BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 032201
         (145 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q38732|DAG_ANTMA DAG protein, chloroplastic OS=Antirrhinum majus GN=DAG PE=2 SV=1
          Length = 230

 Score =  167 bits (423), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 88/114 (77%), Positives = 98/114 (85%), Gaps = 5/114 (4%)

Query: 36  PSRAHSRSILTVRAGATDSEYSSKRSSSNEPRE----TIMLPGCDYNHWLIVMEFPKDPA 91
           P ++ S +  TVRA  TD EYSS+R+++N        TIMLPGCDYNHWLIVMEFPKDPA
Sbjct: 42  PIKSRSAAYPTVRA-LTDGEYSSRRNNNNNNSGEERETIMLPGCDYNHWLIVMEFPKDPA 100

Query: 92  PTREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGV 145
           PTREQMI+TYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTV+EETSEKFKG+
Sbjct: 101 PTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVTEETSEKFKGL 154


>sp|Q9LKA5|UMP1_ARATH Uncharacterized protein At3g15000, mitochondrial OS=Arabidopsis
           thaliana GN=At3g15000 PE=1 SV=1
          Length = 395

 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 58/82 (70%), Gaps = 1/82 (1%)

Query: 62  SSNEPRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMYA 121
           S+  P+ETI+L GCD+ HWL+V+E P+   PTR+++I++Y+ TLA ++GS +EA+  +Y+
Sbjct: 82  SNRPPKETILLDGCDFEHWLVVVEPPQG-EPTRDEIIDSYIKTLAQIVGSEDEARMKIYS 140

Query: 122 FSTTTYTGFQCTVSEETSEKFK 143
            ST  Y  F   VSE+ S K K
Sbjct: 141 VSTRCYYAFGALVSEDLSHKLK 162


>sp|Q2IA00|SPEF2_PIG Sperm flagellar protein 2 OS=Sus scrofa GN=SPEF2 PE=2 SV=1
          Length = 1812

 Score = 30.0 bits (66), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 96   QMIE-TYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQ 131
            ++IE +Y+N++ TVL  + E +  + A+   T TGFQ
Sbjct: 1025 KLIENSYINSIKTVLRHLREGQHTVLAYLYDTRTGFQ 1061


>sp|Q8C9J3|SPEF2_MOUSE Sperm flagellar protein 2 OS=Mus musculus GN=Spef2 PE=2 SV=2
          Length = 1734

 Score = 29.3 bits (64), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 25/47 (53%)

Query: 85  EFPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQ 131
           E P    P  E + ++Y+N + TVL  + E + N+ ++   T T FQ
Sbjct: 924 ELPSFLVPYWELIEKSYINHIKTVLRHLRERQHNVLSYLYETRTSFQ 970


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.313    0.127    0.360 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,660,733
Number of Sequences: 539616
Number of extensions: 1737464
Number of successful extensions: 3718
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3709
Number of HSP's gapped (non-prelim): 16
length of query: 145
length of database: 191,569,459
effective HSP length: 106
effective length of query: 39
effective length of database: 134,370,163
effective search space: 5240436357
effective search space used: 5240436357
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)