 77 KSDEAKLK-------------------------------------------ILCREPHMDEAIYNQLVEKATSEGYDVSK 113 (145)
Q Consensus 77 ~~~~~kl~-------------------------------------------IlsR~p~l~~~~~~~~~~~~~~~G~d~~~ 113 (145)
+|+|. ||||+|+++++++++++++++++||+.++
T Consensus 91 ---~gk~~v~~~~~~~g~~~~~~~Vl~tDY~~yaiv~~~~~~~~~~~~~~~llsR~~~l~~e~~~~f~~~~~~~G~~~~~ 167 (190)
T 3s26_A 91 ---AGQFTLGNMHRYPQVQSYNVQVATTDYNQFAMVFFRKTSENKQYFKITLYGRTKELSPELKERFTRFAKSLGLKDDN 167 (190)
T ss_dssp ---TTEEEESCGGGCTTEEEEEEEEEEECSSSEEEEEEEEEETTEEEEEEEEEESSSCCCHHHHHHHHHHHHHTTCCGGG
T ss_pred ---CCeEEECCcccCCCcCceeEEEEEeCCCcEEEEEEEEecCCccEEEEEEecCCCCCCHHHHHHHHHHHHHcCCCHHH
Confidence 22221 99999999999999999999999999999
Q ss_pred eEEcCCC-CCCCCc
Q 032185 114 LHRTPQS-DNPPEA 126 (145)
Q Consensus 114 l~~~~q~-~c~~~~ 126 (145)
|++++|. .|.+..
T Consensus 168 ii~~~q~~~C~~~~ 181 (190)
T 3s26_A 168 IIFSVPTDQCIDNS 181 (190)
T ss_dssp EEEEECCSSSTTCC
T ss_pred EEECCCCCcccCcc
Confidence 9999997 565543
No 10
>3cbc_A Neutrophil gelatinase-associated lipocalin; siderocalin, NGAL, enterobactin, glycoprotein, pyrroli carboxylic acid, secreted; HET: DBS; 2.17A {Homo sapiens} PDB: 3hwg_A* 3hwf_A* 3hwe_A* 3u03_A* 3u0d_A* 3cmp_A* 3i0a_A* 3hwd_A 3t1d_A* 3by0_A*
Probab=99.94 E-value=1.6e-25 Score=166.88 Aligned_cols=117 Identities=12% Similarity=0.176 Sum_probs=100.1
Q ss_pred CCCcccCCCCccccceeeEEEeEeCCcC---CCCCCcceEEEEEECCCCcEEEEEeEEeCCeeeEEeeeEEEcCCCCCcc
Q 032185 5 KEMEVVRGLDIKRYMGRWYEIASFPSRN---QPKNGADTRATYTLNEDGTVHVRNETWSDGKRGSIEGTAYKADPKSDEA 81 (145)
Q Consensus 5 p~v~~~~~Fdl~ry~G~WYeiar~p~~~---e~~~~~c~~a~Y~~~~~g~i~V~n~~~~~G~~~~~~G~a~~~~~~~~~~ 81 (145)
++++++++||++||+|+|||||++++.+ ++++.+|.+++|++.++|++.|.|++..+|++..+.|.++..+.. |
T Consensus 34 ~~v~~~~~fd~~r~~G~WY~ia~~~~~~~~~e~~~~~~~~a~~~~~~dg~l~v~~~~~~~g~c~~~~~~~~~~~~~---g 110 (198)
T 3cbc_A 34 SKVPLQQNFQDNQFQGKWYVVGLAGNAILREDKDPQKMYATIYELKEDKSYNVTSVLFRKKKCDYWIRTFVPGSQP---G 110 (198)
T ss_dssp GGSCCCTTCCTTTTCEEEEEEEEEESSCCCCSSSCCBCCEEEEEECTTSCEEEEEEEEETTEEEEEEEEEEECSST---T
T ss_pred ccCCcCCCCChHHhCeEeEEEEEEeccccccccCCceeEeEEEEECCCCCEEEEEEeecCCeeeeEEEEEEECCCC---C
Confidence 4588999999999999999999999887 766558999999999999999999998888888888777654321 2
Q ss_pred eeE-------------------------------------------EeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcC
Q 032185 82 KLK-------------------------------------------ILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTP 118 (145)
Q Consensus 82 kl~-------------------------------------------IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~ 118 (145)
+|. ||||+|+++++++++++++++++||+.++|+.++
T Consensus 111 ~~~v~~~~~~~~~~~~~~~vldtdY~~yaiv~~~~~~~g~~~~~~~llsR~~~l~~e~~~~f~~~~~~~G~~~~~i~~~~ 190 (198)
T 3cbc_A 111 EFTLGNIKSYPGLTSFLVRVVSTNYNQHAMVFFKKVSQNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPV 190 (198)
T ss_dssp EEEETTGGGSTTEEEEEEEEEEECSSSEEEEEEEEEETTEEEEEEEEEESSSCCCHHHHHHHHHHHHHTTCCGGGEECCB
T ss_pred EEEEecccccCCCCcceEEEEEcCCCcEEEEEEEeccCCEEEEEEEEEcCCCCCCHHHHHHHHHHHHHcCCCHHHEEecC
Confidence 110 9999999999999999999999999999999998
Q ss_pred CCCCCC
Q 032185 119 QSDNPP 124 (145)
Q Consensus 119 q~~c~~ 124 (145)
|.+.|+
T Consensus 191 q~~~C~ 196 (198)
T 3cbc_A 191 PIDQCI 196 (198)
T ss_dssp CCCTTT
T ss_pred CCCCcC
Confidence 876433
No 11
>1kt6_A RBP, plasma retinol-binding protein; transport protein; HET: RTL; 1.10A {Bos taurus} SCOP: b.60.1.1 PDB: 1erb_A* 1fem_A* 1fen_A* 1hbp_A* 1fel_A* 1kt4_A* 1kt3_A* 1kt7_A* 1hbq_A 1aqb_A* 1kt5_A* 1rlb_E* 1rbp_A* 1brq_A 1brp_A* 1jyd_A 1jyj_A 2wqa_E* 3bsz_E* 1qab_E* ...
Probab=99.94 E-value=1.1e-25 Score=165.69 Aligned_cols=125 Identities=14% Similarity=0.203 Sum_probs=96.1
Q ss_pred CCCC--CCcccCCCCccccceeeEEEeEeCCcCCCCCCcceEEEEEECCCCcEEEEEeEEe--CCee-eEEeeeEEE---
Q 032185 2 ASKK--EMEVVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRNETWS--DGKR-GSIEGTAYK--- 73 (145)
Q Consensus 2 ~~~p--~v~~~~~Fdl~ry~G~WYeiar~p~~~e~~~~~c~~a~Y~~~~~g~i~V~n~~~~--~G~~-~~~~G~a~~--- 73 (145)
..|| +++++++||++||+|+|||||++++.++..+ .|++++|++.++|.|.|.+.++. .|.+ ....|.+++
T Consensus 2 ~~C~~~~~~~~~~fd~~ry~G~WY~ia~~~~~~~~~~-~~~~a~y~~~~~g~i~v~~~g~~~~~~~~~~C~~~~~~~~~~ 80 (183)
T 1kt6_A 2 RDCRVSSFRVKENFDKARFAGTWYAMAKKDPEGLFLQ-DNIVAEFSVDENGHMSATAKGRVRLLNNWDVCADMVGTFTDT 80 (183)
T ss_dssp CCCBGGGCCCCTTCCHHHHCEEEEEEEEECCSSSCCC-EEEEEEEEECTTSCEEEEEEEEEECTTSCEEEEEEEEEEEEC
T ss_pred CCCCCCCCCccCCCChHHhCEeceEEEEecccccccc-ceeeEEEEEecCCeEEEEecceecccCcceeEEEEEEEeccC
Confidence 4688 8999999999999999999999999887764 89999999999999999988764 3332 123333322
Q ss_pred --------------------------cCCCCCc-------------ce-----eEEeecCCCCCHHHHHHHHHHHHhcCC
Q 032185 74 --------------------------ADPKSDE-------------AK-----LKILCREPHMDEAIYNQLVEKATSEGY 109 (145)
Q Consensus 74 --------------------------~~~~~~~-------------~k-----l~IlsR~p~l~~~~~~~~~~~~~~~G~ 109 (145)
.++++++ |. +.||||+|+++++.+++++++++++||
T Consensus 81 ~~~g~~~v~f~g~~~~~~~~~~~y~Vl~tDY~~Ya~~~~c~~~~~~g~~~~~~~wllsR~~~~~~~~~~~~~~~~~~~G~ 160 (183)
T 1kt6_A 81 EDPAKFKMKYWGVASFLQKGNDDHWIIDTDYETFAVQYSCRLLNLDGTCADSYSFVFARDPSGFSPEVQKIVRQRQEELC 160 (183)
T ss_dssp SSTTEEEEEEEESSTTSCCEEEEEEEEEECSSSEEEEEEEEEECTTSBEEEEEEEEEESSSSCCCHHHHHHHHHHHHHTT
T ss_pred CCCcEEEEEecCcccccccCcCCEEEEEeCCCCEEEEEEEcccccCCCccceEEEEEEcCCCCCHHHHHHHHHHHHHcCC
Confidence 2222111 10 119999999999999999999999999
Q ss_pred CCCCeEEcCCCC-CCCCcC
Q 032185 110 DVSKLHRTPQSD-NPPEAE 127 (145)
Q Consensus 110 d~~~l~~~~q~~-c~~~~~ 127 (145)
+.++|++++|++ |.+.++
T Consensus 161 ~~~~l~~~~q~~~C~~~~~ 179 (183)
T 1kt6_A 161 LARQYRLIPHNGYCDGKSE 179 (183)
T ss_dssp CTTCCEECCCCSSCC----
T ss_pred CHHHEEEcCCCCcCCCCcc
Confidence 999999999987 876633
No 12
>1i4u_A Crustacyanin; lipocalin fold, antiparallel beta barrel, transport protein; 1.15A {Synthetic} SCOP: b.60.1.1 PDB: 1obq_A 1obu_A 1s2p_A 1h91_A 1gka_A 1s44_A
Probab=99.94 E-value=2.4e-26 Score=169.96 Aligned_cols=120 Identities=18% Similarity=0.284 Sum_probs=105.8
Q ss_pred CCCCCCcccCCC-----CccccceeeEEEeEeCCcCCCCCCcceEEEEEECCCCcEEEEEeEEe-CCeeeEEeeeEEEcC
Q 032185 2 ASKKEMEVVRGL-----DIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRNETWS-DGKRGSIEGTAYKAD 75 (145)
Q Consensus 2 ~~~p~v~~~~~F-----dl~ry~G~WYeiar~p~~~e~~~~~c~~a~Y~~~~~g~i~V~n~~~~-~G~~~~~~G~a~~~~ 75 (145)
+.||.++++++| |++||+|+|||||++++.|++. ..|++++|++.++| +.|.|.++. +|.+..+.|.+++ +
T Consensus 10 ~~C~~~~~~~~f~~~~~d~~ry~G~WY~ia~~~~~~e~~-~~c~~a~y~~~~dg-i~v~~~~~~~~g~~~~~~g~a~~-~ 86 (181)
T 1i4u_A 10 GKCASVDRNKLWAEQTPNRNSYAGVWYQFALTNNPYQLI-EKCVRNEYSFDGKQ-FVIESTGIAYDGNLLKRNGKLYP-N 86 (181)
T ss_dssp SCCCCCCHHHHHHHHGGGHHHHCEEEEEEEEECCSSCCE-EEEEEEEEEECSSC-EEEEEEEEETTSCEEEEEEEEEE-C
T ss_pred CCCCCCccccCcccccCCHHHcCeEEEEEEEECCCcccC-CeeEEEEEEECCCC-EEEEEEEEecCCCEEEEEEEEEe-C
Confidence 569999999999 9999999999999999999875 48999999998885 899999988 7888888888876 4
Q ss_pred CCCCcceeE----------------------------------------EeecCCCCCHHHHHHHHHHHHhcCCCCCCeE
Q 032185 76 PKSDEAKLK----------------------------------------ILCREPHMDEAIYNQLVEKATSEGYDVSKLH 115 (145)
Q Consensus 76 ~~~~~~kl~----------------------------------------IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~ 115 (145)
+. .+|+|. ||||+|+++++++++++++++++||+.++|+
T Consensus 87 ~~-~~~~~~v~f~~~~~~~y~Vl~tDY~~Ya~~y~C~~~~~~~~~~~~~iLsR~~~~~~~~~~~~~~~~~~~G~d~~~l~ 165 (181)
T 1i4u_A 87 PF-GEPHLSIDYENSFAAPLVILETDYSNYACLYSCIDYNFGYHSDFSFIFSRSANLADQYVKKCEAAFKNINVDTTRFV 165 (181)
T ss_dssp TT-CCSSEEEEETTSCEEEEEEEEECSSSEEEEEEEEECTTSEEEEEEEEEESSSSCCHHHHHHHHHHHHHTTCCGGGEE
T ss_pred CC-CCeEEEEEeCCCCcccEEEEEECCCCeEEEEEEEecCCCccccEEEEEEcCCCCCHHHHHHHHHHHHHcCCCHHHeE
Confidence 43 356653 9999999999999999999999999999999
Q ss_pred EcCCC-CCCCC
Q 032185 116 RTPQS-DNPPE 125 (145)
Q Consensus 116 ~~~q~-~c~~~ 125 (145)
.++|+ .|.+.
T Consensus 166 ~~~q~~~C~~~ 176 (181)
T 1i4u_A 166 KTVQGSSCPYD 176 (181)
T ss_dssp ECCCSTTSCHH
T ss_pred ECCccCCCCCC
Confidence 99996 78653
No 13
>3bx8_A Engineered human lipocalin 2; protein design, ligand binding protein, de novo protein, protein binding; HET: 1PE PE5; 2.00A {Homo sapiens} PDB: 3bx7_A* 3dtq_A 3dsz_A* 1l6m_A* 3tf6_A* 1x71_A* 1x89_A* 1x8u_A* 3fw4_A 3fw5_A 3k3l_A* 3pec_A* 3ped_A* 3tzs_A* 1ngl_A 1dfv_A* 1qqs_A*
Probab=99.94 E-value=1.4e-25 Score=164.78 Aligned_cols=118 Identities=14% Similarity=0.167 Sum_probs=96.6
Q ss_pred CCCCcccCCCCccccceeeEEEeEeCCcCCC---CCCcceEEEEEECCCCcEEEEEeEEeCCeeeEEeeeEEEcCCCCCc
Q 032185 4 KKEMEVVRGLDIKRYMGRWYEIASFPSRNQP---KNGADTRATYTLNEDGTVHVRNETWSDGKRGSIEGTAYKADPKSDE 80 (145)
Q Consensus 4 ~p~v~~~~~Fdl~ry~G~WYeiar~p~~~e~---~~~~c~~a~Y~~~~~g~i~V~n~~~~~G~~~~~~G~a~~~~~~~~~ 80 (145)
.+.++++++||++||+|+|||||++++.++. ++.+|.+++|++.++|.|.|.|++..+|.+..+.+.+... . .+
T Consensus 13 ~~~~~~~~~fd~~ry~G~WY~ia~~~~~~~~~~~~~~~~~~a~y~~~~dg~i~v~~~~~~~g~c~~~~~~~~~~--~-~~ 89 (178)
T 3bx8_A 13 LSKVPLQQNFQDNQFHGKWYVVGLAGNRILRDDQHPMNMYATIYELKEDKSYNVTSVISSHKKCEYTIATFVPG--S-QP 89 (178)
T ss_dssp GGGSCCCTTCCHHHHCEEEEEEEEEETTCCCCTTSCCBCCEEEEEECTTSCEEEEEEEEETTEEEEEEEEEEEC--S-ST
T ss_pred cccccccCCCCcceeeEEeEEEEEEcchhhhcccCCceeEEEEEEECCCCCEEEEEEeecCCcccEEEEEEEEc--C-CC
Confidence 3467889999999999999999999998874 3458999999999999999999998777665554443221 1 11
Q ss_pred cee-------------------------------------------EEeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEc
Q 032185 81 AKL-------------------------------------------KILCREPHMDEAIYNQLVEKATSEGYDVSKLHRT 117 (145)
Q Consensus 81 ~kl-------------------------------------------~IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~ 117 (145)
|+| .||||+|+++++++++++++++++||+.++|+++
T Consensus 90 g~~~v~~~~~~p~~~~~~v~vldtDY~~yaiv~~c~~~~~~~~~~~~llsR~~~l~~~~~~~~~~~~~~~G~~~~~i~~~ 169 (178)
T 3bx8_A 90 GEFTLGNIKSYGDKTSYLVRVVSTDYNQYAVVFFKLAEDNAEFFAITIYGRTKELASELKENFIRFSKSLGLPENHIVFP 169 (178)
T ss_dssp TEEEEC-CCCC----CEEEEEEEECSSSEEEEEEEECC--CCEEEEEEEESSSCCCHHHHHHHHHHHHHTTCCGGGEECC
T ss_pred cEEEEecccccCCCCceEEEEEEcCCCCEEEEEEEEccCCeeEEEEEEECCCCCCCHHHHHHHHHHHHHcCCCHHHEEEC
Confidence 221 1999999999999999999999999999999999
Q ss_pred CCCC-CCC
Q 032185 118 PQSD-NPP 124 (145)
Q Consensus 118 ~q~~-c~~ 124 (145)
+|.+ |.+
T Consensus 170 ~q~~~C~~ 177 (178)
T 3bx8_A 170 VPIDQCID 177 (178)
T ss_dssp BCCCTTTC
T ss_pred CCCCcCCC
Confidence 9987 754
No 14
>2xst_A Lipocalin 15; transport protein, LCN15, MSFL2541; 1.63A {Homo sapiens}
Probab=99.93 E-value=4.1e-26 Score=163.96 Aligned_cols=118 Identities=14% Similarity=0.243 Sum_probs=93.2
Q ss_pred CCCCCCcccCCCCccccceeeEEEeEeCCcC-----CCCCCcceEEEEEECCCCcEEEEEeEEeCCeeeEEeeeEEEcCC
Q 032185 2 ASKKEMEVVRGLDIKRYMGRWYEIASFPSRN-----QPKNGADTRATYTLNEDGTVHVRNETWSDGKRGSIEGTAYKADP 76 (145)
Q Consensus 2 ~~~p~v~~~~~Fdl~ry~G~WYeiar~p~~~-----e~~~~~c~~a~Y~~~~~g~i~V~n~~~~~G~~~~~~G~a~~~~~ 76 (145)
+.||.++++++||++||+|+|||||++++.+ +.. .+|.+++|++.++|.|.|.+.+..+|.+..+.|.+...+
T Consensus 1 ~~C~~~~~~~~fd~~~~~G~WY~ia~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~i~v~~~~~~~~~c~~~~~~~~~~~- 78 (161)
T 2xst_A 1 SMQAEVLLQPDFNAEKFSGLWYVVSMASDCRVFLGKKDH-LSMSTRAIRPTEEGGLHVHMEFPGADGCNQVDAEYLKVG- 78 (161)
T ss_dssp ---CCCCCCTTCCTTTTCEEEEEEEEEECCHHHHHHGGG-CCCEEEEEEECGGGCEEEEEECC-----CEEEEEEEECS-
T ss_pred CCccccCcCCCCCchhcceEEeEEEEEECCchhccccCc-ceeEEEEEEECCCCCEEEEEEeecCCCccEEEEEEEECC-
Confidence 4699999999999999999999999998765 443 589999999999999999998776677766666665532
Q ss_pred CCCcceeE-------------------------------------EeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC
Q 032185 77 KSDEAKLK-------------------------------------ILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQ 119 (145)
Q Consensus 77 ~~~~~kl~-------------------------------------IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q 119 (145)
.+|+|. ||||+|+++++++++++++++++||+.++|++++|
T Consensus 79 --~~g~~~v~~~g~~~~~Vl~tdY~~yaiv~~~~~~~~~~~~~~~llsR~~~~~~~~~~~~~~~~~~~G~~~~~i~~~~q 156 (161)
T 2xst_A 79 --SEGHFRVPALGYLDVRIVDTDYSSFAVLYIYKELEGALSTMVQLYSRTQDVSPQALKSFQDFYPTLGLPKDMMVMLPQ 156 (161)
T ss_dssp --STTEEEEGGGTEEEEEEEEECSSSEEEEEEEEEETTEEEEEEEEEESSSSCCHHHHHHHHHHGGGGTCCGGGEEECCC
T ss_pred --CCcEEEEecCCeEEEEEEEcCCCCEEEEEEEEccCCeEEEEEEEEccCCCCCHHHHHHHHHHHHHcCCCHHHEEECCC
Confidence 134443 99999999999999999999999999999999999
Q ss_pred CC-CC
Q 032185 120 SD-NP 123 (145)
Q Consensus 120 ~~-c~ 123 (145)
.+ |+
T Consensus 157 ~~~C~ 161 (161)
T 2xst_A 157 SDACN 161 (161)
T ss_dssp C----
T ss_pred CCccC
Confidence 97 63
No 15
>2l5p_A Lipocalin 12; beta barrel, transport protein; NMR {Rattus norvegicus}
Probab=99.93 E-value=9.8e-25 Score=161.35 Aligned_cols=125 Identities=9% Similarity=0.147 Sum_probs=100.5
Q ss_pred CCCCcccCCCCccccceeeEEEeEeCCcC---CCCCCcceEEEEEECCCCcEEEEEeEEeCCeeeEEeeeEEEc------
Q 032185 4 KKEMEVVRGLDIKRYMGRWYEIASFPSRN---QPKNGADTRATYTLNEDGTVHVRNETWSDGKRGSIEGTAYKA------ 74 (145)
Q Consensus 4 ~p~v~~~~~Fdl~ry~G~WYeiar~p~~~---e~~~~~c~~a~Y~~~~~g~i~V~n~~~~~G~~~~~~G~a~~~------ 74 (145)
++.+++|+|||++||+|+||+||++++.+ ++++.+|.++.|++.++|.+.|.|.+...|++..+.+.+...
T Consensus 8 ~~~~~~~~nfd~~r~~G~WY~ia~~~~~~~~~e~~~~~~~~~~y~~~~dG~l~v~~~~~~~~~c~~~~~~~~~~~~~gk~ 87 (184)
T 2l5p_A 8 PQGFSQMTSFQSNKFQGEWFVLGLADNTYKREHRPLLHSFITLFKLRDNSEFQVTNSMTRGKHCSTWSYTLIPTNKPGQF 87 (184)
T ss_dssp CSSSCCCSSCCHHHHCEEEEEEEEEETTCCSTTCCSSSCCEEEEEECSSSCEEEEEEEEETTEEEEEEEEEEECSSTTEE
T ss_pred CCCCCcCCCCCchhccEEeeEEEEEeCCccccccCCceeEEEEEEECCCCcEEEEEEeecCCcEEEEEEEEEECCCCCEE
Confidence 45688999999999999999999999887 666568999999999999999999887766666555444322
Q ss_pred -------------------CCCCCc-c-----------e---eEEeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCC
Q 032185 75 -------------------DPKSDE-A-----------K---LKILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQS 120 (145)
Q Consensus 75 -------------------~~~~~~-~-----------k---l~IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q~ 120 (145)
++++++ + . +.||||+|+++++++++++++++++||+.++|++++|.
T Consensus 88 ~v~~~~~~p~~g~~~v~vldtDY~~yaivy~~~~~~g~~~~~~~llsR~~~~~~e~~~~f~~~~~~~G~~~~~ii~~~q~ 167 (184)
T 2l5p_A 88 TRDNRGSGPGADKENIQVIETDYVKFALVLSLRQASNQNITRVSLLGRDWKITHKTIDRFIALTKTQNLTKNNLLFPDLT 167 (184)
T ss_dssp EECCTTCSTTCCCEEEEEEEEETTTEEEEEEEEECSSCEEEEEEEEESSSCCCHHHHHHHHHHHHHTTCCGGGEECCCCS
T ss_pred EEecccccCCCCceEEEEEecCCCCEEEEEEEeccCCeeEEEEEEEcCCCCCCHHHHHHHHHHHHHcCCChHHEEEcCCC
Confidence 111110 0 0 01999999999999999999999999999999999999
Q ss_pred CCCCCcCC
Q 032185 121 DNPPEAEE 128 (145)
Q Consensus 121 ~c~~~~~~ 128 (145)
+.|..++.
T Consensus 168 ~~~~~~~~ 175 (184)
T 2l5p_A 168 DWLLDPKV 175 (184)
T ss_dssp CCCCSSSC
T ss_pred CcCcCcee
Confidence 76666664
No 16
>1bj7_A D 2; allergen, lipocalin; 1.80A {Bos taurus} SCOP: b.60.1.1
Probab=99.93 E-value=3.9e-25 Score=159.21 Aligned_cols=112 Identities=11% Similarity=0.085 Sum_probs=94.5
Q ss_pred cccCCCCccccceeeEEEeEeCCcC----CCCCCcceEEEEEECCCC-cEEEEEeEEeCCeeeEEeeeEEEcCCCCCcce
Q 032185 8 EVVRGLDIKRYMGRWYEIASFPSRN----QPKNGADTRATYTLNEDG-TVHVRNETWSDGKRGSIEGTAYKADPKSDEAK 82 (145)
Q Consensus 8 ~~~~~Fdl~ry~G~WYeiar~p~~~----e~~~~~c~~a~Y~~~~~g-~i~V~n~~~~~G~~~~~~G~a~~~~~~~~~~k 82 (145)
+++++||++||+|+||+||++++.+ ++++.+|.+++|++.++| .|.|.|.+..+|++..+.|.|+++++ |+
T Consensus 2 ~~~~~fd~~~~~G~Wy~ia~a~~~~~~~~e~~~~~~~~~~~~~~~~g~~l~v~~~~~~~g~c~~~~~~a~~~~~----g~ 77 (156)
T 1bj7_A 2 ETPAEIDPSKIPGEWRIIYAAADNKDKIVEGGPLRNYYRRIECINDCESLSITFYLKDQGTCLLLTEVAKRQEG----YV 77 (156)
T ss_dssp -----CCGGGSSEECEEEEEEESSGGGTSTTCTTCCEEEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEEET----TE
T ss_pred CCcccCChhHcCeeeEEEEEEECChhHhccCCCeEEEEEEEEECCCCCEEEEEEEEeeCCEeeEEEEEEEEcCC----Ce
Confidence 5789999999999999999999877 666668999999999999 99999998888999988888876552 33
Q ss_pred eE------------------------------------EeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCCC-CC
Q 032185 83 LK------------------------------------ILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQSD-NP 123 (145)
Q Consensus 83 l~------------------------------------IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q~~-c~ 123 (145)
|. ||||+|+++++++++++++++++||+.++|++++|.+ |.
T Consensus 78 ~~v~~~g~~~~~v~~tdy~~aiv~~~~~~~~~~~~~~~llsR~~~l~~e~~~~f~~~~~~~G~~~~~i~~~~~~~~C~ 155 (156)
T 1bj7_A 78 YVLEFYGTNTLEVIHVSENMLVTYVENYDGERITKMTEGLAKGTSFTPEELEKYQQLNSERGVPNENIENLIKTDNCP 155 (156)
T ss_dssp EEEESSSEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEESSSCCCHHHHHHHHHHHHHHTCCGGGEEECGGGCCSC
T ss_pred EEEEeCCeEEEEEEEcCCCEEEEEEEEcCCCcEEEEEEEEecCCCCCHHHHHHHHHHHHHcCCCHHHEEecCCCCCCC
Confidence 22 9999999999999999999999999999999999875 64
No 17
>1xki_A VON ebner'S gland protein; beta barrel, ligand binding protein, transport protein; 1.80A {Homo sapiens} SCOP: b.60.1.1 PDB: 3eyc_A
Probab=99.93 E-value=2e-25 Score=161.80 Aligned_cols=117 Identities=20% Similarity=0.264 Sum_probs=82.5
Q ss_pred cCCCCccccceeeEEEeEeCCcC--CCCCCcceEEEEEECCCCcEEEEEeEEeCCeeeEEeeeEEEcCCCCCcceeE---
Q 032185 10 VRGLDIKRYMGRWYEIASFPSRN--QPKNGADTRATYTLNEDGTVHVRNETWSDGKRGSIEGTAYKADPKSDEAKLK--- 84 (145)
Q Consensus 10 ~~~Fdl~ry~G~WYeiar~p~~~--e~~~~~c~~a~Y~~~~~g~i~V~n~~~~~G~~~~~~G~a~~~~~~~~~~kl~--- 84 (145)
+++||++||+|+||+||++++.+ +.++.+|++++|++.++|+|.|.|.+..+|.+..+.|.+...+. +|+|.
T Consensus 1 ~~~fd~~r~~G~WY~ia~~~~~~~~e~~~~~~~~~~~~~~~dg~l~v~~~~~~~g~c~~~~~~~~~~~~---~g~~~v~~ 77 (162)
T 1xki_A 1 ASDEEIQDVSGTWYLKAMTVDREFPEMNLESVTPMTLTTLEGGNLEAKVTMLISGRCQEVKAVLEKTDE---PGKYTADG 77 (162)
T ss_dssp -------CCCEEEEEEEEEC-------CCTTCCCEEEEECTTSCEEEEEEC--CCSCCEEEEEEEECSS---TTEEEEGG
T ss_pred CCCCChhHccEEeEEEEEEECCcccccCCeeEEEEEEEECCCCCEEEEEEEEeCCcceEEEEEEEEcCC---CCEEEEeC
Confidence 46999999999999999999988 87666899999999999999999998878888887777765432 23331
Q ss_pred ---------------------------------EeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCCC-CCCCcCCC
Q 032185 85 ---------------------------------ILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQSD-NPPEAEES 129 (145)
Q Consensus 85 ---------------------------------IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q~~-c~~~~~~~ 129 (145)
||||+|+++++++++++++++++||+.++|+.++|.+ |.|...++
T Consensus 78 g~~~~~vldtdY~~yaiv~~~~~~~g~~~~~~~llsR~~~~~~e~~~~f~~~~~~~G~~~~~i~~~~q~~~C~p~~~~~ 156 (162)
T 1xki_A 78 GKHVAYIIRSHVKDHYIFYSEGELHGKPVRGVKLVGRDPKNNLEALEDFEKAAGARGLSTESILIPRQSETCSPGSAWS 156 (162)
T ss_dssp GTEEEEEEECSSTTEEEEEEEEC--CCCEEEEEEEESSSSCCCCCHHHHHHHHHHTTCTTSCEECCSCC----------
T ss_pred CeEEEEEEEcCCCCEEEEEEEcccCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHcCCCHHHEEecCCCCeeCCCCCCC
Confidence 9999999999999999999999999999999998875 87654433
No 18
>1ew3_A Allergen EQU C 1; lipocalin, beta barrel; 2.30A {Equus caballus} SCOP: b.60.1.1
Probab=99.93 E-value=1e-24 Score=157.03 Aligned_cols=114 Identities=15% Similarity=0.200 Sum_probs=98.3
Q ss_pred ccCCCCccccceeeEEEeEeCCcC----CCCCCcceEEEEEECCCCcEEEEEeEEeCCeeeEEeeeEEEcCCCCCcceeE
Q 032185 9 VVRGLDIKRYMGRWYEIASFPSRN----QPKNGADTRATYTLNEDGTVHVRNETWSDGKRGSIEGTAYKADPKSDEAKLK 84 (145)
Q Consensus 9 ~~~~Fdl~ry~G~WYeiar~p~~~----e~~~~~c~~a~Y~~~~~g~i~V~n~~~~~G~~~~~~G~a~~~~~~~~~~kl~ 84 (145)
++++||++||+|+||+||++++.+ +.++.+|.+++|++.++|+|.|.|.+..+|++..+.|.+..++. +|+|.
T Consensus 2 ~~~~fd~~r~~G~Wy~ia~~~~~~~~~~e~~~~~~~~~~~~~~~dg~l~v~~~~~~~g~c~~~~~~~~~~~~---~g~~~ 78 (159)
T 1ew3_A 2 AIRNFDISKISGEWYSIFLASDVKEKIEENGSMRVFVDVIRALDNSSLYAEYQTKVNGECTEFPMVFDKTEE---DGVYS 78 (159)
T ss_dssp CEEECCGGGCCEECEEEEEEESSGGGTSTTCTTCEEEEEEEECTTSCEEEEEEEEETTEEEEEEEEEEECSS---TTEEE
T ss_pred ccccCchhhCceEeEEEEEEEcChhHhhcCCCceEEEEEEEECCCCcEEEEEEEEECCEeeEEEEEEEEcCC---CCEEE
Confidence 578999999999999999999877 45556799999999999999999999888999888888876542 24432
Q ss_pred -------------------------------------EeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCCC-CCCC
Q 032185 85 -------------------------------------ILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQSD-NPPE 125 (145)
Q Consensus 85 -------------------------------------IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q~~-c~~~ 125 (145)
||||+|+++++++++++++++++||+.++|+.++|.+ |.+.
T Consensus 79 v~~~g~~~~~vl~tdY~~yaiv~~~~~~~g~~~~~~~llsR~~~~~~~~~~~f~~~~~~~G~~~~~i~~~~~~~~C~~~ 157 (159)
T 1ew3_A 79 LNYDGYNVFRISEFENDEHIILYLVNFDKDRPFQLFEFYAREPDVSPEIKEEFVKIVQKRGIVKENIIDLTKIDRCFQL 157 (159)
T ss_dssp EESSSEEEEEEEEESSTTEEEEEEEECCSSCCEEEEEEEESSSSCCHHHHHHHHHHHHHTTCCGGGEEEGGGSCCCGGG
T ss_pred EeeCCeEEEEEEEecCCcEEEEEEEEcCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHcCCCHHHEEECCcCCcccCc
Confidence 9999999999999999999999999999999988765 6443
No 19
>1epa_A Epididymal retinoic acid-binding protein; 2.10A {Rattus norvegicus} SCOP: b.60.1.1 PDB: 1epb_A*
Probab=99.92 E-value=4e-25 Score=159.71 Aligned_cols=116 Identities=16% Similarity=0.201 Sum_probs=88.9
Q ss_pred cccCCCCccccceeeEEEeEeCCcC----CCCCCcceEEEEEECCCCcEEEEEeEEeCCeeeEEeeeEEEcCCCC-----
Q 032185 8 EVVRGLDIKRYMGRWYEIASFPSRN----QPKNGADTRATYTLNEDGTVHVRNETWSDGKRGSIEGTAYKADPKS----- 78 (145)
Q Consensus 8 ~~~~~Fdl~ry~G~WYeiar~p~~~----e~~~~~c~~a~Y~~~~~g~i~V~n~~~~~G~~~~~~G~a~~~~~~~----- 78 (145)
+++++||++||+|+|||||++++.+ +.+|.++.+++|+ .++|.|.|.|++...|.+....+.+...+...
T Consensus 1 ~~~~~fd~~r~~G~WY~ia~~~~~~~~~~e~~~~~~~~~~y~-~~~g~i~v~~~~~~~~~c~~~~~~~~~~~~~g~~~~~ 79 (164)
T 1epa_A 1 AVVKDFDISKFLGFWYEIAFASKMGTPGLAHKEEKMGAMVVE-LKENLLALTTTYYSEDHCVLEKVTATEGDGPAKFQVT 79 (164)
T ss_dssp --CCSCCGGGGCEEEEEEEEEEC---------CCCCEEEEEE-EETTEEEEEEEEEETTEEEEEEEEEEECSSTTEEEEE
T ss_pred CCCCCCChhHcCEEeEEEEEEeCCchhhhhccCceeEEEEEE-eCCCcEEEEEEEecCCCeeEEEEEEEEcCCCcEEEEe
Confidence 3689999999999999999999998 7776444899999 89999999999988777766666554432110
Q ss_pred -CcceeE-----------------------------EeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCCC-CCC
Q 032185 79 -DEAKLK-----------------------------ILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQSD-NPP 124 (145)
Q Consensus 79 -~~~kl~-----------------------------IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q~~-c~~ 124 (145)
..+++. ||||+|+++++++++++++++++||+.++|++++|.+ |.+
T Consensus 80 ~~~~~~~v~v~~tdy~~Y~i~~~~~~~~~~~~~~~~llsR~~~l~~~~~~~~~~~~~~~G~~~~~i~~~~q~~~C~~ 156 (164)
T 1epa_A 80 RLSGKKEVVVEATDYLTYAIIDITSLVAGAVHRTMKLYSRSLDDNGEALYNFRKITSDHGFSETDLYILKHDLTCVK 156 (164)
T ss_dssp ETTEEEEEEEEEECSSSEEEEEEEEEETTEEEEEEEEEESCSSCCHHHHHHHHHHHHHTTCCGGGEEECCCCCHHHH
T ss_pred cCCCeEEEEEEecCCCCEEEEEEEeccCCeeeEEEEEEcCCCCCCHHHHHHHHHHHHHcCCCHHHEEECCCCCcccC
Confidence 011111 9999999999999999999999999999999999976 644
No 20
>1lf7_A Complement protein C8gamma; lipocalin, beta barrel, calyx, MAC, immune system; HET: CIT; 1.20A {Homo sapiens} SCOP: b.60.1.1 PDB: 1iw2_A* 2ovd_A* 2ove_A 2ova_A 2rd7_C 3ojy_C* 2qos_C
Probab=99.92 E-value=1e-24 Score=160.94 Aligned_cols=115 Identities=10% Similarity=0.168 Sum_probs=96.7
Q ss_pred CCCcccCCCCccccceeeEEEeEeCCcC---CCCCCcceEEEEEECCCCcEEEEEeEEe-CCeeeEEeeeEEEcCCCCCc
Q 032185 5 KEMEVVRGLDIKRYMGRWYEIASFPSRN---QPKNGADTRATYTLNEDGTVHVRNETWS-DGKRGSIEGTAYKADPKSDE 80 (145)
Q Consensus 5 p~v~~~~~Fdl~ry~G~WYeiar~p~~~---e~~~~~c~~a~Y~~~~~g~i~V~n~~~~-~G~~~~~~G~a~~~~~~~~~ 80 (145)
++++++++||++||+|+||+||++++.+ +. +.+|.++.|++.++|.+.|.|.+.. +|.+..+.|.+...+. +
T Consensus 14 ~~v~~~~~fdl~r~~G~WY~ia~a~~~~~~~e~-~~~~~~a~~~l~~~g~~~v~~~~~~~~g~c~~~~~~~~~~~~---~ 89 (182)
T 1lf7_A 14 STIQPKANFDAQQFAGTWLLVAVGSAGRFLQEQ-GHRAEATTLHVAPQGTAMAVSTFRKLDGICWQVRQLYGDTGV---L 89 (182)
T ss_dssp GGSCCCTTCCHHHHCEEEEEEEEECSCC--------CCCCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEECSS---T
T ss_pred cccCccCCCCchhccEEEEEEEEEecChhHhhc-CCcEEEEEEEEccCCCeEEEEEEEccCCeEEEEEEeEEecCC---C
Confidence 3588999999999999999999998644 44 3589999999999999999999877 8899888888876532 2
Q ss_pred ceeE------------------------------------EeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCCC-CC
Q 032185 81 AKLK------------------------------------ILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQSD-NP 123 (145)
Q Consensus 81 ~kl~------------------------------------IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q~~-c~ 123 (145)
|+|. ||||+|+++++++++++++++++||+.++|+.++|.+ |.
T Consensus 90 g~~~v~~~~~~g~~~v~vldtdY~~yaiv~~~~~~~~~~~llsR~p~l~~e~~~~f~~~~~~~G~~~~~i~~~~q~~~C~ 169 (182)
T 1lf7_A 90 GRFLLQARGARGAVHVVVAETDYQSFAVLYLERAGQLSVKLYARSLPVSDSVLSGFEQRVQEAHLTEDQIFYFPKYGFCE 169 (182)
T ss_dssp TEEEECCSSSSSCEEEEEEEECSSSEEEEEEEETTEEEEEEEESSSSCCHHHHHHHHHHHHHTTCCGGGEEECCSSCCCC
T ss_pred cEEEEeccccCCceEEEEEecCCCcEEEEEEEccCceEEEEEccCCCCCHHHHHHHHHHHHHcCCCHHHEEeCCCCCccc
Confidence 3322 9999999999999999999999999999999999975 64
No 21
>3o22_A Prostaglandin-H2 D-isomerase; lipocalin, prostaglandin synthase; HET: OLA PLM; 1.40A {Homo sapiens} PDB: 3o19_A* 3o2y_A* 2wwp_A 2czt_A 2czu_A 2rq0_A 2e4j_A 2ktd_A*
Probab=99.92 E-value=1.1e-24 Score=157.74 Aligned_cols=118 Identities=12% Similarity=0.229 Sum_probs=92.2
Q ss_pred cccCCCCccccceeeEEEeEeCCc--C-CCC-CCcceEEEEEECCCCcEEEEEeEEeCCeeeEEeeeEEE----------
Q 032185 8 EVVRGLDIKRYMGRWYEIASFPSR--N-QPK-NGADTRATYTLNEDGTVHVRNETWSDGKRGSIEGTAYK---------- 73 (145)
Q Consensus 8 ~~~~~Fdl~ry~G~WYeiar~p~~--~-e~~-~~~c~~a~Y~~~~~g~i~V~n~~~~~G~~~~~~G~a~~---------- 73 (145)
++++|||++||+|+|||||++++. | +.+ +.+|.+++|++.+||.|.|.|++..+|.+..+.+.+..
T Consensus 1 pv~~~fd~~~~~G~WY~ia~a~~~~~~~e~~~~~~~~~~~y~~~~dg~l~v~~~~~~~~~c~~~~~~~~~~~~~g~~~~~ 80 (162)
T 3o22_A 1 SVQPNFQQDKFLGRWFSAGLASNSSWLREKKAALSMAKSVVAPATDGGLNLTSTFLRKNQCETRTMLLQPAGSLGSYSYR 80 (162)
T ss_dssp CCCTTCCHHHHCEEEEEEEEEESCHHHHHHHHTSEEEEEEEEECTTSSEEEEEEEEETTEEEEEEEEEEECSSTTEEEEE
T ss_pred CCCCCCChhhccEeeeEEEEEECCchHhhcCCCceeEEEEEEEcCCCCEEEEEEEEeCCceeEEEEEEEECCCCcEEEEe
Confidence 578999999999999999999886 6 543 24688999999999999999988776665554443332
Q ss_pred ------------cCCCCC------------cc-ee---EEeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCCC-CCC
Q 032185 74 ------------ADPKSD------------EA-KL---KILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQSD-NPP 124 (145)
Q Consensus 74 ------------~~~~~~------------~~-kl---~IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q~~-c~~ 124 (145)
.++++. ++ .+ .||||+|+++++++++++++++++||+.++|++++|.+ |.+
T Consensus 81 ~~~~~~~~~~~vl~tdY~~yaivy~~~~~~~~~~~~~~~llsR~~~~~~~~~~~f~~~~~~~G~~~~~i~~~~q~~~C~~ 160 (162)
T 3o22_A 81 SPHWGSTYSVSVVETDYDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTIVFLPQTDKCMT 160 (162)
T ss_dssp CC---CEEEEEEEEECSSSEEEEEEEEEESGGGGCEEEEEEESSSSCCHHHHHHHHHHHHHTTCCGGGEEECCBCSSSCC
T ss_pred ccccCCcEEEEEEEeCCCcEEEEEEEEecCCCceEEEEEEEcCCCCCCHHHHHHHHHHHHHcCCCHHHEEECCCCCcccC
Confidence 222221 00 01 29999999999999999999999999999999999985 655
Q ss_pred C
Q 032185 125 E 125 (145)
Q Consensus 125 ~ 125 (145)
+
T Consensus 161 ~ 161 (162)
T 3o22_A 161 E 161 (162)
T ss_dssp -
T ss_pred C
Confidence 4
No 22
>2ra6_A Trichosurin; lipocalin, beta barrel, glycoprotein, MILK protein, secreted, transport, transport protein; 1.50A {Trichosurus vulpecula} PDB: 2r73_A 2r74_A
Probab=99.91 E-value=5.9e-24 Score=154.26 Aligned_cols=111 Identities=14% Similarity=0.195 Sum_probs=86.5
Q ss_pred CcccCCCCccccceeeEEEeEeCCcC----CCCCCcceEEEEEECCCCcEEEEEeEEeCCeeeEEeeeEEEcCCCCCcce
Q 032185 7 MEVVRGLDIKRYMGRWYEIASFPSRN----QPKNGADTRATYTLNEDGTVHVRNETWSDGKRGSIEGTAYKADPKSDEAK 82 (145)
Q Consensus 7 v~~~~~Fdl~ry~G~WYeiar~p~~~----e~~~~~c~~a~Y~~~~~g~i~V~n~~~~~G~~~~~~G~a~~~~~~~~~~k 82 (145)
++++++||++||+|+||+||++++.+ ++++.+|..++|++.++ +|.|.+.+..+|++..+.|.+...+. ||+
T Consensus 13 ~~~~~~fd~~~~~G~Wy~ia~~~~~~~~~~e~~~~~~~~~~~~~~~d-~l~v~~~~~~~g~c~~~~~~~~~~~~---~g~ 88 (166)
T 2ra6_A 13 LSDEKERKWEQLSRHWHTVVLASSDRSLIEEEGPFRNFIQNITVESG-NLNGFFLTRKNGQCIPLYLTAFKTEE---ARQ 88 (166)
T ss_dssp -------------CBCEEEEEEESSGGGTSTTCTTCCEEEEEEEETT-EEEEEEEEEETTEEEEEEEEEEECSS---TTE
T ss_pred cccccCCCchhcceEeEEEEEEeCChhHhhcCCCcEEEEEEEEECCC-eEEEEEEEeECCCccEEEEEEEEcCC---CcE
Confidence 78899999999999999999999988 66666899999999988 99999998888999888888876542 244
Q ss_pred eE-------------------------------------EeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCCC
Q 032185 83 LK-------------------------------------ILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQSD 121 (145)
Q Consensus 83 l~-------------------------------------IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q~~ 121 (145)
|. ||||+|+++++++++++++++++||+.++|+.++|.+
T Consensus 89 ~~v~~~g~~~~~v~~tdY~~yaiv~~~~~~~~~~~~~~~llsR~~~~~~e~~~~f~~~~~~~G~~~~~i~~~~q~~ 164 (166)
T 2ra6_A 89 FKLNYYGTNDVYYESSKPNEYAKFIFYNYHDGKVNVVANLFGRTPNLSNEIKKRFEEDFMNRGFRRENILDISEVD 164 (166)
T ss_dssp EEEESSSEEEEEEECSSTTTEEEEEEEEEETTEEEEEEEEEESSSCCCHHHHHHHHHHHHTTTCCGGGEEEGGGSC
T ss_pred EEEecCCceEEEEEEcCCCcEEEEEEEEcCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHHcCCCHHHEEECCCCC
Confidence 32 9999999999999999999999999999999999986
No 23
>2hlv_A Odorant-binding protein; domain swapping, transport protein; HET: LIK; 1.65A {Bos taurus} PDB: 1gt1_A* 1gt3_A* 1gt4_A* 1gt5_A* 1hn2_A* 1obp_A 1g85_A 1pbo_A*
Probab=99.91 E-value=1.3e-23 Score=151.79 Aligned_cols=117 Identities=13% Similarity=0.168 Sum_probs=91.7
Q ss_pred cccCCCCccccceeeEEEeEeCCcC----CCCCCcceEEEEEECCCC-cEEEEEeEEeCCeeeEEeeeEEEcCCCC----
Q 032185 8 EVVRGLDIKRYMGRWYEIASFPSRN----QPKNGADTRATYTLNEDG-TVHVRNETWSDGKRGSIEGTAYKADPKS---- 78 (145)
Q Consensus 8 ~~~~~Fdl~ry~G~WYeiar~p~~~----e~~~~~c~~a~Y~~~~~g-~i~V~n~~~~~G~~~~~~G~a~~~~~~~---- 78 (145)
+++++||++||+|+||+||++++.+ +.++.+|.+++|++.++| .|.|.+.+..+|++..+.|.+...+++.
T Consensus 3 ~~~~~fd~~~~~G~Wy~ia~~~~~~~~~~e~~~~~~~~~~~~~~~~g~~l~v~~~~~~~g~c~~~~~~~~~~~~g~~~v~ 82 (160)
T 2hlv_A 3 EEEAEQNLSELSGPWRTVYIGSTNPEKIQENGPFRTYFRELVFDDEKGTVDFYFSVKRDGKCKNVHVKATKQDDGTYVAD 82 (160)
T ss_dssp --------CTTCBCCEEEEEEESSGGGTSTTCTTCCEEEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEECTTSCEEEE
T ss_pred CCCCCCCchhcceEeeEEEEEeCChHHhccCCCcEEEEEEEEECCCCCEEEEEEEEEECCEeeEEEEEEEEcCCceEEEE
Confidence 5789999999999999999998877 665568999999999999 9999998888899988888887655220
Q ss_pred Ccce-----------------------------eEEeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCCC-CCC
Q 032185 79 DEAK-----------------------------LKILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQSD-NPP 124 (145)
Q Consensus 79 ~~~k-----------------------------l~IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q~~-c~~ 124 (145)
..|. +.||||+|+++++++++++++++++||+.++|++++|.+ |++
T Consensus 83 ~~g~~~~~Vl~tdy~~Yi~~~~~~~~~g~~~~~~~llsR~~~~~~e~~~~f~~~~~~~G~~~~~i~~~~~~~~C~~ 158 (160)
T 2hlv_A 83 YEGQNVFKIVSLSRTHLVAHNINVDKHGQTTELTELFVKGLNVEDEDLEKFWKLTEDKGIDKKNVVNFLENEDCPH 158 (160)
T ss_dssp SSSEEEEEEEEECSSEEEEEEEEECTTSCEEEEEEEEECSSSCCHHHHHHHHHHHHHTTCCGGGEEETTSCCCCCC
T ss_pred eCCeEEEEEEEeCCCEEEEEEEecCCCCceEEEEEEEccCCCCCHHHHHHHHHHHHHcCCCHHHEEECCCCCcCCC
Confidence 0010 119999999999999999999999999999999999875 655
No 24
>1exs_A Beta-lactoglobulin; lipocalin fold, lipid-binding protein; 2.39A {Sus scrofa} SCOP: b.60.1.1
Probab=99.91 E-value=5.6e-24 Score=153.54 Aligned_cols=112 Identities=16% Similarity=0.173 Sum_probs=95.6
Q ss_pred CCcccCCCCccccceeeEEEeEeCCcC-----CCCCCcceEEEEEECCCCcEEEEEeEEeCCeeeEEeeeEEEcCCCCCc
Q 032185 6 EMEVVRGLDIKRYMGRWYEIASFPSRN-----QPKNGADTRATYTLNEDGTVHVRNETWSDGKRGSIEGTAYKADPKSDE 80 (145)
Q Consensus 6 ~v~~~~~Fdl~ry~G~WYeiar~p~~~-----e~~~~~c~~a~Y~~~~~g~i~V~n~~~~~G~~~~~~G~a~~~~~~~~~ 80 (145)
.++++++||++||+|+||+||++++.+ +.++.+|.+++|++.++|+|.|.+.+..+|++..+.|.+...+. |
T Consensus 3 ~~~~~~~fd~~~~~G~Wy~ia~~~~~~~~~e~e~~~~~~~~~~~~~~~dg~l~v~~~~~~~g~c~~~~~~~~~~~~---~ 79 (160)
T 1exs_A 3 VTPIMTELDTQKVAGTWHTVAMAVSDVSLLDAKSSPLKAYVEGLKPTPEGDLEILLQKRENDKCAQEVLLAKKTDI---P 79 (160)
T ss_dssp CCCCCCCCCHHHHSEECEEEEEEEESSCCCCSTTCGGGEEEEEEEECTTSCEEEEEEEEETTEEEEEEEEEEECSS---T
T ss_pred ccCcccCCchhhcceEeEEEEEEECCchhhhccCCCcEEEEEEEEECCCCcEEEEEEeccCCcccEEEEEEEEcCC---C
Confidence 568899999999999999999998765 44445789999999999999999998888999888888877543 3
Q ss_pred ceeE-------------------------------------EeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCCCC
Q 032185 81 AKLK-------------------------------------ILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQSDN 122 (145)
Q Consensus 81 ~kl~-------------------------------------IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q~~c 122 (145)
|+|. ||||+|+++++++++++++++++||+.+ |+ ++|.++
T Consensus 80 g~~~v~~~g~~~~~Vl~tdY~~yaiv~~~~~~~~~~~~~~~llsR~~~~~~e~~~~f~~~~~~~G~~~~-li-~~q~~~ 156 (160)
T 1exs_A 80 AVFKINALDENQLFLLDTDYDSHLLLCMENSASPEHSLVCQSLARTLEVDDQIREKFEDALKTLSVPMR-IL-PAQLEE 156 (160)
T ss_dssp TCEEEEETTEEEEEEEEETTTTEEEEEEECTTCHHHHCEEEEEESSSCCCHHHHHHHHHHHTTSSSCEE-EC-CCCSCC
T ss_pred CEEEEecCCceEEEEEEcCCCcEEEEEEEEcCCCceEEEEEEEecCCCCCHHHHHHHHHHHHhcCCCcc-eE-ecCCCC
Confidence 4443 9999999999999999999999999999 77 666654
No 25
>1beb_A Beta-lactoglobulin; lipocalin, MILK WHEY protein, bovine, retinol-binding; 1.80A {Bos taurus} SCOP: b.60.1.1 PDB: 3nq3_A* 1b0o_A 1bsq_A 1gx8_A* 1gx9_A* 1gxa_A* 2gj5_A* 2r56_A* 3npo_A 1b8e_A* 3nq9_A* 3qzj_A* 3qzk_A* 3ueu_A* 3uev_A* 3uew_A* 3uex_A* 4dq3_A* 4dq4_A* 1qg5_A ...
Probab=99.91 E-value=3e-24 Score=155.12 Aligned_cols=116 Identities=19% Similarity=0.286 Sum_probs=98.7
Q ss_pred CCcccCCCCccccceeeEEEeEeCCc---C--CCCCCcceEEEEEECCCCcEEEEEeEEeCCeeeEEeeeEEEcCCCCCc
Q 032185 6 EMEVVRGLDIKRYMGRWYEIASFPSR---N--QPKNGADTRATYTLNEDGTVHVRNETWSDGKRGSIEGTAYKADPKSDE 80 (145)
Q Consensus 6 ~v~~~~~Fdl~ry~G~WYeiar~p~~---~--e~~~~~c~~a~Y~~~~~g~i~V~n~~~~~G~~~~~~G~a~~~~~~~~~ 80 (145)
.++++++||++||+|+||+||++++. + +.++.+|..++|++.++|+|.|.+.+..+|++..+.|.+...+. |
T Consensus 3 ~~~~~~~fd~~~~~G~Wy~ia~~~~~~~~~~~e~~~~~~~~~~~~~~~dg~l~v~~~~~~~g~c~~~~~~~~~~~~---~ 79 (162)
T 1beb_A 3 VTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVEELKPTPEGDLEILLQKWENGECAQKKIIAEKTKI---P 79 (162)
T ss_dssp --CCCTTCCGGGGCEECEEEEEEESSGGGTSSTTSTTCCEEEEEEECTTSCEEEEEEEECSSSEEEEEEEEEECSS---T
T ss_pred cccccccCCHhHcCceeEEEEEecCChhhHhhcCCCcEEEEEEEEECCCCcEEEEEEEeeCCcceEEEEEEEEcCC---C
Confidence 57899999999999999999999753 4 55456899999999999999999888778889888888876543 3
Q ss_pred ceeE-------------------------------------EeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCCCCC
Q 032185 81 AKLK-------------------------------------ILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQSDNP 123 (145)
Q Consensus 81 ~kl~-------------------------------------IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q~~c~ 123 (145)
|+|. ||||+|+++++++++++++++++||+.+.|+.++|.+|.
T Consensus 80 g~~~v~~~g~~~~~Vl~tDy~~yaiv~~~~~~~~~~~~~~~llsR~~~~~~~~~~~f~~~~~~~g~~~~~li~~~q~~~~ 159 (162)
T 1beb_A 80 AVFKIDALNENKVLVLDTDYKKYLLFCMENSAEPEQSLVCQCLVRTPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQ 159 (162)
T ss_dssp TEEEEEETTEEEEEEEEECSSSEEEEEEECTTCGGGTCEEEEEESSSSCCHHHHHHHHHHHTTSCCCEEEECCHHHHTSC
T ss_pred CEEEEecCCeeEEEEEecCCCcEEEEEEEecCCCceEEEEEEEecCCCCCHHHHHHHHHHHHHCCCCHHHEecccccCCc
Confidence 4443 999999999999999999999999999999999999875
Q ss_pred C
Q 032185 124 P 124 (145)
Q Consensus 124 ~ 124 (145)
.
T Consensus 160 C 160 (162)
T 1beb_A 160 C 160 (162)
T ss_dssp C
T ss_pred c
Confidence 3
No 26
>1dzk_A PIG OBP, odorant-binding protein; lipocalin, transport, olfaction, sensory transduction; HET: PRZ; 1.48A {Sus scrofa} SCOP: b.60.1.1 PDB: 1dzj_A* 1dzm_A* 1dzp_A* 1e00_A* 1e02_A* 1e06_A* 1hqp_A* 1a3y_A
Probab=99.91 E-value=1.4e-23 Score=150.96 Aligned_cols=116 Identities=11% Similarity=0.083 Sum_probs=89.4
Q ss_pred cccCCCCccccceeeEEEeEeCCcC----CCCCCcceEEEEEECCCC-cEEEEEeEEeCCeeeEEeeeEEEcCCC-----
Q 032185 8 EVVRGLDIKRYMGRWYEIASFPSRN----QPKNGADTRATYTLNEDG-TVHVRNETWSDGKRGSIEGTAYKADPK----- 77 (145)
Q Consensus 8 ~~~~~Fdl~ry~G~WYeiar~p~~~----e~~~~~c~~a~Y~~~~~g-~i~V~n~~~~~G~~~~~~G~a~~~~~~----- 77 (145)
+++++||++||+|+||+||++++.+ +.++.+|.+++|++.++| .|.|.+.+..+|.+..+.|.|...+++
T Consensus 2 ~~~~~fd~~~~~G~Wy~ia~~~~~~~~~~e~~~~~~~~~~~~~~~~g~~l~v~~~~~~~g~c~~~~~~a~~~~~g~~~v~ 81 (157)
T 1dzk_A 2 EPQPEQDPFELSGKWITSYIGSSDLEKIGENAPFQVFMRSIEFDDKESKVYLNFFSKENGICEEFSLIGTKQEGNTYDVN 81 (157)
T ss_dssp --------CCCCEECEEEEEEESCGGGTSTTCTTCCEEEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEEGGGEEEEE
T ss_pred CCCCCCCccccceEeEEEEEEECChhHhhcCCCeEEEEEEEEECCCCCEEEEEEEEEECCEeeEEEEEEEEcCCceEEEE
Confidence 4789999999999999999998876 555568999999999999 999999888788888888777654421
Q ss_pred -------------CCc-----------ce----eEEeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCCC-CC
Q 032185 78 -------------SDE-----------AK----LKILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQSD-NP 123 (145)
Q Consensus 78 -------------~~~-----------~k----l~IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q~~-c~ 123 (145)
++. +. +.||||+|+++++++++++++++++||+.++|+.++|.+ |+
T Consensus 82 ~~g~~~~~Vl~tdy~~yi~~~~~~~~~g~~~~~~~llsR~~~~~~e~~~~f~~~~~~~G~~~~~i~~~~~~~~C~ 156 (157)
T 1dzk_A 82 YAGNNKFVVSYASETALIISNINVDEEGDKTIMTGLLGKGTDIEDQDLEKFKEVTRENGIPEENIVNIIERDDCP 156 (157)
T ss_dssp SSSEEEEEEEEECSSEEEEEEEEECTTCCEEEEEEEEESSSCCCHHHHHHHHHHHHHTTCCGGGEEESGGGCCSC
T ss_pred eCCeEEEEEEEeCCCeEEEEEEecCCCCceEEEEEEEecCCCCCHHHHHHHHHHHHHcCCCHHHEEECCcCCcCC
Confidence 100 00 119999999999999999999999999999999998886 53
No 27
>2a2u_A Protein (alpha-2U-globulin); lipid binding protein; 2.50A {Rattus norvegicus} SCOP: b.60.1.1 PDB: 2a2g_A
Probab=99.90 E-value=7.6e-23 Score=149.84 Aligned_cols=116 Identities=11% Similarity=0.190 Sum_probs=96.6
Q ss_pred CCcccCCCCccccceeeEEEeEeCCcCC----CCCCcceEEEEEECCCCcEEEEEeEEeCCeeeEEeeeEEEcCCCCCcc
Q 032185 6 EMEVVRGLDIKRYMGRWYEIASFPSRNQ----PKNGADTRATYTLNEDGTVHVRNETWSDGKRGSIEGTAYKADPKSDEA 81 (145)
Q Consensus 6 ~v~~~~~Fdl~ry~G~WYeiar~p~~~e----~~~~~c~~a~Y~~~~~g~i~V~n~~~~~G~~~~~~G~a~~~~~~~~~~ 81 (145)
.++++++||++||+|+||+||++++.++ .++.+|..++|++.++ ++.|.+.+..+|++..+.|.+...+. ||
T Consensus 22 ~~~~~~~fd~~r~~G~Wy~ia~~~~~~~~~~~~~~~~~~~~~~~~~~d-~l~v~~~~~~~g~c~~~~~~~~~~~~---~g 97 (181)
T 2a2u_A 22 ASSTRGNLDVAKLNGDWFSIVVASNKREKIEENGSMRVFMQHIDVLEN-SLGFKFRIKENGECRELYLVAYKTPE---DG 97 (181)
T ss_dssp BCTTTTCCCGGGGCEECEEEEEECSSGGGTSTTCTTCCEEEEEEEETT-EEEEEEEEESSSCEEEEEEEEEECSS---TT
T ss_pred cCccccCCCcceeeEEeeEEEEEEcChhhhccCCCceEEEEEEEEcCC-cEEEEEEEEECCeeeEEEEEEEEcCC---CC
Confidence 4788999999999999999999998874 4455789999999988 99999988878888888777766432 34
Q ss_pred eeE-------------------------------------EeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCC-CCC
Q 032185 82 KLK-------------------------------------ILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQS-DNP 123 (145)
Q Consensus 82 kl~-------------------------------------IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q~-~c~ 123 (145)
+|. ||||+|+++++++++++++++++||+.++|+.++|. .|.
T Consensus 98 ~~~v~~~g~~~~~Vl~tDy~~yaiv~~~~~~~~~~~~~~~llsR~~~~~~~~~~~f~~~~~~~G~~~~~i~~~~~~~~C~ 177 (181)
T 2a2u_A 98 EYFVEYDGGNTFTILKTDYDRYVMFHLINFKNGETFQLMVLYGRTKDLSSDIKEKFAKLCEAHGITRDNIIDLTKTDRCL 177 (181)
T ss_dssp CEEEESSSEEEEEEEEECSSSEEEEEEEEEETTEEEEEEEEEESSSSCCHHHHHHHHHHHHTTTCCGGGEEEGGGSCCCC
T ss_pred EEEEEecCceEEEEEEecCCcEEEEEEEEcCCCeEEEEEEEEecCCCCCHHHHHHHHHHHHHcCCCHHHEEECCCCCccc
Confidence 432 999999999999999999999999999999986655 575
Q ss_pred CC
Q 032185 124 PE 125 (145)
Q Consensus 124 ~~ 125 (145)
+.
T Consensus 178 ~~ 179 (181)
T 2a2u_A 178 QA 179 (181)
T ss_dssp --
T ss_pred CC
Confidence 43
No 28
>1e5p_A Aphrodisin; lipocalin, pheromone, hamster,; HET: MSE; 1.63A {Mesocricetus auratus} SCOP: b.60.1.1
Probab=99.89 E-value=1.6e-22 Score=144.55 Aligned_cols=107 Identities=11% Similarity=0.110 Sum_probs=91.9
Q ss_pred CCccccceeeEEEeEeCCcC----CCCCCcceEEEEEECCCC-cEEEEEeEEeCCeeeEEeeeEEEcCCCCCcceeE---
Q 032185 13 LDIKRYMGRWYEIASFPSRN----QPKNGADTRATYTLNEDG-TVHVRNETWSDGKRGSIEGTAYKADPKSDEAKLK--- 84 (145)
Q Consensus 13 Fdl~ry~G~WYeiar~p~~~----e~~~~~c~~a~Y~~~~~g-~i~V~n~~~~~G~~~~~~G~a~~~~~~~~~~kl~--- 84 (145)
||++||+|+||+||++++.+ +.++.+|.+++|++.++| .|.|.+.+..+|++..+.|.+..+++ |+|.
T Consensus 1 fd~~k~~G~Wy~ia~a~~~~~~~~e~~~~~~~~~~~~~~~~g~~l~v~~~~~~~g~c~~~~~~~~~~~~----g~~~v~~ 76 (151)
T 1e5p_A 1 QDFAELQGKWYTIVIAADNLEKIEEGGPLRFYFRHIDCYKNCSEMEITFYVITNNQCSKTTVIGYLKGN----GTYETQF 76 (151)
T ss_dssp --CGGGCEECEEEEEEESSGGGTSTTCTTCCEEEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEBTT----SCEEEES
T ss_pred CChhHcceEeEEEEEEECChhHhhcCCCcEEEEEEEEECCCCCEEEEEEEEEECCEEEEEEEEEEEcCC----ceEEEEe
Confidence 89999999999999999876 665568899999999999 99999988888999988888876652 2221
Q ss_pred ----------------------------------EeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCCC-CC
Q 032185 85 ----------------------------------ILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQSD-NP 123 (145)
Q Consensus 85 ----------------------------------IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q~~-c~ 123 (145)
||||+|+++++++++++++++++||+.++|+.++|.+ |+
T Consensus 77 ~g~~~~~Vl~tdy~~yi~~~~~~~~~~~~~~~~~llsR~~~l~~e~~~~f~~~~~~~G~~~~~ii~~~~~~~C~ 150 (151)
T 1e5p_A 77 EGNNIFQPLYITSDKIFFTNKNMDRAGQETNMIVVAGKGNALTPEENEILVQFAHEKKIPVENILNILATDTCP 150 (151)
T ss_dssp SSEEEEEEEEECSSEEEEEEEEECTTSCEEEEEEEEESSSCCCHHHHHHHHHHHHHTTCCGGGEEECGGGCCSC
T ss_pred CCEEEEEEEEeCCCEEEEEEEecCCCCcEEEEEEEEecCCCCCHHHHHHHHHHHHHcCCCHHHEEECCcCCcCC
Confidence 9999999999999999999999999999999998886 53
No 29
>3qkg_A Protein AMBP; beta barrel, binding protein, bound chromophore, human plasm system; 2.30A {Homo sapiens}
Probab=99.88 E-value=3.6e-22 Score=149.02 Aligned_cols=118 Identities=19% Similarity=0.351 Sum_probs=95.4
Q ss_pred CCCcccCCCCccccceeeEEEeEeCC--cCCCCCCcceEEEEEEC---CCCcEEEEEeEEeCCeeeEEeeeEEEcCCCCC
Q 032185 5 KEMEVVRGLDIKRYMGRWYEIASFPS--RNQPKNGADTRATYTLN---EDGTVHVRNETWSDGKRGSIEGTAYKADPKSD 79 (145)
Q Consensus 5 p~v~~~~~Fdl~ry~G~WYeiar~p~--~~e~~~~~c~~a~Y~~~---~~g~i~V~n~~~~~G~~~~~~G~a~~~~~~~~ 79 (145)
.++++++|||+++|+|+||+||..++ .++.....|..+.|++. ++|+|.|.+....+|++..+.+.+...+.
T Consensus 8 ~~v~vq~nFd~~k~~G~WY~ia~As~~~~~~~~~~~~~~~~~~l~~~~~~g~l~v~~~~~~~g~C~~~~~~~~kt~~--- 84 (193)
T 3qkg_A 8 DNIQVQENFNISRIYGKWYNLAIGSTSPWLKKIMDRMTVSTLVLGEGATEAEISMTSTRWRKGVCEETSGAYEKTDT--- 84 (193)
T ss_dssp CCCCCCTTCCGGGGCEEEEEEEEEESCHHHHHHSSSCBCEEEEEEECSSTTEEEEEEEEECSSSEEEEEEEEEECSS---
T ss_pred cccccCCCCChHHhcceeEEEEEecCChhHhhccCCceEEEEEEccCCCCCcEEEEEEEEcCCeeEEEEEEEEecCC---
Confidence 37999999999999999999999987 55432246888888887 58999999887778888777666654322
Q ss_pred cceeE-----------------------------------------EeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcC
Q 032185 80 EAKLK-----------------------------------------ILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTP 118 (145)
Q Consensus 80 ~~kl~-----------------------------------------IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~ 118 (145)
+|+|. ||||+|+++++++++++++++++||+.++|++++
T Consensus 85 pGkf~~~~~~~~~~~~~~Vl~TDY~~yaivy~~~~~~~g~~~~~~~llsR~~~l~~e~~~~f~~~~~~~G~~~~~i~~~~ 164 (193)
T 3qkg_A 85 DGKFLYHKSKWNITMESYVVHTNYDEYAIFLTKKFSRHHGPTITAKLYGRAPQLRETLLQDFRVVAQGVGIPEDSIFTMA 164 (193)
T ss_dssp TTEEEEEETTTTEEEEEEEEEECSSSEEEEEEEECCSSSSCEEEEEEEESSSCCCHHHHHHHHHHHHHTTCCSTTEEECB
T ss_pred CcEEEEecccccccceEEEEecCCccEEEEEEEccccCCceEEEEEEEcCCCCCCHHHHHHHHHHHHHcCCCHHHEEECC
Confidence 23321 9999999999999999999999999999999999
Q ss_pred CCC-CCCC
Q 032185 119 QSD-NPPE 125 (145)
Q Consensus 119 q~~-c~~~ 125 (145)
|.+ |.+.
T Consensus 165 q~~~C~~~ 172 (193)
T 3qkg_A 165 DRGECVPG 172 (193)
T ss_dssp CCCCCCC-
T ss_pred CCCccCCc
Confidence 974 6553
No 30
>3kff_A MUP 4, major urinary protein 4; pheromone, lipocalin, beta barrel, DI bond, pheromone-binding, secreted, transport, transport Pro; 0.96A {Mus musculus} SCOP: b.60.1.1 PDB: 3kfg_A 3kfh_A 3kfi_A 2l9c_A 2lb6_A 1i06_A 1i05_A* 1i04_A 1mup_A 1znd_A 1qy0_A* 1qy2_A* 1qy1_A 1zne_A 1zng_A 1znh_A 1znk_A* 1znl_A* 2dm5_A* 2ozq_A ...
Probab=99.86 E-value=4.8e-21 Score=138.83 Aligned_cols=114 Identities=13% Similarity=0.177 Sum_probs=92.1
Q ss_pred cccCCCCccccceeeEEEeEeCCc---CC-CCCCcceEEEEEECCCCcEEEEEeEEeCCeeeEEeeeEEEcCCCCCccee
Q 032185 8 EVVRGLDIKRYMGRWYEIASFPSR---NQ-PKNGADTRATYTLNEDGTVHVRNETWSDGKRGSIEGTAYKADPKSDEAKL 83 (145)
Q Consensus 8 ~~~~~Fdl~ry~G~WYeiar~p~~---~e-~~~~~c~~a~Y~~~~~g~i~V~n~~~~~G~~~~~~G~a~~~~~~~~~~kl 83 (145)
.+++|||+++|+|+||+||+.++. ++ .+..+|..+.|++.++| |.|.+....+|++..+.+.+...+. ||+|
T Consensus 5 ~v~~nfd~~k~~G~Wy~ia~as~~~~~~e~~~~~~~~~~~~~~~~dg-l~v~~~~~~~g~C~~~~~~~~~t~~---pg~f 80 (162)
T 3kff_A 5 SKGQNLNVEKINGEWFSILLASDKREKIEEHGSMRVFVEHIHVLENS-LAFKFHTVIDGECSEIFLVADKTEK---AGEY 80 (162)
T ss_dssp -----CCGGGGCEECEEEEEEESSGGGGSTTCTTCEEEEEEEECSSE-EEEEEEEEETTEEEEEEEEEEECSS---TTCE
T ss_pred cccCCCChHHcceEeEEEEEEecChhhhhcCCCcEEEEEEEEEcCCC-EEEEEEEecCCEeEEEEEEEEEcCC---CceE
Confidence 468899999999999999999875 33 23357899999999998 9999887779999988888877542 3444
Q ss_pred E-------------------------------------EeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCC-CCCCC
Q 032185 84 K-------------------------------------ILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQS-DNPPE 125 (145)
Q Consensus 84 ~-------------------------------------IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q~-~c~~~ 125 (145)
. ||||+|+++++++++++++++++||+.++|+.++|. .|++.
T Consensus 81 ~~~~~g~~~~~Vl~TdY~~yai~~~~~~~~~~~~~~~~ll~R~~~~~~~~~~~f~~~~~~~G~~~~~i~~~~~~~~C~~~ 160 (162)
T 3kff_A 81 SVMYDGFNTFTILKTDYDNYIMFHLINEKDGKTFQLMELYGRKADLNSDIKEKFVKLCEEHGIIKENIIDLTKTNRCLKA 160 (162)
T ss_dssp EEESSSEEEEEEEEECSSSEEEEEEEEEETTEEEEEEEEEESSSCCCHHHHHHHHHHHHHTTCCGGGEEEGGGSCCCGGG
T ss_pred EEEeCCeEEEEEEEeCCCeEEEEEEEecCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHcCCCHHHEEECCCCCcCccc
Confidence 2 999999999999999999999999999999999986 56543
No 31
>3sao_A Extracellular fatty acid-binding protein; beta-barrel, siderophore binding protein, transport protein; HET: NKN DBH; 1.80A {Gallus gallus} SCOP: b.60.1.1 PDB: 1jzu_A 2kt4_B* 2lbv_A*
Probab=99.84 E-value=1.5e-20 Score=135.97 Aligned_cols=115 Identities=15% Similarity=0.152 Sum_probs=87.8
Q ss_pred CCccccceeeEEEeEeCCcC---CCC-CCcceEEEEEECCCCcEEEEEeEEeCCeeeEEeeeEEEcCCCCCcceeE----
Q 032185 13 LDIKRYMGRWYEIASFPSRN---QPK-NGADTRATYTLNEDGTVHVRNETWSDGKRGSIEGTAYKADPKSDEAKLK---- 84 (145)
Q Consensus 13 Fdl~ry~G~WYeiar~p~~~---e~~-~~~c~~a~Y~~~~~g~i~V~n~~~~~G~~~~~~G~a~~~~~~~~~~kl~---- 84 (145)
.|++||+|+||+||+.++.. +.+ ..+|.+++|++.++|+|.|.+....+|.+..+.+.+...+. ||+|.
T Consensus 3 ~d~~k~~G~Wy~ia~as~~~~~~e~~~~~~~~~~~~~~~~dg~l~v~~~~~~~g~C~~~~~~~~~t~~---pg~f~~~~~ 79 (160)
T 3sao_A 3 PDRSEVAGKWYIVALASNTDFFLAEKGKMKMVMARISFLGEDELEVSYAAPSPKGCRKWETTFKKTSD---DGEVYYSEE 79 (160)
T ss_dssp ---CTTCEEEEEEEEECCCHHHHHHGGGCCCEEEEEEEETTTEEEEEEEECCTTCCEEEEEEEEC--------CEEEETT
T ss_pred CCchhcCeEeEEEEEEECCchhhccCCCceeEEEEEEECCCCCEEEEEEecCCCCCceEEEEEEecCC---CcEEEEecC
Confidence 58999999999999998763 222 24899999999999999999888777777776666554321 23332
Q ss_pred ---------------------------------EeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCC-CCCCCcCCCC
Q 032185 85 ---------------------------------ILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQS-DNPPEAEESP 130 (145)
Q Consensus 85 ---------------------------------IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q~-~c~~~~~~~~ 130 (145)
||||+|+++++++++++++++++||+.++|++++|. .|.+.--++|
T Consensus 80 g~~~~~vl~tdY~~yaiv~~~~~~~~~~~~~~~llsR~~~~~~e~~~~f~~~~~~~G~~~~~i~~~~~~~~C~~~e~~~~ 159 (160)
T 3sao_A 80 AEKTVEVLDTDYKSYAVIFATRVKDGRTLHMMRLYSRSREVSPTAMAIFRKLARERNYTDEMVAVLPSQAACSVDEVLVP 159 (160)
T ss_dssp TTEEEEEEEECSSSEEEEEEEEEETTEEEEEEEEEESSSSCCHHHHHHHHHHHHTTTCCGGGEEECCCCSSCCCCCCCCC
T ss_pred CcEEEEEEEcCCCcEEEEEEEeccCCceEEEEEEEecCCCCCHHHHHHHHHHHHHcCCCHHHEEECCCCCccCCcceecC
Confidence 999999999999999999999999999999999887 5655433444
No 32
>3l4r_A Allergen DOG 2, minor allergen CAN F 2; lipocalin allergen, disulfide bond, secreted, TRAN lipid binding protein; 1.45A {Canis familiaris}
Probab=99.80 E-value=4.3e-19 Score=129.82 Aligned_cols=115 Identities=14% Similarity=0.147 Sum_probs=89.1
Q ss_pred CcccCCCCccccceeeEEEeEeCCc--C--CCCCCcceEEEEEECCCCcEEEEEeEEeCCeeeEEeeeEEEcCCCCCcce
Q 032185 7 MEVVRGLDIKRYMGRWYEIASFPSR--N--QPKNGADTRATYTLNEDGTVHVRNETWSDGKRGSIEGTAYKADPKSDEAK 82 (145)
Q Consensus 7 v~~~~~Fdl~ry~G~WYeiar~p~~--~--e~~~~~c~~a~Y~~~~~g~i~V~n~~~~~G~~~~~~G~a~~~~~~~~~~k 82 (145)
..+++|||+++|+|+||+||..++. + +.+..+|....|+ .++|.+.|.+....+|++..+.+.+...+. ||+
T Consensus 4 ~~~~~nfd~~k~~G~Wy~ia~As~~~~~~~~~~~~~~~~~~i~-~~~g~l~v~~~~~~~g~C~~~~~~~~kt~~---pG~ 79 (170)
T 3l4r_A 4 NHEEPQGGLEELSGRWHSVALASNKSDLIKPWGHFRVFIHSMS-AKDGNLHGDILIPQDGQCEKVSLTAFKTAT---SNK 79 (170)
T ss_dssp ---CCCTTGGGGCEECEEEEEEESSGGGTSTTCTTCCEEEEEE-EETTEEEEEEEEECSSSEEEEEEEEEECSS---TTE
T ss_pred CccCCCCChhHcEEEeEEEEEEECChhHhhcCCCceEEEEEEE-ecCCcEEEEEEEeeCCccceeEEEEEecCC---CcE
Confidence 4678999999999999999998763 3 3333479999999 789999998776667877777666655422 343
Q ss_pred eE-------------------------------------EeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCCC-CCC
Q 032185 83 LK-------------------------------------ILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQSD-NPP 124 (145)
Q Consensus 83 l~-------------------------------------IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q~~-c~~ 124 (145)
|. ||||+|++++++++++.++++++||+.++|+.++|.+ |.+
T Consensus 80 f~~~~~G~~~~~Vl~TDY~~yaiv~~~~~~~~~~~~~~~ll~R~~~~~~e~~~~f~~~~~~~Gl~~~~i~~~~~~~~C~~ 159 (170)
T 3l4r_A 80 FDLEYWGHNDLYLAEVDPKSYLILYMINQYNDDTSLVAHLMVRDLSRQQDFLPAFESVCEDIGLHKDQIVVLSDDDRCQG 159 (170)
T ss_dssp EEEESSSEEEEEEEEEETTTEEEEEEEEEETTEEEEEEEEEESCGGGTTTTHHHHHHHHHHTTCCGGGEEECCTTTCC--
T ss_pred EEEEecCcEEEEEEEecCCcEEEEEEEeccCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHHcCCCHHHEEECCCCCccCC
Confidence 32 9999999999999999999999999999999888875 655
Q ss_pred C
Q 032185 125 E 125 (145)
Q Consensus 125 ~ 125 (145)
.
T Consensus 160 ~ 160 (170)
T 3l4r_A 160 S 160 (170)
T ss_dssp -
T ss_pred h
Confidence 4
No 33
>3kq0_A Alpha-1-acid glycoprotein 1; plasma protein, polymorphism, acute phase protein, secreted, pyrrolidone carboxylic acid, lipocalin; 1.80A {Homo sapiens} PDB: 3apu_A* 3apv_A* 3apw_A* 3apx_A*
Probab=99.73 E-value=1.2e-18 Score=129.31 Aligned_cols=129 Identities=14% Similarity=0.139 Sum_probs=87.5
Q ss_pred CCCC--cccCCCCccccceeeEEEeEeCCc--CC--CCCCcceEEEEEECCCC-cEEEEEeEEe-CCeeeEEeeeEEEcC
Q 032185 4 KKEM--EVVRGLDIKRYMGRWYEIASFPSR--NQ--PKNGADTRATYTLNEDG-TVHVRNETWS-DGKRGSIEGTAYKAD 75 (145)
Q Consensus 4 ~p~v--~~~~~Fdl~ry~G~WYeiar~p~~--~e--~~~~~c~~a~Y~~~~~g-~i~V~n~~~~-~G~~~~~~G~a~~~~ 75 (145)
|+++ .|+.|||++||+|+||+||...+. +. .+..+.+++.|++..+| .+.++ .... +|++....+.+...+
T Consensus 5 c~~l~~~Pv~nfdl~k~~G~Wy~Ia~As~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~g~C~~~~~~~~~t~ 83 (192)
T 3kq0_A 5 CANLVPVPITNATLDQITGKWFYIASAFRNEEYNKSVQEIQATFFYFTPNKTEDTIFLR-EYQTRQDQCIYNTTYLNVQR 83 (192)
T ss_dssp CGGGCCCCCCHHHHHHHCEEEEEEEEEESSHHHHHHHTTEEEEEEEEEEETTTTEEEEE-EEEEETTEEEEEEEEEEEET
T ss_pred cCCCcCCCCccCChhHhCEEeEEEEEEECCHhHhhhcCceeEEEEEEEECCCCCEEEEE-EEEccCCcEEEEEEEEEEcc
Confidence 4443 478899999999999999977543 11 11245667888887654 45554 4444 888877666665433
Q ss_pred CCCCcceeE------------------------------------EeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC
Q 032185 76 PKSDEAKLK------------------------------------ILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQ 119 (145)
Q Consensus 76 ~~~~~~kl~------------------------------------IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q 119 (145)
. +|+|. ||+|+|+++++++++++++++.+||+.++|++++|
T Consensus 84 ~---~g~~~~~~~g~~~~~~~v~~~d~~~~~~~~~~~~~~~~~l~LysRtp~v~~e~le~F~~~a~~~G~~~~~ii~~~~ 160 (192)
T 3kq0_A 84 E---NGTISRYVGGQEHFAHLLILRDTKTYMLAFDVNDEKNWGLSVYADKPETTKEQLGEFYEALDCLRIPKSDVVYTDW 160 (192)
T ss_dssp T---TTEEEEEETTEEEEEEEEECSSTTEEEEEECSSCGGGCEEEEEESSSCCCTTTTHHHHHHHHHHTCCGGGCEECCG
T ss_pred c---CCEEEEEcCCceEEEEEEEcCCCcEEEEEEecCCCceEEEEEEeCCCCCCHHHHHHHHHHHHHCCCCHHHEEEccC
Confidence 2 23332 99999999999999999999999999999999987
Q ss_pred C--CCCCC---cCCCCCCCCce
Q 032185 120 S--DNPPE---AEESPQDTKGI 136 (145)
Q Consensus 120 ~--~c~~~---~~~~~~~~~~~ 136 (145)
. .|.+. ++..++...|-
T Consensus 161 ~~d~C~~~~~~~~~~~~~eeg~ 182 (192)
T 3kq0_A 161 KKDKCEPLEKQHEKERKQEEGE 182 (192)
T ss_dssp GGCCCHHHHHHHHHC-------
T ss_pred CCCcCcccccccccccCCccCC
Confidence 4 57553 22344444443
No 34
>3fiq_A OBP1, RCG36470, odorant-binding protein 1F; lipocalin, oderant-binding protein, transport protein; 1.60A {Rattus norvegicus} SCOP: b.60.1.0
Probab=99.65 E-value=2.7e-15 Score=108.27 Aligned_cols=116 Identities=9% Similarity=0.026 Sum_probs=84.3
Q ss_pred ccCCCCccccceeeEEEeEeCCc--C-CC-CCCcceEEEEEEC-CCCcEEEEEeEEeCCeeeEEeeeEEEc---------
Q 032185 9 VVRGLDIKRYMGRWYEIASFPSR--N-QP-KNGADTRATYTLN-EDGTVHVRNETWSDGKRGSIEGTAYKA--------- 74 (145)
Q Consensus 9 ~~~~Fdl~ry~G~WYeiar~p~~--~-e~-~~~~c~~a~Y~~~-~~g~i~V~n~~~~~G~~~~~~G~a~~~--------- 74 (145)
.++|||+++|+|+||.||...+. + +. +..+.....+++. ++|.+.|+.....+|++......+...
T Consensus 3 ~~~~fd~~k~~G~Wy~ia~As~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~g~C~~~~~~~~kt~pG~f~~~~ 82 (157)
T 3fiq_A 3 ENLDISPSEVNGDWRTLYIVADNVEKVAEGGSLRAYFQHMECGDECQELKIIFNVKLDSECQTHTVVGQKHEDGRYTTDY 82 (157)
T ss_dssp -CCCCCHHHHCEECEEEEEEESSGGGTSTTCTTCCEEEEEEECGGGCEEEEEEEEEETTEEEEEEEEEEECTTSCEEEES
T ss_pred cccCCChHHcceEeEEEEEEeCChhHhhcCCCcEEEEEEEEEccCCCeEEEEEEEeeCCeeEEEEEEEEecCCCEEEEee
Confidence 46899999999999999987653 2 22 2246777788887 789999886555577766554444332
Q ss_pred ---------CCCCCc-----------ce----eEEeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCCCCCC
Q 032185 75 ---------DPKSDE-----------AK----LKILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQSDNPP 124 (145)
Q Consensus 75 ---------~~~~~~-----------~k----l~IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q~~c~~ 124 (145)
+++++- ++ ++||+|+|.+++++++++.++++.+||..++|+.+++.+-|+
T Consensus 83 ~G~~~~~V~~tdy~~~i~~~~~~~~~g~~~~~~~LygR~~~~s~e~~e~F~~~~~~~Gl~~enI~~~~~~~~C~ 156 (157)
T 3fiq_A 83 SGRNYFHVLKKTDDIIFFHNVNVDESGKETNVILVAGKREDLNKAQKQELRKLAEEYNIPNENTQHLVPTDTCN 156 (157)
T ss_dssp SSEEEEEEEEECSSEEEEEEEEECTTSCEEEEEEEEESSSCCCHHHHHHHHHHHHHTTCCGGGCEECGGGCCSC
T ss_pred cCeEEEEEEEecCCEEEEEEEEEcCCCcEEEEEEEEcCCCCCCHHHHHHHHHHHHHcCCCHHHEEeCCCCCCCC
Confidence 222110 10 019999999999999999999999999999999988886443
No 35
>1pm1_X Nitrophorin 2, NP2, prolixin-S; beta barrel, lipocalin, imidazole, ferric heme, blood clotting inhibitor; HET: HEM; 1.10A {Rhodnius prolixus} SCOP: b.60.1.1 PDB: 2all_X* 2amm_X* 2hys_A* 1euo_A* 1pee_A* 1t68_X* 2acp_X* 2ah7_X* 2al0_X* 2gtf_X* 2a3f_X* 2eu7_X* 2asn_X*
Probab=99.64 E-value=1.3e-15 Score=112.56 Aligned_cols=119 Identities=19% Similarity=0.233 Sum_probs=84.6
Q ss_pred CCC-CCcccCCCCcccc-ceeeEEEeEeCCcCCCCCCcceEEEEEECCCCcEEEEEeEEe-CCe-eeEE--------ee-
Q 032185 3 SKK-EMEVVRGLDIKRY-MGRWYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRNETWS-DGK-RGSI--------EG- 69 (145)
Q Consensus 3 ~~p-~v~~~~~Fdl~ry-~G~WYeiar~p~~~e~~~~~c~~a~Y~~~~~g~i~V~n~~~~-~G~-~~~~--------~G- 69 (145)
.|| .+++|+|||++|| .|+|||+++.+..++.....|..++|+.+ +|.+.|.+.++. .|. .... .|
T Consensus 2 ~C~~~~~~m~nFd~~kff~G~WY~th~~~~~~~~~~~vC~~~~~~~~-~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~g~ 80 (180)
T 1pm1_X 2 DCSTNISPKQGLDKAKYFSGKWYVTHFLDKDPQVTDQYCSSFTPRES-DGTVKEALYHYNANKKTSFYNIGEGKLESSGL 80 (180)
T ss_dssp CCCSCCCCCSSCCHHHHSSSCEEEEEEECCCTTCCCCEEEEEEEEEE-TTEEEEEEEEEETTTTEEEEEEEEEEECSSSS
T ss_pred cCCCCCccccCCChHHcCCceEEEEEEecCCCccCcceeEEEEEEec-CCcEEEEEEEEecCCCeEEEEEecCCCCCCCC
Confidence 599 9999999999999 59999999988776532358999999984 567877776654 221 1100 11
Q ss_pred -------------------------eEEEcCCCCCccee----------------EEeecCCCCCHHHHHHHHHHHHhcC
Q 032185 70 -------------------------TAYKADPKSDEAKL----------------KILCREPHMDEAIYNQLVEKATSEG 108 (145)
Q Consensus 70 -------------------------~a~~~~~~~~~~kl----------------~IlsR~p~l~~~~~~~~~~~~~~~G 108 (145)
...+.+++ ++.-+ .||+|++.. ++.+++..+++++|
T Consensus 81 k~~~~c~~~~~~~~~~~~~~~~~~~~~~Vl~TD-~nYAlvY~C~~~~~~~~~dn~~IL~R~~~~--~~~~~~~~~l~~~~ 157 (180)
T 1pm1_X 81 QYTAKYKTVDKKKAVLKEADEKNSYTLTVLEAD-DSSALVHICVREGSKDLGDVYTVLTHQKDA--EPSAKVKSAVTQAG 157 (180)
T ss_dssp EEEEEEEEECTTCCEEECCCTTEEEEEEEEEEC-SSEEEEEEEEEETTEEEEEEEEEEESSTTC--CCCHHHHHHHHHTT
T ss_pred EEEEEEEeecCCCCccccccccccEEEEEEEeC-CCeEEEEEEeccCCCceeeeEEEEecCCCC--CccHHHHHHHHHcC
Confidence 12222333 22111 199999983 34678888899999
Q ss_pred CCCCCeEEcCCCCCCCC
Q 032185 109 YDVSKLHRTPQSDNPPE 125 (145)
Q Consensus 109 ~d~~~l~~~~q~~c~~~ 125 (145)
++.++|+.++|..|+..
T Consensus 158 l~~~~f~~~~~~~C~~~ 174 (180)
T 1pm1_X 158 LQLSQFVGTKDLGCQYD 174 (180)
T ss_dssp CCGGGSEEGGGSCCCCC
T ss_pred CCHHHceeccCCCCCCc
Confidence 99999999999999654
No 36
>3ebk_A Allergen BLA G 4; beta barrel, cockroach, glycoprotein, secreted; 1.90A {Blattella germanica}
Probab=99.60 E-value=9.6e-16 Score=113.14 Aligned_cols=74 Identities=16% Similarity=0.195 Sum_probs=59.3
Q ss_pred CCC-CCcccCCCCccccceeeEEEeEeCCcCCCCCCcceEEEEEECCCCcEEEEEeEEeCCeeeEEeeeEEEcCCCCCcc
Q 032185 3 SKK-EMEVVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRNETWSDGKRGSIEGTAYKADPKSDEA 81 (145)
Q Consensus 3 ~~p-~v~~~~~Fdl~ry~G~WYeiar~p~~~e~~~~~c~~a~Y~~~~~g~i~V~n~~~~~G~~~~~~G~a~~~~~~~~~~ 81 (145)
.|| .+++|++||++||+|+||||||+|+.|+. ..|++++|+++++ +.+.|.+..+|.+..+.|.|++++ |
T Consensus 9 ~C~~~~~vv~nFDl~RYlGkWYEIAr~pn~fe~--~~c~tA~Ytl~gd--~vv~n~~~~~G~~~~~~G~A~~~~-----g 79 (176)
T 3ebk_A 9 DCFRHESLVPNLDYERFRGSWIIAAGTSEALTQ--YKCWIDRFSYDDA--LVSKYTDSQGKNRTTIRGRTKFEG-----N 79 (176)
T ss_dssp TTCCSCCSCTTCCHHHHCEEEEEEEESCSGGGG--SEEEEEEEETTTE--EEEEEECTTSCSCEEEEEEEEEET-----T
T ss_pred CCCCCCCccCCcChHHcCeeeEEEEEecCCccc--ceEEEEEEEecCC--EEEEEEEecCCcEEEEEEEEEecC-----C
Confidence 474 68899999999999999999999999994 4899999999544 444455444888899999988864 5
Q ss_pred eeEE
Q 032185 82 KLKI 85 (145)
Q Consensus 82 kl~I 85 (145)
+|.+
T Consensus 80 KL~V 83 (176)
T 3ebk_A 80 KFTI 83 (176)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6653
No 37
>1x8p_A Nitrophorin 4, NP4; lipocalin, beta barrel, ferric heme, ligand binding protein; HET: HEM; 0.85A {Rhodnius prolixus} SCOP: b.60.1.1 PDB: 1d3s_A* 1eqd_A* 1erx_A* 1ike_A* 1ikj_A* 1d2u_A* 1ml7_A* 1np4_A* 1u0x_A* 1x8n_A* 1koi_A* 1x8o_A* 1x8q_A* 1ywa_A* 1ywb_A* 1ywc_A* 1ywd_A* 2at4_X* 2at5_X* 2at6_X* ...
Probab=99.57 E-value=1.6e-14 Score=107.10 Aligned_cols=119 Identities=11% Similarity=0.139 Sum_probs=84.1
Q ss_pred CCC-CCcccCCCCcccc-cee-eEEEeEeCCcC-CCCCCcceEEEEEECCCCcEEEEEeEEe-CCeee--EE-------e
Q 032185 3 SKK-EMEVVRGLDIKRY-MGR-WYEIASFPSRN-QPKNGADTRATYTLNEDGTVHVRNETWS-DGKRG--SI-------E 68 (145)
Q Consensus 3 ~~p-~v~~~~~Fdl~ry-~G~-WYeiar~p~~~-e~~~~~c~~a~Y~~~~~g~i~V~n~~~~-~G~~~--~~-------~ 68 (145)
.|| .+++|+|||++|| .|+ ||++++.+..+ +.....|..++|+..++| +.|.+.++. .|... .+ .
T Consensus 1 ~C~~~~~~m~nFd~~kff~G~~WY~th~~~~~~~~~~~~vC~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~c~~~~~~ 79 (184)
T 1x8p_A 1 ACTKNAIAQTGFNKDKYFNGDVWYVTDYLDLEPDDVPKRYCAALAAGTASGK-LKEALYHYDPKTQDTFYDVSELQVESL 79 (184)
T ss_dssp CCCCCCCCCTTCCHHHHTEEEEEEEEEEEESSGGGSCSSCEEEEEEEEETTE-EEEEEEEECTTTCCEEEEEEEEEEEET
T ss_pred CCCCCCCcccCCCHHHhcCCCEEEEEEEEcCCCccccCceeEEEEEEEcCCC-EEEEEEEEecCCCeEEEEEEeCCCCCC
Confidence 489 9999999999998 599 99999998763 312258999999987654 777776654 22210 00 0
Q ss_pred e-------------------------eEEEcCCCCCcce----------------eEEeecCCCCCHHHHHHHHHHHHhc
Q 032185 69 G-------------------------TAYKADPKSDEAK----------------LKILCREPHMDEAIYNQLVEKATSE 107 (145)
Q Consensus 69 G-------------------------~a~~~~~~~~~~k----------------l~IlsR~p~l~~~~~~~~~~~~~~~ 107 (145)
| ...+.+++ ++.- +.||+|++.... .+++..+|+++
T Consensus 80 gk~~~~c~~~~~~~~~~~~~~~~~~~~~~Vl~TD-~nYAlvY~C~~~~~~~~~dn~~VL~R~~~~~~--~~~~~~~l~~~ 156 (184)
T 1x8p_A 80 GKYTANFKKVDKNGNVKVAVTAGNYYTFTVMYAD-DSSALIHTCLHKGNKDLGDLYAVLNRNKDAAA--GDKVKSAVSAA 156 (184)
T ss_dssp TEEEEEEEEECTTCCEEECCCTTEEEEEEEEEEC-SSEEEEEEEEEETTCCCCEEEEEEESSTTCCC--CHHHHHHHHHT
T ss_pred ceEEEEEEEecCCCCccccccceeEEEEEEEEeC-CCeEEEEEEecCCCCceeeeEEEEecCCCCcc--hHHHHHHHHHc
Confidence 1 12222232 2111 129999998662 67888899999
Q ss_pred CCCCCCeEEcCCCCCCCC
Q 032185 108 GYDVSKLHRTPQSDNPPE 125 (145)
Q Consensus 108 G~d~~~l~~~~q~~c~~~ 125 (145)
|++.++|+.++|.+|+..
T Consensus 157 gld~~~f~~~~~~~C~~~ 174 (184)
T 1x8p_A 157 TLEFSKFISTKENNCAYD 174 (184)
T ss_dssp TCCGGGSEECGGGCCCCC
T ss_pred CCCHHHcEEcccCCCCCC
Confidence 999999999999999654
No 38
>4ge1_A Biogenic amine-binding protein; lipocalin binding protein, serotonin, norepinephrine, saliva amine-binding protein; HET: TSS; 2.15A {Rhodnius prolixus} PDB: 4get_A* 4hfo_A
Probab=99.56 E-value=4.7e-14 Score=105.79 Aligned_cols=124 Identities=12% Similarity=0.184 Sum_probs=89.0
Q ss_pred CCCCCCcccCCCCcccc-ceeeEEEeEeCCcC---CCCCCcceEEEEEECCCCcEEEEEeEEe-C---------------
Q 032185 2 ASKKEMEVVRGLDIKRY-MGRWYEIASFPSRN---QPKNGADTRATYTLNEDGTVHVRNETWS-D--------------- 61 (145)
Q Consensus 2 ~~~p~v~~~~~Fdl~ry-~G~WYeiar~p~~~---e~~~~~c~~a~Y~~~~~g~i~V~n~~~~-~--------------- 61 (145)
+.|+.+++|+|||.++| .|+||++...+..+ ... ..|....++.+++|.+.+.+..+. .
T Consensus 3 ~~C~~~~~m~nFd~~kfF~G~WYvTh~k~~~~~~~~~~-~vCr~y~~~~~~~g~~~~~~~~y~~~~~~~~~~v~C~~~~~ 81 (197)
T 4ge1_A 3 SGCSTVDTVKDFNKDNFFTGSWYITHYKLGDSTLEVGD-KNCTKFLHQKTADGKIKEVFSNYNPNAKTYSYDISFAKVSD 81 (197)
T ss_dssp CCCCCCCCCSSCCHHHHSSSEEEEEEEEESSSCCCGGG-CCEEEEEEEECTTSEEEEEEEEEETTTTEEEEEEEEEEGGG
T ss_pred ccCCCCccccCCCHHHccCCeEEEEEEecCccccccCC-CcceEEEEEEcCCCcEEEEeeEecCCCceEEEEEEeccccc
Confidence 56999999999999999 89999999776552 111 369888888877886654443332 1
Q ss_pred -----Ceee--EE------------eeeEEEcCCCCCccee--------------EEeecCCCCCHHHHHHHHHHHHhcC
Q 032185 62 -----GKRG--SI------------EGTAYKADPKSDEAKL--------------KILCREPHMDEAIYNQLVEKATSEG 108 (145)
Q Consensus 62 -----G~~~--~~------------~G~a~~~~~~~~~~kl--------------~IlsR~p~l~~~~~~~~~~~~~~~G 108 (145)
|++. .. ....++.+++|++.-+ .||+|++.+++++.+++..+++.+|
T Consensus 82 ~~~~~Gqfsf~C~~~~~~g~~~~~~~~~~~Vl~TDY~nYAlvY~C~~~~~~~~~~~vL~R~~~~~~~~~~~~~~~l~~~g 161 (197)
T 4ge1_A 82 FDGNNGKYTAKNVIVEKDGRKIDERTLQVSYIDTDYSKYSVVHVCDPAAPDYYLYAVQSRTENVKEDVKSKVEAALGKVG 161 (197)
T ss_dssp BCTTSSEEEEEEEEECTTCCEEEEEEEEEEEEEECSSSEEEEEEEETTEEEEEEEEEEESSSSCCGGGHHHHHHHHHHTT
T ss_pred CCCCCceEEEEEEecCCCCcccceeeEEEEEEEecCCcEEEEEEEEccCCcceEEEEEECCCCCchhhHHHHHHHHHHcC
Confidence 1110 00 1112344444432111 1999999999999999999999999
Q ss_pred CCCCCeEEcCCCC--CCCCc
Q 032185 109 YDVSKLHRTPQSD--NPPEA 126 (145)
Q Consensus 109 ~d~~~l~~~~q~~--c~~~~ 126 (145)
++.++|+.++|.+ |....
T Consensus 162 l~~~~f~~~~q~~~~C~~~~ 181 (197)
T 4ge1_A 162 LKLSGLFDATTLGNKCQYDD 181 (197)
T ss_dssp CCGGGSEEGGGTGGGCCCCH
T ss_pred CCHHHeEECCCCCCCCCCcH
Confidence 9999999999999 97764
No 39
>3cqn_A Violaxanthin DE-epoxidase, chloroplast; lipocalin, enzyme, xanthophyll cycle, non photochemical quenching, NPQ, antheraxanthin, zeaxanthin; 2.00A {Arabidopsis thaliana} PDB: 3cqr_A
Probab=99.49 E-value=8.4e-13 Score=97.61 Aligned_cols=119 Identities=20% Similarity=0.300 Sum_probs=77.6
Q ss_pred CCCcccCCCCccccceeeEEEeEeCCcCCCCCCcceEEEEEECCCC----cEEEEEeEEeCCeeeEEeee-EEEcCCCCC
Q 032185 5 KEMEVVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDG----TVHVRNETWSDGKRGSIEGT-AYKADPKSD 79 (145)
Q Consensus 5 p~v~~~~~Fdl~ry~G~WYeiar~p~~~e~~~~~c~~a~Y~~~~~g----~i~V~n~~~~~G~~~~~~G~-a~~~~~~~~ 79 (145)
+...++++||+++|.|+||.+|.+...|.. ..|..-.|....++ .|.++...- +|.+...... -...+++ .
T Consensus 10 ~~~~~~~dFd~~~fsGkWYi~ag~n~~~d~--~dcq~~~F~~~k~~~~~G~L~~r~~~p-~g~c~~~~~~~~~~qkt~-~ 85 (185)
T 3cqn_A 10 DPSVLVQNFNISDFNGKWYITSGLNPTFDA--FDCQLHEFHTEGDNKLVGNISWRIKTL-DSGFFTRSAVQKFVQDPN-Q 85 (185)
T ss_dssp CGGGSCSCCCGGGGCEEEEEEEESCTTTTC--CSCCEEEEEEETTTEEEEEEEEEEECT-TSCEEEEEEEEEEEECSS-C
T ss_pred CccccCCCCChhhcceEEEEEeeccCCcce--ecCCccccccCCCCccceeEEEEEECC-CCCeEEeeeEeeeeecCC-C
Confidence 344678999999999999999998777754 57887777655433 333221111 3443332220 0111222 1
Q ss_pred cceeE----------------------------------------------EeecCCCCCHHHHHHHHHHHHhcCCCCCC
Q 032185 80 EAKLK----------------------------------------------ILCREPHMDEAIYNQLVEKATSEGYDVSK 113 (145)
Q Consensus 80 ~~kl~----------------------------------------------IlsR~p~l~~~~~~~~~~~~~~~G~d~~~ 113 (145)
||+|. ||+|+|++++++++++++++++.|++.++
T Consensus 86 PG~~~n~~~~~l~~~~dwyV~~t~~~~~~~dy~~VYy~G~~~~~~~y~ga~LY~Rsp~l~peale~f~~fa~~~Gl~~e~ 165 (185)
T 3cqn_A 86 PGVLYNHDNEYLHYQDDWYILSSKIENKPEDYIFVYYRGRNDAWDGYGGAVVYTRSSVLPNSIIPELEKAAKSIGRDFST 165 (185)
T ss_dssp TTEEEECC--------EEEEEEEECSSSTTCEEEEEEEEEEETTEEEEEEEEEESSSSCCGGGHHHHHHHHHHTTCCGGG
T ss_pred CceEEcccccccCCcccEEEEeecccCCCCCEEEEEEEeecCCCceeeeEEEEeCCCCCCHHHHHHHHHHHHHcCCCHHH
Confidence 22221 99999999999999999999999999999
Q ss_pred eEEcCCCCCCCCcCC
Q 032185 114 LHRTPQSDNPPEAEE 128 (145)
Q Consensus 114 l~~~~q~~c~~~~~~ 128 (145)
|+.++.+ |.+.+-+
T Consensus 166 ~~~~dn~-c~~~~~~ 179 (185)
T 3cqn_A 166 FIRTDNT-CGPEPRS 179 (185)
T ss_dssp SEECCCC-CC-----
T ss_pred EEEecCC-CCCCCcc
Confidence 9998865 5455443
No 40
>3bx6_A Alpha-1-acid glycoprotein; plasma protein, acute phase protein, polymorphism, pyrrolidone carboxylic acid, signaling protei; 1.80A {Homo sapiens} PDB: 3kq0_A 3apu_A* 3apv_A* 3apw_A* 3apx_A*
Probab=99.40 E-value=1.1e-13 Score=103.34 Aligned_cols=138 Identities=12% Similarity=0.130 Sum_probs=83.7
Q ss_pred CCCCC--cccCCCCccccceeeEEEeEeCCc--CCCCCCcceEEEEEEC---CCCcEEEEEeEEeCCeeeEEeeeEEEcC
Q 032185 3 SKKEM--EVVRGLDIKRYMGRWYEIASFPSR--NQPKNGADTRATYTLN---EDGTVHVRNETWSDGKRGSIEGTAYKAD 75 (145)
Q Consensus 3 ~~p~v--~~~~~Fdl~ry~G~WYeiar~p~~--~e~~~~~c~~a~Y~~~---~~g~i~V~n~~~~~G~~~~~~G~a~~~~ 75 (145)
.|+++ .|+.+||+++|+|+||-||...+. +.........+.|.+. .+|+|.++.....+|++....+.+.+..
T Consensus 4 ~C~~l~~~P~~n~~~~q~~GKWy~Ia~As~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~t~t~~~~G~C~~~s~~v~~t~ 83 (192)
T 3bx6_A 4 LCANLVPVPITNATLDQITGKWFYIASAFRNEEYNKSVQEIQATFFYFTPNKTEDTIFLREYQTRQDQCIYNTTYLNVQR 83 (192)
T ss_dssp CCGGGCCCCCCHHHHHHHCEEEEEEEEEESSHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEET
T ss_pred cchhhcccCCCCCChhheeeeEEEEEEEeCCHHHHHhhCceeEEEEEEecCCCCCEEEEEEEEEECCEEEEEEEEEEEec
Confidence 46654 468899999999999999987632 2111123455555555 5678888766666777766554333222
Q ss_pred CCCCccee------------------------------------EEeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEc-C
Q 032185 76 PKSDEAKL------------------------------------KILCREPHMDEAIYNQLVEKATSEGYDVSKLHRT-P 118 (145)
Q Consensus 76 ~~~~~~kl------------------------------------~IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~-~ 118 (145)
. +|++ .||+|+|+++++++++++++++.+||..+.|+.+ +
T Consensus 84 ~---~g~~s~~~g~~~~~~~vl~t~d~~~~~~~~~~~~~~~~~~~LygR~~e~~~e~le~F~~~~~~~Gl~~e~Ii~~d~ 160 (192)
T 3bx6_A 84 E---NGTISRYVGGQEHFAHLLILRDTKTYMLAFDVNDEKNWGLSVYADKPETTKEQLGEFYEALDCLRIPKSDVVYTDW 160 (192)
T ss_dssp T---TTEEEEEETTEEEEEEEEECSSTTEEEEEECSSCGGGCEEEEEESSSCCCTTTTHHHHHHHHHHTCCGGGCEECCG
T ss_pred C---CCeEEEeCCCcEEEEEEEEeCCCcEEEEEeecCCceeEEEEEEcCCCCCCHHHHHHHHHHHHHcCCCHHHEEEcCC
Confidence 1 1221 1999999999999999999999999999999988 3
Q ss_pred CC-CCCCC----cCCCCCCCCceeEEeecc
Q 032185 119 QS-DNPPE----AEESPQDTKGIWWIKSIF 143 (145)
Q Consensus 119 q~-~c~~~----~~~~~~~~~~~~~~~~~~ 143 (145)
+. .|.|. .++-.+..++.-|-.--|
T Consensus 161 ~~d~C~~~e~~~~~~~~~~~~~~~~~~~~~ 190 (192)
T 3bx6_A 161 KKDKCEPLEKQHEKERKQEEGESAWSHPQF 190 (192)
T ss_dssp GGCCCHHHHHHC------------------
T ss_pred CCCcCCCcccccchhhhhhcccccccCccc
Confidence 55 57552 123334444555544433
No 41
>1avg_I Triabin; bovine thrombin, thrombin inhibitor, complex (blood coagulation/inhibitor); 2.60A {Triatoma pallidipennis} SCOP: b.60.1.3
Probab=99.24 E-value=2.8e-12 Score=90.99 Aligned_cols=52 Identities=12% Similarity=0.064 Sum_probs=43.3
Q ss_pred CCCCCCcccCCCCcccc-ceeeEEEeEeCCcCCCCCCcceEEEEEECCCCcEEEEE
Q 032185 2 ASKKEMEVVRGLDIKRY-MGRWYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRN 56 (145)
Q Consensus 2 ~~~p~v~~~~~Fdl~ry-~G~WYeiar~p~~~e~~~~~c~~a~Y~~~~~g~i~V~n 56 (145)
+.||++++|+|||++|| +|+||++++.+... . ..|....|++.++|.+.|.+
T Consensus 4 ~~C~~~~~~~nFd~~kff~G~WY~~~~~~~~~--~-~~C~~~~~~~~~~g~~~v~~ 56 (142)
T 1avg_I 4 DDCSIEKAMGDFKPEEFFNGTWYLAHGPGVTS--P-AVCQKFTTSGSKGFTQIVEI 56 (142)
T ss_dssp CCGGGCCCCSSCCHHHHSSSEEEEESSSSCCC--S-EEEEEEECSSSCCCEEEEEE
T ss_pred CCCCCCCcccCCCHHHccCceEEEEEEECCCC--C-CEeEEEEEEEcCCCEEEEEe
Confidence 57999999999999996 69999999987543 2 47999999887888776654
No 42
>2yg2_A Apolipoprotein M; lipid transport, lipocalin, HDL; HET: S1P FLC; 1.70A {Homo sapiens} PDB: 2wex_A* 2wew_A* 2xkl_A
Probab=97.93 E-value=0.0003 Score=50.96 Aligned_cols=111 Identities=16% Similarity=0.185 Sum_probs=61.6
Q ss_pred CcccCCCCccc----cceeeEEEeEeC-CcCCCC---CCcceEEEEEECC-CCcEEEEEeEEe-CCeeeEEeeeEEEcC-
Q 032185 7 MEVVRGLDIKR----YMGRWYEIASFP-SRNQPK---NGADTRATYTLNE-DGTVHVRNETWS-DGKRGSIEGTAYKAD- 75 (145)
Q Consensus 7 v~~~~~Fdl~r----y~G~WYeiar~p-~~~e~~---~~~c~~a~Y~~~~-~g~i~V~n~~~~-~G~~~~~~G~a~~~~- 75 (145)
.-+-..+|-+. |+|+||-||-.. ..-+.. -.+....+.+... +..+.++-.-.. +|.+..-.-.+....
T Consensus 12 ~l~t~~~~~~e~p~~~lGkW~FvAGa~~~~~~L~~f~~vDs~~~~i~~~s~~~~l~lr~~~r~k~g~C~~~~w~Y~l~~~ 91 (172)
T 2yg2_A 12 QLTTLGVDGKEFPEVHLGQWYFIAGAAPTKEELATFDPVDNIVFNMAAGSAPMQLHLRATIRMKDGLCVPRKWIYHLTEG 91 (172)
T ss_dssp CCCBCCSCC-CHHHHTCEEEEEEEEEESSGGGGGGGTTEEEEEEEEEECSSTTEEEEEEEEEETTSCEEEEEEEEEECTT
T ss_pred cccccccCCccCccceeeEEEEEEeccCChhHhhhhccccceEEEeecCCCCceEEEEeeeeccCCccccceeEEEecCC
Confidence 34455666666 999999999653 221111 1344555555554 334555422222 354432221222211
Q ss_pred ------------------CCCC-----------cceeEEeecCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC
Q 032185 76 ------------------PKSD-----------EAKLKILCREPHMDEAIYNQLVEKATSEGYDVSKLHRTPQ 119 (145)
Q Consensus 76 ------------------~~~~-----------~~kl~IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q 119 (145)
..+. -.+|.||+|++.++++.++++++.+.=++| ..|..+|+
T Consensus 92 tt~l~~eg~~d~~~~l~~~~Cp~cIilketg~~~~r~lLysRs~~~~~e~veeFk~q~sCl~f--~~~l~~p~ 162 (172)
T 2yg2_A 92 STDLRTEGRPDMKTELFSSSCPGGIMLNETGQGYQRFLLYNRSPHPPEKCVEEFKSLTSCLDS--KAFLLTPR 162 (172)
T ss_dssp SSCEEETTEEEEEEEEECCSSTTEEEEEEEETTEEEEEEEESSSSCCHHHHHHHHHHHHHTTC--CEEEECCC
T ss_pred cceeEecCCcchhhccccCCCCCeEEEeecCcCceeEEEEecCCCCCHHHHHHHHHhhhhcCC--HHHHhChh
Confidence 1110 113449999999999999999999998777 34444443
No 43
>2l8n_A Transcriptional repressor CYTR; bacterial gene repressor, helix turn helix binding domain, L family, transcription regulation, binding protein; NMR {Escherichia coli} PDB: 2lcv_A
Probab=70.85 E-value=2.4 Score=25.44 Aligned_cols=30 Identities=20% Similarity=0.260 Sum_probs=23.5
Q ss_pred EeecCCCCCHHHHHHHHHHHHhcCCCCCCe
Q 032185 85 ILCREPHMDEAIYNQLVEKATSEGYDVSKL 114 (145)
Q Consensus 85 IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l 114 (145)
+|.-.+.++++..+++.+.++++||.++.+
T Consensus 29 ~ln~~~~vs~~t~~rV~~~a~~lgY~pn~~ 58 (67)
T 2l8n_A 29 ALMNPDKVSQATRNRVEKAAREVGYLPQPM 58 (67)
T ss_dssp TTTCCCCSCHHHHHHHHHHHHHHCCCC---
T ss_pred HHcCCCCCCHHHHHHHHHHHHHhCCCccHH
Confidence 555566799999999999999999987654
No 44
>1uxc_A FRUR (1-57), fructose repressor; DNA-binding protein, LACI family, transc regulation; NMR {Escherichia coli} SCOP: a.35.1.5 PDB: 1uxd_A
Probab=65.71 E-value=2.6 Score=25.07 Aligned_cols=31 Identities=3% Similarity=0.225 Sum_probs=23.4
Q ss_pred EeecCC---CCCHHHHHHHHHHHHhcCCCCCCeE
Q 032185 85 ILCREP---HMDEAIYNQLVEKATSEGYDVSKLH 115 (145)
Q Consensus 85 IlsR~p---~l~~~~~~~~~~~~~~~G~d~~~l~ 115 (145)
+|.-.+ .++++..+++.+.++++||.++.+.
T Consensus 20 vLng~~~~~~vs~et~~rI~~aa~~lgY~pn~~a 53 (65)
T 1uxc_A 20 VINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVA 53 (65)
T ss_dssp HHHTCTTTTTCTTHHHHHHHHHHHHHTCCCC---
T ss_pred HHcCCCCCCCCCHHHHHHHHHHHHHhCCCccHHH
Confidence 344445 7999999999999999999877543
No 45
>3kzt_A Uncharacterized protein; protein of unknown function, structural genomics, joint CENT structural genomics, JCSG; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=55.23 E-value=15 Score=25.52 Aligned_cols=44 Identities=18% Similarity=0.366 Sum_probs=28.9
Q ss_pred CCCCccccceeeEEEeEeCCcCCCCCCcceEEEEEE-CCCCcEEEE
Q 032185 11 RGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTL-NEDGTVHVR 55 (145)
Q Consensus 11 ~~Fdl~ry~G~WYeiar~p~~~e~~~~~c~~a~Y~~-~~~g~i~V~ 55 (145)
..+.+...-|.||+|..+.. .+..-.+|+...+.+ +.+|...|.
T Consensus 93 kTLKVr~L~g~wY~Vsf~~~-~~k~y~~~v~IpLr~~~k~Gk~~I~ 137 (143)
T 3kzt_A 93 KTLSVKHLNDNWYEVNYTSA-KGSQYERAVSIPVRVVNVDGQYLID 137 (143)
T ss_dssp GGCEEEEEETTEEEEEEEET-TTSTTCEEEEEEEEEEEETTEEEEE
T ss_pred heeeEEEeCCCEEEEEEEec-cCCccceeeeeEEEEeccCCCEEEe
Confidence 34555667799999998876 333213678787777 456666554
No 46
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=39.09 E-value=11 Score=27.77 Aligned_cols=24 Identities=17% Similarity=0.425 Sum_probs=20.3
Q ss_pred CCccccceeeEEEeEeCCcCCCCC
Q 032185 13 LDIKRYMGRWYEIASFPSRNQPKN 36 (145)
Q Consensus 13 Fdl~ry~G~WYeiar~p~~~e~~~ 36 (145)
+.|..|.|+|-.+.-+|..|...|
T Consensus 49 vsLsd~~GK~vVL~FyP~d~TpvC 72 (219)
T 3tue_A 49 ISLSSYKGKWVVLFFYPLDFTFVC 72 (219)
T ss_dssp EEGGGGTTSEEEEEECSCTTCSSC
T ss_pred EehHHhCCCEEEEEEecccCCCCC
Confidence 567899999999999999887655
No 47
>2k9i_A Plasmid PRN1, complete sequence; plasmid COPY control protein, ribbon helix helix protein, DNA binding protein; NMR {Sulfolobus islandicus} PDB: 3ft7_A
Probab=36.97 E-value=5.2 Score=22.24 Aligned_cols=25 Identities=16% Similarity=0.234 Sum_probs=20.4
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCeE
Q 032185 91 HMDEAIYNQLVEKATSEGYDVSKLH 115 (145)
Q Consensus 91 ~l~~~~~~~~~~~~~~~G~d~~~l~ 115 (145)
.|+++.++++...+++.|++.+.++
T Consensus 15 rl~~el~~~l~~~a~~~g~s~s~~i 39 (55)
T 2k9i_A 15 YIPQEWHDRLMEIAKEKNLTLSDVC 39 (55)
T ss_dssp EECHHHHHHHHHHHHHHTCCHHHHH
T ss_pred EcCHHHHHHHHHHHHHhCCCHHHHH
Confidence 4789999999999999998766543
No 48
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=36.76 E-value=22 Score=26.66 Aligned_cols=29 Identities=14% Similarity=0.353 Sum_probs=24.7
Q ss_pred EeecCCCCCHHHHHHHHHHHHhcCCCCCC
Q 032185 85 ILCREPHMDEAIYNQLVEKATSEGYDVSK 113 (145)
Q Consensus 85 IlsR~p~l~~~~~~~~~~~~~~~G~d~~~ 113 (145)
+|...+.++++..+++++.++++||-++.
T Consensus 22 vln~~~~vs~~tr~rV~~aa~~lgY~pn~ 50 (332)
T 2hsg_A 22 VVNGNPNVKPSTRKKVLETIERLGYRPNA 50 (332)
T ss_dssp HHTTCTTSCHHHHHHHHHHHHHHTCCSCH
T ss_pred HHcCCCCCCHHHHHHHHHHHHHHCCCcCH
Confidence 45556789999999999999999997753
No 49
>3h87_C Putative uncharacterized protein; toxin antitoxin complex, vapbc complex, RHH motif, structura genomics; 1.49A {Mycobacterium tuberculosis}
Probab=36.61 E-value=32 Score=21.08 Aligned_cols=25 Identities=12% Similarity=0.182 Sum_probs=21.6
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCe
Q 032185 90 PHMDEAIYNQLVEKATSEGYDVSKL 114 (145)
Q Consensus 90 p~l~~~~~~~~~~~~~~~G~d~~~l 114 (145)
++++++++..+...+++.|.+.+.+
T Consensus 7 Rnvpdev~~~L~~rAa~~G~S~~~y 31 (73)
T 3h87_C 7 RDIPDDVLASLDAIAARLGLSRTEY 31 (73)
T ss_dssp CCCCHHHHHHHHHHHHHHTCCHHHH
T ss_pred cCCCHHHHHHHHHHHHHcCCCHHHH
Confidence 5799999999999999999986543
No 50
>2cpg_A REPA protein, transcriptional repressor COPG; DNA-binding protein, plasmid, gene regulation; 1.60A {Streptococcus agalactiae} SCOP: a.43.1.3 PDB: 1b01_A* 1ea4_A*
Probab=36.55 E-value=4 Score=21.83 Aligned_cols=24 Identities=21% Similarity=0.344 Sum_probs=19.8
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCe
Q 032185 91 HMDEAIYNQLVEKATSEGYDVSKL 114 (145)
Q Consensus 91 ~l~~~~~~~~~~~~~~~G~d~~~l 114 (145)
.++++.++++.+.+++.|++.+.+
T Consensus 8 ~l~~~l~~~Ld~~a~~~g~srS~~ 31 (45)
T 2cpg_A 8 TLSESVLENLEKMAREMGLSKSAM 31 (45)
T ss_dssp EEEHHHHHHHHHHHHHHTCCHHHH
T ss_pred ecCHHHHHHHHHHHHHHCcCHHHH
Confidence 478899999999999999876554
No 51
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=35.95 E-value=23 Score=26.68 Aligned_cols=29 Identities=14% Similarity=0.165 Sum_probs=24.7
Q ss_pred EeecCCCCCHHHHHHHHHHHHhcCCCCCC
Q 032185 85 ILCREPHMDEAIYNQLVEKATSEGYDVSK 113 (145)
Q Consensus 85 IlsR~p~l~~~~~~~~~~~~~~~G~d~~~ 113 (145)
+|...+.++++..+++++.++++||-++.
T Consensus 20 vLn~~~~vs~~tr~rV~~~a~~lgY~pn~ 48 (340)
T 1qpz_A 20 VINKTRFVAEETRNAVWAAIKELHYSPSA 48 (340)
T ss_dssp HHHTCSCCCHHHHHHHHHHHHHHTCCCCH
T ss_pred HHcCcCCCCHHHHHHHHHHHHHhCCCCCH
Confidence 45566789999999999999999997753
No 52
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=35.67 E-value=25 Score=26.46 Aligned_cols=30 Identities=20% Similarity=0.336 Sum_probs=26.3
Q ss_pred EeecCCCCCHHHHHHHHHHHHhcCCCCCCe
Q 032185 85 ILCREPHMDEAIYNQLVEKATSEGYDVSKL 114 (145)
Q Consensus 85 IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l 114 (145)
+|...+.++++..+++++.++++||-++..
T Consensus 30 ~Ln~~~~vs~~tr~rV~~~~~~lgY~pn~~ 59 (344)
T 3kjx_A 30 VLRNRGDVSDATRARVLAAAKELGYVPNKI 59 (344)
T ss_dssp HHTTCSCCCHHHHHHHHHHHHHHTCCCCCC
T ss_pred HHcCCCCCCHHHHHHHHHHHHHhCCCCCHH
Confidence 677778999999999999999999987653
No 53
>4fxe_A Antitoxin RELB; toxin/antitoxin system, toxin, nuclease, translational contr response, RELB, ribosome, toxin-toxin inhibitor compl; 2.75A {Escherichia coli} PDB: 2k29_A 2kc8_B
Probab=33.90 E-value=18 Score=22.43 Aligned_cols=22 Identities=14% Similarity=0.185 Sum_probs=18.0
Q ss_pred CCHHHHHHHHHHHHhcCCCCCC
Q 032185 92 MDEAIYNQLVEKATSEGYDVSK 113 (145)
Q Consensus 92 l~~~~~~~~~~~~~~~G~d~~~ 113 (145)
+++++.+++.++++++|++++.
T Consensus 8 iD~~lK~~a~~v~~~lGl~~s~ 29 (79)
T 4fxe_A 8 IDDELKARSYAALEKMGVTPSE 29 (79)
T ss_dssp CCHHHHHHHHHHHHHHTCCHHH
T ss_pred cCHHHHHHHHHHHHHhCCCHHH
Confidence 6788888888888888888754
No 54
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=31.88 E-value=14 Score=27.20 Aligned_cols=24 Identities=17% Similarity=0.335 Sum_probs=19.7
Q ss_pred CCCccccceeeEEEeEeCCcCCCC
Q 032185 12 GLDIKRYMGRWYEIASFPSRNQPK 35 (145)
Q Consensus 12 ~Fdl~ry~G~WYeiar~p~~~e~~ 35 (145)
.+.|+.|.|+|-.+.-+|..|...
T Consensus 44 ~vsLsd~~GK~vVL~FyP~d~Tpv 67 (216)
T 3sbc_A 44 EVSLDKYKGKYVVLAFIPLAFTFV 67 (216)
T ss_dssp EECGGGGTTSEEEEEECSCTTSSH
T ss_pred EEehHHhCCCeEEEEEEcCCCCCc
Confidence 356889999999999999888654
No 55
>3lhn_A Lipoprotein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lipid binding protein; HET: MSE GOL; 1.42A {Shewanella oneidensis}
Probab=31.70 E-value=1.2e+02 Score=20.32 Aligned_cols=40 Identities=15% Similarity=0.117 Sum_probs=26.7
Q ss_pred CCcce--EEEEEECCCCcEEEEEeEEe-CCeeeEEeeeEEEcC
Q 032185 36 NGADT--RATYTLNEDGTVHVRNETWS-DGKRGSIEGTAYKAD 75 (145)
Q Consensus 36 ~~~c~--~a~Y~~~~~g~i~V~n~~~~-~G~~~~~~G~a~~~~ 75 (145)
|.+|. ....+|++||++.+...... ........|+.....
T Consensus 39 CADC~GI~ttLtL~~Dgty~l~~~Yl~~~~~~~~~~G~~~w~~ 81 (126)
T 3lhn_A 39 CASCEGIQTTLTLQADNSFELKSIYLGKDESIFKVAGKFDWDS 81 (126)
T ss_dssp CTTSSEEEEEEEECTTSEEEEEEEEESTTCEEEEEEEEEEECT
T ss_pred CCCCCCeEEEEEECCCCCEEEEEEECCCCCCCeEeeeEEEEeC
Confidence 77885 45667789999988766664 444555567655543
No 56
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=29.39 E-value=22 Score=27.08 Aligned_cols=30 Identities=13% Similarity=0.305 Sum_probs=23.0
Q ss_pred EeecCCCCCHHHHHHHHHHHHhcCCC-CCCe
Q 032185 85 ILCREPHMDEAIYNQLVEKATSEGYD-VSKL 114 (145)
Q Consensus 85 IlsR~p~l~~~~~~~~~~~~~~~G~d-~~~l 114 (145)
+|...+.++++..+++++.++++||- ++..
T Consensus 29 vLn~~~~Vs~~tr~rV~~~a~~lgY~~pn~~ 59 (366)
T 3h5t_A 29 AYNRPEQLSAELRQRILDTAEDMGYLGPDPV 59 (366)
T ss_dssp HHHCGGGSCHHHHHHHHHHHHHTTC------
T ss_pred HHCCCCCCCHHHHHHHHHHHHHhCCCCCCHH
Confidence 56677889999999999999999997 6543
No 57
>3fyr_A Sporulation inhibitor SDA; helical hairpin, histidine kinase inhibitor, sporulation regulation, alternative initiation; 1.97A {Bacillus subtilis} SCOP: a.2.12.1 PDB: 1pv0_A 3d36_C*
Probab=25.31 E-value=31 Score=19.39 Aligned_cols=26 Identities=12% Similarity=0.069 Sum_probs=18.9
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCCCCe
Q 032185 89 EPHMDEAIYNQLVEKATSEGYDVSKL 114 (145)
Q Consensus 89 ~p~l~~~~~~~~~~~~~~~G~d~~~l 114 (145)
-..+|++.+-+....|.+++++++.|
T Consensus 3 M~~LSDe~LiesY~~A~el~L~~dFI 28 (48)
T 3fyr_A 3 MRKLSDELLIESYFKATEMNLNRDFI 28 (48)
T ss_dssp CTTSCHHHHHHHHHHHHHTTCCHHHH
T ss_pred hhhhcHHHHHHHHHHHHHhCCCHHHH
Confidence 35678888888888888888776543
No 58
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=24.96 E-value=15 Score=27.59 Aligned_cols=30 Identities=13% Similarity=0.299 Sum_probs=0.0
Q ss_pred EeecCCCCCHHHHHHHHHHHHhcCCCCCCe
Q 032185 85 ILCREPHMDEAIYNQLVEKATSEGYDVSKL 114 (145)
Q Consensus 85 IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l 114 (145)
+|...+.++++..+++++.++++||-++..
T Consensus 23 vln~~~~vs~~tr~rV~~~a~~lgY~pn~~ 52 (338)
T 3dbi_A 23 VLSGNGYVSQETKDRVFQAVEESGYRPNLL 52 (338)
T ss_dssp ------------------------------
T ss_pred HHCCCCCCCHHHHHHHHHHHHHHCCCcCHH
Confidence 677778999999999999999999987654
No 59
>2bsq_E FITA, trafficking protein A; transcription, transcription regulation complex, PIN domain, ribbon-helix-helix, DNA binding; HET: 5IU; 3.0A {Neisseria gonorrhoeae} SCOP: a.43.1.8 PDB: 2h1o_E*
Probab=22.82 E-value=87 Score=19.12 Aligned_cols=23 Identities=22% Similarity=0.278 Sum_probs=18.1
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCC
Q 032185 90 PHMDEAIYNQLVEKATSEGYDVS 112 (145)
Q Consensus 90 p~l~~~~~~~~~~~~~~~G~d~~ 112 (145)
+++++++.+.++..+.+.|.+.+
T Consensus 6 Rnlpd~~~~~Lk~rAa~~GrSle 28 (77)
T 2bsq_E 6 RNLSEATHNAIKFRARAAGRSTE 28 (77)
T ss_dssp CSCCHHHHHHHHHHHHHTTCCHH
T ss_pred cCCCHHHHHHHHHHHHHhCCCHH
Confidence 35888888888888888887654
No 60
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=21.89 E-value=19 Score=27.01 Aligned_cols=30 Identities=10% Similarity=0.243 Sum_probs=0.0
Q ss_pred EeecCCCCCHHHHHHHHHHHHhcCCCCCCe
Q 032185 85 ILCREPHMDEAIYNQLVEKATSEGYDVSKL 114 (145)
Q Consensus 85 IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l 114 (145)
+|...+.++++..+++++.++++||-++..
T Consensus 25 vln~~~~vs~~tr~rV~~~a~~lgY~pn~~ 54 (332)
T 2o20_A 25 VVNGNANVKEKTRQKVLEAIAELDYRPNAV 54 (332)
T ss_dssp ------------------------------
T ss_pred HHcCCCCCCHHHHHHHHHHHHHHCCCcCHH
Confidence 677677899999999999999999977643
No 61
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=21.76 E-value=19 Score=27.32 Aligned_cols=30 Identities=7% Similarity=0.206 Sum_probs=0.0
Q ss_pred EeecCCCCCHHHHHHHHHHHHhcCCCCCCe
Q 032185 85 ILCREPHMDEAIYNQLVEKATSEGYDVSKL 114 (145)
Q Consensus 85 IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l 114 (145)
+|...+.++++..+++++.++++||-++..
T Consensus 32 ~Ln~~~~vs~~tr~rV~~~a~~lgY~pn~~ 61 (355)
T 3e3m_A 32 ALKKDSPISSETRERILKVVKDMNYVPDQV 61 (355)
T ss_dssp ------------------------------
T ss_pred HHCCCCCCCHHHHHHHHHHHHHhCCCcCHH
Confidence 777778999999999999999999987653
No 62
>2dmj_A Poly (ADP-ribose) polymerase family, member 1; zinc finger, PARP-1, ADPRT, NAD(+) ADP-ribosyltransferase 1, poly(ADP-ribose) synthetase 1; NMR {Homo sapiens}
Probab=21.48 E-value=97 Score=19.93 Aligned_cols=24 Identities=13% Similarity=0.068 Sum_probs=21.0
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCC
Q 032185 90 PHMDEAIYNQLVEKATSEGYDVSK 113 (145)
Q Consensus 90 p~l~~~~~~~~~~~~~~~G~d~~~ 113 (145)
-.|+++..+++++.+++.+++++.
T Consensus 82 ~~L~~eDq~~i~~~~e~g~~~p~~ 105 (106)
T 2dmj_A 82 SELRWDDQQKVKKTAEAGGSGPSS 105 (106)
T ss_dssp TTSCHHHHHHHHHHHHHCSSCCCC
T ss_pred HHCCHHHHHHHHHHHHhCCCCCCC
Confidence 368999999999999999998764
No 63
>3ctp_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; HET: XLF; 1.41A {Alkaliphilus metalliredigens}
Probab=20.41 E-value=21 Score=26.70 Aligned_cols=30 Identities=13% Similarity=0.122 Sum_probs=0.0
Q ss_pred EeecCCCCCHHHHHHHHHHHHhcCCCCCCe
Q 032185 85 ILCREPHMDEAIYNQLVEKATSEGYDVSKL 114 (145)
Q Consensus 85 IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l 114 (145)
+|...+.++++..+++++.++++||-++..
T Consensus 22 vln~~~~vs~~tr~rV~~~~~~lgY~pn~~ 51 (330)
T 3ctp_A 22 HLNNTGYVSEDAREKIQKVVDELNYTPNAL 51 (330)
T ss_dssp ------------------------------
T ss_pred HHcCCCCCCHHHHHHHHHHHHHhCCCcCHH
Confidence 666677899999999999999999977643
No 64
>1aoc_A Coagulogen; coagulation factor, clottable protein, cystine knot superfamily; 2.00A {Tachypleus tridentatus} SCOP: g.17.1.5
Probab=20.40 E-value=53 Score=22.56 Aligned_cols=30 Identities=17% Similarity=0.235 Sum_probs=21.0
Q ss_pred EeecCCCCCHHHHHHHHH----HHHhcCCCCCCe
Q 032185 85 ILCREPHMDEAIYNQLVE----KATSEGYDVSKL 114 (145)
Q Consensus 85 IlsR~p~l~~~~~~~~~~----~~~~~G~d~~~l 114 (145)
||+|+..+++++.+++.+ ++++-|++-.-+
T Consensus 15 ~lgr~~~vs~e~k~kiekaveava~e~~vsgrgf 48 (175)
T 1aoc_A 15 VLGRTQIVTTEIKDKIEKAVEAVAQESGVSGRGF 48 (175)
T ss_dssp TSCCSSCCCHHHHHHHHHHHHHHHHTTCSSTTSG
T ss_pred ccccceeccHHHHHHHHHHHHHHHhhcCccccce
Confidence 899999999988776544 445556654433
No 65
>1jye_A Lactose operon repressor; gene regulation, protein stability, protein DNA-binding, transcription; 1.70A {Escherichia coli} SCOP: c.93.1.1 PDB: 1lbi_A 1lbg_A* 1lbh_A 1jyf_A 3edc_A 1efa_A* 1jwl_A* 2pe5_A* 1tlf_A* 2p9h_A* 2paf_A* 1cjg_A* 1l1m_A 1osl_A 2kei_A* 2kej_A* 2kek_A* 2bjc_A 1lqc_A 1lcc_A* ...
Probab=20.23 E-value=22 Score=27.00 Aligned_cols=30 Identities=7% Similarity=0.196 Sum_probs=0.0
Q ss_pred EeecCCCCCHHHHHHHHHHHHhcCCCCCCe
Q 032185 85 ILCREPHMDEAIYNQLVEKATSEGYDVSKL 114 (145)
Q Consensus 85 IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l 114 (145)
+|...+.++++..+++++.++++||-++..
T Consensus 23 vLn~~~~vs~~tr~rV~~~a~~lgY~pn~~ 52 (349)
T 1jye_A 23 VVNQASHVSAKTREKVEAAMAELNYIPNRV 52 (349)
T ss_dssp ------------------------------
T ss_pred HHcCCCCCCHHHHHHHHHHHHHHCCCcCHH
Confidence 677777899999999999999999977653
No 66
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=20.01 E-value=22 Score=26.74 Aligned_cols=30 Identities=13% Similarity=0.287 Sum_probs=0.0
Q ss_pred EeecCCCCCHHHHHHHHHHHHhcCCCCCCe
Q 032185 85 ILCREPHMDEAIYNQLVEKATSEGYDVSKL 114 (145)
Q Consensus 85 IlsR~p~l~~~~~~~~~~~~~~~G~d~~~l 114 (145)
+|...+.++++..+++++.++++||-++..
T Consensus 24 ~Ln~~~~vs~~tr~rV~~~~~~lgY~pn~~ 53 (339)
T 3h5o_A 24 VLNQPQQVSEQLREKVMQAVDALAYVPSRS 53 (339)
T ss_dssp ------------------------------
T ss_pred HHcCCCCCCHHHHHHHHHHHHHhCCCcCHH
Confidence 677778899999999999999999977643
Done!