BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032204
MAAAFQSLSWQDVHHHQAPSYASPECRIDLGSSSKCNNKISAMRTPTNKATEERVVNRRE
SPHSTTPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLML
EANNQPKLDDASGNRLMSRTALRNK

High Scoring Gene Products

Symbol, full name Information P value
YAB5
YABBY5
protein from Arabidopsis thaliana 1.2e-35
YAB2
YABBY2
protein from Arabidopsis thaliana 1.1e-25
YAB3
YABBY3
protein from Arabidopsis thaliana 5.9e-25
AFO
AT2G45190
protein from Arabidopsis thaliana 2.6e-24
YAB1
Protein YABBY 1
protein from Oryza sativa Japonica Group 1.0e-20
INO
INNER NO OUTER
protein from Arabidopsis thaliana 5.3e-17
CRC
AT1G69180
protein from Arabidopsis thaliana 3.0e-14
DL
Protein DROOPING LEAF
protein from Oryza sativa Japonica Group 7.9e-14

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032204
        (145 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2066311 - symbol:YAB5 "YABBY5" species:3702 "A...   385  1.2e-35   1
TAIR|locus:2826731 - symbol:YAB2 "YABBY2" species:3702 "A...   291  1.1e-25   1
TAIR|locus:2126931 - symbol:YAB3 "YABBY3" species:3702 "A...   284  5.9e-25   1
TAIR|locus:2005492 - symbol:AFO "AT2G45190" species:3702 ...   278  2.6e-24   1
UNIPROTKB|Q7XIM7 - symbol:YAB1 "Protein YABBY 1" species:...   244  1.0e-20   1
TAIR|locus:2028020 - symbol:INO "INNER NO OUTER" species:...   209  5.3e-17   1
TAIR|locus:2026418 - symbol:CRC "AT1G69180" species:3702 ...   183  3.0e-14   1
UNIPROTKB|Q76EJ0 - symbol:DL "Protein DROOPING LEAF" spec...   179  7.9e-14   1


>TAIR|locus:2066311 [details] [associations]
            symbol:YAB5 "YABBY5" species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=TAS] [GO:0006333 "chromatin assembly or disassembly"
            evidence=RCA] [GO:0006417 "regulation of translation" evidence=RCA]
            [GO:0009657 "plastid organization" evidence=RCA] [GO:0009965 "leaf
            morphogenesis" evidence=RCA] [GO:0030154 "cell differentiation"
            evidence=RCA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=RCA] InterPro:IPR009071 Pfam:PF04690
            GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
            GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.30.10 SUPFAM:SSF47095
            EMBL:AC002505 HOGENOM:HOG000239859 InterPro:IPR006780 EMBL:AK119091
            EMBL:BT003734 IPI:IPI00528245 PIR:T00991 RefSeq:NP_850080.1
            RefSeq:NP_850081.1 UniGene:At.38874 ProteinModelPortal:Q8GW46
            SMR:Q8GW46 STRING:Q8GW46 EnsemblPlants:AT2G26580.1
            EnsemblPlants:AT2G26580.2 GeneID:817199 KEGG:ath:AT2G26580
            GeneFarm:5115 TAIR:At2g26580 eggNOG:NOG246832 InParanoid:Q8GW46
            OMA:TRTITEQ PhylomeDB:Q8GW46 ProtClustDB:CLSN2690930
            Genevestigator:Q8GW46 GermOnline:AT2G26580 Uniprot:Q8GW46
        Length = 164

 Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 87/128 (67%), Positives = 96/128 (75%)

Query:     1 MAAAFQSLSWQDVHHHQAPSYASPECRIDLGSSSKCNNKISAMRTPTNKATEERVVNRRE 60
             MAAA QSLS  +    QA +YA PE     GSSS+ + KI + R  T   TE+R+VNR  
Sbjct:    51 MAAALQSLSRPNF---QATNYAVPE----YGSSSRSHTKIPS-RISTRTITEQRIVNR-- 100

Query:    61 SPHSTTPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLML 120
              P    PEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLML
Sbjct:   101 -P----PEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLML 155

Query:   121 EANNQPKL 128
             E+N Q K+
Sbjct:   156 ESNKQAKI 163


>TAIR|locus:2826731 [details] [associations]
            symbol:YAB2 "YABBY2" species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0010158 "abaxial cell fate
            specification" evidence=IDA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS]
            InterPro:IPR009071 Pfam:PF04690 GO:GO:0007275 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
            GO:GO:0003700 SUPFAM:SSF47095 EMBL:AC006932 GO:GO:0010158
            HOGENOM:HOG000239859 InterPro:IPR006780 EMBL:AF136539
            IPI:IPI00531086 RefSeq:NP_001077490.1 UniGene:At.11866
            ProteinModelPortal:Q9XFB0 SMR:Q9XFB0 EnsemblPlants:AT1G08465.1
            GeneID:3766682 KEGG:ath:AT1G08465 GeneFarm:5112 TAIR:At1g08465
            eggNOG:NOG328989 OMA:FCTTILA PhylomeDB:Q9XFB0
            ProtClustDB:CLSN2699038 Genevestigator:Q9XFB0 Uniprot:Q9XFB0
        Length = 184

 Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 68/122 (55%), Positives = 78/122 (63%)

Query:    11 QDVHHHQAPSYASPECRIDLGSSSKCNNKISAMRTPTNKATEERVVNRRESPHSTTPEKR 70
             QD+  H+  +  S   R D  SSS+  N +S           +R   R   P    PEKR
Sbjct:    64 QDLQPHRQHT-TSLVTRKDCASSSRSTNNLSE--------NIDREAPRM--PPIRPPEKR 112

Query:    71 QRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLEANNQPKLDD 130
             QRVPSAYN+FIKEEIQRIKA NP+ISHREAFSTAAKNWAHFPHIHFGL L+ N + K  D
Sbjct:   113 QRVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIHFGLKLDGNKKGKQLD 172

Query:   131 AS 132
              S
Sbjct:   173 QS 174


>TAIR|locus:2126931 [details] [associations]
            symbol:YAB3 "YABBY3" species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0010154 "fruit development" evidence=IMP] [GO:0010158 "abaxial
            cell fate specification" evidence=IGI] InterPro:IPR009071
            Pfam:PF04690 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0046872 GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.30.10
            SUPFAM:SSF47095 GO:GO:0010154 EMBL:AL161471 GO:GO:0010158
            HOGENOM:HOG000239859 InterPro:IPR006780 EMBL:AF069299 EMBL:AF136540
            EMBL:AY037186 EMBL:BT002662 IPI:IPI00528237 PIR:T01346
            RefSeq:NP_567154.1 UniGene:At.11867 IntAct:Q9XFB1 STRING:Q9XFB1
            PRIDE:Q9XFB1 EnsemblPlants:AT4G00180.1 GeneID:827914
            KEGG:ath:AT4G00180 GeneFarm:5113 TAIR:At4g00180 eggNOG:NOG305997
            InParanoid:Q9XFB1 OMA:GGQNINM PhylomeDB:Q9XFB1
            ProtClustDB:CLSN2689244 Genevestigator:Q9XFB1 GermOnline:AT4G00180
            Uniprot:Q9XFB1
        Length = 240

 Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 55/84 (65%), Positives = 62/84 (73%)

Query:    38 NKISAMRTPTNKATEERVVNRRESPHSTTPEKRQRVPSAYNQFIKEEIQRIKANNPDISH 97
             N+   M T   ++ +      R  P +  PEKRQRVPSAYN+FIKEEIQRIKA NPDISH
Sbjct:   121 NEHLVMATRNGRSVDHLQEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISH 180

Query:    98 REAFSTAAKNWAHFPHIHFGLMLE 121
             REAFS AAKNWAHFPHIHFGLM +
Sbjct:   181 REAFSAAAKNWAHFPHIHFGLMAD 204


>TAIR|locus:2005492 [details] [associations]
            symbol:AFO "AT2G45190" species:3702 "Arabidopsis
            thaliana" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISM;TAS] [GO:0009944 "polarity specification of
            adaxial/abaxial axis" evidence=ISS] [GO:0009909 "regulation of
            flower development" evidence=IMP] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0010154 "fruit development" evidence=IMP]
            [GO:0010158 "abaxial cell fate specification" evidence=IGI]
            [GO:0010159 "specification of organ position" evidence=IMP]
            [GO:0010093 "specification of floral organ identity" evidence=IMP]
            [GO:0010450 "inflorescence meristem growth" evidence=IMP]
            [GO:0006333 "chromatin assembly or disassembly" evidence=RCA]
            [GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
            [GO:0009793 "embryo development ending in seed dormancy"
            evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
            [GO:0010027 "thylakoid membrane organization" evidence=RCA]
            [GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
            [GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010228
            "vegetative to reproductive phase transition of meristem"
            evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
            evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
            [GO:0009933 "meristem structural organization" evidence=IMP]
            [GO:0045165 "cell fate commitment" evidence=IMP] InterPro:IPR009071
            Pfam:PF04690 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0046872 GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.30.10
            SUPFAM:SSF47095 GO:GO:0010154 GO:GO:0010093 GO:GO:0009909
            EMBL:AC002387 GO:GO:0009933 GO:GO:0010158 GO:GO:0010159
            GO:GO:0010450 HOGENOM:HOG000239859 InterPro:IPR006780 EMBL:AF136538
            EMBL:AF074948 EMBL:AF087015 IPI:IPI00516811 PIR:T51587
            RefSeq:NP_566037.1 UniGene:At.10852 ProteinModelPortal:O22152
            IntAct:O22152 STRING:O22152 EnsemblPlants:AT2G45190.1 GeneID:819127
            KEGG:ath:AT2G45190 GeneFarm:5111 TAIR:At2g45190 eggNOG:NOG239732
            InParanoid:O22152 OMA:KDGFFAP PhylomeDB:O22152
            ProtClustDB:CLSN2917332 Genevestigator:O22152 GermOnline:AT2G45190
            Uniprot:O22152
        Length = 229

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 53/65 (81%), Positives = 57/65 (87%)

Query:    62 PHSTTPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLE 121
             P +  PEKRQRVPSAYN+FIKEEIQRIKA NPDISHREAFS AAKNWAHFPHIHFGL+  
Sbjct:   133 PVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLV-- 190

Query:   122 ANNQP 126
              +NQP
Sbjct:   191 PDNQP 195


>UNIPROTKB|Q7XIM7 [details] [associations]
            symbol:YAB1 "Protein YABBY 1" species:39947 "Oryza sativa
            Japonica Group" [GO:0005634 "nucleus" evidence=IDA] [GO:0048833
            "specification of floral organ number" evidence=IMP]
            InterPro:IPR009071 Pfam:PF04690 GO:GO:0005634 GO:GO:0030154
            GO:GO:0046872 GO:GO:0003677 Gene3D:1.10.30.10 SUPFAM:SSF47095
            EMBL:AP008213 GO:GO:0048833 HOGENOM:HOG000239859 InterPro:IPR006780
            EMBL:AF098752 EMBL:AB274013 EMBL:AP003847 PIR:T51586
            RefSeq:NP_001058937.1 UniGene:Os.74707 STRING:Q7XIM7
            EnsemblPlants:LOC_Os07g06620.1 GeneID:4342449 KEGG:osa:4342449
            Gramene:Q7XIM7 eggNOG:NOG310834 ProtClustDB:CLSN2696557
            Uniprot:Q7XIM7
        Length = 169

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 44/52 (84%), Positives = 48/52 (92%)

Query:    67 PEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGL 118
             PEKRQRVPSAYN+FIKEEIQRIK +NP+ISHREAFS AAKNWAH P +HFGL
Sbjct:   106 PEKRQRVPSAYNRFIKEEIQRIKTSNPEISHREAFSAAAKNWAHLPRLHFGL 157


>TAIR|locus:2028020 [details] [associations]
            symbol:INO "INNER NO OUTER" species:3702 "Arabidopsis
            thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0009944 "polarity specification of
            adaxial/abaxial axis" evidence=IDA] [GO:0048481 "ovule development"
            evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0006333 "chromatin assembly or disassembly" evidence=RCA]
            InterPro:IPR009071 Pfam:PF04690 EMBL:CP002684 GO:GO:0005634
            GO:GO:0046872 GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.30.10
            SUPFAM:SSF47095 GO:GO:0048481 EMBL:AC007945 GO:GO:0009944
            EMBL:AC005292 InterPro:IPR006780 EMBL:AF195047 IPI:IPI00520101
            RefSeq:NP_564194.1 UniGene:At.11885 IntAct:Q9LDT3 STRING:Q9LDT3
            EnsemblPlants:AT1G23420.1 GeneID:838950 KEGG:ath:AT1G23420
            GeneFarm:5114 TAIR:At1g23420 eggNOG:NOG271352 InParanoid:Q9LDT3
            OMA:APSAYNC PhylomeDB:Q9LDT3 ProtClustDB:CLSN2687926
            Genevestigator:Q9LDT3 Uniprot:Q9LDT3
        Length = 231

 Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 40/64 (62%), Positives = 48/64 (75%)

Query:    52 EERVVNRRESPHSTTPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHF 111
             E+  V+R     +  PEKRQR PSAYN FIKEEI+R+KA NP ++H+EAFS AAKNWAHF
Sbjct:   117 EDEDVSRVYQVVNKPPEKRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHF 176

Query:   112 PHIH 115
             P  H
Sbjct:   177 PPAH 180


>TAIR|locus:2026418 [details] [associations]
            symbol:CRC "AT1G69180" species:3702 "Arabidopsis
            thaliana" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0010254 "nectary development" evidence=IMP]
            [GO:0048440 "carpel development" evidence=RCA;IMP] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            [GO:0009944 "polarity specification of adaxial/abaxial axis"
            evidence=TAS] [GO:0010582 "floral meristem determinacy"
            evidence=IGI] [GO:0048479 "style development" evidence=IMP]
            [GO:0006333 "chromatin assembly or disassembly" evidence=RCA]
            [GO:0009827 "plant-type cell wall modification" evidence=RCA]
            [GO:0009860 "pollen tube growth" evidence=RCA] [GO:0009886
            "post-embryonic morphogenesis" evidence=RCA] [GO:0009909
            "regulation of flower development" evidence=RCA] [GO:0010093
            "specification of floral organ identity" evidence=RCA] [GO:0031540
            "regulation of anthocyanin biosynthetic process" evidence=RCA]
            [GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
            development" evidence=RCA] [GO:0048481 "ovule development"
            evidence=RCA] [GO:0048507 "meristem development" evidence=RCA]
            InterPro:IPR009071 Pfam:PF04690 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0030154 GO:GO:0046872
            GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10
            SUPFAM:SSF47095 EMBL:AC008262 EMBL:AC018364 GO:GO:0010582
            GO:GO:0009944 EMBL:AF132606 EMBL:BT008618 EMBL:AY088672
            IPI:IPI00547204 PIR:G96715 RefSeq:NP_177078.1 UniGene:At.11478
            ProteinModelPortal:Q8L925 SMR:Q8L925 STRING:Q8L925
            EnsemblPlants:AT1G69180.1 GeneID:843249 KEGG:ath:AT1G69180
            GeneFarm:5110 TAIR:At1g69180 eggNOG:NOG250468 HOGENOM:HOG000239859
            InParanoid:Q8L925 OMA:CNTVLAL PhylomeDB:Q8L925
            ProtClustDB:CLSN2682517 Genevestigator:Q8L925 GO:GO:0010254
            GO:GO:0048479 InterPro:IPR006780 Uniprot:Q8L925
        Length = 181

 Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 32/45 (71%), Positives = 41/45 (91%)

Query:    67 PEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHF 111
             PEK+QR+PSAYN+F+++EIQRIK+ NP+I HREAFS AAKNWA +
Sbjct:   112 PEKKQRLPSAYNRFMRDEIQRIKSANPEIPHREAFSAAAKNWAKY 156


>UNIPROTKB|Q76EJ0 [details] [associations]
            symbol:DL "Protein DROOPING LEAF" species:39947 "Oryza
            sativa Japonica Group" [GO:0010022 "meristem determinacy"
            evidence=IGI;IMP] [GO:0048366 "leaf development" evidence=IMP]
            [GO:0048440 "carpel development" evidence=IMP] InterPro:IPR009071
            Pfam:PF04690 GO:GO:0005634 GO:GO:0030154 GO:GO:0046872
            GO:GO:0003677 EMBL:DP000009 EMBL:AP008209 Gene3D:1.10.30.10
            SUPFAM:SSF47095 GO:GO:0048440 GO:GO:0048366 EMBL:CM000140
            eggNOG:NOG250468 HOGENOM:HOG000239859 ProtClustDB:CLSN2682517
            InterPro:IPR006780 GO:GO:0010022 EMBL:AB106553 EMBL:AB106554
            EMBL:AY494713 RefSeq:NP_001049375.1 UniGene:Os.49773 STRING:Q76EJ0
            EnsemblPlants:LOC_Os03g11600.2 GeneID:4332058
            KEGG:dosa:Os03t0215200-00 KEGG:osa:4332058 Gramene:Q76EJ0
            Uniprot:Q76EJ0
        Length = 194

 Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 33/43 (76%), Positives = 38/43 (88%)

Query:    67 PEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWA 109
             PEK+ R+PSAYN+F++EEIQRIKA  PDI HREAFS AAKNWA
Sbjct:   102 PEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWA 144


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.124   0.368    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      145       145   0.00071  103 3  11 23  0.48    31
                                                     30  0.49    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  602 (64 KB)
  Total size of DFA:  154 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.13u 0.17s 19.30t   Elapsed:  00:00:01
  Total cpu time:  19.13u 0.17s 19.30t   Elapsed:  00:00:01
  Start:  Mon May 20 17:21:15 2013   End:  Mon May 20 17:21:16 2013

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