BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032207
(145 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q1ZXF1|ECHM_DICDI Probable enoyl-CoA hydratase, mitochondrial OS=Dictyostelium
discoideum GN=echs1 PE=3 SV=1
Length = 277
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 19 IAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGRAFCSGVDLTSAEDV 78
+ VT+NRPKSLN+L+ +++++ A K +D+ V II++GS +AF +G D+ E V
Sbjct: 34 VGLVTLNRPKSLNALSDGLISEINSAVKLFQEDKDVGSIIITGSEKAFAAGADIKEMEKV 93
Query: 79 FKGDVKDVETDTVAQME---RCRKPIIGAISGFAVTAGFEIALACDVLVAAKGAKFIDTH 135
D + D +AQ + RKPII A++G+A+ G E+A+ CD+++A + A F
Sbjct: 94 TLPDAYN--NDLLAQWHDLTKIRKPIIAAVNGYALGGGCELAMMCDIIIAGEKAVFGQPE 151
Query: 136 ARL 138
+L
Sbjct: 152 IKL 154
>sp|Q52995|ECHH_RHIME Probable enoyl-CoA hydratase OS=Rhizobium meliloti (strain 1021)
GN=fadB1 PE=3 SV=2
Length = 257
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 78/127 (61%), Gaps = 5/127 (3%)
Query: 7 ENLILVTRDPMGIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGRAF 66
E L++ T+ +G+ +T+NRP++LN+L +M ++ A K+ D D +V I+L+GS +AF
Sbjct: 4 ETLLVETQGRVGL--ITLNRPQALNALNAVLMRELDAALKAFDADRAVGAIVLAGSEKAF 61
Query: 67 CSGVDLTSAE--DVFKGDVKDVETDTVAQMERCRKPIIGAISGFAVTAGFEIALACDVLV 124
+G D+ + D G + D + RKP+I A+SGFA+ G E+A+ CD ++
Sbjct: 62 AAGADIKEMQGLDFVDGYLADF-LGGWEHVANARKPMIAAVSGFALGGGCELAMMCDFII 120
Query: 125 AAKGAKF 131
A++ AKF
Sbjct: 121 ASETAKF 127
>sp|P64016|ECHA8_MYCTU Probable enoyl-CoA hydratase echA8 OS=Mycobacterium tuberculosis
GN=echA8 PE=1 SV=1
Length = 257
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 72/123 (58%), Gaps = 2/123 (1%)
Query: 10 ILVTRDPMGIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGRAFCSG 69
ILV RD + +T+NRP++LN+L +M ++ A LD D + II++GS +AF +G
Sbjct: 6 ILVERDQR-VGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAG 64
Query: 70 VDLTSAEDVFKGDVKDVE-TDTVAQMERCRKPIIGAISGFAVTAGFEIALACDVLVAAKG 128
D+ D+ D + T ++ R P I A++G+A+ G E+A+ CDVL+AA
Sbjct: 65 ADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADT 124
Query: 129 AKF 131
AKF
Sbjct: 125 AKF 127
>sp|P64017|ECHA8_MYCBO Probable enoyl-CoA hydratase echA8 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=echA8 PE=3 SV=1
Length = 257
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 72/123 (58%), Gaps = 2/123 (1%)
Query: 10 ILVTRDPMGIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGRAFCSG 69
ILV RD + +T+NRP++LN+L +M ++ A LD D + II++GS +AF +G
Sbjct: 6 ILVERDQR-VGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAG 64
Query: 70 VDLTSAEDVFKGDVKDVE-TDTVAQMERCRKPIIGAISGFAVTAGFEIALACDVLVAAKG 128
D+ D+ D + T ++ R P I A++G+A+ G E+A+ CDVL+AA
Sbjct: 65 ADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADT 124
Query: 129 AKF 131
AKF
Sbjct: 125 AKF 127
>sp|P34559|ECHM_CAEEL Probable enoyl-CoA hydratase, mitochondrial OS=Caenorhabditis
elegans GN=ech-6 PE=1 SV=1
Length = 288
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 76/131 (58%), Gaps = 3/131 (2%)
Query: 4 TKSENLILVTR--DPMGIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSG 61
+K+ +I + + + +A + +NRPK+LN+L +M ++A A + LD D+SV I+++G
Sbjct: 28 SKAPEMIKIEKVGEKQNVALIKLNRPKALNALCAQLMTELADALEVLDTDKSVGAIVITG 87
Query: 62 SGRAFCSGVDLTS-AEDVFKGDVKDVETDTVAQMERCRKPIIGAISGFAVTAGFEIALAC 120
S RAF +G D+ + F + +KP+I A++GFA+ G E+A+ C
Sbjct: 88 SERAFAAGADIKEMTNNEFATTFSGSFLSNWTAVSDVKKPVIAAVNGFALGGGNELAMMC 147
Query: 121 DVLVAAKGAKF 131
D++ A + A+F
Sbjct: 148 DIIYAGEKARF 158
>sp|A4YI89|HPCD_METS5 3-hydroxypropionyl-coenzyme A dehydratase OS=Metallosphaera sedula
(strain ATCC 51363 / DSM 5348) GN=Msed_2001 PE=1 SV=1
Length = 259
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 73/124 (58%), Gaps = 7/124 (5%)
Query: 13 TRDPMGIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGRAFCSGVDL 72
T+ + ++T+NRP LN+L ++ ++ +A + D + VII++G G+AFC+G D+
Sbjct: 8 TKKEGNLFWITLNRPDKLNALNAKLLEELDRAVSQAESDPEIRVIIITGKGKAFCAGADI 67
Query: 73 T-----SAEDVFKGDVKDVETDTVAQMERCRKPIIGAISGFAVTAGFEIALACDVLVAAK 127
T + + +K K E + ++E KP I I+G+A+ G E+ALACD+ +AA+
Sbjct: 68 TQFNQLTPAEAWKFSKKGRE--IMDKIEALSKPTIAMINGYALGGGLELALACDIRIAAE 125
Query: 128 GAKF 131
A+
Sbjct: 126 EAQL 129
>sp|Q7U004|ECH12_MYCBO Probable enoyl-CoA hydratase echA12 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=echA12 PE=3 SV=1
Length = 285
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 20/145 (13%)
Query: 2 GQTKSENLILVTRDPMGIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSG 61
G + +L+LV IA +T+NRP+ +NS+ +M + +A + D SV V++L+G
Sbjct: 12 GYRSTVSLVLVEHPRPEIAQITLNRPERMNSMAFDVMVPLKEALAQVSYDNSVRVVVLTG 71
Query: 62 SGRAFCSGVDLTSAEDVFKGDVKDVET---------------DTVAQMERCRKPIIGAIS 106
+GR F SG D SA G V VE D + + R +P+I A++
Sbjct: 72 AGRGFSSGADHKSA-----GVVPHVENLTRPTYALRSMELLDDVILMLRRLHQPVIAAVN 126
Query: 107 GFAVTAGFEIALACDVLVAAKGAKF 131
G A+ G +ALA D+ VA+ A F
Sbjct: 127 GPAIGGGLCLALAADIRVASSSAYF 151
>sp|O07137|ECHA8_MYCLE Probable enoyl-CoA hydratase echA8 OS=Mycobacterium leprae (strain
TN) GN=echA8 PE=3 SV=1
Length = 257
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
Query: 19 IAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGRAFCSGVDLTSAEDV 78
+ +T+NRP++LN+L MM ++ A K LD D V I+++GS + F +G D+ +
Sbjct: 14 VGIITLNRPQALNALNSQMMNEITNAAKELDIDPDVGAILITGSPKVFAAGADIKEMASL 73
Query: 79 FKGDVKDVE-TDTVAQMERCRKPIIGAISGFAVTAGFEIALACDVLVAAKGAKF 131
D D + ++ R P+I A++G+A+ G E+A+ CD+L+AA AKF
Sbjct: 74 TFTDAFDADFFSAWGKLAAVRTPMIAAVAGYALGGGCELAMMCDLLIAADTAKF 127
>sp|P52046|CRT_CLOAB 3-hydroxybutyryl-CoA dehydratase OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=crt PE=3 SV=1
Length = 261
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 74/117 (63%), Gaps = 4/117 (3%)
Query: 19 IAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSG-RAFCSGVDLTSAED 77
+A VTINRPK+LN+L + +M ++ D VL +IL+G+G ++F +G D++ ++
Sbjct: 14 VAVVTINRPKALNALNSDTLKEMDYVIGEIENDSEVLAVILTGAGEKSFVAGADISEMKE 73
Query: 78 V--FKGDVKDVETDTV-AQMERCRKPIIGAISGFAVTAGFEIALACDVLVAAKGAKF 131
+ +G + + V ++E KP+I A++GFA+ G EIA++CD+ +A+ A+F
Sbjct: 74 MNTIEGRKFGILGNKVFRRLELLEKPVIAAVNGFALGGGCEIAMSCDIRIASSNARF 130
>sp|O53163|ECH12_MYCTU Probable enoyl-CoA hydratase echA12 OS=Mycobacterium tuberculosis
GN=echA12 PE=3 SV=1
Length = 285
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 20/145 (13%)
Query: 2 GQTKSENLILVTRDPMGIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSG 61
G + +L+LV IA +T+NRP+ +NS+ +M + +A + D SV V++L+G
Sbjct: 12 GYRSTVSLVLVEHPRPEIAQITLNRPERMNSMAFDVMVPLKEALAQVSYDNSVRVVVLTG 71
Query: 62 SGRAFCSGVDLTSAEDVFKGDVKDVET---------------DTVAQMERCRKPIIGAIS 106
+GR F G D SA G V VE D + + R +P+I A++
Sbjct: 72 AGRGFSPGADHKSA-----GVVPHVENLTRPTYALRSMELLDDVILMLRRLHQPVIAAVN 126
Query: 107 GFAVTAGFEIALACDVLVAAKGAKF 131
G A+ G +ALA D+ VA+ A F
Sbjct: 127 GPAIGGGLCLALAADIRVASSSAYF 151
>sp|P53526|ECH12_MYCLE Probable enoyl-CoA hydratase echA12 OS=Mycobacterium leprae (strain
TN) GN=echA12 PE=3 SV=1
Length = 294
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 19 IAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGRAFCSGVD--LTSAE 76
+A +T+NRP +NS+ +M + Q K + D SV V++L+G+GR FCSG D T+
Sbjct: 31 VALITLNRPGRMNSMALDLMKSLKQVLKRITYDHSVRVVVLTGAGRGFCSGADQKFTAPV 90
Query: 77 DVFKGDVKDVET--------DTVAQMERCRKPIIGAISGFAVTAGFEIALACDVLVAAKG 128
+G + V + + + R +P+I AI+G A+ G +ALA DV VA+
Sbjct: 91 PQVEGLTQPVRALRAMELLEEVILALRRLHQPVIAAINGPAIGGGLCLALAADVRVASTR 150
Query: 129 AKF 131
A F
Sbjct: 151 AYF 153
>sp|P76082|PAAF_ECOLI 2,3-dehydroadipyl-CoA hydratase OS=Escherichia coli (strain K12)
GN=paaF PE=1 SV=1
Length = 255
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 72/123 (58%), Gaps = 2/123 (1%)
Query: 10 ILVTRDPMGIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGRAFCSG 69
++V+R + +T+NRP + N+L +++ + ++ D S+ V +++G+ R F +G
Sbjct: 4 LIVSRQ-QRVLLLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAG 62
Query: 70 VDLTS-AEDVFKGDVKDVETDTVAQMERCRKPIIGAISGFAVTAGFEIALACDVLVAAKG 128
DL AE + D A+++ KP+I A++G+A+ AG E+AL CDV+VA +
Sbjct: 63 ADLNEMAEKDLAATLNDTRPQLWARLQAFNKPLIAAVNGYALGAGCELALLCDVVVAGEN 122
Query: 129 AKF 131
A+F
Sbjct: 123 ARF 125
>sp|Q8BH95|ECHM_MOUSE Enoyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Echs1 PE=1
SV=1
Length = 290
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 19 IAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGRAFCSGVDLTSAED- 77
+ + +NRPK+LN+L ++ ++ QA ++ ++D +V I+L+G +AF +G D+ ++
Sbjct: 47 VGLIQLNRPKALNALCNGLIEELNQALETFEQDPAVGAIVLTGGDKAFAAGADIKEMQNR 106
Query: 78 VFKGDVKDVETDTVAQMERCRKPIIGAISGFAVTAGFEIALACDVLVAAKGAKF 131
F+ + R +KP+I A++G+A+ G E+A+ CD++ A + A+F
Sbjct: 107 TFQDCYSSKFLSHWDHITRVKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQF 160
>sp|Q58DM8|ECHM_BOVIN Enoyl-CoA hydratase, mitochondrial OS=Bos taurus GN=ECHS1 PE=2 SV=1
Length = 290
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 19 IAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGRAFCSGVDLTSAEDV 78
+ + +NRPK+LN+L ++ ++ QA ++ ++D +V I+L+G + F +G D+ + +
Sbjct: 47 VGLIQLNRPKALNALCNGLIVELNQALQAFEEDPAVGAIVLTGGEKVFAAGADIKEMQSL 106
Query: 79 -FKGDVKDVETDTVAQMERCRKPIIGAISGFAVTAGFEIALACDVLVAAKGAKF 131
F+ Q+ R +KP+I A++G+A+ G E+A+ CD++ A + A+F
Sbjct: 107 TFQNCYSGGFLSHWDQLTRVKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQF 160
>sp|P14604|ECHM_RAT Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus GN=Echs1
PE=1 SV=1
Length = 290
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 19 IAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGRAFCSGVDLTSAED- 77
+ + +NRPK+LN+L ++ ++ QA ++ ++D +V I+L+G +AF +G D+ ++
Sbjct: 47 VGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNR 106
Query: 78 VFKGDVKDVETDTVAQMERCRKPIIGAISGFAVTAGFEIALACDVLVAAKGAKF 131
F+ + R +KP+I A++G+A+ G E+A+ CD++ A + A+F
Sbjct: 107 TFQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQF 160
>sp|P30084|ECHM_HUMAN Enoyl-CoA hydratase, mitochondrial OS=Homo sapiens GN=ECHS1 PE=1
SV=4
Length = 290
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 19 IAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGRAFCSGVDLTSAEDV 78
+ + +NRPK+LN+L ++ ++ QA K+ ++D +V I+L+G +AF +G D+ +++
Sbjct: 47 VGLIQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLTGGDKAFAAGADIKEMQNL 106
Query: 79 -FKGDVKDVETDTVAQMERCRKPIIGAISGFAVTAGFEIALACDVLVAAKGAKF 131
F+ + + +KP+I A++G+A G E+A+ CD++ A + A+F
Sbjct: 107 SFQDCYSSKFLKHWDHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQF 160
>sp|Q8GYN9|MENB_ARATH 1,4-Dihydroxy-2-naphthoyl-CoA synthase, peroxisomal OS=Arabidopsis
thaliana GN=MENB PE=1 SV=2
Length = 337
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 64/122 (52%), Gaps = 5/122 (4%)
Query: 18 GIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSG-RAFCSGVDLTSAE 76
GIA +TINRP+ N+ + ++ +AF D SV VIIL+G G +AFCSG D
Sbjct: 86 GIAKITINRPERRNAFRPQTVKELMRAFNDARDDSSVGVIILTGKGTKAFCSGGDQALRT 145
Query: 77 DVFKGDVKDVET----DTVAQMERCRKPIIGAISGFAVTAGFEIALACDVLVAAKGAKFI 132
D DV D Q+ R KP+I ++G+AV G + + CD+ +AA A F
Sbjct: 146 QDGYADPNDVGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAIFG 205
Query: 133 DT 134
T
Sbjct: 206 QT 207
>sp|Q5R646|ECHM_PONAB Enoyl-CoA hydratase, mitochondrial OS=Pongo abelii GN=ECHS1 PE=2
SV=1
Length = 290
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
Query: 19 IAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGRAFCSGVDLTSAEDV 78
+ + +NRPK+LN+L ++ ++ QA K ++D +V I+L+G +AF +G D+ +++
Sbjct: 47 VGLIQLNRPKALNALCDGLIDELNQALKIFEEDPAVGAIVLTGGDKAFAAGADIKEMQNL 106
Query: 79 -FKGDVKDVETDTVAQMERCRKPIIGAISGFAVTAGFEIALACDVLVAAKGAKF 131
F+ + + +KP+I A++G+A G E+A+ CD++ A + A+F
Sbjct: 107 SFQDCYSSKFLKHWDHLTQIKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQF 160
>sp|Q9CLV5|MENB_PASMU 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Pasteurella multocida
(strain Pm70) GN=menB PE=3 SV=1
Length = 285
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 10/145 (6%)
Query: 3 QTKSENL--ILVTRDPMGIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILS 60
Q SE IL + GIA +TINRP+ N+ + +M QAF DE + VI+L+
Sbjct: 16 QDHSEGYTDILYHKSLDGIAKITINRPEVRNAFRPQTVKEMIQAFADARFDEQIGVIVLT 75
Query: 61 GSG-RAFCSGVDLTSAEDVFKG--DVKDVETDTVAQMER----CRKPIIGAISGFAVTAG 113
G G +AFCSG D D + G D V V +R C KP++ ++G+A+ G
Sbjct: 76 GQGEKAFCSGGDQKVRGD-YGGYQDESGVHHLNVLDFQRDIRTCPKPVVAMVAGYAIGGG 134
Query: 114 FEIALACDVLVAAKGAKFIDTHARL 138
+ + CD+ +AA A F T ++
Sbjct: 135 HVLHMICDLTIAADNAIFGQTGPKV 159
>sp|Q50130|ECHA6_MYCLE Probable enoyl-CoA hydratase echA6 OS=Mycobacterium leprae (strain
TN) GN=echA6 PE=3 SV=1
Length = 247
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Query: 18 GIAYVTINRPKSLNSLTRSMMADMAQAFK---SLDKDESVLVIILSGSGRAFCSGVDLTS 74
G+ + + RP+ N+L ++ + +A + S D + S VI+L+G G FC+G DL+
Sbjct: 9 GVMTIELQRPERRNALNSQLIEKLREAVQKASSADSEVSTRVIVLTGQGTVFCAGADLSG 68
Query: 75 AEDVFKGDVKDVETDTVAQMERCRKPIIGAISGFAVTAGFEIALACDVLVAAKGAKF 131
D F D D + M+ P+IGAI+G A+ AG ++A+ CD+ V A A F
Sbjct: 69 --DAFAADYPDRLIELHRVMDAVPMPVIGAINGPAIGAGLQLAMQCDLRVVAPDAYF 123
>sp|P64014|ECHA6_MYCTU Probable enoyl-CoA hydratase echA6 OS=Mycobacterium tuberculosis
GN=echA6 PE=1 SV=1
Length = 243
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 22 VTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGRAFCSGVDLTSAEDVFKG 81
+ + RP+ N+L ++ ++ QA + D S I+L+G G AFC+G DL+ D F
Sbjct: 13 IELQRPERRNALNSQLVEELTQAIRKAG-DGSARAIVLTGQGTAFCAGADLSG--DAFAA 69
Query: 82 DVKDVETDTVAQMERCRKPIIGAISGFAVTAGFEIALACDVLVAAKGAKF 131
D D + M+ P++GAI+G A+ AG ++A+ CD+ V A A F
Sbjct: 70 DYPDRLIELHKAMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFF 119
>sp|P64015|ECHA6_MYCBO Probable enoyl-CoA hydratase echA6 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=echA6 PE=3 SV=1
Length = 243
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 22 VTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGRAFCSGVDLTSAEDVFKG 81
+ + RP+ N+L ++ ++ QA + D S I+L+G G AFC+G DL+ D F
Sbjct: 13 IELQRPERRNALNSQLVEELTQAIRKAG-DGSARAIVLTGQGTAFCAGADLSG--DAFAA 69
Query: 82 DVKDVETDTVAQMERCRKPIIGAISGFAVTAGFEIALACDVLVAAKGAKF 131
D D + M+ P++GAI+G A+ AG ++A+ CD+ V A A F
Sbjct: 70 DYPDRLIELHKAMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFF 119
>sp|P44960|MENB_HAEIN 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=menB PE=3
SV=1
Length = 285
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 69/129 (53%), Gaps = 10/129 (7%)
Query: 18 GIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSG-RAFCSGVDLTSAE 76
GIA +TINRP+ N+ + +M AF DE++ VI+L+G G +AFCSG D
Sbjct: 33 GIAKITINRPEVRNAFRPQTVKEMMTAFSDARFDENIGVIVLTGEGEKAFCSGGDQKVRG 92
Query: 77 DVFKGDVKD---VETDTVAQMER----CRKPIIGAISGFAVTAGFEIALACDVLVAAKGA 129
D G KD V V +R C KP++ ++G+A+ G + + CD+ +AA+ A
Sbjct: 93 DY--GGYKDDSGVHHLNVLDFQRDIRSCPKPVVAMVAGYAIGGGHVLHMLCDLTIAAENA 150
Query: 130 KFIDTHARL 138
F T ++
Sbjct: 151 IFGQTGPKV 159
>sp|O34893|YNGF_BACSU Putative enoyl-CoA hydratase/isomerase YngF OS=Bacillus subtilis
(strain 168) GN=yngF PE=3 SV=1
Length = 260
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 74/125 (59%), Gaps = 6/125 (4%)
Query: 10 ILVTRDPMGIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSG-RAFCS 68
IL T +A +T+NRP++ N+L+ M+ ++ + ++ + ++ +IL+G+G +AFC+
Sbjct: 5 ILFTVKNEHMALITLNRPQAANALSAEMLRNLQMIIQEIEFNSNIRCVILTGTGEKAFCA 64
Query: 69 GVDLTS----AEDVFKGDVKDVETDTVAQMERCRKPIIGAISGFAVTAGFEIALACDVLV 124
G DL ED V ++ T A ++ +P+I AI+G A+ G E+ALACD+ +
Sbjct: 65 GADLKERIKLKEDQVLESVSLIQR-TAALLDALPQPVIAAINGSALGGGLELALACDLRI 123
Query: 125 AAKGA 129
A + A
Sbjct: 124 ATEAA 128
>sp|P23966|MENB_BACSU 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Bacillus subtilis (strain
168) GN=menB PE=1 SV=2
Length = 271
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 70/127 (55%), Gaps = 7/127 (5%)
Query: 18 GIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSG-RAFCSGVDL-TSA 75
GIA +TINRP+ N+ T +A+M AF D++V VI+L+G+G +AFCSG D
Sbjct: 20 GIAKITINRPEVHNAFTPKTVAEMIDAFADARDDQNVGVIVLAGAGDKAFCSGGDQKVRG 79
Query: 76 EDVFKGDVKDVETDTVAQMERC----RKPIIGAISGFAVTAGFEIALACDVLVAAKGAKF 131
+ GD + V ++R KP++ +SG+A+ G + + CD+ +AA A F
Sbjct: 80 HGGYVGD-DQIPRLNVLDLQRLIRVIPKPVVAMVSGYAIGGGHVLHIVCDLTIAADNAIF 138
Query: 132 IDTHARL 138
T ++
Sbjct: 139 GQTGPKV 145
>sp|Q13011|ECH1_HUMAN Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Homo
sapiens GN=ECH1 PE=1 SV=2
Length = 328
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 14/134 (10%)
Query: 12 VTRDPMGIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGRAFCSGVD 71
VT + +V +NRP N++ + +M + F + +D +++SG+G+ F +G+D
Sbjct: 60 VTSAQKHVLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGID 119
Query: 72 LTS-AEDVF--KGD--------VKDVET---DTVAQMERCRKPIIGAISGFAVTAGFEIA 117
L A D+ KGD ++D+ T +T +ERC KP+I A+ G + G ++
Sbjct: 120 LMDMASDILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLV 179
Query: 118 LACDVLVAAKGAKF 131
ACD+ A+ A F
Sbjct: 180 TACDIRYCAQDAFF 193
>sp|Q869N6|CRTL_DICDI 3-hydroxybutyryl-CoA dehydratase-like protein, mitochondrial
OS=Dictyostelium discoideum GN=DDB_G0271866 PE=3 SV=1
Length = 299
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 11 LVTRDPMGIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGRAFCSGV 70
LV GI V +N+PK LN+LT M D + +L +D+ + ++L+G G+AF +G
Sbjct: 37 LVNGKYTGIQIVKLNKPKQLNALTFEMGVDYKKVVDTLAEDKDLKCVVLTGEGKAFSAGG 96
Query: 71 DLTSAEDVFKGDVKDVETDTVAQMERCRK----------PIIGAISGFAVTAGFEIALAC 120
DL D KD + MER + PII AI+G A+ AGF +ALA
Sbjct: 97 DL----DFLIERTKDTPENNQRIMERFYRTFLYIRSLPVPIISAINGAAIGAGFCLALAT 152
Query: 121 DVLVAAKGA 129
D+ V + A
Sbjct: 153 DIRVVSNKA 161
>sp|P0ABU0|MENB_ECOLI 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Escherichia coli (strain
K12) GN=menB PE=1 SV=1
Length = 285
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 70/127 (55%), Gaps = 6/127 (4%)
Query: 18 GIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSG-RAFCSGVDLTSAE 76
GIA +TINRP+ N+ + +M QA D+++ VIIL+G+G +AFCSG D
Sbjct: 33 GIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRG 92
Query: 77 DV--FKGD--VKDVET-DTVAQMERCRKPIIGAISGFAVTAGFEIALACDVLVAAKGAKF 131
D +K D V + D Q+ C KP++ ++G+++ G + + CD+ +AA A F
Sbjct: 93 DYGGYKDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIF 152
Query: 132 IDTHARL 138
T ++
Sbjct: 153 GQTGPKV 159
>sp|P0ABU1|MENB_ECOL6 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=menB PE=3 SV=1
Length = 285
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 70/127 (55%), Gaps = 6/127 (4%)
Query: 18 GIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSG-RAFCSGVDLTSAE 76
GIA +TINRP+ N+ + +M QA D+++ VIIL+G+G +AFCSG D
Sbjct: 33 GIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRG 92
Query: 77 DV--FKGD--VKDVET-DTVAQMERCRKPIIGAISGFAVTAGFEIALACDVLVAAKGAKF 131
D +K D V + D Q+ C KP++ ++G+++ G + + CD+ +AA A F
Sbjct: 93 DYGGYKDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIF 152
Query: 132 IDTHARL 138
T ++
Sbjct: 153 GQTGPKV 159
>sp|Q8CPQ4|MENB_STAES 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=menB PE=3 SV=1
Length = 272
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 7/127 (5%)
Query: 18 GIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSG-RAFCSGVDLTS-A 75
GIA VTINRP+ N+ T +A+M AF D++V VI+L+G G +AFCSG D
Sbjct: 21 GIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDKAFCSGGDQKKRG 80
Query: 76 EDVFKGDVKDVETDTVAQMERC----RKPIIGAISGFAVTAGFEIALACDVLVAAKGAKF 131
+ G+ D+ V ++R KP+I + G+A+ G + + CD+ +AA A F
Sbjct: 81 HGGYVGE-DDIPRLNVLDLQRLIRVIPKPVIAMVRGYAIGGGNVLNVVCDLTIAADNAIF 139
Query: 132 IDTHARL 138
T ++
Sbjct: 140 GQTGPKV 146
>sp|Q5HQC3|MENB_STAEQ 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=menB PE=3
SV=1
Length = 272
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 7/127 (5%)
Query: 18 GIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSG-RAFCSGVDLTS-A 75
GIA VTINRP+ N+ T +A+M AF D++V VI+L+G G +AFCSG D
Sbjct: 21 GIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDKAFCSGGDQKKRG 80
Query: 76 EDVFKGDVKDVETDTVAQMERC----RKPIIGAISGFAVTAGFEIALACDVLVAAKGAKF 131
+ G+ D+ V ++R KP+I + G+A+ G + + CD+ +AA A F
Sbjct: 81 HGGYVGE-DDIPRLNVLDLQRLIRVIPKPVIAMVRGYAIGGGNVLNVVCDLTIAADNAIF 139
Query: 132 IDTHARL 138
T ++
Sbjct: 140 GQTGPKV 146
>sp|Q5RFG0|ECH1_PONAB Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Pongo
abelii GN=ECH1 PE=2 SV=1
Length = 328
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 14/134 (10%)
Query: 12 VTRDPMGIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGRAFCSGVD 71
VT + +V +NRP N++ + +M + F + +D +++SG+G+ F +GVD
Sbjct: 60 VTSAQKHVLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGVD 119
Query: 72 LTS-AEDVF--KGD--------VKDVET---DTVAQMERCRKPIIGAISGFAVTAGFEIA 117
L A D+ KGD ++D+ T +T +E+C KP+I A+ G + G ++
Sbjct: 120 LMDMASDILQPKGDDVARISWYLRDIITRYQETFNVIEKCPKPVIAAVHGGCIGGGVDLV 179
Query: 118 LACDVLVAAKGAKF 131
ACD+ A+ A F
Sbjct: 180 TACDIRYCAQDAFF 193
>sp|Q7CQ56|MENB_SALTY 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=menB PE=1 SV=1
Length = 285
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 16/132 (12%)
Query: 18 GIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSG-RAFCSGVDLTSAE 76
GIA +TINRP+ N+ + +M QA D++V VIIL+G G +AFC+G D
Sbjct: 33 GIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNVGVIILTGEGDKAFCAGGDQK--- 89
Query: 77 DVFKGDVKDVETDT----------VAQMERCRKPIIGAISGFAVTAGFEIALACDVLVAA 126
+GD + D+ Q+ C KP++ ++G+++ G + + CD+ +AA
Sbjct: 90 --VRGDYGGYQDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAA 147
Query: 127 KGAKFIDTHARL 138
+ A F T ++
Sbjct: 148 ENAIFGQTGPKV 159
>sp|Q62651|ECH1_RAT Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial
OS=Rattus norvegicus GN=Ech1 PE=1 SV=2
Length = 327
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Query: 10 ILVTRDPMGIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGRAFCSG 69
I VT + +V +NRP+ N++ R+ ++ + F+ + KD +++SG+G+ F SG
Sbjct: 57 IQVTSAQKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSG 116
Query: 70 VDLTS-AEDVFKGDVKDV-------------ETDTVAQMERCRKPIIGAISGFAVTAGFE 115
+DL A D+ + DV T +E+C KP+I AI G + G +
Sbjct: 117 IDLMDMASDILQPPGDDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVD 176
Query: 116 IALACDVLVAAKGAKF 131
+ ACD+ + A F
Sbjct: 177 LISACDIRYCTQDAFF 192
>sp|Q4L549|MENB_STAHJ 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=menB PE=3 SV=1
Length = 272
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 15/131 (11%)
Query: 18 GIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSG-RAFCSGVDLTSAE 76
GIA VTINRP+ N+ T +A+M AF D+++ VIIL+G G +AFCSG D
Sbjct: 21 GIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNISVIILTGEGDKAFCSGGDQKK-- 78
Query: 77 DVFKGDVKDVETDTVAQ-----MERC----RKPIIGAISGFAVTAGFEIALACDVLVAAK 127
+G V D + + ++R KP+I + G+A+ G + + CD+ +AA
Sbjct: 79 ---RGHGGYVGEDQIPRLNVLDLQRLIRVIPKPVIAMVRGYAIGGGNVLNVVCDLTIAAD 135
Query: 128 GAKFIDTHARL 138
A F T ++
Sbjct: 136 NAIFGQTGPKV 146
>sp|O35459|ECH1_MOUSE Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Mus
musculus GN=Ech1 PE=2 SV=1
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Query: 10 ILVTRDPMGIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGRAFCSG 69
I VT + +V +NRP+ N++ R+ ++ + F+ + KD +++SG+G+ F SG
Sbjct: 57 IQVTSAQKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSG 116
Query: 70 VDL---------TSAEDV-----FKGDVKDVETDTVAQMERCRKPIIGAISGFAVTAGFE 115
+DL S +D + D+ T +E+C KP+I AI G + G +
Sbjct: 117 IDLMDMASELMQPSGDDAARIAWYLRDLISKYQKTFTVIEKCPKPVIAAIHGGCIGGGVD 176
Query: 116 IALACDVLVAAKGAKF 131
+ ACD+ + A F
Sbjct: 177 LVSACDIRYCTQDAFF 192
>sp|Q8GB17|CAID_PROSL Carnitinyl-CoA dehydratase OS=Proteus sp. (strain LE138) GN=caiD
PE=1 SV=3
Length = 261
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 76/139 (54%), Gaps = 12/139 (8%)
Query: 6 SENLILVTRDPMGIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSG-R 64
S++L L TR + + ++RPK+ N++ +M + F D S+ V I++G+G R
Sbjct: 2 SQSLHLTTRG--SVLEIILDRPKA-NAIDAKTSHEMGEVFMRFRDDPSLRVAIITGAGER 58
Query: 65 AFCSGVDLTSAEDVFKGDVKDVETDT-----VAQMERCRKPIIGAISGFAVTAGFEIALA 119
FC+G DL +A + G+ D + + ++ KP+I AI+G+A GFE+ALA
Sbjct: 59 FFCAGWDLKAAAE---GEAPDADFGAGGFAGLTELFDLNKPVIAAINGYAFGGGFELALA 115
Query: 120 CDVLVAAKGAKFIDTHARL 138
D+++ + A F A+L
Sbjct: 116 ADMIICSDNASFALPEAQL 134
>sp|B4EY26|CAID_PROMH Carnitinyl-CoA dehydratase OS=Proteus mirabilis (strain HI4320)
GN=caiD PE=3 SV=1
Length = 261
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 76/139 (54%), Gaps = 12/139 (8%)
Query: 6 SENLILVTRDPMGIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSG-R 64
S++L L TR + + ++RPK+ N++ +M + F D S+ V I++G+G R
Sbjct: 2 SQSLHLTTRG--SVLEIILDRPKA-NAIDAKTSHEMGEVFMRFRDDPSLRVAIITGAGER 58
Query: 65 AFCSGVDLTSAEDVFKGDVKDVETDT-----VAQMERCRKPIIGAISGFAVTAGFEIALA 119
FC+G DL +A + G+ D + + ++ KP+I AI+G+A GFE+ALA
Sbjct: 59 FFCAGWDLKAAAE---GEAPDADFGAGGFAGLTELFDLNKPVIAAINGYAFGGGFELALA 115
Query: 120 CDVLVAAKGAKFIDTHARL 138
D+++ + A F A+L
Sbjct: 116 ADMIICSDNASFALPEAQL 134
>sp|Q6GI37|MENB_STAAR 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain MRSA252) GN=menB PE=3 SV=1
Length = 273
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 15/131 (11%)
Query: 18 GIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGR-AFCSGVDLTSAE 76
GIA VTINRP+ N+ T +A+M AF D++V VI+L+G G AFCSG D
Sbjct: 22 GIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKK-- 79
Query: 77 DVFKGDVKDVETDTVAQ-----MERC----RKPIIGAISGFAVTAGFEIALACDVLVAAK 127
+G V D + + ++R KP+I + G+AV G + + CD+ +AA
Sbjct: 80 ---RGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAAD 136
Query: 128 GAKFIDTHARL 138
A F T ++
Sbjct: 137 NAIFGQTGPKV 147
>sp|Q5HH38|MENB_STAAC 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain COL) GN=menB PE=1 SV=1
Length = 273
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 15/131 (11%)
Query: 18 GIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGR-AFCSGVDLTSAE 76
GIA VTINRP+ N+ T +A+M AF D++V VI+L+G G AFCSG D
Sbjct: 22 GIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKK-- 79
Query: 77 DVFKGDVKDVETDTVAQ-----MERC----RKPIIGAISGFAVTAGFEIALACDVLVAAK 127
+G V D + + ++R KP+I + G+AV G + + CD+ +AA
Sbjct: 80 ---RGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAAD 136
Query: 128 GAKFIDTHARL 138
A F T ++
Sbjct: 137 NAIFGQTGPKV 147
>sp|Q7A6A9|MENB_STAAN 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain N315) GN=menB PE=1 SV=1
Length = 273
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 15/131 (11%)
Query: 18 GIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGR-AFCSGVDLTSAE 76
GIA VTINRP+ N+ T +A+M AF D++V VI+L+G G AFCSG D
Sbjct: 22 GIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKK-- 79
Query: 77 DVFKGDVKDVETDTVAQ-----MERC----RKPIIGAISGFAVTAGFEIALACDVLVAAK 127
+G V D + + ++R KP+I + G+AV G + + CD+ +AA
Sbjct: 80 ---RGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAAD 136
Query: 128 GAKFIDTHARL 138
A F T ++
Sbjct: 137 NAIFGQTGPKV 147
>sp|Q99V48|MENB_STAAM 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=menB PE=1 SV=1
Length = 273
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 15/131 (11%)
Query: 18 GIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGR-AFCSGVDLTSAE 76
GIA VTINRP+ N+ T +A+M AF D++V VI+L+G G AFCSG D
Sbjct: 22 GIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKK-- 79
Query: 77 DVFKGDVKDVETDTVAQ-----MERC----RKPIIGAISGFAVTAGFEIALACDVLVAAK 127
+G V D + + ++R KP+I + G+AV G + + CD+ +AA
Sbjct: 80 ---RGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAAD 136
Query: 128 GAKFIDTHARL 138
A F T ++
Sbjct: 137 NAIFGQTGPKV 147
>sp|Q49WG8|MENB_STAS1 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=menB PE=3 SV=1
Length = 272
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
Query: 18 GIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSG-RAFCSGVDL-TSA 75
GIA VTINRP+ N+ T + + +M AF D+ + VIIL+G G +AFCSG D
Sbjct: 21 GIAKVTINRPEVRNAFTPNTVQEMIDAFTRARDDQRISVIILTGEGDKAFCSGGDQKVRG 80
Query: 76 EDVFKGDVKDVETDTVAQMERC----RKPIIGAISGFAVTAGFEIALACDVLVAAKGAKF 131
+ GD + V ++R KP++ + G+A+ G + + CD+ +AA A F
Sbjct: 81 HGGYVGD-DQIPRLNVLDLQRLIRVIPKPVVAMVRGYAIGGGNVLNVVCDLTIAADNAIF 139
Query: 132 IDTHARL 138
T ++
Sbjct: 140 GQTGPKV 146
>sp|P77467|PAAG_ECOLI 1,2-epoxyphenylacetyl-CoA isomerase OS=Escherichia coli (strain
K12) GN=paaG PE=1 SV=1
Length = 262
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 74/128 (57%), Gaps = 7/128 (5%)
Query: 18 GIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGRAFCSGVDLTSAED 77
G+ +T+NRP+ LNS M A +A+ K +++D+++ ++L+G+GR FC+G DL
Sbjct: 12 GVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNV 71
Query: 78 VFKGDVKDV-------ETDTVAQMERCRKPIIGAISGFAVTAGFEIALACDVLVAAKGAK 130
G D+ V ++ + KP+I A++G A AG +AL D+++AA+ AK
Sbjct: 72 DPTGPAPDLGMSVERFYNPLVRRLAKLPKPVICAVNGVAAGAGATLALGGDIVIAARSAK 131
Query: 131 FIDTHARL 138
F+ ++L
Sbjct: 132 FVMAFSKL 139
>sp|Q8NXA0|MENB_STAAW 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain MW2) GN=menB PE=3 SV=1
Length = 273
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 15/131 (11%)
Query: 18 GIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGR-AFCSGVDLTSAE 76
GIA VTINRP+ N+ T +++M AF D++V VI+L+G G AFCSG D
Sbjct: 22 GIAKVTINRPEVRNAFTPKTVSEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKK-- 79
Query: 77 DVFKGDVKDVETDTVAQ-----MERC----RKPIIGAISGFAVTAGFEIALACDVLVAAK 127
+G V D + + ++R KP+I + G+AV G + + CD+ +AA
Sbjct: 80 ---RGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAAD 136
Query: 128 GAKFIDTHARL 138
A F T ++
Sbjct: 137 NAIFGQTGPKV 147
>sp|Q6GAG7|MENB_STAAS 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain MSSA476) GN=menB PE=3 SV=1
Length = 273
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 15/131 (11%)
Query: 18 GIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGR-AFCSGVDLTSAE 76
GIA VTINRP+ N+ T +++M AF D++V VI+L+G G AFCSG D
Sbjct: 22 GIAKVTINRPEVRNAFTPKTVSEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKK-- 79
Query: 77 DVFKGDVKDVETDTVAQ-----MERC----RKPIIGAISGFAVTAGFEIALACDVLVAAK 127
+G V D + + ++R KP+I + G+AV G + + CD+ +AA
Sbjct: 80 ---RGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAAD 136
Query: 128 GAKFIDTHARL 138
A F T ++
Sbjct: 137 NAIFGQTGPKV 147
>sp|Q2TBT3|ECHD2_BOVIN Enoyl-CoA hydratase domain-containing protein 2, mitochondrial
OS=Bos taurus GN=ECHDC2 PE=2 SV=1
Length = 296
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 12/120 (10%)
Query: 18 GIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIIL-SGSGRAFCSGVDLTSAE 76
GIA + +NRP + N+L ++ + +A L +D V V+I SG FC+G DL E
Sbjct: 45 GIAEILMNRPSARNALGNVFVSQLLEALAQLREDRQVRVLIFRSGVKGVFCAGADLKERE 104
Query: 77 DVFKGDV-------KDVETDTVAQMERCRKPIIGAISGFAVTAGFEIALACDVLVAAKGA 129
+ + +V + + T+ A P I A+ GFA+ G E+ALACD+ VAA A
Sbjct: 105 QMSEAEVGLFVQRLRGLMTEIAA----FPAPTIAAMDGFALGGGLELALACDLRVAASSA 160
>sp|B5RGA4|CAID_SALG2 Carnitinyl-CoA dehydratase OS=Salmonella gallinarum (strain 287/91
/ NCTC 13346) GN=caiD PE=3 SV=1
Length = 261
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 12/139 (8%)
Query: 6 SENLILVTRDPMGIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGRA 65
SE+L L P I +T++RPK+ N++ M +AF + D + V I++G G
Sbjct: 2 SESLHLTRNGP--ILEITLDRPKA-NAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEK 58
Query: 66 FCS-GVDLTSAEDVFKGDVKDVETDT-----VAQMERCRKPIIGAISGFAVTAGFEIALA 119
F S G DL +A + G+ D + + + ++ KP+I A++G+A GFE+ALA
Sbjct: 59 FFSAGWDLKAAAE---GEAPDADFGSGGFAGLTEIFDLDKPVIAAVNGYAFGGGFELALA 115
Query: 120 CDVLVAAKGAKFIDTHARL 138
D +V A+ A F A+L
Sbjct: 116 ADFIVCAENASFALPEAKL 134
>sp|B5R1Q9|CAID_SALEP Carnitinyl-CoA dehydratase OS=Salmonella enteritidis PT4 (strain
P125109) GN=caiD PE=3 SV=1
Length = 261
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 12/139 (8%)
Query: 6 SENLILVTRDPMGIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGRA 65
SE+L L P I +T++RPK+ N++ M +AF + D + V I++G G
Sbjct: 2 SESLHLTRNGP--ILEITLDRPKA-NAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEK 58
Query: 66 FCS-GVDLTSAEDVFKGDVKDVETDT-----VAQMERCRKPIIGAISGFAVTAGFEIALA 119
F S G DL +A + G+ D + + + ++ KP+I A++G+A GFE+ALA
Sbjct: 59 FFSAGWDLKAAAE---GEAPDADFGSGGFAGLTEIFDLDKPVIAAVNGYAFGGGFELALA 115
Query: 120 CDVLVAAKGAKFIDTHARL 138
D +V A+ A F A+L
Sbjct: 116 ADFIVCAENASFALPEAKL 134
>sp|Q3TLP5|ECHD2_MOUSE Enoyl-CoA hydratase domain-containing protein 2, mitochondrial
OS=Mus musculus GN=Echdc2 PE=2 SV=2
Length = 296
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 18/123 (14%)
Query: 18 GIAYVTINRPKSLNSLTRSMMADMAQAFKSLDKDESVLVIILSGSGRA-FCSGVDLTSAE 76
GI + +NRP + N+L ++++ +A L +D+ V V++ + + FC+G DL E
Sbjct: 45 GITEILMNRPNARNALGNVFVSELLEALAQLREDQQVRVLLFRSAVKGVFCAGADLKERE 104
Query: 77 DVFKGDVKDVETDTVAQMERCRK----------PIIGAISGFAVTAGFEIALACDVLVAA 126
+ DVE T Q R R P I A+ GFA+ G E+ALACD+ +AA
Sbjct: 105 QM-----SDVEVGTFVQ--RLRGLMSEIAAFPVPTIAAMDGFALGGGLELALACDLRIAA 157
Query: 127 KGA 129
A
Sbjct: 158 SSA 160
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.133 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,210,787
Number of Sequences: 539616
Number of extensions: 1620944
Number of successful extensions: 5123
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 255
Number of HSP's successfully gapped in prelim test: 115
Number of HSP's that attempted gapping in prelim test: 4709
Number of HSP's gapped (non-prelim): 371
length of query: 145
length of database: 191,569,459
effective HSP length: 106
effective length of query: 39
effective length of database: 134,370,163
effective search space: 5240436357
effective search space used: 5240436357
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)