BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032208
(145 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P35685|RL7A_ORYSJ 60S ribosomal protein L7a OS=Oryza sativa subsp. japonica GN=RPL7A
PE=2 SV=1
Length = 258
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/142 (89%), Positives = 136/142 (95%), Gaps = 1/142 (0%)
Query: 1 MAPKRGGKVAAAPAKKKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAIRIQRQ 60
MAPKRGG+ A PAKKK EKV NPLFEKRPKQFGIGGALPPKKDLHR+VKWPK +RIQRQ
Sbjct: 1 MAPKRGGR-APVPAKKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQ 59
Query: 61 RRILRQRLKVPPALNQFTKTLDKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGKT 120
RRIL+QRLKVPPALNQFT+TLDKNLA++LFK+LLKYRPED+AAKKERLLKRAQAEAEGKT
Sbjct: 60 RRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKT 119
Query: 121 VEAKKPIVVKYGLNHVTYLIEQ 142
VEAKKPIVVKYGLNHVTYLIEQ
Sbjct: 120 VEAKKPIVVKYGLNHVTYLIEQ 141
>sp|Q9LZH9|RL7A2_ARATH 60S ribosomal protein L7a-2 OS=Arabidopsis thaliana GN=RPL7AB PE=1
SV=1
Length = 256
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/142 (84%), Positives = 133/142 (93%), Gaps = 3/142 (2%)
Query: 1 MAPKRGGKVAAAPAKKKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAIRIQRQ 60
MAPK+G KVA+ KKKPEKV NPLFE+RPKQFGIGGALPPKKDL RY+KWPK+IR+QRQ
Sbjct: 1 MAPKKGVKVAS---KKKPEKVTNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQ 57
Query: 61 RRILRQRLKVPPALNQFTKTLDKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGKT 120
+RIL+QRLKVPPALNQFTKTLDKNLA+SLFK+LLKYRPED+AAKKERLL +AQAEAEGK
Sbjct: 58 KRILKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEDKAAKKERLLNKAQAEAEGKP 117
Query: 121 VEAKKPIVVKYGLNHVTYLIEQ 142
E+KKPIVVKYGLNHVTYLIEQ
Sbjct: 118 AESKKPIVVKYGLNHVTYLIEQ 139
>sp|P49692|RL7A1_ARATH 60S ribosomal protein L7a-1 OS=Arabidopsis thaliana GN=RPL7AA PE=1
SV=2
Length = 257
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/124 (87%), Positives = 120/124 (96%)
Query: 19 EKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAIRIQRQRRILRQRLKVPPALNQFT 78
EKV NPLFE+RPKQFGIGGALPPKKDL RY+KWPK+IR+QRQ+RIL+QRLKVPPALNQFT
Sbjct: 17 EKVSNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKRILKQRLKVPPALNQFT 76
Query: 79 KTLDKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTY 138
KTLDKNLA+SLFK+LLKYRPED+AAKKERL+K+AQAEAEGK E+KKPIVVKYGLNHVTY
Sbjct: 77 KTLDKNLATSLFKVLLKYRPEDKAAKKERLVKKAQAEAEGKPSESKKPIVVKYGLNHVTY 136
Query: 139 LIEQ 142
LIEQ
Sbjct: 137 LIEQ 140
>sp|P0DJ14|RL7A_TETTH 60S ribosomal protein L7a OS=Tetrahymena thermophila GN=RPL7A PE=1
SV=1
Length = 255
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 73/119 (61%), Positives = 97/119 (81%)
Query: 23 NPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAIRIQRQRRILRQRLKVPPALNQFTKTLD 82
NPLF+ +P+ F +GG + PK+DL R+V+WP+ I +QRQ+R+L QRLKVPP ++QFTKTLD
Sbjct: 19 NPLFQAKPRSFRVGGDIQPKRDLTRFVRWPRYITLQRQKRVLLQRLKVPPQIHQFTKTLD 78
Query: 83 KNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIE 141
KN +S+LFKLL Y PE A KK+RL+ +A+A+ +GK VE KKPIV+KYGLNH+T LIE
Sbjct: 79 KNQSSNLFKLLASYAPEKPAEKKQRLVAQAEAKKDGKQVETKKPIVLKYGLNHITTLIE 137
>sp|O13672|RL8_SCHPO 60S ribosomal protein L8 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rpl8 PE=1 SV=3
Length = 259
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/145 (59%), Positives = 105/145 (72%), Gaps = 5/145 (3%)
Query: 1 MAPKRGGKVAAAP-AKKKPEKVV-NPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAIRIQ 58
MAPK KVA +P A+ K K NPLF RP+ FGIG + PK+DL R+VKWP+ IR+Q
Sbjct: 1 MAPK-SKKVAPSPFAQPKAAKTTKNPLFVSRPRSFGIGQDIQPKRDLSRFVKWPEYIRLQ 59
Query: 59 RQRRILRQRLKVPPALNQFTKTLDKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEG 118
R+R+IL RLKVPPA+ QF KTLDKN A+ +FKLL KYRPE A KK+RL+ A+A A G
Sbjct: 60 RRRKILNLRLKVPPAIAQFQKTLDKNTATQVFKLLNKYRPETAAEKKQRLVAEAEAVANG 119
Query: 119 KTVE--AKKPIVVKYGLNHVTYLIE 141
K+ + +KKP VKYGLNHV LIE
Sbjct: 120 KSAQDVSKKPYNVKYGLNHVVALIE 144
>sp|Q2TBQ5|RL7A_BOVIN 60S ribosomal protein L7a OS=Bos taurus GN=RPL7A PE=2 SV=3
Length = 266
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 98/129 (75%), Gaps = 1/129 (0%)
Query: 15 KKKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAIRIQRQRRILRQRLKVPPAL 74
K++ +KVVNPLFEKRPK FGIG + PK+DL R+VKWP+ IR+QRQR IL +RLKVPPA+
Sbjct: 21 KQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAI 80
Query: 75 NQFTKTLDKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGK-TVEAKKPIVVKYGL 133
NQFT+ LD+ A+ L KL KYRPE + KK+RLL RA+ +A GK V K+P V++ G+
Sbjct: 81 NQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGV 140
Query: 134 NHVTYLIEQ 142
N VT L+E
Sbjct: 141 NTVTTLVEN 149
>sp|P12970|RL7A_MOUSE 60S ribosomal protein L7a OS=Mus musculus GN=Rpl7a PE=2 SV=2
Length = 266
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 98/129 (75%), Gaps = 1/129 (0%)
Query: 15 KKKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAIRIQRQRRILRQRLKVPPAL 74
K++ +KVVNPLFEKRPK FGIG + PK+DL R+VKWP+ IR+QRQR IL +RLKVPPA+
Sbjct: 21 KQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAI 80
Query: 75 NQFTKTLDKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGK-TVEAKKPIVVKYGL 133
NQFT+ LD+ A+ L KL KYRPE + KK+RLL RA+ +A GK V K+P V++ G+
Sbjct: 81 NQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGV 140
Query: 134 NHVTYLIEQ 142
N VT L+E
Sbjct: 141 NTVTTLVEN 149
>sp|P62425|RL7A_RAT 60S ribosomal protein L7a OS=Rattus norvegicus GN=Rpl7a PE=1 SV=2
Length = 266
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 98/129 (75%), Gaps = 1/129 (0%)
Query: 15 KKKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAIRIQRQRRILRQRLKVPPAL 74
K++ +KVVNPLFEKRPK FGIG + PK+DL R+VKWP+ IR+QRQR IL +RLKVPPA+
Sbjct: 21 KQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAI 80
Query: 75 NQFTKTLDKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGK-TVEAKKPIVVKYGL 133
NQFT+ LD+ A+ L KL KYRPE + KK+RLL RA+ +A GK V K+P V++ G+
Sbjct: 81 NQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGV 140
Query: 134 NHVTYLIEQ 142
N VT L+E
Sbjct: 141 NTVTTLVEN 149
>sp|Q4R5C2|RL7A_MACFA 60S ribosomal protein L7a OS=Macaca fascicularis GN=RPL7A PE=2 SV=1
Length = 266
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 98/129 (75%), Gaps = 1/129 (0%)
Query: 15 KKKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAIRIQRQRRILRQRLKVPPAL 74
K++ +KVVNPLFEKRPK FGIG + PK+DL R+VKWP+ IR+QRQR IL +RLKVPPA+
Sbjct: 21 KQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAI 80
Query: 75 NQFTKTLDKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGK-TVEAKKPIVVKYGL 133
NQFT+ LD+ A+ L KL KYRPE + KK+RLL RA+ +A GK V K+P V++ G+
Sbjct: 81 NQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGV 140
Query: 134 NHVTYLIEQ 142
N VT L+E
Sbjct: 141 NTVTTLVEN 149
>sp|P62424|RL7A_HUMAN 60S ribosomal protein L7a OS=Homo sapiens GN=RPL7A PE=1 SV=2
Length = 266
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 98/129 (75%), Gaps = 1/129 (0%)
Query: 15 KKKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAIRIQRQRRILRQRLKVPPAL 74
K++ +KVVNPLFEKRPK FGIG + PK+DL R+VKWP+ IR+QRQR IL +RLKVPPA+
Sbjct: 21 KQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAI 80
Query: 75 NQFTKTLDKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGK-TVEAKKPIVVKYGL 133
NQFT+ LD+ A+ L KL KYRPE + KK+RLL RA+ +A GK V K+P V++ G+
Sbjct: 81 NQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGV 140
Query: 134 NHVTYLIEQ 142
N VT L+E
Sbjct: 141 NTVTTLVEN 149
>sp|P17076|RL8A_YEAST 60S ribosomal protein L8-A OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL8A PE=1 SV=4
Length = 256
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/147 (56%), Positives = 97/147 (65%), Gaps = 7/147 (4%)
Query: 1 MAPKRGGKVAAAP---AKKKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAIRI 57
MAP G KVA AP K K NPL PK FGIG A+ PK++L RYVKWP+ +R+
Sbjct: 1 MAP--GKKVAPAPFGAKSTKSNKTRNPLTHSTPKNFGIGQAVQPKRNLSRYVKWPEYVRV 58
Query: 58 QRQRRILRQRLKVPPALNQFTKTLDKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAE 117
QRQ++IL RLKVPP + QF TLD+N A+ FKL KYRPE A KKERL K A A AE
Sbjct: 59 QRQKKILSIRLKVPPTIAQFQYTLDRNTAAETFKLFNKYRPETAAEKKERLTKEAAAVAE 118
Query: 118 GKTVE--AKKPIVVKYGLNHVTYLIEQ 142
GK+ + + KP VKYGLNHV LIE
Sbjct: 119 GKSKQDASPKPYAVKYGLNHVVALIEN 145
>sp|O57592|RL7A_TAKRU 60S ribosomal protein L7a OS=Takifugu rubripes GN=rpl7a PE=3 SV=3
Length = 266
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 97/129 (75%), Gaps = 1/129 (0%)
Query: 15 KKKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAIRIQRQRRILRQRLKVPPAL 74
K + +KVVNPLFEKRPK FGIG + PK+DL R+VKWP+ IR+QRQR IL +RLKVPPA+
Sbjct: 21 KHEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRSILYKRLKVPPAI 80
Query: 75 NQFTKTLDKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGK-TVEAKKPIVVKYGL 133
NQFT+ LD+ A+ LFKL KYRPE + KK+RLL RA+ +A GK K+P V++ G+
Sbjct: 81 NQFTQALDRQTATQLFKLAHKYRPETKQEKKKRLLARAEQKAAGKGDAPTKRPPVLRAGV 140
Query: 134 NHVTYLIEQ 142
N +T L+E
Sbjct: 141 NTITSLVEN 149
>sp|P29453|RL8B_YEAST 60S ribosomal protein L8-B OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL8B PE=1 SV=3
Length = 256
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/147 (56%), Positives = 97/147 (65%), Gaps = 7/147 (4%)
Query: 1 MAPKRGGKVAAAP---AKKKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAIRI 57
MAP G KVA AP K K NPL PK FGIG A+ PK++L RYVKWP+ +R+
Sbjct: 1 MAP--GKKVAPAPFGAKSTKSNKAKNPLTHSTPKNFGIGQAVQPKRNLSRYVKWPEYVRL 58
Query: 58 QRQRRILRQRLKVPPALNQFTKTLDKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAE 117
QRQ++IL RLKVPP + QF TLD+N A+ FKL KYRPE A KKERL K A A AE
Sbjct: 59 QRQKKILSIRLKVPPTIAQFQYTLDRNTAAETFKLFNKYRPETAAEKKERLTKEAAAIAE 118
Query: 118 GKTVE--AKKPIVVKYGLNHVTYLIEQ 142
GK+ + + KP VKYGLNHV LIE
Sbjct: 119 GKSKQDASPKPYAVKYGLNHVVSLIEN 145
>sp|P32429|RL7A_CHICK 60S ribosomal protein L7a OS=Gallus gallus GN=RPL7A PE=2 SV=2
Length = 266
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/129 (57%), Positives = 97/129 (75%), Gaps = 1/129 (0%)
Query: 15 KKKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAIRIQRQRRILRQRLKVPPAL 74
K++ +KVVNPLFEKRPK FGIG + PK+DL R+VKWP+ IR+QRQR IL +RLKVPPA+
Sbjct: 21 KQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRSILYKRLKVPPAI 80
Query: 75 NQFTKTLDKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGK-TVEAKKPIVVKYGL 133
NQF++ LD+ A+ L KL KYRPE + KK+RLL RA+ +A GK K+P V++ G+
Sbjct: 81 NQFSQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEQKAAGKGDTPTKRPPVLRAGV 140
Query: 134 NHVTYLIEQ 142
N VT L+E
Sbjct: 141 NTVTTLVEN 149
>sp|Q90YW2|RL7A_ICTPU 60S ribosomal protein L7a OS=Ictalurus punctatus GN=rpl7a PE=2 SV=3
Length = 266
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/129 (57%), Positives = 94/129 (72%), Gaps = 1/129 (0%)
Query: 15 KKKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAIRIQRQRRILRQRLKVPPAL 74
K + +KVVNPLFEKRPK FGIG + PK+DL R+VKWP+ +R+QR IL +RLKVPPA+
Sbjct: 21 KHEVKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYVRLQRHGSILYKRLKVPPAI 80
Query: 75 NQFTKTLDKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGK-TVEAKKPIVVKYGL 133
NQF + LD+ A+ LFKL KYRPE + KK RLL RA+ +A GK V K+P VV+ G+
Sbjct: 81 NQFNQALDRQTATQLFKLAHKYRPETKQEKKRRLLARAEQKAAGKGDVPTKRPPVVRAGV 140
Query: 134 NHVTYLIEQ 142
N VT L+E
Sbjct: 141 NTVTSLVES 149
>sp|P46223|RL7A_DROME 60S ribosomal protein L7a OS=Drosophila melanogaster GN=RpL7A PE=2
SV=2
Length = 271
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/121 (61%), Positives = 91/121 (75%), Gaps = 1/121 (0%)
Query: 23 NPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAIRIQRQRRILRQRLKVPPALNQFTKTLD 82
N LFEKRPK FGIG + PK+DL R+V+WPK IR+QRQ+ +L++RLKVPP ++QF++TLD
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 83 KNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGKTVE-AKKPIVVKYGLNHVTYLIE 141
K A LFKLL KYRPE AKK RL K A+A+A+GK VE KKP V G N VT LIE
Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 142 Q 142
Q
Sbjct: 154 Q 154
>sp|Q54ZD1|RL7A_DICDI 60S ribosomal protein L7a OS=Dictyostelium discoideum GN=rpl7a PE=1
SV=1
Length = 285
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 89/127 (70%), Gaps = 5/127 (3%)
Query: 21 VVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAIRIQRQRRILRQRLKVPPALNQFTKT 80
+ N L+ K K FG G + PK+DL + WP+ I++QRQRR+L +RLKVPP +NQFT+
Sbjct: 42 LFNALYTKNVKNFGTGFGVQPKRDLTHFTHWPRYIKLQRQRRVLLKRLKVPPTINQFTRV 101
Query: 81 LDKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEA---EGKTV-EAKKPIV-VKYGLNH 135
DKN A LFKLL KYRPE+ + KK RLLK A+A A +G+ +A+KP+ +++G++
Sbjct: 102 FDKNTAVHLFKLLDKYRPEEASVKKARLLKIAEARAATPKGQAAPKAEKPVQHLRFGIDS 161
Query: 136 VTYLIEQ 142
VT LIE+
Sbjct: 162 VTKLIEK 168
>sp|Q966C6|RL7A_CAEEL 60S ribosomal protein L7a OS=Caenorhabditis elegans GN=rpl-7A PE=1
SV=3
Length = 265
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 85/123 (69%), Gaps = 1/123 (0%)
Query: 20 KVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAIRIQRQRRILRQRLKVPPALNQFTK 79
+V NPLFEKR + F IG + PKKD+ R+VKWPK IR+QRQ IL++RLKVPP +NQF
Sbjct: 27 EVKNPLFEKRARNFNIGQDIQPKKDVTRFVKWPKYIRLQRQSAILQKRLKVPPTINQFRT 86
Query: 80 TLDKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGKTVE-AKKPIVVKYGLNHVTY 138
LD A FKLL KYRPE AKK RL RA+A A GK E K+P V++G+N +T
Sbjct: 87 ALDSQSARQAFKLLDKYRPESTEAKKNRLRARAEARAAGKKEEVTKRPNTVRHGVNTITR 146
Query: 139 LIE 141
L+E
Sbjct: 147 LVE 149
>sp|O76732|RL7A_ANOGA 60S ribosomal protein L7a OS=Anopheles gambiae GN=RpL7A PE=3 SV=2
Length = 271
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 88/121 (72%), Gaps = 1/121 (0%)
Query: 23 NPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAIRIQRQRRILRQRLKVPPALNQFTKTLD 82
NPLFEKR K +GIG + PK+DL R+VKWPK IRIQR R IL++RLK+PP +NQFT+TLD
Sbjct: 35 NPLFEKRVKNYGIGQNVQPKRDLSRFVKWPKYIRIQRHRAILQKRLKIPPPINQFTQTLD 94
Query: 83 KNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGKTV-EAKKPIVVKYGLNHVTYLIE 141
K A + K+L KYRPE+ A+ +RL +A+A+A GK +K+ ++ G+N V ++E
Sbjct: 95 KPTAQQVMKMLEKYRPENPIARVQRLKAKAEAKAAGKEEPPSKRANQLRQGINSVVKMVE 154
Query: 142 Q 142
Q
Sbjct: 155 Q 155
>sp|Q8SSG1|RL7A_ENCCU 60S ribosomal protein L7a OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPL7A PE=1 SV=1
Length = 193
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 50 KWPKAIRIQRQRRILRQRLKVPPALNQFTKTLDKNLASSLFKLLLKYRPEDRAAKKERLL 109
K + + I+++ L +++PPA+ QF L ++ +L +KYRPE++ K+ RL
Sbjct: 8 KIERDLLIKKKVSKLANSIRIPPAIYQFRTVLSEHDTKKFVELFMKYRPENKQEKRIRL- 66
Query: 110 KRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIE 141
Q+E K KPI+VK+GL HVT LIE
Sbjct: 67 ---QSEDPKK---GPKPILVKFGLKHVTNLIE 92
>sp|Q29375|RL7A_PIG 60S ribosomal protein L7a (Fragment) OS=Sus scrofa GN=RPL7A PE=2
SV=1
Length = 132
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 86 ASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGK-TVEAKKPIVVKYGLNHVTYLIEQ 142
A+ L K+ KYRPE + KK+RLL RA+ +A K V K+P V++ G+N VT L+E
Sbjct: 3 ATQLLKVAHKYRPETKQEKKQRLLARAEKKAAXKGDVPTKRPPVLRAGVNTVTTLVEN 60
>sp|P10676|NINAC_DROME Neither inactivation nor afterpotential protein C OS=Drosophila
melanogaster GN=ninaC PE=1 SV=2
Length = 1501
Score = 33.1 bits (74), Expect = 0.61, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 19/82 (23%)
Query: 28 KRPKQFGIGGALPPKKDLHRYVKWPKAIRIQRQRRILRQRLKVPPALNQFTKTLDKNLA- 86
K K F +G P D+ A +IQ+ R R R+++PP +N+ + L++N A
Sbjct: 1057 KGGKVFKLGKKGPEHHDV-------AASKIQKAFRGFRDRVRLPPLVNEKSGQLNENTAD 1109
Query: 87 -----------SSLFKLLLKYR 97
S+F++LL YR
Sbjct: 1110 FIRPFAKKWREKSIFQVLLHYR 1131
>sp|Q9QWE9|GGT5_RAT Gamma-glutamyltransferase 5 OS=Rattus norvegicus GN=Ggt5 PE=2 SV=1
Length = 572
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 34 GIGGALPPKKDLHR-YVKWPKAIRIQRQRRILRQRLKVPPALNQFTKT--LDKNLASSLF 90
G+ G L + HR Y + P A Q +LR+ +VPP L+QF T L L SS
Sbjct: 139 GVPGELRGYAEAHRRYGRLPWAQLFQPTIALLREGFRVPPILSQFLNTSFLQPCLNSSTL 198
Query: 91 KLLL 94
+ L
Sbjct: 199 RHLF 202
>sp|Q9KF75|CYSI_BACHD Sulfite reductase [NADPH] hemoprotein beta-component OS=Bacillus
halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344
/ JCM 9153 / C-125) GN=cysI PE=3 SV=1
Length = 572
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 8 KVAAAPAKKKPEKVVNPLFEKRPKQFGIGGALPPKKDL 45
KVA P ++ E + PL+ P++F IG A+PP D+
Sbjct: 194 KVAGTPEAEEVEPMYGPLY--LPRKFKIGIAVPPSNDI 229
>sp|Q65L57|CYSI_BACLD Sulfite reductase [NADPH] hemoprotein beta-component OS=Bacillus
licheniformis (strain DSM 13 / ATCC 14580) GN=cysI PE=3
SV=1
Length = 572
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 8 KVAAAPAKKKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRY 48
KVA P + E + PL+ P++F IG A+PP D+ +
Sbjct: 194 KVAGTPDADEVEPMYGPLY--LPRKFKIGIAVPPSNDIDVF 232
>sp|Q5WKE7|CYSI_BACSK Sulfite reductase [NADPH] hemoprotein beta-component OS=Bacillus
clausii (strain KSM-K16) GN=cysI PE=3 SV=1
Length = 573
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 8 KVAAAPAKKKPEKVVNPLFEKRPKQFGIGGALPPKKDL 45
KVA P + + E + PL+ P++F IG A+PP D+
Sbjct: 195 KVAGTPQQDEVEPMYGPLY--LPRKFKIGVAVPPANDV 230
>sp|Q9UBF1|MAGC2_HUMAN Melanoma-associated antigen C2 OS=Homo sapiens GN=MAGEC2 PE=1 SV=1
Length = 373
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 70 VPPALNQFTKTLDKNLASSLFKLLLKYRPEDRAAKKERLL 109
+P + + FT TLD+ +A + LLLKY E+ + E L+
Sbjct: 130 LPDSESSFTYTLDEKVAELVEFLLLKYEAEEPVTEAEMLM 169
>sp|Q8VDJ3|VIGLN_MOUSE Vigilin OS=Mus musculus GN=Hdlbp PE=1 SV=1
Length = 1268
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Query: 5 RGGKVAAAPAKKKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAIRIQRQRRIL 64
+G K AKK+ ++++ L Q + A+P K HR V PK RIQ+ R
Sbjct: 850 KGAKDCVEAAKKRIQEIIEDL----EAQVTVECAIPQK--FHRSVMGPKGSRIQQITRDY 903
Query: 65 RQRLKVP 71
++K P
Sbjct: 904 NVQIKFP 910
>sp|Q00341|VIGLN_HUMAN Vigilin OS=Homo sapiens GN=HDLBP PE=1 SV=2
Length = 1268
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Query: 5 RGGKVAAAPAKKKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAIRIQRQRRIL 64
+G K AKK+ ++++ L Q + A+P K HR V PK RIQ+ R
Sbjct: 850 KGAKDCVEAAKKRIQEIIEDL----EAQVTLECAIPQK--FHRSVMGPKGSRIQQITRDF 903
Query: 65 RQRLKVP 71
++K P
Sbjct: 904 SVQIKFP 910
>sp|Q63517|CENPI_RAT Centromere protein I OS=Rattus norvegicus GN=Cenpi PE=2 SV=1
Length = 745
Score = 29.6 bits (65), Expect = 6.7, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 24/120 (20%)
Query: 19 EKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPK--AIRIQRQRRILRQRL-----KV- 70
E V P+ + P + +GG++ L Y+ W AIR++ +L + KV
Sbjct: 505 EAQVQPMTDS-PLETTLGGSMDSVSQLIEYIGWLSMVAIRLESSSTLLVHFILDFYEKVC 563
Query: 71 ---------------PPALNQFTKTLDKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAE 115
P + +LD + + L ++ +YR AAKK+ L+++A++E
Sbjct: 564 DIYINYDLPLVVLFPPVVFHSAFLSLDATILNQLCYIMYRYRDNLTAAKKKDLVQKAKSE 623
>sp|Q5R439|VIGLN_PONAB Vigilin OS=Pongo abelii GN=HDLBP PE=2 SV=1
Length = 1268
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Query: 5 RGGKVAAAPAKKKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAIRIQRQRRIL 64
+G K AKK+ ++++ L Q + A+P K HR V PK RIQ+ R
Sbjct: 850 KGAKGCVEAAKKRIQEIIEDL----EAQVTLECAIPQK--FHRSVMGPKGSRIQQITRDF 903
Query: 65 RQRLKVP 71
++K P
Sbjct: 904 SVQIKFP 910
>sp|Q63164|DYH1_RAT Dynein heavy chain 1, axonemal OS=Rattus norvegicus GN=Dnah1 PE=2
SV=2
Length = 4516
Score = 29.6 bits (65), Expect = 7.1, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 51/118 (43%), Gaps = 7/118 (5%)
Query: 27 EKRPKQFGIGGALPPKKDLHRYVKWPKAIRIQRQRRILRQRLKVPPALNQFTKTLDKNLA 86
E R + GI +PP DL+ Y+ + K++ + I + T +N
Sbjct: 4161 EHRYSKSGIYHQIPPTYDLNGYLSYIKSLPLNDMPEIFGLH-------DNANITFAQNET 4213
Query: 87 SSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQML 144
+LF +L+ +P+ + + + + AE V+ KP+ ++ +N L E+ +
Sbjct: 4214 FALFGAILQLQPKSSSMGGQSREELVEDVAEDILVQVPKPVDLEEVVNKYPVLYEESM 4271
>sp|Q8K9P5|RLMN_BUCAP Dual-specificity RNA methyltransferase RlmN OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=rlmN PE=3 SV=1
Length = 363
Score = 29.3 bits (64), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 11/74 (14%)
Query: 60 QRRILRQRLKVPPALNQFTKTLDKNLA-----------SSLFKLLLKYRPEDRAAKKERL 108
+RRI + PALN+ K +D +LA +S+ + +KY + +
Sbjct: 200 KRRITLSTSGIVPALNKLIKKIDVSLAISLHAPNDFIRNSIMPINMKYNIKSFLNSVSKY 259
Query: 109 LKRAQAEAEGKTVE 122
LK + A G TVE
Sbjct: 260 LKHSHANRGGVTVE 273
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,605,490
Number of Sequences: 539616
Number of extensions: 2076385
Number of successful extensions: 6474
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 6412
Number of HSP's gapped (non-prelim): 72
length of query: 145
length of database: 191,569,459
effective HSP length: 106
effective length of query: 39
effective length of database: 134,370,163
effective search space: 5240436357
effective search space used: 5240436357
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)