BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032189
(145 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q65WT0|BD31B_ORYSJ Protein BUD31 homolog 2 OS=Oryza sativa subsp. japonica
GN=Os05g0446300 PE=2 SV=1
Length = 145
Score = 278 bits (712), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 130/145 (89%), Positives = 141/145 (97%)
Query: 1 MPKVKTNRVKIPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYI 60
MPK+KT+RVK PEGWELIEPTLR+L+AKMREAENDPHDGKRKCE LWPIF+I+HQKSRYI
Sbjct: 1 MPKIKTSRVKYPEGWELIEPTLRDLEAKMREAENDPHDGKRKCEALWPIFRISHQKSRYI 60
Query: 61 FDLYYRRKEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLRCMQPRDHNFQTTCVCR 120
+DLYYRRKEISKELYEFCLDQG+AD+NLIAKWKKPGYERLCCLRC+Q RDHNF TTCVCR
Sbjct: 61 YDLYYRRKEISKELYEFCLDQGHADKNLIAKWKKPGYERLCCLRCIQTRDHNFATTCVCR 120
Query: 121 VPKNLREEKVIECVHCGCRGCASGD 145
VPK+LREEKVIECVHCGCRGCASGD
Sbjct: 121 VPKHLREEKVIECVHCGCRGCASGD 145
>sp|Q94DE2|BD31A_ORYSJ Protein BUD31 homolog 1 OS=Oryza sativa subsp. japonica
GN=Os01g0857700 PE=2 SV=1
Length = 145
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 129/145 (88%), Positives = 138/145 (95%)
Query: 1 MPKVKTNRVKIPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYI 60
MPK+KT+RVK P GWELIEPT+REL AKMREAEND HDGKRKCE LWPIF+I+HQ+SRYI
Sbjct: 1 MPKIKTSRVKYPGGWELIEPTIRELDAKMREAENDTHDGKRKCEALWPIFRISHQRSRYI 60
Query: 61 FDLYYRRKEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLRCMQPRDHNFQTTCVCR 120
+DLYYRRKEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLRC+Q RDHNF TTCVCR
Sbjct: 61 YDLYYRRKEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLRCIQTRDHNFATTCVCR 120
Query: 121 VPKNLREEKVIECVHCGCRGCASGD 145
VPK+LREEKVIECVHCGCRGCASGD
Sbjct: 121 VPKHLREEKVIECVHCGCRGCASGD 145
>sp|P35682|BD31C_ORYSJ Protein BUD31 homolog 3 OS=Oryza sativa subsp. japonica
GN=Os12g0149800 PE=2 SV=2
Length = 145
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 121/145 (83%), Positives = 135/145 (93%)
Query: 1 MPKVKTNRVKIPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYI 60
MPK+KT+ VK P+GWELIEPTL EL +KMREAENDPHDG+RKCE LWPIFKI HQ+SRY+
Sbjct: 1 MPKIKTSGVKYPDGWELIEPTLSELHSKMREAENDPHDGRRKCEALWPIFKINHQRSRYL 60
Query: 61 FDLYYRRKEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLRCMQPRDHNFQTTCVCR 120
+DLYY RKEIS+ELYEFCLDQG+ADRNLIAKWKK GYERLCCLRC+Q RDHNF TTCVCR
Sbjct: 61 YDLYYNRKEISQELYEFCLDQGHADRNLIAKWKKQGYERLCCLRCIQTRDHNFATTCVCR 120
Query: 121 VPKNLREEKVIECVHCGCRGCASGD 145
VPK+LREE+VIECVHCGC+GCASGD
Sbjct: 121 VPKHLREEQVIECVHCGCKGCASGD 145
>sp|Q962X9|BUD31_BRABE Protein BUD31 homolog OS=Branchiostoma belcheri PE=2 SV=1
Length = 144
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 104/144 (72%), Positives = 120/144 (83%), Gaps = 1/144 (0%)
Query: 1 MPKVKTNRVKIPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYI 60
MPKV+ +R PEGWELIEPTL EL KMREAE +PH+GKRK E LWPIFKI HQKSRYI
Sbjct: 1 MPKVRRSRKPPPEGWELIEPTLDELDQKMREAETEPHEGKRKVEALWPIFKIHHQKSRYI 60
Query: 61 FDLYYRRKEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLRCMQPRDHNFQTTCVCR 120
FDL+YRRK IS+ELYE+CL +G AD+NLIAKWKK GYE LCCLRC+Q RD NF T C+CR
Sbjct: 61 FDLFYRRKAISRELYEYCLKEGIADKNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICR 120
Query: 121 VPKN-LREEKVIECVHCGCRGCAS 143
VPK+ L E +++ECVHCGCRGC+
Sbjct: 121 VPKSKLEEGRIVECVHCGCRGCSG 144
>sp|O70454|BUD31_RAT Protein BUD31 homolog OS=Rattus norvegicus GN=Bud31 PE=2 SV=2
Length = 144
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 120/144 (83%), Gaps = 1/144 (0%)
Query: 1 MPKVKTNRVKIPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYI 60
MPKVK +R P+GWELIEPTL EL KMREAE +PH+GKRK E+LWPIF+I HQK+RYI
Sbjct: 1 MPKVKRSRKAPPDGWELIEPTLDELDQKMREAETEPHEGKRKVESLWPIFRIHHQKTRYI 60
Query: 61 FDLYYRRKEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLRCMQPRDHNFQTTCVCR 120
FDL+Y+RK IS+ELYE+C+ +GYAD+NLIAKWKK GYE LCCLRC+Q RD NF T C+CR
Sbjct: 61 FDLFYKRKAISRELYEYCIKEGYADKNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICR 120
Query: 121 VPKN-LREEKVIECVHCGCRGCAS 143
VPK+ L ++IEC HCGCRGC+
Sbjct: 121 VPKSKLEVGRIIECTHCGCRGCSG 144
>sp|P41223|BUD31_HUMAN Protein BUD31 homolog OS=Homo sapiens GN=BUD31 PE=1 SV=2
Length = 144
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 120/144 (83%), Gaps = 1/144 (0%)
Query: 1 MPKVKTNRVKIPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYI 60
MPKVK +R P+GWELIEPTL EL KMREAE +PH+GKRK E+LWPIF+I HQK+RYI
Sbjct: 1 MPKVKRSRKAPPDGWELIEPTLDELDQKMREAETEPHEGKRKVESLWPIFRIHHQKTRYI 60
Query: 61 FDLYYRRKEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLRCMQPRDHNFQTTCVCR 120
FDL+Y+RK IS+ELYE+C+ +GYAD+NLIAKWKK GYE LCCLRC+Q RD NF T C+CR
Sbjct: 61 FDLFYKRKAISRELYEYCIKEGYADKNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICR 120
Query: 121 VPKN-LREEKVIECVHCGCRGCAS 143
VPK+ L ++IEC HCGCRGC+
Sbjct: 121 VPKSKLEVGRIIECTHCGCRGCSG 144
>sp|Q2NKU3|BUD31_BOVIN Protein BUD31 homolog OS=Bos taurus GN=BUD31 PE=2 SV=1
Length = 144
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 120/144 (83%), Gaps = 1/144 (0%)
Query: 1 MPKVKTNRVKIPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYI 60
MPKVK +R P+GWELIEPTL EL KMREAE +PH+GKRK E+LWPIF+I HQK+RYI
Sbjct: 1 MPKVKRSRKAPPDGWELIEPTLDELDQKMREAETEPHEGKRKVESLWPIFRIHHQKTRYI 60
Query: 61 FDLYYRRKEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLRCMQPRDHNFQTTCVCR 120
FDL+Y+RK IS+ELYE+C+ +GYAD+NLIAKWKK GYE LCCLRC+Q RD NF T C+CR
Sbjct: 61 FDLFYKRKAISRELYEYCIKEGYADKNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICR 120
Query: 121 VPKN-LREEKVIECVHCGCRGCAS 143
VPK+ L ++IEC HCGCRGC+
Sbjct: 121 VPKSKLEVGRIIECTHCGCRGCSG 144
>sp|P12805|BUD31_XENLA Protein BUD31 homolog OS=Xenopus laevis GN=bud31 PE=2 SV=1
Length = 144
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 119/144 (82%), Gaps = 1/144 (0%)
Query: 1 MPKVKTNRVKIPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYI 60
MPKVK +R P+GWELIEPTL EL KMREAE DPH+GKRK E+LWPIF+I HQK+RYI
Sbjct: 1 MPKVKRSRKPPPDGWELIEPTLDELDQKMREAETDPHEGKRKVESLWPIFRIHHQKTRYI 60
Query: 61 FDLYYRRKEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLRCMQPRDHNFQTTCVCR 120
FDL+Y+RK IS+ELY++C+ +GYAD+NLIAKWKK GYE LCCLRC+Q RD NF T C+CR
Sbjct: 61 FDLFYKRKAISRELYDYCIREGYADKNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICR 120
Query: 121 VPKN-LREEKVIECVHCGCRGCAS 143
VPK L ++IEC HCGCRGC+
Sbjct: 121 VPKTKLEVGRIIECTHCGCRGCSG 144
>sp|Q567Z7|BUD31_DANRE Protein BUD31 homolog OS=Danio rerio GN=bud31 PE=2 SV=1
Length = 144
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 97/144 (67%), Positives = 118/144 (81%), Gaps = 1/144 (0%)
Query: 1 MPKVKTNRVKIPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYI 60
MPKVK +R P+GWEL+EPTL EL KMREAE +PH+GKRK E+LWPIF++ HQ+SRYI
Sbjct: 1 MPKVKRSRKPPPDGWELVEPTLDELDQKMREAETEPHEGKRKVESLWPIFRLHHQRSRYI 60
Query: 61 FDLYYRRKEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLRCMQPRDHNFQTTCVCR 120
FDL+Y+RK IS+ELY++C+ GYAD+NLIAKWKK GYE LCCLRC+Q RD NF T C+CR
Sbjct: 61 FDLFYKRKAISRELYKYCIRGGYADKNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICR 120
Query: 121 VPKN-LREEKVIECVHCGCRGCAS 143
VPK L ++IEC HCGCRGC+
Sbjct: 121 VPKGKLEVGRIIECTHCGCRGCSG 144
>sp|P34313|BUD31_CAEEL Protein BUD31 homolog OS=Caenorhabditis elegans GN=C07A9.2 PE=2
SV=1
Length = 147
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 89/142 (62%), Positives = 112/142 (78%), Gaps = 1/142 (0%)
Query: 3 KVKTNRVKIPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYIFD 62
K++ R PEGW+LIEPTL + +AKMREAE +PH+GKRK E WPIF+I HQ+SRY++D
Sbjct: 6 KLRRVRKSPPEGWDLIEPTLEQFEAKMREAETEPHEGKRKTEINWPIFRIHHQRSRYVYD 65
Query: 63 LYYRRKEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLRCMQPRDHNFQTTCVCRVP 122
+YY++ EIS+ELYEFCL +AD LIAKWKK GYE LCC++C+ RD NF T C+CRVP
Sbjct: 66 MYYKKAEISRELYEFCLTAKFADAALIAKWKKQGYENLCCVKCVNTRDSNFGTACICRVP 125
Query: 123 KN-LREEKVIECVHCGCRGCAS 143
K+ L E+VIECVHCGC GC+
Sbjct: 126 KSKLDAERVIECVHCGCHGCSG 147
>sp|O74772|CWF14_SCHPO Pre-mRNA-splicing factor cwf14 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf14 PE=1 SV=1
Length = 146
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/147 (57%), Positives = 110/147 (74%), Gaps = 3/147 (2%)
Query: 1 MPKVKTNRVK-IPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRY 59
MP+++T+R K P+G++ IEPTL E Q +MR+ EN G K E L PIF++ HQ+SRY
Sbjct: 1 MPRLRTSRTKRPPDGFDEIEPTLIEFQDRMRQIENTMGKGT-KTEMLAPIFQLHHQRSRY 59
Query: 60 IFDLYYRRKEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLRCMQPRDHNFQTTCVC 119
I+DLYY+R+ IS ELY + L Q YAD NLIAKWKKPGYE+LCCLRC+Q + F +TC+C
Sbjct: 60 IYDLYYKREAISTELYNWLLKQNYADGNLIAKWKKPGYEKLCCLRCIQTAESKFGSTCIC 119
Query: 120 RVPKN-LREEKVIECVHCGCRGCASGD 145
RVPK+ L +++ + C HCGC GCAS D
Sbjct: 120 RVPKSKLDKDQRVRCTHCGCNGCASCD 146
>sp|P25337|BUD31_YEAST Pre-mRNA-splicing factor BUD31 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BUD31 PE=1 SV=1
Length = 157
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 108/157 (68%), Gaps = 12/157 (7%)
Query: 1 MPKVKTNRVK-IPEGWELIEPTLRELQAKMREAENDPHD--GKRKCETLWPIFKIAHQKS 57
MP++KT R K P+G+E I+PTL + + ++R+A+ D + E LW I ++ HQ+S
Sbjct: 1 MPRIKTRRSKPAPDGFEKIKPTLTDFEIQLRDAQKDKSSKLAAKSNEQLWEIMQLHHQRS 60
Query: 58 RYIFDLYYRRKEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLRCMQPRDHNFQTTC 117
RYI+ LYY+RK ISK+LY++ + + YAD+ LIAKW+K GYE+LCCLRC+Q + N +TC
Sbjct: 61 RYIYTLYYKRKAISKDLYDWLIKEKYADKLLIAKWRKTGYEKLCCLRCIQKNETNNGSTC 120
Query: 118 VCRVPKNLREEKV---------IECVHCGCRGCASGD 145
+CRVP+ EE+ +CVHCGCRGCAS D
Sbjct: 121 ICRVPRAQLEEEARKKGTQVSFHQCVHCGCRGCASTD 157
>sp|Q6PGH1|BUD31_MOUSE Protein BUD31 homolog OS=Mus musculus GN=Bud31 PE=2 SV=1
Length = 103
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 83/144 (57%), Gaps = 42/144 (29%)
Query: 1 MPKVKTNRVKIPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYI 60
MPKVK +R P+GWELIEPTL EL KMRE
Sbjct: 1 MPKVKRSRKAPPDGWELIEPTLDELDQKMRE----------------------------- 31
Query: 61 FDLYYRRKEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLRCMQPRDHNFQTTCVCR 120
ELYE+C+ +GYAD+NLIAKWKK GYE LCCLRC+Q RD NF T C+CR
Sbjct: 32 ------------ELYEYCIKEGYADKNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICR 79
Query: 121 VPKN-LREEKVIECVHCGCRGCAS 143
VPK+ L ++IEC HCGCRGC+
Sbjct: 80 VPKSKLEVGRIIECTHCGCRGCSG 103
>sp|O46631|SHPS1_BOVIN Tyrosine-protein phosphatase non-receptor type substrate 1 OS=Bos
taurus GN=SIRPA PE=2 SV=1
Length = 506
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Query: 78 CLDQGYADRNLIAKWKKPGYERLCCLRCMQPRDHNF-----QTTCVCRVPKNLREEKVIE 132
C G++ RN+ KW K G E + P D+N TT V ++ + + E
Sbjct: 170 CTSHGFSPRNISLKWFKNGNELSASQTSVDPEDNNVSYSINSTTKVLLATGDVHSQVICE 229
Query: 133 CVHCGCRG 140
H +G
Sbjct: 230 VAHVTLQG 237
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.470
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,862,259
Number of Sequences: 539616
Number of extensions: 2326767
Number of successful extensions: 7399
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 7371
Number of HSP's gapped (non-prelim): 20
length of query: 145
length of database: 191,569,459
effective HSP length: 106
effective length of query: 39
effective length of database: 134,370,163
effective search space: 5240436357
effective search space used: 5240436357
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 55 (25.8 bits)