BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032198
(145 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255627487|gb|ACU14088.1| unknown [Glycine max]
Length = 227
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/139 (67%), Positives = 113/139 (81%), Gaps = 1/139 (0%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPD 62
+S++LS TPSQLCS K G+F PS+A LVKP + QM+ K+ GM+I CQATSIPADRVPD
Sbjct: 2 ASTTLSPTTPSQLCSGKSGIFSPSQALLVKPVKRQMMGKS-KGMRIACQATSIPADRVPD 60
Query: 63 MGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNT 122
MGKRQLMNLLLLGA+SLP+ ML+PY FF PPG GS+ GGT AKDA+GND+IA +WL
Sbjct: 61 MGKRQLMNLLLLGAISLPSAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGNDVIAENWLKA 120
Query: 123 HGPGDRTLTEGLKQDFSHL 141
HGPGDRTL +GLK D ++L
Sbjct: 121 HGPGDRTLAQGLKGDPTYL 139
>gi|225461287|ref|XP_002284361.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
chloroplastic isoform 1 [Vitis vinifera]
gi|147826727|emb|CAN66108.1| hypothetical protein VITISV_020089 [Vitis vinifera]
gi|302143099|emb|CBI20394.3| unnamed protein product [Vitis vinifera]
Length = 228
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/139 (68%), Positives = 111/139 (79%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPD 62
++S+LS AT SQLCS + G+ PS A L K RT G+KIKCQATSIPADRVPD
Sbjct: 2 AASTLSPATSSQLCSIRNGVLSPSHALLPKLTRTSPFVGKGKGLKIKCQATSIPADRVPD 61
Query: 63 MGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNT 122
MGKR+LMNLLLLGA+SLP+ ML+PYATFFAPPG GSAGGG AKDA+GND+IA +WL T
Sbjct: 62 MGKRKLMNLLLLGAISLPSAGMLIPYATFFAPPGTGSAGGGIVAKDALGNDVIADEWLKT 121
Query: 123 HGPGDRTLTEGLKQDFSHL 141
HGPGDRTLT+GLK D ++L
Sbjct: 122 HGPGDRTLTQGLKGDPTYL 140
>gi|255640787|gb|ACU20677.1| unknown [Glycine max]
Length = 262
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 93/139 (66%), Positives = 112/139 (80%), Gaps = 1/139 (0%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPD 62
+S++LS TPSQLCS K G+F S+A LVKP + QM+ K+ G++I CQATSI ADRVPD
Sbjct: 2 ASTTLSPTTPSQLCSGKSGIFSSSQALLVKPVKRQMMGKSK-GLRIACQATSISADRVPD 60
Query: 63 MGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNT 122
MGKRQLMNLLLLGA+SLPT ML+PY FF PPG GS+ GGT AKDA+GND+IA +WL
Sbjct: 61 MGKRQLMNLLLLGAISLPTAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGNDVIAENWLKA 120
Query: 123 HGPGDRTLTEGLKQDFSHL 141
HGPGDRTLT+GLK D ++L
Sbjct: 121 HGPGDRTLTQGLKGDPTYL 139
>gi|356549980|ref|XP_003543368.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
chloroplastic-like [Glycine max]
Length = 227
Score = 191 bits (485), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 93/139 (66%), Positives = 112/139 (80%), Gaps = 1/139 (0%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPD 62
+S++LS TPSQLCS K G+F S+A LVKP + QM+ K+ G++I CQATSI ADRVPD
Sbjct: 2 ASTTLSPTTPSQLCSGKSGIFSSSQALLVKPVKRQMMGKS-KGLRIACQATSISADRVPD 60
Query: 63 MGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNT 122
MGKRQLMNLLLLGA+SLPT ML+PY FF PPG GS+ GGT AKDA+GND+IA +WL
Sbjct: 61 MGKRQLMNLLLLGAISLPTAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGNDVIAENWLKA 120
Query: 123 HGPGDRTLTEGLKQDFSHL 141
HGPGDRTLT+GLK D ++L
Sbjct: 121 HGPGDRTLTQGLKGDPTYL 139
>gi|388490498|gb|AFK33315.1| unknown [Lotus japonicus]
Length = 227
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/139 (71%), Positives = 115/139 (82%), Gaps = 1/139 (0%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPD 62
SS++LS TPSQLCS K G+FCPS+A LVKPAR QMV K G++I C ATSIPADRVPD
Sbjct: 2 SSTTLSPVTPSQLCSGKSGIFCPSQALLVKPARNQMVGKA-KGIRIACMATSIPADRVPD 60
Query: 63 MGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNT 122
M KR+L+NLLLLGA+SLP+ MLVPYATFFAPPG GSA GGT AKDAIGND++A WL
Sbjct: 61 MEKRKLLNLLLLGAISLPSAGMLVPYATFFAPPGSGSATGGTIAKDAIGNDVVAEQWLKA 120
Query: 123 HGPGDRTLTEGLKQDFSHL 141
HGPGDRTLT+GLK D ++L
Sbjct: 121 HGPGDRTLTQGLKGDPTYL 139
>gi|359493904|ref|XP_003634690.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
chloroplastic isoform 2 [Vitis vinifera]
Length = 244
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 94/137 (68%), Positives = 108/137 (78%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPD 62
++S+LS AT SQLCS + G+ PS A L K RT G+KIKCQATSIPADRVPD
Sbjct: 2 AASTLSPATSSQLCSIRNGVLSPSHALLPKLTRTSPFVGKGKGLKIKCQATSIPADRVPD 61
Query: 63 MGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNT 122
MGKR+LMNLLLLGA+SLP+ ML+PYATFFAPPG GSAGGG AKDA+GND+IA +WL T
Sbjct: 62 MGKRKLMNLLLLGAISLPSAGMLIPYATFFAPPGTGSAGGGIVAKDALGNDVIADEWLKT 121
Query: 123 HGPGDRTLTEGLKQDFS 139
HGPGDRTLT+GLK S
Sbjct: 122 HGPGDRTLTQGLKSFIS 138
>gi|351726724|ref|NP_001237648.1| Rieske iron-sulphur protein precursor [Glycine max]
gi|158935079|emb|CAM57107.1| Rieske iron-sulphur protein precursor [Glycine max]
Length = 227
Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 92/141 (65%), Positives = 112/141 (79%), Gaps = 1/141 (0%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPD 62
+S++LS TPSQLCS K G+F S+A LVKP + QM+ K+ G++I CQATSI ADRVPD
Sbjct: 2 ASTTLSPTTPSQLCSGKSGIFSSSQALLVKPVKRQMMGKS-KGLRIACQATSISADRVPD 60
Query: 63 MGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNT 122
MGKRQLMNLLLLGA+SLPT ML+PY FF PPG GS+ GGT AKDA+GND+IA +WL
Sbjct: 61 MGKRQLMNLLLLGAISLPTAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGNDVIAENWLKA 120
Query: 123 HGPGDRTLTEGLKQDFSHLQL 143
HGPGDRTLT+GLK ++L +
Sbjct: 121 HGPGDRTLTQGLKGGPTYLAV 141
>gi|356544886|ref|XP_003540878.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome b6-f complex iron-sulfur
subunit, chloroplastic-like [Glycine max]
Length = 134
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/133 (67%), Positives = 106/133 (79%), Gaps = 1/133 (0%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPD 62
+S++LS+ATPSQLCS K G+FCPS+A VKP ++QM K G++I QATS PADR+PD
Sbjct: 2 ASTTLSAATPSQLCSGKSGIFCPSQALFVKPMKSQMXGKG-KGVRITYQATSFPADRIPD 60
Query: 63 MGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNT 122
+GKRQLMNLLLLGA SLPT ML+PY FF PPG G + GGT AKD IGND+IA WL T
Sbjct: 61 IGKRQLMNLLLLGAXSLPTSSMLLPYTYFFVPPGAGPSTGGTVAKDPIGNDVIAEKWLET 120
Query: 123 HGPGDRTLTEGLK 135
HGPGDRTLT+GLK
Sbjct: 121 HGPGDRTLTQGLK 133
>gi|315364830|gb|ADU05416.1| chloroplast Rieske-type ion-sulfur protein [Citrullus lanatus]
Length = 227
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/139 (66%), Positives = 109/139 (78%), Gaps = 1/139 (0%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPD 62
+SS+LSSATPSQLC+S+ +FCPS+A L KP TQM K +KI CQATSIPADRVPD
Sbjct: 2 ASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKG-KEVKISCQATSIPADRVPD 60
Query: 63 MGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNT 122
MGKR+ MNLLLLGA+ LPT ML PY FF PPG G AGGG AKDA+GND++A +WL
Sbjct: 61 MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWLKA 120
Query: 123 HGPGDRTLTEGLKQDFSHL 141
HGPGDRTLT+GL+ D ++L
Sbjct: 121 HGPGDRTLTQGLRGDPTYL 139
>gi|359485728|ref|XP_003633324.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
chloroplastic-like isoform 2 [Vitis vinifera]
Length = 214
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 106/142 (74%), Gaps = 5/142 (3%)
Query: 1 MASSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPAD-R 59
MAS S+LS PSQLC +K G+ S L P RT + K ++++ QATS PAD R
Sbjct: 1 MASFSTLSHTCPSQLCFTKNGVVSKS---LANPTRTHFLKKGNY-LRVRFQATSFPADDR 56
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMGKRQLMNLLLLGAVSLPT ML+PYA+FF PPG GSAGG T AKDAIGND+IA +W
Sbjct: 57 VPDMGKRQLMNLLLLGAVSLPTAIMLIPYASFFVPPGSGSAGGATIAKDAIGNDVIAEEW 116
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L HGPGDRTLT+GLK D ++L
Sbjct: 117 LKNHGPGDRTLTQGLKGDPTYL 138
>gi|136707|sp|P26291.1|UCRIA_PEA RecName: Full=Cytochrome b6-f complex iron-sulfur subunit,
chloroplastic; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; AltName: Full=Rieske iron-sulfur
protein; Short=ISP; Short=RISP; Flags: Precursor
gi|20832|emb|CAA45151.1| chloroplast Rieske FeS protein [Pisum sativum]
Length = 230
Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 94/139 (67%), Positives = 110/139 (79%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPD 62
SS++LS TPSQLCS K G+ CPS A LVKP RTQM + GMKI CQATSIPADRVPD
Sbjct: 2 SSTTLSPTTPSQLCSGKSGISCPSIALLVKPTRTQMTGRGNKGMKITCQATSIPADRVPD 61
Query: 63 MGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNT 122
M KR+ +NLLLLGA+SLPT MLVPY +F PPG GS+ GGT AKDA+GND++A +WL T
Sbjct: 62 MSKRKTLNLLLLGALSLPTAGMLVPYGSFLVPPGSGSSTGGTVAKDAVGNDVVATEWLKT 121
Query: 123 HGPGDRTLTEGLKQDFSHL 141
H PGDRTLT+GLK D ++L
Sbjct: 122 HAPGDRTLTQGLKGDPTYL 140
>gi|225447691|ref|XP_002276770.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
chloroplastic-like isoform 1 [Vitis vinifera]
Length = 226
Score = 174 bits (442), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 106/142 (74%), Gaps = 5/142 (3%)
Query: 1 MASSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPAD-R 59
MAS S+LS PSQLC +K G+ S L P RT + K ++++ QATS PAD R
Sbjct: 1 MASFSTLSHTCPSQLCFTKNGVVSKS---LANPTRTHFLKKGNY-LRVRFQATSFPADDR 56
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMGKRQLMNLLLLGAVSLPT ML+PYA+FF PPG GSAGG T AKDAIGND+IA +W
Sbjct: 57 VPDMGKRQLMNLLLLGAVSLPTAIMLIPYASFFVPPGSGSAGGATIAKDAIGNDVIAEEW 116
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L HGPGDRTLT+GLK D ++L
Sbjct: 117 LKNHGPGDRTLTQGLKGDPTYL 138
>gi|449438050|ref|XP_004136803.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
chloroplastic-like [Cucumis sativus]
gi|449530696|ref|XP_004172329.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
chloroplastic-like [Cucumis sativus]
gi|395455815|emb|CCJ09121.1| Rieske type ion sulfur subunit (chloroplast) [Cucumis sativus]
Length = 227
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/139 (66%), Positives = 107/139 (76%), Gaps = 1/139 (0%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPD 62
+SS+LSSATPSQLC+S+ +FCPS+A L KP TQM K + +KI CQATSIPADRVPD
Sbjct: 2 ASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKV-VKISCQATSIPADRVPD 60
Query: 63 MGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNT 122
M KR+ MNLLLLGA+ LPT ML PY FF PPG G AGGG AKDA GND+ A +WL
Sbjct: 61 MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEWLKA 120
Query: 123 HGPGDRTLTEGLKQDFSHL 141
HGPGDRTLT+GLK D ++L
Sbjct: 121 HGPGDRTLTQGLKGDPTYL 139
>gi|357453611|ref|XP_003597086.1| Cytochrome b6-f complex iron-sulfur subunit [Medicago truncatula]
gi|217071232|gb|ACJ83976.1| unknown [Medicago truncatula]
gi|355486134|gb|AES67337.1| Cytochrome b6-f complex iron-sulfur subunit [Medicago truncatula]
gi|388498486|gb|AFK37309.1| unknown [Medicago truncatula]
Length = 229
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/139 (67%), Positives = 111/139 (79%), Gaps = 1/139 (0%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPD 62
SS++LS ATPSQLCS K G+ CPS LVKP RTQM+ K GM I CQAT IPADRVPD
Sbjct: 2 SSTTLSPATPSQLCSGKSGISCPSIGLLVKPTRTQMIGKG-KGMSITCQATGIPADRVPD 60
Query: 63 MGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNT 122
M KR+ +NLLLLGA+SLPT MLVPY +F PPG GS+ GGT AKDA+GND++AA+WL +
Sbjct: 61 MSKRETLNLLLLGALSLPTAGMLVPYGSFLVPPGSGSSTGGTVAKDAVGNDVVAAEWLKS 120
Query: 123 HGPGDRTLTEGLKQDFSHL 141
HGPGDRTLT+GLK D ++L
Sbjct: 121 HGPGDRTLTQGLKGDPTYL 139
>gi|296087457|emb|CBI34046.3| unnamed protein product [Vitis vinifera]
Length = 281
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/129 (67%), Positives = 100/129 (77%), Gaps = 2/129 (1%)
Query: 13 SQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLL 72
S LC + G+ PS A L K R G+KIKCQATSIPA+RVPDMGKR+LMNLL
Sbjct: 67 SGLCMN--GVLSPSHALLPKLTRMSPFVGKGKGLKIKCQATSIPANRVPDMGKRKLMNLL 124
Query: 73 LLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTE 132
LLG VSLP+ ML+PYATFFAPPG GSAGGGT AKDA+GND+IA +WL THGPGDRTLT+
Sbjct: 125 LLGVVSLPSAGMLIPYATFFAPPGTGSAGGGTVAKDALGNDVIADEWLKTHGPGDRTLTQ 184
Query: 133 GLKQDFSHL 141
GLK D ++L
Sbjct: 185 GLKGDPTYL 193
>gi|359475739|ref|XP_002265183.2| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
chloroplastic-like [Vitis vinifera]
Length = 212
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/121 (69%), Positives = 96/121 (79%)
Query: 21 GMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLP 80
G+ PS A L K R G+KIKCQATSIPA+RVPDMGKR+LMNLLLLG VSLP
Sbjct: 4 GVLSPSHALLPKLTRMSPFVGKGKGLKIKCQATSIPANRVPDMGKRKLMNLLLLGVVSLP 63
Query: 81 TGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKQDFSH 140
+ ML+PYATFFAPPG GSAGGGT AKDA+GND+IA +WL THGPGDRTLT+GLK D ++
Sbjct: 64 SAGMLIPYATFFAPPGTGSAGGGTVAKDALGNDVIADEWLKTHGPGDRTLTQGLKGDPTY 123
Query: 141 L 141
L
Sbjct: 124 L 124
>gi|255544369|ref|XP_002513246.1| Cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor,
putative [Ricinus communis]
gi|223547620|gb|EEF49114.1| Cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor,
putative [Ricinus communis]
Length = 220
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/139 (70%), Positives = 112/139 (80%), Gaps = 8/139 (5%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPD 62
+SS+LS T SQLCS K +F ++P RT MVTK+ MK+ CQATSIPADRVPD
Sbjct: 2 ASSTLSPPTTSQLCSGKXAVF-------LRPTRTHMVTKD-RAMKLTCQATSIPADRVPD 53
Query: 63 MGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNT 122
MGKRQLMNLLLLGA+SLPTGFMLVPYA+FFAPPG G AGGGT AKDA+GND+IA WL T
Sbjct: 54 MGKRQLMNLLLLGAISLPTGFMLVPYASFFAPPGTGGAGGGTVAKDAVGNDVIAELWLKT 113
Query: 123 HGPGDRTLTEGLKQDFSHL 141
HGPGDRTLT+GLK D ++L
Sbjct: 114 HGPGDRTLTQGLKGDPTYL 132
>gi|224145554|ref|XP_002325684.1| predicted protein [Populus trichocarpa]
gi|118486166|gb|ABK94926.1| unknown [Populus trichocarpa]
gi|118487342|gb|ABK95499.1| unknown [Populus trichocarpa]
gi|222862559|gb|EEF00066.1| predicted protein [Populus trichocarpa]
Length = 228
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/140 (71%), Positives = 113/140 (80%), Gaps = 2/140 (1%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPAD-RVP 61
+SS+LS ATPSQLCSSK GMF P+ A VKP RT MV K GM+I CQATS+PAD RVP
Sbjct: 2 ASSTLSPATPSQLCSSKSGMFSPTHAVFVKPTRTNMVLKE-RGMRISCQATSVPADDRVP 60
Query: 62 DMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLN 121
DMGKR+LMNLLLLGA+SLPT MLVPY FF P GLG GGGT AKDA+GNDI+A WLN
Sbjct: 61 DMGKRELMNLLLLGALSLPTAGMLVPYTYFFVPTGLGGGGGGTVAKDALGNDIVAEQWLN 120
Query: 122 THGPGDRTLTEGLKQDFSHL 141
THGPGDRTL++GLK D ++L
Sbjct: 121 THGPGDRTLSQGLKGDPTYL 140
>gi|312283009|dbj|BAJ34370.1| unnamed protein product [Thellungiella halophila]
Length = 229
Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/141 (65%), Positives = 111/141 (78%), Gaps = 4/141 (2%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPART--QMVTKNPMGMKIKCQATSIPADRV 60
+SSS+S AT QL SS+ M SR VKP RT QMV K +G++I CQATSIPADRV
Sbjct: 2 ASSSISPAT--QLGSSRSAMLAMSRGLFVKPTRTNHQMVRKEKIGLRIACQATSIPADRV 59
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
PDM KR+L+NLLL+GA+SLP+G+MLVPYATFF PPG G GGGT AKDA+GND+IA +WL
Sbjct: 60 PDMEKRKLLNLLLVGALSLPSGYMLVPYATFFVPPGSGGGGGGTPAKDALGNDVIADEWL 119
Query: 121 NTHGPGDRTLTEGLKQDFSHL 141
THG GDRTLT+GLK D ++L
Sbjct: 120 KTHGAGDRTLTQGLKGDPTYL 140
>gi|224126819|ref|XP_002319934.1| predicted protein [Populus trichocarpa]
gi|222858310|gb|EEE95857.1| predicted protein [Populus trichocarpa]
Length = 228
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 112/140 (80%), Gaps = 2/140 (1%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADR-VP 61
+S++LS ATPSQLCSSK GMF P+ A VKPART MVTK GM+I CQATSIPAD VP
Sbjct: 2 ASTTLSPATPSQLCSSKSGMFSPTHAAFVKPARTNMVTKE-KGMRIACQATSIPADDGVP 60
Query: 62 DMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLN 121
DMGKR+LMNLLLLGA+SLPT ML+PY FF P GLG GGGT AKDA+GNDI+ WL
Sbjct: 61 DMGKRELMNLLLLGALSLPTAGMLIPYTYFFVPSGLGGGGGGTVAKDALGNDIVVEQWLK 120
Query: 122 THGPGDRTLTEGLKQDFSHL 141
THGPGDRTL++GLK D ++L
Sbjct: 121 THGPGDRTLSQGLKGDPTYL 140
>gi|21311|emb|CAA29590.1| Rieske FeS-precursor [Spinacia oleracea]
gi|226151|prf||1412276A rieske FeS precursor protein
Length = 247
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/143 (65%), Positives = 115/143 (80%), Gaps = 3/143 (2%)
Query: 1 MASSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQ-MVTKNPM-GMKIKCQATSIPAD 58
+ +S +LSSATPSQLCSSK GMF PS A L K R +++K + GMK+ CQATSIPAD
Sbjct: 17 LMASFTLSSATPSQLCSSKNGMFAPSLA-LAKAGRVNVLISKERIRGMKLTCQATSIPAD 75
Query: 59 RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAAD 118
VPDM KR+ +NLLLLGA+SLPTG+ML+PYA+FF PPG G+ GGT AKDA+GND+IAA+
Sbjct: 76 NVPDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAE 135
Query: 119 WLNTHGPGDRTLTEGLKQDFSHL 141
WL TH PGDRTLT+GLK D ++L
Sbjct: 136 WLKTHAPGDRTLTQGLKGDPTYL 158
>gi|297813975|ref|XP_002874871.1| Rieske fes protein [Arabidopsis lyrata subsp. lyrata]
gi|297320708|gb|EFH51130.1| Rieske fes protein [Arabidopsis lyrata subsp. lyrata]
Length = 229
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/141 (65%), Positives = 112/141 (79%), Gaps = 4/141 (2%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPART--QMVTKNPMGMKIKCQATSIPADRV 60
+SSSLS AT QL SS+ + SR VKP +T QMV K +G++I CQA+SIPADRV
Sbjct: 2 ASSSLSPAT--QLGSSRSALMAMSRGLFVKPTKTNHQMVRKEKIGLRIACQASSIPADRV 59
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
PDM KR+L+NLLL+GA+SLPTG+MLVPYATFF PPG G GGGT AKDA+GND++A +WL
Sbjct: 60 PDMEKRKLLNLLLVGALSLPTGYMLVPYATFFVPPGTGGGGGGTPAKDALGNDVVAEEWL 119
Query: 121 NTHGPGDRTLTEGLKQDFSHL 141
THGPGDRTLT+GLK D ++L
Sbjct: 120 KTHGPGDRTLTQGLKGDPTYL 140
>gi|68067963|sp|P08980.2|UCRIA_SPIOL RecName: Full=Cytochrome b6-f complex iron-sulfur subunit,
chloroplastic; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; AltName: Full=Rieske iron-sulfur
protein; Short=ISP; Short=RISP; Flags: Precursor
Length = 230
Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/141 (66%), Positives = 114/141 (80%), Gaps = 3/141 (2%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQ-MVTKNPM-GMKIKCQATSIPADRV 60
+S +LSSATPSQLCSSK GMF PS A L K R +++K + GMK+ CQATSIPAD V
Sbjct: 2 ASFTLSSATPSQLCSSKNGMFAPSLA-LAKAGRVNVLISKERIRGMKLTCQATSIPADNV 60
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
PDM KR+ +NLLLLGA+SLPTG+ML+PYA+FF PPG G+ GGT AKDA+GND+IAA+WL
Sbjct: 61 PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL 120
Query: 121 NTHGPGDRTLTEGLKQDFSHL 141
TH PGDRTLT+GLK D ++L
Sbjct: 121 KTHAPGDRTLTQGLKGDPTYL 141
>gi|68566152|sp|O49078.1|UCRIA_FRIAG RecName: Full=Cytochrome b6-f complex iron-sulfur subunit,
chloroplastic; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; AltName: Full=Rieske iron-sulfur
protein; Short=ISP; Short=RISP; Flags: Precursor
gi|2921504|gb|AAC04807.1| cytochrome B6-F complex iron-sulfur subunit precursor [Fritillaria
agrestis]
Length = 230
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 104/141 (73%)
Query: 1 MASSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRV 60
MAS++ ++ TPSQL ++K G + PSRA L K AR K + K+ CQATSIPADRV
Sbjct: 1 MASTTLSATPTPSQLSAAKNGAYSPSRALLGKTARGLYPEKEMVSRKVTCQATSIPADRV 60
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
PDMGKRQ MNLLLLGA+SLPT ML+PY FF PP G GGG AKDA+GNDI+AA WL
Sbjct: 61 PDMGKRQTMNLLLLGALSLPTAGMLIPYGAFFVPPSSGGGGGGIVAKDAVGNDIVAAAWL 120
Query: 121 NTHGPGDRTLTEGLKQDFSHL 141
THGPGDRTL +GL+ D ++L
Sbjct: 121 KTHGPGDRTLAQGLRGDPTYL 141
>gi|115472727|ref|NP_001059962.1| Os07g0556200 [Oryza sativa Japonica Group]
gi|68566176|sp|Q69S39.1|UCRIA_ORYSJ RecName: Full=Cytochrome b6-f complex iron-sulfur subunit,
chloroplastic; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; AltName: Full=Rieske iron-sulfur
protein; Short=ISP; Short=RISP; Flags: Precursor
gi|3885886|gb|AAC78103.1| Rieske Fe-S precursor protein [Oryza sativa Japonica Group]
gi|50508582|dbj|BAD30907.1| rieske Fe-S precursor protein [Oryza sativa Japonica Group]
gi|113611498|dbj|BAF21876.1| Os07g0556200 [Oryza sativa Japonica Group]
gi|125558773|gb|EAZ04309.1| hypothetical protein OsI_26450 [Oryza sativa Indica Group]
gi|125582012|gb|EAZ22943.1| hypothetical protein OsJ_06631 [Oryza sativa Japonica Group]
gi|215701172|dbj|BAG92596.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 225
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/142 (54%), Positives = 97/142 (68%), Gaps = 6/142 (4%)
Query: 1 MASSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQA-TSIPADR 59
MAS++ +++ P+QLC S+ + P + R I CQA +SIPADR
Sbjct: 1 MASTALSTASNPTQLCRSRASLGKPVKGLGFGRERVPRTATT-----ITCQAASSIPADR 55
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMGKRQLMNLLLLGA+SLPT MLVPY FF P G G+AGGG AKD +GND++A +W
Sbjct: 56 VPDMGKRQLMNLLLLGAISLPTVGMLVPYGAFFIPAGSGNAGGGQVAKDKLGNDVLAEEW 115
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L THGP DRTLT+GLK D ++L
Sbjct: 116 LKTHGPNDRTLTQGLKGDPTYL 137
>gi|326518434|dbj|BAJ88246.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518907|dbj|BAJ92614.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 222
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 91/141 (64%), Gaps = 7/141 (4%)
Query: 1 MASSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRV 60
MAS++ +++ P+QLC ++ C KP + + + I C A SI ADRV
Sbjct: 1 MASTALSTASNPTQLCRTRASSLC-------KPVKGLGFGRERIPRNITCMAGSISADRV 53
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
PDM KR+LMNLLLLGA+SLPT MLVPY +F P G GS GG AKD +GNDI+ DWL
Sbjct: 54 PDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPAGSGSNAGGVAAKDKLGNDILVEDWL 113
Query: 121 NTHGPGDRTLTEGLKQDFSHL 141
THGP DRTL +GLK D ++L
Sbjct: 114 KTHGPNDRTLAQGLKGDPTYL 134
>gi|68566191|sp|Q7X9A6.1|UCRIA_WHEAT RecName: Full=Cytochrome b6-f complex iron-sulfur subunit,
chloroplastic; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; AltName: Full=Rieske iron-sulfur
protein; Short=ISP; Short=RISP; Flags: Precursor
gi|32394644|gb|AAM88439.1| putative Rieske Fe-S precursor protein [Triticum aestivum]
Length = 222
Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 91/141 (64%), Gaps = 7/141 (4%)
Query: 1 MASSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRV 60
MAS++ +++ P+QLC ++ C KP + + + I C A SI ADRV
Sbjct: 1 MASTALSTASNPTQLCRTRASSLC-------KPVKGLGFGRERIPRNITCMAGSISADRV 53
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
PDM KR+LMNLLLLGA+SLPT MLVPY +F P G GS GG AKD +GNDI+ DWL
Sbjct: 54 PDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPAGSGSNAGGVAAKDKLGNDILVEDWL 113
Query: 121 NTHGPGDRTLTEGLKQDFSHL 141
THGP DRTL +GLK D ++L
Sbjct: 114 KTHGPNDRTLAQGLKGDPTYL 134
>gi|110742000|dbj|BAE98939.1| receptor-like protein kinase like protein [Arabidopsis thaliana]
Length = 875
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 90/141 (63%), Positives = 109/141 (77%), Gaps = 4/141 (2%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPART--QMVTKNPMGMKIKCQATSIPADRV 60
+SSSLS AT QL SS+ + S VKP + QMV K +G++I CQA+SIPADRV
Sbjct: 2 ASSSLSPAT--QLGSSRSALMAMSSGLFVKPTKMNHQMVRKEKIGLRISCQASSIPADRV 59
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
PDM KR+ +NLLLLGA+SLPTG+MLVPYATFF PPG G GGGT AKDA+GND++AA+W
Sbjct: 60 PDMEKRKTLNLLLLGALSLPTGYMLVPYATFFVPPGTGGGGGGTPAKDALGNDVVAAEWF 119
Query: 121 NTHGPGDRTLTEGLKQDFSHL 141
THGPGDRTLT+GLK D ++L
Sbjct: 120 KTHGPGDRTLTQGLKGDPTYL 140
>gi|15236275|ref|NP_192237.1| cytochrome b6-f complex iron-sulfur subunit [Arabidopsis thaliana]
gi|68566234|sp|Q9ZR03.1|UCRIA_ARATH RecName: Full=Cytochrome b6-f complex iron-sulfur subunit,
chloroplastic; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; AltName: Full=Proton gradient
regulation protein 1; AltName: Full=Rieske iron-sulfur
protein; Short=ISP; Short=RISP; Flags: Precursor
gi|13926182|gb|AAK49572.1|AF370566_1 putative component of cytochrome B6-F complex [Arabidopsis
thaliana]
gi|4262156|gb|AAD14456.1| putative component of cytochrome B6-F complex [Arabidopsis
thaliana]
gi|5725450|emb|CAB52433.1| rieske iron-sulfur protein precursor [Arabidopsis thaliana]
gi|7270198|emb|CAB77813.1| putative component of cytochrome B6-F complex [Arabidopsis
thaliana]
gi|332656901|gb|AEE82301.1| cytochrome b6-f complex iron-sulfur subunit [Arabidopsis thaliana]
Length = 229
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/141 (64%), Positives = 110/141 (78%), Gaps = 4/141 (2%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPAR--TQMVTKNPMGMKIKCQATSIPADRV 60
+SSSLS AT QL SS+ + S VKP + QMV K +G++I CQA+SIPADRV
Sbjct: 2 ASSSLSPAT--QLGSSRSALMAMSSGLFVKPTKMNHQMVRKEKIGLRISCQASSIPADRV 59
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
PDM KR+ +NLLLLGA+SLPTG+MLVPYATFF PPG G GGGT AKDA+GND++AA+WL
Sbjct: 60 PDMEKRKTLNLLLLGALSLPTGYMLVPYATFFVPPGTGGGGGGTPAKDALGNDVVAAEWL 119
Query: 121 NTHGPGDRTLTEGLKQDFSHL 141
THGPGDRTLT+GLK D ++L
Sbjct: 120 KTHGPGDRTLTQGLKGDPTYL 140
>gi|9843639|emb|CAC03598.1| Rieske FeS protein [Arabidopsis thaliana]
gi|304281937|gb|ADM21175.1| photosynthetic electron transfer C [Arabidopsis thaliana]
Length = 229
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/141 (64%), Positives = 110/141 (78%), Gaps = 4/141 (2%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPAR--TQMVTKNPMGMKIKCQATSIPADRV 60
+SSSLS AT QL SS+ + S VKP + QMV K +G++I CQA+SIPADRV
Sbjct: 2 ASSSLSPAT--QLGSSRSALMAMSSGLFVKPTKMNHQMVRKEKIGLRIACQASSIPADRV 59
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
PDM KR+ +NLLLLGA+SLPTG+MLVPYATFF PPG G GGGT AKDA+GND++AA+WL
Sbjct: 60 PDMEKRKTLNLLLLGALSLPTGYMLVPYATFFVPPGTGGGGGGTPAKDALGNDVVAAEWL 119
Query: 121 NTHGPGDRTLTEGLKQDFSHL 141
THGPGDRTLT+GLK D ++L
Sbjct: 120 KTHGPGDRTLTQGLKGDPTYL 140
>gi|357122458|ref|XP_003562932.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
chloroplastic-like [Brachypodium distachyon]
Length = 221
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 92/141 (65%), Gaps = 8/141 (5%)
Query: 1 MASSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRV 60
MAS++ +++ P++LC PS L KP R + + I C A SI ADRV
Sbjct: 1 MASTALSTASNPTRLCRP-----LPS---LGKPVRGLGFARERIPRNITCMAGSISADRV 52
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
PDM KR+LMNLLLLGA+SLPT MLVPY +F P G GS GGT AKD +GNDI+ +WL
Sbjct: 53 PDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPAGSGSNTGGTVAKDKLGNDILVEEWL 112
Query: 121 NTHGPGDRTLTEGLKQDFSHL 141
THGP DRTL +GLK D ++L
Sbjct: 113 KTHGPNDRTLAQGLKGDPTYL 133
>gi|195612712|gb|ACG28186.1| cytochrome b6-f complex iron-sulfur subunit [Zea mays]
Length = 226
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/132 (54%), Positives = 87/132 (65%), Gaps = 7/132 (5%)
Query: 11 TPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQA-TSIPADRVPDMGKRQLM 69
P+QLC S+ + P + + R + I CQA +SI ADRVPDM KR+LM
Sbjct: 12 NPTQLCRSRASLGKPVKGLGLSMGRERAQRS------IVCQAASSISADRVPDMEKRKLM 65
Query: 70 NLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRT 129
NLLLLGA+SLPT M+VPY FF P G G+AGGGT AKD +GNDI WLNTHGP DRT
Sbjct: 66 NLLLLGAISLPTVGMVVPYGAFFVPAGSGNAGGGTYAKDKLGNDITVEAWLNTHGPNDRT 125
Query: 130 LTEGLKQDFSHL 141
L +GLK D ++L
Sbjct: 126 LAQGLKGDPTYL 137
>gi|226503409|ref|NP_001141265.1| iron-sulfur protein2 [Zea mays]
gi|194689486|gb|ACF78827.1| unknown [Zea mays]
gi|194703650|gb|ACF85909.1| unknown [Zea mays]
gi|195655777|gb|ACG47356.1| cytochrome b6-f complex iron-sulfur subunit [Zea mays]
gi|413936538|gb|AFW71089.1| iron-sulfur protein2 [Zea mays]
Length = 226
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/132 (53%), Positives = 86/132 (65%), Gaps = 7/132 (5%)
Query: 11 TPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQA-TSIPADRVPDMGKRQLM 69
P+QL S+ + P + + R + I CQA +SI ADRVPDM KR+LM
Sbjct: 12 NPTQLYRSRASLGKPVKGLGLSMGRERAQRS------IVCQAASSISADRVPDMEKRKLM 65
Query: 70 NLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRT 129
NLLLLGA+SLPT M+VPY FF P G G+AGGGT AKD +GNDI WLNTHGP DRT
Sbjct: 66 NLLLLGAISLPTVGMVVPYGAFFVPAGSGNAGGGTYAKDKLGNDITVEAWLNTHGPNDRT 125
Query: 130 LTEGLKQDFSHL 141
L +GLK D ++L
Sbjct: 126 LAQGLKGDPTYL 137
>gi|413968462|gb|AFW90568.1| putative Rieske Fe-S protein precursor [Solanum tuberosum]
Length = 230
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/144 (62%), Positives = 105/144 (72%), Gaps = 8/144 (5%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMG----MKIKCQATSIPAD 58
+SS+LS TPSQLCSSK G+ S+A LVKP + + + MG MK+KC A SIPAD
Sbjct: 2 ASSTLSHVTPSQLCSSKSGVSSVSQALLVKPMK---INGHGMGKDKRMKVKCMAASIPAD 58
Query: 59 -RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAA 117
RVPDM KR LMNLLLLGA +LPTG MLVPYATFFAPPG G GT AKDA GND++
Sbjct: 59 DRVPDMEKRNLMNLLLLGAPALPTGGMLVPYATFFAPPGSGGGSSGTIAKDANGNDVVVT 118
Query: 118 DWLNTHGPGDRTLTEGLKQDFSHL 141
+WL TH PG RTLT+GLK D ++L
Sbjct: 119 EWLKTHAPGTRTLTQGLKGDPTYL 142
>gi|194702912|gb|ACF85540.1| unknown [Zea mays]
Length = 193
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/95 (68%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 48 IKCQA-TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTA 106
I CQA +SI ADRVPDM KR+LMNLLLLGA+SLPT M+VPY FF P G G+AGGGT A
Sbjct: 10 IVCQAASSISADRVPDMEKRKLMNLLLLGAISLPTVGMVVPYGAFFVPAGSGNAGGGTYA 69
Query: 107 KDAIGNDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
KD +GNDI WLNTHGP DRTL +GLK D ++L
Sbjct: 70 KDKLGNDITVEAWLNTHGPNDRTLAQGLKGDPTYL 104
>gi|158935083|emb|CAM57109.1| Rieske iron-sulphur protein precursor [Zantedeschia aethiopica]
Length = 238
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/150 (56%), Positives = 103/150 (68%), Gaps = 9/150 (6%)
Query: 1 MASSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQ---------MVTKNPMGMKIKCQ 51
MA+++ ++ SQLCSSK G P R L + Q + + G K+ C
Sbjct: 1 MAATALSTAVAASQLCSSKNGPCSPLRGLLFRGLGLQGGERRGGMGLQGRERRGGKVTCM 60
Query: 52 ATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIG 111
A+SIPADRVPDMGKRQLMNLLLLGA+SLPT M+VPYA FF PP G GGGT AKDA+G
Sbjct: 61 ASSIPADRVPDMGKRQLMNLLLLGALSLPTAIMVVPYAPFFVPPSSGGDGGGTVAKDALG 120
Query: 112 NDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
ND+IA +WL THGPGDRTLT+GLK D ++L
Sbjct: 121 NDVIAVEWLKTHGPGDRTLTQGLKGDPTYL 150
>gi|296081261|emb|CBI18005.3| unnamed protein product [Vitis vinifera]
Length = 167
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/79 (77%), Positives = 68/79 (86%)
Query: 63 MGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNT 122
MGKRQLMNLLLLGAVSLPT ML+PYA+FF PPG GSAGG T AKDAIGND+IA +WL
Sbjct: 1 MGKRQLMNLLLLGAVSLPTAIMLIPYASFFVPPGSGSAGGATIAKDAIGNDVIAEEWLKN 60
Query: 123 HGPGDRTLTEGLKQDFSHL 141
HGPGDRTLT+GLK D ++L
Sbjct: 61 HGPGDRTLTQGLKGDPTYL 79
>gi|30679426|ref|NP_849295.1| cytochrome b6-f complex iron-sulfur subunit [Arabidopsis thaliana]
gi|15294210|gb|AAK95282.1|AF410296_1 AT4g03280/F4C21_21 [Arabidopsis thaliana]
gi|20147273|gb|AAM10350.1| AT4g03280/F4C21_21 [Arabidopsis thaliana]
gi|332656902|gb|AEE82302.1| cytochrome b6-f complex iron-sulfur subunit [Arabidopsis thaliana]
Length = 210
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/118 (67%), Positives = 96/118 (81%), Gaps = 2/118 (1%)
Query: 26 SRAFLVKPAR--TQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGF 83
S VKP + QMV K +G++I CQA+SIPADRVPDM KR+ +NLLLLGA+SLPTG+
Sbjct: 4 SSGLFVKPTKMNHQMVRKEKIGLRISCQASSIPADRVPDMEKRKTLNLLLLGALSLPTGY 63
Query: 84 MLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
MLVPYATFF PPG G GGGT AKDA+GND++AA+WL THGPGDRTLT+GLK D ++L
Sbjct: 64 MLVPYATFFVPPGTGGGGGGTPAKDALGNDVVAAEWLKTHGPGDRTLTQGLKGDPTYL 121
>gi|116792831|gb|ABK26517.1| unknown [Picea sitchensis]
Length = 234
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/142 (52%), Positives = 94/142 (66%), Gaps = 3/142 (2%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPS---RAFLVKPARTQMVTKNPMGMKIKCQATSIPADR 59
S S+ ++ + SQ+ S G+F + AF+ + +K K CQA +I ADR
Sbjct: 5 SISTAATTSYSQISSCNNGIFAGTGQLLAFMPLKNHGRGRSKKKQAAKTICQAANIAADR 64
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDM KR+LMNLLLLGA+SLPT MLVPY +FF PPG G +G G AKDAIGNDI+A W
Sbjct: 65 VPDMEKRKLMNLLLLGAISLPTAGMLVPYGSFFVPPGSGGSGSGLIAKDAIGNDILATQW 124
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L TH PGD+TL +GLK D ++L
Sbjct: 125 LKTHPPGDKTLAQGLKGDPTYL 146
>gi|158935081|emb|CAM57108.1| Rieske iron-sulphur protein precursor [Pinellia ternata]
Length = 226
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/141 (58%), Positives = 101/141 (71%), Gaps = 3/141 (2%)
Query: 1 MASSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRV 60
MAS+ ++A PSQL S K +F PSR L K + + + G + C ATSI ADRV
Sbjct: 1 MASTPLSTAAAPSQLASGKNCVFAPSRGLLCKVPKGLGLGR---GERATCMATSISADRV 57
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
PDMGKRQLMNLLLLG +SLP+ ML+PYA FF PPG G GGG AKDA+GND++AA+WL
Sbjct: 58 PDMGKRQLMNLLLLGTLSLPSAGMLIPYAAFFVPPGTGGGGGGIVAKDALGNDVVAAEWL 117
Query: 121 NTHGPGDRTLTEGLKQDFSHL 141
THGP DRTLT+GLK D ++L
Sbjct: 118 KTHGPNDRTLTQGLKGDPTYL 138
>gi|116780057|gb|ABK21538.1| unknown [Picea sitchensis]
gi|116784503|gb|ABK23367.1| unknown [Picea sitchensis]
Length = 234
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 93/140 (66%), Gaps = 3/140 (2%)
Query: 5 SSLSSATPSQLCSSKGGMFC-PSRAFLVKPART--QMVTKNPMGMKIKCQATSIPADRVP 61
S+ ++ + SQ+ S G+F P + P + + +K K CQA +I ADRVP
Sbjct: 7 STAATTSYSQISSCNNGIFAGPGQLLAFMPLKNHGRGRSKKKQAAKTICQAANIAADRVP 66
Query: 62 DMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLN 121
DM KR+LMNLLLLGA+SLPT MLVPY +FF PPG G +G G AKDAIGNDI+A WL
Sbjct: 67 DMEKRKLMNLLLLGAISLPTAGMLVPYGSFFVPPGSGGSGSGLIAKDAIGNDILATQWLK 126
Query: 122 THGPGDRTLTEGLKQDFSHL 141
TH PGD+TL +GLK D ++L
Sbjct: 127 THPPGDKTLAQGLKGDPTYL 146
>gi|195612956|gb|ACG28308.1| cytochrome b6-f complex iron-sulfur subunit [Zea mays]
Length = 227
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/132 (54%), Positives = 90/132 (68%), Gaps = 6/132 (4%)
Query: 11 TPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQA-TSIPADRVPDMGKRQLM 69
P+QLC S+ + P + + R + ++ I CQA +SIPADRVPDM KR+LM
Sbjct: 12 NPTQLCRSRAALGKPVKGLGLGMGRERASQRS-----ITCQAASSIPADRVPDMEKRKLM 66
Query: 70 NLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRT 129
NLLLLGA+SLPT M+VPY FF P G G+ GGGT AKD +GNDI +WLNTHGP DRT
Sbjct: 67 NLLLLGAISLPTVGMVVPYGAFFVPAGSGNGGGGTYAKDKLGNDITVEEWLNTHGPNDRT 126
Query: 130 LTEGLKQDFSHL 141
L +GLK D ++L
Sbjct: 127 LAQGLKGDPTYL 138
>gi|226503077|ref|NP_001140947.1| cytochrome b6-f complex iron-sulfur subunit [Zea mays]
gi|194701894|gb|ACF85031.1| unknown [Zea mays]
gi|195650503|gb|ACG44719.1| cytochrome b6-f complex iron-sulfur subunit [Zea mays]
gi|413925986|gb|AFW65918.1| cytochrome b6-f complex iron-sulfur subunit [Zea mays]
Length = 227
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/132 (54%), Positives = 90/132 (68%), Gaps = 6/132 (4%)
Query: 11 TPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQA-TSIPADRVPDMGKRQLM 69
P+QLC S+ + P + + R + ++ I CQA +SIPADRVPDM KR+LM
Sbjct: 12 NPTQLCRSRAALGKPVKGLGLGMGRERASQRS-----ITCQAASSIPADRVPDMEKRKLM 66
Query: 70 NLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRT 129
NLLLLGA+SLPT M+VPY FF P G G+ GGGT AKD +GNDI +WLNTHGP DRT
Sbjct: 67 NLLLLGAISLPTVGMVVPYGAFFVPAGSGNGGGGTYAKDKLGNDITVEEWLNTHGPNDRT 126
Query: 130 LTEGLKQDFSHL 141
L +GLK D ++L
Sbjct: 127 LAQGLKGDPTYL 138
>gi|68566175|sp|Q69GY7.1|UCRIA_SOLTU RecName: Full=Cytochrome b6-f complex iron-sulfur subunit,
chloroplastic; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; AltName: Full=Rieske iron-sulfur
protein; Short=ISP; Short=RISP; Flags: Precursor
gi|37222949|gb|AAQ90151.1| putative Rieske Fe-S protein precursor [Solanum tuberosum]
Length = 230
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/144 (62%), Positives = 105/144 (72%), Gaps = 8/144 (5%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMG----MKIKCQATSIPAD 58
+SS+LS TPSQLCSSK G+ S+A LVKP + + + MG MK KC A SIPAD
Sbjct: 2 ASSTLSHVTPSQLCSSKSGVSSVSQALLVKPMK---INGHGMGKDKRMKAKCMAASIPAD 58
Query: 59 -RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAA 117
RVPDM KR LMNLLLLGA++LPTG MLVPYATFFAPPG G GT AKDA GND++
Sbjct: 59 DRVPDMEKRNLMNLLLLGALALPTGGMLVPYATFFAPPGSGGGSSGTIAKDANGNDVVVT 118
Query: 118 DWLNTHGPGDRTLTEGLKQDFSHL 141
+WL TH PG RTLT+GLK D ++L
Sbjct: 119 EWLKTHSPGTRTLTQGLKGDPTYL 142
>gi|326488307|dbj|BAJ93822.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 234
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 79/125 (63%), Gaps = 7/125 (5%)
Query: 1 MASSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRV 60
MAS++ +++ P+QLC ++ C KP + + + I C A SI ADRV
Sbjct: 1 MASTALSTASNPTQLCRTRASSLC-------KPVKGLGFGRERIPRNITCMAGSISADRV 53
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
PDM KR+LMNLLLLGA+SLPT MLVPY +F P G GS GG AKD +GNDI+ DWL
Sbjct: 54 PDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPAGSGSNAGGVAAKDKLGNDILVEDWL 113
Query: 121 NTHGP 125
THGP
Sbjct: 114 KTHGP 118
>gi|241865180|gb|ACS68668.1| cytochrome b6-f complex iron-sulfur subunit [Sonneratia alba]
gi|241865412|gb|ACS68738.1| cytochrome b6-f complex iron-sulfur subunit [Sonneratia alba]
Length = 156
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 66/79 (83%)
Query: 63 MGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNT 122
MGKRQLMNLLLLGA+SLPT MLVPYATFFAPPG GT AKDAIGND++AA+WL
Sbjct: 1 MGKRQLMNLLLLGAISLPTAGMLVPYATFFAPPGRRGGSDGTVAKDAIGNDVLAAEWLKD 60
Query: 123 HGPGDRTLTEGLKQDFSHL 141
HGPGDRTLT+GLK D ++L
Sbjct: 61 HGPGDRTLTQGLKGDPTYL 79
>gi|146454654|gb|ABQ41993.1| cytochrome B6-F complex iron sulfur subunit 2 [Sonneratia alba]
gi|156634018|gb|ABU91008.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634020|gb|ABU91009.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634022|gb|ABU91010.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634024|gb|ABU91011.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634026|gb|ABU91012.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634028|gb|ABU91013.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634030|gb|ABU91014.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634032|gb|ABU91015.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634034|gb|ABU91016.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634036|gb|ABU91017.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634038|gb|ABU91018.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634040|gb|ABU91019.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634042|gb|ABU91020.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634044|gb|ABU91021.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634046|gb|ABU91022.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634048|gb|ABU91023.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634050|gb|ABU91024.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634052|gb|ABU91025.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634054|gb|ABU91026.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634056|gb|ABU91027.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634058|gb|ABU91028.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634060|gb|ABU91029.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634062|gb|ABU91030.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634064|gb|ABU91031.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634066|gb|ABU91032.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634068|gb|ABU91033.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634070|gb|ABU91034.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634072|gb|ABU91035.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634074|gb|ABU91036.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634076|gb|ABU91037.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634078|gb|ABU91038.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634080|gb|ABU91039.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634082|gb|ABU91040.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634084|gb|ABU91041.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634086|gb|ABU91042.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634088|gb|ABU91043.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634090|gb|ABU91044.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634092|gb|ABU91045.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634094|gb|ABU91046.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634096|gb|ABU91047.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634098|gb|ABU91048.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634100|gb|ABU91049.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634102|gb|ABU91050.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634104|gb|ABU91051.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634106|gb|ABU91052.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634108|gb|ABU91053.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634110|gb|ABU91054.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634112|gb|ABU91055.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634114|gb|ABU91056.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634116|gb|ABU91057.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634118|gb|ABU91058.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634120|gb|ABU91059.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634122|gb|ABU91060.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634124|gb|ABU91061.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634126|gb|ABU91062.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634128|gb|ABU91063.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634130|gb|ABU91064.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634132|gb|ABU91065.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634134|gb|ABU91066.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634136|gb|ABU91067.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634138|gb|ABU91068.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634140|gb|ABU91069.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634142|gb|ABU91070.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634144|gb|ABU91071.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634146|gb|ABU91072.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634148|gb|ABU91073.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634150|gb|ABU91074.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634152|gb|ABU91075.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634154|gb|ABU91076.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634156|gb|ABU91077.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634158|gb|ABU91078.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634160|gb|ABU91079.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634162|gb|ABU91080.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634164|gb|ABU91081.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634166|gb|ABU91082.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634168|gb|ABU91083.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634170|gb|ABU91084.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634172|gb|ABU91085.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634174|gb|ABU91086.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634176|gb|ABU91087.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634178|gb|ABU91088.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634180|gb|ABU91089.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634182|gb|ABU91090.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634184|gb|ABU91091.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634186|gb|ABU91092.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634188|gb|ABU91093.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634190|gb|ABU91094.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634192|gb|ABU91095.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634194|gb|ABU91096.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634196|gb|ABU91097.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634198|gb|ABU91098.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634200|gb|ABU91099.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634202|gb|ABU91100.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634204|gb|ABU91101.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634206|gb|ABU91102.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634208|gb|ABU91103.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634210|gb|ABU91104.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634212|gb|ABU91105.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634214|gb|ABU91106.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634216|gb|ABU91107.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634218|gb|ABU91108.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634220|gb|ABU91109.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634222|gb|ABU91110.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634224|gb|ABU91111.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
Length = 156
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 66/79 (83%)
Query: 63 MGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNT 122
MGKRQLMNLLLLGA+SLPT MLVPYATFFAPPG GT AKDAIGND++AA+WL
Sbjct: 1 MGKRQLMNLLLLGAISLPTAGMLVPYATFFAPPGRRGGSDGTVAKDAIGNDVLAAEWLKD 60
Query: 123 HGPGDRTLTEGLKQDFSHL 141
HGPGDRTLT+GLK D ++L
Sbjct: 61 HGPGDRTLTQGLKGDPTYL 79
>gi|146454660|gb|ABQ41996.1| cytochrome B6-F complex iron sulfur subunit 2 [Sonneratia apetala]
gi|156634698|gb|ABU91348.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634700|gb|ABU91349.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634702|gb|ABU91350.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634704|gb|ABU91351.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634706|gb|ABU91352.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634708|gb|ABU91353.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634710|gb|ABU91354.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634712|gb|ABU91355.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634714|gb|ABU91356.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
gi|156634716|gb|ABU91357.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia alba]
Length = 156
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 66/79 (83%)
Query: 63 MGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNT 122
MGKRQLMNLLLLGA+SLPT ML+PYATFFAPPG GT AKDAIGND++AA+WL
Sbjct: 1 MGKRQLMNLLLLGAISLPTAGMLIPYATFFAPPGRRGGSDGTVAKDAIGNDVLAAEWLKD 60
Query: 123 HGPGDRTLTEGLKQDFSHL 141
HGPGDRTLT+GLK D ++L
Sbjct: 61 HGPGDRTLTQGLKGDPTYL 79
>gi|146454658|gb|ABQ41995.1| cytochrome B6-F complex iron sulfur subunit 2 [Sonneratia ovata]
gi|156634758|gb|ABU91378.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia ovata]
gi|156634760|gb|ABU91379.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia ovata]
gi|156634762|gb|ABU91380.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia ovata]
gi|156634764|gb|ABU91381.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia ovata]
gi|156634766|gb|ABU91382.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia ovata]
gi|156634768|gb|ABU91383.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia ovata]
gi|156634770|gb|ABU91384.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia ovata]
gi|156634772|gb|ABU91385.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia ovata]
gi|156634774|gb|ABU91386.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia ovata]
gi|156634776|gb|ABU91387.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia ovata]
gi|223469184|gb|ACM90076.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia ovata]
gi|223469186|gb|ACM90077.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia ovata]
gi|223469188|gb|ACM90078.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia ovata]
gi|223469190|gb|ACM90079.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia ovata]
Length = 156
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 66/79 (83%)
Query: 63 MGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNT 122
MGKRQLMNLLLLGA+SLPT ML+PYATFFAPPG GT AKDAIGND++AA+WL
Sbjct: 1 MGKRQLMNLLLLGAISLPTAGMLIPYATFFAPPGRRGGSDGTVAKDAIGNDVLAAEWLKD 60
Query: 123 HGPGDRTLTEGLKQDFSHL 141
HGPGDRTLT+GLK D ++L
Sbjct: 61 HGPGDRTLTQGLKGDPTYL 79
>gi|146454656|gb|ABQ41994.1| cytochrome B6-F complex iron sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634226|gb|ABU91112.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634228|gb|ABU91113.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634230|gb|ABU91114.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634232|gb|ABU91115.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634234|gb|ABU91116.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634236|gb|ABU91117.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634238|gb|ABU91118.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634240|gb|ABU91119.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634242|gb|ABU91120.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634244|gb|ABU91121.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634246|gb|ABU91122.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634248|gb|ABU91123.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634250|gb|ABU91124.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634252|gb|ABU91125.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634254|gb|ABU91126.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634256|gb|ABU91127.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634258|gb|ABU91128.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634260|gb|ABU91129.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634262|gb|ABU91130.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634264|gb|ABU91131.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634266|gb|ABU91132.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634268|gb|ABU91133.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634270|gb|ABU91134.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634272|gb|ABU91135.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634274|gb|ABU91136.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634276|gb|ABU91137.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634278|gb|ABU91138.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634280|gb|ABU91139.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634282|gb|ABU91140.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634284|gb|ABU91141.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634286|gb|ABU91142.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634288|gb|ABU91143.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634290|gb|ABU91144.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634292|gb|ABU91145.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634294|gb|ABU91146.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634296|gb|ABU91147.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634298|gb|ABU91148.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634300|gb|ABU91149.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634302|gb|ABU91150.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634304|gb|ABU91151.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634306|gb|ABU91152.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634308|gb|ABU91153.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634310|gb|ABU91154.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634312|gb|ABU91155.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634314|gb|ABU91156.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634316|gb|ABU91157.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634318|gb|ABU91158.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634320|gb|ABU91159.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634322|gb|ABU91160.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634324|gb|ABU91161.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634326|gb|ABU91162.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
gi|156634328|gb|ABU91163.1| cytochrome B6-F complex iron-sulfur subunit 2 [Sonneratia
caseolaris]
Length = 156
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 66/79 (83%)
Query: 63 MGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNT 122
MGKR+LMNLLLLGA+SLPT MLVPYATFFAPPG GT AKDAIGND++AA+WL
Sbjct: 1 MGKRELMNLLLLGAISLPTAGMLVPYATFFAPPGRRGGSDGTVAKDAIGNDVLAAEWLKD 60
Query: 123 HGPGDRTLTEGLKQDFSHL 141
HGPGDRTLT+GLK D ++L
Sbjct: 61 HGPGDRTLTQGLKGDPTYL 79
>gi|242090577|ref|XP_002441121.1| hypothetical protein SORBIDRAFT_09g020820 [Sorghum bicolor]
gi|241946406|gb|EES19551.1| hypothetical protein SORBIDRAFT_09g020820 [Sorghum bicolor]
Length = 226
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 83/121 (68%), Gaps = 2/121 (1%)
Query: 23 FCPSRAFLVKPAR-TQMVTKNPMGMKIKCQA-TSIPADRVPDMGKRQLMNLLLLGAVSLP 80
C SRA L KP + + I CQA +SIPADRVPDM KR+LMNLLLLGA+SLP
Sbjct: 17 LCRSRATLGKPVKGLGLGMGRERAQSITCQAASSIPADRVPDMEKRKLMNLLLLGAISLP 76
Query: 81 TGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKQDFSH 140
T M+VPY FF P G G AGGGT AKD +GNDI +WL THGP DRTL +GLK D ++
Sbjct: 77 TVGMVVPYGAFFVPAGSGGAGGGTYAKDKLGNDITVDEWLKTHGPNDRTLAQGLKGDPTY 136
Query: 141 L 141
L
Sbjct: 137 L 137
>gi|388564565|gb|AFK73386.1| cytochrome b6-f complex iron-sulfur subunit [Saccharum hybrid
cultivar ROC22]
Length = 192
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/95 (68%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 48 IKCQA-TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTA 106
I CQA +SIPADRVPDM KR+LMNLLLLGA+SLPT M+VPY FF P G G AGGGT A
Sbjct: 9 ITCQAVSSIPADRVPDMEKRKLMNLLLLGAISLPTVGMVVPYGAFFVPAGSGGAGGGTYA 68
Query: 107 KDAIGNDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
KD +GNDI +WL THGP DRTL +GLK D ++L
Sbjct: 69 KDKLGNDITVDEWLKTHGPNDRTLAQGLKGDPTYL 103
>gi|401249|sp|Q02585.1|UCRIB_TOBAC RecName: Full=Cytochrome b6-f complex iron-sulfur subunit 2,
chloroplastic; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein 2; AltName: Full=Rieske iron-sulfur
protein 2; Short=ISP 2; Short=RISP 2; Flags: Precursor
gi|19997|emb|CAA46809.1| Rieske FeS [Nicotiana tabacum]
Length = 228
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/144 (61%), Positives = 108/144 (75%), Gaps = 10/144 (6%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMG----MKIKCQATSIPAD 58
+SS+LS T QLCSSK G+ S+ L+KP + + + +G MK+KC ATSIPAD
Sbjct: 2 ASSTLSPVT--QLCSSKSGLSSVSQCLLLKPMK---INSHGLGKDKRMKVKCMATSIPAD 56
Query: 59 -RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAA 117
RVPDM KR LMNLLLLGA+SLPT MLVPYATFFAPPG G GGT AKDA+GND+IA+
Sbjct: 57 DRVPDMEKRNLMNLLLLGALSLPTAGMLVPYATFFAPPGSGGGSGGTPAKDALGNDVIAS 116
Query: 118 DWLNTHGPGDRTLTEGLKQDFSHL 141
+WL TH PG+RTLT+GLK D ++L
Sbjct: 117 EWLKTHPPGNRTLTQGLKGDPTYL 140
>gi|401247|sp|P30361.2|UCRIA_TOBAC RecName: Full=Cytochrome b6-f complex iron-sulfur subunit 1,
chloroplastic; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein 1; AltName: Full=Rieske iron-sulfur
protein 1; Short=ISP 1; Short=RISP 1; Flags: Precursor
gi|19995|emb|CAA46808.1| Rieske FeS [Nicotiana tabacum]
Length = 228
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/144 (61%), Positives = 106/144 (73%), Gaps = 10/144 (6%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMG----MKIKCQATSIPAD 58
+SS+LS T QLCSSK G+ S+ LVKP + + + +G MK+KC ATSIPAD
Sbjct: 2 ASSTLSPVT--QLCSSKSGLSSVSQCLLVKPMK---INSHGLGKDKRMKVKCMATSIPAD 56
Query: 59 -RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAA 117
RVPDM KR LMNLLLLGA+SLPT MLVPY TFF PPG G GGT AKDA+GND+IA+
Sbjct: 57 DRVPDMEKRNLMNLLLLGALSLPTAGMLVPYGTFFVPPGSGGGSGGTPAKDALGNDVIAS 116
Query: 118 DWLNTHGPGDRTLTEGLKQDFSHL 141
+WL TH PG+RTLT+GLK D ++L
Sbjct: 117 EWLKTHPPGNRTLTQGLKGDPTYL 140
>gi|89475526|gb|ABD73295.1| photosynthetic electron transfer-like protein [Panax ginseng]
Length = 184
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/96 (76%), Positives = 84/96 (87%)
Query: 46 MKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTT 105
MK+ CQA+SIPADRVPDM KR+LMNLLLLGA+SLP+ MLVPYA FF PPG G+ GGGTT
Sbjct: 1 MKVTCQASSIPADRVPDMEKRKLMNLLLLGALSLPSAGMLVPYANFFVPPGSGAGGGGTT 60
Query: 106 AKDAIGNDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
AKDA+GND+IA +WL THGPGDRTLTEGLK D ++L
Sbjct: 61 AKDALGNDVIATEWLKTHGPGDRTLTEGLKGDPTYL 96
>gi|19999|emb|CAA45705.1| Rieske Fe/S protein of cytochrome b6/f complex [Nicotiana tabacum]
Length = 228
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/144 (60%), Positives = 105/144 (72%), Gaps = 10/144 (6%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMG----MKIKCQATSIPAD 58
+SS+LS T QLCSSK G+ S+ LVKP + + + +G MK+KC ATSIPAD
Sbjct: 2 ASSTLSPVT--QLCSSKSGLSSVSQCLLVKPMK---INSHGLGKDKRMKVKCMATSIPAD 56
Query: 59 -RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAA 117
RVPDM KR LMNLLLLGA+SLPT MLV Y TFF PPG G GGT AKDA+GND+IA+
Sbjct: 57 DRVPDMEKRNLMNLLLLGALSLPTAGMLVSYGTFFVPPGSGGGSGGTPAKDALGNDVIAS 116
Query: 118 DWLNTHGPGDRTLTEGLKQDFSHL 141
+WL TH PG+RTLT+GLK D ++L
Sbjct: 117 EWLKTHPPGNRTLTQGLKGDPTYL 140
>gi|168012597|ref|XP_001758988.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689687|gb|EDQ76057.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 197
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 67/94 (71%)
Query: 48 IKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAK 107
+K QA + +RVPDMGKR LMNLLL GA+SLPT +L PY F PP G AG G TAK
Sbjct: 16 VKVQAAAAAPERVPDMGKRNLMNLLLAGAISLPTAGLLGPYLYFLVPPSSGGAGLGVTAK 75
Query: 108 DAIGNDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
DA+GNDI ++ WL TH GDRTL +GLK D ++L
Sbjct: 76 DALGNDITSSGWLKTHPAGDRTLAQGLKGDPTYL 109
>gi|225290|prf||1211255A Rieske FeS protein N term
Length = 96
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 77/90 (85%)
Query: 52 ATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIG 111
ATSIPAD VPDM KR+ +NLLLLGA+S PTG+ML+PYA+FF PPG G+ GGT AKDA+G
Sbjct: 1 ATSIPADNVPDMQKRETLNLLLLGALSSPTGYMLLPYASFFVPPGGGAGTGGTIAKDALG 60
Query: 112 NDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
ND+IAA+WL TH PGDRTLT+GLK D ++L
Sbjct: 61 NDVIAAEWLKTHAPGDRTLTQGLKGDPTYL 90
>gi|356515220|ref|XP_003526299.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome b6-f complex iron-sulfur
subunit, chloroplastic-like [Glycine max]
Length = 169
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 71/102 (69%), Gaps = 10/102 (9%)
Query: 45 GMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGG- 103
G++I CQATSIP +RV DMGK LMNLLLLGAVSLPT +PYA F+ P LGSA
Sbjct: 7 GVRITCQATSIPNNRVLDMGKIDLMNLLLLGAVSLPT---XIPYAYFYVP--LGSASIDP 61
Query: 104 ---TTAKDAIGNDIIAADWLNTHGPGDRT-LTEGLKQDFSHL 141
AIGND+IA WL THGPGDRT LT+GL +D ++L
Sbjct: 62 HQPIYNNHAIGNDVIAEKWLETHGPGDRTVLTQGLMRDPTYL 103
>gi|168033436|ref|XP_001769221.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679486|gb|EDQ65933.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 212
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 64/91 (70%)
Query: 51 QATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAI 110
QA + +RVPDMGKR LMNLLL GAVSLPT +L PY F PP G G G TAKDA+
Sbjct: 34 QAAAAAPERVPDMGKRNLMNLLLAGAVSLPTAGLLGPYLYFLVPPSSGGGGLGVTAKDAL 93
Query: 111 GNDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
GNDI ++ WL TH GDRTL +GLK D ++L
Sbjct: 94 GNDITSSGWLKTHPAGDRTLAQGLKGDPTYL 124
>gi|4586598|dbj|BAA76431.1| plastoquinol-plastocyanin reductase [Cicer arietinum]
Length = 159
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 66/77 (85%)
Query: 65 KRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHG 124
KR L+NLLLLGA+SLPT MLVPYATFFAPPG GSA GGT AKDAIGND+IA WL THG
Sbjct: 1 KRNLLNLLLLGALSLPTAGMLVPYATFFAPPGAGSATGGTVAKDAIGNDVIAEQWLKTHG 60
Query: 125 PGDRTLTEGLKQDFSHL 141
PGDRTLT+GLK D ++L
Sbjct: 61 PGDRTLTQGLKGDPTYL 77
>gi|443315294|ref|ZP_21044792.1| Rieske Fe-S protein [Leptolyngbya sp. PCC 6406]
gi|442785095|gb|ELR94937.1| Rieske Fe-S protein [Leptolyngbya sp. PCC 6406]
Length = 180
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 59/82 (71%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPD+G+RQ MNLL LGA S G ML P +F PP G+AGGG AKD++G D+IA+ +
Sbjct: 10 VPDLGRRQFMNLLTLGAASGAVGGMLYPVVRYFIPPSSGTAGGGLLAKDSLGKDVIASQF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L THGPG+R L +GLK D ++L
Sbjct: 70 LQTHGPGERVLVQGLKGDPTYL 91
>gi|384252267|gb|EIE25743.1| chloroplast cytochrome B6/F complex rieske iron-sulfur protein
[Coccomyxa subellipsoidea C-169]
Length = 217
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 59/94 (62%)
Query: 48 IKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAK 107
+ +A SI A+ VPDM KR MNLLLLGA SLP G+M + PP + GG AK
Sbjct: 36 VVTRAASIAAEDVPDMQKRTTMNLLLLGAASLPIGYMAFGFVALLVPPKIAGTAGGQIAK 95
Query: 108 DAIGNDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
DA GND+ + W++TH GD +L +GLK D ++L
Sbjct: 96 DAAGNDVKGSKWISTHKAGDHSLVQGLKGDATYL 129
>gi|427418421|ref|ZP_18908604.1| Rieske Fe-S protein [Leptolyngbya sp. PCC 7375]
gi|425761134|gb|EKV01987.1| Rieske Fe-S protein [Leptolyngbya sp. PCC 7375]
Length = 209
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 17/129 (13%)
Query: 13 SQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLL 72
+++C+ + ++ +R + + + QA+ P VPD+G+RQ MNLL
Sbjct: 8 TEICTGRCSLWIHTRIY---------------SLTVMAQASGNP--DVPDLGRRQFMNLL 50
Query: 73 LLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTE 132
GA + L P +F PP GSAGGG TAKD +GND++A +L THG GDR+L +
Sbjct: 51 TFGAATGTAVGALYPIVKYFLPPSSGSAGGGVTAKDELGNDVVATSYLETHGAGDRSLVQ 110
Query: 133 GLKQDFSHL 141
GLK D ++L
Sbjct: 111 GLKGDPTYL 119
>gi|428219285|ref|YP_007103750.1| Cytochrome b6-f complex iron-sulfur subunit [Pseudanabaena sp. PCC
7367]
gi|427991067|gb|AFY71322.1| Cytochrome b6-f complex iron-sulfur subunit [Pseudanabaena sp. PCC
7367]
Length = 179
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Query: 54 SIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGND 113
S+P+D VPDMG+RQ MNLL+ + L P +F PP GS GGGTTAKDA GND
Sbjct: 5 SVPSD-VPDMGRRQFMNLLMWSSAGATALGGLYPVVNYFVPPSSGSKGGGTTAKDAAGND 63
Query: 114 IIAADWLNTHGPGDRTLTEGLKQDFSHLQL 143
I+A D++ TH GDR+L +GLK D +++ +
Sbjct: 64 IVATDYVATHQAGDRSLAQGLKGDPTYIVI 93
>gi|302832283|ref|XP_002947706.1| Rieske iron-sulfur subunit of the cytochrome b6f complex,
chloroplast precursor [Volvox carteri f. nagariensis]
gi|11135341|sp|Q9SBN3.1|UCRIA_VOLCA RecName: Full=Cytochrome b6-f complex iron-sulfur subunit,
chloroplastic; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; AltName: Full=Rieske iron-sulfur
protein; Short=ISP; Short=RISP; Flags: Precursor
gi|5902590|gb|AAD55565.1|AF110783_1 rieske iron-sulfur protein precursor [Volvox carteri f.
nagariensis]
gi|300267054|gb|EFJ51239.1| Rieske iron-sulfur subunit of the cytochrome b6f complex,
chloroplast precursor [Volvox carteri f. nagariensis]
Length = 206
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 33 PARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFF 92
P + Q ++ + ++ A S VPDM KR +MNL+LLG SLP G + + Y FF
Sbjct: 12 PCKAQATRRSRVMSVVRAAAVS---SEVPDMNKRNIMNLILLGGASLPVGSLALGYGAFF 68
Query: 93 APPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
PP G GG AKDA+GNDI A WL TH GDR+L++GLK D ++L
Sbjct: 69 VPPSSGGGSGGQAAKDALGNDIKANAWLATHQKGDRSLSQGLKGDPTYL 117
>gi|303287630|ref|XP_003063104.1| cytochrome b6/f complex iron-sulfur subunit, chloroplast precursor
[Micromonas pusilla CCMP1545]
gi|226455740|gb|EEH53043.1| cytochrome b6/f complex iron-sulfur subunit, chloroplast precursor
[Micromonas pusilla CCMP1545]
Length = 219
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 73/134 (54%), Gaps = 6/134 (4%)
Query: 8 SSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQ 67
S PS L K + C R ++ T P S VPDMGKR
Sbjct: 3 SITAPSSLNIPKAKLGCNVRGL------SRKATAAPKATSRSVVRASGAVGEVPDMGKRN 56
Query: 68 LMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGD 127
+MNLLL+GA+ LP ++ +A FF PPG G GGG AKDA GND+ + WL TH PGD
Sbjct: 57 VMNLLLVGAIGLPATSLVGGFAYFFVPPGGGGGGGGQPAKDAQGNDVKKSAWLKTHLPGD 116
Query: 128 RTLTEGLKQDFSHL 141
RTLT+GLK D +++
Sbjct: 117 RTLTQGLKGDATYI 130
>gi|78185300|ref|YP_377735.1| cytochrome b6-f complex iron-sulfur subunit [Synechococcus sp.
CC9902]
gi|123581170|sp|Q3AWL7.1|UCRI_SYNS9 RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|78169594|gb|ABB26691.1| Twin-arginine translocation pathway signal [Synechococcus sp.
CC9902]
Length = 178
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 58/89 (65%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T IP+ VP MG+RQ MNLL G+V+ L P A +F PP +GGGTTAKD +GN
Sbjct: 2 TQIPSSDVPGMGRRQFMNLLTFGSVTGVALGALYPVARYFIPPKAAGSGGGTTAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
+ A WL+TH GDR+L +GLK D ++L
Sbjct: 62 VVTATGWLSTHPEGDRSLVQGLKGDPTYL 90
>gi|148241803|ref|YP_001226960.1| cytochrome b6-f complex iron-sulfur subunit [Synechococcus sp.
RCC307]
gi|166201505|sp|A5GRU8.1|UCRI_SYNR3 RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|147850113|emb|CAK27607.1| Cytochrome B6-F complex iron-sulfur subunit [Synechococcus sp.
RCC307]
Length = 178
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 56/89 (62%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T I A VP MG+RQ MNLL G+V+ L P +F PP AGGGTTAKD +GN
Sbjct: 2 TQISAKDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPKASGAGGGTTAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
D+ A+ WL H GDR+L +GLK D ++L
Sbjct: 62 DVTASGWLADHKEGDRSLVQGLKGDPTYL 90
>gi|428316995|ref|YP_007114877.1| Cytochrome b6-f complex iron-sulfur subunit [Oscillatoria
nigro-viridis PCC 7112]
gi|428240675|gb|AFZ06461.1| Cytochrome b6-f complex iron-sulfur subunit [Oscillatoria
nigro-viridis PCC 7112]
Length = 180
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 55/82 (67%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ L P +F PP G+ GGG TAKDA+GNDII + +
Sbjct: 11 VPDMGRRQFMNLLTFGTVTGVALGALYPVVQYFVPPSSGAVGGGVTAKDALGNDIIVSKY 70
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L +H GDRTL +GLK D ++L
Sbjct: 71 LASHPAGDRTLAQGLKGDPTYL 92
>gi|6440852|dbj|BAA78591.1| hypothetical protein [Chlamydomonas sp. HS-5]
Length = 153
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 53/79 (67%)
Query: 63 MGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNT 122
M KR +MNLLL G ++LP G + VPYA FF P G GGG AKDA+GND+ +W+ T
Sbjct: 1 MNKRNIMNLLLAGGIALPVGGLAVPYALFFVPASSGGDGGGINAKDALGNDVKLTEWMKT 60
Query: 123 HGPGDRTLTEGLKQDFSHL 141
H GD +L +GLK D ++L
Sbjct: 61 HPSGDHSLVQGLKGDPTYL 79
>gi|145341891|ref|XP_001416036.1| Rieske iron-sulfur protein of cytochrome b6f [Ostreococcus
lucimarinus CCE9901]
gi|144576259|gb|ABO94328.1| Rieske iron-sulfur protein of cytochrome b6f [Ostreococcus
lucimarinus CCE9901]
Length = 216
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 51 QATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAI 110
+A S AD VPDM KR +MNLLL+GA+ LP ++ YA FF PP G G G AKDA
Sbjct: 37 RAASASAD-VPDMTKRSVMNLLLVGAIGLPATSLIGGYAYFFVPPSAGGGGAGQPAKDAN 95
Query: 111 GNDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
GNDI +WL TH PGD +LT+GLK D ++L
Sbjct: 96 GNDIKKGEWLKTHLPGDYSLTQGLKGDATYL 126
>gi|334116837|ref|ZP_08490929.1| Cytochrome b6-f complex iron-sulfur subunit [Microcoleus vaginatus
FGP-2]
gi|333461657|gb|EGK90262.1| Cytochrome b6-f complex iron-sulfur subunit [Microcoleus vaginatus
FGP-2]
Length = 180
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 56/82 (68%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ L P +F PP G+ GGG TAKDA+GNDII +++
Sbjct: 11 VPDMGRRQFMNLLTFGTVTGVALGALYPVVQYFVPPASGAVGGGVTAKDALGNDIIVSEY 70
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L +H GDR+L +GLK D +++
Sbjct: 71 LASHPAGDRSLAQGLKGDPTYV 92
>gi|74272703|gb|ABA01147.1| chloroplast cytochrome B6/F complex rieske iron-sulfur protein
[Chlamydomonas incerta]
Length = 178
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 56/83 (67%)
Query: 59 RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAAD 118
VPDM KR +MNL+L G LP G + + Y FF PP G GGG AKDA+GNDI +
Sbjct: 7 EVPDMNKRNIMNLILAGGAGLPIGTLALGYGAFFVPPSAGGGGGGQAAKDALGNDIKVGE 66
Query: 119 WLNTHGPGDRTLTEGLKQDFSHL 141
WL TH PGDR+L++GLK D ++L
Sbjct: 67 WLKTHLPGDRSLSQGLKGDPTYL 89
>gi|87302100|ref|ZP_01084925.1| Twin-arginine translocation pathway signal [Synechococcus sp. WH
5701]
gi|87283025|gb|EAQ74981.1| Twin-arginine translocation pathway signal [Synechococcus sp. WH
5701]
Length = 178
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 55/89 (61%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T IP VP MG+RQ MNLL G V+ L P A +F PP +GGG TAKD +GN
Sbjct: 2 TQIPVSDVPGMGRRQFMNLLTFGTVTGVALGALYPVARYFIPPKAAGSGGGITAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
+ A WL+TH GDR+L +GLK D ++L
Sbjct: 62 TVTATGWLSTHKEGDRSLVQGLKGDPTYL 90
>gi|302759841|ref|XP_002963343.1| hypothetical protein SELMODRAFT_166088 [Selaginella moellendorffii]
gi|300168611|gb|EFJ35214.1| hypothetical protein SELMODRAFT_166088 [Selaginella moellendorffii]
Length = 226
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 73/95 (76%), Gaps = 1/95 (1%)
Query: 47 KIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTA 106
K CQA S+PA+ VPDMGKRQL+N LLLGA+SLPT +L PY FF PPG G +G G A
Sbjct: 45 KTVCQAASVPAN-VPDMGKRQLLNTLLLGALSLPTVGILGPYLYFFVPPGSGGSGTGLVA 103
Query: 107 KDAIGNDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
KDAIGNDI+ +WL +H PGDRTL++GLK D ++L
Sbjct: 104 KDAIGNDILVTEWLASHPPGDRTLSQGLKGDPTYL 138
>gi|302785720|ref|XP_002974631.1| hypothetical protein SELMODRAFT_174399 [Selaginella moellendorffii]
gi|300157526|gb|EFJ24151.1| hypothetical protein SELMODRAFT_174399 [Selaginella moellendorffii]
Length = 226
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 73/95 (76%), Gaps = 1/95 (1%)
Query: 47 KIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTA 106
K CQA S+PA+ VPDMGKRQL+N LLLGA+SLPT +L PY FF PPG G +G G A
Sbjct: 45 KTVCQAASVPAN-VPDMGKRQLLNTLLLGALSLPTVGILGPYLYFFVPPGSGGSGTGLVA 103
Query: 107 KDAIGNDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
KDAIGNDI+ +WL +H PGDRTL++GLK D ++L
Sbjct: 104 KDAIGNDILVTEWLASHPPGDRTLSQGLKGDPTYL 138
>gi|255089997|ref|XP_002506920.1| cytochrome b6/f complex iron-sulfur subunit, chloroplast precursor
[Micromonas sp. RCC299]
gi|226522193|gb|ACO68178.1| cytochrome b6/f complex iron-sulfur subunit, chloroplast precursor
[Micromonas sp. RCC299]
Length = 206
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 57/83 (68%)
Query: 59 RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAAD 118
VPDMGKR +MNLLL+GA+ LP ++ YA FF PP G G G AKD GND+ + +
Sbjct: 35 EVPDMGKRNVMNLLLVGAIGLPATSLVGGYAYFFVPPSAGGGGAGQPAKDKNGNDVKSKE 94
Query: 119 WLNTHGPGDRTLTEGLKQDFSHL 141
WL TH GDRTL++GLK D +++
Sbjct: 95 WLKTHLAGDRTLSQGLKGDATYI 117
>gi|68566162|sp|Q5CC93.1|UCRIA_CYAPA RecName: Full=Cytochrome b6-f complex iron-sulfur subunit 1,
cyanelle; AltName: Full=Plastohydroquinone:plastocyanin
oxidoreductase iron-sulfur protein 1; AltName:
Full=Rieske iron-sulfur protein 1; Short=ISP 1;
Short=RISP 1; Flags: Precursor
gi|60677361|emb|CAH04960.1| Rieske iron-sulphur protein [Cyanophora paradoxa]
Length = 239
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 4/95 (4%)
Query: 48 IKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPP-GLGSAGGGTTA 106
+ C A S D VPDMGKR+LMNLLLLGA++ P P+ +F PP G AG G A
Sbjct: 59 VSCSAAS---DDVPDMGKRKLMNLLLLGAIAGPVAGAGGPFVSFLVPPKAGGGAGAGQAA 115
Query: 107 KDAIGNDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
KDA+GND+ + WL TH PGDR+L +GLK D ++L
Sbjct: 116 KDALGNDVKVSSWLETHKPGDRSLAQGLKGDATYL 150
>gi|148240186|ref|YP_001225573.1| cytochrome b6-f complex iron-sulfur subunit [Synechococcus sp. WH
7803]
gi|156633659|sp|A5GMW1.1|UCRI_SYNPW RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|147848725|emb|CAK24276.1| Cytochrome B6-F complex iron-sulfur subunit [Synechococcus sp. WH
7803]
Length = 178
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 58/89 (65%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T +PA VP MG+RQ MNLL G+V+ L P +F PP +GGGT+AKD +GN
Sbjct: 2 TQMPAGDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPRAAGSGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
+ A+ WL+TH GDR+L +GLK D ++L
Sbjct: 62 AVTASGWLSTHPAGDRSLVQGLKGDPTYL 90
>gi|449016737|dbj|BAM80139.1| cytochrome b6/f complex iron-sulfur subunit precursor
[Cyanidioschyzon merolae strain 10D]
Length = 237
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 54/84 (64%)
Query: 58 DRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAA 117
D +PDMGKR L+NL+L+G+V LP ML YA+FF PP GG AKDA+G I
Sbjct: 65 DYIPDMGKRTLLNLILVGSVGLPASIMLGTYASFFVPPLKNKGSGGVIAKDALGTPIKKE 124
Query: 118 DWLNTHGPGDRTLTEGLKQDFSHL 141
D+L TH PG R L +GL + ++L
Sbjct: 125 DYLKTHPPGSRDLVQGLNGEPTYL 148
>gi|159481438|ref|XP_001698786.1| rieske iron-sulfur subunit of the cytochrome b6f complex,
chloroplast precursor [Chlamydomonas reinhardtii]
gi|1717956|sp|P49728.1|UCRIA_CHLRE RecName: Full=Cytochrome b6-f complex iron-sulfur subunit,
chloroplastic; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; AltName: Full=Rieske iron-sulfur
protein; Short=ISP; Short=RISP; Flags: Precursor
gi|510968|emb|CAA53947.1| rieske iron-sulfur protein of cytochrome B6/F complex
[Chlamydomonas reinhardtii]
gi|2381483|dbj|BAA22147.1| chloroplast Rieske Fe-S precursor protein [Chlamydomonas
reinhardtii]
gi|158273497|gb|EDO99286.1| rieske iron-sulfur subunit of the cytochrome b6f complex,
chloroplast precursor [Chlamydomonas reinhardtii]
Length = 206
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 67/112 (59%), Gaps = 3/112 (2%)
Query: 30 LVKPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYA 89
+ PA+ + ++ + ++ A S VPDM KR +MNL+L G LP + + Y
Sbjct: 9 VAAPAKASAIRRSRVMPVVRAAAAS---SEVPDMNKRNIMNLILAGGAGLPITTLALGYG 65
Query: 90 TFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
FF PP G GGG AKDA+GNDI A +WL TH GDR+L++GLK D ++L
Sbjct: 66 AFFVPPSSGGGGGGQAAKDALGNDIKAGEWLKTHLAGDRSLSQGLKGDPTYL 117
>gi|449018664|dbj|BAM82066.1| cytochrome b6/f complex iron-sulfur subunit precursor
[Cyanidioschyzon merolae strain 10D]
Length = 240
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 54/82 (65%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
+PDMGKR L+NL+LLG+V LP ML YA++F PP + GG AKDA+G I ++
Sbjct: 70 IPDMGKRTLLNLILLGSVGLPASIMLSTYASYFMPPSKNKSSGGAIAKDALGTPIKKEEY 129
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L TH PG R L +GL + ++L
Sbjct: 130 LKTHPPGSRDLVQGLNGEPTYL 151
>gi|428165086|gb|EKX34091.1| plastid Reiske Fe-s protein [Guillardia theta CCMP2712]
Length = 228
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 57/82 (69%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQLMN LLLG+VS P + ++ P G GGGT AKDA+GND+ +W
Sbjct: 58 VPDMGRRQLMNALLLGSVSGPLLVLPAVLISYLVPAKAGGGGGGTVAKDALGNDVKIENW 117
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L THGPGDR+L +GLK D ++L
Sbjct: 118 LKTHGPGDRSLVQGLKGDATYL 139
>gi|428214558|ref|YP_007087702.1| Rieske Fe-S protein [Oscillatoria acuminata PCC 6304]
gi|428002939|gb|AFY83782.1| Rieske Fe-S protein [Oscillatoria acuminata PCC 6304]
Length = 179
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 51 QATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAI 110
QA+ P VP MG+RQ MNLL GAV+ L P +F PP G+AGGG TAKDA+
Sbjct: 3 QASGNP--DVPSMGRRQFMNLLTFGAVTGTALGALYPVVKYFIPPSSGAAGGGVTAKDAL 60
Query: 111 GNDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
GND+ + +L +H GDR L +GLK D ++L
Sbjct: 61 GNDVSVSQFLGSHNAGDRVLAQGLKGDPTYL 91
>gi|88770640|gb|ABD51923.1| chloroplast cytochrome b6 [Guillardia theta]
Length = 196
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 57/82 (69%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQLMN LLLG+VS P + ++ P G GGGT AKDA+GND+ +W
Sbjct: 26 VPDMGRRQLMNALLLGSVSGPLLVLPAVLISYLVPAKAGGGGGGTVAKDALGNDVKIENW 85
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L THGPGDR+L +GLK D ++L
Sbjct: 86 LKTHGPGDRSLVQGLKGDATYL 107
>gi|409990111|ref|ZP_11273537.1| cytochrome b6-f complex iron-sulfur subunit [Arthrospira platensis
str. Paraca]
gi|291570076|dbj|BAI92348.1| cytochrome b6-f complex iron-sulfur subunit [Arthrospira platensis
NIES-39]
gi|409939022|gb|EKN80260.1| cytochrome b6-f complex iron-sulfur subunit [Arthrospira platensis
str. Paraca]
Length = 179
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Query: 53 TSIPADR-VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIG 111
T I A+ VP MG+RQ MNLL G+ + L P+ +F PP G AGGG AKDA+G
Sbjct: 2 TQISANSDVPSMGRRQFMNLLTFGSATGVALGALYPFVKYFIPPSTGGAGGGVIAKDALG 61
Query: 112 NDIIAADWLNTHGPGDRTLTEGLKQDFSHLQL 143
ND++A+ ++ TH GDR L +GLK D ++L +
Sbjct: 62 NDVVASQFVATHNVGDRVLAQGLKGDPTYLVI 93
>gi|78212178|ref|YP_380957.1| cytochrome b6-f complex iron-sulfur subunit [Synechococcus sp.
CC9605]
gi|123770795|sp|Q3ALY0.1|UCRI_SYNSC RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|78196637|gb|ABB34402.1| Twin-arginine translocation pathway signal [Synechococcus sp.
CC9605]
Length = 178
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + + VP MG+RQ MNLL G+V+ L P A +F PP +GGGT+AKD +GN
Sbjct: 2 TQLSSSDVPGMGRRQFMNLLTFGSVTGVALGALYPVANYFIPPKAAGSGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
I A+ WL++H GDR+L +GLK D ++L
Sbjct: 62 PITASGWLSSHPEGDRSLVQGLKGDPTYL 90
>gi|260435442|ref|ZP_05789412.1| cytochrome b6-F complex iron-sulfur subunit [Synechococcus sp. WH
8109]
gi|260413316|gb|EEX06612.1| cytochrome b6-F complex iron-sulfur subunit [Synechococcus sp. WH
8109]
Length = 178
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + + VP MG+RQ MNLL G+V+ L P A +F PP +GGGT+AKD +GN
Sbjct: 2 TQLSSSDVPGMGRRQFMNLLTFGSVTGVALGALYPVANYFIPPKAAGSGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
I A+ WL++H GDR+L +GLK D ++L
Sbjct: 62 PITASGWLSSHPEGDRSLVQGLKGDPTYL 90
>gi|449018045|dbj|BAM81447.1| cytochrome b6/f complex iron-sulfur subunit precursor
[Cyanidioschyzon merolae strain 10D]
Length = 240
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 54/82 (65%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
+PDMGKR L++L+LLG+V LP ML YA++F PP + GG AKDA+G I ++
Sbjct: 70 IPDMGKRTLLSLILLGSVGLPASIMLSTYASYFMPPSKNKSSGGVIAKDALGTPIKKEEY 129
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L TH PG R L +GL + ++L
Sbjct: 130 LKTHPPGSRDLVQGLNGEPTYL 151
>gi|209524158|ref|ZP_03272709.1| Cytochrome b6-f complex Fe-S subunit [Arthrospira maxima CS-328]
gi|376003978|ref|ZP_09781770.1| Cytochrome b6-f complex iron-sulfur subunit 1 (Rieske iron-sulfur
protein 1) (Plastohydroquinone:plastocyanin
oxidoreductase iron-sulfur protein 1) (ISP 1) (RISP 1)
[Arthrospira sp. PCC 8005]
gi|423066095|ref|ZP_17054885.1| cytochrome b6-f complex Fe-S subunit [Arthrospira platensis C1]
gi|209495533|gb|EDZ95837.1| Cytochrome b6-f complex Fe-S subunit [Arthrospira maxima CS-328]
gi|375327648|emb|CCE17523.1| Cytochrome b6-f complex iron-sulfur subunit 1 (Rieske iron-sulfur
protein 1) (Plastohydroquinone:plastocyanin
oxidoreductase iron-sulfur protein 1) (ISP 1) (RISP 1)
[Arthrospira sp. PCC 8005]
gi|406712434|gb|EKD07620.1| cytochrome b6-f complex Fe-S subunit [Arthrospira platensis C1]
Length = 179
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 53 TSIPADR-VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIG 111
T I A+ VP MG+RQ MNLL G+ + L P+ +F PP G AGGG AKDA+G
Sbjct: 2 TQISANSDVPSMGRRQFMNLLTFGSATGVALGALYPFVKYFIPPSTGGAGGGVIAKDALG 61
Query: 112 NDIIAADWLNTHGPGDRTLTEGLKQDFSHLQL 143
ND++ + ++ TH GDR L +GLK D ++L +
Sbjct: 62 NDVVVSQFVATHNVGDRVLAQGLKGDPTYLVI 93
>gi|428297848|ref|YP_007136154.1| Cytochrome b6-f complex iron-sulfur subunit [Calothrix sp. PCC
6303]
gi|428234392|gb|AFZ00182.1| Cytochrome b6-f complex iron-sulfur subunit [Calothrix sp. PCC
6303]
Length = 179
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 53/82 (64%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ L P +F PP G+ GGG AKDA+GND+ + +
Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPASGTGGGGAIAKDALGNDVSVSQF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L++H GDR L +GLK D +++
Sbjct: 70 LDSHNVGDRVLVQGLKGDPTYI 91
>gi|22298502|ref|NP_681749.1| cytochrome b6-f complex iron-sulfur subunit [Thermosynechococcus
elongatus BP-1]
gi|223635804|sp|P0C8N7.1|UCRI_SYNEL RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|223635805|sp|P0C8N8.1|UCRI_THEEB RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|5420313|emb|CAB46649.1| Rieske iron-sulfur protein [Synechococcus elongatus]
gi|22294682|dbj|BAC08511.1| cytochrome b6-f complex iron-sulfur subunit [Thermosynechococcus
elongatus BP-1]
Length = 180
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 53/82 (64%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G ++ L P +F PP G GGG AKDA+GNDI +++
Sbjct: 10 VPDMGRRQFMNLLTFGTITGTALGALYPVVKYFIPPASGGTGGGAVAKDALGNDIKVSEY 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L H PGDR+L +G+K D +++
Sbjct: 70 LAKHLPGDRSLAQGIKGDPTYV 91
>gi|119491405|ref|ZP_01623424.1| cytochrome b6-f complex iron-sulfur subunit [Lyngbya sp. PCC 8106]
gi|119453400|gb|EAW34563.1| cytochrome b6-f complex iron-sulfur subunit [Lyngbya sp. PCC 8106]
Length = 179
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%)
Query: 59 RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAAD 118
VPDMG+RQ MNLL G+ + +L P+ +F P G AGGG TAKDA+GNDIIA++
Sbjct: 9 EVPDMGRRQFMNLLTFGSATGVALGVLYPFVKYFVPASSGGAGGGVTAKDALGNDIIASE 68
Query: 119 WLNTHGPGDRTLTEGLKQDFSHL 141
+L H PGDRTL +GLK D ++L
Sbjct: 69 FLANHNPGDRTLAQGLKGDPTYL 91
>gi|298706644|emb|CBJ29582.1| Cytochrome b6-f complex iron-sulfur subunit [Ectocarpus
siliculosus]
Length = 224
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 55/82 (67%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDM +R MNL+L G++ + + VPY FF PPG G +GGG TAKDAIGN++ W
Sbjct: 56 VPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGGGGSGGGVTAKDAIGNEVTVESW 115
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L THG G R L EG+K D ++L
Sbjct: 116 LATHGVGSRELAEGIKGDATYL 137
>gi|443313438|ref|ZP_21043049.1| Rieske Fe-S protein [Synechocystis sp. PCC 7509]
gi|442776381|gb|ELR86663.1| Rieske Fe-S protein [Synechocystis sp. PCC 7509]
Length = 179
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 51/82 (62%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VP+MG+RQ MNLL G V+ L P FF PP G A GGTTAKDA+GND + +
Sbjct: 10 VPNMGRRQFMNLLAFGTVTGTAAGALYPVVKFFIPPSSGGATGGTTAKDALGNDFSVSKF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L GDRTL +GLK D +++
Sbjct: 70 LENRSAGDRTLAQGLKGDPTYI 91
>gi|194477202|ref|YP_002049381.1| plastoquinol--plastocyanin reductase [Paulinella chromatophora]
gi|171192209|gb|ACB43171.1| plastoquinol--plastocyanin reductase [Paulinella chromatophora]
Length = 178
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 54/89 (60%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T I + VP MG+RQ MNLL G+V+ L P A +F PP +GGG TAKD +GN
Sbjct: 2 TQISSSDVPGMGRRQFMNLLTFGSVTGVALGGLYPVANYFIPPRAAGSGGGITAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
+ A WL+TH G R L +GLK D ++L
Sbjct: 62 TVTATGWLSTHKGGSRNLVQGLKGDPTYL 90
>gi|124022374|ref|YP_001016681.1| cytochrome b6-f complex iron-sulfur subunit [Prochlorococcus
marinus str. MIT 9303]
gi|68566135|sp|Q7V654.2|UCRI_PROMM RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|156633656|sp|A2C7F6.1|UCRI_PROM3 RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|123962660|gb|ABM77416.1| Rieske iron-sulfur protein [Prochlorococcus marinus str. MIT 9303]
Length = 178
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 55/89 (61%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + + VP MG+RQ MNLL G+V+ L P +F PP +GGGT+AKD +GN
Sbjct: 2 TQMTSSDVPGMGRRQFMNLLTFGSVTGVALGSLYPVVKYFIPPRASGSGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
+ A+ WL H GDR+L +GLK D ++L
Sbjct: 62 SVTASGWLANHSDGDRSLVQGLKGDPTYL 90
>gi|113953877|ref|YP_731350.1| cytochrome b6-f complex iron-sulfur subunit [Synechococcus sp.
CC9311]
gi|122945581|sp|Q0I872.1|UCRI_SYNS3 RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|113881228|gb|ABI46186.1| cytochrome b6-f complex, iron-sulfur subunit [Synechococcus sp.
CC9311]
Length = 178
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 58/89 (65%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T +PA VP MG+RQ MNLL G+V+ L P A +F PP GGGT+AKD +GN
Sbjct: 2 TQMPASDVPGMGRRQFMNLLTFGSVTGVALGALYPVANYFIPPRAAGGGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
+ A+ WL++H GDR+L +GLK D ++L
Sbjct: 62 SVTASGWLSSHAEGDRSLVQGLKGDPTYL 90
>gi|218245623|ref|YP_002370994.1| cytochrome b6-f complex iron-sulfur subunit [Cyanothece sp. PCC
8801]
gi|257058667|ref|YP_003136555.1| cytochrome b6-f complex iron-sulfur subunit [Cyanothece sp. PCC
8802]
gi|218166101|gb|ACK64838.1| cyclic nucleotide-binding protein [Cyanothece sp. PCC 8801]
gi|256588833|gb|ACU99719.1| cyclic nucleotide-binding protein [Cyanothece sp. PCC 8802]
Length = 180
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 56/82 (68%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G ++ L P +F PP G AGGG TAKDA+GND+I +++
Sbjct: 10 VPDMGRRQFMNLLTFGTITGVAAGALYPVVKYFIPPSSGGAGGGVTAKDALGNDVIVSEF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L +H PGDR L +GLK D ++L
Sbjct: 70 LGSHNPGDRVLAQGLKGDPTYL 91
>gi|425440831|ref|ZP_18821126.1| Cytochrome b6-f complex iron-sulfur subunit [Microcystis aeruginosa
PCC 9717]
gi|425446374|ref|ZP_18826379.1| Cytochrome b6-f complex iron-sulfur subunit [Microcystis aeruginosa
PCC 9443]
gi|425466854|ref|ZP_18846148.1| Cytochrome b6-f complex iron-sulfur subunit [Microcystis aeruginosa
PCC 9809]
gi|440755571|ref|ZP_20934773.1| cytochrome b6-f complex iron-sulfur subunit 1 [Microcystis
aeruginosa TAIHU98]
gi|443663356|ref|ZP_21133120.1| cytochrome b6-f complex iron-sulfur subunit 1 [Microcystis
aeruginosa DIANCHI905]
gi|159028756|emb|CAO89927.1| petC [Microcystis aeruginosa PCC 7806]
gi|389718656|emb|CCH97429.1| Cytochrome b6-f complex iron-sulfur subunit [Microcystis aeruginosa
PCC 9717]
gi|389733432|emb|CCI02809.1| Cytochrome b6-f complex iron-sulfur subunit [Microcystis aeruginosa
PCC 9443]
gi|389830531|emb|CCI27448.1| Cytochrome b6-f complex iron-sulfur subunit [Microcystis aeruginosa
PCC 9809]
gi|440175777|gb|ELP55146.1| cytochrome b6-f complex iron-sulfur subunit 1 [Microcystis
aeruginosa TAIHU98]
gi|443331929|gb|ELS46566.1| cytochrome b6-f complex iron-sulfur subunit 1 [Microcystis
aeruginosa DIANCHI905]
Length = 179
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 55/82 (67%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPD+G+RQ MNLL G ++ L P +F PP G GGG TAKDA+GND+I + +
Sbjct: 9 VPDLGRRQFMNLLTFGTITGVAAGALYPIVKYFIPPSAGGTGGGVTAKDALGNDVIVSQF 68
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L +H PGDRTL +GLK D ++L
Sbjct: 69 LGSHNPGDRTLAQGLKGDPTYL 90
>gi|452822027|gb|EME29050.1| cytochrome b6-f complex iron-sulfur subunit [Galdieria sulphuraria]
Length = 230
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 10/140 (7%)
Query: 6 SLSSATPSQLC----SSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVP 61
++++ T SQ C + K +F + L + R+ +G+++ A+S D+VP
Sbjct: 8 TIAATTSSQHCYVGMNRKSTLFSHNNRRLKRECRS-----CNLGLEMTGSASS-SVDQVP 61
Query: 62 DMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLN 121
DM KR +N +LLG SLP ML YA FF PP G +G GT A+D +G +I ++L
Sbjct: 62 DMSKRMFLNYVLLGGASLPILTMLGSYAYFFYPPSRGGSGAGTIARDVLGREIKKKEFLE 121
Query: 122 THGPGDRTLTEGLKQDFSHL 141
T PG L +G K D +L
Sbjct: 122 TRKPGTHELAQGPKGDPHYL 141
>gi|427704441|ref|YP_007047663.1| Rieske Fe-S protein [Cyanobium gracile PCC 6307]
gi|427347609|gb|AFY30322.1| Rieske Fe-S protein [Cyanobium gracile PCC 6307]
Length = 186
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 51/82 (62%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VP MG+RQ MNLL G+V+ L P +F PP +GGG TAKD +GN + A W
Sbjct: 17 VPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPKAAGSGGGVTAKDELGNSVTATGW 76
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L +H GDR+L +GLK D ++L
Sbjct: 77 LASHKEGDRSLVQGLKGDPTYL 98
>gi|218440863|ref|YP_002379192.1| cytochrome b6-f complex iron-sulfur subunit [Cyanothece sp. PCC
7424]
gi|218173591|gb|ACK72324.1| Cytochrome b6-f complex Fe-S subunit [Cyanothece sp. PCC 7424]
Length = 180
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 55/82 (67%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G ++ L P +F PP G GGG TAKDA+GNDI+ +D+
Sbjct: 10 VPDMGRRQFMNLLTFGTITGIAAGALYPVVKYFIPPSSGGTGGGLTAKDALGNDILVSDF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L TH GDRTL +GLK D +++
Sbjct: 70 LATHNAGDRTLAQGLKGDPTYI 91
>gi|1695185|emb|CAA70823.1| Rieske iron-sulfur protein [Phormidium laminosum]
Length = 177
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 55/82 (67%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPD+G RQ MNLL GA + ML P +F PP G AGGG TAKDA+GND++ D+
Sbjct: 7 VPDLGARQFMNLLTFGAATGTVLGMLYPVVRYFIPPSSGGAGGGVTAKDALGNDVVLKDF 66
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L TH PG+R L EGLK D ++L
Sbjct: 67 LATHTPGERVLAEGLKGDPTYL 88
>gi|352094873|ref|ZP_08956044.1| Cytochrome b6-f complex iron-sulfur subunit [Synechococcus sp. WH
8016]
gi|351681213|gb|EHA64345.1| Cytochrome b6-f complex iron-sulfur subunit [Synechococcus sp. WH
8016]
Length = 178
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T +PA VP MG+RQ MNLL G+V+ L P A +F PP GGGT+AKD +GN
Sbjct: 2 TQMPASDVPGMGRRQFMNLLTFGSVTGVALGALYPVANYFIPPRAAGGGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
+ A+ WL+ H GDR+L +GLK D ++L
Sbjct: 62 AVTASGWLSGHAEGDRSLVQGLKGDPTYL 90
>gi|172037871|ref|YP_001804372.1| cytochrome b6-f complex iron-sulfur subunit [Cyanothece sp. ATCC
51142]
gi|354556356|ref|ZP_08975652.1| cyclic nucleotide-binding protein [Cyanothece sp. ATCC 51472]
gi|171699325|gb|ACB52306.1| cytochrome b6-f complex Rieske iron-sulfur subunit,
plastoquinol--plastocyanin reductase [Cyanothece sp.
ATCC 51142]
gi|353551793|gb|EHC21193.1| cyclic nucleotide-binding protein [Cyanothece sp. ATCC 51472]
Length = 180
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 56/82 (68%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G ++ L P +F PP G AGGG TAKDA+GNDI+A+++
Sbjct: 10 VPDMGRRQFMNLLTFGTITGVAAGALYPVVKYFIPPSSGGAGGGITAKDALGNDIMASNF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L TH GDR L +GLK D ++L
Sbjct: 70 LATHNGGDRVLAQGLKGDPTYL 91
>gi|307150176|ref|YP_003885560.1| cytochrome b6-f complex Fe-S subunit [Cyanothece sp. PCC 7822]
gi|306980404|gb|ADN12285.1| Cytochrome b6-f complex Fe-S subunit [Cyanothece sp. PCC 7822]
Length = 180
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 57/82 (69%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G ++ L P +F PP G AGGG TAKDA+GNDII +++
Sbjct: 10 VPDMGRRQFMNLLTFGTITGIAAGALYPVVKYFIPPSSGGAGGGLTAKDALGNDIIVSEY 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L+TH G+R+L +GLK D +++
Sbjct: 70 LSTHKEGERSLAQGLKGDPTYI 91
>gi|254416151|ref|ZP_05029906.1| Cytochrome B6-F complex Fe-S subunit family [Coleofasciculus
chthonoplastes PCC 7420]
gi|196177084|gb|EDX72093.1| Cytochrome B6-F complex Fe-S subunit family [Coleofasciculus
chthonoplastes PCC 7420]
Length = 180
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 57/82 (69%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G ++ L P +F PP G AGGG TAKDA+GNDI +++
Sbjct: 10 VPDMGRRQFMNLLTFGTITGTFVGALYPIVKYFIPPSSGGAGGGVTAKDALGNDIQVSEF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L++H PGDRTL +GLK D +++
Sbjct: 70 LSSHNPGDRTLAQGLKGDPTYV 91
>gi|166364663|ref|YP_001656936.1| cytochrome b6-f complex iron-sulfur subunit [Microcystis aeruginosa
NIES-843]
gi|390442123|ref|ZP_10230141.1| Cytochrome b6-f complex iron-sulfur subunit [Microcystis sp. T1-4]
gi|422302362|ref|ZP_16389725.1| Cytochrome b6-f complex iron-sulfur subunit [Microcystis aeruginosa
PCC 9806]
gi|425472764|ref|ZP_18851605.1| Cytochrome b6-f complex iron-sulfur subunit [Microcystis aeruginosa
PCC 9701]
gi|226725576|sp|B0JXB7.1|UCRI_MICAN RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|166087036|dbj|BAG01744.1| cytochrome b6-f complex iron-sulfur subunit [Microcystis aeruginosa
NIES-843]
gi|389788436|emb|CCI15890.1| Cytochrome b6-f complex iron-sulfur subunit [Microcystis aeruginosa
PCC 9806]
gi|389834567|emb|CCI34267.1| Cytochrome b6-f complex iron-sulfur subunit [Microcystis sp. T1-4]
gi|389881076|emb|CCI38340.1| Cytochrome b6-f complex iron-sulfur subunit [Microcystis aeruginosa
PCC 9701]
Length = 179
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPD+G+RQ MNLL G ++ L P +F PP G GGG TAKDA+GND+I + +
Sbjct: 9 VPDLGRRQFMNLLTFGTITGVAAGALYPIVKYFIPPSAGGTGGGVTAKDALGNDVIVSQF 68
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L +H GDRTL +GLK D ++L
Sbjct: 69 LTSHNAGDRTLAQGLKGDPTYL 90
>gi|434397691|ref|YP_007131695.1| Cytochrome b6-f complex iron-sulfur subunit [Stanieria cyanosphaera
PCC 7437]
gi|428268788|gb|AFZ34729.1| Cytochrome b6-f complex iron-sulfur subunit [Stanieria cyanosphaera
PCC 7437]
Length = 180
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 56/82 (68%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G+++ L P +F PP G AGGG TAKDA+GNDII + +
Sbjct: 10 VPDMGRRQFMNLLTFGSITGVALGALYPVVKYFIPPSSGGAGGGLTAKDALGNDIIVSQY 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L H PGDR+L +GLK D +++
Sbjct: 70 LAEHNPGDRSLAQGLKGDPTYI 91
>gi|425457364|ref|ZP_18837070.1| Cytochrome b6-f complex iron-sulfur subunit [Microcystis aeruginosa
PCC 9807]
gi|389801320|emb|CCI19519.1| Cytochrome b6-f complex iron-sulfur subunit [Microcystis aeruginosa
PCC 9807]
Length = 179
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPD+G+RQ MNLL G ++ L P +F PP G GGG TAKDA+GND+I + +
Sbjct: 9 VPDLGRRQFMNLLTFGTITGVAAGALYPIVKYFIPPSAGGTGGGVTAKDALGNDVIVSQF 68
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L +H GDRTL +GLK D ++L
Sbjct: 69 LGSHNAGDRTLAQGLKGDPTYL 90
>gi|428204608|ref|YP_007083197.1| Rieske Fe-S protein [Pleurocapsa sp. PCC 7327]
gi|427982040|gb|AFY79640.1| Rieske Fe-S protein [Pleurocapsa sp. PCC 7327]
Length = 179
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 57/85 (67%)
Query: 57 ADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIA 116
A VPDMG+RQ MNLL G ++ L P +F PP G GGG TAKDA+GNDII
Sbjct: 7 ASDVPDMGRRQFMNLLTFGTITGVAAGALYPVVKYFIPPSSGGVGGGVTAKDALGNDIIV 66
Query: 117 ADWLNTHGPGDRTLTEGLKQDFSHL 141
+++L TH PGDRTL +GLK D +++
Sbjct: 67 SEFLATHNPGDRTLAQGLKGDPTYI 91
>gi|158337569|ref|YP_001518744.1| cytochrome b6-f complex iron-sulfur subunit [Acaryochloris marina
MBIC11017]
gi|158307810|gb|ABW29427.1| cytochrome b6f complex Rieske iron-sulfur subunit PetC
[Acaryochloris marina MBIC11017]
Length = 179
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 56/82 (68%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL GA++ L P +F PP G +GGG AKDA+GND++ +++
Sbjct: 10 VPDMGRRQFMNLLTFGAITGTALGGLYPVVRYFIPPSSGGSGGGLNAKDALGNDVVVSEF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L H PGDRTLT+G K D +++
Sbjct: 70 LAEHSPGDRTLTQGFKGDPTYV 91
>gi|126657470|ref|ZP_01728626.1| plastoquinol--plastocyanin reductase [Cyanothece sp. CCY0110]
gi|126621174|gb|EAZ91887.1| plastoquinol--plastocyanin reductase [Cyanothece sp. CCY0110]
Length = 180
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 55/82 (67%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G ++ L P +F PP G AGGG TAKDA+GNDI+A+++
Sbjct: 10 VPDMGRRQFMNLLTFGTITGVAAGALYPVVKYFIPPSSGGAGGGITAKDALGNDIMASNF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L H GDR L +GLK D ++L
Sbjct: 70 LANHNAGDRVLAQGLKGDPTYL 91
>gi|428307227|ref|YP_007144052.1| Cytochrome b6-f complex iron-sulfur subunit [Crinalium epipsammum
PCC 9333]
gi|428248762|gb|AFZ14542.1| Cytochrome b6-f complex iron-sulfur subunit [Crinalium epipsammum
PCC 9333]
Length = 180
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 55/82 (67%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL GAV+ L P +F PP GS GGG TAKDA+GNDII + +
Sbjct: 10 VPDMGRRQFMNLLTFGAVTGTALGALYPVVQYFIPPSSGSGGGGVTAKDALGNDIIVSKF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L H GDRTL +GLK D +++
Sbjct: 70 LADHKSGDRTLAQGLKGDPTYV 91
>gi|284929028|ref|YP_003421550.1| cytochrome b6-f complex iron-sulfur subunit PetC1 (Rieske iron
sulfur protein ) [cyanobacterium UCYN-A]
gi|284809487|gb|ADB95192.1| Cytochrome b6-f complex iron-sulfur subunit PetC1 (Rieske iron
sulfur protein ) [cyanobacterium UCYN-A]
Length = 180
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G ++ L P +F PP G +GGG AKDA+GNDI+A ++
Sbjct: 10 VPDMGRRQFMNLLTFGTITGVAAGALYPVVKYFVPPSSGGSGGGIVAKDALGNDIVATEF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHLQL 143
+++H GDR L++GLK D ++L +
Sbjct: 70 ISSHKVGDRVLSQGLKGDPTYLVI 93
>gi|359460963|ref|ZP_09249526.1| cytochrome b6-f complex iron-sulfur subunit [Acaryochloris sp.
CCMEE 5410]
Length = 179
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 55/82 (67%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL GA++ L P +F PP G GGG AKDA+GND++ +++
Sbjct: 10 VPDMGRRQFMNLLTFGAITGTALGGLYPVVRYFIPPSSGGTGGGLNAKDALGNDVVVSEF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L H PGDRTLT+G K D +++
Sbjct: 70 LAEHSPGDRTLTQGFKGDPTYV 91
>gi|332709308|ref|ZP_08429270.1| Rieske Fe-S protein [Moorea producens 3L]
gi|332351854|gb|EGJ31432.1| Rieske Fe-S protein [Moorea producens 3L]
Length = 180
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 57/82 (69%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G ++ L P +F PP G AGGG TAKDA+GNDI+ +++
Sbjct: 10 VPDMGRRQFMNLLAFGTITGTFVGALYPIVKYFIPPSSGGAGGGVTAKDALGNDIMVSEF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L +H GDRTLT+GLK D +++
Sbjct: 70 LASHNVGDRTLTQGLKGDPTYV 91
>gi|67925035|ref|ZP_00518417.1| Plastoquinol--plastocyanin reductase [Crocosphaera watsonii WH
8501]
gi|67853129|gb|EAM48506.1| Plastoquinol--plastocyanin reductase [Crocosphaera watsonii WH
8501]
Length = 149
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G ++ L P +F PP G AGGG AKDA+GND+IA+++
Sbjct: 10 VPDMGRRQFMNLLTFGTITGVAAGALYPVVKYFIPPSSGGAGGGVNAKDALGNDVIASNF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L H GDR L +GL+ D ++L
Sbjct: 70 LAEHNVGDRVLAQGLQGDPTYL 91
>gi|33863589|ref|NP_895149.1| cytochrome b6-f complex iron-sulfur subunit [Prochlorococcus
marinus str. MIT 9313]
gi|33635172|emb|CAE21497.1| Rieske iron-sulfur protein [Prochlorococcus marinus str. MIT 9313]
Length = 167
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%)
Query: 63 MGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNT 122
MG+RQ MNLL G+V+ L P +F PP +GGGT+AKD +GN + A+ WL
Sbjct: 1 MGRRQFMNLLTFGSVTGVALGSLYPVVKYFIPPRASGSGGGTSAKDELGNSVTASGWLAN 60
Query: 123 HGPGDRTLTEGLKQDFSHL 141
H GDR+L +GLK D ++L
Sbjct: 61 HSDGDRSLVQGLKGDPTYL 79
>gi|88807601|ref|ZP_01123113.1| Cytochrome b6/f complex subunit (Rieske iron-sulfur protein)
[Synechococcus sp. WH 7805]
gi|88788815|gb|EAR19970.1| Cytochrome b6/f complex subunit (Rieske iron-sulfur protein)
[Synechococcus sp. WH 7805]
Length = 178
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 57/89 (64%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T +PA VP MG+RQ MNLL G+V+ L P +F PP GGGT+AKD +GN
Sbjct: 2 TQMPAGDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPRAAGGGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
+ A+ WL++H GDR+L +GLK D ++L
Sbjct: 62 AVTASGWLSSHPAGDRSLVQGLKGDPTYL 90
>gi|416407061|ref|ZP_11688239.1| Cytochrome b6-f complex iron-sulfur subunit PetC1 (Rieske iron
sulfur protein) [Crocosphaera watsonii WH 0003]
gi|357260927|gb|EHJ10252.1| Cytochrome b6-f complex iron-sulfur subunit PetC1 (Rieske iron
sulfur protein) [Crocosphaera watsonii WH 0003]
Length = 180
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 54/82 (65%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G ++ L P +F PP G AGGG AKDA+GND+IA+++
Sbjct: 10 VPDMGRRQFMNLLTFGTITGVAAGALYPVVKYFIPPSSGGAGGGVNAKDALGNDVIASNF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L H GDR L +GLK D ++L
Sbjct: 70 LAEHNVGDRVLAQGLKGDPTYL 91
>gi|425437076|ref|ZP_18817504.1| Cytochrome b6-f complex iron-sulfur subunit [Microcystis aeruginosa
PCC 9432]
gi|425449298|ref|ZP_18829139.1| Cytochrome b6-f complex iron-sulfur subunit [Microcystis aeruginosa
PCC 7941]
gi|389678001|emb|CCH93089.1| Cytochrome b6-f complex iron-sulfur subunit [Microcystis aeruginosa
PCC 9432]
gi|389764092|emb|CCI09517.1| Cytochrome b6-f complex iron-sulfur subunit [Microcystis aeruginosa
PCC 7941]
Length = 179
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 53/82 (64%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPD+G+RQ MNLL G ++ L P +F PP G GGG TAKDA+GND+I + +
Sbjct: 9 VPDLGRRQFMNLLTFGTITGVAAGALYPIVKYFIPPSAGGTGGGVTAKDALGNDVIVSQF 68
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L H GDRTL +GLK D ++L
Sbjct: 69 LAGHNAGDRTLAQGLKGDPTYL 90
>gi|428778413|ref|YP_007170199.1| Rieske Fe-S protein [Dactylococcopsis salina PCC 8305]
gi|428692692|gb|AFZ48842.1| Rieske Fe-S protein [Dactylococcopsis salina PCC 8305]
Length = 198
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%)
Query: 59 RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAAD 118
P MG+RQ MNLL G+++ L P +F PP AG G TAKD +GNDI+A++
Sbjct: 27 EAPGMGRRQFMNLLTFGSITGVALGALYPVVRYFIPPSSSGAGAGVTAKDELGNDILASE 86
Query: 119 WLNTHGPGDRTLTEGLKQDFSHL 141
+L H GDR L +GLK D +++
Sbjct: 87 FLGKHPAGDRALAQGLKGDPTYV 109
>gi|425462736|ref|ZP_18842203.1| Cytochrome b6-f complex iron-sulfur subunit [Microcystis aeruginosa
PCC 9808]
gi|389824136|emb|CCI27122.1| Cytochrome b6-f complex iron-sulfur subunit [Microcystis aeruginosa
PCC 9808]
Length = 179
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 54/82 (65%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VP++G+RQ MNLL G ++ L P +F PP G GGG TAKDA+GND+I + +
Sbjct: 9 VPNLGRRQFMNLLTFGTITGVAAGALYPIVKYFIPPSAGGTGGGVTAKDALGNDVIVSQF 68
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L +H GDRTL +GLK D ++L
Sbjct: 69 LGSHNAGDRTLAQGLKGDPTYL 90
>gi|307108591|gb|EFN56831.1| hypothetical protein CHLNCDRAFT_57522 [Chlorella variabilis]
Length = 167
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 53/79 (67%)
Query: 63 MGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNT 122
M KR LMN LL+GA+ P + P+A FF PP G GGGT AKDA+G D+ A+ WL T
Sbjct: 1 MEKRVLMNWLLVGAIGAPAVGLAGPFAVFFVPPSKGGGGGGTVAKDALGADVKASAWLKT 60
Query: 123 HGPGDRTLTEGLKQDFSHL 141
H GDR+L +GLK D ++L
Sbjct: 61 HPVGDRSLVQGLKADATYL 79
>gi|443329054|ref|ZP_21057644.1| Rieske Fe-S protein [Xenococcus sp. PCC 7305]
gi|442791329|gb|ELS00826.1| Rieske Fe-S protein [Xenococcus sp. PCC 7305]
Length = 179
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 57/84 (67%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPD+G+RQ MNLL G+++ L P +F PP G GGG TA+DA+GNDII +++
Sbjct: 10 VPDLGRRQFMNLLTFGSITGVALGALYPVVKYFIPPSSGGEGGGITAQDALGNDIIVSEY 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHLQL 143
L H PGDRTL +GLK D +++ +
Sbjct: 70 LVDHPPGDRTLAQGLKGDPTYVVI 93
>gi|219121191|ref|XP_002185824.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582673|gb|ACI65294.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 178
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 54/80 (67%)
Query: 62 DMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLN 121
D +R LMNLL++GA ++ G +PY FF PPG G+ GG AKDA+GNDI+A +L+
Sbjct: 10 DDERRFLMNLLMVGAGAVTVGGFGIPYILFFVPPGSGTGAGGIPAKDALGNDIMAKAYLD 69
Query: 122 THGPGDRTLTEGLKQDFSHL 141
+ DR+L +GLK D ++L
Sbjct: 70 SKPVNDRSLAQGLKGDATYL 89
>gi|68566161|sp|Q5CC92.1|UCRIB_CYAPA RecName: Full=Cytochrome b6-f complex iron-sulfur subunit 2,
cyanelle; AltName: Full=Plastohydroquinone:plastocyanin
oxidoreductase iron-sulfur protein 2; AltName:
Full=Rieske iron-sulfur protein 2; Short=ISP 2;
Short=RISP 2; Flags: Precursor
gi|60677363|emb|CAH04961.1| Rieske iron-sulphur protein [Cyanophora paradoxa]
Length = 241
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 61/95 (64%), Gaps = 4/95 (4%)
Query: 48 IKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPP-GLGSAGGGTTA 106
I C A S D VPDMGKR+LMNLLLLGA++ PT P+ +F PP G AG G A
Sbjct: 61 ISCSAAS---DEVPDMGKRKLMNLLLLGAIAGPTIGAGGPFVSFLVPPKSGGGAGAGQAA 117
Query: 107 KDAIGNDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
KDA GNDI WL T PGDR+L +GLK D ++L
Sbjct: 118 KDAAGNDIKVEKWLETXKPGDRSLAQGLKGDATYL 152
>gi|443319882|ref|ZP_21049029.1| Rieske Fe-S protein [Gloeocapsa sp. PCC 73106]
gi|442790395|gb|ELR99981.1| Rieske Fe-S protein [Gloeocapsa sp. PCC 73106]
Length = 180
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%)
Query: 57 ADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIA 116
A PDMG+RQ MNLL G V+ L P +F PP G GGG AKDA+GND+I
Sbjct: 7 ASDAPDMGRRQFMNLLTFGTVTGVALGALYPVVKYFIPPSSGGTGGGVIAKDALGNDVIV 66
Query: 117 ADWLNTHGPGDRTLTEGLKQDFSHLQL 143
+ ++ TH GDR L +GLK D ++L L
Sbjct: 67 SQFIATHSAGDRVLAQGLKGDPTYLVL 93
>gi|116073459|ref|ZP_01470721.1| Twin-arginine translocation pathway signal [Synechococcus sp.
RS9916]
gi|116068764|gb|EAU74516.1| Twin-arginine translocation pathway signal [Synechococcus sp.
RS9916]
Length = 178
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 56/89 (62%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + VP MG+RQ MNLL G+V+ L P A +F PP GGGT+AKD +GN
Sbjct: 2 TQASSSDVPGMGRRQFMNLLTFGSVTGVALGALYPVANYFIPPRAAGGGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
+ A+ WL++H GDR+L +GLK D ++L
Sbjct: 62 AVTASGWLSSHPAGDRSLVQGLKGDPTYL 90
>gi|428224095|ref|YP_007108192.1| Cytochrome b6-f complex Fe-S subunit [Geitlerinema sp. PCC 7407]
gi|427983996|gb|AFY65140.1| Cytochrome b6-f complex Fe-S subunit [Geitlerinema sp. PCC 7407]
Length = 180
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 54/82 (65%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VP MG+RQ MN L GAV+ L P +F PP G GGG TAKDA+GNDI+ +++
Sbjct: 10 VPSMGRRQFMNFLTFGAVTGTALGALYPVVKYFIPPSSGGGGGGVTAKDALGNDIVVSNF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L+TH G+R L +GLK D +++
Sbjct: 70 LSTHNAGERVLAQGLKGDPTYV 91
>gi|113475470|ref|YP_721531.1| cytochrome b6-f complex iron-sulfur subunit [Trichodesmium
erythraeum IMS101]
gi|123160970|sp|Q114L6.1|UCRI_TRIEI RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|110166518|gb|ABG51058.1| Rieske (2Fe-2S) region [Trichodesmium erythraeum IMS101]
Length = 179
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Query: 51 QATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAI 110
QA P VP MG+RQ MNLL G V+ L P +F PP G +GGG TAKDA+
Sbjct: 3 QAEGTP--DVPSMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPSSGGSGGGVTAKDAL 60
Query: 111 GNDIIAADWLNTHGPGDRTLTEGLKQDFSHLQL 143
GNDII +++L H G+RTL +GLK D +++ +
Sbjct: 61 GNDIIVSEFLANHNSGERTLAQGLKGDPTYVVI 93
>gi|223995629|ref|XP_002287488.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976604|gb|EED94931.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 212
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 54/80 (67%)
Query: 62 DMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLN 121
D +R LMNL+L+G+ ++ G + VPY FF PPG G GGT AKDA+GN+I A ++L
Sbjct: 44 DQNRRNLMNLILVGSAAVTVGGLAVPYILFFVPPGAGGGEGGTPAKDALGNEIFAKEYLA 103
Query: 122 THGPGDRTLTEGLKQDFSHL 141
T GD +L +GLK D ++L
Sbjct: 104 TKKAGDHSLAQGLKGDATYL 123
>gi|411119165|ref|ZP_11391545.1| Rieske Fe-S protein [Oscillatoriales cyanobacterium JSC-12]
gi|410711028|gb|EKQ68535.1| Rieske Fe-S protein [Oscillatoriales cyanobacterium JSC-12]
Length = 179
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 52/82 (63%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL++G + ML P +F PP G GG TAKDA+GNDI D+
Sbjct: 10 VPDMGRRQFMNLLMVGTGAGTVLGMLYPVINYFIPPSTGGGSGGVTAKDALGNDIGVTDF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L +H GD L +GLK D +++
Sbjct: 70 LASHNAGDHVLAQGLKGDPTYI 91
>gi|170078514|ref|YP_001735152.1| cytochrome b6-f complex iron-sulfur subunit [Synechococcus sp. PCC
7002]
gi|136713|sp|P26292.1|UCRI_SYNP2 RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|142186|gb|AAA22069.1| Reiske iron-sulfur protein [Synechococcus sp. PCC 7002]
gi|169886183|gb|ACA99896.1| Rieske FeS protein [Synechococcus sp. PCC 7002]
gi|444316|prf||1906365A Rieske FeS protein
Length = 180
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 55/82 (67%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPD+G+RQ +NLL +G + L P +F PP G AGGG AKDA+GNDII +D+
Sbjct: 10 VPDLGRRQFLNLLWVGTAAGTALGGLYPVIKYFIPPSSGGAGGGVIAKDALGNDIIVSDY 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L TH GDR+L +GLK D +++
Sbjct: 70 LQTHTAGDRSLAQGLKGDPTYV 91
>gi|428223258|ref|YP_007107428.1| Rieske Fe-S protein [Synechococcus sp. PCC 7502]
gi|427996598|gb|AFY75293.1| Rieske Fe-S protein [Synechococcus sp. PCC 7502]
Length = 178
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VP MG+RQ MN+LL GAV L P +F PP G +GGG TAKDA+G DIIA+ +
Sbjct: 9 VPSMGRRQFMNVLLGGAVGTTVLGALYPVVQYFVPPSSGGSGGGVTAKDALGKDIIASQF 68
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L++H GD L +GLK D +++
Sbjct: 69 LDSHQVGDHVLAQGLKGDPTYI 90
>gi|428771024|ref|YP_007162814.1| Cytochrome b6-f complex iron-sulfur subunit [Cyanobacterium
aponinum PCC 10605]
gi|428685303|gb|AFZ54770.1| Cytochrome b6-f complex iron-sulfur subunit [Cyanobacterium
aponinum PCC 10605]
Length = 179
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G ++ L P ++F P G G G AKD +GND++A+++
Sbjct: 10 VPDMGRRQFMNLLTFGTITGVAAGALYPVVSYFIPKSAGGTGAGIAAKDKLGNDVVASEF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L +H GDRTL +GLK D ++L
Sbjct: 70 LASHQAGDRTLAQGLKGDPTYL 91
>gi|224014706|ref|XP_002297015.1| cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor
[Thalassiosira pseudonana CCMP1335]
gi|220968395|gb|EED86743.1| cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor
[Thalassiosira pseudonana CCMP1335]
Length = 181
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%)
Query: 52 ATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIG 111
AT ++ D +R LMN +L+G+ ++ G + PY FF PP G T AKDAIG
Sbjct: 3 ATGDGSEYYIDQNRRNLMNSILVGSAAVTVGGLAGPYLAFFVPPSDDGGSGTTIAKDAIG 62
Query: 112 NDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
N+I A ++L + PGD +L +GLK D ++L
Sbjct: 63 NEIFAKEYLASKKPGDHSLAQGLKGDPTYL 92
>gi|56750327|ref|YP_171028.1| cytochrome b6-f complex iron-sulfur subunit [Synechococcus
elongatus PCC 6301]
gi|81300041|ref|YP_400249.1| cytochrome b6-f complex iron-sulfur subunit [Synechococcus
elongatus PCC 7942]
gi|68566125|sp|Q5N5B0.1|UCRI_SYNP6 RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|123556934|sp|Q31NV7.1|UCRI_SYNE7 RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|56685286|dbj|BAD78508.1| cytochrome b6-f complex iron-sulfur subunit [Synechococcus
elongatus PCC 6301]
gi|81168922|gb|ABB57262.1| cytochrome b6-f complex iron-sulfur subunit [Synechococcus
elongatus PCC 7942]
Length = 179
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 54/85 (63%)
Query: 57 ADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIA 116
A VP MG+RQ MNLL G+V+ L P +F PP G +GGG AKDA+GND++
Sbjct: 7 ASDVPSMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPSSGGSGGGVAAKDALGNDVVL 66
Query: 117 ADWLNTHGPGDRTLTEGLKQDFSHL 141
+ +L H GDRTL +GLK D ++L
Sbjct: 67 SKFLADHNVGDRTLVQGLKGDPTYL 91
>gi|427725261|ref|YP_007072538.1| Cytochrome b6-f complex iron-sulfur subunit [Leptolyngbya sp. PCC
7376]
gi|427356981|gb|AFY39704.1| Cytochrome b6-f complex iron-sulfur subunit [Leptolyngbya sp. PCC
7376]
Length = 179
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 55/84 (65%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPD+G+R +NLL +G + L P +F PP G GGG AKDA+GNDII +++
Sbjct: 10 VPDLGRRNFLNLLWVGTAAGTALGGLYPVIKYFIPPSSGGGGGGVIAKDALGNDIIVSEY 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHLQL 143
L THG GDR+L +GLK D +++ +
Sbjct: 70 LTTHGAGDRSLAQGLKGDPTYIVI 93
>gi|300867330|ref|ZP_07111988.1| Cytochrome b6-f complex iron-sulfur subunit [Oscillatoria sp. PCC
6506]
gi|300334684|emb|CBN57154.1| Cytochrome b6-f complex iron-sulfur subunit [Oscillatoria sp. PCC
6506]
Length = 180
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 51/82 (62%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ L P +F PP G GGG TAKD +GNDI+ + +
Sbjct: 11 VPDMGRRQFMNLLTFGTVTGVALGALYPVVKYFIPPSSGGTGGGLTAKDKLGNDIVVSKF 70
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L H GDR L +GLK D +++
Sbjct: 71 LAEHAVGDRVLAQGLKGDPTYI 92
>gi|428773765|ref|YP_007165553.1| Cytochrome b6-f complex Fe-S subunit [Cyanobacterium stanieri PCC
7202]
gi|428688044|gb|AFZ47904.1| Cytochrome b6-f complex Fe-S subunit [Cyanobacterium stanieri PCC
7202]
Length = 179
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Query: 53 TSIPADR-VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIG 111
T IPA+ VPDMG+RQ MNLL G ++ L P ++F P G AGGG TAKD +G
Sbjct: 2 TQIPANSDVPDMGRRQFMNLLTFGTITGIAAGALYPVVSYFIPKSAGGAGGGITAKDKLG 61
Query: 112 NDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
ND+ A+++ PGDR+L +GLK D +++
Sbjct: 62 NDLSASEFTANRQPGDRSLAQGLKGDPTYI 91
>gi|443475558|ref|ZP_21065503.1| Cytochrome b6-f complex iron-sulfur subunit [Pseudanabaena biceps
PCC 7429]
gi|443019566|gb|ELS33635.1| Cytochrome b6-f complex iron-sulfur subunit [Pseudanabaena biceps
PCC 7429]
Length = 179
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 55/82 (67%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VP MG+RQ MNL+L G+ ++ + P A +F PP G AGGG AKDA+GND+IA+ +
Sbjct: 10 VPSMGRRQFMNLILGGSAAVTALGAIYPVAAYFVPPSRGGAGGGVAAKDALGNDVIASKF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L H GDR L +GLK D +++
Sbjct: 70 LADHQAGDRVLAQGLKGDPTYI 91
>gi|440680466|ref|YP_007155261.1| Cytochrome b6-f complex iron-sulfur subunit [Anabaena cylindrica
PCC 7122]
gi|428677585|gb|AFZ56351.1| Cytochrome b6-f complex iron-sulfur subunit [Anabaena cylindrica
PCC 7122]
Length = 179
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 51/82 (62%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ L P +F PP G GGGT AK+ +GND+ +
Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPASGGGGGGTVAKNELGNDVSVGQF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L +H GDRTL +GLK D +++
Sbjct: 70 LESHNVGDRTLVQGLKGDPTYI 91
>gi|72383630|ref|YP_292985.1| cytochrome b6-f complex iron-sulfur subunit [Prochlorococcus
marinus str. NATL2A]
gi|124025228|ref|YP_001014344.1| cytochrome b6-f complex iron-sulfur subunit [Prochlorococcus
marinus str. NATL1A]
gi|123620323|sp|Q46GW1.1|UCRI_PROMT RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|156633655|sp|A2C0R9.1|UCRI_PROM1 RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|72003480|gb|AAZ59282.1| cytochrome b6/f complex subunit (rieske iron-sulfur protein)
[Prochlorococcus marinus str. NATL2A]
gi|123960296|gb|ABM75079.1| Rieske iron-sulfur protein [Prochlorococcus marinus str. NATL1A]
Length = 178
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 53/82 (64%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VP MG+RQ MNLL G V+ L P A +F P G GGGT AKD +GN++ A+ W
Sbjct: 9 VPSMGRRQFMNLLTFGTVTGVALGALYPVAQYFTPYRAGGGGGGTNAKDELGNNVSASGW 68
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L+TH GDR+L +GLK D ++L
Sbjct: 69 LSTHPVGDRSLVQGLKGDPTYL 90
>gi|427706367|ref|YP_007048744.1| Cytochrome b6-f complex iron-sulfur subunit [Nostoc sp. PCC 7107]
gi|427358872|gb|AFY41594.1| Cytochrome b6-f complex iron-sulfur subunit [Nostoc sp. PCC 7107]
Length = 179
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 56/82 (68%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ L P +F PP G AGGGTTAKD++GND+ + +
Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPAAGGAGGGTTAKDSLGNDVSVSQF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L++H GDRTL +GLK D +++
Sbjct: 70 LDSHNVGDRTLVQGLKGDPTYI 91
>gi|317970493|ref|ZP_07971883.1| cytochrome b6-f complex iron-sulfur subunit [Synechococcus sp.
CB0205]
Length = 182
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 53 TSIPAD----RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKD 108
T IPA VP MG+RQ MNLL G+V+ L P A +F PP +GGGT AKD
Sbjct: 2 TQIPASASSGDVPGMGRRQFMNLLTFGSVTGVALGALYPVANYFIPPKAAGSGGGTAAKD 61
Query: 109 AIGNDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
+GN + A+ WL+ H GDR L +GLK D ++L
Sbjct: 62 ELGNSVTASGWLSDHREGDRNLVQGLKGDPTYL 94
>gi|298490988|ref|YP_003721165.1| cytochrome b6/f complex Fe-S subunit ['Nostoc azollae' 0708]
gi|298232906|gb|ADI64042.1| Cytochrome b6-f complex Fe-S subunit ['Nostoc azollae' 0708]
Length = 179
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 52/82 (63%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ L P +F PP G AGGG TAKD +G D+ + +
Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVIKYFIPPASGGAGGGVTAKDELGKDVSVSQF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L +H GDRTL +GLK D +++
Sbjct: 70 LESHNVGDRTLVQGLKGDPTYI 91
>gi|427711444|ref|YP_007060068.1| Rieske Fe-S protein [Synechococcus sp. PCC 6312]
gi|427375573|gb|AFY59525.1| Rieske Fe-S protein [Synechococcus sp. PCC 6312]
Length = 179
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 53/82 (64%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL GAV+ L P +F PP G AGGG AKD +GNDI+ + +
Sbjct: 10 VPDMGRRQFMNLLAFGAVTGTALGALYPVIRYFIPPSSGGAGGGLVAKDELGNDILVSAY 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L H GDR+L +GLK D +++
Sbjct: 70 LEKHLAGDRSLAQGLKGDPTYI 91
>gi|428313318|ref|YP_007124295.1| Rieske Fe-S protein [Microcoleus sp. PCC 7113]
gi|428254930|gb|AFZ20889.1| Rieske Fe-S protein [Microcoleus sp. PCC 7113]
Length = 180
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 55/84 (65%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G ++ L P FF PP G GGG TAKDA+GNDII + +
Sbjct: 10 VPDMGRRQFMNLLAFGTITGTFVGALYPIVKFFIPPSSGGVGGGVTAKDALGNDIIVSSF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHLQL 143
+ +H GDRTL +GLK D +++ +
Sbjct: 70 VASHSSGDRTLAQGLKGDPTYVVI 93
>gi|58613437|gb|AAW79305.1| chloroplast cytochrome b6 [Isochrysis galbana]
Length = 219
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 53/84 (63%)
Query: 58 DRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAA 117
D VPDM +R +MNL+LLG +P ++ + F PP G GGG TA+DA+GND+IA+
Sbjct: 48 DFVPDMQRRTIMNLVLLGGAGVPVLWLAGGFIYFLVPPSGGGGGGGITARDALGNDVIAS 107
Query: 118 DWLNTHGPGDRTLTEGLKQDFSHL 141
W++ + R L EGLK D +L
Sbjct: 108 KWISANPYPGRALVEGLKGDAHYL 131
>gi|354567739|ref|ZP_08986907.1| Cytochrome b6-f complex iron-sulfur subunit [Fischerella sp.
JSC-11]
gi|353542197|gb|EHC11661.1| Cytochrome b6-f complex iron-sulfur subunit [Fischerella sp.
JSC-11]
Length = 179
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ +L P +F PP G AGGGTTAKD +GND+ + +
Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVAAGVLFPVVKYFIPPASGGAGGGTTAKDELGNDVSVSKF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L +H GDR L +GLK D +++
Sbjct: 70 LESHNVGDRVLVQGLKGDPTYI 91
>gi|17229945|ref|NP_486493.1| cytochrome b6-f complex iron-sulfur subunit [Nostoc sp. PCC 7120]
gi|68566220|sp|Q93SX0.1|UCRIA_ANASP RecName: Full=Cytochrome b6-f complex iron-sulfur subunit 1;
AltName: Full=Plastohydroquinone:plastocyanin
oxidoreductase iron-sulfur protein 1; Short=ISP 1;
Short=RISP 1; AltName: Full=Rieske iron-sulfur protein 1
gi|223365763|pdb|2ZT9|D Chain D, Crystal Structure Of The Cytochrome B6f Complex From
Nostoc Sp. Pcc 7120
gi|451928946|pdb|4H44|D Chain D, 2.70 A Cytochrome B6f Complex Structure From Nostoc Pcc
7120
gi|14272374|emb|CAC39604.1| Rieske-FeS protein [Nostoc sp. PCC 7120]
gi|17131545|dbj|BAB74152.1| plastoquinol--plastocyanin reductase [Nostoc sp. PCC 7120]
Length = 179
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 54/82 (65%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ L P +F PP G AGGGTTAKD +GND+ + +
Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPAAGGAGGGTTAKDELGNDVSVSKF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L +H GDRTL +GLK D +++
Sbjct: 70 LESHNVGDRTLVQGLKGDPTYI 91
>gi|75906610|ref|YP_320906.1| cytochrome b6-f complex iron-sulfur subunit [Anabaena variabilis
ATCC 29413]
gi|68566231|sp|Q9L3P9.1|UCRIA_ANAVT RecName: Full=Cytochrome b6-f complex iron-sulfur subunit 1;
AltName: Full=Plastohydroquinone:plastocyanin
oxidoreductase iron-sulfur protein; Short=ISP;
Short=RISP; AltName: Full=Rieske iron-sulfur protein
gi|6911901|emb|CAB72244.1| Rieske FeS-protein [Anabaena variabilis]
gi|75700335|gb|ABA20011.1| Rieske (2Fe-2S) region [Anabaena variabilis ATCC 29413]
Length = 179
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 54/82 (65%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ L P +F PP G AGGGTTAKD +GND+ + +
Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPATGGAGGGTTAKDELGNDVSVSKF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L +H GDRTL +GLK D +++
Sbjct: 70 LESHNVGDRTLVQGLKGDPTYI 91
>gi|427730020|ref|YP_007076257.1| Rieske Fe-S protein [Nostoc sp. PCC 7524]
gi|427365939|gb|AFY48660.1| Rieske Fe-S protein [Nostoc sp. PCC 7524]
Length = 179
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 54/82 (65%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ L P +F PP G AGGGTTAKD +GND+ + +
Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPASGGAGGGTTAKDELGNDVSVSKF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L +H GDRTL +GLK D +++
Sbjct: 70 LESHNVGDRTLVQGLKGDPTYI 91
>gi|220906842|ref|YP_002482153.1| cytochrome b6-f complex iron-sulfur subunit [Cyanothece sp. PCC
7425]
gi|254790000|sp|B8HNR1.1|UCRI_CYAP4 RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|219863453|gb|ACL43792.1| Cytochrome b6-f complex Fe-S subunit [Cyanothece sp. PCC 7425]
Length = 179
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 51/82 (62%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G+ + ML P +F PP G GGG AKDA+GNDI +D+
Sbjct: 10 VPDMGRRQFMNLLTFGSATGVALGMLYPVVRYFIPPASGGVGGGVVAKDALGNDISVSDF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L H DR L +GLK D +++
Sbjct: 70 LAKHPANDRALAQGLKGDPTYI 91
>gi|16330220|ref|NP_440948.1| cytochrome B6-f complex iron-sulfur subunit [Synechocystis sp. PCC
6803]
gi|383321963|ref|YP_005382816.1| cytochrome B6-f complex iron-sulfur subunit [Synechocystis sp. PCC
6803 substr. GT-I]
gi|383325132|ref|YP_005385985.1| cytochrome B6-f complex iron-sulfur subunit [Synechocystis sp. PCC
6803 substr. PCC-P]
gi|383491016|ref|YP_005408692.1| cytochrome B6-f complex iron-sulfur subunit [Synechocystis sp. PCC
6803 substr. PCC-N]
gi|384436283|ref|YP_005651007.1| cytochrome B6-f complex iron-sulfur subunit [Synechocystis sp. PCC
6803]
gi|451814379|ref|YP_007450831.1| plastoquinol--plastocyanin reductase [Synechocystis sp. PCC 6803]
gi|581749|emb|CAA41421.1| plastoquinol--plastocyanin reductase [Synechocystis sp. PCC 6803]
gi|1652708|dbj|BAA17628.1| plastoquinol--plastocyanin reductase [Synechocystis sp. PCC 6803]
gi|339273315|dbj|BAK49802.1| cytochrome B6-f complex iron-sulfur subunit [Synechocystis sp. PCC
6803]
gi|359271282|dbj|BAL28801.1| cytochrome B6-f complex iron-sulfur subunit [Synechocystis sp. PCC
6803 substr. GT-I]
gi|359274452|dbj|BAL31970.1| cytochrome B6-f complex iron-sulfur subunit [Synechocystis sp. PCC
6803 substr. PCC-N]
gi|359277622|dbj|BAL35139.1| cytochrome B6-f complex iron-sulfur subunit [Synechocystis sp. PCC
6803 substr. PCC-P]
gi|451780348|gb|AGF51317.1| plastoquinol--plastocyanin reductase [Synechocystis sp. PCC 6803]
Length = 192
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPD+G+RQ MNLL G ++ L P + PP G +GGG TAKDA+GND+ ++
Sbjct: 22 VPDLGRRQFMNLLTFGTITGVAAGALYPAVKYLIPPSSGGSGGGVTAKDALGNDVKVTEF 81
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L +H GDR L +GLK D +++
Sbjct: 82 LASHNAGDRVLAQGLKGDPTYI 103
>gi|33866373|ref|NP_897932.1| cytochrome b6-f complex iron-sulfur subunit [Synechococcus sp. WH
8102]
gi|68566133|sp|Q7U566.1|UCRI_SYNPX RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|33633151|emb|CAE08356.1| Cytochrome b6/f complex subunit (Rieske iron-sulfur protein)
[Synechococcus sp. WH 8102]
Length = 178
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 56/89 (62%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + + VP MG+RQ MNLL G+V+ L P +F PP AGGGTTAKD +GN
Sbjct: 2 TQLSSSDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPRAAGAGGGTTAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
I A WL++H GDR+L +GLK D ++L
Sbjct: 62 AITATGWLSSHPEGDRSLVQGLKGDPTYL 90
>gi|1717958|sp|P26290.2|UCRIB_SYNY3 RecName: Full=Cytochrome b6-f complex iron-sulfur subunit 2;
AltName: Full=Plastohydroquinone:plastocyanin
oxidoreductase iron-sulfur protein 2; Short=ISP 2;
Short=RISP 2; AltName: Full=Rieske iron-sulfur protein 2
gi|673498|emb|CAA41422.1| plastoquinol--plastocyanin reductase [Synechocystis sp. PCC 6803]
gi|407958131|dbj|BAM51371.1| cytochrome B6-f complex iron-sulfur subunit [Bacillus subtilis
BEST7613]
Length = 180
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPD+G+RQ MNLL G ++ L P + PP G +GGG TAKDA+GND+ ++
Sbjct: 10 VPDLGRRQFMNLLTFGTITGVAAGALYPAVKYLIPPSSGGSGGGVTAKDALGNDVKVTEF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L +H GDR L +GLK D +++
Sbjct: 70 LASHNAGDRVLAQGLKGDPTYI 91
>gi|318040331|ref|ZP_07972287.1| cytochrome b6-f complex iron-sulfur subunit [Synechococcus sp.
CB0101]
Length = 182
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 53 TSIPAD----RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKD 108
T IPA VP MG+RQ MNLL G+V+ L P +F PP +GGGT AKD
Sbjct: 2 TQIPASASSGDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPKAAGSGGGTAAKD 61
Query: 109 AIGNDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
+GN + A+ WL+ H GDR L +GLK D ++L
Sbjct: 62 ELGNAVTASGWLSNHREGDRNLVQGLKGDPTYL 94
>gi|412992333|emb|CCO20046.1| cytochrome b6-f complex iron-sulfur subunit [Bathycoccus prasinos]
Length = 218
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 55/84 (65%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
V DM KR +MNLLL+GA+ LP +L +A +F PP G G G AKDA GNDI A W
Sbjct: 48 VLDMAKRNVMNLLLVGALGLPGTTLLGGFAYYFVPPSAGGGGAGQAAKDAAGNDIKQATW 107
Query: 120 LNTHGPGDRTLTEGLKQDFSHLQL 143
L H PGD TL++GLK D ++L +
Sbjct: 108 LKNHLPGDYTLSQGLKGDATYLMV 131
>gi|434407685|ref|YP_007150570.1| Rieske Fe-S protein [Cylindrospermum stagnale PCC 7417]
gi|428261940|gb|AFZ27890.1| Rieske Fe-S protein [Cylindrospermum stagnale PCC 7417]
Length = 179
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 52/82 (63%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ L P +F PP G AGGG TAKD +GN++ + +
Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPASGGAGGGVTAKDELGNEVSVSKF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L + GDRTL +GLK D +++
Sbjct: 70 LESRNVGDRTLVQGLKGDPTYI 91
>gi|126695825|ref|YP_001090711.1| cytochrome b6-f complex iron-sulfur subunit [Prochlorococcus
marinus str. MIT 9301]
gi|156633654|sp|A3PBI5.1|UCRI_PROM0 RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|126542868|gb|ABO17110.1| Rieske iron-sulfur protein [Prochlorococcus marinus str. MIT 9301]
Length = 178
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + ++ VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN
Sbjct: 2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
I WL TH GDR+L +GLK D ++L
Sbjct: 62 PITKTGWLATHQAGDRSLVQGLKGDPTYL 90
>gi|123968055|ref|YP_001008913.1| cytochrome b6-f complex iron-sulfur subunit [Prochlorococcus
marinus str. AS9601]
gi|156633658|sp|A2BPU5.1|UCRI_PROMS RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|123198165|gb|ABM69806.1| Rieske iron-sulfur protein [Prochlorococcus marinus str. AS9601]
Length = 178
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + ++ VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN
Sbjct: 2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
I WL TH GDR+L +GLK D ++L
Sbjct: 62 PITKTGWLATHQAGDRSLVQGLKGDPTYL 90
>gi|159903004|ref|YP_001550348.1| cytochrome b6-f complex iron-sulfur subunit [Prochlorococcus
marinus str. MIT 9211]
gi|226725578|sp|A9BE84.1|UCRI_PROM4 RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|159888180|gb|ABX08394.1| Rieske iron-sulfur protein [Prochlorococcus marinus str. MIT 9211]
Length = 178
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 56 PADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDII 115
P+D VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN I
Sbjct: 6 PSD-VPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGNPIT 64
Query: 116 AADWLNTHGPGDRTLTEGLKQDFSHL 141
A+ WL+ H GDR+L +GLK D ++L
Sbjct: 65 ASGWLSNHPAGDRSLVQGLKGDPTYL 90
>gi|104641142|gb|ABF73013.1| plastid cytochrome b6-f complex iron-sulfur subunit protein
precursor [Karenia brevis]
Length = 199
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
V DM +R ++NLL LGAVS+P G+ L Y +FF PP G G G TA DA+GN + W
Sbjct: 28 VADMQRRTILNLLTLGAVSVPYGWCLFGYISFFFPPAEGGGGAGVTATDALGNVVTFEGW 87
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L + R L +G++ D ++L
Sbjct: 88 LKENNAETRKLVQGIRGDATYL 109
>gi|78778847|ref|YP_396959.1| cytochrome b6-f complex iron-sulfur subunit [Prochlorococcus
marinus str. MIT 9312]
gi|123554534|sp|Q31C72.1|UCRI_PROM9 RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|78712346|gb|ABB49523.1| Twin-arginine translocation pathway signal [Prochlorococcus marinus
str. MIT 9312]
gi|91070402|gb|ABE11314.1| Rieske iron-sulfur protein [uncultured Prochlorococcus marinus
clone HOT0M-10D2]
Length = 178
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + ++ VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN
Sbjct: 2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
+ WL TH GDR+L +GLK D ++L
Sbjct: 62 PVTKTGWLATHQAGDRSLVQGLKGDPTYL 90
>gi|414075907|ref|YP_006995225.1| rieske iron-sulfur protein [Anabaena sp. 90]
gi|413969323|gb|AFW93412.1| rieske iron-sulfur protein [Anabaena sp. 90]
Length = 179
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 54/82 (65%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ L P ++F PP G AGGGT AK+ +GND+ + +
Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVSYFIPPSSGGAGGGTVAKNELGNDVSVSQF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L++H G R+L +GLK D +++
Sbjct: 70 LDSHNVGGRSLVQGLKGDPTYI 91
>gi|282897568|ref|ZP_06305568.1| Rieske (2Fe-2S) region protein [Raphidiopsis brookii D9]
gi|281197491|gb|EFA72387.1| Rieske (2Fe-2S) region protein [Raphidiopsis brookii D9]
Length = 179
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 55/82 (67%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ +L P +F PP G AGGG+ AKD +GND+ + +
Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVAAGVLYPVVNYFIPPASGGAGGGSVAKDELGNDVSVSKF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L++H GDRTL +GLK D +++
Sbjct: 70 LSSHNVGDRTLVQGLKGDPTYI 91
>gi|157412878|ref|YP_001483744.1| cytochrome b6-f complex iron-sulfur subunit [Prochlorococcus
marinus str. MIT 9215]
gi|167011618|sp|A8G3H7.1|UCRI_PROM2 RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|157387453|gb|ABV50158.1| Rieske iron-sulfur protein [Prochlorococcus marinus str. MIT 9215]
Length = 178
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 52/89 (58%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + + VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN
Sbjct: 2 TQLSSKDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
I WL TH GDR+L +GLK D ++L
Sbjct: 62 PITKTGWLATHQAGDRSLVQGLKGDPTYL 90
>gi|33861019|ref|NP_892580.1| cytochrome b6-f complex iron-sulfur subunit [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|68566134|sp|Q7V2L4.1|UCRI_PROMP RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|33639751|emb|CAE18921.1| Rieske iron-sulfur protein [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
Length = 178
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 53/89 (59%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + ++ VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN
Sbjct: 2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
+ WL +H GDR+L +GLK D ++L
Sbjct: 62 PVTKTGWLASHQAGDRSLVQGLKGDPTYL 90
>gi|87123756|ref|ZP_01079606.1| Twin-arginine translocation pathway signal [Synechococcus sp.
RS9917]
gi|86168325|gb|EAQ69582.1| Twin-arginine translocation pathway signal [Synechococcus sp.
RS9917]
Length = 178
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + VP MG+RQ MNLL G+V+ L P +F PP +GGGT AKD +GN
Sbjct: 2 TQASSSDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPRAAGSGGGTAAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
I A WL+ H GDR+L +GLK D ++L
Sbjct: 62 PITATGWLSNHPSGDRSLVQGLKGDPTYL 90
>gi|434394776|ref|YP_007129723.1| Cytochrome b6-f complex iron-sulfur subunit [Gloeocapsa sp. PCC
7428]
gi|428266617|gb|AFZ32563.1| Cytochrome b6-f complex iron-sulfur subunit [Gloeocapsa sp. PCC
7428]
Length = 179
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 54/82 (65%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G ++ L P FF PP G AGGG AKDA+GNDI +++
Sbjct: 10 VPDMGRRQFMNLLTFGTITGTALGALYPVVKFFIPPSSGGAGGGVKAKDALGNDISVSNF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L TH PGDR L +GLK D +++
Sbjct: 70 LETHNPGDRVLAQGLKGDPTYI 91
>gi|282900937|ref|ZP_06308870.1| Rieske (2Fe-2S) region protein [Cylindrospermopsis raciborskii
CS-505]
gi|281194028|gb|EFA68992.1| Rieske (2Fe-2S) region protein [Cylindrospermopsis raciborskii
CS-505]
Length = 179
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 55/82 (67%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ +L P +F PP G AGGG+ AKD +GND+ + +
Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVAAGVLYPVVNYFIPPASGGAGGGSVAKDELGNDVSLSKF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L++H GDRTL +GLK D +++
Sbjct: 70 LSSHNVGDRTLVQGLKGDPTYI 91
>gi|123965761|ref|YP_001010842.1| cytochrome b6-f complex iron-sulfur subunit [Prochlorococcus
marinus str. MIT 9515]
gi|156633657|sp|A2BVC4.1|UCRI_PROM5 RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|123200127|gb|ABM71735.1| Rieske iron-sulfur protein [Prochlorococcus marinus str. MIT 9515]
Length = 178
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 52/89 (58%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + ++ VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN
Sbjct: 2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
+ WL H GDR+L +GLK D ++L
Sbjct: 62 PVTKTGWLANHQAGDRSLVQGLKGDPTYL 90
>gi|68067716|sp|P83794.2|UCRI_MASLA RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|149241303|pdb|2E74|D Chain D, Crystal Structure Of The Cytochrome B6f Complex From
M.Laminosus
gi|149241316|pdb|2E75|D Chain D, Crystal Structure Of The Cytochrome B6f Complex With
2-nonyl-4- Hydroxyquinoline N-oxide (nqno) From
M.laminosus
gi|149241327|pdb|2E76|D Chain D, Crystal Structure Of The Cytochrome B6f Complex With
Tridecyl- Stigmatellin (Tds) From M.Laminosus
gi|449802537|pdb|4H0L|D Chain D, Cytochrome B6f Complex Crystal Structure From
Mastigocladus Laminosus With N-side Inhibitor Nqno
gi|449802545|pdb|4H13|D Chain D, Crystal Structure Of The Cytochrome B6f Complex From
Mastigocladus Laminosus With Tds
gi|38641338|gb|AAR26240.1| Rieske iron-sulfur protein [Mastigocladus laminosus]
Length = 179
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 53/82 (64%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ L P +F PP G+ GGGTTAKD +GN++ + +
Sbjct: 10 VPDMGRRQFMNLLAFGTVTGVALGALYPLVKYFIPPSGGAVGGGTTAKDKLGNNVKVSKF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L +H GDR L +GLK D +++
Sbjct: 70 LESHNAGDRVLVQGLKGDPTYI 91
>gi|48425906|pdb|1VF5|D Chain D, Crystal Structure Of Cytochrome B6f Complex From
M.Laminosus
gi|48425914|pdb|1VF5|Q Chain Q, Crystal Structure Of Cytochrome B6f Complex From
M.Laminosus
gi|85544505|pdb|2D2C|D Chain D, Crystal Structure Of Cytochrome B6f Complex With Dbmib
From M. Laminosus
gi|85544513|pdb|2D2C|Q Chain Q, Crystal Structure Of Cytochrome B6f Complex With Dbmib
From M. Laminosus
Length = 179
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 53/82 (64%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ L P +F PP G+ GGGTTAKD +GN++ + +
Sbjct: 10 VPDMGRRQFMNLLAFGTVTGVALGALYPLVKYFIPPSGGAVGGGTTAKDKLGNNVKVSKF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L +H GDR L +GLK D +++
Sbjct: 70 LESHNAGDRVLVQGLKGDPTYI 91
>gi|428207060|ref|YP_007091413.1| Cytochrome b6-f complex Fe-S subunit [Chroococcidiopsis thermalis
PCC 7203]
gi|428008981|gb|AFY87544.1| Cytochrome b6-f complex Fe-S subunit [Chroococcidiopsis thermalis
PCC 7203]
Length = 179
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 50/82 (60%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VP MG+RQ MNLL G ++ L P +F PP G AGGG TAKD +GND+ + +
Sbjct: 10 VPGMGRRQFMNLLTFGTITGTALGALYPVVKYFIPPAAGGAGGGVTAKDELGNDVSVSQF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
PGDR+L +GLK D ++L
Sbjct: 70 TANRNPGDRSLVQGLKGDPTYL 91
>gi|254425052|ref|ZP_05038770.1| Cytochrome B6-F complex Fe-S subunit family [Synechococcus sp. PCC
7335]
gi|196192541|gb|EDX87505.1| Cytochrome B6-F complex Fe-S subunit family [Synechococcus sp. PCC
7335]
Length = 179
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPD+G+RQ MNLL G ++ P +F PP G GGG TAKDA+GND+ AA +
Sbjct: 10 VPDLGRRQFMNLLTFGTITGTALGAAYPIIKYFIPPSSGGGGGGVTAKDALGNDVKAAAF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L + PG + L +GLK D ++L
Sbjct: 70 LEENSPGAKVLVQGLKGDPTYL 91
>gi|427717136|ref|YP_007065130.1| Cytochrome b6-f complex iron-sulfur subunit [Calothrix sp. PCC
7507]
gi|427349572|gb|AFY32296.1| Cytochrome b6-f complex iron-sulfur subunit [Calothrix sp. PCC
7507]
Length = 179
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 52/82 (63%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPD+G+RQ M LL G V+ L P +F PP G +GGGTTAKD +GN + AA +
Sbjct: 10 VPDIGRRQFMTLLTFGTVTGVALGALYPVVKYFIPPATGGSGGGTTAKDELGNSVSAAKF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L +H GDR L +GLK D ++L
Sbjct: 70 LGSHNVGDRALVQGLKGDPTYL 91
>gi|33239912|ref|NP_874854.1| cytochrome b6-f complex iron-sulfur subunit [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
gi|68566136|sp|Q7VDC0.1|UCRI_PROMA RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|33237438|gb|AAP99506.1| Cytochrome b6/f complex subunit [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 178
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 56 PADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDII 115
P+D VP MG+RQ MNLL G + L P A FF P G GGTTAKD +GN +
Sbjct: 6 PSD-VPSMGRRQFMNLLTFGTATGVALGALYPVANFFMPLRAGGGTGGTTAKDELGNAVT 64
Query: 116 AADWLNTHGPGDRTLTEGLKQDFSHL 141
A WL+ H GDR+L +GLK D ++L
Sbjct: 65 ATGWLSNHPAGDRSLVQGLKGDPTYL 90
>gi|397571516|gb|EJK47838.1| hypothetical protein THAOC_33417 [Thalassiosira oceanica]
Length = 171
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 54/80 (67%)
Query: 62 DMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLN 121
D +R LMNL+L+G+ ++ G + VPY FF PPG G GGG+ AKDA+GN+I + +L
Sbjct: 45 DQNRRNLMNLILVGSAAVTVGGLAVPYILFFLPPGSGGGGGGSPAKDALGNEIFSKPYLA 104
Query: 122 THGPGDRTLTEGLKQDFSHL 141
PGD +L +GLK D ++L
Sbjct: 105 EKKPGDHSLAQGLKGDATYL 124
>gi|219121189|ref|XP_002185823.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582672|gb|ACI65293.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 217
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%)
Query: 62 DMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLN 121
D +R LMNL++LG+ ++ G VPY FF PP + TA+D G ++ A +L
Sbjct: 50 DQERRNLMNLIVLGSGAVTVGGFGVPYLAFFMPPSVAGGSNCVTARDKKGIEVDAKKYLE 109
Query: 122 THGPGDRTLTEGLKQDFSHL 141
GDR+L EGLK D ++L
Sbjct: 110 EKPEGDRSLVEGLKGDATYL 129
>gi|186680679|ref|YP_001863875.1| cytochrome b6-f complex iron-sulfur subunit [Nostoc punctiforme PCC
73102]
gi|226725577|sp|B2J3K2.1|UCRI_NOSP7 RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|186463131|gb|ACC78932.1| Rieske (2Fe-2S) domain protein [Nostoc punctiforme PCC 73102]
Length = 179
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 50/82 (60%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ L P +F PP G AGGGTTAKD +GND+ +
Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPATGGAGGGTTAKDELGNDVSVTKF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L GDR L +GLK D +++
Sbjct: 70 LENRNAGDRNLVQGLKGDPTYI 91
>gi|119512244|ref|ZP_01631332.1| Rieske (2Fe-2S) region protein [Nodularia spumigena CCY9414]
gi|119463088|gb|EAW44037.1| Rieske (2Fe-2S) region protein [Nodularia spumigena CCY9414]
Length = 179
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 52/82 (63%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDM +RQ MNLL G V+ L P +F PP G AGGGTTAKD +GND+ + +
Sbjct: 10 VPDMSRRQFMNLLTFGTVTGVALGALYPVVNYFIPPASGGAGGGTTAKDELGNDVSVSGF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L +H GDR L +GLK D +++
Sbjct: 70 LASHNVGDRALVQGLKGDPTYM 91
>gi|136705|sp|P14698.1|UCRI_NOSSP RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|97730|pir||A35580 probable plastoquinol-plastocyanin reductase (EC 1.10.99.1) Rieske
iron-sulfur protein - Nostoc sp. (PCC 7906)
gi|145026|gb|AAA23332.1| Rieske iron-sulfur protein (petC) [Nostoc sp.]
Length = 179
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 51/82 (62%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ L P +F PP G AGGGTTAKD +GND+ + +
Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVKYFIPPASGGAGGGTTAKDELGNDVSLSKF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L GDR L +GLK D +++
Sbjct: 70 LENRNAGDRALVQGLKGDPTYI 91
>gi|157833677|pdb|1RFS|A Chain A, Rieske Soluble Fragment From Spinach
Length = 139
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 41/50 (82%)
Query: 92 FAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
F PPG G+ GGT AKDA+GND+IAA+WL TH PGDRTLT+GLK D ++L
Sbjct: 1 FVPPGGGAGTGGTIAKDALGNDVIAAEWLKTHAPGDRTLTQGLKGDPTYL 50
>gi|254526257|ref|ZP_05138309.1| cytochrome b6-F complex iron-sulfur subunit [Prochlorococcus
marinus str. MIT 9202]
gi|221537681|gb|EEE40134.1| cytochrome b6-F complex iron-sulfur subunit [Prochlorococcus
marinus str. MIT 9202]
Length = 161
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 42/73 (57%)
Query: 69 MNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDR 128
MNLL G + L P A +F P G GGGT+AKD +GN I WL TH GDR
Sbjct: 1 MNLLTFGTATGVALGALYPVANYFMPLRAGGVGGGTSAKDELGNPITKTGWLATHQAGDR 60
Query: 129 TLTEGLKQDFSHL 141
+L +GLK D ++L
Sbjct: 61 SLVQGLKGDPTYL 73
>gi|193875790|gb|ACF24531.1| cytochrome b6-f complex iron-sulfur subunit [Gymnochlora stellata]
Length = 272
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 41/84 (48%)
Query: 58 DRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAA 117
D VPDMGKR MN L+L ++ PYA +F P G G A DA+G +
Sbjct: 101 DMVPDMGKRTTMNNLVLASLVPVIASTAGPYAFYFYPKATGGGAGAIQALDALGGPVTTE 160
Query: 118 DWLNTHGPGDRTLTEGLKQDFSHL 141
W H R L +G+K D ++L
Sbjct: 161 SWFKNHRAKSRDLVQGIKGDPTYL 184
>gi|452825263|gb|EME32261.1| cytochrome b6-f complex iron-sulfur subunit [Galdieria sulphuraria]
Length = 178
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPD+ KR +N LL SLP M+ Y+ FF P G+ T A+D GN+I D+
Sbjct: 9 VPDLSKRMFLNYALLCTASLPVIQMMFTYSRFFFPVSSGNP-DETVARDIEGNEIKKEDF 67
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
+ T PG R L +G K D +L
Sbjct: 68 IKTRKPGTRELVQGPKGDPHYL 89
>gi|427733752|ref|YP_007053296.1| Rieske Fe-S protein [Rivularia sp. PCC 7116]
gi|427368793|gb|AFY52749.1| Rieske Fe-S protein [Rivularia sp. PCC 7116]
Length = 179
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 53/82 (64%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ +L P +F PP G AGGGTTAKD +G+ + +D+
Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGVLYPVVKYFIPPSSGGAGGGTTAKDELGDTVSVSDF 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L H GDR L +GLK D +++
Sbjct: 70 LGKHNLGDRVLVQGLKGDPTYI 91
>gi|86606073|ref|YP_474836.1| cytochrome b6-f complex iron-sulfur subunit [Synechococcus sp.
JA-3-3Ab]
gi|123506523|sp|Q2JUP1.1|UCRI_SYNJA RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|86554615|gb|ABC99573.1| cytochrome b6-f complex, iron-sulfur subunit [Synechococcus sp.
JA-3-3Ab]
Length = 172
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%)
Query: 59 RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAAD 118
P M +R +N LL +V + L P +F PP G AG G A+DA+G I ++
Sbjct: 9 EAPPMSRRVFLNALLSSSVGVVVVGTLYPVVKYFIPPSSGGAGEGVIAQDALGKPISVSE 68
Query: 119 WLNTHGPGDRTLTEGLKQDFSHLQL 143
L TH DR L +GLK D +++ +
Sbjct: 69 LLATHAATDRVLAQGLKGDPTYIVI 93
>gi|434384395|ref|YP_007095006.1| Rieske Fe-S protein [Chamaesiphon minutus PCC 6605]
gi|428015385|gb|AFY91479.1| Rieske Fe-S protein [Chamaesiphon minutus PCC 6605]
Length = 179
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 55/85 (64%), Gaps = 6/85 (7%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFML---VPYATFFAPPGLGSAGGGTTAKDAIGNDIIA 116
VPD+G+RQ MNLL G + TG +L P+ +F PP G AGGG+TAKDA G+D+
Sbjct: 10 VPDLGRRQFMNLLTFGTI---TGMVLGAAYPFVAYFVPPASGGAGGGSTAKDAKGDDVKV 66
Query: 117 ADWLNTHGPGDRTLTEGLKQDFSHL 141
+ ++ GDR LT+GLK D +++
Sbjct: 67 SAFIAGKAKGDRELTQGLKGDPTYI 91
>gi|86609084|ref|YP_477846.1| cytochrome b6-f complex iron-sulfur subunit [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|123502191|sp|Q2JL39.1|UCRI_SYNJB RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|86557626|gb|ABD02583.1| cytochrome b6-f complex, iron-sulfur subunit [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 172
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%)
Query: 59 RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAAD 118
P M +R L+N LL G+V + L P +F PP G G G A+DA+G I ++
Sbjct: 9 EAPPMSRRVLLNALLSGSVGVVVVGALYPVVKYFIPPSAGGGGEGLIAQDALGKPISVSE 68
Query: 119 WLNTHGPGDRTLTEGLKQDFSHLQL 143
L TH DR L +GLK D +++ +
Sbjct: 69 LLATHAATDRVLAQGLKGDPTYIVI 93
>gi|87124537|ref|ZP_01080386.1| Twin-arginine translocation pathway signal [Synechococcus sp.
RS9917]
gi|86168109|gb|EAQ69367.1| Twin-arginine translocation pathway signal [Synechococcus sp.
RS9917]
Length = 184
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 42/84 (50%)
Query: 58 DRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAA 117
D VP +RQL+N L GAV L P P SA GG A++A G I
Sbjct: 13 DSVPSPSRRQLLNWLSFGAVGGVALGTLYPVLRMLTPSREPSAAGGVLARNAQGEPIALT 72
Query: 118 DWLNTHGPGDRTLTEGLKQDFSHL 141
WL H GDR+L +GLK D ++L
Sbjct: 73 GWLADHDVGDRSLVQGLKGDPTYL 96
>gi|58613441|gb|AAW79307.1| chloroplast cytochrome b6 [Acetabularia acetabulum]
Length = 174
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 31/45 (68%)
Query: 97 LGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
+G GG AKDA+GND+ WL TH PGDR+L +GLK D ++L
Sbjct: 42 IGGGAGGQVAKDALGNDVTQTSWLTTHKPGDRSLAQGLKGDPTYL 86
>gi|427422292|ref|ZP_18912475.1| Rieske Fe-S protein [Leptolyngbya sp. PCC 7375]
gi|425758169|gb|EKU99023.1| Rieske Fe-S protein [Leptolyngbya sp. PCC 7375]
Length = 177
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 59 RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAAD 118
VP + +RQL+N L V+ G L P A FF PP S GGG AKD +G I A+
Sbjct: 8 EVPSLSRRQLLNFLTGATVAATAGSALYPVAKFFIPPREVSEGGGILAKDKLGTPIPASQ 67
Query: 119 WLNTHGPGDRTLTEGLKQDFSHL 141
L + PG R L GL + ++L
Sbjct: 68 IL-ANPPGTRALIAGLASEPTYL 89
>gi|88770710|gb|ABD51958.1| chloroplast cytochrome b6 [Rhodomonas salina]
Length = 99
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 41/71 (57%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+R LMN LL G+++ P + +F P G GGG AKDA+GND+ W
Sbjct: 29 VPDMGRRNLMNALLTGSIAGPILVLPAVLISFLTPAKSGGGGGGLVAKDALGNDVKVDAW 88
Query: 120 LNTHGPGDRTL 130
L TH G R L
Sbjct: 89 LATHPAGARAL 99
>gi|68566192|sp|Q7XYM4.1|UCRIA_BIGNA RecName: Full=Cytochrome b6-f complex iron-sulfur subunit,
chloroplastic; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; AltName: Full=Rieske iron-sulfur
protein; Short=ISP; Short=RISP; Flags: Precursor
gi|32307530|gb|AAP79170.1| Fe-S subunit of cytochrome c6f complex [Bigelowiella natans]
Length = 252
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 14 QLCSSKGGMFCPSRAFLVKPARTQMVTKNPM---GMKIKCQATSIPADRVPDMGKRQLMN 70
QL + +G + P +F +R V++N + K QA D VPDMGKR+LMN
Sbjct: 36 QLSAVRGKIAAPRTSFQNAVSR---VSRNQLPSSSRKAVAQAFLSNPDMVPDMGKRKLMN 92
Query: 71 LLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTL 130
L+L AV+ Y +F PP G GG A DA+GN + A W +H R L
Sbjct: 93 NLVLAAVAPVVASAGGCYLYYFYPPQTGGGGGAVGALDALGNPVSAESWFKSHKKNARDL 152
Query: 131 TEGLKQDFSHL 141
+G+K D ++L
Sbjct: 153 VQGIKGDPTYL 163
>gi|254430112|ref|ZP_05043815.1| cytochrome b6-F complex iron-sulfur subunit [Cyanobium sp. PCC
7001]
gi|197624565|gb|EDY37124.1| cytochrome b6-F complex iron-sulfur subunit [Cyanobium sp. PCC
7001]
Length = 161
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 44/73 (60%)
Query: 69 MNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDR 128
MNLL G+V+ L P +F PP +GGGT AKD +GN + A WL +H GDR
Sbjct: 1 MNLLTFGSVTGVALGALYPVVNYFIPPKAAGSGGGTAAKDELGNPVTANGWLGSHKEGDR 60
Query: 129 TLTEGLKQDFSHL 141
+L +GLK D ++L
Sbjct: 61 SLVQGLKGDPTYL 73
>gi|254426160|ref|ZP_05039877.1| Cytochrome B6-F complex Fe-S subunit family [Synechococcus sp. PCC
7335]
gi|196188583|gb|EDX83548.1| Cytochrome B6-F complex Fe-S subunit family [Synechococcus sp. PCC
7335]
Length = 182
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 54 SIPADR----VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDA 109
++P+D +P + +RQL+N L AV++ G L P FF PP S GGG AKD
Sbjct: 4 ALPSDNLSPDIPSLSRRQLLNFLTGAAVAVTAGGALYPVGKFFVPPKEVSEGGGILAKDR 63
Query: 110 IGNDIIAADWLNTHGPGDRTLTEGLKQDFSHLQL 143
+GN I A+ L T PG R L GL + +++ +
Sbjct: 64 LGNPIPASQIL-TEPPGSRALVAGLAGEPTYMTV 96
>gi|428775947|ref|YP_007167734.1| Plastoquinol--plastocyanin reductase [Halothece sp. PCC 7418]
gi|428690226|gb|AFZ43520.1| Plastoquinol--plastocyanin reductase [Halothece sp. PCC 7418]
Length = 177
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
+IP + P++ +RQL+N L V+ G L P + FF PP +AGGG AKD +GN
Sbjct: 3 NAIP-NESPELSRRQLLNFLTGATVAATVGAALYPVSQFFVPPREVNAGGGILAKDKLGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
I A+ L + PG R L GL + ++L
Sbjct: 62 PIPASQIL-ANPPGTRALIAGLAGEPTYL 89
>gi|170076546|ref|YP_001733186.1| Rieske iron-sulfur protein paralog [Synechococcus sp. PCC 7002]
gi|169887408|gb|ACB01116.1| Rieske iron-sulfur protein paralog [Synechococcus sp. PCC 7002]
Length = 163
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
S+P D P + +RQL+N L V G L P A FF+PP A G AKD GN
Sbjct: 3 NSLPIDS-PSLSRRQLLNFLTGAVVVSTIGPALYPVAKFFSPPKEVGADGSILAKDINGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKQDFSHLQL 143
+I A L PG R L GL + ++L +
Sbjct: 62 -LIPASQLLAEAPGTRALVAGLAGEPTYLTI 91
>gi|300865689|ref|ZP_07110455.1| Cytochrome b6-f complex iron-sulfur subunit 3 [Oscillatoria sp. PCC
6506]
gi|300336285|emb|CBN55605.1| Cytochrome b6-f complex iron-sulfur subunit 3 [Oscillatoria sp. PCC
6506]
Length = 177
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
P + +RQL+N L V+ G L P A + PP AGG AKD +GN I A+ L
Sbjct: 10 PSISRRQLLNFLTGAVVASTAGAALYPVAKYLIPPTESGAGGAIIAKDKLGNPIPASQIL 69
Query: 121 NTHGPGDRTLTEGLKQDFSHL 141
PG R L GL + ++L
Sbjct: 70 -AEPPGTRALVAGLAGEPTYL 89
>gi|323450518|gb|EGB06399.1| hypothetical protein AURANDRAFT_59217 [Aureococcus anophagefferens]
Length = 168
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 63 MGKRQLMNLLLLGAVSLP-TGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLN 121
M +R +MNL+LL LP G + +PY FF P G G GGG A G+ + WL
Sbjct: 1 MERRNIMNLVLLFGGVLPAVGGLAIPYVLFFIPRGGGGGGGGLPALTKAGDAVTFDSWLG 60
Query: 122 THGPGDRTLTEGLKQDFSHL 141
+H GDR L +GLK D ++L
Sbjct: 61 SHKVGDRELVQGLKGDATYL 80
>gi|126660351|ref|ZP_01731464.1| cytochrome b6/f-complex iron-sulfur protein [Cyanothece sp.
CCY0110]
gi|126618382|gb|EAZ89138.1| cytochrome b6/f-complex iron-sulfur protein [Cyanothece sp.
CCY0110]
Length = 177
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 63 MGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNT 122
+ +RQL+N L V++ G L P A FF PP GG AKD +GN I A+ L
Sbjct: 12 LSRRQLLNFLTGSTVAVVVGSALYPAAKFFTPPKEIGEGGAILAKDKLGNPIPASQIL-A 70
Query: 123 HGPGDRTLTEGLKQDFSHL 141
+ PG R L GL + ++L
Sbjct: 71 NPPGTRALVAGLAGEPTYL 89
>gi|158333648|ref|YP_001514820.1| Rieske iron-sulfur (cyt b6f) fusion protein [Acaryochloris marina
MBIC11017]
gi|158303889|gb|ABW25506.1| rieske iron-sulfur (cyt b6f) fusion protein [Acaryochloris marina
MBIC11017]
Length = 343
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
P + +R+ +N L AV++ G L P + F PP G AKDA+GN I + L
Sbjct: 10 PSLSRRRFLNFLTGSAVAITAGATLYPISRVFVPPNSSRGAGRVLAKDALGNPIPTSQLL 69
Query: 121 NTHGPGDRTLTEGLKQDFSHLQLIL 145
PG R L GL + ++L L +
Sbjct: 70 -AEPPGTRALVAGLDSEPTYLTLTI 93
>gi|170026503|gb|ACB05924.1| rieske iron-sulfur protein of cytochrome B6/F complex
[Chlamydomonas reinhardtii]
gi|170026505|gb|ACB05925.1| rieske iron-sulfur protein of cytochrome B6/F complex
[Chlamydomonas reinhardtii]
gi|170026507|gb|ACB05926.1| rieske iron-sulfur protein of cytochrome B6/F complex
[Chlamydomonas reinhardtii]
gi|170026509|gb|ACB05927.1| rieske iron-sulfur protein of cytochrome B6/F complex
[Chlamydomonas reinhardtii]
gi|170026511|gb|ACB05928.1| rieske iron-sulfur protein of cytochrome B6/F complex
[Chlamydomonas reinhardtii]
gi|170026513|gb|ACB05929.1| rieske iron-sulfur protein of cytochrome B6/F complex
[Chlamydomonas reinhardtii]
gi|170026515|gb|ACB05930.1| rieske iron-sulfur protein of cytochrome B6/F complex
[Chlamydomonas reinhardtii]
Length = 100
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 29/36 (80%)
Query: 106 AKDAIGNDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
AKDA+GNDI A +WL TH GDR+L++GLK D ++L
Sbjct: 10 AKDALGNDIKAGEWLKTHLAGDRSLSQGLKGDPTYL 45
>gi|58613439|gb|AAW79306.1| chloroplast cytochrome b6 [Pavlova lutheri]
Length = 149
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 37/54 (68%)
Query: 88 YATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
YA FFAPPG + GGG TA DA+G+D+ WL TH GDR L EGLK D ++L
Sbjct: 8 YAYFFAPPGSAAGGGGVTAHDALGDDVTVEKWLATHPAGDRKLVEGLKGDATYL 61
>gi|359463486|ref|ZP_09252049.1| Rieske iron-sulfur (cyt b6f) fusion protein [Acaryochloris sp.
CCMEE 5410]
Length = 374
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
P M +RQL+N L V++ G +L P A FF PP + G AKD G I A L
Sbjct: 38 PSMSRRQLLNFLTGSVVAITAGSVLYPGAKFFIPPSEENDSGAVLAKDIHGKPIPAQQVL 97
Query: 121 NTHGPGDRTLTEGLKQDFSHL 141
+ PG R L GL + ++L
Sbjct: 98 -ANPPGTRALIAGLAGEPTYL 117
>gi|40889430|pdb|1Q90|C Chain C, Structure Of The Cytochrome B6f (Plastohydroquinone :
Plastocyanin Oxidoreductase) From Chlamydomonas
Reinhardtii
Length = 127
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 29/36 (80%)
Query: 106 AKDAIGNDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
AKDA+GNDI A +WL TH GDR+L++GLK D ++L
Sbjct: 3 AKDALGNDIKAGEWLKTHLAGDRSLSQGLKGDPTYL 38
>gi|254422182|ref|ZP_05035900.1| Cytochrome B6-F complex Fe-S subunit family [Synechococcus sp. PCC
7335]
gi|196189671|gb|EDX84635.1| Cytochrome B6-F complex Fe-S subunit family [Synechococcus sp. PCC
7335]
Length = 177
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
P + +RQLMN V+ G+ L P FF P + G G A+D +GN I A L
Sbjct: 10 PSLSRRQLMNFFTGSVVAATAGYALYPMGKFFISPKESNEGNGILARDQLGNPIPAGQIL 69
Query: 121 NTHGPGDRTLTEGLKQDFSHL 141
PG R L G+ + ++L
Sbjct: 70 -VEPPGTRALVAGIAGEPTYL 89
>gi|172038323|ref|YP_001804824.1| cytochrome b6-f complex iron-sulfur subunit [Cyanothece sp. ATCC
51142]
gi|354554329|ref|ZP_08973634.1| Plastoquinol--plastocyanin reductase [Cyanothece sp. ATCC 51472]
gi|171699777|gb|ACB52758.1| cytochrome b6-f complex Rieske iron-sulfur protein,
plastoquinol--plastocyanin reductase [Cyanothece sp.
ATCC 51142]
gi|353554008|gb|EHC23399.1| Plastoquinol--plastocyanin reductase [Cyanothece sp. ATCC 51472]
Length = 177
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 63 MGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNT 122
+ +RQL+N L V++ G L P A FF PP GG AKD +GN I A+ L
Sbjct: 12 LSRRQLLNFLTGSTVAVVAGSALYPAAKFFTPPKETGEGGAILAKDKLGNPIPASQILE- 70
Query: 123 HGPGDRTLTEGLKQDFSHL 141
+ P R L GL + ++L
Sbjct: 71 NPPETRALVAGLAGEPTYL 89
>gi|428216129|ref|YP_007089273.1| Rieske Fe-S protein [Oscillatoria acuminata PCC 6304]
gi|428004510|gb|AFY85353.1| Rieske Fe-S protein [Oscillatoria acuminata PCC 6304]
Length = 177
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
P M +RQL+N L V+ P A +F PP + GG AKD +GN I A+ L
Sbjct: 10 PSMSRRQLLNFLTGSVVAATASAAAYPVAKYFIPPKETTEGGAILAKDILGNPIPASQIL 69
Query: 121 NTHGPGDRTLTEGLKQDFSHLQL 143
PG R L GL D ++L +
Sbjct: 70 -AEPPGTRALVAGLAGDPTYLTV 91
>gi|443329577|ref|ZP_21058162.1| Rieske Fe-S protein [Xenococcus sp. PCC 7305]
gi|442790915|gb|ELS00417.1| Rieske Fe-S protein [Xenococcus sp. PCC 7305]
Length = 177
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
P M +RQL+N + A++ G L P A FF PP G G AKD GN II A +
Sbjct: 10 PSMSRRQLLNFITGAAIATTAGAALYPAAKFFVPPQEGGEDGSIIAKDKFGN-IIPASQI 68
Query: 121 NTHGPGDRTLTEGLKQDFSHLQL 143
PG R L GL + ++L +
Sbjct: 69 LDKPPGTRALVAGLAGEPTYLTV 91
>gi|269925048|gb|ACZ52834.1| chloroplast cytochrome B6/F complex Rieske iron-sulfur protein
[Volvox carteri f. nagariensis]
gi|269925050|gb|ACZ52835.1| chloroplast cytochrome B6/F complex Rieske iron-sulfur protein
[Volvox carteri f. nagariensis]
gi|269925052|gb|ACZ52836.1| chloroplast cytochrome B6/F complex Rieske iron-sulfur protein
[Volvox carteri f. nagariensis]
gi|269925054|gb|ACZ52837.1| chloroplast cytochrome B6/F complex Rieske iron-sulfur protein
[Volvox carteri f. nagariensis]
gi|269925056|gb|ACZ52838.1| chloroplast cytochrome B6/F complex Rieske iron-sulfur protein
[Volvox carteri f. nagariensis]
gi|269925058|gb|ACZ52839.1| chloroplast cytochrome B6/F complex Rieske iron-sulfur protein
[Volvox carteri f. nagariensis]
gi|269925060|gb|ACZ52840.1| chloroplast cytochrome B6/F complex Rieske iron-sulfur protein
[Volvox carteri f. nagariensis]
Length = 92
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 106 AKDAIGNDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
AKDA+GNDI A WL TH GDR+L++GLK D ++L
Sbjct: 2 AKDALGNDIKANAWLATHQKGDRSLSQGLKGDPTYL 37
>gi|218438667|ref|YP_002376996.1| cytochrome b6-f complex iron-sulfur subunit [Cyanothece sp. PCC
7424]
gi|218171395|gb|ACK70128.1| Plastoquinol--plastocyanin reductase [Cyanothece sp. PCC 7424]
Length = 177
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
P + +RQL+N L V+ G L P FF PP + GG AKD +GN I A L
Sbjct: 10 PSLSRRQLLNFLTGAVVATTAGASLYPALKFFIPPQEKTQGGAILAKDVLGNPIPAGQIL 69
Query: 121 NTHGPGDRTLTEGLKQDFSHLQL 143
+ G R L GL + ++L +
Sbjct: 70 -ANPAGTRALVAGLAGEPTYLTV 91
>gi|359461219|ref|ZP_09249782.1| Rieske iron-sulfur (cyt b6f) fusion protein [Acaryochloris sp.
CCMEE 5410]
Length = 343
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
P + +R+ +N L AV++ G L P + F PP G AKDA+G I + L
Sbjct: 10 PSLSRRRFLNFLTGSAVAITAGATLYPISRVFVPPNSSRGDGRVLAKDALGTPIPTSQLL 69
Query: 121 NTHGPGDRTLTEGLKQDFSHLQL 143
PG R L GL + ++L L
Sbjct: 70 -AEPPGTRALVAGLDSEPTYLTL 91
>gi|440136389|gb|AGB85043.1| chloroplast cytochrome b6-f complex iron-sulfur subunit, partial
[Auxenochlorella protothecoides]
Length = 128
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 106 AKDAIGNDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
AKDA+GND+ ++WL H PGD +L +GLK D ++L
Sbjct: 1 AKDALGNDVKKSEWLAKHQPGDHSLVQGLKGDATYL 36
>gi|440680775|ref|YP_007155570.1| Plastoquinol--plastocyanin reductase [Anabaena cylindrica PCC 7122]
gi|428677894|gb|AFZ56660.1| Plastoquinol--plastocyanin reductase [Anabaena cylindrica PCC 7122]
Length = 177
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
P M +RQL+N L V+ +L P A FF P S G AKD GN +I A +
Sbjct: 10 PSMSRRQLLNFLTGAVVATTASSLLYPAAKFFVAPTEASEDGSIFAKDIHGN-LIPAKQI 68
Query: 121 NTHGPGDRTLTEGLKQDFSHLQL 143
T G R L GL + ++L +
Sbjct: 69 LTEPAGTRALVGGLATEPTYLTM 91
>gi|428769369|ref|YP_007161159.1| Cytochrome b6-f complex iron-sulfur subunit [Cyanobacterium
aponinum PCC 10605]
gi|428683648|gb|AFZ53115.1| Cytochrome b6-f complex iron-sulfur subunit [Cyanobacterium
aponinum PCC 10605]
Length = 178
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Query: 54 SIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGND 113
S P D M +R L+N + A+++ G +L P FF PP G AKD GN
Sbjct: 4 SFPYDESASMSRRNLLNFITGAAIAVTAGGVLYPVGKFFIPPSDVGEDGSILAKDVNGN- 62
Query: 114 IIAADWLNTHGPGDRTLTEGLKQDFSHLQL 143
+I A + G R L GL + ++L +
Sbjct: 63 LIPASQILAEPIGTRALVAGLAGEPTYLTI 92
>gi|388325555|pdb|3AZC|A Chain A, Crystal Structure Of The Soluble Part Of Cytochrome B6f
Complex Iron- Sulfur Subunit From Thermosynechococcus
Elongatus Bp-1
Length = 133
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 102 GGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKQD 137
G AKDA+GNDI +++L H PGDR+L +G+K D
Sbjct: 5 GRAVAKDALGNDIKVSEYLAKHLPGDRSLAQGIKGD 40
>gi|37522607|ref|NP_925984.1| cytochrome b6-f complex iron-sulfur subunit [Gloeobacter violaceus
PCC 7421]
gi|68566132|sp|Q7NCE1.1|UCRI_GLOVI RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; Short=ISP; Short=RISP; AltName:
Full=Rieske iron-sulfur protein
gi|35213608|dbj|BAC90979.1| plastoquinol--plastocyanin reductase [Gloeobacter violaceus PCC
7421]
Length = 186
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 57 ADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIA 116
A +P M +RQL++ + GA++ T L P +F PP G G AKD G DI
Sbjct: 6 AQEIP-MSRRQLLSFVTGGAIAATTAATLYPVVLYFLPPSTAGGGEGVAAKDKEGKDISV 64
Query: 117 ADWLNTHGPGDRTLTEGL 134
+ L PG+ LT GL
Sbjct: 65 SKLLAAATPGEPVLTLGL 82
>gi|434408446|ref|YP_007151510.1| Cytochrome b6-f complex iron-sulfur subunit [Stanieria cyanosphaera
PCC 7437]
gi|428272199|gb|AFZ38139.1| Cytochrome b6-f complex iron-sulfur subunit [Stanieria cyanosphaera
PCC 7437]
Length = 177
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
P M +RQL+N L V+ G L P +F PP G AKD GN II A +
Sbjct: 10 PSMSRRQLLNFLTGAVVAATAGAALYPVGKYFIPPSEVGEDGSIIAKDINGN-IIPAGQI 68
Query: 121 NTHGPGDRTLTEGLKQDFSHLQL 143
PG R L GL + ++L +
Sbjct: 69 LAEPPGTRALVAGLAGEPTYLTV 91
>gi|40889432|pdb|1Q90|R Chain R, Structure Of The Cytochrome B6f (Plastohydroquinone :
Plastocyanin Oxidoreductase) From Chlamydomonas
Reinhardtii
Length = 49
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 57 ADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPP 95
+ VPDM KR +MNL+L G LP + + Y FF PP
Sbjct: 3 SSEVPDMNKRNIMNLILAGGAGLPITTLALGYGAFFVPP 41
>gi|427728367|ref|YP_007074604.1| Rieske Fe-S protein [Nostoc sp. PCC 7524]
gi|427364286|gb|AFY47007.1| Rieske Fe-S protein [Nostoc sp. PCC 7524]
Length = 178
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGS-AGGGTTAKDAIGNDIIAADW 119
P M +RQL+N V+ L P FF PP + A G AKD IG+ I A+
Sbjct: 10 PSMSRRQLLNFFSGAIVAATASAALYPATRFFVPPAENTDADGSILAKDQIGHPIPASQI 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHLQL 143
L PG R L GL + ++L +
Sbjct: 70 L-AEAPGTRALIAGLAGEPTYLTV 92
>gi|427722609|ref|YP_007069886.1| Cytochrome b6-f complex iron-sulfur subunit [Leptolyngbya sp. PCC
7376]
gi|427354329|gb|AFY37052.1| Cytochrome b6-f complex iron-sulfur subunit [Leptolyngbya sp. PCC
7376]
Length = 177
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
P + +RQL+N L V L P A +F PP G AKD GN +I L
Sbjct: 10 PSLSRRQLLNFLTGAVVVSTVAPALYPAAKYFVPPRKVEEDGSLLAKDINGN-LIPVSQL 68
Query: 121 NTHGPGDRTLTEGLKQDFSHLQL 143
PG R L GL + +++ +
Sbjct: 69 LAEEPGTRALVAGLAGEPTYVTI 91
>gi|17232003|ref|NP_488551.1| cytochrome b6-f complex iron-sulfur subunit [Nostoc sp. PCC 7120]
gi|68566219|sp|Q93SW8.1|UCRIB_ANASP RecName: Full=Cytochrome b6-f complex iron-sulfur subunit 2;
AltName: Full=Plastohydroquinone:plastocyanin
oxidoreductase iron-sulfur protein 2; Short=ISP 2;
Short=RISP 2; AltName: Full=Rieske iron-sulfur protein 2
gi|14272377|emb|CAC39606.1| putative Rieske-FeS-Protein [Nostoc sp. PCC 7120]
gi|17133647|dbj|BAB76210.1| cytochrome b6/f-complex iron-sulfur protein [Nostoc sp. PCC 7120]
Length = 178
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGS-AGGGTTAKDAIGNDIIAADW 119
P M +RQL+N V+ + P FF PP + A GG A+D IG+ I A+
Sbjct: 10 PSMSRRQLLNFFTGAIVATTASAAIYPATKFFMPPAESTDAEGGILAQDKIGHPIPASQI 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHLQL 143
L G R L GL + ++L +
Sbjct: 70 L-AQASGTRALIAGLAGEPTYLTV 92
>gi|428316478|ref|YP_007114360.1| Cytochrome b6-f complex iron-sulfur subunit [Oscillatoria
nigro-viridis PCC 7112]
gi|428240158|gb|AFZ05944.1| Cytochrome b6-f complex iron-sulfur subunit [Oscillatoria
nigro-viridis PCC 7112]
Length = 177
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 54 SIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGND 113
SIP + P M +RQL+N L AV+ L P A FF PP GS G AKD GN
Sbjct: 4 SIPLEN-PLMSRRQLLNFLTGAAVAATATAALYPAAKFFVPPAEGSEDGSLLAKDIYGN- 61
Query: 114 IIAADWLNTHGPGDRTLTEGLKQDFSHLQL 143
+I A + + G R L GL + ++L +
Sbjct: 62 LIPASQILAYPLGTRALVAGLAGEPTYLTV 91
>gi|75909583|ref|YP_323879.1| cytochrome b6-f complex iron-sulfur subunit [Anabaena variabilis
ATCC 29413]
gi|68566218|sp|Q93SW6.1|UCRIB_ANAVT RecName: Full=Cytochrome b6-f complex iron-sulfur subunit 2;
AltName: Full=Plastohydroquinone:plastocyanin
oxidoreductase iron-sulfur protein; Short=ISP;
Short=RISP; AltName: Full=Rieske iron-sulfur protein
gi|14250868|emb|CAC39244.1| putative Rieske-FeS protein [Anabaena variabilis ATCC 29413]
gi|75703308|gb|ABA22984.1| Rieske (2Fe-2S) region [Anabaena variabilis ATCC 29413]
Length = 178
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGS-AGGGTTAKDAIGNDIIAADW 119
P M +RQL+N V+ + P FF PP + A GG AKD IG+ I A+
Sbjct: 10 PSMSRRQLLNFFTGAIVAATASAAIYPATKFFMPPAESTDAEGGVLAKDKIGHPIPASQI 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHLQL 143
L G R L GL + ++L +
Sbjct: 70 L-VQASGTRALIAGLAGEPTYLTV 92
>gi|336436474|ref|ZP_08616186.1| hypothetical protein HMPREF0988_01771 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336007339|gb|EGN37364.1| hypothetical protein HMPREF0988_01771 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 637
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 55 IPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDA 109
IP D+ + +R L L ++G+V L G ++P +F APP G GG T + A
Sbjct: 422 IPKDKYKNKKQRTLCRLAVIGSVLLLIGTFILP--SFIAPPATGDVRGGNTNRAA 474
>gi|427708850|ref|YP_007051227.1| Cytochrome b6-f complex iron-sulfur subunit [Nostoc sp. PCC 7107]
gi|427361355|gb|AFY44077.1| Cytochrome b6-f complex iron-sulfur subunit [Nostoc sp. PCC 7107]
Length = 178
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGS-AGGGTTAKDAIGNDIIAADW 119
P + +RQL+N L V++ G L P A F PG + GG AKD +G I A+
Sbjct: 10 PSLSRRQLLNFLTGATVAVTAGAALYPAAKFLIAPGEKTGVGGAILAKDILGKQIPASQI 69
Query: 120 LNTHGPGDRTLTEGLKQDFSHL 141
L P R L GL + ++L
Sbjct: 70 L-AEPPESRALVAGLAGEPTYL 90
>gi|258577999|ref|XP_002543181.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237903447|gb|EEP77848.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 798
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 18/106 (16%)
Query: 54 SIPADRVPDMGKRQLMN---LLLL-------GAVSL-PTGFMLVPYATFFAPPGLGSAGG 102
S+P+D + + R+++N L LL G SL P G P + F+ PGLGS G
Sbjct: 327 SVPSDEINGLRTRRMVNSKKLDLLRDVLDNRGDKSLRPDGDKFTPSISRFSTPGLGSTTG 386
Query: 103 GTTAKDAIGN-DIIAADWLNTHGPG------DRTLTEGLKQDFSHL 141
T A D+ G D W+ G + L E K+ HL
Sbjct: 387 STPAPDSNGTFDSAELQWMEHPNQGNFNQQREYPLNEPYKKKVHHL 432
>gi|17229005|ref|NP_485553.1| cytochrome b6-f complex iron-sulfur subunit [Nostoc sp. PCC 7120]
gi|2500505|sp|P70758.1|UCRIC_ANASP RecName: Full=Cytochrome b6-f complex iron-sulfur subunit 3;
AltName: Full=Plastohydroquinone:plastocyanin
oxidoreductase iron-sulfur protein 3; Short=ISP 3;
Short=RISP 3; AltName: Full=Rieske iron-sulfur protein 3
gi|1613870|gb|AAB52987.1| ORFR3 [Nostoc sp. PCC 7120]
gi|14272382|emb|CAC39609.1| putative Rieske-Fe-S protein [Nostoc sp. PCC 7120]
gi|17135333|dbj|BAB77878.1| cytochrome b6/f-complex iron-sulfur protein [Nostoc sp. PCC 7120]
Length = 178
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFF-APPGLGSAGGGTTAKDAIG 111
SIP + P + +RQL+N + V++ G L P F AP AGG AKD +G
Sbjct: 3 NSIPIES-PSLSRRQLLNFITGATVAVTAGAALYPAGKFLIAPAEKTGAGGAILAKDILG 61
Query: 112 NDIIAADWLNTHGPGDRTLTEGLKQDFSHL 141
I A+ L P R L GL + ++L
Sbjct: 62 KQIPASQIL-AEPPQTRALVAGLAGEPTYL 90
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.133 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,355,510,264
Number of Sequences: 23463169
Number of extensions: 96543709
Number of successful extensions: 210877
Number of sequences better than 100.0: 240
Number of HSP's better than 100.0 without gapping: 232
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 210586
Number of HSP's gapped (non-prelim): 241
length of query: 145
length of database: 8,064,228,071
effective HSP length: 109
effective length of query: 36
effective length of database: 9,801,709,946
effective search space: 352861558056
effective search space used: 352861558056
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)