BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032211
(145 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255545196|ref|XP_002513659.1| conserved hypothetical protein [Ricinus communis]
gi|223547567|gb|EEF49062.1| conserved hypothetical protein [Ricinus communis]
Length = 170
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/137 (78%), Positives = 120/137 (87%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MFSPYGKIVSEDFLWHTRGPKRG PRGFAF+++STKEEA+LAKEKMHGRLACGRPLVVRL
Sbjct: 33 MFSPYGKIVSEDFLWHTRGPKRGEPRGFAFVQFSTKEEAELAKEKMHGRLACGRPLVVRL 92
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
ASEKYLE+AAQNS +AVGE KT GGTSGQM+R+AKIAAIKNKL+ LEEE SS KKQK
Sbjct: 93 ASEKYLEEAAQNSCRAVGEMKKTSTAGGTSGQMSRNAKIAAIKNKLRTLEEEGSSVKKQK 152
Query: 121 QADNSSCNGSLNCLSGK 137
Q+ + N L+ LSG+
Sbjct: 153 QSGSILGNSRLDRLSGE 169
>gi|224077392|ref|XP_002305243.1| predicted protein [Populus trichocarpa]
gi|222848207|gb|EEE85754.1| predicted protein [Populus trichocarpa]
Length = 138
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 102/132 (77%), Positives = 116/132 (87%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF+PYGKI+SE+FLWHTRGPKRG PRGFAFI++STKEEAKLAKEKMHGRLACGRPLVVRL
Sbjct: 1 MFTPYGKILSEEFLWHTRGPKRGEPRGFAFIQFSTKEEAKLAKEKMHGRLACGRPLVVRL 60
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
ASEKY+++AAQ+SS A+GEA K G G T GQ +RSAKIAAIKNKL+ALEE S KKQK
Sbjct: 61 ASEKYVDEAAQDSSTALGEAKKAGLTGSTLGQTSRSAKIAAIKNKLRALEEGGPSVKKQK 120
Query: 121 QADNSSCNGSLN 132
QAD+ SC SL+
Sbjct: 121 QADSDSCKDSLD 132
>gi|356561522|ref|XP_003549030.1| PREDICTED: probable RNA-binding protein 18-like [Glycine max]
Length = 212
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/128 (74%), Positives = 108/128 (84%), Gaps = 2/128 (1%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MFSPYGKI+SEDFLWHTRGPKRG PRGFAFI+YSTKEEA+LAKEKMHGRLACGRPL VRL
Sbjct: 85 MFSPYGKIISEDFLWHTRGPKRGEPRGFAFIQYSTKEEAELAKEKMHGRLACGRPLFVRL 144
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFV--GGTSGQMNRSAKIAAIKNKLKALEEESSSAKK 118
A EK++ + A NS+KA GE +K GG GQ +R AKIAAIKNKLK+LEEESS +KK
Sbjct: 145 AGEKFMLETADNSTKAAGEGHKMHLTGGGGAMGQTSRHAKIAAIKNKLKSLEEESSRSKK 204
Query: 119 QKQADNSS 126
QK++DN S
Sbjct: 205 QKRSDNIS 212
>gi|356529159|ref|XP_003533164.1| PREDICTED: probable RNA-binding protein 18-like [Glycine max]
Length = 157
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 94/128 (73%), Positives = 106/128 (82%), Gaps = 2/128 (1%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MFSPYGKI+SEDFLWHTRGPKRG PRGFAFI+YSTKEEA+LAKEKMHGRLAC RPLVVRL
Sbjct: 30 MFSPYGKIISEDFLWHTRGPKRGEPRGFAFIQYSTKEEAELAKEKMHGRLACSRPLVVRL 89
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFV--GGTSGQMNRSAKIAAIKNKLKALEEESSSAKK 118
A +K + + +S+KA GE +K GG GQ +RSAKIAAIKNKLK+LEEESS KK
Sbjct: 90 AGDKCMLETVDSSTKAAGEGHKMHLTGGGGAMGQTSRSAKIAAIKNKLKSLEEESSRTKK 149
Query: 119 QKQADNSS 126
QKQ+DN S
Sbjct: 150 QKQSDNIS 157
>gi|357438285|ref|XP_003589418.1| Polyadenylate-binding protein [Medicago truncatula]
gi|357473041|ref|XP_003606805.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355478466|gb|AES59669.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355507860|gb|AES89002.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 157
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/126 (73%), Positives = 105/126 (83%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MFSPYGKI+SEDFLWHTRGPKRG PRGFAFI+YSTKEEA LAKEKMHGRLAC RPLVVRL
Sbjct: 32 MFSPYGKIMSEDFLWHTRGPKRGEPRGFAFIQYSTKEEAILAKEKMHGRLACSRPLVVRL 91
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A E+Y + A +S+KAV E +K GG GQ +RSAKIAAIKNKLK+LEE++S KKQK
Sbjct: 92 AGERYALEKADSSTKAVSEGHKLHLTGGGIGQTSRSAKIAAIKNKLKSLEEDNSKTKKQK 151
Query: 121 QADNSS 126
+DN S
Sbjct: 152 LSDNVS 157
>gi|388504432|gb|AFK40282.1| unknown [Medicago truncatula]
Length = 157
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 92/126 (73%), Positives = 105/126 (83%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MFSPYGKI+SEDFLWHTRGPKRG PRGFAFI+YSTKEEA LAKEKMHGRLAC RPLV+RL
Sbjct: 32 MFSPYGKIMSEDFLWHTRGPKRGEPRGFAFIQYSTKEEAILAKEKMHGRLACSRPLVIRL 91
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A E+Y + A +S+KAV E +K GG GQ +RSAKIAAIKNKLK+LEE++S KKQK
Sbjct: 92 AGERYALEKADSSTKAVSEGHKLHLTGGGIGQTSRSAKIAAIKNKLKSLEEDNSKTKKQK 151
Query: 121 QADNSS 126
+DN S
Sbjct: 152 LSDNVS 157
>gi|302143805|emb|CBI22666.3| unnamed protein product [Vitis vinifera]
Length = 188
Score = 191 bits (486), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 89/132 (67%), Positives = 109/132 (82%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MFSP+GKIV EDF+WHTRGPKRG PRGFAF+E+STKEEA+LAKEKMHG+L CGRPL VRL
Sbjct: 50 MFSPFGKIVGEDFMWHTRGPKRGEPRGFAFVEFSTKEEAELAKEKMHGKLICGRPLTVRL 109
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+EK L + A+ + + VG +NK+ G +SGQM+RSAKIAAIKNKLK +EEES+ K+QK
Sbjct: 110 ANEKSLMETAEAAPQRVGTSNKSSLTGRSSGQMSRSAKIAAIKNKLKEMEEESNGTKRQK 169
Query: 121 QADNSSCNGSLN 132
AD SC+ L+
Sbjct: 170 VADKVSCSNGLD 181
>gi|359490617|ref|XP_002272950.2| PREDICTED: probable RNA-binding protein 18-like [Vitis vinifera]
Length = 218
Score = 191 bits (485), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 89/132 (67%), Positives = 109/132 (82%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MFSP+GKIV EDF+WHTRGPKRG PRGFAF+E+STKEEA+LAKEKMHG+L CGRPL VRL
Sbjct: 80 MFSPFGKIVGEDFMWHTRGPKRGEPRGFAFVEFSTKEEAELAKEKMHGKLICGRPLTVRL 139
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+EK L + A+ + + VG +NK+ G +SGQM+RSAKIAAIKNKLK +EEES+ K+QK
Sbjct: 140 ANEKSLMETAEAAPQRVGTSNKSSLTGRSSGQMSRSAKIAAIKNKLKEMEEESNGTKRQK 199
Query: 121 QADNSSCNGSLN 132
AD SC+ L+
Sbjct: 200 VADKVSCSNGLD 211
>gi|358344347|ref|XP_003636251.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355502186|gb|AES83389.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 157
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/126 (72%), Positives = 102/126 (80%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MFSPYGKIVS D LWHTRGPKRG PRGFAFI YSTKEEA LA+EKMHGRLAC RPLVVRL
Sbjct: 32 MFSPYGKIVSVDLLWHTRGPKRGEPRGFAFIHYSTKEEAILAREKMHGRLACSRPLVVRL 91
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A E+Y + A +S+KAV E +K GG GQ +RSAKIAAIKNKLK+LEE++S KKQK
Sbjct: 92 AGERYALEKADSSTKAVSEGHKLHLTGGGIGQTSRSAKIAAIKNKLKSLEEDNSKTKKQK 151
Query: 121 QADNSS 126
+DN S
Sbjct: 152 LSDNIS 157
>gi|147815698|emb|CAN68282.1| hypothetical protein VITISV_021345 [Vitis vinifera]
Length = 216
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 89/136 (65%), Positives = 109/136 (80%), Gaps = 4/136 (2%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKE----EAKLAKEKMHGRLACGRPL 56
MFSP+GKIV EDF+WHTRGPKRG PRGFAF+E+STKE EA+LAKEKMHG+L CGRPL
Sbjct: 74 MFSPFGKIVGEDFMWHTRGPKRGEPRGFAFVEFSTKEASYIEAELAKEKMHGKLICGRPL 133
Query: 57 VVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSA 116
VRLA+EK L + A+ + + VG +NK+ G +SGQM+RSAKIAAIKNKLK +EEES+
Sbjct: 134 TVRLANEKSLMETAEAAPQRVGTSNKSSLTGRSSGQMSRSAKIAAIKNKLKEMEEESNGT 193
Query: 117 KKQKQADNSSCNGSLN 132
K+QK AD SC+ L+
Sbjct: 194 KRQKVADKVSCSNGLD 209
>gi|449456323|ref|XP_004145899.1| PREDICTED: probable RNA-binding protein 18-like [Cucumis sativus]
gi|449497265|ref|XP_004160356.1| PREDICTED: probable RNA-binding protein 18-like [Cucumis sativus]
Length = 171
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 89/128 (69%), Positives = 104/128 (81%), Gaps = 3/128 (2%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FSP+GKI+SEDFLWHTRGPKRG PRGFAFIEYS+KEEAKLAKEKMHG+LACGRPLVVRL
Sbjct: 32 LFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKEKMHGKLACGRPLVVRL 91
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALE--EESSSAKK 118
ASEK + + ++S+ E+ K+ G + GQ+ RS KIAAIKNKL+ALE ESSS KK
Sbjct: 92 ASEKLMTNTTNDTSRTASESRKSRLGGSSYGQLTRSDKIAAIKNKLRALEGGGESSSVKK 151
Query: 119 QKQADNSS 126
KQ DN S
Sbjct: 152 PKQ-DNIS 158
>gi|356519834|ref|XP_003528574.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein
18-like [Glycine max]
Length = 190
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/131 (66%), Positives = 101/131 (77%), Gaps = 5/131 (3%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFI---EYSTK-EEAKLAKEKMHGRLACGRPL 56
MFSPYGKI+SEDFLWHTRGPKRG GFAFI EY + +EA+LAKEKMHGRLACGRPL
Sbjct: 60 MFSPYGKIISEDFLWHTRGPKRGESHGFAFIQLIEYIMRMQEAELAKEKMHGRLACGRPL 119
Query: 57 VVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTS-GQMNRSAKIAAIKNKLKALEEESSS 115
VVRLA +K + + S+KA GE +K GG + GQ +RSAKI A KNKLK+LEEESS
Sbjct: 120 VVRLAGDKCMLETTDRSTKAAGEGHKMHLTGGGAMGQTSRSAKIVATKNKLKSLEEESSR 179
Query: 116 AKKQKQADNSS 126
KKQKQ+D +S
Sbjct: 180 TKKQKQSDYTS 190
>gi|218184933|gb|EEC67360.1| hypothetical protein OsI_34460 [Oryza sativa Indica Group]
Length = 167
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/120 (62%), Positives = 96/120 (80%), Gaps = 1/120 (0%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MFSP+GKI++EDFLWHTRGPKRG PRG+AF++Y+TKEEA+LAKEKM+GRL CGRP+VV L
Sbjct: 32 MFSPFGKIIAEDFLWHTRGPKRGEPRGYAFVQYTTKEEAQLAKEKMNGRLVCGRPVVVHL 91
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
ASEK D+ NS +A+ + G G S Q +R+AKIAAIK+KLK+LE+E S K+ +
Sbjct: 92 ASEKCFVDSG-NSHRAMKDKKLAGGSGSKSVQTDRAAKIAAIKHKLKSLEDEGCSTKRPR 150
>gi|222613180|gb|EEE51312.1| hypothetical protein OsJ_32272 [Oryza sativa Japonica Group]
Length = 167
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/120 (62%), Positives = 96/120 (80%), Gaps = 1/120 (0%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MFSP+GKI++EDFLWHTRGPKRG PRG+AF++Y+TKEEA+LAKEKM+GRL CGRP+VV L
Sbjct: 32 MFSPFGKIIAEDFLWHTRGPKRGEPRGYAFVQYTTKEEAQLAKEKMNGRLVCGRPVVVHL 91
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
ASEK D+ NS +A+ + G G S Q +R+AKIAAIK+KLK+LE+E S K+ +
Sbjct: 92 ASEKCFVDSG-NSHRAMKDKKLAGGSGSKSVQTDRAAKIAAIKHKLKSLEDEGCSTKRPR 150
>gi|326515262|dbj|BAK03544.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520728|dbj|BAJ92727.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 169
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/120 (61%), Positives = 95/120 (79%), Gaps = 1/120 (0%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MFSPYGKI++EDFL HTRGPKRG PRG+AF++Y+TKEEA+LAKEKM+G+L CGRP+VV L
Sbjct: 34 MFSPYGKIIAEDFLLHTRGPKRGEPRGYAFVQYTTKEEAQLAKEKMNGKLVCGRPVVVHL 93
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
ASEK D+ NS +A+ + G G S Q +R+AKI+AIKNKL++LE E SAK+ +
Sbjct: 94 ASEKGSLDSG-NSQRALKDKKLAGGSGSKSAQTDRAAKISAIKNKLRSLENEGCSAKRPR 152
>gi|226531406|ref|NP_001151901.1| ATP binding protein [Zea mays]
gi|195650797|gb|ACG44866.1| ATP binding protein [Zea mays]
gi|223948927|gb|ACN28547.1| unknown [Zea mays]
gi|414867508|tpg|DAA46065.1| TPA: ATP binding protein [Zea mays]
Length = 167
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/120 (59%), Positives = 91/120 (75%), Gaps = 1/120 (0%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MFSP+GKI +EDFLWHTRGPKRG PRG+AF++Y+TKEEA+LAKEKM+G+L CGRP+VV L
Sbjct: 32 MFSPFGKITAEDFLWHTRGPKRGEPRGYAFVQYTTKEEAQLAKEKMNGKLICGRPMVVHL 91
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
ASE+ + +S +AV + G G S + +AKIAAIKNKLK+LE+ S KK +
Sbjct: 92 ASER-SSLGSSSSHRAVKDKKLAGGSGAKSQYTDTAAKIAAIKNKLKSLEDGGCSTKKPR 150
>gi|116780582|gb|ABK21729.1| unknown [Picea sitchensis]
Length = 188
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 75/114 (65%), Gaps = 15/114 (13%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MFSP+GKI E+F+WH GP++G PRGFAFIE+S +EEA+ AKE M+GR A GRPLVVR
Sbjct: 44 MFSPFGKICFEEFMWHRHGPRKGEPRGFAFIEFSKREEAEKAKESMNGRFALGRPLVVRF 103
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESS 114
E ++ +S +++S+KIAAI+NKLK++E+ +S
Sbjct: 104 VDEN---------------SDNPNISCMSSCTVSKSSKIAAIQNKLKSMEQTTS 142
>gi|297796067|ref|XP_002865918.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311753|gb|EFH42177.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 132
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 71/88 (80%), Gaps = 3/88 (3%)
Query: 37 EEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSK-AVGEANKTGFV-GGTSGQMN 94
+EA+LAKEKMHGRLACGRPLVVRLASEK LED + + SK ++ EAN+ FV G +SGQM+
Sbjct: 45 QEAELAKEKMHGRLACGRPLVVRLASEKQLEDISHDHSKRSLPEANRPRFVNGSSSGQMS 104
Query: 95 RSAKIAAIKNKLKALEE-ESSSAKKQKQ 121
R K+AAIKNKLKALEE E KKQK+
Sbjct: 105 RDEKVAAIKNKLKALEEDEKRDPKKQKR 132
>gi|307135920|gb|ADN33783.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 105
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 71/92 (77%), Gaps = 3/92 (3%)
Query: 37 EEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRS 96
+EAKLAKEKMHG+LACGRPLVVRLASEK + + A ++SKA E+ K+ G + GQ+ RS
Sbjct: 2 QEAKLAKEKMHGKLACGRPLVVRLASEKLMVNTANDTSKAASESRKSRLGGSSYGQLTRS 61
Query: 97 AKIAAIKNKLKALE--EESSSAKKQKQADNSS 126
KIAAIKNKL+ALE ESSS KK KQ DN S
Sbjct: 62 DKIAAIKNKLRALEGGGESSSVKKPKQ-DNIS 92
>gi|255637519|gb|ACU19086.1| unknown [Glycine max]
Length = 92
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 37 EEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTS-GQMNR 95
+EA+LAKEKMHGRLAC RPLVV LA +K + + + +KA GE +K GG + GQ +R
Sbjct: 2 QEAELAKEKMHGRLACSRPLVVCLAGDKCMLETVDSFTKAAGEGHKMHLTGGGAMGQTSR 61
Query: 96 SAKIAAIKNKLKALEEESSSAKKQKQADNSS 126
SAKIAAIKNKLK+LEEES KKQKQ+DN S
Sbjct: 62 SAKIAAIKNKLKSLEEESFRTKKQKQSDNIS 92
>gi|240256440|ref|NP_680425.4| uncharacterized protein [Arabidopsis thaliana]
gi|332008846|gb|AED96229.1| uncharacterized protein [Arabidopsis thaliana]
Length = 79
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 62/78 (79%), Gaps = 3/78 (3%)
Query: 46 MHGRLACGRPLVVRLASEKYLEDAAQNSSK-AVGEANKTGFV-GGTSGQMNRSAKIAAIK 103
MHGRLACGRPLVVRLASEK+LED++ + SK ++ E N+T FV G +SGQM+R K+ AIK
Sbjct: 1 MHGRLACGRPLVVRLASEKHLEDSSHDHSKRSLPEGNRTRFVNGSSSGQMSRDEKVTAIK 60
Query: 104 NKLKALEE-ESSSAKKQK 120
NKLKALEE E KKQK
Sbjct: 61 NKLKALEEDEKRDPKKQK 78
>gi|440797137|gb|ELR18232.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 167
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 73/118 (61%), Gaps = 7/118 (5%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64
YGKIV E F+WH GPKRG P+GF F+E++TK+EA+ AKE+ +GR+ GRPLVVR EK
Sbjct: 27 YGKIVREQFIWHKHGPKRGEPKGFCFVEFATKQEAQTAKERANGRMFLGRPLVVRFVDEK 86
Query: 65 --YLEDAAQNSSKAVGEANKT----GFVGGTSGQMNRSAKIAAIKNKLKALEEESSSA 116
Y D + S AV EA K +++ AKI AI+ KL +++E+ A
Sbjct: 87 VLYSNDRLSDDS-AVVEAEKARKQENERDKEHKRISNEAKIKAIQAKLALMKKETPPA 143
>gi|215687242|dbj|BAG91807.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 101
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
Query: 37 EEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRS 96
+EA+LAKEKM+GRL CGRP+VV LASEK D+ NS +A+ + G G S Q +R+
Sbjct: 2 QEAQLAKEKMNGRLVCGRPVVVHLASEKCFVDSG-NSHRAMKDKKLAGGSGSKSVQTDRA 60
Query: 97 AKIAAIKNKLKALEEESSSAKKQK 120
AKIAAIK+KLK+LE+E S K+ +
Sbjct: 61 AKIAAIKHKLKSLEDEGCSTKRPR 84
>gi|340376678|ref|XP_003386859.1| PREDICTED: probable RNA-binding protein 18-like [Amphimedon
queenslandica]
Length = 227
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 77/121 (63%), Gaps = 6/121 (4%)
Query: 3 SPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA- 61
SPYGKIVS ++ H+ G ++G PRG+ FIEYST+EEA+ AKE M+G++A G+ ++V A
Sbjct: 76 SPYGKIVSFKYMLHSTGAEKGEPRGYCFIEYSTREEAEKAKETMNGKVALGKNIIVDWAR 135
Query: 62 SEKYLEDAAQNSSKAVGEANKTGFVGGT-SGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
++Y+ + + V E V T G + +AKIAA++ KL+ ++++ + Q+
Sbjct: 136 PDQYI----KKTGNTVSETWDASSVSATLRGGASTAAKIAALEAKLQQMDKDQVYSGTQR 191
Query: 121 Q 121
+
Sbjct: 192 K 192
>gi|22002164|gb|AAM88648.1| putative receptor-like protein kinase [Oryza sativa Japonica Group]
Length = 924
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/37 (78%), Positives = 36/37 (97%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKE 37
MFSP+GKI++EDFLWHTRGPKRG PRG+AF++Y+TKE
Sbjct: 888 MFSPFGKIIAEDFLWHTRGPKRGEPRGYAFVQYTTKE 924
>gi|357147187|ref|XP_003574252.1| PREDICTED: probable RNA-binding protein 18-like [Brachypodium
distachyon]
Length = 68
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 36/37 (97%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKE 37
MFSPYGKI++EDFLWHTRGPKRG PRG+AF++++TKE
Sbjct: 32 MFSPYGKIMAEDFLWHTRGPKRGEPRGYAFVQFTTKE 68
>gi|402219696|gb|EJT99769.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 262
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 67/117 (57%), Gaps = 2/117 (1%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F +GKI S DFL+H GP++G PRG+AFIE+S K+EA A MH +L GR LVV A
Sbjct: 64 FERFGKITSLDFLFHKAGPQKGKPRGYAFIEFSNKDEALKAIVTMHDKLVRGRNLVVTFA 123
Query: 62 SE-KYLEDAAQNSSKAVGEANKTGF-VGGTSGQMNRSAKIAAIKNKLKALEEESSSA 116
+ +++A + + A T + ++ + KIA ++ KL L++E ++
Sbjct: 124 HQAPPMDEAGRLGKRKTDTARPTALSLLKNQAKLKTNDKIAVLERKLAQLQKEQPAS 180
>gi|326523345|dbj|BAJ88713.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 70
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 35/37 (94%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKE 37
MFSPYGKI++EDFL HTRGPKRG PRG+AF++Y+TKE
Sbjct: 34 MFSPYGKIIAEDFLLHTRGPKRGEPRGYAFVQYTTKE 70
>gi|357111620|ref|XP_003557610.1| PREDICTED: probable RNA-binding protein 18-like [Brachypodium
distachyon]
Length = 68
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 35/37 (94%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKE 37
MFSPYGKI+SEDFL HTRGPKRG PRG+AF++Y+TKE
Sbjct: 32 MFSPYGKIMSEDFLLHTRGPKRGEPRGYAFVQYTTKE 68
>gi|320168619|gb|EFW45518.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 184
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
M Y FLWH GPKRG PR + F+E++T E A A E+++G+LA GR L V +
Sbjct: 22 MLQRYEGFTKLHFLWHAAGPKRGEPRDYCFVEFATAETANRAVEQLNGKLALGRALRVSI 81
Query: 61 ASEKYLEDAAQNSSKAVGEAN-KTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSA 116
A EK ED N + E + N +A+I A++ KL+ +E ES A
Sbjct: 82 AKEK-AEDDGWNRKRPTEEHGLEVPQTLSLDNIANITARILAVEQKLRLMERESELA 137
>gi|393237431|gb|EJD44973.1| hypothetical protein AURDEDRAFT_38676, partial [Auricularia
delicata TFB-10046 SS5]
Length = 134
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 68/116 (58%), Gaps = 6/116 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS YGKI DFL+H GP++G PRG+AF+E++ KE+A A H +L GR L V
Sbjct: 19 VFSKYGKIARLDFLFHKTGPQKGRPRGYAFVEFTDKEDAAKALVGAHDKLVRGRKLSVTF 78
Query: 61 ASE-KYLEDAAQN--SSKAVGEANKT---GFVGGTSGQMNRSAKIAAIKNKLKALE 110
A++ + D N + + V EA K + T +++ +KIAA++ KL+ ++
Sbjct: 79 ANQAPTMNDLPLNRPARRPVNEAGKPTTLSLLKTTGKKVSTESKIAAMEAKLRQMQ 134
>gi|391341478|ref|XP_003745057.1| PREDICTED: uncharacterized protein LOC100899567 [Metaseiulus
occidentalis]
Length = 357
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 11/139 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +GK+V DFL + GP++G+PRGFAFI Y +E+A+ A ++G GR L V
Sbjct: 45 IFSKHGKVVDFDFLINKTGPQKGLPRGFAFITYENEEQAETAIRSLNGLQLQGRRLSVSF 104
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A E Q KA E V + +N ++I AI+ KL+A+E +S + +
Sbjct: 105 AQE-----MPQPEQKAKKEVTP---VAAVNKDVN--SQIQAIEAKLRAMERKSDADLDEV 154
Query: 121 QADNSSCN-GSLNCLSGKD 138
+ ++SC+ LN +S D
Sbjct: 155 LSASTSCSVKVLNSISCDD 173
>gi|299117380|emb|CBN75336.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 281
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F+P+GK+V E F +H GP+ G PRGF F+EYS ++A A +HGR GRPL VR
Sbjct: 145 LFTPFGKVVREQFCYHKVGPRLGEPRGFCFVEYSNVDDAAKAIRALHGRKLYGRPLRVRF 204
Query: 61 AS 62
+
Sbjct: 205 MT 206
>gi|353240787|emb|CCA72639.1| hypothetical protein PIIN_06576 [Piriformospora indica DSM 11827]
Length = 210
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +GKI DFL+H GP +G PRG+AF+EY+ E A A + +L GR + V
Sbjct: 70 LFSRFGKIAKLDFLFHKAGPMKGKPRGYAFVEYADAESAAKALHACNQKLLRGRKISVTF 129
Query: 61 ASEKYLEDAAQNSSKAVGEANKT--GFVGGTSGQMNRSAKIAAIKNKLKALEEE 112
A++ D + + +GE T + S M +KIAA++ KLK +E+E
Sbjct: 130 ATQA--PDFSTSGRPRIGEVKTTSLSLLKTPSKPMGTESKIAALEAKLKQMEQE 181
>gi|393237451|gb|EJD44993.1| hypothetical protein AURDEDRAFT_87967 [Auricularia delicata
TFB-10046 SS5]
Length = 232
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 6/116 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F+ YGKI DFL+H GP++G PRG+AF+E++ KE+A A H +L GR L V
Sbjct: 58 VFTKYGKIAKLDFLFHKTGPQKGRPRGYAFVEFTDKEDAAKALVGAHDKLVRGRKLSVTF 117
Query: 61 ASE-KYLEDAAQNSS--KAVGEANKT---GFVGGTSGQMNRSAKIAAIKNKLKALE 110
A++ + D N + + V EA K + T +++ +KIAA++ KL+ ++
Sbjct: 118 ANQAPTMNDLPLNRTARRPVSEAGKPTTLSLLKTTGRKVSTESKIAAMEAKLRQMQ 173
>gi|449548452|gb|EMD39419.1| hypothetical protein CERSUDRAFT_113071 [Ceriporiopsis subvermispora
B]
Length = 277
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 8/118 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +GK+ D+L+H GP RG PRG+AFIEY+ +E+A+ A G+L GR LVV A
Sbjct: 62 FSKFGKVSKLDYLFHKTGPLRGKPRGYAFIEYAEQEDAQKALNGADGKLLRGRKLVVTYA 121
Query: 62 SEKYLEDAAQNSS---KAVGEANKTGFVG-----GTSGQMNRSAKIAAIKNKLKALEE 111
+ L++A ++++ + EA K + G+S AKIA ++ KL+ LE
Sbjct: 122 HQAPLDEAGRSNARHRRPTTEAAKPTTLSLMKSVGSSRADAVDAKIARMEAKLRQLEH 179
>gi|299739068|ref|XP_002910157.1| hypothetical protein CC1G_15434 [Coprinopsis cinerea okayama7#130]
gi|298403607|gb|EFI26663.1| hypothetical protein CC1G_15434 [Coprinopsis cinerea okayama7#130]
Length = 499
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 63/126 (50%), Gaps = 17/126 (13%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +GK+ DFL+H GP +G PRG+AF+EY EEA A HG+L GR LVV
Sbjct: 131 VFSKFGKVTKLDFLFHKSGPLKGKPRGYAFVEYGVPEEAAKALSIAHGKLLRGRKLVVTF 190
Query: 61 ASEKYLEDAAQNSS--------KAVGEAN--------KTGFVGGTSGQMNRSAKIAAIKN 104
A + LE S + V E KTG GG + + KIA ++
Sbjct: 191 AHQAPLESYPGGSGGGISSKFRRPVMETGRPTTLSIIKTGL-GGGRHEPKTADKIALMEA 249
Query: 105 KLKALE 110
KL+ LE
Sbjct: 250 KLRQLE 255
>gi|348513822|ref|XP_003444440.1| PREDICTED: probable RNA-binding protein 18-like [Oreochromis
niloticus]
Length = 225
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 6/113 (5%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLAS-- 62
+GK+ DFL+H GP G PRG+ F+ +ST+EEA+ A + ++G+LA + LVVR A
Sbjct: 71 FGKVKQFDFLFHKSGPLEGQPRGYCFVNFSTREEAERAIQCLNGKLALSKKLVVRWAHAQ 130
Query: 63 ----EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
E + D S + T T+ ++ SAKI AI+ KL+ +EE
Sbjct: 131 VRRFEGFRNDKTMPPSLEPSCSGSTEDGSITTNHLSTSAKIRAIEAKLQMMEE 183
>gi|321262170|ref|XP_003195804.1| single-stranded nucleic acid binding protein [Cryptococcus gattii
WM276]
gi|317462278|gb|ADV24017.1| single-stranded nucleic acid binding protein, putative
[Cryptococcus gattii WM276]
Length = 223
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 10/133 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS YGKI DF++H G +G PRGFAFI++ K +A A K+H RL GR LVV
Sbjct: 39 IFSKYGKITKLDFMFHKTGVLKGKPRGFAFIQFLDKADALKAMVKLHDRLLRGRKLVVTY 98
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQ---MNRSAKIAAIKNKLKALEEESSSAK 117
AS +++ + E KT + Q + +A+IAA++ KL +S +
Sbjct: 99 ASSAPPDNSMLPTKGRRAEPPKTTTLSLLKSQRKPQSTAAQIAAMEAKL-------ASMQ 151
Query: 118 KQKQADNSSCNGS 130
++K AD + GS
Sbjct: 152 QRKPADENWVPGS 164
>gi|392562666|gb|EIW55846.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 317
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 20/132 (15%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +GK+ D+L+H GP +G PRG+AF+EYS +++A+ A H +L GR LVV
Sbjct: 80 LFSKFGKVSKLDYLFHKAGPLKGKPRGYAFVEYSNRDDAEKALAHAHDKLVRGRKLVV-- 137
Query: 61 ASEKYLEDAAQNSSKAVGEANK----TGFVG-GTSGQMNRS----------AKIAAIKNK 105
Y A ++S A G A+K VG T+ M +S AKIA ++ K
Sbjct: 138 ---TYANQAPLDASGAQGPASKYRRPVSDVGKPTTLSMLKSAGAGRSNATDAKIARMEAK 194
Query: 106 LKALEEESSSAK 117
L+ LE S++A+
Sbjct: 195 LRQLETTSAAAE 206
>gi|134114900|ref|XP_773748.1| hypothetical protein CNBH2010 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256376|gb|EAL19101.1| hypothetical protein CNBH2010 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 265
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS YGKI DF++H G +G PRGFAFI++ K +A A K+H RL GR LVV
Sbjct: 39 IFSKYGKITKLDFMFHKTGILKGKPRGFAFIQFLDKADALKAMVKLHDRLLRGRKLVVTY 98
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQ---MNRSAKIAAIKNKLKALEE 111
AS +++ + E KT + Q + +A+IAA++ KL ++++
Sbjct: 99 ASTAPPDNSMLPTKGRRAEPTKTTTLSLLKSQRKPQSTAAQIAAMEAKLASMQQ 152
>gi|410904299|ref|XP_003965629.1| PREDICTED: probable RNA-binding protein 18-like [Takifugu rubripes]
Length = 198
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 64/113 (56%), Gaps = 8/113 (7%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64
+G + DFL+H GP G PRG+ F+ ++T+EEA+ A ++++G+LA + LVVR A +
Sbjct: 46 FGHVKQFDFLFHKSGPLEGQPRGYCFVNFNTREEAERAIQRLNGKLALSKKLVVRWAHAQ 105
Query: 65 YLE------DAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
E Q+ + A G + T ++ SAKI AI+ KL+ +EE
Sbjct: 106 RFEGFRNEKTMPQSLEPSCSTAADEGPI--TVNHLSTSAKIRAIEAKLQMMEE 156
>gi|242212504|ref|XP_002472085.1| predicted protein [Postia placenta Mad-698-R]
gi|220728815|gb|EED82701.1| predicted protein [Postia placenta Mad-698-R]
Length = 141
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 7/121 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+ DFL+H GP +G PRG+AF+EYS +A+ A H +L GR LV+
Sbjct: 21 LFIKYGKVAKLDFLFHKSGPLKGKPRGYAFVEYSNANDAERALVSAHDKLLRGRKLVITH 80
Query: 61 ASEKYLEDAAQNS--SKAVGEANKTGFV----GGTSGQMNRS-AKIAAIKNKLKALEEES 113
A + L+ A S + V +A K + +SG+ + AKIA ++ KL+ +E+ S
Sbjct: 81 AHQAPLDHAGFGSRPRRVVNDAGKPTTLSLLKSASSGRAEATQAKIAKMEAKLRQMEQVS 140
Query: 114 S 114
+
Sbjct: 141 A 141
>gi|58271680|ref|XP_572996.1| single-stranded nucleic acid binding protein [Cryptococcus
neoformans var. neoformans JEC21]
gi|57229255|gb|AAW45689.1| single-stranded nucleic acid binding protein, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 223
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS YGKI DF++H G +G PRGFAFI++ K +A A K+H RL GR LVV
Sbjct: 39 IFSKYGKITKLDFMFHKTGILKGKPRGFAFIQFLDKADALKAMVKLHDRLLRGRKLVVTY 98
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQ---MNRSAKIAAIKNKLKALEE 111
AS +++ + E KT + Q + +A+IAA++ KL ++++
Sbjct: 99 ASTAPPDNSMLPTKGRRAEPTKTTTLSLLKSQRKPQSTAAQIAAMEAKLASMQQ 152
>gi|302674160|ref|XP_003026765.1| hypothetical protein SCHCODRAFT_238363 [Schizophyllum commune H4-8]
gi|300100449|gb|EFI91862.1| hypothetical protein SCHCODRAFT_238363 [Schizophyllum commune H4-8]
Length = 355
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+ DFL+H GP+RG PRG+AF+EY+ EEA A H RL GR LVV
Sbjct: 54 LFQRYGKVTRLDFLFHKAGPQRGKPRGYAFVEYAHAEEATNALTATHDRLLRGRRLVVTH 113
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSA-KIAAIKNKLKALEEES 113
A A S + + T S Q R+ KIA ++ KL+ +E ++
Sbjct: 114 AQH---APADGGSYQHRSQHQPTALSIIKSAQARRNGDKIAQMEAKLRQMEADT 164
>gi|428173305|gb|EKX42208.1| hypothetical protein GUITHDRAFT_111772 [Guillardia theta CCMP2712]
Length = 156
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 67/120 (55%), Gaps = 13/120 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F +GK+ D+LW T GP+RG PRG F+E+ + E A+ A +M+G+ GR ++V
Sbjct: 44 LFQQFGKLKRCDYLWFTSGPRRGQPRGICFLEFESAEGAEKAIARMNGKELHGRKIIVER 103
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNR------SAKIAAIKNKLKALEEESS 114
A +D +QN ++ G K +G + + + +A IAA+KNKL +E E+
Sbjct: 104 A-----QDHSQNKNE--GGVAKGALLGRSGAKTEKRSEVSPNAMIAALKNKLNQMEREND 156
>gi|443898501|dbj|GAC75836.1| hypothetical protein PANT_18d00091 [Pseudozyma antarctica T-34]
Length = 228
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 73/134 (54%), Gaps = 11/134 (8%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+ YGKI DFL+H GP+RG PRG+AF+EY+ +EA A HG+ GR + V A
Sbjct: 73 FANYGKIAKLDFLFHKSGPQRGQPRGYAFVEYAHADEALRALAATHGKTLRGRRIAVSFA 132
Query: 62 SEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKN---------KLKALEEE 112
S+ DA Q+++ A A++ G GQ R+ +++ KN K+ A+E +
Sbjct: 133 SK--TADADQHAAAAGVGAHRRDRRAGHDGQAARTTQLSLSKNAKQPHSTDAKIAAMEAK 190
Query: 113 SSSAKKQKQADNSS 126
+ +K K D SS
Sbjct: 191 LAHLRKAKSTDPSS 204
>gi|41387172|ref|NP_957087.1| probable RNA-binding protein 18 [Danio rerio]
gi|82237651|sp|Q6PBM8.1|RBM18_DANRE RecName: Full=Probable RNA-binding protein 18; AltName:
Full=RNA-binding motif protein 18
gi|37590400|gb|AAH59651.1| RNA binding motif protein 18 [Danio rerio]
Length = 188
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 14/114 (12%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64
+GK+ DFL+H GP G PRG+ F+ + TKEEA+ A + ++G+LA + LVVR A
Sbjct: 46 FGKVKQFDFLFHKSGPLEGQPRGYCFVNFHTKEEAERAIQCLNGKLALSKKLVVRWAH-- 103
Query: 65 YLEDAAQNSSKAVGEANKTGFVGGTSGQ-------MNRSAKIAAIKNKLKALEE 111
AQ GE N + +S + ++ +AKI AI+ KL+ +EE
Sbjct: 104 -----AQRFEPFRGEKNMPASLEPSSSEAEDLPTSLSVNAKIRAIEAKLQMMEE 152
>gi|260810959|ref|XP_002600190.1| hypothetical protein BRAFLDRAFT_118255 [Branchiostoma floridae]
gi|229285476|gb|EEN56202.1| hypothetical protein BRAFLDRAFT_118255 [Branchiostoma floridae]
Length = 203
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 64/109 (58%), Gaps = 6/109 (5%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA-SE 63
YG + DFL+H GP+ G PRG+ F+ Y T+EEA+ + M+G++A + LVVR A S
Sbjct: 58 YGTVRQLDFLFHKSGPQEGQPRGYCFVSYETREEAEKCIQAMNGKMALSKKLVVRWAHSP 117
Query: 64 KYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEE 112
+ L + QNS K ++ + +++ KI AI+ KL+ +E++
Sbjct: 118 RPL--SWQNSRKNTLQSARE---DSKESNISKQVKIQAIEAKLRMMEKQ 161
>gi|390596090|gb|EIN05493.1| hypothetical protein PUNSTDRAFT_137604 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1211
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 15/125 (12%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +GKI DFL+H GP +G PRG+AF++Y++ E+A A E+ + ++ GR + V
Sbjct: 63 VFSKFGKISKLDFLFHKSGPLKGKPRGYAFVQYASTEDAAKALERANDKMLRGRKITVTY 122
Query: 61 ASEKYLEDAAQNSSKAVGEANK--------------TGFVGGTSG-QMNRSAKIAAIKNK 105
A + L+D + + NK + G SG + S KIA ++ K
Sbjct: 123 AQQASLDDVSGYGYSSGVGGNKYRKGMMDMNKPTTLSLLKGAESGKKQGMSNKIAKMEAK 182
Query: 106 LKALE 110
L+ L+
Sbjct: 183 LRELQ 187
>gi|393222267|gb|EJD07751.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 353
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 69/124 (55%), Gaps = 10/124 (8%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F+ YGKI DFL+H GP +G PRG+AF+EY KE+A A H +L GR +VV
Sbjct: 70 VFNKYGKISKLDFLFHKSGPSKGKPRGYAFVEYREKEDALKALINAHDKLLRGRKIVVTY 129
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSA--------KIAAIKNKLKALEEE 112
A++ +++ S G+ +T T+ + +S KIAA++ KL+ +E+
Sbjct: 130 ANQAPAYESS--SIGGSGKHRRTEIQRPTTLSLIKSGSRPGKTEDKIAAMEAKLRQMEKI 187
Query: 113 SSSA 116
SS A
Sbjct: 188 SSPA 191
>gi|449545418|gb|EMD36389.1| hypothetical protein CERSUDRAFT_115394 [Ceriporiopsis subvermispora
B]
Length = 265
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 68/120 (56%), Gaps = 12/120 (10%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +GK+ D+L+H GP RG PRG+AFIEY+ +E+A+ A G+L GR LVV A
Sbjct: 50 FSKFGKVSKLDYLFHKTGPLRGKPRGYAFIEYAEQEDAQKALNGADGKLLRGRKLVVTYA 109
Query: 62 SEKYLEDAAQNSS---KAVGEANKTGFV-------GGTSGQMNRSAKIAAIKNKLKALEE 111
+ L++A +++ + EA K + G S ++ AKIA ++ KL+ LE
Sbjct: 110 HQAPLDEAGGSNARHRRPTSEAAKPTTLSLMKSVGSGRSDAVD--AKIARMEAKLRQLEH 167
>gi|384489729|gb|EIE80951.1| hypothetical protein RO3G_05656 [Rhizopus delemar RA 99-880]
Length = 175
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI D L H GPK+G+PRG+ F+EY TKE+A A +HG+ G+ +VV
Sbjct: 46 LFEPFGKITYIDSLIHWSGPKKGLPRGYCFLEYETKEQALKAINSLHGKTIKGKSIVVSF 105
Query: 61 A 61
A
Sbjct: 106 A 106
>gi|47223724|emb|CAF99333.1| unnamed protein product [Tetraodon nigroviridis]
Length = 191
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 16/118 (13%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA--- 61
+G + DFL+H GP G PRG+ F+ ++T+EEA+ A ++++G+LA + LVVR A
Sbjct: 46 FGHVKQFDFLFHKSGPLEGQPRGYCFVNFNTREEAERAIQRLNGKLALSKKLVVRWAHAQ 105
Query: 62 --------SEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
+EK + + + S E T ++ SAKI AI+ KL+ +EE
Sbjct: 106 VRRFEGFRNEKTMPQSLEPSCSTNSEDGPV-----TVNHLSTSAKIRAIEAKLQMMEE 158
>gi|326435263|gb|EGD80833.1| hypothetical protein PTSG_01419 [Salpingoeca sp. ATCC 50818]
Length = 279
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS YG+I + +FLW+ GPKRG+PRG+ F+ + A+ A K+HGR A GR +VV
Sbjct: 56 LFSKYGQIENLNFLWNKVGPKRGLPRGYCFLTFKHAASAREAVAKLHGRKAFGRAIVVSP 115
Query: 61 ASEK 64
A E+
Sbjct: 116 AHER 119
>gi|158300489|ref|XP_320390.3| AGAP012137-PA [Anopheles gambiae str. PEST]
gi|157013183|gb|EAA00474.3| AGAP012137-PA [Anopheles gambiae str. PEST]
Length = 167
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64
YGKI D L+H GP G PRG+AF+ Y +++ A ++ G+L + +VVR A
Sbjct: 15 YGKIEKFDMLFHRSGPLAGYPRGYAFVTYENHRDSESALHRLDGKLVGEKTIVVRWAKHV 74
Query: 65 YLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEES 113
E+ ++ K G GG++G +++ KI A++ KLK LE S
Sbjct: 75 NREENDRSKPKIEIPCLAGGSKGGSNGPLSQQTKIQALEAKLKMLESRS 123
>gi|443919623|gb|ELU39731.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 458
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/129 (35%), Positives = 67/129 (51%), Gaps = 10/129 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +G +V DFL+HT GP +G PRG+AF+E++TK+EA A H + R + V
Sbjct: 240 IFSTFGHVVKLDFLYHTSGPLKGKPRGYAFVEFATKQEATKALVACHDKPLRRRRITVTF 299
Query: 61 ASEK----YLEDAAQNSSKAVGEANKT--GFVGGTSGQMNRSAKIAAIKNKLKALEEESS 114
AS+ Y A + T + + + SAKIAA++ KL LE E +
Sbjct: 300 ASQNTHATYSNSGAGPHRRHAAPPKHTTLSLMKTQNKLQSTSAKIAALEAKLGVLERERT 359
Query: 115 SAKKQKQAD 123
S K+AD
Sbjct: 360 S----KEAD 364
>gi|71020131|ref|XP_760296.1| hypothetical protein UM04149.1 [Ustilago maydis 521]
gi|46100005|gb|EAK85238.1| hypothetical protein UM04149.1 [Ustilago maydis 521]
Length = 228
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +GKI DFL+H GP+RG PRG+AF+EY++ +EA A H + GR + V A
Sbjct: 63 FSKFGKISKLDFLFHKSGPQRGQPRGYAFVEYASPQEAMQAVAGAHNKTLKGRSISVTFA 122
Query: 62 SEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKN 104
+ + A N+ +G + T M ++ +++ KN
Sbjct: 123 T----KSADGNAPTGIGPHRRDRRTAATESDMLKTTQLSLSKN 161
>gi|328770055|gb|EGF80097.1| hypothetical protein BATDEDRAFT_24846 [Batrachochytrium
dendrobatidis JAM81]
Length = 267
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGKI D+LWH GPK G+PRG+ F+E + E+A A ++ ++ GRPL V
Sbjct: 61 LFEEYGKIARIDYLWHQEGPKHGMPRGYCFVEMDSVEDAGRALAALNRKVVAGRPLSVAY 120
Query: 61 A---SEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKI-AAIKNKLKALEEESSSA 116
+ SE D + + +T + + ++ + +I++K+K LE + A
Sbjct: 121 SAAKSEVPESDGLTGWQRRAAKEAQTAAIASVNQKLQVKPNMGGSIESKIKTLERK--LA 178
Query: 117 KKQKQADNSSCNGSLNCLS 135
+ Q+ ++SS + + +S
Sbjct: 179 QIQQTVNSSSILNTEDVIS 197
>gi|395331590|gb|EJF63971.1| hypothetical protein DICSQDRAFT_168016 [Dichomitus squalens
LYAD-421 SS1]
Length = 325
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 71/129 (55%), Gaps = 15/129 (11%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +GKI D+L+H GP +G PRG+AF++YS K++A+ A + +L GR LVV A
Sbjct: 81 FSKFGKISKLDYLFHKSGPLKGKPRGYAFVQYSNKDDAEKALTHANDKLLRGRKLVVTYA 140
Query: 62 SEKYLEDAAQNSS------KAVGEANKTGFVG-------GTSGQMNRSAKIAAIKNKLKA 108
++ L+ A+ +A+ E K + G S M+ AKIA ++ KL+
Sbjct: 141 NQAPLDAASGALGAGAKNRRAISEVGKPTTLSLLKSAGRGRSDAMD--AKIARMEAKLRQ 198
Query: 109 LEEESSSAK 117
LE S++ +
Sbjct: 199 LEGASAAPR 207
>gi|442756865|gb|JAA70591.1| Putative u1 small nuclear ribonucleoprotein rrm superfamily [Ixodes
ricinus]
Length = 148
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 63/109 (57%), Gaps = 7/109 (6%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64
YG + DFL+H GP +G PRG+ F+ Y TK +A+ A + +HG+L + LV + A+
Sbjct: 42 YGNVKKFDFLFHKAGPLKGHPRGYCFVTYETKPQAEHALQCLHGKLMLSKTLVAKWANNV 101
Query: 65 YLED-AAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEE 112
ED A+ + +G + V +N +++I+AI+ KLKA+E +
Sbjct: 102 PTEDLTARRPAPLLGAKKEQKPV------VNVNSQISAIEAKLKAMERD 144
>gi|336366002|gb|EGN94350.1| hypothetical protein SERLA73DRAFT_188191 [Serpula lacrymans var.
lacrymans S7.3]
Length = 298
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 67/118 (56%), Gaps = 8/118 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +GKI DFL+H GP +G PRG+AF+E+ +++A A + + +L GR LVV
Sbjct: 66 IFSKFGKISKLDFLFHKTGPSKGKPRGYAFVEFINQKDANKALDGANDKLLRGRKLVVTY 125
Query: 61 ASEKYLED---AAQNSSKAVGEANKTGFV----GGTSGQMNRSA-KIAAIKNKLKALE 110
A + L+ A N + + +A + + T G+ +R+ KIA ++ KL+ +E
Sbjct: 126 AHQAPLDQNAGGAYNGKRRMADAYRPTALSILKSATGGRQDRTKDKIAQMEAKLRQME 183
>gi|392578883|gb|EIW72010.1| hypothetical protein TREMEDRAFT_58152 [Tremella mesenterica DSM
1558]
Length = 2267
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+ YGK+ DF++H GP +G PRG+AF+EYS K++A A K+H RL GR LVV
Sbjct: 48 ILGKYGKVTKLDFIFHRNGPLKGKPRGYAFVEYSDKDDALKAMIKLHNRLLRGRNLVVTP 107
Query: 61 AS 62
A+
Sbjct: 108 AN 109
>gi|148227152|ref|NP_001087622.1| probable RNA-binding protein 18 [Xenopus laevis]
gi|82234465|sp|Q66J99.1|RBM18_XENLA RecName: Full=Probable RNA-binding protein 18; AltName:
Full=RNA-binding motif protein 18
gi|51704094|gb|AAH81007.1| MGC81467 protein [Xenopus laevis]
Length = 190
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+ +GK+ DFL+H GP G PRG+ F+ + TK EA+ A ++G++A + LVVR
Sbjct: 44 LLQKFGKVKQFDFLFHKSGPLEGQPRGYCFVNFETKAEAERAIHCLNGKMALSKKLVVRW 103
Query: 61 AS---EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
A ++Y D +N + T ++ SAKI AI+ KLK + E
Sbjct: 104 AHAQIKRY--DNCKNEKVLPISLEPSSSTEPTQSTLSVSAKIKAIEAKLKMMAE 155
>gi|392586723|gb|EIW76059.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 333
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 66/136 (48%), Gaps = 20/136 (14%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +GK+ DFL+H GP RG PRG+AF+EY+ + +A+ A +G+L GR L+V
Sbjct: 74 VFSKFGKVTKLDFLFHKSGPNRGKPRGYAFVEYAEEADARKAVANANGKLLRGRKLMVSH 133
Query: 61 ASEKYLEDAAQNSS--------------KAVGEANKTGF----VGGTSGQMN--RSAKIA 100
A E E A +S + E T G G N S KIA
Sbjct: 134 AQEASPEALAASSHNYGYTPGQHGSERRRIAAEHQPTALSLLKSAGQHGHRNDGMSNKIA 193
Query: 101 AIKNKLKALEEESSSA 116
++ KL+ +EE + A
Sbjct: 194 QLEAKLRQMEEPARRA 209
>gi|409037748|gb|EKM48138.1| hypothetical protein PHACADRAFT_214938 [Phanerochaete carnosa
HHB-10118-sp]
Length = 272
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS YGKI DFL+H GP +G PRG+AF+EY+ + +A A H +L GR LVV
Sbjct: 58 VFSKYGKISKLDFLFHKTGPLKGKPRGYAFVEYADENDAAKALVSAHDKLLRGRKLVVTY 117
Query: 61 ASE 63
A +
Sbjct: 118 AQQ 120
>gi|89266867|emb|CAJ83925.1| RNA binding motif protein 18 [Xenopus (Silurana) tropicalis]
Length = 190
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64
+GK+ DFL+H GP G PRG+ F+ + TK EA+ A ++G++A + LVVR A +
Sbjct: 48 FGKVKQFDFLFHKSGPLEGQPRGYCFVNFETKAEAERAIHCLNGKMALSKKLVVRWAHAQ 107
Query: 65 YLEDAAQNSSKAVG-EANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
S K + + T ++ SAKI AI+ KLK + E
Sbjct: 108 IKRYDNYKSEKVLPISLEPSSSTEPTQSTLSVSAKIKAIEAKLKMMAE 155
>gi|358058018|dbj|GAA96263.1| hypothetical protein E5Q_02928 [Mixia osmundae IAM 14324]
Length = 274
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F+ YGKIV D L+HT GP +G PRG+ F+E+ EA+ A+ ++H +L GR L+V
Sbjct: 32 LFTKYGKIVKLDVLYHTAGPLKGKPRGYGFVEFEQTWEAERAQLELHDKLIRGRKLIVSW 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|343425209|emb|CBQ68745.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 231
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 65/125 (52%), Gaps = 18/125 (14%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +GKI DFL+H GP+RG PRG+AF+EY++ EEA A + GR + V A
Sbjct: 69 FSKFGKIKKLDFLFHKSGPQRGQPRGYAFVEYTSAEEALQAVAGARDKTLRGRKISVTFA 128
Query: 62 SEKYLEDAAQNSSKAVG---EANKTGFV--GGTSGQMNRS----------AKIAAIKNKL 106
S+ D+ SS VG +TGF + Q++ S AKIAA++ KL
Sbjct: 129 SKS--TDSVDTSS-GVGPHRRDRRTGFENDAAKTTQLSLSKNAKQPHGTNAKIAAMEAKL 185
Query: 107 KALEE 111
L +
Sbjct: 186 AKLRQ 190
>gi|388855678|emb|CCF50666.1| uncharacterized protein [Ustilago hordei]
Length = 236
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 7/117 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +GKI DFL+H GP+RG RG+AF+EY++ +EA A H + GR + V+ A
Sbjct: 78 FSKFGKISKLDFLFHKSGPQRGQARGYAFVEYASAQEALEAVVGAHDKTLRGRKISVKFA 137
Query: 62 SEKYLEDAA------QNSSKAVGEANKTGFVGGTSGQMN-RSAKIAAIKNKLKALEE 111
S+ AA Q + G N+T + + Q + AKIAA++ KL + +
Sbjct: 138 SKNDESGAASGAVGPQRRDRRAGAENETIKISRQAKQRHGTDAKIAAMEAKLAKMRQ 194
>gi|422293275|gb|EKU20575.1| hypothetical protein NGA_2120310, partial [Nannochloropsis
gaditana CCMP526]
gi|422295846|gb|EKU23145.1| hypothetical protein NGA_2120320, partial [Nannochloropsis
gaditana CCMP526]
Length = 170
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVR 59
+F PYGK+V F WH GP++G P+GF F+ YS EEA A + R GR + VR
Sbjct: 33 LFLPYGKVVDIAFFWHMHGPRKGEPKGFCFVTYSGTEEATSAIRALDRRRLHGRSIAVR 91
>gi|427782105|gb|JAA56504.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15 [Rhipicephalus pulchellus]
Length = 187
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64
YG + DFL+H GP +G PRG+ F+ Y TKE+A+ A +HG+L + LV + A+
Sbjct: 42 YGNVKKFDFLFHKAGPLKGHPRGYCFVTYETKEQAEHALSCLHGKLVFSKTLVAKWANNL 101
Query: 65 YLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEE 112
D A+ +G A K +N +++I AI+ KL+A+E +
Sbjct: 102 PSVDLAKRRQGLGLGVAKKE-----QKPTLNVNSQIHAIEAKLRAMERD 145
>gi|395505635|ref|XP_003757145.1| PREDICTED: probable RNA-binding protein 18 isoform 1 [Sarcophilus
harrisii]
Length = 190
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+ +GK+ DFL+H G G PRG+ F+ + TK+EA+ A + ++G+LA + LVVR
Sbjct: 44 LLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRW 103
Query: 61 AS---EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
A ++Y D +N + T ++ SAKI AI+ KLK + E
Sbjct: 104 AHAQVKRY--DHNKNDKILPISLEPSSSTEPTQSNLSVSAKIKAIEAKLKMMAE 155
>gi|157127057|ref|XP_001654782.1| hypothetical protein AaeL_AAEL000272 [Aedes aegypti]
gi|108884487|gb|EAT48712.1| AAEL000272-PA [Aedes aegypti]
Length = 157
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%)
Query: 13 FLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQN 72
L+H GP G PRG+AF+ Y ++++++A E ++G+L + +VVR A ++ +
Sbjct: 1 MLFHRSGPMAGYPRGYAFVTYERQKDSEIALEVLNGKLVGDKHMVVRWAKNVNRDEMEKT 60
Query: 73 SSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEES 113
K A G G SG M++ KI A++ KLK +E S
Sbjct: 61 KPKLQIPALAGGSKAGPSGPMSQQTKIQALEAKLKMMESRS 101
>gi|345329742|ref|XP_003431414.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein
18-like [Ornithorhynchus anatinus]
Length = 190
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+ +GK+ DFL+H G G PRG+ F+ + TK+EA+ A + ++G+LA + LVVR
Sbjct: 44 LLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRW 103
Query: 61 AS---EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
A ++Y D +N + T ++ SAKI AI+ KLK + E
Sbjct: 104 AHAQIKRY--DHNKNDKILPISLEPSSSTEPTQSNLSVSAKIKAIEAKLKMMAE 155
>gi|157821759|ref|NP_001101308.1| probable RNA-binding protein 18 [Rattus norvegicus]
gi|149038908|gb|EDL93128.1| RNA binding motif protein 18 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 190
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLAS-- 62
+GK+ DFL+H G G PRG+ F+ + TK+EA+ A + ++G+LA + LVVR A
Sbjct: 48 FGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQ 107
Query: 63 -EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
++Y D +N + T ++ +AKI AI+ KLK + E
Sbjct: 108 VKRY--DHNKNDKILPISLEPSSSTEATQSNLSVTAKIKAIEAKLKMMAE 155
>gi|197246835|gb|AAI68896.1| RNA binding motif protein 18 [Rattus norvegicus]
Length = 190
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLAS-- 62
+GK+ DFL+H G G PRG+ F+ + TK+EA+ A + ++G+LA + LVVR A
Sbjct: 48 FGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQ 107
Query: 63 -EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
++Y D +N + T ++ +AKI AI+ KLK + E
Sbjct: 108 VKRY--DHNKNDKILPISLEPSSSTEATQSNLSVTAKIKAIEAKLKMMAE 155
>gi|90083158|dbj|BAE90661.1| unnamed protein product [Macaca fascicularis]
Length = 190
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+ +GK+ DFL+H G G PRG+ F+ + TK+EA+ A + ++G+LA + LVVR
Sbjct: 44 LLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRW 103
Query: 61 AS---EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
A ++Y D +N + T ++ +AKI AI+ KLK + E
Sbjct: 104 AHAQVKRY--DHNKNDKILPISLEPSSSTEPTQSNLSVTAKIKAIEAKLKMMAE 155
>gi|348570154|ref|XP_003470862.1| PREDICTED: probable RNA-binding protein 18-like isoform 1 [Cavia
porcellus]
Length = 190
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+ +GK+ DFL+H G G PRG+ F+ + TK+EA+ A + ++G+LA + LVVR
Sbjct: 44 LLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRW 103
Query: 61 AS---EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
A ++Y D +N + T ++ +AKI AI+ KLK + E
Sbjct: 104 AHAQIKRY--DHNKNDKILPISLEPSSSTEPTQSNLSVTAKIKAIEAKLKMMAE 155
>gi|312385311|gb|EFR29841.1| hypothetical protein AND_00921 [Anopheles darlingi]
Length = 161
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%)
Query: 13 FLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQN 72
L+H GP G PRG+AF+ Y ++++ A +++ G++ + +VVR A +DA +N
Sbjct: 1 MLFHRSGPLAGYPRGYAFVTYENHQDSQSALKRLDGKVVGEKTIVVRWAKHVNRDDADRN 60
Query: 73 SSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEES 113
K G GG +G +++ KI A++ +LK LE S
Sbjct: 61 KPKIEIPCLAGGSKGGPNGPVSQQTKIQALEARLKMLESRS 101
>gi|344271979|ref|XP_003407814.1| PREDICTED: probable RNA-binding protein 18-like [Loxodonta
africana]
Length = 190
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+ +GK+ DFL+H G G PRG+ F+ + TK+EA+ A + ++G+LA + LVVR
Sbjct: 44 LLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRW 103
Query: 61 AS---EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
A ++Y D +N + T ++ +AKI AI+ KLK + E
Sbjct: 104 AHAQVKRY--DHNKNDKILPISLEPSSSTEPTQSNLSVTAKIKAIEAKLKMMAE 155
>gi|351694309|gb|EHA97227.1| Putative RNA-binding protein 18 [Heterocephalus glaber]
Length = 190
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+ +GK+ DFL+H G G PRG+ F+ + TK+EA+ A + ++G+LA + LVVR
Sbjct: 44 LLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRW 103
Query: 61 AS---EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
A ++Y D +N + T ++ +AKI AI+ KLK + E
Sbjct: 104 AHAQIKRY--DHNKNDKILPISLEPSSSTEPTQSNLSVTAKIKAIEAKLKMMAE 155
>gi|389742753|gb|EIM83939.1| RNA-binding domain-containing protein, partial [Stereum hirsutum
FP-91666 SS1]
Length = 183
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +GK+ + D+L+H GP +G PRG+AF+EY +A+ A K H +L GR LVV
Sbjct: 64 IFSKFGKLSNLDYLFHKSGPLKGKPRGYAFVEYVDPADAERALTKAHDKLLRGRRLVVTF 123
Query: 61 A----SEKYLEDAAQNSSKAVGEANKTGFV----GGTSGQMNRSA-KIAAIKNKLKALEE 111
A ++ + + + V EA + + G +R+ KIA ++ KL+ LE+
Sbjct: 124 AHQAPTDAFPGGGDRGYRRMVNEAGRPTALSLLKSAQEGGRDRTKDKIAIMEAKLRQLEK 183
>gi|14916461|ref|NP_149108.1| probable RNA-binding protein 18 [Homo sapiens]
gi|197102628|ref|NP_001126470.1| probable RNA-binding protein 18 [Pongo abelii]
gi|386780890|ref|NP_001247794.1| probable RNA-binding protein 18 [Macaca mulatta]
gi|55632227|ref|XP_520236.1| PREDICTED: uncharacterized protein LOC464711 isoform 2 [Pan
troglodytes]
gi|114626544|ref|XP_001136501.1| PREDICTED: uncharacterized protein LOC464711 isoform 1 [Pan
troglodytes]
gi|296190735|ref|XP_002743314.1| PREDICTED: probable RNA-binding protein 18 isoform 2 [Callithrix
jacchus]
gi|332229929|ref|XP_003264139.1| PREDICTED: probable RNA-binding protein 18 isoform 1 [Nomascus
leucogenys]
gi|332229931|ref|XP_003264140.1| PREDICTED: probable RNA-binding protein 18 isoform 2 [Nomascus
leucogenys]
gi|395824121|ref|XP_003785319.1| PREDICTED: probable RNA-binding protein 18 [Otolemur garnettii]
gi|397526515|ref|XP_003833168.1| PREDICTED: probable RNA-binding protein 18 [Pan paniscus]
gi|402896487|ref|XP_003911329.1| PREDICTED: probable RNA-binding protein 18 [Papio anubis]
gi|403266051|ref|XP_003925211.1| PREDICTED: probable RNA-binding protein 18 [Saimiri boliviensis
boliviensis]
gi|426362933|ref|XP_004048604.1| PREDICTED: probable RNA-binding protein 18 isoform 1 [Gorilla
gorilla gorilla]
gi|426362935|ref|XP_004048605.1| PREDICTED: probable RNA-binding protein 18 isoform 2 [Gorilla
gorilla gorilla]
gi|74762658|sp|Q96H35.1|RBM18_HUMAN RecName: Full=Probable RNA-binding protein 18; AltName:
Full=RNA-binding motif protein 18
gi|75070549|sp|Q5R6W3.1|RBM18_PONAB RecName: Full=Probable RNA-binding protein 18; AltName:
Full=RNA-binding motif protein 18
gi|14286288|gb|AAH08942.1| RNA binding motif protein 18 [Homo sapiens]
gi|17939516|gb|AAH19319.1| RNA binding motif protein 18 [Homo sapiens]
gi|55731580|emb|CAH92497.1| hypothetical protein [Pongo abelii]
gi|90082160|dbj|BAE90361.1| unnamed protein product [Macaca fascicularis]
gi|119607924|gb|EAW87518.1| RNA binding motif protein 18, isoform CRA_a [Homo sapiens]
gi|193786628|dbj|BAG51951.1| unnamed protein product [Homo sapiens]
gi|261859206|dbj|BAI46125.1| RNA binding motif protein 18 [synthetic construct]
gi|355567464|gb|EHH23805.1| RNA-binding motif protein 18 [Macaca mulatta]
gi|355753053|gb|EHH57099.1| RNA-binding motif protein 18 [Macaca fascicularis]
gi|380785643|gb|AFE64697.1| probable RNA-binding protein 18 [Macaca mulatta]
gi|383409843|gb|AFH28135.1| putative RNA-binding protein 18 [Macaca mulatta]
gi|384950330|gb|AFI38770.1| putative RNA-binding protein 18 [Macaca mulatta]
gi|410306632|gb|JAA31916.1| RNA binding motif protein 18 [Pan troglodytes]
gi|410332431|gb|JAA35162.1| RNA binding motif protein 18 [Pan troglodytes]
Length = 190
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+ +GK+ DFL+H G G PRG+ F+ + TK+EA+ A + ++G+LA + LVVR
Sbjct: 44 LLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRW 103
Query: 61 AS---EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
A ++Y D +N + T ++ +AKI AI+ KLK + E
Sbjct: 104 AHAQVKRY--DHNKNDKILPISLEPSSSTEPTQSNLSVTAKIKAIEAKLKMMAE 155
>gi|354500649|ref|XP_003512411.1| PREDICTED: probable RNA-binding protein 18-like, partial
[Cricetulus griseus]
Length = 162
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLAS-- 62
+GK+ DFL+H G G PRG+ F+ + TK+EA+ A + ++G+LA + LVVR A
Sbjct: 20 FGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQ 79
Query: 63 -EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
++Y D +N + T ++ +AKI AI+ KLK + E
Sbjct: 80 VKRY--DHNKNDKILPISLEPSSSTEPTQSNLSVTAKIKAIEAKLKMMAE 127
>gi|344241261|gb|EGV97364.1| putative RNA-binding protein 18 [Cricetulus griseus]
Length = 164
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLAS-- 62
+GK+ DFL+H G G PRG+ F+ + TK+EA+ A + ++G+LA + LVVR A
Sbjct: 22 FGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQ 81
Query: 63 -EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
++Y D +N + T ++ +AKI AI+ KLK + E
Sbjct: 82 VKRY--DHNKNDKILPISLEPSSSTEPTQSNLSVTAKIKAIEAKLKMMAE 129
>gi|291408421|ref|XP_002720542.1| PREDICTED: RNA binding motif protein 18 [Oryctolagus cuniculus]
Length = 190
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLAS-- 62
+GK+ DFL+H G G PRG+ F+ + TK+EA+ A + ++G+LA + LVVR A
Sbjct: 48 FGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQ 107
Query: 63 -EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
++Y D +N + T ++ +AKI AI+ KLK + E
Sbjct: 108 VKRY--DHNKNDKILPISLEPSSSTEPTQSNLSVTAKIKAIEAKLKMMAE 155
>gi|444724031|gb|ELW64653.1| putative RNA-binding protein 18 [Tupaia chinensis]
Length = 155
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLAS-- 62
+GK+ DFL+H G G PRG+ F+ + TK+EA+ A + ++G+LA + LVVR A
Sbjct: 13 FGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQ 72
Query: 63 -EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
++Y D +N + T ++ +AKI AI+ KLK + E
Sbjct: 73 VKRY--DHNKNDKILPISLEPSSSTEPTQSNLSVTAKIKAIEAKLKMMAE 120
>gi|126294195|ref|XP_001370439.1| PREDICTED: probable RNA-binding protein 18-like [Monodelphis
domestica]
Length = 189
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+ +GK+ DFL+H G G PRG+ F+ + TK+EA+ A + ++G+LA + LVVR
Sbjct: 43 LLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRW 102
Query: 61 AS---EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
A ++Y D +N + + ++ SAKI AI+ KLK + E
Sbjct: 103 AHAQVKRY--DHNKNDKILPISLEPSSSTEPSQSNLSVSAKIKAIEAKLKMMAE 154
>gi|26331262|dbj|BAC29361.1| unnamed protein product [Mus musculus]
Length = 190
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+ +GK+ DFL+H G G PRG+ F+ + TK+EA+ A + ++G+LA + LVVR
Sbjct: 44 LLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRW 103
Query: 61 AS---EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
A ++Y D +N + ++ +AKI AI++KLK + E
Sbjct: 104 AHAQVKRY--DHNKNDKILPISLEPSSSTEPAQSNLSVTAKIKAIESKLKMMAE 155
>gi|224073895|ref|XP_002188154.1| PREDICTED: probable RNA-binding protein 18 [Taeniopygia guttata]
Length = 223
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLAS-- 62
+GK+ DFL+H G G PRG+ F+ + TK+EA+ A + ++G+LA + LVVR A
Sbjct: 81 FGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEKAIQCLNGKLALSKKLVVRWAHAQ 140
Query: 63 -EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
++Y D +N + ++ SAKI AI+ KLK + E
Sbjct: 141 VKRY--DHNKNEKILPISLEPSSSTEPPQSNLSVSAKIKAIEAKLKMMAE 188
>gi|58332318|ref|NP_001011054.1| RNA binding motif protein 18 [Xenopus (Silurana) tropicalis]
gi|54037949|gb|AAH84179.1| RNA binding motif protein 18 [Xenopus (Silurana) tropicalis]
Length = 181
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 12/109 (11%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV--RLAS 62
+GK+ DFL+H GP G PRG+ F+ + TK EA+ A ++G++A + LV S
Sbjct: 48 FGKVKQFDFLFHKSGPLEGQPRGYCFVNFETKAEAERAIHCLNGKMALSKKLVRYDNYKS 107
Query: 63 EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
EK L + + SS T ++ SAKI AI+ KLK + E
Sbjct: 108 EKVLPISLEPSSS----------TEPTQSTLSVSAKIKAIEAKLKMMAE 146
>gi|355715633|gb|AES05390.1| RNA binding motif protein 18 [Mustela putorius furo]
Length = 189
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+ +G + DFL+H G G PRG+ F+ + TK+EA+ A + ++G+LA + LVVR
Sbjct: 44 LLQKFGTVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRW 103
Query: 61 AS---EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
A ++Y D +N + T ++ +AKI AI+ KLK + E
Sbjct: 104 AHAQVKRY--DHNKNDKILPISLEPSSSTEPTQSNLSVTAKIKAIEAKLKMMAE 155
>gi|449268602|gb|EMC79458.1| putative RNA-binding protein 18 [Columba livia]
Length = 159
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLAS-- 62
+GK+ DFL+H G G PRG+ F+ + TK+EA+ A + ++G+LA + LVVR A
Sbjct: 17 FGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEKAIQCLNGKLALSKKLVVRWAHAQ 76
Query: 63 -EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
++Y D +N + ++ SAKI AI+ KLK + E
Sbjct: 77 VKRY--DHNKNEKILPISLEPSSSTEPPQSNLSVSAKIKAIEAKLKMMAE 124
>gi|73968250|ref|XP_548474.2| PREDICTED: probable RNA-binding protein 18 [Canis lupus familiaris]
gi|149738072|ref|XP_001504763.1| PREDICTED: probable RNA-binding protein 18-like [Equus caballus]
gi|301760408|ref|XP_002915995.1| PREDICTED: probable RNA-binding protein 18-like [Ailuropoda
melanoleuca]
gi|281337699|gb|EFB13283.1| hypothetical protein PANDA_004029 [Ailuropoda melanoleuca]
gi|417396779|gb|JAA45423.1| Putative splicing factor 3b subunit 4 [Desmodus rotundus]
Length = 190
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+ +G + DFL+H G G PRG+ F+ + TK+EA+ A + ++G+LA + LVVR
Sbjct: 44 LLQKFGTVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRW 103
Query: 61 AS---EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
A ++Y D +N + T ++ +AKI AI+ KLK + E
Sbjct: 104 AHAQVKRY--DHNKNDKILPISLEPSSSTEPTQSNLSVTAKIKAIEAKLKMMAE 155
>gi|387018164|gb|AFJ51200.1| RNA binding motif protein 18 [Crotalus adamanteus]
Length = 194
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLAS-- 62
+GK+ DFL+H G G PRG+ F+ + TK+EA+ A ++G+LA + LVVR A
Sbjct: 52 FGKVKQFDFLFHKSGVLEGQPRGYCFVNFETKQEAEQAIHCLNGKLALSKKLVVRWAHAQ 111
Query: 63 -EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
++Y D +N + ++ S KI AI+ KLK + E
Sbjct: 112 VKRY--DQNKNEKTLPISLEPSSSTESPQSNLSVSTKIKAIETKLKMMSE 159
>gi|50757137|ref|XP_415396.1| PREDICTED: probable RNA-binding protein 18 [Gallus gallus]
Length = 190
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLAS-- 62
+GK+ DFL+H G G PRG+ F+ + TK+EA+ A + ++G+LA + LVVR A
Sbjct: 48 FGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEKAIQCLNGKLALSKKLVVRWAHAQ 107
Query: 63 -EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
++Y D +N + ++ SAKI AI+ KLK + E
Sbjct: 108 VKRY--DHNKNEKILPISLEPSSSTEPPQSNLSVSAKIKAIEAKLKMMAE 155
>gi|336378677|gb|EGO19834.1| hypothetical protein SERLADRAFT_401051 [Serpula lacrymans var.
lacrymans S7.9]
Length = 176
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +GKI DFL+H GP +G PRG+AF+E+ +++A A + + +L GR LVV
Sbjct: 66 IFSKFGKISKLDFLFHKTGPSKGKPRGYAFVEFINQKDANKALDGANDKLLRGRKLVVTY 125
Query: 61 ASEKYLEDAA 70
A + L+ A
Sbjct: 126 AHQAPLDQNA 135
>gi|13385930|ref|NP_080710.1| probable RNA-binding protein 18 isoform 1 [Mus musculus]
gi|81916775|sp|Q9CR83.1|RBM18_MOUSE RecName: Full=Probable RNA-binding protein 18; AltName:
Full=RNA-binding motif protein 18
gi|12842090|dbj|BAB25466.1| unnamed protein product [Mus musculus]
gi|12862070|dbj|BAB32344.1| unnamed protein product [Mus musculus]
gi|13529665|gb|AAH05540.1| RNA binding motif protein 18 [Mus musculus]
gi|26330626|dbj|BAC29043.1| unnamed protein product [Mus musculus]
gi|148676725|gb|EDL08672.1| RNA binding motif protein 18, isoform CRA_b [Mus musculus]
Length = 190
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+ +GK+ DFL+H G G PRG+ F+ + TK+EA+ A + ++G+LA + LVVR
Sbjct: 44 LLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRW 103
Query: 61 AS---EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
A ++Y D +N + ++ +AKI AI+ KLK + E
Sbjct: 104 AHAQVKRY--DHNKNDKILPISLEPSSSTEPAQSNLSVTAKIKAIEAKLKMMAE 155
>gi|403170092|ref|XP_003329487.2| hypothetical protein PGTG_11237 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168561|gb|EFP85068.2| hypothetical protein PGTG_11237 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 372
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 26/163 (15%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +GKI DFL+H G RG PRG+AFIE + ++EA A +++ + G+ ++V
Sbjct: 38 LFSKFGKISKLDFLFHKSGVLRGKPRGYAFIEMNRRDEALKAMVELNNKAVRGKRILVTQ 97
Query: 61 ASE-KYLEDAAQNSSKA-VGEANKTGFVGGTSGQMNRSA--------------------- 97
A+E +Y E A N SK N + G +GQ R A
Sbjct: 98 ANESQYQEHQAANQSKPNHSHQNNSNNHQGRAGQRGRPAGPDPMRPTTLSILKSQQQPKG 157
Query: 98 ---KIAAIKNKLKALEEESSSAKKQKQADNSSCNGSLNCLSGK 137
KIAA++ KL ++++ + + + NS + + LS K
Sbjct: 158 VNNKIAALEAKLASMQQTGTLSTATPSSSNSLVPSASSLLSSK 200
>gi|158284352|ref|XP_306307.3| Anopheles gambiae str. PEST AGAP012853-PA [Anopheles gambiae str.
PEST]
gi|157021097|gb|EAA45849.3| AGAP012853-PA [Anopheles gambiae str. PEST]
Length = 103
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%)
Query: 13 FLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQN 72
L+H GP G PRG+AF+ Y +++ A ++ G+L + +VVR A E+ ++
Sbjct: 1 MLFHRSGPLAGYPRGYAFVTYENHRDSESALHRLDGKLVGEKTIVVRWAKHVNREENDRS 60
Query: 73 SSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEES 113
K G GG++G +++ KI A++ KLK LE S
Sbjct: 61 KPKIEIPCLAGGSKGGSNGPLSQQTKIQALEAKLKMLESRS 101
>gi|321470441|gb|EFX81417.1| hypothetical protein DAPPUDRAFT_224305 [Daphnia pulex]
Length = 203
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F G I ++L+H GP+ G PRG+AF+ +S +EEA A+++ G+ GR L+V+
Sbjct: 43 LFQNAGTIDKLEYLFHKIGPQAGQPRGYAFLTFSKREEAIRARKEFDGKSLLGRTLLVKP 102
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSS 115
A +D + +G ++N +I AI++KLK +E S++
Sbjct: 103 ARSVQKDDLTGPKTTQFSIPALSG-AKDNKNKLNLEQQIKAIESKLKTMENSSAT 156
>gi|440906625|gb|ELR56865.1| Putative RNA-binding protein 18 [Bos grunniens mutus]
Length = 190
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+ +G + DFL+H G G PRG+ F+ + TK+EA+ A + ++G+LA + LVVR
Sbjct: 44 LLQKFGTVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRW 103
Query: 61 AS---EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
A ++Y D ++N + ++ +AKI AI+ KLK + E
Sbjct: 104 AHAQVKRY--DHSKNDKILPISLEPSSSTEPAQSNLSVTAKIKAIEAKLKMMAE 155
>gi|401883786|gb|EJT47973.1| single-stranded nucleic acid binding protein [Trichosporon asahii
var. asahii CBS 2479]
gi|406696308|gb|EKC99600.1| single-stranded nucleic acid binding protein [Trichosporon asahii
var. asahii CBS 8904]
Length = 206
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGKI D ++H GP++G PRG+AF+E+S K+ +H RL G+ L+V
Sbjct: 40 VFGKYGKITRLDVMYHKTGPQKGKPRGYAFVEFSNKD--------LHDRLLRGKKLIVTY 91
Query: 61 ASEKYLED 68
AS ED
Sbjct: 92 ASAAPAED 99
>gi|77735601|ref|NP_001029496.1| probable RNA-binding protein 18 [Bos taurus]
gi|426223094|ref|XP_004005714.1| PREDICTED: probable RNA-binding protein 18 [Ovis aries]
gi|118577827|sp|Q3ZCC5.1|RBM18_BOVIN RecName: Full=Probable RNA-binding protein 18; AltName:
Full=RNA-binding motif protein 18
gi|73587309|gb|AAI02519.1| RNA binding motif protein 18 [Bos taurus]
gi|296482270|tpg|DAA24385.1| TPA: probable RNA-binding protein 18 [Bos taurus]
Length = 190
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 5/114 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+ +G + DFL+H G G PRG+ F+ + TK+EA+ A + ++G+LA + LVVR
Sbjct: 44 LLQKFGTVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRW 103
Query: 61 AS---EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
A ++Y D +N + ++ +AKI AI+ KLK + E
Sbjct: 104 AHAQVKRY--DHNKNDKILPISLEPSSSTEPAQSNLSVTAKIKAIEAKLKMMAE 155
>gi|194033497|ref|XP_001925831.1| PREDICTED: probable RNA-binding protein 18 isoform 1 [Sus scrofa]
gi|194033499|ref|XP_001925851.1| PREDICTED: probable RNA-binding protein 18 isoform 2 [Sus scrofa]
Length = 190
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 5/114 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+ +G + DFL+H G G PRG+ F+ + TK+EA+ A ++G+LA + LVVR
Sbjct: 44 LLQKFGTVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAIHCLNGKLALSKKLVVRW 103
Query: 61 AS---EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
A ++Y D +N + ++ +AKI AI+ KLK + E
Sbjct: 104 AHAQVKRY--DHNKNDKILPISLEPSSSTEPAQSNLSVTAKIKAIEAKLKMMAE 155
>gi|238571652|ref|XP_002387088.1| hypothetical protein MPER_14394 [Moniliophthora perniciosa FA553]
gi|215440943|gb|EEB88018.1| hypothetical protein MPER_14394 [Moniliophthora perniciosa FA553]
Length = 70
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
+F+ YGKI D L+H GP +G PRG+ F+EY++ +EA L H +L GR LVV
Sbjct: 11 LFAKYGKITKLDLLFHKTGPLKGKPRGYCFVEYASNDEA-LRALSAHDKLLRGRKLVV 67
>gi|346468475|gb|AEO34082.1| hypothetical protein [Amblyomma maculatum]
Length = 137
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLAS 62
YG + DFL+H GP +G PRG+ F+ Y TKE+A+ A +HG+L + LV + A+
Sbjct: 42 YGNVKKFDFLFHKAGPLKGHPRGYCFVTYETKEQAEHALSCLHGKLVFSKTLVAKWAN 99
>gi|388579701|gb|EIM20022.1| hypothetical protein WALSEDRAFT_10945, partial [Wallemia sebi CBS
633.66]
Length = 62
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLV 57
F +GKI D+L+HT GP G PRG+AFIEY + +A AKE H R G+ +V
Sbjct: 7 FKTFGKIKKLDYLYHTSGPYEGRPRGYAFIEYESLLDATTAKELSHKRAFDGKLIV 62
>gi|119607925|gb|EAW87519.1| RNA binding motif protein 18, isoform CRA_b [Homo sapiens]
Length = 146
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+ +GK+ DFL+H G G PRG+ F+ + TK+EA+ A + ++G+LA + LVVR
Sbjct: 44 LLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRW 103
Query: 61 A 61
A
Sbjct: 104 A 104
>gi|380028093|ref|XP_003697746.1| PREDICTED: probable RNA-binding protein 18-like [Apis florea]
Length = 212
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64
+G I D L+H GP+ G PRG+AF+ Y T ++AK AK+ +H + ++VR A
Sbjct: 54 HGTIEKFDLLFHRSGPQAGQPRGYAFVTYKTIQDAKTAKDALHNLKVGAKNIIVRWAHS- 112
Query: 65 YLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
+ ++ + K + +++R I AI+ KLK ++E
Sbjct: 113 -VTESDMDKPKPKIDIPALAGAKKEDKRISRETAIQAIEAKLKLMKE 158
>gi|340718607|ref|XP_003397756.1| PREDICTED: probable RNA-binding protein 18-like [Bombus terrestris]
Length = 196
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64
+G I D L+H GP+ G PRG+AF+ Y T ++AK AK+ +H + ++VR A
Sbjct: 38 HGTIEKFDLLFHRSGPQAGQPRGYAFVTYKTIQDAKTAKDALHNLKVGSKNIIVRWAHS- 96
Query: 65 YLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQKQADN 124
+ ++ + K + +++R I AI+ KLK + E K++ N
Sbjct: 97 -VTESDMDKPKPKIDIPALAGAKKEDKRISRETAIQAIEAKLKLMRES-----KEEFELN 150
Query: 125 SSCNGS 130
NGS
Sbjct: 151 KPLNGS 156
>gi|328853895|gb|EGG03031.1| hypothetical protein MELLADRAFT_38340 [Melampsora larici-populina
98AG31]
Length = 148
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +GKI DFL+H G RG PRG+AFIE S K+EA A +++ + G+ ++V
Sbjct: 31 LFSKFGKISKLDFLFHKSGILRGKPRGYAFIEMSRKDEALKAMVELNNKPLRGKRILVTP 90
Query: 61 ASE 63
A+E
Sbjct: 91 ANE 93
>gi|242007509|ref|XP_002424582.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212508025|gb|EEB11844.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 187
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64
+G I D L+H GP G PRG+AF+ Y E A+ A++K+ G+ + L V+ A
Sbjct: 46 HGAIEKFDLLFHRSGPLEGQPRGYAFVTYVQTEFAESAQKKLDGKYLGSKKLSVKWACTL 105
Query: 65 YLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSS 115
E + + G + ++++++ I AI+ KLK +EE SSS
Sbjct: 106 TKEPVIEKQKPILNIPALAG--TKDTKKVSKTSTIQAIEAKLKTMEEASSS 154
>gi|307210105|gb|EFN86802.1| Probable RNA-binding protein 18 [Harpegnathos saltator]
Length = 211
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64
YG I D L+H GP+ G PRG+AF+ Y T +AK AK +H + ++VR A
Sbjct: 54 YGTIEKFDLLFHRSGPQAGQPRGYAFVTYKTIPDAKTAKAALHNLKVGAKNIIVRWAHS- 112
Query: 65 YLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
+ ++ + K + +++R I AI+ KLK + E
Sbjct: 113 -VSESEMDKPKPKIDIPALAGAKKEDKKISRETAIQAIEAKLKLMRE 158
>gi|350409810|ref|XP_003488851.1| PREDICTED: probable RNA-binding protein 18-like [Bombus impatiens]
Length = 203
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64
+G I D L+H GP+ G PRG+AF+ Y T ++AK AK+ +H + ++VR A
Sbjct: 45 HGTIEKFDLLFHRSGPQAGQPRGYAFVTYKTIQDAKTAKDALHNLKVGSKNIIVRWAHS- 103
Query: 65 YLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
+ ++ + K + +++R I AI+ KLK ++E
Sbjct: 104 -VTESDMDKPKPKIDIPALAGAKKEDKRISRETAIQAIEAKLKLMKE 149
>gi|328781298|ref|XP_001121805.2| PREDICTED: probable RNA-binding protein 18-like [Apis mellifera]
Length = 203
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64
+G I D L+H GP+ G PRG+AF+ Y T ++AK AK+ +H + ++VR A
Sbjct: 45 HGTIEKFDLLFHRSGPQAGQPRGYAFVTYKTIQDAKAAKDALHNLKVGAKNIIVRWAHS- 103
Query: 65 YLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
+ ++ + K + +++R I AI+ KLK ++E
Sbjct: 104 -VTESDMDKPKPKIDIPALAGAKKEDKRISRETAIQAIEAKLKLMKE 149
>gi|332020823|gb|EGI61221.1| Putative RNA-binding protein 18 [Acromyrmex echinatior]
Length = 212
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64
YG I D L+H GP+ G PRG+AF+ Y T ++A AK+ +H + ++VR A
Sbjct: 54 YGTIEKFDLLFHRSGPQAGQPRGYAFVTYKTIQDAIRAKDALHNLKVGAKNIIVRWAHS- 112
Query: 65 YLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
+ + + K E +++R I AI+ KLK ++E
Sbjct: 113 -VTELDMDKPKPKIEIPALAGAKKEDKKISRETAIQAIEAKLKLMKE 158
>gi|241745444|ref|XP_002414263.1| conserved hypothetical protein [Ixodes scapularis]
gi|215508117|gb|EEC17571.1| conserved hypothetical protein [Ixodes scapularis]
Length = 212
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVR 59
YG + DFL+H GP +G PRG+ F+ Y TK +A+ A + +HG+L + LV +
Sbjct: 17 YGNVKKFDFLFHKAGPLKGHPRGYCFVTYETKPQAEHALQCLHGKLMLSKTLVAK 71
>gi|307187764|gb|EFN72736.1| Probable RNA-binding protein 18 [Camponotus floridanus]
Length = 212
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
YG I D L+H GP+ G PRG+AF+ Y T ++AK AK+ +H + ++VR A
Sbjct: 54 YGTIEKFDLLFHRSGPQAGQPRGYAFVTYKTIQDAKTAKDALHNLKVGAKNIIVRWA 110
>gi|383858706|ref|XP_003704840.1| PREDICTED: probable RNA-binding protein 18-like [Megachile
rotundata]
Length = 203
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64
+G I D L+H GP+ G PRG+AF+ Y T ++A+ AK+ +H + ++VR A
Sbjct: 45 HGTIEKFDLLFHRSGPQAGQPRGYAFVTYKTIQDARAAKDALHNLKVGAKNIIVRWAHS- 103
Query: 65 YLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
+ ++ + K + +++R I AI+ KLK ++E
Sbjct: 104 -VTESDMDKPKPKIDIPALAGAKKEDKRISRETAIQAIEAKLKLMKE 149
>gi|443728824|gb|ELU15003.1| hypothetical protein CAPTEDRAFT_148559 [Capitella teleta]
Length = 195
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64
+G + DFL+H GP +G PRG+ F Y KE+A A + +HG++A + LV + A +
Sbjct: 51 HGNLKHFDFLYHRSGPDQGKPRGYCFATYENKEDAMKAIKGIHGKMALSKKLVAKQAKPQ 110
Query: 65 YLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKAL 109
V + N T + S I AI+ KL+ L
Sbjct: 111 ------------VDDINNDAKNERTMSPASTSTMIKAIEEKLQKL 143
>gi|156398074|ref|XP_001638014.1| predicted protein [Nematostella vectensis]
gi|156225131|gb|EDO45951.1| predicted protein [Nematostella vectensis]
Length = 194
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+ +G+I FL+H GP RG PRG+ F+E+ KE+A+ A ++ ++ R LVV
Sbjct: 42 ILQQFGEIEHFQFLFHGNGPNRGEPRGYCFVEFKKKEDARKALRGLNKKIVLSRALVVDW 101
Query: 61 A-SEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKAL 109
A K D Q S N ++ + +KI AI+ KL+ +
Sbjct: 102 AHHHKSSADEPQKSK----HTNIVPNAQTSTHSPSNESKIKAIEAKLRVM 147
>gi|114052060|ref|NP_001040210.1| RNA binding motif protein 18 [Bombyx mori]
gi|87248397|gb|ABD36251.1| RNA binding motif protein 18 [Bombyx mori]
Length = 193
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGR-LACGRPLVVRLASE 63
YG I D L+H GP G PRGFAF+ Y K++A A ++G+ L C R V
Sbjct: 43 YGNIEKFDMLFHRSGPAAGQPRGFAFVTYKLKQDAVKAMNSLNGQLLGCKRICV------ 96
Query: 64 KYLEDAAQNSSKAVGEANKTGFVGG-TSGQMNRSAKIAAIKNKLKALE 110
K+ + A + K E G ++++ I +I+ KLK +E
Sbjct: 97 KFAKHTADDQDKPKPELGIPALAGAKPEFKLSKKTAIQSIEAKLKMME 144
>gi|385305672|gb|EIF49630.1| polyadenylate-binding protein [Dekkera bruxellensis AWRI1499]
Length = 655
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+PYGKI S + + G RG F F+ Y+ EEA A +MH R+ G+PL V LA
Sbjct: 365 FAPYGKITSAKVMTNDAGKSRG----FGFVCYTKPEEATRAINEMHQRMVMGKPLYVALA 420
Query: 62 SEK 64
K
Sbjct: 421 QRK 423
>gi|270004407|gb|EFA00855.1| hypothetical protein TcasGA2_TC003758 [Tribolium castaneum]
Length = 196
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+ +G I D L+H GP G PRG+AF+ Y +E+A AK+ ++ L R +VV
Sbjct: 32 LVQKHGAIEKFDLLFHRTGPLAGQPRGYAFVTYVNQEDAVQAKQVLNNVLVGQRKIVVTW 91
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGF-VGGTSGQMNRSAKIAAIKNKLKALEEES 113
A E+ K E N + + +R ++I AI+ KLK +E+++
Sbjct: 92 AHSVNNEEV----EKPKPEINIPALAMSKNEKKTDRESQIQAIEAKLKLMEKKA 141
>gi|414867507|tpg|DAA46064.1| TPA: hypothetical protein ZEAMMB73_056022 [Zea mays]
Length = 91
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 46 MHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNK 105
M+G+L CGRP+VV LASE+ + +S +AV + G G S + +AKIAAIKNK
Sbjct: 1 MNGKLICGRPMVVHLASERS-SLGSSSSHRAVKDKKLAGGSGAKSQYTDTAAKIAAIKNK 59
Query: 106 LKALEEESSSAKKQK 120
LK+LE+ S KK +
Sbjct: 60 LKSLEDGGCSTKKPR 74
>gi|67611128|ref|XP_667137.1| RNA binding protein [Cryptosporidium hominis TU502]
gi|54658240|gb|EAL36907.1| RNA binding protein [Cryptosporidium hominis]
Length = 903
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA---CGRPLV 57
+FSPYG+I +E F+ R P GV +G AF++Y+ KE+ A + +HG L RP+
Sbjct: 424 LFSPYGQI-NEIFIM--REPHSGVGKGCAFVKYAFKEQGLFAIKSLHGALTLADVNRPIE 480
Query: 58 VRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMN 94
VR AS+ + + SS + + F GT+ +N
Sbjct: 481 VRFASKNH---QSSTSSSLIAQGAHLTF--GTAAALN 512
>gi|432886250|ref|XP_004074875.1| PREDICTED: probable RNA-binding protein 18-like [Oryzias latipes]
Length = 231
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 35/142 (24%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKE--------------------------- 37
+G++ DFL+H GP G PRG+ F+ +ST+E
Sbjct: 46 FGQVKQFDFLFHKSGPLEGQPRGYCFVNFSTRETGRRRASDQTSSSPLTVTVLRAVSIVR 105
Query: 38 --EAKLAKEKMHGRLACGRPLVVRLAS------EKYLEDAAQNSSKAVGEANKTGFVGGT 89
EA+ A + ++G+LA + LVVR A E + D SS + T T
Sbjct: 106 KPEAERAIQCLNGKLALSKKLVVRWAHAQVRKFEGFRNDKTMPSSLEPSSSGSTEAGSIT 165
Query: 90 SGQMNRSAKIAAIKNKLKALEE 111
+ ++ SAKI AI+ KL+ +E+
Sbjct: 166 TNYLSTSAKIRAIEAKLQMMEQ 187
>gi|322783663|gb|EFZ11001.1| hypothetical protein SINV_03917 [Solenopsis invicta]
Length = 145
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+ YG I D L+H GP+ G PRG+AF+ Y+ ++A+ AK+ +H + ++VR
Sbjct: 61 LVQKYGTIEKFDLLFHRSGPQAGQPRGYAFVTYTAIQDARRAKDALHNLKVGAKNIIVRW 120
Query: 61 ASEKYLEDAAQNSSKAVG 78
A + + +N K +G
Sbjct: 121 AHS--VTELFKNERKKLG 136
>gi|225713126|gb|ACO12409.1| Sex-lethal homolog [Lepeophtheirus salmonis]
gi|290561258|gb|ADD38031.1| Sex-lethal homolog [Lepeophtheirus salmonis]
Length = 255
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 5/65 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
MFS YGKIV+ + L + P G P+G AF+ YS + EAK A ++G + G +P++V
Sbjct: 135 MFSTYGKIVTLNLL---KDPITGKPKGVAFVRYSKQSEAKDAITALNGTMMTGNDKPMLV 191
Query: 59 RLASE 63
++A E
Sbjct: 192 KVAEE 196
>gi|59802519|gb|AAX07503.1| unknown [Gemmata sp. Wa1-1]
Length = 122
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF+PYG +VS + G +GF F+E T +EA+ A MHG++ GRPL V
Sbjct: 59 MFTPYGSVVSAQVIMDR---DTGRSKGFGFVEMGTDQEAQAAITGMHGQVIEGRPLTVNE 115
Query: 61 ASEKYL 66
A K L
Sbjct: 116 ARPKKL 121
>gi|403414352|emb|CCM01052.1| predicted protein [Fibroporia radiculosa]
Length = 322
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEA---KLAKEKMHGRLACGRPLV 57
+F+ +GK+ DFL+H GP RG PRG+AF+E+S + + A H C P
Sbjct: 75 VFTKFGKVSKLDFLFHKSGPMRGKPRGYAFVEFSDPDVSWFHPPAPAVAHPGFLCMTPTT 134
Query: 58 VRLASEKYLEDAAQNSSKAVGEAN 81
+R + D ++ +A+ N
Sbjct: 135 MRPPNIAPSSDPGMDAKRALVTVN 158
>gi|126649123|ref|XP_001388078.1| RNA binding protein [Cryptosporidium parvum Iowa II]
gi|126117166|gb|EAZ51266.1| RNA binding protein, putative [Cryptosporidium parvum Iowa II]
Length = 906
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 11/97 (11%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA---CGRPLV 57
+FSPYG+I +E F+ R P GV +G AF++Y+ KE+ A + +HG L RP+
Sbjct: 425 LFSPYGQI-NEIFIM--REPHSGVGKGCAFVKYAFKEQGLFAIKSLHGALTLADVNRPIE 481
Query: 58 VRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMN 94
VR AS+ + + SS + + F GT +N
Sbjct: 482 VRFASKNH---QSSTSSSLIAQGAHLTF--GTPAALN 513
>gi|405974708|gb|EKC39333.1| Putative RNA-binding protein 18 [Crassostrea gigas]
Length = 262
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64
+G + DFL+H GP +G RG+ F Y K A+ A KM+G+LA + L+V+ A+ K
Sbjct: 84 FGSLKKFDFLYHKSGPDQGKSRGYCFASYDNKACAEHAMAKMNGKLALSKRLIVKWAN-K 142
Query: 65 YLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSS 115
+ + + N+ ++ +KI AI+ KL+ +++ + S
Sbjct: 143 DVSTEQEKPKMTINTGNR-----AEEEDISPQSKIQAIEAKLQKMQDRNPS 188
>gi|452820290|gb|EME27334.1| RNA-binding protein [Galdieria sulphuraria]
Length = 596
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+++S L + P+ G RGF F++Y E+AK A E+++G GRPL V L
Sbjct: 325 IFEPFGEVIS---LQLHKDPETGRSRGFGFVQYKNHEDAKKAFEQLNGLDLAGRPLKVGL 381
Query: 61 AS 62
A+
Sbjct: 382 AT 383
>gi|432102707|gb|ELK30188.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 650
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F+P+G + S + +G +R +GF F+ +S++EEAK A E+MHG++ RPL V
Sbjct: 321 IFAPFGTVTSAKVI--VKGGRR---KGFGFVSFSSREEAKKAVEEMHGKMLSARPLYVSY 375
Query: 61 ASEK 64
A K
Sbjct: 376 ARYK 379
>gi|432112328|gb|ELK35127.1| Putative RNA-binding protein 18 [Myotis davidii]
Length = 147
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+ +G + DFL+H G PRG+ F+ + TK+EA+ A + ++G+L + LVVR
Sbjct: 44 LLQKFGMVKQFDFLFHKSDTLEGQPRGYCFVNFETKQEAEQAIQCLNGKLVLSKKLVVRW 103
Query: 61 A 61
A
Sbjct: 104 A 104
>gi|198470946|ref|XP_002133619.1| GA22715 [Drosophila pseudoobscura pseudoobscura]
gi|198145693|gb|EDY72246.1| GA22715 [Drosophila pseudoobscura pseudoobscura]
Length = 672
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGR--LACGRPLVVR 59
FSP+G+IV + L R G PRG AF+ +S +EEA+ A ++ L C +P+ VR
Sbjct: 226 FSPFGQIVQRNIL---RDKLTGRPRGVAFVRFSKREEAQDALNTLNNTVPLGCTQPIWVR 282
Query: 60 LASEKYLEDAAQNSSK 75
LA E AAQ S+
Sbjct: 283 LAEEHGKAKAAQFMSQ 298
>gi|78191396|gb|ABB29919.1| unknown [Solanum tuberosum]
Length = 258
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V ++ R + G RGFAF+ Y ++EA+ A EK+ GR+ GR ++VR
Sbjct: 35 LFDKYGKVVD---VFIPRDRRTGDSRGFAFVRYKYQDEAQKAVEKLDGRVVDGREIMVRF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|339237675|ref|XP_003380392.1| RNA-binding protein 39 [Trichinella spiralis]
gi|316976770|gb|EFV59992.1| RNA-binding protein 39 [Trichinella spiralis]
Length = 680
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI S L + P+ RG+ FI + E+AK A E+++G GRP+ V
Sbjct: 346 IFEPFGKIESIQLL---KDPETSRSRGYGFITFYNSEDAKRAMEQLNGFELAGRPMKVGH 402
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
+E ++ S E +++G GT+G++ AK+A
Sbjct: 403 VTEH--QNTLFQPSLDSDELDRSGIDLGTTGRLQLMAKLA 440
>gi|332029988|gb|EGI69813.1| Sex-lethal-like protein [Acromyrmex echinatior]
Length = 365
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+FS YG IV ++ L R G+PRG AF+ + +EEA+ A ++HG + G PL V
Sbjct: 200 LFSKYGNIVQKNIL---RDKLTGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSV 256
Query: 59 RLASE 63
++A E
Sbjct: 257 KIAEE 261
>gi|224012523|ref|XP_002294914.1| polyadenlyte binding protein [Thalassiosira pseudonana CCMP1335]
gi|220969353|gb|EED87694.1| polyadenlyte binding protein [Thalassiosira pseudonana CCMP1335]
Length = 612
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS G I S + + K G+ RGF F+ YST E+A A +M+G++ G+P+ V LA
Sbjct: 315 FSAMGTITSARVM---KDLKTGISRGFGFVCYSTPEDATRAVNEMNGKIILGKPIFVALA 371
Query: 62 SEKYLEDAAQNSSKAVGEANKTGFVGG 88
+ + A + G N G +GG
Sbjct: 372 QRRDVRRAQLEAQHNQGRGNLPGPMGG 398
>gi|425770690|gb|EKV09156.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum Pd1]
gi|425772037|gb|EKV10463.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum PHI26]
Length = 556
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ +F+ + + G +G+AF++++ E+A+ A EKM+G GR + V L
Sbjct: 284 VFEPFGEL---EFV-QLQKDETGRSKGYAFVQFANPEQARDALEKMNGFELAGRAIRVGL 339
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGT-SGQMNRSAKIAAIKNKLKALEEESSSAKKQ 119
++K+ DA N N++ F G + SGQ R + N +A E+
Sbjct: 340 GNDKFTPDAHANRPSGASSTNQSNFQGSSFSGQGGRGVQAGGSNNFDRAGGRETEKGAGA 399
Query: 120 KQADNSSCNG 129
D++ G
Sbjct: 400 SALDDTDVAG 409
>gi|452001712|gb|EMD94171.1| hypothetical protein COCHEDRAFT_1020240 [Cochliobolus
heterostrophus C5]
Length = 325
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +G I S ++ RG+ RGFA++EY +A+ A + + ++ GR LVV+
Sbjct: 155 VFSRFGDIESVRMVYD----NRGLSRGFAYVEYKNVSDAQAAIDNLDMQVFEGRNLVVQY 210
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQM 93
S KY A++ + KT F+G S +M
Sbjct: 211 HSPKYQTTKARSPNGEPNPPTKTLFIGNMSFEM 243
>gi|334183839|ref|NP_177322.2| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|334183841|ref|NP_001185373.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|322510110|sp|Q05196.3|PABP5_ARATH RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|332197109|gb|AEE35230.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|332197110|gb|AEE35231.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
Length = 682
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MFS YG + S + +++G + RGF F+ YS EEA LA ++M+G++ +PL V L
Sbjct: 361 MFSEYGNVTSCKVMMNSQG----LSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVAL 416
Query: 61 ASEK 64
A K
Sbjct: 417 AQRK 420
>gi|7239504|gb|AAF43230.1|AC012654_14 Identical to the polyadenylate-binding protein 5 (PAB5) from
Arabidopsis thaliana gb|M97657 [Arabidopsis thaliana]
Length = 668
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MFS YG + S + +++G + RGF F+ YS EEA LA ++M+G++ +PL V L
Sbjct: 347 MFSEYGNVTSCKVMMNSQG----LSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVAL 402
Query: 61 ASEK 64
A K
Sbjct: 403 AQRK 406
>gi|261327112|emb|CBH10088.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 426
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FSPYG+I+S + R G G AF+ ++T E+A+ A HGR+ CGR L V+
Sbjct: 106 IFSPYGEILSAAVM---RNIHTGDSLGTAFVRFATTEQARAALVGCHGRVVCGRVLSVQW 162
Query: 61 ASEKYLEDAAQNSSKAVGEANK 82
A Q+ VGEA K
Sbjct: 163 AKR-------QHDGTPVGEARK 177
>gi|166786|gb|AAA32832.1| poly(A)-binding protein [Arabidopsis thaliana]
Length = 668
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MFS YG + S + +++G + RGF F+ YS EEA LA ++M+G++ +PL V L
Sbjct: 347 MFSEYGNVTSCKVMMNSQG----LSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVAL 402
Query: 61 ASEK 64
A K
Sbjct: 403 AQRK 406
>gi|72387121|ref|XP_843985.1| RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175981|gb|AAX70104.1| RNA-binding protein, putative [Trypanosoma brucei]
gi|70800517|gb|AAZ10426.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 386
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FSPYG+I+S + R G G AF+ ++T E+A+ A HGR+ CGR L V+
Sbjct: 66 IFSPYGEILSAAVM---RNIHTGDSLGTAFVRFATTEQARAALVGCHGRVVCGRVLSVQW 122
Query: 61 ASEKYLEDAAQNSSKAVGEANK 82
A Q+ VGEA K
Sbjct: 123 AKR-------QHDGTPVGEARK 137
>gi|320581683|gb|EFW95902.1| Poly(A) binding protein [Ogataea parapolymorpha DL-1]
Length = 629
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F PYG I S + G +G F F+ YS+ EEA A +MH R+ G+PL V LA
Sbjct: 351 FKPYGTITSAKVMLDDAGKSKG----FGFVCYSSPEEATKAITEMHQRMVAGKPLYVALA 406
Query: 62 SEK 64
K
Sbjct: 407 QRK 409
>gi|15228191|ref|NP_188259.1| poly(A) binding protein 6 [Arabidopsis thaliana]
gi|2062166|gb|AAB63640.1| poly(A)-binding protein isolog [Arabidopsis thaliana]
gi|9279720|dbj|BAB01277.1| poly(A) binding protein-like [Arabidopsis thaliana]
gi|332642284|gb|AEE75805.1| poly(A) binding protein 6 [Arabidopsis thaliana]
Length = 537
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YG+IVS + H + G +GF F+ +S EE+K AK ++G L G+P+VVR+
Sbjct: 323 IFGCYGQIVSAKVMCH----ENGRSKGFGFVCFSNCEESKQAKRYLNGFLVDGKPIVVRV 378
Query: 61 ASEK 64
A K
Sbjct: 379 AERK 382
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
MF P+G I+S + + G +GF F+++ T++ A A+ +HG + G+ L V
Sbjct: 131 MFCPFGSILSCKVV-----EENGQSKGFGFVQFDTEQSAVSARSALHGSMVYGKKLFV 183
>gi|195399021|ref|XP_002058119.1| GJ15667 [Drosophila virilis]
gi|194150543|gb|EDW66227.1| GJ15667 [Drosophila virilis]
Length = 428
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+FSPYG IV + L R G PRG AF+ Y+ +EEA+ A + ++ + G +P+ V
Sbjct: 122 IFSPYGLIVQRNIL---RDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWV 178
Query: 59 RLASEKYLEDAAQNSSKAVG 78
RLA E AAQ S+ G
Sbjct: 179 RLAEEHGKAKAAQFMSQIAG 198
>gi|195162221|ref|XP_002021954.1| GL14245 [Drosophila persimilis]
gi|194103852|gb|EDW25895.1| GL14245 [Drosophila persimilis]
Length = 618
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGR--LACGRPLVVR 59
FSP+G+IV + L R G PRG AF+ +S +EEA+ A ++ L C +P+ VR
Sbjct: 226 FSPFGQIVQRNIL---RDKLTGRPRGVAFVRFSKREEAQDALNTLNNTVPLGCTQPIWVR 282
Query: 60 LASEKYLEDAAQNSSK 75
LA E AAQ S+
Sbjct: 283 LAEEHGKAKAAQFMSQ 298
>gi|261327115|emb|CBH10091.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 377
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FSPYG+I+S + R G G AF+ ++T E+A+ A HGR+ CGR L V+
Sbjct: 44 IFSPYGEILSAAVM---RNIHTGDSLGTAFVRFATTEQARAALVGCHGRVVCGRVLSVQW 100
Query: 61 ASEKYLEDAAQNSSKAVGEANK 82
A Q+ VGEA K
Sbjct: 101 AKR-------QHDGTPVGEARK 115
>gi|167517425|ref|XP_001743053.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778152|gb|EDQ91767.1| predicted protein [Monosiga brevicollis MX1]
Length = 1117
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 10/85 (11%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKR---GVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLV 57
+FSP+G IVS R P++ G RGFAFIE+STK+EA+ A + G GR L
Sbjct: 1024 LFSPHGNIVS------VRLPRKQYDGTHRGFAFIEFSTKQEARDAFSALSGTHLYGRRLA 1077
Query: 58 VRLA-SEKYLEDAAQNSSKAVGEAN 81
+ A ++ LE Q + +++ +++
Sbjct: 1078 MEFAEDDESLETLRQKTQRSMHQSD 1102
>gi|301624539|ref|XP_002941556.1| PREDICTED: RNA-binding protein 39 [Xenopus (Silurana) tropicalis]
Length = 420
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI + L + P G +GF FI ++ E A+ A E+++G GRP+ V
Sbjct: 266 IFEPFGKIENIQLL---KEPDTGRSKGFGFITFTDAECARRALEQLNGFELAGRPMKVGH 322
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
++ +LE + S E +TG G +G++ AK+A
Sbjct: 323 VTD-HLEGGGEASFLDSDELERTGIDLGATGRLQLMAKLA 361
>gi|72387127|ref|XP_843988.1| RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175978|gb|AAX70101.1| RNA-binding protein, putative [Trypanosoma brucei]
gi|70800520|gb|AAZ10429.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 377
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FSPYG+I+S + R G G AF+ ++T E+A+ A HGR+ CGR L V+
Sbjct: 44 IFSPYGEILSAAVM---RNIHTGDSLGTAFVRFATTEQARAALVGCHGRVVCGRVLSVQW 100
Query: 61 ASEKYLEDAAQNSSKAVGEANK 82
A Q+ VGEA K
Sbjct: 101 AKR-------QHDGTPVGEARK 115
>gi|410931199|ref|XP_003978983.1| PREDICTED: RNA binding protein fox-1 homolog 2-like [Takifugu
rubripes]
Length = 352
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + T +A+ AKEK+HG L GR + V
Sbjct: 160 MFGQFGKILDVEIIFNERGSK-----GFGFVTFETSADAERAKEKLHGTLVEGRKIEVNN 214
Query: 61 ASEKYLEDAAQNSSKAVGE 79
A+ + + + + A GE
Sbjct: 215 ATARVMTNKKMTTPYANGE 233
>gi|358342556|dbj|GAA49996.1| RNA-binding protein 39 [Clonorchis sinensis]
Length = 730
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI D + + P G +G+ F+ Y+ ++AK A ++++G GRP+ V
Sbjct: 197 IFEPFGKI---DDIKLIKDPATGRSQGYGFVTYANSDDAKKALDQLNGFELAGRPMKVNH 253
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ + A S+ +A++ G GT+G++ AK+A
Sbjct: 254 VTER--GEYAALSALDNDDADRAGVDLGTTGRLALMAKLA 291
>gi|168704267|ref|ZP_02736544.1| RNA-binding region RNP-1 [Gemmata obscuriglobus UQM 2246]
Length = 137
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF+PYG +VS + G +GF F+E + +EA+ A MHG++ GRPL V
Sbjct: 22 MFTPYGAVVSAQVIMDR---DTGRSKGFGFVEMGSDQEAQAAISGMHGQVIEGRPLTVNE 78
Query: 61 ASEK 64
A K
Sbjct: 79 ARPK 82
>gi|118792383|ref|XP_320292.3| AGAP012250-PA [Anopheles gambiae str. PEST]
gi|116116874|gb|EAA00555.3| AGAP012250-PA [Anopheles gambiae str. PEST]
Length = 209
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G IV + G+PRG+AFIEYS + EA A E+MHG G+ ++V
Sbjct: 81 FAPFGTIVHARLVTDI---VTGLPRGYAFIEYSARGEALRAIERMHGVTIDGKEILVDEE 137
Query: 62 SEKYLE 67
E+ LE
Sbjct: 138 WERRLE 143
>gi|328783793|ref|XP_003250344.1| PREDICTED: sex-lethal homolog [Apis mellifera]
Length = 346
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+FS YG IV ++ L + G+PRG AF+ + +EEA+ A ++HG + G PL V
Sbjct: 190 IFSKYGNIVQKNIL---KDKLTGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSV 246
Query: 59 RLASE 63
++A E
Sbjct: 247 KIAEE 251
>gi|443895761|dbj|GAC73106.1| polyadenylate-binding protein [Pseudozyma antarctica T-34]
Length = 556
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + R P GV RGF F+ YS EEA A +M+G++ RPL V LA
Sbjct: 349 FAPFGAITSCKIM---RAPS-GVSRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYVALA 404
Query: 62 SEK 64
K
Sbjct: 405 QRK 407
>gi|345479148|ref|XP_003423887.1| PREDICTED: sex-lethal homolog isoform 3 [Nasonia vitripennis]
Length = 376
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+FS +G+IV ++ L + G+PRG AF+ Y +EEA+ A ++HG + G PL V
Sbjct: 187 IFSKFGQIVQKNIL---KDKLTGLPRGVAFVRYDKREEAQDAINQLHGTIPEGGSEPLSV 243
Query: 59 RLASE 63
++A E
Sbjct: 244 KIAEE 248
>gi|393247915|gb|EJD55422.1| splicing factor, CC1-like protein [Auricularia delicata TFB-10046
SS5]
Length = 581
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ DF+ R P G +G+AF++Y E+AK+A E+M G GR L V
Sbjct: 373 VFEPFGEL---DFVDLHRDPGTGRSKGYAFVQYKRAEDAKMALEQMDGFELAGRTLRVNS 429
Query: 61 ASEK 64
+EK
Sbjct: 430 VNEK 433
>gi|170284570|gb|AAI61141.1| rbm23 protein [Xenopus (Silurana) tropicalis]
Length = 272
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI + L + P G +GF FI ++ E A+ A E+++G GRP+ V
Sbjct: 118 IFEPFGKIENIQLL---KEPDTGRSKGFGFITFTDAECARRALEQLNGFELAGRPMKVGH 174
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
++ +LE + S E +TG G +G++ AK+A
Sbjct: 175 VTD-HLEGGGEASFLDSDELERTGIDLGATGRLQLMAKLA 213
>gi|345479144|ref|XP_003423885.1| PREDICTED: sex-lethal homolog isoform 1 [Nasonia vitripennis]
Length = 277
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+FS +G+IV ++ L + G+PRG AF+ Y +EEA+ A ++HG + G PL V
Sbjct: 143 IFSKFGQIVQKNIL---KDKLTGLPRGVAFVRYDKREEAQDAINQLHGTIPEGGSEPLSV 199
Query: 59 RLASE 63
++A E
Sbjct: 200 KIAEE 204
>gi|410899897|ref|XP_003963433.1| PREDICTED: embryonic polyadenylate-binding protein-like [Takifugu
rubripes]
Length = 606
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+PYG I S + T GP+ RGF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FAPYGTITSAKVM--TDGPQS---RGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
+
Sbjct: 369 QRR 371
>gi|187097098|ref|NP_001119609.1| sex-lethal [Acyrthosiphon pisum]
gi|98986311|tpe|CAJ55783.1| TPA: sex-lethal [Acyrthosiphon pisum]
gi|239792967|dbj|BAH72757.1| ACYPI000005 [Acyrthosiphon pisum]
Length = 205
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRL--ACGRPLVV 58
+F+PYG+IV ++ L + G+PRG AF+ Y+ KE+A+ A +++G L C L V
Sbjct: 114 LFAPYGQIVQKNIL---KDKYSGLPRGVAFVRYNKKEDAQKAIIQLNGVLLEGCTEHLSV 170
Query: 59 RLASEKYLEDAAQNSSKAVGEANK 82
++A E + AA + G A++
Sbjct: 171 KIAEEHGKQKAAYLAGLQTGLAHR 194
>gi|414887662|tpg|DAA63676.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 207
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YG+IV ++ R + G RGFAF+ Y ++EA+ A E++ GRL GR ++V+
Sbjct: 36 LFDKYGEIVD---IYIPRDRRTGDSRGFAFVRYKYEDEAQKAVERLDGRLVDGREIMVQF 92
Query: 61 ASEKYLEDAAQ-NSSKAVGEANKTG 84
A KY +A + N + V + G
Sbjct: 93 A--KYGPNAERINKGRIVEPVPRPG 115
>gi|297797433|ref|XP_002866601.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
gi|297312436|gb|EFH42860.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F+ YGK+V ++ R + G RGFAF+ Y K+EA A E++ GR+ GR + V+
Sbjct: 35 LFAKYGKVVD---VFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERLDGRVVDGREITVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|228480217|ref|NP_001153184.1| CUGBP Elav-like family member 2 isoform 1 [Pongo abelii]
gi|55733625|emb|CAH93489.1| hypothetical protein [Pongo abelii]
Length = 514
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA---CGRPLV 57
MFSP+G+I + W RGP G+ RG AF+ +ST+ A+ A + MH C P+V
Sbjct: 151 MFSPFGQI---EECWILRGPD-GLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIV 206
Query: 58 VRLASEK 64
V+ A +
Sbjct: 207 VKFADTQ 213
>gi|350411267|ref|XP_003489292.1| PREDICTED: protein sex-lethal-like [Bombus impatiens]
Length = 356
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+FS YG IV ++ L + G+PRG AF+ + +EEA+ A ++HG + G PL V
Sbjct: 190 IFSKYGNIVQKNIL---KDKLTGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSV 246
Query: 59 RLASEKYLEDAA 70
++A E + AA
Sbjct: 247 KIAEEHGKQKAA 258
>gi|340729596|ref|XP_003403084.1| PREDICTED: protein sex-lethal-like [Bombus terrestris]
Length = 356
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+FS YG IV ++ L + G+PRG AF+ + +EEA+ A ++HG + G PL V
Sbjct: 190 IFSKYGNIVQKNIL---KDKLTGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSV 246
Query: 59 RLASEKYLEDAA 70
++A E + AA
Sbjct: 247 KIAEEHGKQKAA 258
>gi|47211119|emb|CAF95305.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + T +A+ AKEK+HG L GR + V
Sbjct: 28 MFGQFGKILDVEIIFNERGSK-----GFGFVTFETSADAERAKEKLHGTLVEGRKIEVNN 82
Query: 61 ASEKYLEDAAQNSSKAVGEANKT 83
A+ + + + + A GE T
Sbjct: 83 ATARVMTNKKMTTPYANGEGLAT 105
>gi|428161292|gb|EKX30760.1| hypothetical protein GUITHDRAFT_123023 [Guillardia theta CCMP2712]
Length = 209
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G IV + R P+ G +GFAF+ Y E A +A E M+G+ CGRP+ V+ A
Sbjct: 123 FSAFGVIVG-NTPKCMRDPETGQSKGFAFVNYDCFEAADMAIEAMNGQYLCGRPISVQYA 181
Query: 62 SEK 64
+K
Sbjct: 182 YKK 184
>gi|302843097|ref|XP_002953091.1| hypothetical protein VOLCADRAFT_63158 [Volvox carteri f.
nagariensis]
gi|300261802|gb|EFJ46013.1| hypothetical protein VOLCADRAFT_63158 [Volvox carteri f.
nagariensis]
Length = 762
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKR--GVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
+F+P+G + S R PK+ G RGFAF+E+ TK+EAK A E + G GR LVV
Sbjct: 671 LFNPFGHLKS------CRLPKKFDGSHRGFAFVEFVTKQEAKNALEGLAGTHLYGRRLVV 724
Query: 59 RLASEKYLEDAAQNSSKA 76
A E D +N + A
Sbjct: 725 EYAREDDTLDDIRNKTAA 742
>gi|400234898|gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
Length = 643
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FSPYG I S + R P GV +G F+ +ST EEA A +M+G++ +PL V L
Sbjct: 328 LFSPYGTITSCKVM---RDPS-GVSKGSGFVAFSTPEEASRALSEMNGKMVVSKPLYVAL 383
Query: 61 ASEK 64
A K
Sbjct: 384 AQRK 387
>gi|345479146|ref|XP_003423886.1| PREDICTED: sex-lethal homolog isoform 2 [Nasonia vitripennis]
Length = 393
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+FS +G+IV ++ L + G+PRG AF+ Y +EEA+ A ++HG + G PL V
Sbjct: 204 IFSKFGQIVQKNIL---KDKLTGLPRGVAFVRYDKREEAQDAINQLHGTIPEGGSEPLSV 260
Query: 59 RLASE 63
++A E
Sbjct: 261 KIAEE 265
>gi|388854914|emb|CCF51417.1| probable PAB1-mRNA polyadenylate-binding protein [Ustilago hordei]
Length = 648
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + R P GV RGF F+ YS EEA A +M+G++ RPL V LA
Sbjct: 348 FAPFGTITSCKIM---RAPS-GVSRGFGFVCYSVPEEANKAVSEMNGKMLDNRPLYVALA 403
Query: 62 SEK 64
K
Sbjct: 404 QRK 406
>gi|319411853|emb|CBQ73896.1| probable PAB1-mRNA polyadenylate-binding protein [Sporisorium
reilianum SRZ2]
Length = 650
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + R P GV RGF F+ YS EEA A +M+G++ RPL V LA
Sbjct: 350 FAPFGAITSCKIM---RAPS-GVSRGFGFVCYSVPEEANKAVSEMNGKMLDNRPLYVALA 405
Query: 62 SEK 64
K
Sbjct: 406 QRK 408
>gi|307199187|gb|EFN79874.1| Protein sex-lethal [Harpegnathos saltator]
Length = 217
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+FS YG IV ++ L + G+PRG AF+ + +EEA+ A ++HG + G PL V
Sbjct: 134 IFSKYGNIVQKNIL---KDKLTGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSV 190
Query: 59 RLASE 63
++A E
Sbjct: 191 KIAEE 195
>gi|71018821|ref|XP_759641.1| hypothetical protein UM03494.1 [Ustilago maydis 521]
gi|74701642|sp|Q4P8R9.1|PABP_USTMA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|46099399|gb|EAK84632.1| hypothetical protein UM03494.1 [Ustilago maydis 521]
Length = 651
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + R P GV RGF F+ YS EEA A +M+G++ RPL V LA
Sbjct: 350 FAPFGAITSCKIM---RAPS-GVSRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYVALA 405
Query: 62 SEK 64
K
Sbjct: 406 QRK 408
>gi|384498450|gb|EIE88941.1| hypothetical protein RO3G_13652 [Rhizopus delemar RA 99-880]
Length = 454
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G + DF+ + P+ G +GF FI+Y +AK A EKM+G GR L V L
Sbjct: 243 IFEPFGPL---DFVNLHKDPETGRSKGFGFIQYKNANDAKQALEKMNGFELAGRNLKVGL 299
Query: 61 ASEK 64
SEK
Sbjct: 300 VSEK 303
>gi|293334639|ref|NP_001169755.1| uncharacterized protein LOC100383636 [Zea mays]
gi|224031469|gb|ACN34810.1| unknown [Zea mays]
gi|414887660|tpg|DAA63674.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
gi|414887661|tpg|DAA63675.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 246
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YG+IV ++ R + G RGFAF+ Y ++EA+ A E++ GRL GR ++V+
Sbjct: 36 LFDKYGEIVD---IYIPRDRRTGDSRGFAFVRYKYEDEAQKAVERLDGRLVDGREIMVQF 92
Query: 61 ASEKYLEDAAQ-NSSKAVGEANKTG 84
A KY +A + N + V + G
Sbjct: 93 A--KYGPNAERINKGRIVEPVPRPG 115
>gi|356554642|ref|XP_003545653.1| PREDICTED: probable RNA-binding protein 19-like [Glycine max]
Length = 824
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 7/64 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGP-KRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVR 59
+FSP+G+I S R P K G RGFAF+EY T++EAK A+E + GR L++
Sbjct: 717 LFSPFGQIKS------LRLPMKFGSHRGFAFVEYVTQQEAKNAREALASTHLYGRHLLIE 770
Query: 60 LASE 63
A E
Sbjct: 771 HAKE 774
>gi|323448247|gb|EGB04148.1| hypothetical protein AURANDRAFT_70409 [Aureococcus anophagefferens]
Length = 616
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+ YG I S + R P G RGF F+ +S+ EEA A +M+ +L G+P+ V LA
Sbjct: 312 FTEYGTITSARVM---REPATGTSRGFGFVCFSSPEEAAKAVTEMNNKLVLGKPIFVALA 368
Query: 62 SEKYLEDA 69
K + A
Sbjct: 369 QRKEVRRA 376
>gi|313240198|emb|CBY32547.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G I+ + R P G +GFAFI YS+ E A A E M+G+ C RP+ + A
Sbjct: 118 FSAFGVILQTPKIM--RDPDTGNSKGFAFINYSSFEAADAALEAMNGQYLCNRPITISFA 175
Query: 62 SEK 64
+K
Sbjct: 176 FKK 178
>gi|448878314|gb|AGE46120.1| arginine/serine-rich splicing factor SC30 transcript I [Sorghum
bicolor]
Length = 250
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YG+IV ++ R + G RGFAF+ Y ++EA+ A +++ GRL GR ++V+
Sbjct: 35 LFDKYGEIVD---IYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRLVDGREIMVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|313237737|emb|CBY12875.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G I+ + R P G +GFAFI YS+ E A A E M+G+ C RP+ + A
Sbjct: 118 FSAFGVILQTPKIM--RDPDTGNSKGFAFINYSSFEAADAALEAMNGQYLCNRPITISFA 175
Query: 62 SEK 64
+K
Sbjct: 176 FKK 178
>gi|399218373|emb|CCF75260.1| unnamed protein product [Babesia microti strain RI]
Length = 485
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I+S + R P G P+GFAFIEY EA+ A M G GR + V L
Sbjct: 241 LFVPFGEILSVEL---HRDPFTGKPKGFAFIEYKRASEAREAMLAMDGFEISGRNIKVNL 297
Query: 61 ASE 63
S+
Sbjct: 298 TSD 300
>gi|9843653|emb|CAC03600.1| splicing factor SC35 [Arabidopsis thaliana]
Length = 303
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F+ YGK+V ++ R + G RGFAF+ Y K+EA A E++ GR+ GR + V+
Sbjct: 35 LFAKYGKVVD---VFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERLDGRVVDGREITVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|291245052|ref|XP_002742405.1| PREDICTED: MGC81970 protein-like isoform 2 [Saccoglossus
kowalevskii]
Length = 444
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI D + + + G +G+ FI + E+AK A E+++G GRP+ V
Sbjct: 163 IFEPFGKI---DNIQLMKDNETGRSKGYGFITFHDAEDAKKALEQLNGFELAGRPMKVGH 219
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DAA ++S + ++G GT+G++ AK+A
Sbjct: 220 VTER--SDAATDASFLDSDDLERSGIDLGTTGRLQLMAKLA 258
>gi|15237641|ref|NP_201225.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|30697964|ref|NP_851261.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|9759396|dbj|BAB09851.1| unnamed protein product [Arabidopsis thaliana]
gi|17380868|gb|AAL36246.1| unknown protein [Arabidopsis thaliana]
gi|21689657|gb|AAM67450.1| unknown protein [Arabidopsis thaliana]
gi|22022546|gb|AAM83231.1| AT5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|23505861|gb|AAN28790.1| At5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|332010470|gb|AED97853.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|332010471|gb|AED97854.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
Length = 303
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F+ YGK+V ++ R + G RGFAF+ Y K+EA A E++ GR+ GR + V+
Sbjct: 35 LFAKYGKVVD---VFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERLDGRVVDGREITVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|391332716|ref|XP_003740776.1| PREDICTED: polyadenylate-binding protein 1-like [Metaseiulus
occidentalis]
Length = 660
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+PYG I S + + G + +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 316 FAPYGTITSAKVMMDSTGARS---KGFGFVCFSSPEEATKAVTEMNGRIIVQKPLYVALA 372
Query: 62 SEK 64
K
Sbjct: 373 QRK 375
>gi|328683477|gb|AEB33504.1| LD25793p [Drosophila melanogaster]
Length = 250
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+FSPYG IV + L R G PRG AF+ Y+ +EEA+ A + ++ + G +P+ V
Sbjct: 5 IFSPYGLIVQRNIL---RDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWV 61
Query: 59 RLASEKYLEDAAQ 71
RLA E AAQ
Sbjct: 62 RLAEEHGKAKAAQ 74
>gi|303275187|ref|XP_003056892.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461244|gb|EEH58537.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 302
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G +++ + R P G RGF F+ Y + E A A E M+G+ C RP+ V A
Sbjct: 115 FSAFGVVITTPKI--MRDPDSGNSRGFGFVSYDSFEAADAAIEAMNGQFLCNRPISVTFA 172
Query: 62 SEK 64
+K
Sbjct: 173 YKK 175
>gi|294928940|ref|XP_002779243.1| Glycine-rich RNA-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239888268|gb|EER11038.1| Glycine-rich RNA-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 238
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
MF P+G I S + +G V RGF F+ +ST EEA A MH +L G+PL V
Sbjct: 102 MFEPFGTITSVKVMTDDKG----VSRGFGFVCFSTHEEATKAVTDMHLKLIGGKPLYV 155
>gi|255555393|ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223542114|gb|EEF43658.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 644
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FSP+G I S + R P G+ RG F+ +ST EEA A +M+G++ +PL V L
Sbjct: 325 LFSPFGTITSCKVM---RDPN-GISRGSGFVAFSTPEEASKALMEMNGKMVVSKPLYVAL 380
Query: 61 ASEK 64
A K
Sbjct: 381 AQRK 384
>gi|198427368|ref|XP_002127424.1| PREDICTED: similar to RNA binding motif protein 18 [Ciona
intestinalis]
Length = 204
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 6 GKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65
GK D+++H GP G+ RGF+F+ + TK++A+ A + ++G+ + L+ R A E+
Sbjct: 52 GKFKDLDYIYHKAGPMVGLSRGFSFVTFETKKDAEKAIKILNGKQVLSKKLIARWAHEQP 111
Query: 66 L 66
+
Sbjct: 112 I 112
>gi|195456590|ref|XP_002075201.1| GK16696 [Drosophila willistoni]
gi|194171286|gb|EDW86187.1| GK16696 [Drosophila willistoni]
Length = 508
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+FSP+G+IV + L R G PRG AF+ Y+ +EEA+ A + ++ + G +P+ V
Sbjct: 217 IFSPFGQIVQRNIL---RDKLTGRPRGVAFVRYNKREEAQEAIKSLNNTIPEGGSQPIWV 273
Query: 59 RLASEKYLEDAAQNSSKAVG 78
RLA E AAQ S+ G
Sbjct: 274 RLAEEHGKAKAAQFMSQIGG 293
>gi|323448756|gb|EGB04650.1| hypothetical protein AURANDRAFT_55048 [Aureococcus anophagefferens]
Length = 604
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+ YG I S + R P G RGF F+ +S+ EEA A +M+ +L G+P+ V LA
Sbjct: 320 FAEYGTITSARVM---REPATGTSRGFGFVCFSSPEEAAKAVTEMNNKLVLGKPIFVALA 376
Query: 62 SEKYLEDAAQNSSKA 76
K + A + A
Sbjct: 377 QRKEVRRAQLEAQHA 391
>gi|294940190|ref|XP_002782709.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239894589|gb|EER14504.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 716
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
MF P+G + S + +GV RGF F+ +ST EEA A MH +L G+PL V
Sbjct: 394 MFEPFGTVTSVKVMVD----DKGVSRGFGFVCFSTHEEATKAVTDMHLKLIGGKPLYV 447
>gi|294889687|ref|XP_002772922.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239877502|gb|EER04738.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 715
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
MF P+G + S + +GV RGF F+ +ST EEA A MH +L G+PL V
Sbjct: 394 MFEPFGTVTSVKVMVD----DKGVSRGFGFVCFSTHEEATKAVTDMHLKLIGGKPLYV 447
>gi|431894348|gb|ELK04148.1| RNA-binding protein 39 [Pteropus alecto]
Length = 601
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 346 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 402
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 403 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 441
>gi|320168309|gb|EFW45208.1| RNA binding domain-containing protein [Capsaspora owczarzaki ATCC
30864]
Length = 1179
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 8/65 (12%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKR--GVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
+FSP+G++ S R P++ G RGFAFIE+ TKEEAK A E + GR LV+
Sbjct: 1082 VFSPFGQLKS------VRLPQKPGGQHRGFAFIEFLTKEEAKKAFESLKATHFYGRHLVL 1135
Query: 59 RLASE 63
A+E
Sbjct: 1136 EWAAE 1140
>gi|294879376|ref|XP_002768666.1| glycine-rich RNA-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239871376|gb|EER01384.1| glycine-rich RNA-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 342
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
MF P+G I S + +GV RGF F+ +ST EEA A MH +L G+PL V
Sbjct: 164 MFEPFGTITSVKVM----TDDKGVSRGFGFVCFSTHEEATKAVTDMHLKLIGGKPLYV 217
>gi|47223169|emb|CAG11304.1| unnamed protein product [Tetraodon nigroviridis]
Length = 642
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+PYG I S + T GP+ RGF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 312 FAPYGTITSAKVM--TDGPQS---RGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 366
Query: 62 SEK 64
+
Sbjct: 367 QRR 369
>gi|195469719|ref|XP_002099784.1| GE16683 [Drosophila yakuba]
gi|194187308|gb|EDX00892.1| GE16683 [Drosophila yakuba]
Length = 563
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+FSPYG IV + L R G PRG AF+ Y+ +EEA+ A + ++ + G +P+ V
Sbjct: 218 IFSPYGLIVQRNIL---RDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWV 274
Query: 59 RLASEKYLEDAAQ 71
RLA E AAQ
Sbjct: 275 RLAEEHGKAKAAQ 287
>gi|224105583|ref|XP_002313862.1| predicted protein [Populus trichocarpa]
gi|222850270|gb|EEE87817.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FSP+G I S + R P G+ RG F+ +ST EEA A +M+G++ +PL V L
Sbjct: 326 LFSPFGTITSCKVM---RDPN-GISRGSGFVAFSTPEEASRALLEMNGKMVASKPLYVAL 381
Query: 61 ASEK 64
A K
Sbjct: 382 AQRK 385
>gi|224060514|ref|XP_002300227.1| predicted protein [Populus trichocarpa]
gi|222847485|gb|EEE85032.1| predicted protein [Populus trichocarpa]
Length = 644
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FSP+G I S + R P G+ RG F+ +ST EEA A +M+G++ +PL V L
Sbjct: 326 LFSPFGTITSCKVM---RDPN-GISRGSGFVAFSTPEEASRALLEMNGKIVVSKPLYVAL 381
Query: 61 ASEK 64
A K
Sbjct: 382 AQRK 385
>gi|3255957|emb|CAA19655.1| EG:132E8.1 [Drosophila melanogaster]
Length = 485
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+FSPYG IV + L R G PRG AF+ Y+ +EEA+ A + ++ + G +P+ V
Sbjct: 198 IFSPYGLIVQRNIL---RDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWV 254
Query: 59 RLASEKYLEDAAQ 71
RLA E AAQ
Sbjct: 255 RLAEEHGKAKAAQ 267
>gi|332249061|ref|XP_003273679.1| PREDICTED: RNA-binding protein 39 [Nomascus leucogenys]
Length = 432
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 177 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 233
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 234 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 272
>gi|321464387|gb|EFX75395.1| sex-lethal protein variant 2 [Daphnia pulex]
Length = 297
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGR--PLVV 58
+FS +G IV + L + G+PRG AF+ + +EEA A E ++G + GR P+ V
Sbjct: 132 IFSAHGNIVQMNLL---KDKITGMPRGVAFVRFDKREEALAAIEHLNGTIPHGRTNPISV 188
Query: 59 RLASEKYLEDAAQNSSKAVG--EANKTGFVGG 88
++A E + AA + G +A G VGG
Sbjct: 189 KIAEEHGKQKAAYFAGWEAGRQQARPVGNVGG 220
>gi|37681851|gb|AAQ97803.1| poly(A)-binding protein, cytoplasmic 1 [Danio rerio]
Length = 620
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+PYG I S + T G G RGF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FAPYGTITSAKVM--TDG---GHSRGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 368
Query: 62 SEK----------YLEDAAQNSSKAV-GEANKTGFVGGTSGQMNRSAKIAAIKNKLKAL 109
K Y++ A S +A+ G A T + G+ M ++ + N + L
Sbjct: 369 QRKEERKAILTNQYIQRLA--SIRAIPGPAIPTTYQQGSGYYMTSVPQVRSFYNAVPNL 425
>gi|194766912|ref|XP_001965568.1| GF22563 [Drosophila ananassae]
gi|190619559|gb|EDV35083.1| GF22563 [Drosophila ananassae]
Length = 207
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 6 GKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65
G I D L+H GP G RG+AF+ ++ E A A K+ G R + VRLA
Sbjct: 53 GPIEKFDMLFHKGGPMVGQSRGYAFVTFAQNEGATNALMKLDGSNVGNRSIAVRLAKNIK 112
Query: 66 LEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSS 115
+D + + A T G ++++S I AI+ KLK LE ++
Sbjct: 113 YDDLQKPKPRIEIPALGT---GKREEKISKSEAIRAIEAKLKVLERQTDD 159
>gi|194386804|dbj|BAG61212.1| unnamed protein product [Homo sapiens]
Length = 502
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 247 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 303
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 304 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 342
>gi|392571432|gb|EIW64604.1| splicing factor CC1-like protein [Trametes versicolor FP-101664
SS1]
Length = 344
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ +F+ R P G +G+AF++Y E+AK+A E+M G GR L V
Sbjct: 137 VFEPFGEL---EFVDLHRDPMTGRSKGYAFVQYKRAEDAKMALEQMEGFELAGRTLRVNT 193
Query: 61 ASEK 64
EK
Sbjct: 194 VHEK 197
>gi|221041852|dbj|BAH12603.1| unnamed protein product [Homo sapiens]
Length = 337
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 112 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 168
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 169 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 207
>gi|170059107|ref|XP_001865216.1| RNA binding motif protein 18 [Culex quinquefasciatus]
gi|167878044|gb|EDS41427.1| RNA binding motif protein 18 [Culex quinquefasciatus]
Length = 160
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%)
Query: 13 FLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQN 72
L+H GP G PRG+AF+ Y +++++ A E ++G+ + +VVR A ++ +
Sbjct: 1 MLFHRSGPMAGYPRGYAFVTYDRQQDSERALEMLNGKQIGDKHMVVRWAKNVNRDEMERA 60
Query: 73 SSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSS 115
K A G G G +++ KI A++ KLK +E S
Sbjct: 61 KPKIQIPALAGGSKAGAGGPVSQQTKIQALEAKLKMMESRSDD 103
>gi|348520896|ref|XP_003447963.1| PREDICTED: RNA binding protein fox-1 homolog 2-like [Oreochromis
niloticus]
Length = 454
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + + +A+ A+EK+HG L GR + V
Sbjct: 222 MFGQFGKILDVEIIFNERGSK-----GFGFVTFESSADAERAREKLHGTLVEGRKIEVNN 276
Query: 61 ASEKYLEDAAQNSSKAVGEA 80
A+ + + + + + GE
Sbjct: 277 ATARVMTNKKMTTPYSNGEG 296
>gi|325182450|emb|CCA16902.1| polyadenylatebinding protein putative [Albugo laibachii Nc14]
Length = 675
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+ YG I S + + G RG F F+ +ST EEA A +M+G+L G+P+ V A
Sbjct: 381 FTNYGTITSARVMRDSTGNSRG----FGFVCFSTPEEAATAVAEMNGKLITGKPVYVAFA 436
Query: 62 SEKYLEDA---AQNSSKAVG 78
K + A AQ++ +A G
Sbjct: 437 QRKEVRRAQLEAQHAQRATG 456
>gi|336176066|ref|NP_001229529.1| RNA-binding protein 39 isoform d [Homo sapiens]
gi|73991836|ref|XP_865202.1| PREDICTED: RNA-binding protein 39 isoform 16 [Canis lupus
familiaris]
gi|296199705|ref|XP_002747280.1| PREDICTED: RNA-binding protein 39 isoform 3 [Callithrix jacchus]
gi|332858230|ref|XP_003316933.1| PREDICTED: uncharacterized protein LOC458443 isoform 3 [Pan
troglodytes]
gi|335304749|ref|XP_003360015.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719245|ref|XP_003363967.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|426391513|ref|XP_004062117.1| PREDICTED: RNA-binding protein 39 isoform 4 [Gorilla gorilla
gorilla]
Length = 502
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 247 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 303
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 304 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 342
>gi|41054151|ref|NP_956133.1| polyadenylate-binding protein 1-like [Danio rerio]
gi|27881953|gb|AAH44513.1| Zgc:55855 [Danio rerio]
gi|182890236|gb|AAI65470.1| Zgc:55855 protein [Danio rerio]
Length = 620
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+PYG I S + T G G RGF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FAPYGTITSAKVM--TDG---GHSRGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 368
Query: 62 SEK----------YLEDAAQNSSKAV-GEANKTGFVGGTSGQMNRSAKIAAIKNKLKAL 109
K Y++ A S +A+ G A T + G+ M ++ + N + L
Sbjct: 369 QRKEERKAILTNQYIQRLA--SIRAIPGPAIPTTYQQGSGYYMTSVPQVRSFYNAVPNL 425
>gi|443695245|gb|ELT96187.1| hypothetical protein CAPTEDRAFT_148377 [Capitella teleta]
Length = 277
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI D + + + G +G+ FI + T E+AK A E+++G GRP+ V
Sbjct: 20 IFDPFGKI---DDIKLMKNHETGRSQGYGFITFHTAEDAKKALEQLNGFELAGRPMKVGH 76
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ L + S+ + ++ G G +G++ AK+A
Sbjct: 77 VTER-LGETTGPSALDTDDMDRAGIDLGATGRLQLMAKLA 115
>gi|432101442|gb|ELK29624.1| RNA-binding protein 39 [Myotis davidii]
Length = 491
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 247 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 303
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 304 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 342
>gi|426241406|ref|XP_004014582.1| PREDICTED: RNA-binding protein 39 isoform 3 [Ovis aries]
Length = 502
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 247 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPMKVGH 303
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 304 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 342
>gi|184185564|gb|ACC68962.1| RNA binding motif protein 39 isoform a (predicted) [Rhinolophus
ferrumequinum]
Length = 498
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 269 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 325
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 326 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 364
>gi|195347606|ref|XP_002040343.1| GM19131 [Drosophila sechellia]
gi|194121771|gb|EDW43814.1| GM19131 [Drosophila sechellia]
Length = 488
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+FSPYG IV + L R G PRG AF+ Y+ +EEA+ A + ++ + G +P+ V
Sbjct: 198 IFSPYGLIVQRNIL---RDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWV 254
Query: 59 RLASEKYLEDAAQ 71
RLA E AAQ
Sbjct: 255 RLAEEHGKAKAAQ 267
>gi|383859290|ref|XP_003705128.1| PREDICTED: sex-lethal homolog [Megachile rotundata]
Length = 386
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+FS YG IV ++ L + G+PRG AF+ + +EEA+ A ++HG + G PL V
Sbjct: 218 IFSKYGNIVQKNIL---KDKITGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSV 274
Query: 59 RLASEKYLEDAA 70
++A E + AA
Sbjct: 275 KIAEEHGKQKAA 286
>gi|395505312|ref|XP_003756986.1| PREDICTED: RNA-binding protein 39 [Sarcophilus harrisii]
Length = 557
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 302 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 358
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 359 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 397
>gi|426241408|ref|XP_004014583.1| PREDICTED: RNA-binding protein 39 isoform 4 [Ovis aries]
Length = 508
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 247 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPMKVGH 303
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 304 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 342
>gi|74179655|dbj|BAE22477.1| unnamed protein product [Mus musculus]
Length = 521
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 266 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 322
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 323 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 361
>gi|61557287|ref|NP_001013225.1| RNA-binding protein 39 [Rattus norvegicus]
gi|392346874|ref|XP_003749654.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Rattus
norvegicus]
gi|60552170|gb|AAH91394.1| RNA binding motif protein 39 [Rattus norvegicus]
gi|74196119|dbj|BAE32977.1| unnamed protein product [Mus musculus]
gi|149030834|gb|EDL85861.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Rattus
norvegicus]
Length = 524
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 269 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 325
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 326 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 364
>gi|336176064|ref|NP_001229528.1| RNA-binding protein 39 isoform c [Homo sapiens]
gi|296199707|ref|XP_002747281.1| PREDICTED: RNA-binding protein 39 isoform 4 [Callithrix jacchus]
gi|332858228|ref|XP_003316932.1| PREDICTED: uncharacterized protein LOC458443 isoform 2 [Pan
troglodytes]
gi|335304745|ref|XP_003360013.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719242|ref|XP_003363966.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|345789990|ref|XP_003433300.1| PREDICTED: RNA-binding protein 39 [Canis lupus familiaris]
gi|426391511|ref|XP_004062116.1| PREDICTED: RNA-binding protein 39 isoform 3 [Gorilla gorilla
gorilla]
gi|124297482|gb|AAI31544.1| RBM39 protein [Homo sapiens]
gi|194389138|dbj|BAG61586.1| unnamed protein product [Homo sapiens]
Length = 508
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 247 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 303
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 304 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 342
>gi|426241404|ref|XP_004014581.1| PREDICTED: RNA-binding protein 39 isoform 2 [Ovis aries]
Length = 524
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 269 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPMKVGH 325
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 326 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 364
>gi|4757926|ref|NP_004893.1| RNA-binding protein 39 isoform b [Homo sapiens]
gi|197097940|ref|NP_001125339.1| RNA-binding protein 39 [Pongo abelii]
gi|149733223|ref|XP_001501876.1| PREDICTED: RNA-binding protein 39 isoform 2 [Equus caballus]
gi|194044529|ref|XP_001925282.1| PREDICTED: RNA-binding protein 39 isoform 2 [Sus scrofa]
gi|296199701|ref|XP_002747278.1| PREDICTED: RNA-binding protein 39 isoform 1 [Callithrix jacchus]
gi|301762104|ref|XP_002916459.1| PREDICTED: RNA-binding protein 39-like [Ailuropoda melanoleuca]
gi|332858226|ref|XP_514808.3| PREDICTED: uncharacterized protein LOC458443 isoform 5 [Pan
troglodytes]
gi|344279921|ref|XP_003411734.1| PREDICTED: RNA-binding protein 39 isoform 2 [Loxodonta africana]
gi|345789988|ref|XP_865124.2| PREDICTED: RNA-binding protein 39 isoform 12 [Canis lupus
familiaris]
gi|354477984|ref|XP_003501197.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Cricetulus
griseus]
gi|426391509|ref|XP_004062115.1| PREDICTED: RNA-binding protein 39 isoform 2 [Gorilla gorilla
gorilla]
gi|75070825|sp|Q5RC80.1|RBM39_PONAB RecName: Full=RNA-binding protein 39; AltName: Full=RNA-binding
motif protein 39
gi|405192|gb|AAA16346.1| splicing factor [Homo sapiens]
gi|55727753|emb|CAH90627.1| hypothetical protein [Pongo abelii]
gi|119596568|gb|EAW76162.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|119596569|gb|EAW76163.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|296480931|tpg|DAA23046.1| TPA: RNA binding motif protein 39 [Bos taurus]
gi|307686241|dbj|BAJ21051.1| RNA binding motif protein 39 [synthetic construct]
gi|344246681|gb|EGW02785.1| RNA-binding protein 39 [Cricetulus griseus]
gi|380783275|gb|AFE63513.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|383408127|gb|AFH27277.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|384939256|gb|AFI33233.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|410218748|gb|JAA06593.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255438|gb|JAA15686.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292902|gb|JAA25051.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350855|gb|JAA42031.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350863|gb|JAA42035.1| RNA binding motif protein 39 [Pan troglodytes]
Length = 524
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 269 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 325
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 326 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 364
>gi|426241414|ref|XP_004014586.1| PREDICTED: RNA-binding protein 39 isoform 7 [Ovis aries]
Length = 367
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 112 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPMKVGH 168
Query: 61 ASEKYLEDAAQNSSKA-VGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 169 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 207
>gi|426241410|ref|XP_004014584.1| PREDICTED: RNA-binding protein 39 isoform 5 [Ovis aries]
Length = 530
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 275 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPMKVGH 331
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 332 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 370
>gi|349604477|gb|AEQ00017.1| RNA-binding protein 39-like protein, partial [Equus caballus]
Length = 374
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 252 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 308
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 309 VTERT--DASSASSFLDSDELERTGIDLGTTGRLQLMARLA 347
>gi|410953912|ref|XP_003983612.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39 [Felis
catus]
Length = 523
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 268 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 324
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 325 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 363
>gi|88682991|gb|AAI05542.1| RBM39 protein [Bos taurus]
Length = 528
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 273 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 329
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 330 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 368
>gi|432871158|ref|XP_004071861.1| PREDICTED: RNA binding protein fox-1 homolog 2-like [Oryzias
latipes]
Length = 461
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A+ A+EK+HG L GR + V
Sbjct: 223 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADAEKAREKLHGTLVEGRKIEVNN 277
Query: 61 ASEKYLEDAAQNSSKAVGEANKT 83
A+ + + + S GEA T
Sbjct: 278 ATARVMTNKKMVSPYPNGEALST 300
>gi|330688445|ref|NP_001193433.1| RNA-binding protein 39 [Bos taurus]
Length = 530
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 275 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 331
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 332 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 370
>gi|410055060|ref|XP_003953766.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391517|ref|XP_004062119.1| PREDICTED: RNA-binding protein 39 isoform 6 [Gorilla gorilla
gorilla]
gi|20988961|gb|AAH30493.1| Rbm39 protein [Mus musculus]
gi|34364789|emb|CAE45833.1| hypothetical protein [Homo sapiens]
gi|111598490|gb|AAH82607.1| Rbm39 protein [Mus musculus]
gi|119596570|gb|EAW76164.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_d [Homo
sapiens]
gi|149030835|gb|EDL85862.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_g [Rattus
norvegicus]
Length = 367
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 112 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 168
Query: 61 ASEKYLEDAAQNSSKA-VGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 169 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 207
>gi|356558254|ref|XP_003547422.1| PREDICTED: cold-inducible RNA-binding protein-like [Glycine max]
Length = 86
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FSP+G + D P P+GF F+ + ++ EA+ A M+GR+ GR ++V L
Sbjct: 26 LFSPFGLVTQADLALD---PITKRPKGFGFVSFKSEIEAEKALRAMNGRIVSGRLILVEL 82
Query: 61 ASEK 64
A+EK
Sbjct: 83 ANEK 86
>gi|297845300|ref|XP_002890531.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
gi|297336373|gb|EFH66790.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MFS YG + S + + +G+ RGF F+ YS EEA A +M+G++ +PL + L
Sbjct: 351 MFSEYGNVTSSKVMLN----PQGLSRGFGFVAYSNPEEALRALSEMNGKMIGKKPLYIAL 406
Query: 61 ASEK 64
A K
Sbjct: 407 AQRK 410
>gi|148674239|gb|EDL06186.1| RNA binding motif protein 39, isoform CRA_d [Mus musculus]
Length = 507
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 252 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 308
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 309 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 347
>gi|126291195|ref|XP_001371651.1| PREDICTED: RNA-binding protein 39 isoform 1 [Monodelphis domestica]
Length = 524
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 269 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 325
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 326 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 364
>gi|281212216|gb|EFA86376.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 562
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS YG I S + +G +GF F+ YST +EA A +MHGR+ +PL V A
Sbjct: 302 FSAYGTITSSKVMRDDKGSSS---KGFGFVCYSTPDEASKAVAEMHGRMVGSKPLYVAFA 358
Query: 62 SEK 64
K
Sbjct: 359 QRK 361
>gi|426241412|ref|XP_004014585.1| PREDICTED: RNA-binding protein 39 isoform 6 [Ovis aries]
gi|426241416|ref|XP_004014587.1| PREDICTED: RNA-binding protein 39 isoform 8 [Ovis aries]
Length = 373
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 112 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPMKVGH 168
Query: 61 ASEKYLEDAAQNSSKA-VGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 169 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 207
>gi|410055058|ref|XP_003316934.2| PREDICTED: uncharacterized protein LOC458443 isoform 4 [Pan
troglodytes]
gi|410055062|ref|XP_003953767.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391515|ref|XP_004062118.1| PREDICTED: RNA-binding protein 39 isoform 5 [Gorilla gorilla
gorilla]
gi|426391519|ref|XP_004062120.1| PREDICTED: RNA-binding protein 39 isoform 7 [Gorilla gorilla
gorilla]
gi|119596566|gb|EAW76160.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
gi|119596571|gb|EAW76165.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
Length = 373
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 112 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 168
Query: 61 ASEKYLEDAAQNSSKA-VGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 169 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 207
>gi|224077247|ref|XP_002192236.1| PREDICTED: RNA-binding protein 39 [Taeniopygia guttata]
Length = 522
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 269 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 325
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 326 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 364
>gi|119596572|gb|EAW76166.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_e [Homo
sapiens]
Length = 445
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 269 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 325
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 326 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 364
>gi|118100450|ref|XP_425690.2| PREDICTED: RNA-binding protein 39 [Gallus gallus]
gi|363741409|ref|XP_003642487.1| PREDICTED: RNA-binding protein 39-like [Gallus gallus]
Length = 522
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 269 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 325
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 326 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 364
>gi|34365067|emb|CAE45890.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 112 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 168
Query: 61 ASEKYLEDAAQNSSKA-VGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 169 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 207
>gi|17063213|gb|AAL32373.1| transcription coactivator CAPER [Mus musculus]
Length = 530
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 269 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 325
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 326 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 364
>gi|226530532|ref|NP_001140562.1| uncharacterized protein LOC100272627 [Zea mays]
gi|194699996|gb|ACF84082.1| unknown [Zea mays]
gi|414590932|tpg|DAA41503.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 251
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YG+IV ++ R + G RGFAF+ Y ++EA+ A +++ GRL GR ++V+
Sbjct: 36 LFDKYGEIVD---IYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRLVDGREIMVQF 92
Query: 61 A 61
A
Sbjct: 93 A 93
>gi|118403314|ref|NP_573505.2| RNA-binding protein 39 [Mus musculus]
gi|392346872|ref|XP_003749653.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Rattus
norvegicus]
gi|341941811|sp|Q8VH51.2|RBM39_MOUSE RecName: Full=RNA-binding protein 39; AltName: Full=Coactivator of
activating protein 1 and estrogen receptors;
Short=Coactivator of AP-1 and ERs; AltName:
Full=RNA-binding motif protein 39; AltName:
Full=RNA-binding region-containing protein 2; AltName:
Full=Transcription coactivator CAPER
gi|55991480|gb|AAH86645.1| RNA binding motif protein 39 [Mus musculus]
gi|74151058|dbj|BAE27657.1| unnamed protein product [Mus musculus]
gi|148674237|gb|EDL06184.1| RNA binding motif protein 39, isoform CRA_b [Mus musculus]
Length = 530
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 269 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 325
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 326 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 364
>gi|356521524|ref|XP_003529405.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 651
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FSP+G I S + R P G+ RG F+ +ST EEA A +M+G++ +PL V L
Sbjct: 332 LFSPFGTITSCKVM---RDPN-GLSRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVTL 387
Query: 61 ASEK 64
A K
Sbjct: 388 AQRK 391
>gi|190402270|gb|ACE77680.1| RNA binding motif protein 39 isoform a (predicted) [Sorex araneus]
Length = 435
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 269 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 325
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 326 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 364
>gi|62857615|ref|NP_001016788.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|62201342|gb|AAH93451.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|89273890|emb|CAJ83908.1| RNA-binding region (RNP1, RRM) containing 2 [Xenopus (Silurana)
tropicalis]
Length = 542
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 270 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 326
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 327 VTER--TDASNASSFLDSDELERTGIDLGTTGRLQLMARLA 365
>gi|355784531|gb|EHH65382.1| RNA-binding motif protein 39 [Macaca fascicularis]
Length = 530
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 269 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 325
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 326 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 364
>gi|260828249|ref|XP_002609076.1| hypothetical protein BRAFLDRAFT_60256 [Branchiostoma floridae]
gi|229294430|gb|EEN65086.1| hypothetical protein BRAFLDRAFT_60256 [Branchiostoma floridae]
Length = 495
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGR 54
FSP+G I + D W K +G+AFIEY E A+LA E+M+G + GR
Sbjct: 90 FSPFGPIKNIDLSWDPLTMKH---KGYAFIEYEIPEAAQLALEQMNGVMLGGR 139
>gi|119596573|gb|EAW76167.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Homo
sapiens]
Length = 423
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 269 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 325
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 326 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 364
>gi|35493811|ref|NP_909122.1| RNA-binding protein 39 isoform a [Homo sapiens]
gi|281182530|ref|NP_001162566.1| RNA-binding protein 39 [Papio anubis]
gi|284004921|ref|NP_001164806.1| RNA-binding protein 39 [Oryctolagus cuniculus]
gi|149733225|ref|XP_001501869.1| PREDICTED: RNA-binding protein 39 isoform 1 [Equus caballus]
gi|296199703|ref|XP_002747279.1| PREDICTED: RNA-binding protein 39 isoform 2 [Callithrix jacchus]
gi|332858224|ref|XP_003316931.1| PREDICTED: uncharacterized protein LOC458443 isoform 1 [Pan
troglodytes]
gi|335304742|ref|XP_003360012.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|344279919|ref|XP_003411733.1| PREDICTED: RNA-binding protein 39 isoform 1 [Loxodonta africana]
gi|345789986|ref|XP_864959.2| PREDICTED: RNA-binding protein 39 isoform 3 [Canis lupus
familiaris]
gi|354477982|ref|XP_003501196.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Cricetulus
griseus]
gi|397523808|ref|XP_003831910.1| PREDICTED: RNA-binding protein 39 [Pan paniscus]
gi|426391507|ref|XP_004062114.1| PREDICTED: RNA-binding protein 39 isoform 1 [Gorilla gorilla
gorilla]
gi|28201880|sp|Q14498.2|RBM39_HUMAN RecName: Full=RNA-binding protein 39; AltName: Full=Hepatocellular
carcinoma protein 1; AltName: Full=RNA-binding motif
protein 39; AltName: Full=RNA-binding region-containing
protein 2; AltName: Full=Splicing factor HCC1
gi|405194|gb|AAA16347.1| splicing factor [Homo sapiens]
gi|119596565|gb|EAW76159.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|119596567|gb|EAW76161.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|146327034|gb|AAI41836.1| RNA binding motif protein 39 [Homo sapiens]
gi|164623752|gb|ABY64678.1| RNA binding motif protein 39, isoform 1 (predicted) [Papio anubis]
gi|165971473|gb|AAI58173.1| RNA binding motif protein 39 [Homo sapiens]
gi|166831598|gb|ABY90123.1| RNA binding motif protein 39 isoform a (predicted) [Callithrix
jacchus]
gi|169731519|gb|ACA64891.1| RNA binding motif protein 39 isoform a (predicted) [Callicebus
moloch]
gi|197215647|gb|ACH53039.1| RNA binding motif protein 39 isoform a (predicted) [Otolemur
garnettii]
gi|217038339|gb|ACJ76632.1| RNA binding motif protein 39 isoform a (predicted) [Oryctolagus
cuniculus]
gi|229368730|gb|ACQ63013.1| RNA binding motif protein 39 isoform a (predicted) [Dasypus
novemcinctus]
gi|351702535|gb|EHB05454.1| RNA-binding protein 39 [Heterocephalus glaber]
gi|380783277|gb|AFE63514.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|383408125|gb|AFH27276.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|384939254|gb|AFI33232.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|410218746|gb|JAA06592.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255434|gb|JAA15684.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292900|gb|JAA25050.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292904|gb|JAA25052.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350859|gb|JAA42033.1| RNA binding motif protein 39 [Pan troglodytes]
gi|440902514|gb|ELR53299.1| RNA-binding protein 39 [Bos grunniens mutus]
Length = 530
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 269 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 325
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 326 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 364
>gi|238011430|gb|ACR36750.1| unknown [Zea mays]
gi|414590933|tpg|DAA41504.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590934|tpg|DAA41505.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 190
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YG+IV ++ R + G RGFAF+ Y ++EA+ A +++ GRL GR ++V+
Sbjct: 36 LFDKYGEIVD---IYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRLVDGREIMVQF 92
Query: 61 A 61
A
Sbjct: 93 A 93
>gi|194384132|dbj|BAG64839.1| unnamed protein product [Homo sapiens]
Length = 521
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 260 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 316
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 317 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 355
>gi|52545994|emb|CAH18281.2| hypothetical protein [Homo sapiens]
Length = 513
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 252 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 308
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 309 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 347
>gi|426241402|ref|XP_004014580.1| PREDICTED: RNA-binding protein 39 isoform 1 [Ovis aries]
Length = 530
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 269 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPMKVGH 325
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 326 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 364
>gi|9930616|gb|AAG02117.1|AF293840_1 poly(A) binding protein [Arabidopsis thaliana]
Length = 660
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MFS YG + S + + +G+ RGF F+ YS EEA A +M+G++ +PL + L
Sbjct: 351 MFSEYGNVTSSKVMLN----PQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIAL 406
Query: 61 ASEK 64
A K
Sbjct: 407 AQRK 410
>gi|315046346|ref|XP_003172548.1| hypothetical protein MGYG_05139 [Arthroderma gypseum CBS 118893]
gi|311342934|gb|EFR02137.1| hypothetical protein MGYG_05139 [Arthroderma gypseum CBS 118893]
Length = 304
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 3 SPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLAS 62
S YGK++ ++ TRG + RGF ++ + + EEAK A ++MH GR L V A
Sbjct: 115 SKYGKVLGTRIIYDTRG----LSRGFGYVRFQSVEEAKKAIDEMHLSEYEGRKLSVNFAQ 170
Query: 63 EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMN 94
+ E+ Q E +T FVG + Q+
Sbjct: 171 IELREEQPQKQM----EPTRTIFVGNIAHQIT 198
>gi|296199709|ref|XP_002747282.1| PREDICTED: RNA-binding protein 39 isoform 5 [Callithrix jacchus]
Length = 504
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 243 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 299
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 300 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 338
>gi|291245050|ref|XP_002742404.1| PREDICTED: MGC81970 protein-like isoform 1 [Saccoglossus
kowalevskii]
Length = 556
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI D + + + G +G+ FI + E+AK A E+++G GRP+ V
Sbjct: 275 IFEPFGKI---DNIQLMKDNETGRSKGYGFITFHDAEDAKKALEQLNGFELAGRPMKVGH 331
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DAA ++S + ++G GT+G++ AK+A
Sbjct: 332 VTER--SDAATDASFLDSDDLERSGIDLGTTGRLQLMAKLA 370
>gi|281204064|gb|EFA78260.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 617
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 21 KRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEA 80
+ G RGF F+ YST+EEA +A EKM+G + +PL V ++ KY + Q S +
Sbjct: 493 ENGKNRGFGFLSYSTQEEANIAIEKMNGFILGSKPLSVSFSNRKYKKRMQQLQSNGSNDP 552
Query: 81 NK 82
++
Sbjct: 553 SQ 554
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
FS +G I+S + ++GV +G+ ++ + T+E + A + ++G + CG+P+ V
Sbjct: 248 FSKFGNILSCKIEY-----EKGVSKGYGYVHFETQESSDRAIQGVNGTMLCGKPITV 299
>gi|194386036|dbj|BAG59582.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 242 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 298
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 299 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 337
>gi|355715684|gb|AES05403.1| RNA binding motif protein 39 [Mustela putorius furo]
Length = 271
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 149 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 205
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 206 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 244
>gi|224099521|ref|XP_002334472.1| predicted protein [Populus trichocarpa]
gi|222872360|gb|EEF09491.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V ++ R + G RGFAF+ Y +EA+ A E++ GR+ GR + V+
Sbjct: 35 LFDKYGKVVD---IFIPRDRRTGESRGFAFVRYKYADEAQKAVERLDGRVVDGREITVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|15219945|ref|NP_173690.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
gi|12643628|sp|O64380.1|PABP3_ARATH RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3
gi|2505869|emb|CAA72907.1| polyA binding protein PAB3 [Arabidopsis thaliana]
gi|15450820|gb|AAK96681.1| Strong similarity to poly(A)-binding protein (PABP5) [Arabidopsis
thaliana]
gi|332192163|gb|AEE30284.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
Length = 660
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MFS YG + S + + +G+ RGF F+ YS EEA A +M+G++ +PL + L
Sbjct: 351 MFSEYGNVTSSKVMLN----PQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIAL 406
Query: 61 ASEK 64
A K
Sbjct: 407 AQRK 410
>gi|417411155|gb|JAA52027.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 491
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 236 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 292
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 293 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 331
>gi|384250449|gb|EIE23928.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 358
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G I+ + R P+ G +GF F+ Y + E + A E M+G+ C RP+ V A
Sbjct: 136 FSAFGMIIQTPKI--MRDPETGATKGFGFVSYDSFEASDAAIEAMNGQFLCNRPITVSFA 193
Query: 62 SEK 64
+K
Sbjct: 194 YKK 196
>gi|224082127|ref|XP_002306575.1| predicted protein [Populus trichocarpa]
gi|222856024|gb|EEE93571.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V ++ R + G RGFAF+ Y EEA+ A +++ GR+ GR ++V+
Sbjct: 35 LFDKYGKVVD---VFIPRDRRTGESRGFAFVRYKYAEEAQKAVDRLDGRVVDGREIMVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|126291198|ref|XP_001371677.1| PREDICTED: RNA-binding protein 39 isoform 2 [Monodelphis domestica]
Length = 533
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 269 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 325
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 326 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 364
>gi|449265754|gb|EMC76900.1| RNA-binding protein 39, partial [Columba livia]
Length = 423
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 170 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 226
Query: 61 ASEKYLEDAAQNSSKA-VGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 227 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 265
>gi|196009954|ref|XP_002114842.1| hypothetical protein TRIADDRAFT_64128 [Trichoplax adhaerens]
gi|190582904|gb|EDV22976.1| hypothetical protein TRIADDRAFT_64128 [Trichoplax adhaerens]
Length = 620
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
FSP+G I + + W T K +GFAFIE+ T E A+LA E+M+G+L GR + V
Sbjct: 186 FSPFGPIKNINLSWDTVTMKH---KGFAFIEFETPEAAQLALEQMNGQLMGGRNIKV 239
>gi|345316987|ref|XP_003429815.1| PREDICTED: embryonic polyadenylate-binding protein A-like
[Ornithorhynchus anatinus]
Length = 540
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 267 FSPYGTITSAKVMTES-----GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 321
Query: 62 SEK 64
K
Sbjct: 322 QRK 324
>gi|13278367|gb|AAH04000.1| Rbm39 protein [Mus musculus]
Length = 429
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 168 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 224
Query: 61 ASEKYLEDAAQNSSKA-VGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 225 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 263
>gi|403281374|ref|XP_003932163.1| PREDICTED: RNA-binding protein 39 [Saimiri boliviensis boliviensis]
Length = 502
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 269 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 325
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 326 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 364
>gi|256082942|ref|XP_002577710.1| splicing factor [Schistosoma mansoni]
gi|360043601|emb|CCD81147.1| putative splicing factor [Schistosoma mansoni]
Length = 327
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI ED + P +G+ F+ Y ++AK A ++++G GRP+ V
Sbjct: 86 IFEPFGKI--EDIKL-IKDPTTNRSQGYGFVTYVNSDDAKKALDQLNGFELAGRPMKVNH 142
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ + A S+ EA+++G GT+G++ AK+A
Sbjct: 143 VTER--SEYACLSALDNDEADRSGVDLGTTGRLALMAKLA 180
>gi|193785136|dbj|BAG54289.1| unnamed protein product [Homo sapiens]
Length = 506
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 245 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 301
Query: 61 ASEKYLEDAAQNSSKA-VGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 302 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 340
>gi|417411216|gb|JAA52053.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 499
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 238 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 294
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 295 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 333
>gi|258578315|ref|XP_002543339.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
gi|237903605|gb|EEP78006.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
Length = 582
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ DF+ + + G RG+ F+++ +A+ A EKM+G GRP+ V L
Sbjct: 314 VFEPFGEL---DFVQLQKD-ENGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRPIRVGL 369
Query: 61 ASEKYLEDAAQN 72
++K+ D+A N
Sbjct: 370 GNDKFSSDSATN 381
>gi|118484490|gb|ABK94120.1| unknown [Populus trichocarpa]
Length = 302
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V ++ R + G RGFAF+ Y EEA+ A +++ GR+ GR ++V+
Sbjct: 35 LFDKYGKVVD---VFIPRDRRTGESRGFAFVRYKYAEEAQKAVDRLDGRVVDGREIMVQF 91
Query: 61 ASEKYLEDAAQNSSKAVGEA 80
A KY +A + S + E+
Sbjct: 92 A--KYGPNAERIRSGRIVES 109
>gi|384495100|gb|EIE85591.1| hypothetical protein RO3G_10301 [Rhizopus delemar RA 99-880]
Length = 359
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F PYG I S + + G P+GF F+ +S+ +EA A +M+GR +P+ V LA
Sbjct: 300 FLPYGTITSAKIM---KDESTGAPKGFGFVCFSSSDEANRAVAEMNGRFISSKPIYVALA 356
>gi|3287682|gb|AAC25510.1| Strong similarity to gb|M97657 poly(A)-binding protein (PABP5) from
A. thaliana [Arabidopsis thaliana]
Length = 655
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MFS YG + S + + +G+ RGF F+ YS EEA A +M+G++ +PL + L
Sbjct: 351 MFSEYGNVTSSKVMLN----PQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIAL 406
Query: 61 ASEK 64
A K
Sbjct: 407 AQRK 410
>gi|194708586|gb|ACF88377.1| unknown [Zea mays]
gi|414590930|tpg|DAA41501.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590931|tpg|DAA41502.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 238
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YG+IV ++ R + G RGFAF+ Y ++EA+ A +++ GRL GR ++V+
Sbjct: 36 LFDKYGEIVD---IYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRLVDGREIMVQF 92
Query: 61 A 61
A
Sbjct: 93 A 93
>gi|281346065|gb|EFB21649.1| hypothetical protein PANDA_004543 [Ailuropoda melanoleuca]
Length = 497
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 236 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 292
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 293 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 331
>gi|326931688|ref|XP_003211958.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like
[Meleagris gallopavo]
Length = 571
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 318 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 374
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 375 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 413
>gi|307176221|gb|EFN65860.1| Sex-lethal-like protein [Camponotus floridanus]
Length = 272
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+FS YG IV ++ L + G+PRG AF+ + +EEA+ A ++HG + G PL V
Sbjct: 95 IFSKYGNIVQKNIL---KDKLTGLPRGVAFVRFDKREEAQEAIAQLHGTIPEGGSEPLSV 151
Query: 59 RLASE 63
++A E
Sbjct: 152 KIAEE 156
>gi|23197794|gb|AAN15424.1| Strong similarity to poly(A)-binding protein (PABP5) [Arabidopsis
thaliana]
Length = 379
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MFS YG + S + + +G + RGF F+ YS EEA A +M+G++ +PL + L
Sbjct: 70 MFSEYGNVTSSKVMLNPQG----MSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIAL 125
Query: 61 ASEK 64
A K
Sbjct: 126 AQRK 129
>gi|397589630|gb|EJK54733.1| hypothetical protein THAOC_25613, partial [Thalassiosira oceanica]
Length = 200
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 25 PRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGE 79
PRG+AF+EY T AKLA +++GR G+PL VR + K E A+ A E
Sbjct: 115 PRGYAFVEYKTVASAKLAISRLNGRQLLGKPLAVRPSHRKPNETGAKKPKSARKE 169
>gi|324508128|gb|ADY43435.1| RNA-binding protein 39 [Ascaris suum]
Length = 535
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 1 MFSPYGKI----VSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPL 56
+F P+GKI ++ D GV +G+A++ + ++AK A E+M+G GRP+
Sbjct: 288 IFEPFGKIDTLEIATDL--------SGVSKGYAYVTFRHADDAKRAMEQMNGFELAGRPM 339
Query: 57 VVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
V + Q + EA++ G GTSG+++ AK+A
Sbjct: 340 KVGTVDGDEVPSQPQRTLD-TDEADRRGIDLGTSGRLHLMAKLA 382
>gi|242077146|ref|XP_002448509.1| hypothetical protein SORBIDRAFT_06g028190 [Sorghum bicolor]
gi|241939692|gb|EES12837.1| hypothetical protein SORBIDRAFT_06g028190 [Sorghum bicolor]
Length = 620
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGP-KRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVR 59
+FSP+G+I S R P K G RGFAF+EY TK+EA+ A + + GR LV+
Sbjct: 516 LFSPFGQIKS------LRLPMKFGSHRGFAFVEYVTKQEAQNALQALASTHLYGRHLVIE 569
Query: 60 LASE 63
A E
Sbjct: 570 RAKE 573
>gi|221486340|gb|EEE24601.1| splicing factor, putative [Toxoplasma gondii GT1]
Length = 576
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G I+S + R P+ G+ RGF F+ + T E + A M+G+ C RP+ V A
Sbjct: 136 FSAFGNIISAKIM---RDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYA 192
Query: 62 SEK 64
+K
Sbjct: 193 YKK 195
>gi|148226721|ref|NP_001086950.1| RNA binding motif protein 39 [Xenopus laevis]
gi|50414893|gb|AAH77813.1| Rnpc2-prov protein [Xenopus laevis]
Length = 540
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 268 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 324
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 325 VTER--TDASNASSFLDSDELERTGIDLGTTGRLQLMARLA 363
>gi|168015560|ref|XP_001760318.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688332|gb|EDQ74709.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 878
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKR--GVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
+F+P+G+I S R PK+ G RGFAF+E+ TK+EA+ A E + GR +V+
Sbjct: 775 IFNPFGQIKS------IRLPKKFDGNHRGFAFVEFLTKKEAQNAFEALQNTHLYGRHMVL 828
Query: 59 RLASE-KYLEDAAQNSSKAVGEANKTG 84
A E + LE+ ++ EAN G
Sbjct: 829 ERAKEGESLEELRARTASQFSEANNDG 855
Score = 35.0 bits (79), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 27 GFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFV 86
GF FIE+ + + AK+ + + G + G L+++L + NS KA G +KT
Sbjct: 695 GFGFIEFDSVDTAKMVCQNLQGTVLEGHALILQL---------SHNSKKACGSDSKTSAT 745
Query: 87 GGTSGQMNRSAKI 99
G + S KI
Sbjct: 746 KGKAESKESSTKI 758
>gi|195478592|ref|XP_002100575.1| GE17147 [Drosophila yakuba]
gi|194188099|gb|EDX01683.1| GE17147 [Drosophila yakuba]
Length = 219
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 6 GKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65
G I D L+H GP G RG+AF+ ++ E A A K+ G R + VRLA
Sbjct: 65 GAIEKFDMLFHKGGPMVGQSRGYAFVTFAQNEGATNALLKLDGTSVGNRSIAVRLAKNIK 124
Query: 66 LEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSS 115
+D + + A T G +++++ I AI+ KLK LE ++
Sbjct: 125 YDDLQKPKPRLEIPALGT---GKREEKISKTEAIRAIEAKLKVLERQTDD 171
>gi|226469234|emb|CAX70096.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 327
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI ED + P +G+ F+ Y ++AK A ++++G GRP+ V
Sbjct: 86 IFEPFGKI--EDIKL-IKDPATNRSQGYGFVTYVNSDDAKKALDQLNGFELAGRPMKVNH 142
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ + A S+ EA+++G GT+G++ AK+A
Sbjct: 143 VTER--SEYACLSALDNDEADRSGVDLGTTGRLALMAKLA 180
>gi|226504376|ref|NP_001146285.1| uncharacterized protein LOC100279860 [Zea mays]
gi|219886507|gb|ACL53628.1| unknown [Zea mays]
gi|413919482|gb|AFW59414.1| hypothetical protein ZEAMMB73_904714 [Zea mays]
Length = 881
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGP-KRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVR 59
+FSP+G+I S R P K G RGFAF+EY TK+EA+ A + + GR LV+
Sbjct: 777 LFSPFGQIKS------LRLPMKFGSHRGFAFVEYVTKQEAQNALQALASTHLYGRHLVIE 830
Query: 60 LASE 63
A E
Sbjct: 831 RAKE 834
>gi|356552218|ref|XP_003544466.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 652
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF+ YG I S + R P G+ RG F+ +ST EEA A +M+G++ G+PL V L
Sbjct: 334 MFAEYGTITSCKVM---RDPT-GIGRGSGFVAFSTPEEASRALGEMNGKMIAGKPLYVAL 389
Query: 61 ASEK 64
A K
Sbjct: 390 AQRK 393
>gi|255581357|ref|XP_002531488.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528897|gb|EEF30895.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V ++ R + G RGFAF+ Y +EA+ A E++ GR+ GR + V+
Sbjct: 35 LFDKYGKVVD---IFIPRDRRTGDSRGFAFVRYKYADEAQKAVERLDGRVVDGREITVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|221508124|gb|EEE33711.1| splicing factor, putative [Toxoplasma gondii VEG]
Length = 576
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G I+S + R P+ G+ RGF F+ + T E + A M+G+ C RP+ V A
Sbjct: 136 FSAFGNIISAKIM---RDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYA 192
Query: 62 SEK 64
+K
Sbjct: 193 YKK 195
>gi|345495932|ref|XP_001604239.2| PREDICTED: probable RNA-binding protein 18-like [Nasonia
vitripennis]
Length = 199
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64
+G I D L+H GP+ G RG+AF+ Y T +A+ A E + + +VVR A
Sbjct: 42 HGTIEKFDLLFHRSGPQAGQSRGYAFVTYKTARDAESAMETLQNLRVGSKNIVVRYAHS- 100
Query: 65 YLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
+ A + K E +++R I AI+ KLK ++E
Sbjct: 101 -INVAELDKPKPKIEIPALAGAKKDDKKISRETAIQAIEAKLKMMKE 146
>gi|222629159|gb|EEE61291.1| hypothetical protein OsJ_15377 [Oryza sativa Japonica Group]
Length = 613
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS YGKI S + G V +G F+ +ST+EEA A +M+G++ G+PL V
Sbjct: 339 LFSNYGKITSCKIMRDANG----VSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAF 394
Query: 61 ASEK 64
A K
Sbjct: 395 AQRK 398
>gi|357121974|ref|XP_003562691.1| PREDICTED: uncharacterized protein LOC100826320 [Brachypodium
distachyon]
Length = 238
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YG++V ++ R + G RGFAF+ Y ++EA+ A +++ GRL GR ++V+
Sbjct: 35 LFDKYGEVVD---IYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRLVDGREMMVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|237833669|ref|XP_002366132.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211963796|gb|EEA98991.1| splicing factor, putative [Toxoplasma gondii ME49]
Length = 576
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G I+S + R P+ G+ RGF F+ + T E + A M+G+ C RP+ V A
Sbjct: 136 FSAFGNIISAKIM---RDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYA 192
Query: 62 SEK 64
+K
Sbjct: 193 YKK 195
>gi|384245230|gb|EIE18725.1| hypothetical protein COCSUDRAFT_20380 [Coccomyxa subellipsoidea
C-169]
Length = 876
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 8/63 (12%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKR--GVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
+F+P+G+I S R PK+ G RGFAF+++ TK+EAK A E + G GR LVV
Sbjct: 779 LFAPFGQIKS------CRLPKKFDGSHRGFAFVDFLTKQEAKSAAEAVAGTHLYGRRLVV 832
Query: 59 RLA 61
A
Sbjct: 833 EWA 835
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 27 GFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFV 86
GF FIE S+++ AK+A +K G + G L ++L+ K AA+ S+K A TG
Sbjct: 698 GFGFIECSSEDVAKIAIKKQQGSILDGHKLALQLSLRKVGGKAAKPSAKETAAAADTGKA 757
Query: 87 GGTSGQMNRSAKIAAIKNKLKAL 109
GT + R+ A + + AL
Sbjct: 758 KGTK-LVVRNVAFEATRKDVAAL 779
>gi|147900472|ref|NP_001086350.1| MGC81970 protein [Xenopus laevis]
gi|49522239|gb|AAH75146.1| MGC81970 protein [Xenopus laevis]
Length = 512
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 242 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 298
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 299 VTER--TDASNASSFLDSDELERTGIDLGTTGRLQLMARLA 337
>gi|449281934|gb|EMC88877.1| Embryonic polyadenylate-binding protein [Columba livia]
Length = 646
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 330 FSPYGTITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 384
Query: 62 SEK 64
K
Sbjct: 385 QRK 387
>gi|348511410|ref|XP_003443237.1| PREDICTED: RNA binding protein fox-1 homolog 2-like [Oreochromis
niloticus]
Length = 432
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A+ A+EK+HG L GR + V
Sbjct: 156 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADAEKAREKLHGTLVEGRKIEVNN 210
Query: 61 ASEKYLEDAAQNSSKAVGEANKT 83
A+ + + + S GEA T
Sbjct: 211 ATARVMTNKKMVSPYPNGEALST 233
>gi|198468772|ref|XP_001354817.2| GA12965 [Drosophila pseudoobscura pseudoobscura]
gi|198146563|gb|EAL31872.2| GA12965 [Drosophila pseudoobscura pseudoobscura]
Length = 219
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 6 GKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65
G I D L+H GP G RG+AF+ ++ E A A K+ G R + VRLA
Sbjct: 65 GPIEKFDMLFHKGGPMVGQSRGYAFVTFAENEGATNALLKLDGTSVGSRSIAVRLAKNIK 124
Query: 66 LEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSS 115
+D + + A T G ++++S I AI+ KLK LE +
Sbjct: 125 YDDLQKPKPRIEIPALGT---GKREEKISKSEAIRAIEAKLKHLERHTDD 171
>gi|327271618|ref|XP_003220584.1| PREDICTED: RNA-binding protein 39-like [Anolis carolinensis]
Length = 578
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 325 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 381
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 382 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 420
>gi|402588492|gb|EJW82425.1| splicing factor, partial [Wuchereria bancrofti]
Length = 471
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 12/133 (9%)
Query: 1 MFSPYGKI----VSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPL 56
+F P+GKI ++ D GV +G+A++ + ++ K A E+M+G GRP+
Sbjct: 219 IFDPFGKIENLEIATDL--------SGVSKGYAYVTFRHADDGKRAMEQMNGFELAGRPM 270
Query: 57 VVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSA 116
V L + +A++ G GTSG+++ AK+A + A
Sbjct: 271 KVCSVEGDELPPPVPQRTLDTDDADRRGIDLGTSGRLHLMAKLAEGSGLELPKSAKEILA 330
Query: 117 KKQKQADNSSCNG 129
+ Q+Q ++++ G
Sbjct: 331 QNQQQLESATVTG 343
>gi|312070862|ref|XP_003138342.1| hypothetical protein LOAG_02757 [Loa loa]
Length = 648
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 12/133 (9%)
Query: 1 MFSPYGKI----VSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPL 56
+F P+GKI ++ D GV +G+A++ + ++ K A E+M+G GRP+
Sbjct: 396 IFDPFGKIENLEIATDL--------SGVSKGYAYVTFRHADDGKRAMEQMNGFELAGRPM 447
Query: 57 VVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSA 116
V L + +A++ G GTSG+++ AK+A + A
Sbjct: 448 KVCSVEGDELPPPVPQRTLDTDDADRRGIDLGTSGRLHLMAKLAEGSGLELPKSAKEILA 507
Query: 117 KKQKQADNSSCNG 129
+ Q+Q ++++ G
Sbjct: 508 QNQQQLESATATG 520
>gi|59858555|ref|NP_001012304.1| RNA-binding protein 39 [Danio rerio]
gi|27882534|gb|AAH44487.1| RNA binding motif protein 39a [Danio rerio]
gi|182892014|gb|AAI65689.1| Rbm39a protein [Danio rerio]
Length = 523
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 265 IFEPFGRIDSIQLMMDS---ETGRSKGYGFITFSDAECAKKALEQLNGFELAGRPMKVGH 321
Query: 61 ASEKYLEDAAQNSSKAVG-EANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 322 VTER--TDASTASSFLDNDELERTGIDLGTTGRLQLMARLA 360
>gi|195135155|ref|XP_002012000.1| GI16722 [Drosophila mojavensis]
gi|193918264|gb|EDW17131.1| GI16722 [Drosophila mojavensis]
Length = 616
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGR 54
F+P+G I S + W K +GFAF+EY E A+LA E+M+G L GR
Sbjct: 129 FTPFGPIKSINMSWDPITQKH---KGFAFVEYEIPEGAQLALEQMNGALMGGR 178
>gi|413918857|gb|AFW58789.1| hypothetical protein ZEAMMB73_983608 [Zea mays]
Length = 412
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +GKI S + + G+ +G F+ +ST+EEA A +M+G++ G+PL V
Sbjct: 335 LFSNFGKITS----YKVMRDQNGLSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAF 390
Query: 61 ASEK 64
A K
Sbjct: 391 AQRK 394
>gi|341882558|gb|EGT38493.1| hypothetical protein CAEBREN_09163 [Caenorhabditis brenneri]
Length = 757
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
F P+G I S + W P G + FAF+EY E A LA+E M+G++ GR L V
Sbjct: 122 FDPFGPIKSINMSWD---PATGHHKTFAFVEYEIPEAALLAQESMNGQMLGGRNLKV 175
>gi|341895702|gb|EGT51637.1| CBN-RNP-6 protein [Caenorhabditis brenneri]
Length = 757
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
F P+G I S + W P G + FAF+EY E A LA+E M+G++ GR L V
Sbjct: 122 FDPFGPIKSINMSWD---PATGHHKTFAFVEYEIPEAALLAQESMNGQMLGGRNLKV 175
>gi|224073347|ref|XP_002304081.1| predicted protein [Populus trichocarpa]
gi|222841513|gb|EEE79060.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V ++ R + G RGFAF+ Y +EA+ A E++ GR+ GR + V+
Sbjct: 35 LFDKYGKVVD---IFIPRDRRTGESRGFAFVRYKYADEAQKAVERLDGRVVDGREITVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|157817831|ref|NP_001099621.1| poly(A) binding protein, cytoplasmic 2 [Rattus norvegicus]
gi|149017412|gb|EDL76463.1| poly A binding protein, cytoplasmic 2 (predicted) [Rattus
norvegicus]
Length = 630
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSTKVM--TEG---GRSKGFGFVCFSSPEEATKAVSEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|134025329|gb|AAI35084.1| LOC562370 protein [Danio rerio]
Length = 379
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGR 54
F+P+G I S D W + K +GFAF+EY E A+LA E+M+ + GR
Sbjct: 112 FAPFGPIKSIDMSWDSVTLKH---KGFAFVEYEVPEAAQLALEQMNSVMLGGR 161
>gi|242082447|ref|XP_002445992.1| hypothetical protein SORBIDRAFT_07g029220 [Sorghum bicolor]
gi|241942342|gb|EES15487.1| hypothetical protein SORBIDRAFT_07g029220 [Sorghum bicolor]
Length = 266
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F+ ++S + ++HT P+R G+AF+ +S+KE A+ A +G++ GRP+ V L
Sbjct: 186 LFASAPGVISAEVIFHTTTPRRSA--GYAFVSFSSKETAEAAISAFNGKILMGRPINVML 243
Query: 61 ASE 63
E
Sbjct: 244 KDE 246
>gi|300176697|emb|CBK24362.2| unnamed protein product [Blastocystis hominis]
Length = 314
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G++ E + R P+ + +G AF+ Y++ E + E M+G+ GRP+VV+ A
Sbjct: 119 FSQFGQLACEPII--ARDPETNISKGHAFVNYTSFESSDFVIESMNGQYFHGRPIVVQYA 176
Query: 62 SEK 64
+K
Sbjct: 177 YKK 179
>gi|224078006|ref|XP_002190593.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Taeniopygia guttata]
Length = 629
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGTITSAKVM--TEG---GRSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|224066947|ref|XP_002302293.1| predicted protein [Populus trichocarpa]
gi|222844019|gb|EEE81566.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V ++ R + G RGFAF+ Y +EA+ A +++ GR+ GR ++V+
Sbjct: 35 LFDKYGKVVD---VFIPRDRRTGESRGFAFVRYKYADEAQKAVDRLDGRVVDGREIMVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|2393873|gb|AAB70164.1| poly(A)-binding protein testis-specific isoform [Mus musculus]
Length = 603
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 289 FSPFGTITSTKVM--TEG---GRSKGFGFVCFSSPEEATKAVSEMNGRIVATKPLYVALA 343
Query: 62 SEK 64
K
Sbjct: 344 QRK 346
>gi|302695543|ref|XP_003037450.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
gi|300111147|gb|EFJ02548.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
Length = 409
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPL---- 56
+F P+G++ +F+ R P G +G+AF++Y E+A++A E+M G GR L
Sbjct: 201 VFEPFGEL---EFVDLHRDPTTGRSKGYAFVQYKRAEDARMAMEQMEGFELAGRQLKVNT 257
Query: 57 ------VVRLASEKYLEDA 69
VVR A + L+D+
Sbjct: 258 VHDKGGVVRYAQTESLDDS 276
>gi|327293227|ref|XP_003231310.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
gi|326466426|gb|EGD91879.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
Length = 592
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ DF+ R + G +G+ F+++ +A+ A EKM+G GRP+ V L
Sbjct: 318 VFEPFGEL---DFVQLQR-EETGRSKGYGFVQFRDPNQAREALEKMNGFDLAGRPIRVGL 373
Query: 61 ASEKYLEDAAQ 71
++K+ D AQ
Sbjct: 374 GNDKFSHDPAQ 384
>gi|195014784|ref|XP_001984080.1| GH15204 [Drosophila grimshawi]
gi|193897562|gb|EDV96428.1| GH15204 [Drosophila grimshawi]
Length = 643
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGR 54
F+P+G I S + W K +GFAF+EY E A+LA E+M+G L GR
Sbjct: 152 FTPFGPIKSINMSWDPITQKH---KGFAFVEYEIPEGAQLALEQMNGALMGGR 201
>gi|82237387|sp|Q6P0B1.1|CELF2_DANRE RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
AltName: Full=RNA-binding protein BRUNOL-3
gi|41351000|gb|AAH65686.1| Cugbp2 protein [Danio rerio]
Length = 514
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA---CGRPLV 57
MFSPYG+I L RGP G+ RG AF+ +ST+ A+ A + MH C P+V
Sbjct: 155 MFSPYGQIEECRIL---RGPD-GLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMV 210
Query: 58 VRLASEK 64
V+ A +
Sbjct: 211 VKFADTQ 217
>gi|449450504|ref|XP_004143002.1| PREDICTED: uncharacterized protein LOC101216322 [Cucumis sativus]
Length = 257
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V ++ R + G RGFAF+ Y +EA+ A +K+ GR+ GR ++V+
Sbjct: 35 LFDKYGKVVD---VFIPRDRRTGDSRGFAFVRYKYADEAQKAIDKLDGRMLDGREIMVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|393910287|gb|EFO25730.2| hypothetical protein LOAG_02757 [Loa loa]
Length = 526
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 12/133 (9%)
Query: 1 MFSPYGKI----VSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPL 56
+F P+GKI ++ D GV +G+A++ + ++ K A E+M+G GRP+
Sbjct: 274 IFDPFGKIENLEIATDL--------SGVSKGYAYVTFRHADDGKRAMEQMNGFELAGRPM 325
Query: 57 VVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSA 116
V L + +A++ G GTSG+++ AK+A + A
Sbjct: 326 KVCSVEGDELPPPVPQRTLDTDDADRRGIDLGTSGRLHLMAKLAEGSGLELPKSAKEILA 385
Query: 117 KKQKQADNSSCNG 129
+ Q+Q ++++ G
Sbjct: 386 QNQQQLESATATG 398
>gi|326931817|ref|XP_003212020.1| PREDICTED: embryonic polyadenylate-binding protein-like [Meleagris
gallopavo]
Length = 633
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGTITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|119186105|ref|XP_001243659.1| hypothetical protein CIMG_03100 [Coccidioides immitis RS]
gi|392870366|gb|EAS32162.2| CC1-like family splicing factor [Coccidioides immitis RS]
Length = 595
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ DF+ + + G RG+ F+++ +A+ A EKM+G GRP+ V L
Sbjct: 325 VFEPFGEL---DFVQLQKD-ENGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRPIRVGL 380
Query: 61 ASEKYLEDAAQN 72
++K+ D A N
Sbjct: 381 GNDKFSSDPATN 392
>gi|6754972|ref|NP_035163.1| poly A binding protein, cytoplasmic 2 [Mus musculus]
gi|473092|emb|CAA53572.1| polyA binding protein, testis-enriched isoform [Mus musculus]
gi|29835142|gb|AAH51134.1| Poly(A) binding protein, cytoplasmic 2 [Mus musculus]
gi|148678113|gb|EDL10060.1| poly A binding protein, cytoplasmic 2 [Mus musculus]
Length = 628
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSTKVM--TEG---GRSKGFGFVCFSSPEEATKAVSEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 649
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FSPYG I S + R P GV +G F+ +S EEA A +M+G++ +PL V L
Sbjct: 328 LFSPYGTITSCKVM---RDPS-GVSKGSGFVAFSNPEEASRALSEMNGKMVVSKPLYVAL 383
Query: 61 ASEK 64
A K
Sbjct: 384 AQRK 387
>gi|405122300|gb|AFR97067.1| single-stranded nucleic acid binding protein [Cryptococcus
neoformans var. grubii H99]
Length = 240
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTK 36
+FS YGKI DF++H G +G PRGFAFI++ K
Sbjct: 40 IFSKYGKITKLDFMFHKTGVLKGKPRGFAFIQFLNK 75
>gi|449528821|ref|XP_004171401.1| PREDICTED: uncharacterized LOC101216322 [Cucumis sativus]
Length = 251
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V ++ R + G RGFAF+ Y +EA+ A +K+ GR+ GR ++V+
Sbjct: 35 LFDKYGKVVD---VFIPRDRRTGDSRGFAFVRYKYADEAQKAIDKLDGRMLDGREIMVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|45553910|ref|NP_996326.1| sister-of-Sex-lethal [Drosophila melanogaster]
gi|25012235|gb|AAN71232.1| LD21345p [Drosophila melanogaster]
gi|27819751|gb|AAO24926.1| SD07604p [Drosophila melanogaster]
gi|45446770|gb|AAS65244.1| sister-of-Sex-lethal [Drosophila melanogaster]
gi|220951726|gb|ACL88406.1| CG3056-PB [synthetic construct]
Length = 443
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+FSPYG IV + L R G PRG AF+ Y+ +EEA+ A + ++ + G +P+ V
Sbjct: 198 IFSPYGLIVQRNIL---RDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWV 254
Query: 59 RLASEKYLEDAAQ 71
RLA E AAQ
Sbjct: 255 RLAEEHGKAKAAQ 267
>gi|35903017|ref|NP_919382.1| CUGBP Elav-like family member 2 [Danio rerio]
gi|19909954|dbj|BAB87828.1| elav-type ribonucleoprotein-3 [Danio rerio]
Length = 486
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA---CGRPLV 57
MFSPYG+I L RGP G+ RG AF+ +ST+ A+ A + MH C P+V
Sbjct: 127 MFSPYGQIEECRIL---RGPD-GLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMV 182
Query: 58 VRLASEK 64
V+ A +
Sbjct: 183 VKFADTQ 189
>gi|255077948|ref|XP_002502554.1| predicted protein [Micromonas sp. RCC299]
gi|226517819|gb|ACO63812.1| predicted protein [Micromonas sp. RCC299]
Length = 325
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G +++ + R P G RGF F+ Y + E + A E M+G+ C RP+ V A
Sbjct: 138 FSAFGVVITTPKIM--RDPDTGNSRGFGFVSYDSFEASDAAIEAMNGQFLCNRPISVTYA 195
Query: 62 SEK 64
+K
Sbjct: 196 YKK 198
>gi|148228597|ref|NP_001084196.1| CUGBP Elav-like family member 1-A [Xenopus laevis]
gi|82227733|sp|O57406.1|CEL1A_XENLA RecName: Full=CUGBP Elav-like family member 1-A; Short=CELF-1A;
AltName: Full=Bruno-like protein 2-A; AltName: Full=CUG
triplet repeat RNA-binding protein 1-A; Short=CUG-BP1-A;
AltName: Full=CUG-BP- and ETR-3-like factor 1-A;
AltName: Full=Embryo deadenylation element-binding
protein A; Short=EDEN-BP-A; AltName: Full=RNA-binding
protein BRUNOL-2-A; AltName: Full=p53/p55
gi|2781419|gb|AAC41243.1| embryo deadenylation element binding protein [Xenopus laevis]
gi|80478529|gb|AAI08575.1| CUGBP1 protein [Xenopus laevis]
Length = 489
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMH---GRLACGRPLV 57
MFSP+G+I L RGP G+ RG AF+ ++T+ A++A + MH C P+V
Sbjct: 127 MFSPFGQIEECRIL---RGPD-GMSRGCAFVTFTTRSMAQMAIKSMHQAQTMEGCSSPIV 182
Query: 58 VRLASEK 64
V+ A +
Sbjct: 183 VKFADTQ 189
>gi|303318024|ref|XP_003069014.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108695|gb|EER26869.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320036831|gb|EFW18769.1| RNA splicing factor [Coccidioides posadasii str. Silveira]
Length = 593
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ DF+ + + G RG+ F+++ +A+ A EKM+G GRP+ V L
Sbjct: 323 VFEPFGEL---DFVQLQKD-ENGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRPIRVGL 378
Query: 61 ASEKYLEDAAQN 72
++K+ D A N
Sbjct: 379 GNDKFSSDPATN 390
>gi|356564176|ref|XP_003550332.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 654
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF+ YG I S + R P G+ RG F+ +ST EEA A +M+G++ G+PL V L
Sbjct: 336 MFADYGTITSCKVM---RDPT-GISRGSGFVAFSTPEEATRALGEMNGKMFAGKPLYVAL 391
Query: 61 ASEK 64
A K
Sbjct: 392 AQRK 395
>gi|297841929|ref|XP_002888846.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
gi|297334687|gb|EFH65105.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
Length = 685
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MFS YG + S + +++G + RGF F+ YS+ EEA A +M+G++ +PL V
Sbjct: 360 MFSEYGNVTSCKVMMNSQG----LSRGFGFVAYSSPEEASRALSEMNGKMIGRKPLYVAF 415
Query: 61 ASEK 64
A K
Sbjct: 416 AQRK 419
>gi|268564468|ref|XP_002639117.1| C. briggsae CBR-RNP-6 protein [Caenorhabditis briggsae]
Length = 744
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
F P+G I S + W P G + FAF+EY E A LA+E M+G++ GR L V
Sbjct: 122 FDPFGPIKSINMSWD---PATGHHKTFAFVEYEIPEAALLAQESMNGQMLGGRNLKV 175
>gi|353238006|emb|CCA69965.1| related to splicing factor HCC1 [Piriformospora indica DSM 11827]
Length = 543
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ +F+ R P G +G+ FI+Y E+AK+A E+M G GR L V
Sbjct: 324 VFEPFGEL---EFVDLHRDPATGRSKGYCFIQYRRPEDAKMALEQMDGFELAGRQLRVNT 380
Query: 61 ASEK 64
EK
Sbjct: 381 VHEK 384
>gi|297847300|ref|XP_002891531.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
gi|297337373|gb|EFH67790.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
Length = 669
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + R P GV RG F+ +ST EEA A +M+G++ +PL V LA
Sbjct: 341 FAPFGTITSCKVM---RDPT-GVSRGSGFVAFSTPEEASRAITEMNGKMIVTKPLYVALA 396
Query: 62 SEK 64
K
Sbjct: 397 QRK 399
>gi|195375406|ref|XP_002046492.1| GJ12466 [Drosophila virilis]
gi|194153650|gb|EDW68834.1| GJ12466 [Drosophila virilis]
Length = 645
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGR 54
F+P+G I S + W K +GFAF+EY E A+LA E+M+G L GR
Sbjct: 163 FTPFGPIKSINMSWDPITQKH---KGFAFVEYEIPEGAQLALEQMNGALMGGR 212
>gi|115459296|ref|NP_001053248.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|32490269|emb|CAE05558.1| OSJNBb0116K07.11 [Oryza sativa Japonica Group]
gi|113564819|dbj|BAF15162.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|215695125|dbj|BAG90316.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 659
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS YGKI S + G V +G F+ +ST+EEA A +M+G++ G+PL V
Sbjct: 340 LFSNYGKITSCKIMRDANG----VSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAF 395
Query: 61 ASEK 64
A K
Sbjct: 396 AQRK 399
>gi|18402769|ref|NP_564554.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|334183191|ref|NP_001185184.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|10120431|gb|AAG13056.1|AC011807_15 Putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|13877633|gb|AAK43894.1|AF370517_1 Putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|17978685|gb|AAL47336.1| putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|332194351|gb|AEE32472.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|332194352|gb|AEE32473.1| poly(A) binding protein 8 [Arabidopsis thaliana]
Length = 671
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + R P GV RG F+ +ST EEA A +M+G++ +PL V LA
Sbjct: 347 FAPFGTITSCKVM---RDPS-GVSRGSGFVAFSTPEEATRAITEMNGKMIVTKPLYVALA 402
Query: 62 SEK 64
K
Sbjct: 403 QRK 405
>gi|327271804|ref|XP_003220677.1| PREDICTED: embryonic polyadenylate-binding protein-like [Anolis
carolinensis]
Length = 635
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGTITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|194912401|ref|XP_001982498.1| GG12847 [Drosophila erecta]
gi|190648174|gb|EDV45467.1| GG12847 [Drosophila erecta]
Length = 513
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+FSPYG IV + L R G PRG AF+ Y+ +EEA+ A + ++ + G +P+ V
Sbjct: 206 IFSPYGLIVQRNIL---RDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWV 262
Query: 59 RLASEKYLEDAAQ 71
RLA E AAQ
Sbjct: 263 RLAEEHGKAKAAQ 275
>gi|443921112|gb|ELU40879.1| splicing factor, CC1-like family protein [Rhizoctonia solani AG-1
IA]
Length = 399
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ DF+ R P G +G+ FI+Y E+A++A E+M G GR L V
Sbjct: 189 VFEPFGEL---DFVDLHRDPATGKSKGYCFIQYKRPEDARMALEQMEGFELAGRQLRVNT 245
Query: 61 ASEK 64
+K
Sbjct: 246 VHDK 249
>gi|302664299|ref|XP_003023781.1| hypothetical protein TRV_02070 [Trichophyton verrucosum HKI 0517]
gi|291187796|gb|EFE43163.1| hypothetical protein TRV_02070 [Trichophyton verrucosum HKI 0517]
Length = 592
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ DF+ R + G +G+ F+++ +A+ A EKM+G GRP+ V L
Sbjct: 318 VFEPFGEL---DFVQLQR-EEAGRSKGYGFVQFRDPNQAREALEKMNGFDLAGRPIRVGL 373
Query: 61 ASEKYLEDAAQ 71
++K+ D AQ
Sbjct: 374 GNDKFSHDPAQ 384
>gi|390604396|gb|EIN13787.1| splicing factor CC1-like protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 433
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ +F+ R P G +G+ FI+Y E+AK+A E+M G GR L V
Sbjct: 227 VFEPFGEL---EFVDLHRDPMTGRSKGYCFIQYKRAEDAKMALEQMEGFELAGRTLRVNT 283
Query: 61 ASEK 64
EK
Sbjct: 284 VHEK 287
>gi|334312764|ref|XP_003339775.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
1-like [Monodelphis domestica]
Length = 614
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGVITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|356524836|ref|XP_003531034.1| PREDICTED: uncharacterized protein LOC100778928 [Glycine max]
Length = 267
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V + F+ R + G RGFAF+ Y +EA+ A E++ GR+ GR + V+
Sbjct: 35 LFDKYGKVV-DIFIPKDR--RTGESRGFAFVRYKYADEAQKAVERLDGRMVDGREITVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|218195166|gb|EEC77593.1| hypothetical protein OsI_16552 [Oryza sativa Indica Group]
Length = 659
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS YGKI S + G V +G F+ +ST+EEA A +M+G++ G+PL V
Sbjct: 340 LFSNYGKITSCKIMRDANG----VSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAF 395
Query: 61 ASEK 64
A K
Sbjct: 396 AQRK 399
>gi|242015973|ref|XP_002428613.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
gi|212513276|gb|EEB15875.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
Length = 593
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI D + P+ G +G+ FI + + ++AK A E+++G GRP+ V
Sbjct: 284 IFEPFGKI---DSIQLIMDPETGRSKGYGFITFHSADDAKKALEQLNGFELAGRPMKVGN 340
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
E+ ++ A S E +++G G +G++ K+A
Sbjct: 341 VQER-TDNIAGTSILDTDELDRSGIDLGATGRLQLMYKLA 379
>gi|118100597|ref|XP_417367.2| PREDICTED: embryonic polyadenylate-binding protein-like [Gallus
gallus]
Length = 632
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGTITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|60729622|pir||JC7967 Napor protein - zebra fish
gi|14030309|gb|AAK52851.1|AF321194_1 Napor [Danio rerio]
Length = 441
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA---CGRPLV 57
MFSPYG+I L RGP G+ RG AF+ +ST+ A+ A + MH C P+V
Sbjct: 127 MFSPYGQIEECRIL---RGPD-GLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMV 182
Query: 58 VRLASEK 64
V+ A +
Sbjct: 183 VKFADTQ 189
>gi|296233410|ref|XP_002762001.1| PREDICTED: RNA binding protein fox-1 homolog 2-like [Callithrix
jacchus]
Length = 217
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 130 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 184
Query: 61 ASEKYLEDAAQNSSKAVGE 79
A+ + + + + A GE
Sbjct: 185 ATARVMTNKKMVTPYANGE 203
>gi|148227710|ref|NP_001085351.1| embryonic polyadenylate-binding protein B [Xenopus laevis]
gi|82236619|sp|Q6GR16.1|EPABB_XENLA RecName: Full=Embryonic polyadenylate-binding protein B;
Short=Embryonic poly(A)-binding protein B; Short=ePAB-B;
Short=ePABP-B; AltName: Full=XePABP-B
gi|49257242|gb|AAH71118.1| MGC81363 protein [Xenopus laevis]
Length = 629
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGTITSTKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|119602591|gb|EAW82185.1| fuse-binding protein-interacting repressor, isoform CRA_b [Homo
sapiens]
Length = 171
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGR 54
F+P+G I S D W + K +GFAF+EY E A+LA E+M+ + GR
Sbjct: 106 FAPFGPIKSIDMSWDSVTMKH---KGFAFVEYEVPEAAQLALEQMNSVMLGGR 155
>gi|66269433|gb|AAY43161.1| napor protein isoform [Danio rerio]
Length = 483
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA---CGRPLV 57
MFSPYG+I L RGP G+ RG AF+ +ST+ A+ A + MH C P+V
Sbjct: 173 MFSPYGQIEECRIL---RGPD-GLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMV 228
Query: 58 VRLASEK 64
V+ A +
Sbjct: 229 VKFADTQ 235
>gi|256082940|ref|XP_002577709.1| splicing factor [Schistosoma mansoni]
gi|360043602|emb|CCD81148.1| putative splicing factor [Schistosoma mansoni]
Length = 463
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI ED + P +G+ F+ Y ++AK A ++++G GRP+ V
Sbjct: 222 IFEPFGKI--EDIKL-IKDPTTNRSQGYGFVTYVNSDDAKKALDQLNGFELAGRPMKVNH 278
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ + A S+ EA+++G GT+G++ AK+A
Sbjct: 279 VTER--SEYACLSALDNDEADRSGVDLGTTGRLALMAKLA 316
>gi|66269431|gb|AAY43160.1| napor protein long isoform [Danio rerio]
Length = 493
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA---CGRPLV 57
MFSPYG+I L RGP G+ RG AF+ +ST+ A+ A + MH C P+V
Sbjct: 159 MFSPYGQIEECRIL---RGPD-GLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMV 214
Query: 58 VRLASEK 64
V+ A +
Sbjct: 215 VKFADTQ 221
>gi|226467496|emb|CAX69624.1| Poly U-binding-splicing factor half pint [Schistosoma japonicum]
Length = 411
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
FSP+G I S W T K +GFAF+E+ E A LA E+M+G GR L V
Sbjct: 113 FSPFGPIKSVALSWDTVLQKH---KGFAFVEFEVPEAASLALEQMNGYTLAGRNLKV 166
>gi|356520818|ref|XP_003529057.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
B-like [Glycine max]
Length = 718
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 8 IVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHG 48
++ ED LW P+ G+ FIEY+T +EA+LAKEK HG
Sbjct: 91 VIKEDGLWMPVDPETEKTLGYCFIEYNTPQEAELAKEKTHG 131
>gi|356512057|ref|XP_003524737.1| PREDICTED: uncharacterized protein LOC100804370 [Glycine max]
Length = 267
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V + F+ R + G RGFAF+ Y +EA+ A E++ GR+ GR + V+
Sbjct: 35 LFDKYGKVV-DIFIPKDR--RTGESRGFAFVRYKYADEAQKAVERLDGRMVDGREITVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|356506676|ref|XP_003522102.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
B-like [Glycine max]
Length = 718
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 8 IVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHG 48
++ ED LW P+ G+ FIEY+T +EA+LAKEK HG
Sbjct: 91 VIKEDGLWMPVDPETEKTLGYCFIEYNTPQEAELAKEKTHG 131
>gi|324507842|gb|ADY43315.1| RNA-binding protein 39 [Ascaris suum]
Length = 618
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 1 MFSPYGKI----VSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPL 56
+F P+GKI ++ D GV +G+A++ + ++AK A E+M+G GRP+
Sbjct: 371 IFEPFGKIDTLEIATDL--------SGVSKGYAYVTFRHADDAKRAMEQMNGFELAGRPM 422
Query: 57 VVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
V + Q + EA++ G GTSG+++ AK+A
Sbjct: 423 KVGTVDGDEVPSQPQRTLD-TDEADRRGIDLGTSGRLHLMAKLA 465
>gi|224120444|ref|XP_002318331.1| predicted protein [Populus trichocarpa]
gi|222859004|gb|EEE96551.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F +G++V + L + KR PRGFAF+ Y T+EEA+ A E MHG+ GR + V +A
Sbjct: 110 FQNFGQLVDVN-LVMDKVAKR--PRGFAFLRYETEEEAQKAIEGMHGKFLDGRVIFVEVA 166
Query: 62 SEK 64
+
Sbjct: 167 KPR 169
>gi|19909958|dbj|BAB87830.1| elav-type ribonucleoprotein-3 [Gallus gallus]
Length = 327
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA---CGRPLV 57
MFSP+G+I L RGP G+ RG AF+ +ST+ A+ A + MH C P+V
Sbjct: 32 MFSPFGQIEECRIL---RGPD-GLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIV 87
Query: 58 VRLASEK 64
V+ A +
Sbjct: 88 VKFADTQ 94
>gi|432114066|gb|ELK36113.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 230
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I F+ GP G F F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 113 FSPFGTITGAKFMMEG-GPSEG----FGFVRFSSPEEATKAVTEMNGRIVATKPLCVALA 167
Query: 62 SEK 64
K
Sbjct: 168 QRK 170
>gi|226469236|emb|CAX70097.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 463
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI + + P +G+ F+ Y ++AK A ++++G GRP+ V
Sbjct: 222 IFEPFGKIEDIKLI---KDPATNRSQGYGFVTYVNSDDAKKALDQLNGFELAGRPMKVNH 278
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ + A S+ EA+++G GT+G++ AK+A
Sbjct: 279 VTER--SEYACLSALDNDEADRSGVDLGTTGRLALMAKLA 316
>gi|66269429|gb|AAY43159.1| napor protein short isoform [Danio rerio]
Length = 473
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA---CGRPLV 57
MFSPYG+I L RGP G+ RG AF+ +ST+ A+ A + MH C P+V
Sbjct: 159 MFSPYGQIEECRIL---RGPD-GLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMV 214
Query: 58 VRLASEK 64
V+ A +
Sbjct: 215 VKFADTQ 221
>gi|6456838|emb|CAA04179.2| Sex-lethal orthologous protein [Megaselia scalaris]
Length = 307
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+F YG+IV ++ L R G PRG AFI ++ +EEA+ A ++ + G +PL V
Sbjct: 169 IFGKYGQIVQKNIL---RDKHTGTPRGVAFIRFNKREEAQEAISALNNVIPEGGTQPLTV 225
Query: 59 RLASE 63
R+A E
Sbjct: 226 RVAEE 230
>gi|363745135|ref|XP_423964.3| PREDICTED: poly(U)-binding-splicing factor PUF60-like, partial
[Gallus gallus]
Length = 158
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGR 54
F+P+G I S D W + K +GFAF+EY E A+LA E+M+ + GR
Sbjct: 106 FAPFGPIKSIDMSWDSVTMKH---KGFAFVEYEVPEAAQLALEQMNSVMLGGR 155
>gi|358057442|dbj|GAA96791.1| hypothetical protein E5Q_03462 [Mixia osmundae IAM 14324]
Length = 308
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 1 MFSPYG-KIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVR 59
+F+ G + S + + GP +G RG+ F+ + + + K A EK+H + GRP+ V+
Sbjct: 224 LFTDVGLTVTSSKVIVYNSGPNKGKSRGYGFVHVADEAQQKKAIEKLHDKDIDGRPVQVK 283
Query: 60 LASEKYLEDAAQNSSKAVGEANKT 83
+A +K DA N + GE T
Sbjct: 284 VAVDK---DAQPNGAAEDGEPAST 304
>gi|71897303|ref|NP_001026551.1| poly(U)-binding-splicing factor PUF60 [Gallus gallus]
gi|60098673|emb|CAH65167.1| hypothetical protein RCJMB04_5e8 [Gallus gallus]
Length = 366
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGR 54
F+P+G I S D W + K +GFAF+EY E A+LA E+M+ + GR
Sbjct: 106 FAPFGPIKSIDMSWDSVTMKH---KGFAFVEYEVPEAAQLALEQMNSVMLGGR 155
>gi|31873732|emb|CAD97833.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+I S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 112 IFEPFGRIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 168
Query: 61 ASEKYLEDAAQNSSKAVGEA-NKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS + +TG GT+G++ A++A
Sbjct: 169 VTER--TDASSASSFLDSDGLERTGIDLGTTGRLQLMARLA 207
>gi|17510025|ref|NP_491176.1| Protein RNP-6, isoform b [Caenorhabditis elegans]
gi|373220165|emb|CCD72565.1| Protein RNP-6, isoform b [Caenorhabditis elegans]
Length = 749
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
F P+G I S + W P G + FAF+EY E A LA+E M+G++ GR L V
Sbjct: 122 FDPFGPIKSINMSWD---PATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKV 175
>gi|22329932|ref|NP_174676.2| poly(A) binding protein 1 [Arabidopsis thaliana]
gi|332193555|gb|AEE31676.1| poly(A) binding protein 1 [Arabidopsis thaliana]
Length = 407
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +G I S + H+ G +GV F+E+ST EEA A KM+G++ +P+ V L
Sbjct: 242 LFSEFGTITSCKVMVHSNGISKGV----GFVEFSTSEEASKAMLKMNGKMVGNKPIYVSL 297
Query: 61 ASEK 64
A K
Sbjct: 298 AQCK 301
>gi|209154564|gb|ACI33514.1| RNA-binding protein 39 [Salmo salar]
Length = 525
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI S + + + G +G+ FI +S E AK A ++++G GRP+ V
Sbjct: 268 IFEPFGKIESIQLMMDS---ETGRSKGYGFITFSDTECAKKALDQLNGFELAGRPMKVGH 324
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 325 VTER--TDASTASSFLDSDELERTGIDLGTTGRLQLMARLA 363
>gi|395506976|ref|XP_003757804.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 594
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 299 FSPYGVITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 353
Query: 62 SEK 64
K
Sbjct: 354 QRK 356
>gi|194895040|ref|XP_001978170.1| GG17848 [Drosophila erecta]
gi|190649819|gb|EDV47097.1| GG17848 [Drosophila erecta]
Length = 219
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 6 GKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65
G I D L+H GP G RG+AF+ ++ + A A K+ G R + VRLA
Sbjct: 65 GAIEKFDMLFHKGGPMVGQSRGYAFVTFAQNDGATNALLKLDGTSVGNRSIAVRLAKNIK 124
Query: 66 LEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSS 115
+D + + A T G +++++ I AI+ KLK LE ++
Sbjct: 125 YDDLQKPKPRLEIPALGT---GKREEKISKTEAIRAIEAKLKVLERQTDD 171
>gi|52346030|ref|NP_001005062.1| embryonic polyadenylate-binding protein [Xenopus (Silurana)
tropicalis]
gi|82235830|sp|Q6DEY7.1|EPAB_XENTR RecName: Full=Embryonic polyadenylate-binding protein;
Short=Embryonic poly(A)-binding protein; Short=ePABP
gi|49899948|gb|AAH76956.1| MGC89376 protein [Xenopus (Silurana) tropicalis]
Length = 629
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGTITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|355714554|gb|AES05042.1| poly-U binding splicing factor 60KDa [Mustela putorius furo]
Length = 314
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGR 54
F+P+G I S D W + K +GFAF+EY E A+LA E+M+ + GR
Sbjct: 150 FAPFGPIKSIDMSWDSVTMKH---KGFAFVEYEVPEAAQLALEQMNSVMLGGR 199
>gi|170116604|ref|XP_001889492.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164635494|gb|EDQ99800.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 187
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEA--KLAKEKMHGRLACGRP 55
+FS +GK+ DFL+H G +G PRG+AFIEY +K+ + + RL+C P
Sbjct: 69 VFSKFGKVSKLDFLFHKTGLLKGKPRGYAFIEYGSKDVSVPLPLPPPLPPRLSCVMP 125
>gi|118486179|gb|ABK94932.1| unknown [Populus trichocarpa]
Length = 408
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FSP+G I S + R P G+ RG F+ +ST EEA A +M+G++ +PL V L
Sbjct: 91 LFSPFGTITSCKVM---RDPN-GISRGSGFVAFSTPEEASRALLEMNGKMVASKPLYVAL 146
Query: 61 ASEK 64
A K
Sbjct: 147 AQRK 150
>gi|159164023|pdb|2D9P|A Chain A, Solution Structure Of Rna Binding Domain 4 In
Polyadenylation Binding Protein 3
Length = 103
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 36 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 90
Query: 62 SEK 64
K
Sbjct: 91 QRK 93
>gi|449478880|ref|XP_004155443.1| PREDICTED: uncharacterized protein LOC101223695 [Cucumis sativus]
Length = 283
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V ++ R + G RGFAF+ Y +EA+ A E++ G + GR + V+
Sbjct: 35 LFHKYGKVVD---IFIPRDRRTGDSRGFAFVRYKYADEAQKAVERLDGTMVDGREITVQF 91
Query: 61 ASEKYLEDAAQNSSKAVGEA 80
A KY +A + + EA
Sbjct: 92 A--KYGPNAERIHKGKISEA 109
>gi|357490717|ref|XP_003615646.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|217073250|gb|ACJ84984.1| unknown [Medicago truncatula]
gi|355516981|gb|AES98604.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 267
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V ++ R + G RGFAF+ Y +EA A +++ GR+ GR + V+
Sbjct: 35 LFDKYGKVVD---IFIPRDRRTGESRGFAFVRYKYADEASKAVDRLDGRMVDGREITVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|159163855|pdb|2CQ3|A Chain A, Solution Structure Of Rna Binding Domain In Rna Binding
Motif Protein 9
Length = 103
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 35 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 89
Query: 61 ASEKYLEDAAQNS 73
A+ + + ++ +S
Sbjct: 90 ATARVMTNSGPSS 102
>gi|449445890|ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 654
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F+P+G I S + R P G+ RG F+ +ST +EA A +M+G++ +PL V L
Sbjct: 330 LFAPFGTITSCKVM---RDPN-GISRGSGFVAFSTPDEASRALVEMNGKMVVSKPLYVAL 385
Query: 61 ASEK 64
A K
Sbjct: 386 AQRK 389
>gi|328876647|gb|EGG25010.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 748
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 7 KIVSEDFLWHTRGPKRGV---PRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASE 63
+I+ E+F H G G+ RGFAF+ YST+EEA +A EKM+G + + LVV L++
Sbjct: 450 EIIREEFAKH--GNILGIKIKSRGFAFLTYSTQEEAAVAIEKMNGYVFGTKALVVSLSNS 507
Query: 64 K 64
+
Sbjct: 508 R 508
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
FS YG I+S + ++G+ +G+ ++ + +E ++ A K++G + G+P++V
Sbjct: 240 FSTYGNILSCKIEY-----EKGISKGYGYVHFENQESSEQAILKVNGTILLGKPIIV 291
>gi|168064593|ref|XP_001784245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664211|gb|EDQ50939.1| predicted protein [Physcomitrella patens subsp. patens]
gi|448878415|gb|AGE46170.1| arginine/serine-rich splicing factor SC37 transcript I
[Physcomitrella patens subsp. patens]
gi|448878417|gb|AGE46171.1| arginine/serine-rich splicing factor SC37 transcript II
[Physcomitrella patens subsp. patens]
Length = 319
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V ++ R + G RGFAF+ Y +EA+ A E++ GR GR +VV+
Sbjct: 35 LFDRYGKVVD---IFIPRDRRTGESRGFAFVRYKYADEAQKAIERLDGREVDGRHIVVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|448878409|gb|AGE46167.1| arginine/serine-rich splicing factor SC39 transcript I
[Physcomitrella patens subsp. patens]
Length = 340
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V ++ R + G RGFAF+ Y +EA+ A E++ GR GR +VV+
Sbjct: 35 LFDRYGKVVD---IFIPRDRRTGESRGFAFVRYKYSDEAQKAIERLDGRAVDGRNIVVQS 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +GKI S + + GV +G F+ +ST+EEA A +M+G++ G+PL V
Sbjct: 423 LFSNFGKITSCKIMRD----QNGVSKGSGFVSFSTREEASQALTEMNGKMISGKPLYVAF 478
Query: 61 ASEK 64
A K
Sbjct: 479 AQRK 482
>gi|30179878|sp|O01671.3|SXL_MEGSC RecName: Full=Sex-lethal homolog
gi|9743624|emb|CAC01696.1| sex-lethal homologue [Megaselia scalaris]
Length = 321
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+F YG+IV ++ L R G PRG AFI ++ +EEA+ A ++ + G +PL V
Sbjct: 183 IFGKYGQIVQKNIL---RDKHTGTPRGVAFIRFNKREEAQEAISALNNVIPEGGTQPLTV 239
Query: 59 RLASE 63
R+A E
Sbjct: 240 RVAEE 244
>gi|395829049|ref|XP_003787673.1| PREDICTED: polyadenylate-binding protein 1-like [Otolemur
garnettii]
Length = 611
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGMITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
+FS +GK++S + + G RG F F+ + T EEA+ A M+G+ GR L V
Sbjct: 210 LFSQFGKMLSVKVMRDSSGHSRG----FGFVNFETHEEAQKAVVHMNGKEVSGRLLYV 263
>gi|449494871|ref|XP_004159670.1| PREDICTED: cold-inducible RNA-binding protein B-like [Cucumis
sativus]
Length = 95
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FSP+G I + R PK P+GF F+ + + EAK A + M GR+ GR + V
Sbjct: 26 LFSPFGSISEARLI---RDPKTERPKGFGFVTFQSPAEAKKALKAMDGRIVDGRLIFVEF 82
Query: 61 A-SEKY 65
A +EK+
Sbjct: 83 AKTEKH 88
>gi|297804178|ref|XP_002869973.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315809|gb|EFH46232.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 788
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 8/65 (12%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPR--GFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
+FSP+G+I S R PKR + + GFAF+E+ TK+EA AK+ + GR LV+
Sbjct: 692 LFSPFGQIKS------MRLPKRNIEQYAGFAFVEFVTKQEALNAKKALSSTHFYGRHLVL 745
Query: 59 RLASE 63
A++
Sbjct: 746 EWAND 750
Score = 35.0 bits (79), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 6 GKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65
GKI+S + H + K + RG+ F+E+ + E A + G + G L++R K
Sbjct: 600 GKILSVKIIKHVKNGK-NLSRGYGFVEFDSVETATNVYRDLQGTVLDGHALILRFCENKR 658
Query: 66 LEDAAQNSSK 75
+ A ++S K
Sbjct: 659 SDKAGKDSGK 668
>gi|296820488|ref|XP_002849949.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
gi|238837503|gb|EEQ27165.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
Length = 595
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ DF+ R + G +G+ F+++ +A+ A EKM+G GRP+ V L
Sbjct: 321 VFEPFGEL---DFVQLQRE-EAGRSKGYGFVQFRDPNQAREALEKMNGFDLAGRPIRVGL 376
Query: 61 ASEKYLEDAAQ 71
++K+ D AQ
Sbjct: 377 GNDKFSHDPAQ 387
>gi|302499164|ref|XP_003011578.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
gi|291175130|gb|EFE30938.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
Length = 594
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ DF+ R + G +G+ F+++ +A+ A EKM+G GRP+ V L
Sbjct: 320 VFEPFGEL---DFVQLQRE-EAGRSKGYGFVQFRDPNQAREALEKMNGFDLAGRPIRVGL 375
Query: 61 ASEKYLEDAAQ 71
++K+ D AQ
Sbjct: 376 GNDKFSHDPAQ 386
>gi|449438193|ref|XP_004136874.1| PREDICTED: uncharacterized protein LOC101219227 [Cucumis sativus]
Length = 283
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V ++ R + G RGFAF+ Y +EA+ A E++ G + GR + V+
Sbjct: 35 LFHKYGKVVD---IFIPRDRRTGDSRGFAFVRYKYADEAQKAVERLDGTMVDGREITVQF 91
Query: 61 ASEKYLEDAAQNSSKAVGEA 80
A KY +A + + EA
Sbjct: 92 A--KYGPNAERIHKGKISEA 109
>gi|156398787|ref|XP_001638369.1| predicted protein [Nematostella vectensis]
gi|156225489|gb|EDO46306.1| predicted protein [Nematostella vectensis]
Length = 504
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGR 54
F P+G I D W K +GFAF+EY E A+LA E+M+G L GR
Sbjct: 84 FHPFGPINKIDLSWDPLNMKH---KGFAFVEYDLPEAAQLALEQMNGVLLGGR 133
>gi|403412344|emb|CCL99044.1| predicted protein [Fibroporia radiculosa]
Length = 599
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ +F+ R P G +G+AF++Y E+A++A E+M G GR L V
Sbjct: 392 VFEPFGEL---EFVDLHRDPMTGRSKGYAFVQYKRAEDARMALEQMEGFELAGRTLRVNT 448
Query: 61 ASEKYLEDAAQNSS 74
EK AQ S
Sbjct: 449 VHEKGTTKYAQQDS 462
>gi|344236628|gb|EGV92731.1| Poly(U)-binding-splicing factor PUF60 [Cricetulus griseus]
Length = 271
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGR 54
F+P+G I S D W + K +GFAF+EY E A+LA E+M+ + GR
Sbjct: 89 FAPFGPIKSIDMSWDSVTMKH---KGFAFVEYEVPEAAQLALEQMNSVMLGGR 138
>gi|6019464|gb|AAC64372.2| polyadenylate-binding protein 1 [Leishmania major]
Length = 560
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YG++ S + + GV RGF F+ +S +EA A +M+GR+ G+PL+V +
Sbjct: 326 LFKEYGEVKSCRVMV----SESGVSRGFGFVSFSNADEANAALREMNGRMLNGKPLIVNI 381
Query: 61 ASEK 64
A +
Sbjct: 382 AQRR 385
>gi|255642028|gb|ACU21281.1| unknown [Glycine max]
Length = 254
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V + F+ R + G RGFAF+ Y +EA+ A E++ GR+ GR + V+
Sbjct: 35 LFDKYGKVV-DIFIPKDR--RTGESRGFAFVRYKYADEAQKAVERLDGRMVDGREITVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|401409932|ref|XP_003884414.1| putative splicing factor [Neospora caninum Liverpool]
gi|325118832|emb|CBZ54384.1| putative splicing factor [Neospora caninum Liverpool]
Length = 550
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G I++ + R P+ G+ RGF F+ + T E + A M+G+ C RP+ V A
Sbjct: 136 FSTFGNILTAKIM---RDPETGISRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYA 192
Query: 62 SEK 64
+K
Sbjct: 193 YKK 195
>gi|315043566|ref|XP_003171159.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
gi|311344948|gb|EFR04151.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
Length = 589
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ DF+ R + G +G+ F+++ +A+ A EKM+G GRP+ V L
Sbjct: 315 VFEPFGEL---DFVQLQRE-EAGRSKGYGFVQFRDPNQAREALEKMNGFDLAGRPIRVGL 370
Query: 61 ASEKYLEDAAQ 71
++K+ D AQ
Sbjct: 371 GNDKFSHDPAQ 381
>gi|357475273|ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
gi|355508977|gb|AES90119.1| Poly(A)-binding protein [Medicago truncatula]
Length = 654
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS YG I S + R P GV RG F+ +ST EEA A +M+G++ +PL V L
Sbjct: 335 LFSSYGTITSCKVM---RDPN-GVSRGSGFVAFSTPEEASRALLEMNGKMVASKPLYVTL 390
Query: 61 ASEK 64
A K
Sbjct: 391 AQRK 394
>gi|432865704|ref|XP_004070572.1| PREDICTED: embryonic polyadenylate-binding protein-like [Oryzias
latipes]
Length = 624
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGTITSAKVM-----TEAGQSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
+
Sbjct: 369 QRR 371
>gi|225459316|ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243776 [Vitis vinifera]
gi|302141951|emb|CBI19154.3| unnamed protein product [Vitis vinifera]
Length = 257
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V ++ R + G RGFAF+ Y +EA+ A EK+ GR GR ++V+
Sbjct: 35 LFDKYGKVVD---VFIPRDRRTGDSRGFAFVRYKYADEAQKAVEKLDGRNVDGREIMVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|225423629|ref|XP_002274983.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|359473083|ref|XP_003631246.1| PREDICTED: glycine-rich RNA-binding protein 2-like [Vitis vinifera]
gi|297738010|emb|CBI27211.3| unnamed protein product [Vitis vinifera]
gi|297738011|emb|CBI27212.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G+IV D + + KR PRG+AFI+Y++++ A LA E M + GR + V LA
Sbjct: 58 FSKFGQIVEVDVV-KDKAAKR--PRGYAFIQYTSQDHAMLALENMDHKYLDGRVVCVELA 114
>gi|326471726|gb|EGD95735.1| RNA splicing factor [Trichophyton tonsurans CBS 112818]
Length = 592
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ DF+ R + G +G+ F+++ +A+ A EKM+G GRP+ V L
Sbjct: 318 VFEPFGEL---DFVQLQRE-EAGRSKGYGFVQFRDPNQAREALEKMNGFDLAGRPIRVGL 373
Query: 61 ASEKYLEDAAQ 71
++K+ D AQ
Sbjct: 374 GNDKFSHDPAQ 384
>gi|431894424|gb|ELK04224.1| Polyadenylate-binding protein 1-like protein [Pteropus alecto]
Length = 512
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 321 FSPYGMITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 375
Query: 62 SEK 64
K
Sbjct: 376 QRK 378
>gi|194672643|ref|XP_882298.3| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 19
[Bos taurus]
gi|297482024|ref|XP_002692514.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Bos taurus]
gi|296480945|tpg|DAA23060.1| TPA: polyadenylate-binding protein 1-like [Bos taurus]
Length = 613
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGVITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +GK++S + G RG F F+ + EEA+ A M+GR GR L V
Sbjct: 210 LFSQFGKMLSVKVMRDDSGHSRG----FGFVNFEKHEEAQKAVVNMNGREVSGRLLYVGR 265
Query: 61 ASEK 64
A ++
Sbjct: 266 AQKR 269
>gi|326485177|gb|EGE09187.1| RNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 560
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ DF+ R + G +G+ F+++ +A+ A EKM+G GRP+ V L
Sbjct: 286 VFEPFGEL---DFVQLQRE-EAGRSKGYGFVQFRDPNQAREALEKMNGFDLAGRPIRVGL 341
Query: 61 ASEKYLEDAAQ 71
++K+ D AQ
Sbjct: 342 GNDKFSHDPAQ 352
>gi|302765723|ref|XP_002966282.1| hypothetical protein SELMODRAFT_7952 [Selaginella moellendorffii]
gi|302793049|ref|XP_002978290.1| hypothetical protein SELMODRAFT_7949 [Selaginella moellendorffii]
gi|300154311|gb|EFJ20947.1| hypothetical protein SELMODRAFT_7949 [Selaginella moellendorffii]
gi|300165702|gb|EFJ32309.1| hypothetical protein SELMODRAFT_7952 [Selaginella moellendorffii]
Length = 92
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V ++ R + G RGFAF+ Y +EA+ A E++ G+ GR +VV+
Sbjct: 27 LFDRYGKVVD---IFIPRDRRTGDSRGFAFVRYKHADEAQKAIERLDGKNVDGRNIVVQF 83
Query: 61 A 61
A
Sbjct: 84 A 84
>gi|449505035|ref|XP_004162358.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Cucumis sativus]
Length = 826
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGP-KRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVR 59
+FSPYG+I S R P K G RGFAF+E+ TK+EA+ A + + GR LV+
Sbjct: 725 LFSPYGQIKS------LRLPMKFGKHRGFAFVEFVTKQEAQNAFQALSNTHLYGRHLVLE 778
Query: 60 LASE 63
A E
Sbjct: 779 RAKE 782
>gi|2665654|gb|AAB88449.1| polyadenylate binding protein [Petromyzon marinus]
Length = 630
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + + G RGF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 315 FSPFGTITSAKVMM-----EEGRSRGFGFVCFSSPEEATKAVTEMNGRIIGSKPLYVALA 369
Query: 62 SEK 64
K
Sbjct: 370 QRK 372
>gi|119596296|gb|EAW75890.1| hCG2019100, isoform CRA_d [Homo sapiens]
Length = 639
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGVITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|398407631|ref|XP_003855281.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
gi|339475165|gb|EGP90257.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
Length = 598
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ +F+ + G +G+ F++++ +EAK+A EKM+G GRP+ V L
Sbjct: 330 VFEPFGEL---EFV-QLQKEDTGRSKGYGFVQFAKSDEAKIALEKMNGFEVAGRPIRVGL 385
Query: 61 ASEKY 65
S+K+
Sbjct: 386 GSDKF 390
>gi|449464088|ref|XP_004149761.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
domain-containing protein 1-like [Cucumis sativus]
Length = 823
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGP-KRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVR 59
+FSPYG+I S R P K G RGFAF+E+ TK+EA+ A + + GR LV+
Sbjct: 722 LFSPYGQIKS------LRLPMKFGKHRGFAFVEFVTKQEAQNAFQALSNTHLYGRHLVLE 775
Query: 60 LASE 63
A E
Sbjct: 776 RAKE 779
>gi|25141353|ref|NP_740829.1| Protein RNP-6, isoform c [Caenorhabditis elegans]
gi|373220166|emb|CCD72566.1| Protein RNP-6, isoform c [Caenorhabditis elegans]
Length = 346
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
F P+G I S + W P G + FAF+EY E A LA+E M+G++ GR L V
Sbjct: 122 FDPFGPIKSINMSWD---PATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKV 175
>gi|426242065|ref|XP_004014898.1| PREDICTED: polyadenylate-binding protein 1-like [Ovis aries]
Length = 611
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGVITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +GK++S + G RG F F+ + EEA+ A M+GR GR L V
Sbjct: 210 LFSQFGKMLSVKVMRDDSGHSRG----FGFVNFEKHEEAQKAVVNMNGREVSGRLLYVGR 265
Query: 61 ASEK 64
A ++
Sbjct: 266 AQKR 269
>gi|225464267|ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
gi|296088019|emb|CBI35302.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 25 PRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64
PRGFAF+ YST+EE++ A E MHG+ GR + V +A +
Sbjct: 119 PRGFAFLRYSTEEESEKAIEGMHGKFLDGRVIFVEVAKPR 158
>gi|357164563|ref|XP_003580095.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 661
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +GKI S + + GV +G F+ +ST+EEA A +M+G++ G+PL V
Sbjct: 338 LFSTFGKITSCKVMRD----QNGVSKGSGFVAFSTREEASQAITEMNGKMLSGKPLYVAF 393
Query: 61 ASEK 64
A K
Sbjct: 394 AQRK 397
>gi|50547639|ref|XP_501289.1| YALI0C00539p [Yarrowia lipolytica]
gi|74689742|sp|Q6CDH3.1|PABP_YARLI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49647156|emb|CAG81584.1| YALI0C00539p [Yarrowia lipolytica CLIB122]
Length = 629
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + G +G F F+ YS+ EEA A +M+ RL G+PL V LA
Sbjct: 350 FAPHGTITSAKVMVDEAGKSKG----FGFVCYSSPEEATKAVTEMNHRLVAGKPLYVVLA 405
Query: 62 SEK 64
K
Sbjct: 406 QRK 408
>gi|195043704|ref|XP_001991672.1| GH11936 [Drosophila grimshawi]
gi|193901430|gb|EDW00297.1| GH11936 [Drosophila grimshawi]
Length = 166
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 6 GKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65
G I D L+H GP G RG+AF+ ++ E A A K+ G R + VRLA
Sbjct: 5 GAIDKFDMLFHKGGPMVGQSRGYAFVTFAQNEGATNALMKLDGTHVGSRSIAVRLAKNIK 64
Query: 66 LEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSS 115
+D + + E G G +++++ I AI+ KLK LE ++
Sbjct: 65 YDDLQRPKPRI--EIPALG-SGKREEKISKAEAIRAIEAKLKTLERQTDD 111
>gi|156360993|ref|XP_001625306.1| predicted protein [Nematostella vectensis]
gi|156212133|gb|EDO33206.1| predicted protein [Nematostella vectensis]
Length = 584
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + +G +G F F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 317 FSPYGTISSAKVMKDDKGNSKG----FGFVCFSSPEEATKAVTEMNGRILISKPLYVALA 372
Query: 62 S---EKYLEDAAQNSSKAVG 78
E+ + AAQ+ + G
Sbjct: 373 QRREERKAQLAAQHMHRISG 392
>gi|237833723|ref|XP_002366159.1| polyadenylate-binding protein, putative [Toxoplasma gondii ME49]
gi|211963823|gb|EEA99018.1| polyadenylate-binding protein, putative [Toxoplasma gondii ME49]
Length = 768
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G I S + +RGV R F F+ + + EEA A +MH +L G+PL V L
Sbjct: 407 LFEPFGSITSAKVMRD----ERGVSRCFGFVCFMSPEEATKAVTEMHLKLVKGKPLYVGL 462
Query: 61 ASEK 64
A +
Sbjct: 463 AERR 466
>gi|195155759|ref|XP_002018768.1| GL25979 [Drosophila persimilis]
gi|194114921|gb|EDW36964.1| GL25979 [Drosophila persimilis]
Length = 289
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI + + T + +G+ FI Y E+AK A E+++G GRP+ V
Sbjct: 48 IFEPFGKIDAIQLIMDTETNRS---KGYGFITYHNAEDAKKALEQLNGFELAGRPMKVGN 104
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ +S E ++TG G +G++ K+A
Sbjct: 105 VTERL---DMNTTSLDTDEMDRTGIDLGATGRLQLMFKLA 141
>gi|114682135|ref|XP_514668.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 2
[Pan troglodytes]
gi|397511247|ref|XP_003825989.1| PREDICTED: polyadenylate-binding protein 1-like [Pan paniscus]
Length = 614
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGVITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|356499763|ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 646
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FSP+G I S + R P G+ RG F+ +ST +EA A +M+G++ +PL V L
Sbjct: 329 LFSPFGTITSCKVM---RDPN-GISRGSGFVAFSTPDEASRALLEMNGKMVVSKPLYVTL 384
Query: 61 ASEK 64
A K
Sbjct: 385 AQRK 388
>gi|335310331|ref|XP_003361983.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Sus
scrofa]
Length = 362
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGR 54
F+P+G I S D W + K +GFAF+EY E A+LA E+M+ + GR
Sbjct: 33 FAPFGPIKSIDMSWDSVTMKH---KGFAFVEYEVPEAAQLALEQMNSVMLGGR 82
>gi|111185612|gb|AAI19438.1| Puf60 protein [Mus musculus]
gi|152060991|gb|AAI48275.1| Puf60 protein [Mus musculus]
Length = 241
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGR 54
F+P+G I S D W + K +GFAF+EY E A+LA E+M+ + GR
Sbjct: 63 FAPFGPIKSIDMSWDSVTMKH---KGFAFVEYEVPEAAQLALEQMNSVMLGGR 112
>gi|281354508|gb|EFB30092.1| hypothetical protein PANDA_021625 [Ailuropoda melanoleuca]
Length = 212
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 47 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 101
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 102 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 140
Query: 121 QADNSSCNGSLNCLSGKDGLNN 142
QAD S N + LSG+ G+N
Sbjct: 141 QADVSLGNDAAVPLSGRGGINT 162
>gi|119596295|gb|EAW75889.1| hCG2019100, isoform CRA_c [Homo sapiens]
Length = 433
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGVITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|17510027|ref|NP_491177.1| Protein RNP-6, isoform a [Caenorhabditis elegans]
gi|373220164|emb|CCD72564.1| Protein RNP-6, isoform a [Caenorhabditis elegans]
Length = 339
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
F P+G I S + W P G + FAF+EY E A LA+E M+G++ GR L V
Sbjct: 122 FDPFGPIKSINMSWD---PATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKV 175
>gi|430811846|emb|CCJ30702.1| unnamed protein product [Pneumocystis jirovecii]
Length = 486
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ +F+ + P G RG+ F++Y +A+ A EKM+G GR + V L
Sbjct: 245 IFEPFGEL---EFVQLQKEPDTGRSRGYGFVQYRDPAQARDALEKMNGFELAGRAIRVGL 301
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNR 95
++K+ + S+ AV A +GF G NR
Sbjct: 302 GNDKFTPE----STSAVL-ARFSGFTGSAFENKNR 331
>gi|321472566|gb|EFX83536.1| hypothetical protein DAPPUDRAFT_194972 [Daphnia pulex]
Length = 366
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI + T + G +G+ FI + E+AK A E+++G GRP+ +
Sbjct: 129 IFEPFGKIEHMQLMIDT---ETGRSKGYGFITFRNAEDAKKAMEQLNGFELAGRPMKINH 185
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
+E + + S E ++ G G +G++ AK+A
Sbjct: 186 VTEHFTGNHTYLDSD---EMDRAGIDLGATGRLQLMAKLA 222
>gi|448878419|gb|AGE46172.1| arginine/serine-rich splicing factor SC37 transcript III
[Physcomitrella patens subsp. patens]
Length = 257
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V ++ R + G RGFAF+ Y +EA+ A E++ GR GR +VV+
Sbjct: 35 LFDRYGKVVD---IFIPRDRRTGESRGFAFVRYKYADEAQKAIERLDGREVDGRHIVVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|170575391|ref|XP_001893221.1| splicing factor, CC1-like family protein [Brugia malayi]
gi|158600898|gb|EDP37951.1| splicing factor, CC1-like family protein [Brugia malayi]
Length = 640
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 12/133 (9%)
Query: 1 MFSPYGKI----VSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPL 56
+F P+GKI ++ D GV +G+A++ + ++ K A E+M+G GRP+
Sbjct: 388 IFDPFGKIENLEIATDL--------SGVSKGYAYVTFRHADDGKRAMEQMNGFELAGRPM 439
Query: 57 VVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSA 116
V + + +A++ G GTSG+++ AK+A + A
Sbjct: 440 KVCSVEGDEMPPPVPQRTLDTDDADRRGIDLGTSGRLHLMAKLAEGSGLELPKSAKEILA 499
Query: 117 KKQKQADNSSCNG 129
+ Q+Q ++++ G
Sbjct: 500 QNQQQLESATVTG 512
>gi|355563109|gb|EHH19671.1| Polyadenylate-binding protein 1-like protein [Macaca mulatta]
Length = 614
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGVITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|302565150|ref|NP_001181379.1| polyadenylate-binding protein 1-like [Macaca mulatta]
Length = 614
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGVITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +GKI S + + GV +G F+ +ST+EEA A +M+G++ G+PL V
Sbjct: 423 LFSNFGKITSCKIMRD----QNGVSKGSGFVSFSTREEASQALTEMNGKMISGKPLYVAF 478
Query: 61 ASEK 64
A K
Sbjct: 479 AQRK 482
>gi|196008415|ref|XP_002114073.1| hypothetical protein TRIADDRAFT_27786 [Trichoplax adhaerens]
gi|190583092|gb|EDV23163.1| hypothetical protein TRIADDRAFT_27786 [Trichoplax adhaerens]
Length = 622
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+ +G I S + ++G+ RGF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 323 FANFGTITSAKVM----SDEKGISRGFGFVCFSSPEEATKAVTEMNGRIIISKPLYVALA 378
Query: 62 SEK 64
K
Sbjct: 379 QRK 381
>gi|119596297|gb|EAW75891.1| hCG2019100, isoform CRA_e [Homo sapiens]
Length = 617
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGVITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|401409876|ref|XP_003884386.1| hypothetical protein NCLIV_047860 [Neospora caninum Liverpool]
gi|325118804|emb|CBZ54355.1| hypothetical protein NCLIV_047860 [Neospora caninum Liverpool]
Length = 763
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G I S + +RGV R F F+ + + EEA A +MH +L G+PL V L
Sbjct: 408 LFEPFGSITSAKVMRD----ERGVSRCFGFVCFMSPEEATKAVTEMHLKLVKGKPLYVGL 463
Query: 61 ASEK 64
A +
Sbjct: 464 AERR 467
>gi|297707183|ref|XP_002830392.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Pongo
abelii]
Length = 614
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGVITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|402882426|ref|XP_003904744.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 614
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGVITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|448123237|ref|XP_004204643.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|448125519|ref|XP_004205201.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358249834|emb|CCE72900.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358350182|emb|CCE73461.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
Length = 505
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YG++VS H P P+GF +IE+ST +EAK A E ++G GRP +
Sbjct: 412 IFGEYGRVVSCRMPTH---PDTQQPKGFGYIEFSTVDEAKAALEALNGEYVEGRPCRLDF 468
Query: 61 ASEK 64
++ +
Sbjct: 469 STPR 472
>gi|357628251|gb|EHJ77641.1| poly A binding protein [Danaus plexippus]
Length = 601
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 15/97 (15%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 307 FAPFGTITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 361
Query: 62 SEK----------YLEDAAQNSSKAVGEANKTGFVGG 88
K Y++ A + +G+ + G GG
Sbjct: 362 QRKEDRKAHLTSQYMQRMASMRMQQMGQIFQPGSAGG 398
>gi|169404577|pdb|2QFJ|A Chain A, Crystal Structure Of First Two Rrm Domains Of Fir Bound
To Ssdna From A Portion Of Fuse
gi|169404578|pdb|2QFJ|B Chain B, Crystal Structure Of First Two Rrm Domains Of Fir Bound
To Ssdna From A Portion Of Fuse
Length = 216
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGR 54
F+P+G I S D W + K +GFAF+EY E A+LA E+M+ + GR
Sbjct: 49 FAPFGPIKSIDMSWDSVTMKH---KGFAFVEYEVPEAAQLALEQMNSVMLGGR 98
>gi|19526272|gb|AAL89666.1|AF411956_7 polyA-binding protein [Takifugu rubripes]
Length = 623
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVML-----EEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|449435011|ref|XP_004135289.1| PREDICTED: cold-inducible RNA-binding protein B-like isoform 1
[Cucumis sativus]
gi|449435013|ref|XP_004135290.1| PREDICTED: cold-inducible RNA-binding protein B-like isoform 2
[Cucumis sativus]
Length = 89
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FSP+G I + R PK P+GF F+ + + EAK A + M GR+ GR + V
Sbjct: 26 LFSPFGSISEARLI---RDPKTERPKGFGFVTFQSPAEAKKALKAMDGRIVDGRLIFVEF 82
Query: 61 A 61
A
Sbjct: 83 A 83
>gi|444726222|gb|ELW66761.1| Polyadenylate-binding protein 1-like protein [Tupaia chinensis]
Length = 568
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 289 FSPYGVITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 343
Query: 62 SEK 64
K
Sbjct: 344 QRK 346
>gi|357465579|ref|XP_003603074.1| Poly(A)-binding protein [Medicago truncatula]
gi|355492122|gb|AES73325.1| Poly(A)-binding protein [Medicago truncatula]
Length = 622
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +G + S L R P+ G+ RG F+ +ST EEA A +M+G++ G+PL V
Sbjct: 325 LFSEFGTVTSCKIL---RDPQ-GISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAP 380
Query: 61 ASEK 64
A +K
Sbjct: 381 AQKK 384
>gi|194763555|ref|XP_001963898.1| GF21012 [Drosophila ananassae]
gi|190618823|gb|EDV34347.1| GF21012 [Drosophila ananassae]
Length = 757
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+FS +G+IV + L R G PRG AF+ Y+ +EEA+ A + ++ + G +P+ V
Sbjct: 213 IFSAFGQIVQRNIL---RDKLTGRPRGVAFVRYNKREEAQEAIKTLNNTVPEGGSQPIWV 269
Query: 59 RLASEKYLEDAAQ 71
RLA E AAQ
Sbjct: 270 RLAEEHGKAKAAQ 282
>gi|6685536|sp|P56821.1|EIF3B_TOBAC RecName: Full=Eukaryotic translation initiation factor 3 subunit B;
Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3
p110
gi|5911685|emb|CAA72721.1| PRT1 protein [Nicotiana tabacum]
Length = 719
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHG 48
++S G ++ ED LW P+ G+ FIEY+T +EA+L+KEK HG
Sbjct: 85 IYSQLG-VIKEDGLWMPVDPETHKTLGYCFIEYNTPQEAELSKEKTHG 131
>gi|449501704|ref|XP_004161443.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
2-like [Cucumis sativus]
Length = 576
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F+P+G I S + R P G+ RG F+ +ST +EA A +M+G++ +PL V L
Sbjct: 252 LFAPFGTITSCKVM---RDPN-GISRGSGFVAFSTPDEASRALVEMNGKMVVSKPLYVAL 307
Query: 61 ASEK 64
A K
Sbjct: 308 AQRK 311
>gi|387196968|gb|AFJ68786.1| elav-like protein 2, partial [Nannochloropsis gaditana CCMP526]
Length = 358
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+F+P+G+I+ L G RG AF++Y+T++EA A +H G RPL+V
Sbjct: 221 LFAPHGRIIECRLLMEA---NSGRFRGIAFVQYNTRQEAAAAIRSLHDTPMEGVPRPLIV 277
Query: 59 RLASEK 64
+LA +K
Sbjct: 278 KLADDK 283
>gi|403366460|gb|EJY83033.1| La-related protein 7 [Oxytricha trifallax]
Length = 500
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA 51
+F GKI++ + R PK G+P+GFAF+EYS+ EEA+ A E + ++
Sbjct: 240 IFKRAGKIIN---VQMPRYPKSGLPKGFAFVEYSSPEEAQHAVEMFNNKIV 287
>gi|403345740|gb|EJY72251.1| La-related protein 7 [Oxytricha trifallax]
Length = 489
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA 51
+F GKI++ + R PK G+P+GFAF+EYS+ EEA+ A E + ++
Sbjct: 240 IFKRAGKIIN---VQMPRYPKSGLPKGFAFVEYSSPEEAQHAVEMFNNKIV 287
>gi|348517413|ref|XP_003446228.1| PREDICTED: polyadenylate-binding protein 4 [Oreochromis niloticus]
Length = 627
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVML-----EEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|217074874|gb|ACJ85797.1| unknown [Medicago truncatula]
Length = 494
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +G + S L R P+ G+ RG F+ +ST EEA A +M+G++ G+PL V
Sbjct: 325 LFSEFGTVTSCKIL---RDPQ-GISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAP 380
Query: 61 ASEK 64
A +K
Sbjct: 381 AQKK 384
>gi|426391820|ref|XP_004062264.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Gorilla
gorilla gorilla]
Length = 614
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGVITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|410953832|ref|XP_003983574.1| PREDICTED: polyadenylate-binding protein 1-like [Felis catus]
Length = 616
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGVITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|301763992|ref|XP_002917400.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 611
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGVITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|168015818|ref|XP_001760447.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688461|gb|EDQ74838.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 259
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V ++ R + G RGFAF+ Y +EA+ A E++ GR GR +VV+
Sbjct: 35 LFDRYGKVVD---IFIPRDRRTGESRGFAFVRYKYADEAQKAIERLDGRTVDGRNIVVQS 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|185135971|ref|NP_001118228.1| polyadenylate-binding protein 1-like [Homo sapiens]
gi|74754038|sp|Q4VXU2.1|PAP1L_HUMAN RecName: Full=Polyadenylate-binding protein 1-like
gi|119596298|gb|EAW75892.1| hCG2019100, isoform CRA_f [Homo sapiens]
Length = 614
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGVITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|126649325|ref|XP_001388334.1| poly(a)-binding protein fabm [Cryptosporidium parvum Iowa II]
gi|32398879|emb|CAD98589.1| putative poly(a)-binding protein fabm, possible [Cryptosporidium
parvum]
gi|126117428|gb|EAZ51528.1| poly(a)-binding protein fabm, putative [Cryptosporidium parvum Iowa
II]
Length = 746
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF P+G + S + + GV RGF F+ + + +EA A +MH +L G+PL V L
Sbjct: 382 MFEPFGTVSSVSI----KTDESGVSRGFGFVSFLSPDEATKAITEMHLKLVRGKPLYVGL 437
Query: 61 ASEK 64
K
Sbjct: 438 HERK 441
>gi|281345572|gb|EFB21156.1| hypothetical protein PANDA_005635 [Ailuropoda melanoleuca]
Length = 605
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGVITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|406602740|emb|CCH45698.1| Nuclear localization sequence-binding protein [Wickerhamomyces
ciferrii]
Length = 467
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS YG IVS H P P+GF +++Y + +EAK A E ++G GRP+ +
Sbjct: 357 VFSEYGSIVSVRIPTH---PDTEQPKGFGYVQYGSVDEAKAALEALNGEYIEGRPVRLDF 413
Query: 61 ASEKYLEDAAQNSSKAVG 78
++ + NS+++ G
Sbjct: 414 SAPR------DNSNRSFG 425
>gi|320581887|gb|EFW96106.1| multiple RNA-binding domain-containing protein 1 [Ogataea
parapolymorpha DL-1]
Length = 824
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 8/63 (12%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKR--GVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
+FSP+G + S R PK+ RGFAF+E+ST +EA+ A +++ G GR LV+
Sbjct: 720 LFSPFGNLKS------VRVPKKFDKSARGFAFVEFSTLKEAESAMDQLQGVHLLGRRLVM 773
Query: 59 RLA 61
A
Sbjct: 774 DFA 776
>gi|19909956|dbj|BAB87829.1| bruno-like RNA binding protein [Gallus gallus]
Length = 328
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMH---GRLACGRPLV 57
MFSP+G+I L RGP G+ RG AF+ ++T+ A+ A + MH C P+V
Sbjct: 32 MFSPFGQIEECRIL---RGPD-GLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIV 87
Query: 58 VRLA 61
V+ A
Sbjct: 88 VKFA 91
>gi|449668124|ref|XP_002167931.2| PREDICTED: CUGBP Elav-like family member 2-like [Hydra
magnipapillata]
Length = 511
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 17/102 (16%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA---CGRPLV 57
MFSPYG I L R P G +G AFI+YST+ +A+ A + MH C P+V
Sbjct: 128 MFSPYGTIEELTIL---RNPDGGS-KGCAFIKYSTRLQAQNAIKAMHNSQTMENCSSPVV 183
Query: 58 VRLAS---EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRS 96
V++A EK + ++ VG +G T GQ N S
Sbjct: 184 VKIADTEREKIQKRMQSMATNLVG-------LGMTMGQCNGS 218
>gi|395538420|ref|XP_003771177.1| PREDICTED: RNA binding protein fox-1 homolog 2 [Sarcophilus
harrisii]
Length = 392
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 146 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 200
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 201 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 239
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 240 QADVSLGNDAAVPLSGRGGINTY 262
>gi|72387123|ref|XP_843986.1| RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175980|gb|AAX70103.1| RNA-binding protein, putative [Trypanosoma brucei]
gi|70800518|gb|AAZ10427.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 593
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FSPYG+I+S + R G G AF+ ++T E+A+ A E + G + GR +VV+
Sbjct: 149 LFSPYGEILSAAVM---RNIHTGDSLGTAFVRFATTEQAQAAMEALTGYVLEGRSMVVQW 205
Query: 61 ASEKYLEDAAQNSSKAVGEANK 82
A Q+ VGEA K
Sbjct: 206 AKR-------QHDDTPVGEARK 220
>gi|403333763|gb|EJY66002.1| La-related protein 7 [Oxytricha trifallax]
Length = 500
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA 51
+F GKI++ + R PK G+P+GFAF+EYS+ EEA+ A E + ++
Sbjct: 240 IFKRAGKIIN---VQMPRYPKSGLPKGFAFVEYSSPEEAQHAVEMFNNKIV 287
>gi|119580482|gb|EAW60078.1| RNA binding motif protein 9, isoform CRA_g [Homo sapiens]
Length = 372
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 126 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 180
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 181 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 219
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 220 QADVSLGNDAAVPLSGRGGINTY 242
>gi|74189486|dbj|BAE22747.1| unnamed protein product [Mus musculus]
Length = 590
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 243 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 297
Query: 62 SEK 64
K
Sbjct: 298 QRK 300
>gi|389610655|dbj|BAM18939.1| polyA-binding protein [Papilio polytes]
Length = 611
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 15/97 (15%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 316 FAPFGTITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 370
Query: 62 SEK----------YLEDAAQNSSKAVGEANKTGFVGG 88
K Y++ A + +G+ + G GG
Sbjct: 371 QRKEDRKAHLTSQYMQRMASMRMQQMGQIFQPGGTGG 407
>gi|334347999|ref|XP_001375901.2| PREDICTED: RNA binding protein fox-1 homolog 2-like [Monodelphis
domestica]
Length = 395
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 149 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 203
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 204 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 242
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 243 QADVSLGNDAAVPLSGRGGINTY 265
>gi|328865553|gb|EGG13939.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 949
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S L ++ P G RGF FIEY+ E A A + M+ + GR + VR
Sbjct: 623 FSPFGPIKS---LSLSKDPATGRSRGFCFIEYTYPEAAINAIQNMNQKTISGRQIKVRQP 679
Query: 62 SEKYLEDAA 70
S + AA
Sbjct: 680 SIPVINPAA 688
>gi|198421258|ref|XP_002129292.1| PREDICTED: hypothetical protein [Ciona intestinalis]
Length = 537
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI + +++ RG K GF FI + TKE+ AK+ +HG + GR + V
Sbjct: 274 MFGKHGKIADVEIIFNERGSK-----GFGFITFETKEDGDRAKKALHGTIVEGRKIEVND 328
Query: 61 ASEK 64
A+ +
Sbjct: 329 ATAR 332
>gi|67623121|ref|XP_667843.1| poly(a)-binding protein fabm [Cryptosporidium hominis TU502]
gi|54659004|gb|EAL37605.1| poly(a)-binding protein fabm [Cryptosporidium hominis]
Length = 746
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF P+G + S + + GV RGF F+ + + +EA A +MH +L G+PL V L
Sbjct: 382 MFEPFGTVSSVSI----KTDESGVSRGFGFVSFLSPDEATKAITEMHLKLVRGKPLYVGL 437
Query: 61 ASEK 64
K
Sbjct: 438 HERK 441
>gi|47219550|emb|CAG09904.1| unnamed protein product [Tetraodon nigroviridis]
Length = 623
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVML-----EEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|410898224|ref|XP_003962598.1| PREDICTED: polyadenylate-binding protein 4-like [Takifugu rubripes]
Length = 653
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVML-----EEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|119580479|gb|EAW60075.1| RNA binding motif protein 9, isoform CRA_d [Homo sapiens]
Length = 362
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 126 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 180
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 181 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 219
Query: 121 QADNSSCNGSLNCLSGKDGLNN 142
QAD S N + LSG+ G+N
Sbjct: 220 QADVSLGNDAAVPLSGRGGINT 241
>gi|449674081|ref|XP_002164434.2| PREDICTED: probable RNA-binding protein 18-like, partial [Hydra
magnipapillata]
Length = 95
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 12 DFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHG 48
DF++HT GP +G PRGF FI++ EA A K++G
Sbjct: 35 DFVYHTSGPLKGEPRGFCFIQFEKDAEANRALVKLNG 71
>gi|449481863|ref|XP_004175961.1| PREDICTED: RNA binding protein fox-1 homolog 2-like isoform 4
[Taeniopygia guttata]
Length = 357
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 111 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 165
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 166 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 204
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 205 QADVSLGNDAAVPLSGRGGINTY 227
>gi|389608229|dbj|BAM17726.1| polyA-binding protein [Papilio xuthus]
Length = 619
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 15/97 (15%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 316 FAPFGTITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 370
Query: 62 SEK----------YLEDAAQNSSKAVGEANKTGFVGG 88
K Y++ A + +G+ + G GG
Sbjct: 371 QRKEDRKAHLTSQYMQRMASMRMQQMGQIFQPGGTGG 407
>gi|451798952|gb|AGF69179.1| polyadenylate-binding protein 2-like protein, partial [Triticum
aestivum]
Length = 497
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +GKI S + + GV +G F+ +ST+EEA A +M+G++ G+PL V
Sbjct: 224 LFSNFGKITSCKIMRD----QNGVSKGSGFVSFSTREEASQALTEMNGKMISGKPLYVAF 279
Query: 61 ASEK 64
A K
Sbjct: 280 AQRK 283
>gi|41152034|ref|NP_958453.1| polyadenylate-binding protein 4 [Danio rerio]
gi|31419252|gb|AAH53126.1| Poly(A) binding protein, cytoplasmic 4 (inducible form) [Danio
rerio]
Length = 637
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 315 FSPFGSITSAKVML-----EEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 369
Query: 62 SEK 64
K
Sbjct: 370 QRK 372
>gi|72534682|ref|NP_001026865.1| RNA binding protein fox-1 homolog 2 isoform 1 [Homo sapiens]
gi|18461369|gb|AAL71905.1|AF229058_1 hexaribonucleotide binding protein 2 [Homo sapiens]
gi|19264130|gb|AAH25281.1| RNA binding motif protein 9 [Homo sapiens]
gi|410354757|gb|JAA43982.1| RNA binding protein, fox-1 homolog 2 [Pan troglodytes]
Length = 380
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 130 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 184
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 185 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 223
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 224 QADVSLGNDAAVPLSGRGGINTY 246
>gi|388505224|gb|AFK40678.1| unknown [Lotus japonicus]
Length = 187
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 25 PRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64
PRGFAF+ Y+T+EE++ A E MHG+ GR + V +A +
Sbjct: 134 PRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKPR 173
>gi|119580477|gb|EAW60073.1| RNA binding motif protein 9, isoform CRA_b [Homo sapiens]
Length = 391
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 131 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 185
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 186 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 224
Query: 121 QADNSSCNGSLNCLSGKDGLNN 142
QAD S N + LSG+ G+N
Sbjct: 225 QADVSLGNDAAVPLSGRGGINT 246
>gi|341823643|dbj|BAK53481.1| RBFOX2 [Homo sapiens]
Length = 391
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 130 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 184
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 185 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 223
Query: 121 QADNSSCNGSLNCLSGKDGLNN 142
QAD S N + LSG+ G+N
Sbjct: 224 QADVSLGNDAAVPLSGRGGINT 245
>gi|119580476|gb|EAW60072.1| RNA binding motif protein 9, isoform CRA_a [Homo sapiens]
Length = 386
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 126 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 180
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 181 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 219
Query: 121 QADNSSCNGSLNCLSGKDGLNN 142
QAD S N + LSG+ G+N
Sbjct: 220 QADVSLGNDAAVPLSGRGGINT 241
>gi|343427578|emb|CBQ71105.1| probable RNA-binding protein [Sporisorium reilianum SRZ2]
Length = 866
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Query: 14 LWHTRGPKR--GVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQ 71
L R PK+ RGF F+EY+T EA+ A E + GR LV++ + AA+
Sbjct: 754 LKSVRLPKKFDNSTRGFGFVEYTTVREAQAAFEALKHTHLLGRHLVLQWSH------AAK 807
Query: 72 NSSKAVG---EANKTGFVGGTSGQMNRSAKIAAIK 103
+S + V + K+GFVG +G R+ K A IK
Sbjct: 808 DSREEVQMQRDKTKSGFVGAAAGDEVRADKRAKIK 842
>gi|317106694|dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas]
Length = 642
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +G I S + R P GV RG F+ +ST EEA A +M+G++ +PL V L
Sbjct: 330 LFSEFGTITSCKVM---RDPN-GVSRGSGFVAFSTAEEASRALTEMNGKMVVSKPLYVAL 385
Query: 61 ASEK 64
A K
Sbjct: 386 AQRK 389
>gi|158256356|dbj|BAF84149.1| unnamed protein product [Homo sapiens]
gi|384946148|gb|AFI36679.1| RNA binding protein fox-1 homolog 2 isoform 1 [Macaca mulatta]
gi|387541558|gb|AFJ71406.1| RNA binding protein fox-1 homolog 2 isoform 1 [Macaca mulatta]
Length = 381
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 131 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 185
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 186 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 224
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 225 QADVSLGNDAAVPLSGRGGINTY 247
>gi|62087504|dbj|BAD92199.1| PABPC4 protein variant [Homo sapiens]
Length = 358
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 12 FSPFGSITSAKVML-----EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 66
Query: 62 SEK 64
K
Sbjct: 67 QRK 69
>gi|410910966|ref|XP_003968961.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 635
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMLEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|395819880|ref|XP_003783306.1| PREDICTED: RNA binding protein fox-1 homolog 2 isoform 3 [Otolemur
garnettii]
Length = 367
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 131 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 185
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 186 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 224
Query: 121 QADNSSCNGSLNCLSGKDGLNN 142
QAD S N + LSG+ G+N
Sbjct: 225 QADVSLGNDAAVPLSGRGGINT 246
>gi|388505176|gb|AFK40654.1| unknown [Medicago truncatula]
Length = 267
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V ++ R + G RGFAF+ Y +EA A +++ GR+ GR + V+
Sbjct: 35 LFDKYGKVVD---IFIPRDRRTGESRGFAFVRYKYADEASKAVDRLDGRMVDGREITVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|303324711|pdb|2KXF|A Chain A, Solution Structure Of The First Two Rrm Domains Of
Fbp-Interacting Repressor (Fir)
gi|303324712|pdb|2KXH|A Chain A, Solution Structure Of The First Two Rrm Domains Of Fir
In The Complex With Fbp Nbox Peptide
Length = 199
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGR 54
F+P+G I S D W + K +GFAF+EY E A+LA E+M+ + GR
Sbjct: 34 FAPFGPIKSIDMSWDSVTMKH---KGFAFVEYEVPEAAQLALEQMNSVMLGGR 83
>gi|125591601|gb|EAZ31951.1| hypothetical protein OsJ_16124 [Oryza sativa Japonica Group]
Length = 867
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGP-KRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVR 59
+FSP+G+I S R P K G RGFAF+E+ TK+EA+ A + + GR LV+
Sbjct: 763 LFSPFGQIKS------LRLPMKFGSHRGFAFVEFVTKQEAQNALQALASTHLYGRHLVIE 816
Query: 60 LASE 63
A E
Sbjct: 817 RAKE 820
>gi|448519634|ref|XP_003868121.1| poly(A)-binding protein [Candida orthopsilosis Co 90-125]
gi|380352460|emb|CCG22686.1| poly(A)-binding protein [Candida orthopsilosis]
Length = 638
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F P+G I S + G RG F F+ +ST EEA A +M+ R+ G+PL V LA
Sbjct: 365 FKPFGTITSAKVMVDDAGKSRG----FGFVCFSTPEEATKAITEMNQRMVNGKPLYVALA 420
Query: 62 SEK 64
K
Sbjct: 421 QRK 423
>gi|380811212|gb|AFE77481.1| RNA binding protein fox-1 homolog 2 isoform 3 [Macaca mulatta]
Length = 377
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 131 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 185
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 186 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 224
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 225 QADVSLGNDAAVPLSGRGGINTY 247
>gi|125528820|gb|EAY76934.1| hypothetical protein OsI_04892 [Oryza sativa Indica Group]
Length = 505
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 23 GVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64
G RGF F+ +S + EAK AK+ M G++ GRPL + A +K
Sbjct: 438 GRSRGFGFVHFSNEYEAKCAKDAMDGKVMLGRPLRISFALDK 479
>gi|149023878|gb|EDL80375.1| rCG31475, isoform CRA_a [Rattus norvegicus]
Length = 660
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|78070599|gb|AAI06909.1| PABPC4 protein [Homo sapiens]
Length = 281
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 64 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 118
Query: 62 SEK 64
K
Sbjct: 119 QRK 121
>gi|348513239|ref|XP_003444150.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oreochromis niloticus]
Length = 634
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|332859485|ref|XP_003317218.1| PREDICTED: RNA binding protein fox-1 homolog 2 isoform 3 [Pan
troglodytes]
gi|397501807|ref|XP_003821566.1| PREDICTED: RNA binding protein fox-1 homolog 2 isoform 3 [Pan
paniscus]
Length = 367
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 131 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 185
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 186 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 224
Query: 121 QADNSSCNGSLNCLSGKDGLNN 142
QAD S N + LSG+ G+N
Sbjct: 225 QADVSLGNDAAVPLSGRGGINT 246
>gi|302762278|ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
gi|302814304|ref|XP_002988836.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300143407|gb|EFJ10098.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300168290|gb|EFJ34894.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
Length = 149
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G+I+ + + G RGF F+ Y T +EA+ A E M GR+ GR + V A
Sbjct: 57 FSPFGEIIEVRVIQDR---ETGRSRGFGFVSYITDQEAQKAMEAMDGRVLDGRTIRVNYA 113
Query: 62 SEK 64
+++
Sbjct: 114 TQR 116
>gi|119580483|gb|EAW60079.1| RNA binding motif protein 9, isoform CRA_h [Homo sapiens]
Length = 358
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 111 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 165
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 166 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 204
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 205 QADVSLGNDAAVPLSGRGGINTY 227
>gi|449270363|gb|EMC81046.1| RNA-binding protein 9, partial [Columba livia]
Length = 369
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 123 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 177
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 178 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 216
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 217 QADVSLGNDAAVPLSGRGGINTY 239
>gi|348569214|ref|XP_003470393.1| PREDICTED: RNA binding protein fox-1 homolog 2-like [Cavia
porcellus]
Length = 374
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 128 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 182
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 183 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 221
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 222 QADVSLGNDAAVPLSGRGGINTY 244
>gi|348513241|ref|XP_003444151.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oreochromis niloticus]
Length = 637
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|226501776|ref|NP_001148421.1| LOC100282036 [Zea mays]
gi|195619182|gb|ACG31421.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 218
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK++ ++ R + G PRGFAF+ Y+ ++EA+ A + + G GR L+V+
Sbjct: 37 LFDRYGKVLD---IYIPRDHRTGDPRGFAFVRYNYEDEARDAIDGLDGXRFDGRALMVQF 93
Query: 61 ASEKYLEDAAQNSSKAVGEAN 81
A KY +A + + E N
Sbjct: 94 A--KYGPNAEKIHRGRITEEN 112
>gi|62897393|dbj|BAD96637.1| PABPC4 protein variant [Homo sapiens]
Length = 371
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 25 FSPFGSITSAKVML-----EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 79
Query: 62 SEK 64
K
Sbjct: 80 QRK 82
>gi|7657504|ref|NP_055124.1| RNA binding protein fox-1 homolog 2 isoform 2 [Homo sapiens]
gi|2664429|emb|CAA15842.1| hypothetical protein [Homo sapiens]
gi|119580480|gb|EAW60076.1| RNA binding motif protein 9, isoform CRA_e [Homo sapiens]
Length = 367
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 131 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 185
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 186 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 224
Query: 121 QADNSSCNGSLNCLSGKDGLNN 142
QAD S N + LSG+ G+N
Sbjct: 225 QADVSLGNDAAVPLSGRGGINT 246
>gi|452820609|gb|EME27649.1| poly(A) binding / translation initiation factor [Galdieria
sulphuraria]
Length = 784
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G + S + +GV RGF F+ +ST EEA A +M+G++ +PL V LA
Sbjct: 383 FSNFGTLTSCRVMRD----DKGVSRGFGFVCFSTPEEATKAVTEMNGKMMGKKPLYVCLA 438
Query: 62 SEKYLEDA---AQNSSKAVGEANKTGFVGGT 89
K + A AQ + A G G V G+
Sbjct: 439 QRKEIRQAQLEAQRIAAAAGGLRIPGAVPGS 469
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS YG+I S + + VP+GFAF+ ++ E A A E+++GR G+ L V
Sbjct: 279 LFSLYGEITS----VYVPVDENEVPKGFAFVNFAKPECAAKAVEELNGRDFEGKSLYVGR 334
Query: 61 ASEK 64
A +K
Sbjct: 335 AQKK 338
>gi|449481859|ref|XP_004175959.1| PREDICTED: RNA binding protein fox-1 homolog 2-like isoform 2
[Taeniopygia guttata]
Length = 383
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 137 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 191
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 192 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 230
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 231 QADVSLGNDAAVPLSGRGGINTY 253
>gi|133925799|ref|NP_001076045.1| RNA binding protein fox-1 homolog 2 isoform 3 [Homo sapiens]
gi|332859481|ref|XP_001143459.2| PREDICTED: RNA binding protein fox-1 homolog 2 isoform 1 [Pan
troglodytes]
gi|395753297|ref|XP_002831104.2| PREDICTED: RNA binding protein fox-1 homolog 2-like isoform 1
[Pongo abelii]
gi|397501803|ref|XP_003821564.1| PREDICTED: RNA binding protein fox-1 homolog 2 isoform 1 [Pan
paniscus]
gi|47678649|emb|CAG30445.1| RBM9 [Homo sapiens]
gi|109451458|emb|CAK54590.1| RBM9 [synthetic construct]
gi|109452054|emb|CAK54889.1| RBM9 [synthetic construct]
gi|208965474|dbj|BAG72751.1| RNA binding motif protein 9 [synthetic construct]
gi|383411977|gb|AFH29202.1| RNA binding protein fox-1 homolog 2 isoform 3 [Macaca mulatta]
gi|410222442|gb|JAA08440.1| RNA binding protein, fox-1 homolog 2 [Pan troglodytes]
gi|410265956|gb|JAA20944.1| RNA binding protein, fox-1 homolog 2 [Pan troglodytes]
gi|410307444|gb|JAA32322.1| RNA binding protein, fox-1 homolog 2 [Pan troglodytes]
gi|410354753|gb|JAA43980.1| RNA binding protein, fox-1 homolog 2 [Pan troglodytes]
Length = 376
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 130 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 184
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 185 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 223
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 224 QADVSLGNDAAVPLSGRGGINTY 246
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS YG++V + + G RGF FI Y++ EEA A + + G+ GRP+ V A
Sbjct: 62 FSKYGEVVDARIIMDR---ETGRSRGFGFITYTSVEEASSAIQALDGQDLHGRPIRVNYA 118
Query: 62 SEK 64
+E+
Sbjct: 119 NER 121
>gi|348605282|ref|NP_001231766.1| RNA binding protein, fox-1 homolog (C. elegans) 2 [Sus scrofa]
Length = 381
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 131 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 185
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 186 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 224
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 225 QADVSLGNDAAVPLSGRGGINTY 247
>gi|344236474|gb|EGV92577.1| Polyadenylate-binding protein 4 [Cricetulus griseus]
Length = 524
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 305 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 359
Query: 62 SEK 64
K
Sbjct: 360 QRK 362
>gi|241315296|ref|XP_002408027.1| RNA-binding protein, putative [Ixodes scapularis]
gi|215497243|gb|EEC06737.1| RNA-binding protein, putative [Ixodes scapularis]
Length = 509
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGR 54
F P+G I S + W K +GFAF+EY E A+LA E+M+G L GR
Sbjct: 95 FRPFGPIKSINMSWDPVTQKH---KGFAFVEYELPEAAQLALEQMNGVLIGGR 144
>gi|126342328|ref|XP_001373103.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 942
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G RGF F+ +S EEA A +M+G+L +PL V LA
Sbjct: 619 FSPFGTITSAKVMMEG-----GHSRGFGFVCFSAPEEAAKAVSEMNGKLVATKPLYVALA 673
Query: 62 SEK 64
K
Sbjct: 674 QRK 676
>gi|115460478|ref|NP_001053839.1| Os04g0611500 [Oryza sativa Japonica Group]
gi|113565410|dbj|BAF15753.1| Os04g0611500, partial [Oryza sativa Japonica Group]
Length = 536
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 11/88 (12%)
Query: 1 MFSPYGKIVSEDFLWHTRGP-KRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVR 59
+FSP+G+I S R P K G RGFAF+E+ TK+EA+ A + + GR LV+
Sbjct: 432 LFSPFGQIKS------LRLPMKFGSHRGFAFVEFVTKQEAQNALQALASTHLYGRHLVIE 485
Query: 60 LASE-KYLEDA-AQNSSKAVGEANKTGF 85
A E + LE+ A+ +++ V E ++GF
Sbjct: 486 RAKEGETLEELRARTAAQFVDE--QSGF 511
>gi|13096978|gb|AAH03283.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 660
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|426360413|ref|XP_004047438.1| PREDICTED: polyadenylate-binding protein 1 [Gorilla gorilla
gorilla]
Length = 682
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 360 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 414
Query: 62 SEK 64
K
Sbjct: 415 QRK 417
>gi|34419622|ref|NP_570951.2| polyadenylate-binding protein 4 isoform 1 [Mus musculus]
gi|33991671|gb|AAH56432.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
gi|148698437|gb|EDL30384.1| mCG5546, isoform CRA_c [Mus musculus]
Length = 660
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|395753299|ref|XP_003779585.1| PREDICTED: RNA binding protein fox-1 homolog 2-like isoform 2
[Pongo abelii]
Length = 367
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 131 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 185
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 186 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 224
Query: 121 QADNSSCNGSLNCLSGKDGLNN 142
QAD S N + LSG+ G+N
Sbjct: 225 QADVSLGNDAAVPLSGRGGINT 246
>gi|348545316|ref|XP_003460126.1| PREDICTED: CUGBP Elav-like family member 1-like isoform 2
[Oreochromis niloticus]
Length = 485
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA---CGRPLV 57
MFSPYG+I L RGP G+ RG AF+ ++ ++ A+ A + MH C P+V
Sbjct: 127 MFSPYGQIEECRIL---RGPD-GLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIV 182
Query: 58 VRLASEK 64
V+ A +
Sbjct: 183 VKFADTQ 189
>gi|297283068|ref|XP_001113342.2| PREDICTED: polyadenylate-binding protein 4 [Macaca mulatta]
Length = 657
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 311 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 365
Query: 62 SEK 64
K
Sbjct: 366 QRK 368
>gi|289724641|gb|ADD18299.1| poly-U binding splicing factor [Glossina morsitans morsitans]
Length = 611
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGR 54
F P+G I S + W K +GFAF+EY E A+LA E+M+G L GR
Sbjct: 120 FLPFGPIKSINMSWDPITQKH---KGFAFVEYEIPEGAQLALEQMNGALMGGR 169
>gi|119627673|gb|EAX07268.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_h [Homo sapiens]
Length = 661
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|449481861|ref|XP_004175960.1| PREDICTED: RNA binding protein fox-1 homolog 2-like isoform 3
[Taeniopygia guttata]
Length = 373
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 127 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 181
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 182 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 220
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 221 QADVSLGNDAAVPLSGRGGINTY 243
>gi|410354759|gb|JAA43983.1| RNA binding protein, fox-1 homolog 2 [Pan troglodytes]
Length = 366
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 130 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 184
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 185 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 223
Query: 121 QADNSSCNGSLNCLSGKDGLNN 142
QAD S N + LSG+ G+N
Sbjct: 224 QADVSLGNDAAVPLSGRGGINT 245
>gi|348552994|ref|XP_003462312.1| PREDICTED: polyadenylate-binding protein 4-like isoform 1 [Cavia
porcellus]
Length = 660
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|301791994|ref|XP_002930965.1| PREDICTED: RNA-binding protein 9-like, partial [Ailuropoda
melanoleuca]
Length = 293
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 47 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 101
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 102 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 140
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 141 QADVSLGNDAAVPLSGRGGINTY 163
>gi|226492336|ref|NP_001150253.1| ribonucleoprotein [Zea mays]
gi|195637832|gb|ACG38384.1| ribonucleoprotein [Zea mays]
Length = 275
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F+ +VS + ++HT P+R G+AF+ +S+KE A A +G++ GRP+ V
Sbjct: 185 LFASAPGVVSAEVIFHTTTPRRSA--GYAFVSFSSKESAGAAISAFNGKILMGRPINVMF 242
Query: 61 ASE 63
E
Sbjct: 243 KDE 245
>gi|195425775|ref|XP_002061144.1| GK10324 [Drosophila willistoni]
gi|194157229|gb|EDW72130.1| GK10324 [Drosophila willistoni]
Length = 209
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 6 GKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65
G I D L+H GP G RG+AF+ ++ + A A K+ G R + VRLA
Sbjct: 38 GAIEKFDMLFHKGGPLMGQSRGYAFVTFAHSDGATQALLKLDGSQVGSRSIAVRLAKNIK 97
Query: 66 LEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSS 115
+D + + A T G +++++ I AI+ KLK LE ++
Sbjct: 98 YDDLQKPKPRLEIPALGT---GRREEKISKTEAIRAIEAKLKLLERQTDD 144
>gi|149023879|gb|EDL80376.1| rCG31475, isoform CRA_b [Rattus norvegicus]
Length = 656
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|426215226|ref|XP_004001875.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Ovis aries]
Length = 660
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|73992493|ref|XP_534430.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Canis lupus
familiaris]
Length = 611
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGVITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRILGTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|332231110|ref|XP_003264741.1| PREDICTED: RNA binding protein fox-1 homolog 2 isoform 3 [Nomascus
leucogenys]
Length = 367
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 131 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 185
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 186 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 224
Query: 121 QADNSSCNGSLNCLSGKDGLNN 142
QAD S N + LSG+ G+N
Sbjct: 225 QADVSLGNDAAVPLSGRGGINT 246
>gi|332231106|ref|XP_003264739.1| PREDICTED: RNA binding protein fox-1 homolog 2 isoform 1 [Nomascus
leucogenys]
Length = 376
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 130 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 184
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 185 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 223
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 224 QADVSLGNDAAVPLSGRGGINTY 246
>gi|323455941|gb|EGB11808.1| hypothetical protein AURANDRAFT_9375, partial [Aureococcus
anophagefferens]
Length = 79
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F PYGK V++ FL R + G PRGFAF+ +S+ EA+ A + G+ GR L V +
Sbjct: 21 LFGPYGK-VTDAFLPTER--ETGRPRGFAFVTFSSPAEAQAAIADLDGKEIDGRALRVNV 77
Query: 61 AS 62
++
Sbjct: 78 SN 79
>gi|125549686|gb|EAY95508.1| hypothetical protein OsI_17353 [Oryza sativa Indica Group]
Length = 904
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 11/88 (12%)
Query: 1 MFSPYGKIVSEDFLWHTRGP-KRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVR 59
+FSP+G+I S R P K G RGFAF+E+ TK+EA+ A + + GR LV+
Sbjct: 800 LFSPFGQIKS------LRLPMKFGSHRGFAFVEFVTKQEAQNALQALASTHLYGRHLVIE 853
Query: 60 LASE-KYLEDA-AQNSSKAVGEANKTGF 85
A E + LE+ A+ +++ V E ++GF
Sbjct: 854 RAKEGETLEELRARTAAQFVDE--QSGF 879
>gi|62529142|gb|AAX84843.1| RNA binding motif protein 9 [Homo sapiens]
Length = 370
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 130 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 184
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 185 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 223
Query: 121 QADNSSCNGSLNCLSGKDGLNN 142
QAD S N + LSG+ G+N
Sbjct: 224 QADVSLGNDAAVPLSGRGGINT 245
>gi|345777109|ref|XP_862055.2| PREDICTED: RNA binding protein fox-1 homolog 2 isoform 7 [Canis
lupus familiaris]
Length = 376
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 130 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 184
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 185 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 223
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 224 QADVSLGNDAAVPLSGRGGINTY 246
>gi|297834512|ref|XP_002885138.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330978|gb|EFH61397.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 542
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YG+IVS + H + G +GF F+ +S +EE+K AK ++G G+ LVVR+
Sbjct: 321 IFGRYGQIVSAKVMRH----ENGRSKGFGFVCFSNREESKQAKRYLNGFSVDGKLLVVRV 376
Query: 61 ASEK 64
A K
Sbjct: 377 AERK 380
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
MF+P+G I+S + + G +GF F+++ T++ A A+ +HG + G+ L V
Sbjct: 129 MFNPFGVILSCKVV-----EENGQSKGFGFVQFETEQSAVTARSALHGSMVDGKKLFV 181
>gi|164657987|ref|XP_001730119.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
gi|159104014|gb|EDP42905.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
Length = 664
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G S + R P G RGF F+ YS EEA A +M+G++ RPL V LA
Sbjct: 383 FAPFGTTTSAKVM---RTPT-GASRGFGFVCYSAPEEANKAVAEMNGKMIENRPLYVALA 438
Query: 62 SEK 64
K
Sbjct: 439 QRK 441
>gi|48734702|gb|AAH71591.1| PABPC4 protein [Homo sapiens]
Length = 660
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|417403696|gb|JAA48646.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 660
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|403292058|ref|XP_003937074.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 659
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|403283104|ref|XP_003932967.1| PREDICTED: RNA binding protein fox-1 homolog 2 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 367
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 131 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 185
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 186 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 224
Query: 121 QADNSSCNGSLNCLSGKDGLNN 142
QAD S N + LSG+ G+N
Sbjct: 225 QADVSLGNDAAVPLSGRGGINT 246
>gi|402854027|ref|XP_003891682.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Papio anubis]
Length = 660
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|395819876|ref|XP_003783304.1| PREDICTED: RNA binding protein fox-1 homolog 2 isoform 1 [Otolemur
garnettii]
Length = 376
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 130 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 184
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 185 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 223
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 224 QADVSLGNDAAVPLSGRGGINTY 246
>gi|338721254|ref|XP_003364341.1| PREDICTED: RNA binding protein fox-1 homolog 2-like isoform 3
[Equus caballus]
Length = 376
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 130 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 184
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 185 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 223
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 224 QADVSLGNDAAVPLSGRGGINTY 246
>gi|133925801|ref|NP_001076046.1| RNA binding protein fox-1 homolog 2 isoform 4 [Homo sapiens]
Length = 370
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 130 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 184
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 185 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 223
Query: 121 QADNSSCNGSLNCLSGKDGLNN 142
QAD S N + LSG+ G+N
Sbjct: 224 QADVSLGNDAAVPLSGRGGINT 245
>gi|208431833|ref|NP_001129125.1| polyadenylate-binding protein 4 isoform 1 [Homo sapiens]
gi|332808508|ref|XP_513344.3| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pan
troglodytes]
gi|395730714|ref|XP_002811047.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pongo abelii]
gi|397488842|ref|XP_003815452.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pan paniscus]
gi|426329062|ref|XP_004025563.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Gorilla
gorilla gorilla]
gi|66267552|gb|AAH94755.1| PABPC4 protein [Homo sapiens]
gi|119627668|gb|EAX07263.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_c [Homo sapiens]
gi|410227598|gb|JAA11018.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410227604|gb|JAA11021.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|440904028|gb|ELR54599.1| RNA-binding protein 9, partial [Bos grunniens mutus]
Length = 369
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 123 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 177
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 178 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 216
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 217 QADVSLGNDAAVPLSGRGGINTY 239
>gi|139948570|ref|NP_001077193.1| polyadenylate-binding protein 4 [Bos taurus]
gi|134024563|gb|AAI34510.1| PABPC4 protein [Bos taurus]
gi|296488909|tpg|DAA31022.1| TPA: poly A binding protein, cytoplasmic 4 [Bos taurus]
Length = 645
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|363727918|ref|XP_416291.3| PREDICTED: RNA binding protein fox-1 homolog 2 [Gallus gallus]
Length = 388
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 142 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 196
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 197 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 235
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 236 QADVSLGNDAAVPLSGRGGINTY 258
>gi|226496531|ref|NP_001152123.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|195652939|gb|ACG45937.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 161
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK++ ++ R + G PRGFAF+ Y+ ++EA+ A + + G GR L+V+
Sbjct: 35 LFDRYGKVLD---IYIPRDHRTGDPRGFAFVRYNYEDEAQDAIDGLDGMRFDGRALMVQF 91
Query: 61 ASEKYLEDAAQNSSKAVGEAN 81
A KY +A + + E N
Sbjct: 92 A--KYGPNAEKIHRGRITEEN 110
>gi|410263248|gb|JAA19590.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410263254|gb|JAA19593.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|403292060|ref|XP_003937075.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 643
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|390465724|ref|XP_002750686.2| PREDICTED: polyadenylate-binding protein 4 [Callithrix jacchus]
Length = 656
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|332248413|ref|XP_003273358.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|355557859|gb|EHH14639.1| hypothetical protein EGK_00600 [Macaca mulatta]
gi|383411103|gb|AFH28765.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
gi|384941238|gb|AFI34224.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
Length = 660
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|218192545|gb|EEC74972.1| hypothetical protein OsI_11001 [Oryza sativa Indica Group]
Length = 647
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+ +G I S + ++G+ +GF F+ Y+T EEAK A M G + G+PL V +A
Sbjct: 339 FNEFGNITSAKIMRD----EKGISKGFGFVCYNTPEEAKCAVSNMRGVMFYGKPLYVAIA 394
Query: 62 SEK 64
K
Sbjct: 395 QRK 397
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 2 FSPYGKIVSEDFLWHTRGPKR--GVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVR 59
FS YG ++S + KR G +GF F+ + E AK AKE M+G L + L V
Sbjct: 236 FSQYGLVISVKIM------KRDDGTSKGFGFVSFQNPESAKRAKESMNGMLLGSKTLYVA 289
Query: 60 LASEK 64
A +K
Sbjct: 290 RAQKK 294
>gi|198386356|ref|NP_001094008.1| polyadenylate-binding protein 4 [Rattus norvegicus]
gi|183985833|gb|AAI66452.1| Pabpc4 protein [Rattus norvegicus]
Length = 644
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|133919898|emb|CAL91352.1| RNA binding motif protein 9 [Homo sapiens]
Length = 398
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 138 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 192
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 193 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 231
Query: 121 QADNSSCNGSLNCLSGKDGLNN 142
QAD S N + LSG+ G+N
Sbjct: 232 QADVSLGNDAAVPLSGRGGINT 253
>gi|38345802|emb|CAE03574.2| OSJNBa0085I10.19 [Oryza sativa Japonica Group]
gi|38568013|emb|CAE05198.3| OSJNBa0070C17.5 [Oryza sativa Japonica Group]
Length = 904
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 11/88 (12%)
Query: 1 MFSPYGKIVSEDFLWHTRGP-KRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVR 59
+FSP+G+I S R P K G RGFAF+E+ TK+EA+ A + + GR LV+
Sbjct: 800 LFSPFGQIKS------LRLPMKFGSHRGFAFVEFVTKQEAQNALQALASTHLYGRHLVIE 853
Query: 60 LASE-KYLEDA-AQNSSKAVGEANKTGF 85
A E + LE+ A+ +++ V E ++GF
Sbjct: 854 RAKEGETLEELRARTAAQFVDE--QSGF 879
>gi|426215228|ref|XP_004001876.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Ovis aries]
Length = 644
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|417403591|gb|JAA48595.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 644
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|410966840|ref|XP_003989935.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Felis catus]
Length = 660
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|395853068|ref|XP_003799042.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Otolemur
garnettii]
Length = 662
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|351713677|gb|EHB16596.1| Polyadenylate-binding protein 4 [Heterocephalus glaber]
Length = 661
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|350585908|ref|XP_003482078.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Sus scrofa]
Length = 660
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|338721949|ref|XP_003364451.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Equus
caballus]
Length = 660
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|149608633|ref|XP_001515603.1| PREDICTED: polyadenylate-binding protein 4 [Ornithorhynchus
anatinus]
Length = 630
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVML-----EEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|119627667|gb|EAX07262.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_b [Homo sapiens]
Length = 645
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|56971379|gb|AAH88337.1| Pabpc4 protein, partial [Rattus norvegicus]
Length = 415
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 69 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 123
Query: 62 SEK 64
K
Sbjct: 124 QRK 126
>gi|355745175|gb|EHH49800.1| hypothetical protein EGM_00521 [Macaca fascicularis]
Length = 635
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 289 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 343
Query: 62 SEK 64
K
Sbjct: 344 QRK 346
>gi|344287653|ref|XP_003415567.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Loxodonta
africana]
Length = 660
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|296805985|ref|XP_002843812.1| nucleic acid-binding protein [Arthroderma otae CBS 113480]
gi|238845114|gb|EEQ34776.1| nucleic acid-binding protein [Arthroderma otae CBS 113480]
Length = 318
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 3 SPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLAS 62
S YGK+V ++ +RG + RGF ++++ EEAK A MH GR L V A
Sbjct: 111 SKYGKVVGSRIIYDSRG----LSRGFGYVKFENIEEAKKAVNDMHLSEFEGRKLSVNYAQ 166
Query: 63 EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMN 94
E+ Q + E +T FVG + Q+
Sbjct: 167 MDLKEETPQRTI----EPTRTVFVGNIAHQIT 194
>gi|110665622|gb|ABG81457.1| RNA binding motif protein 9 [Bos taurus]
Length = 284
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 26/141 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 149 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 203
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 204 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 242
Query: 121 QADNSSCNGSLNCLSGKDGLN 141
QAD S N + LSG+ G+N
Sbjct: 243 QADVSLGNDAAVPLSGRGGIN 263
>gi|33504434|emb|CAD44189.1| putative poly(A) binding protein [Mangifera indica]
Length = 130
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +G I S + R P G+ RG F+ ++T EEA A +M+G++ G+PL V L
Sbjct: 33 LFSQFGSITSCKVM---RDPN-GISRGSGFVAFTTPEEASRAILEMNGKMVVGKPLYVAL 88
Query: 61 ASEKYLEDA 69
A K + A
Sbjct: 89 AQRKEVRRA 97
>gi|11610605|gb|AAG38953.1|AF132026_1 testis-specific poly(A)-binding protein [Homo sapiens]
Length = 631
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|402854029|ref|XP_003891683.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Papio anubis]
Length = 644
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|326933139|ref|XP_003212666.1| PREDICTED: polyadenylate-binding protein 4-like [Meleagris
gallopavo]
Length = 636
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 320 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 374
Query: 62 SEK 64
K
Sbjct: 375 QRK 377
>gi|166918879|sp|A6QPR6.2|RFOX2_BOVIN RecName: Full=RNA binding protein fox-1 homolog 2; AltName:
Full=Fox-1 homolog B; AltName: Full=RNA-binding motif
protein 9; AltName: Full=RNA-binding protein 9
Length = 394
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 148 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 202
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 203 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 241
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 242 QADVSLGNDAAVPLSGRGGINTY 264
>gi|149693775|ref|XP_001503500.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Equus
caballus]
Length = 644
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|4504715|ref|NP_003810.1| polyadenylate-binding protein 4 isoform 2 [Homo sapiens]
gi|332808510|ref|XP_003308042.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730716|ref|XP_003775777.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pongo abelii]
gi|397488844|ref|XP_003815453.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pan paniscus]
gi|426329066|ref|XP_004025565.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Gorilla
gorilla gorilla]
gi|12229875|sp|Q13310.1|PABP4_HUMAN RecName: Full=Polyadenylate-binding protein 4; Short=PABP-4;
Short=Poly(A)-binding protein 4; AltName:
Full=Activated-platelet protein 1; Short=APP-1; AltName:
Full=Inducible poly(A)-binding protein; Short=iPABP
gi|1163177|gb|AAC50350.1| inducible poly(A)-binding protein [Homo sapiens]
gi|2801403|gb|AAB97309.1| polyadenylate binding protein [Homo sapiens]
gi|119627669|gb|EAX07264.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_d [Homo sapiens]
gi|410227600|gb|JAA11019.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|1585757|prf||2201474A inducible poly(A)-binding protein
Length = 644
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|426225223|ref|XP_004006766.1| PREDICTED: LOW QUALITY PROTEIN: RNA binding protein fox-1 homolog 2
[Ovis aries]
Length = 391
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 137 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 191
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 192 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 230
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 231 QADVSLGNDAAVPLSGRGGINTY 253
>gi|73909065|gb|AAH45608.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
Length = 631
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|403283100|ref|XP_003932965.1| PREDICTED: RNA binding protein fox-1 homolog 2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 376
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 130 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 184
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 185 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 223
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 224 QADVSLGNDAAVPLSGRGGINTY 246
>gi|356551226|ref|XP_003543978.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
domain-containing protein 1-like [Glycine max]
Length = 847
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGP-KRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVR 59
+FSP+G+I S R P K G RGFAF+EY T++EA+ A + + GR LV+
Sbjct: 740 LFSPFGQIKS------LRLPMKFGNHRGFAFVEYVTQQEAQNALKALSSTHLYGRHLVIE 793
Query: 60 LASE 63
A E
Sbjct: 794 RAKE 797
>gi|348552996|ref|XP_003462313.1| PREDICTED: polyadenylate-binding protein 4-like isoform 2 [Cavia
porcellus]
Length = 644
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|321464386|gb|EFX75394.1| sex-lethal protein variant 1 [Daphnia pulex]
Length = 263
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGR--PLVV 58
+FS +G IV + L + G+PRG AF+ + +EEA A E ++G + GR P+ V
Sbjct: 133 IFSAHGNIVQMNLL---KDKITGMPRGVAFVRFDKREEALAAIEHLNGTIPHGRTNPISV 189
Query: 59 RLASE 63
++A E
Sbjct: 190 KIAEE 194
>gi|291399204|ref|XP_002715240.1| PREDICTED: poly A binding protein, cytoplasmic 4-like [Oryctolagus
cuniculus]
Length = 644
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|332248415|ref|XP_003273359.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|383411101|gb|AFH28764.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
gi|384941236|gb|AFI34223.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
Length = 644
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|115452253|ref|NP_001049727.1| Os03g0278500 [Oryza sativa Japonica Group]
gi|108707490|gb|ABF95285.1| polyadenylate binding protein, types 1, 2, 3, 4 family protein,
expressed [Oryza sativa Japonica Group]
gi|113548198|dbj|BAF11641.1| Os03g0278500 [Oryza sativa Japonica Group]
gi|215678518|dbj|BAG92173.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624669|gb|EEE58801.1| hypothetical protein OsJ_10348 [Oryza sativa Japonica Group]
Length = 647
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+ +G I S + ++G+ +GF F+ Y+T EEAK A M G + G+PL V +A
Sbjct: 339 FNEFGNITSAKIMRD----EKGISKGFGFVCYNTPEEAKCAVSNMRGVMFYGKPLYVAIA 394
Query: 62 SEK 64
K
Sbjct: 395 QRK 397
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 2 FSPYGKIVSEDFLWHTRGPKR--GVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVR 59
FS YG ++S + KR G +GF F+ + E AK AKE M+G L + L V
Sbjct: 236 FSQYGLVISVKIM------KRDDGTSKGFGFVSFQNPESAKRAKESMNGMLLGSKTLYVA 289
Query: 60 LASEK 64
A +K
Sbjct: 290 RAQKK 294
>gi|410263250|gb|JAA19591.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 644
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|395853070|ref|XP_003799043.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Otolemur
garnettii]
Length = 646
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|348588301|ref|XP_003479905.1| PREDICTED: polyadenylate-binding protein 1-like [Cavia porcellus]
Length = 599
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 277 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 331
Query: 62 SEK 64
K
Sbjct: 332 QRK 334
>gi|344287651|ref|XP_003415566.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Loxodonta
africana]
Length = 644
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|335291035|ref|XP_003127861.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Sus scrofa]
Length = 644
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|149023880|gb|EDL80377.1| rCG31475, isoform CRA_c [Rattus norvegicus]
Length = 630
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|18858491|ref|NP_571688.1| CUGBP Elav-like family member 1 [Danio rerio]
gi|82247731|sp|Q9IBD0.1|CELF1_DANRE RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=EDEN-BP/Bruno-like protein; AltName:
Full=RNA-binding protein BRUNOL-2
gi|7670538|dbj|BAA95119.1| brul [Danio rerio]
Length = 501
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA---CGRPLV 57
MFSPYG+I L RGP G+ RG AF+ ++ ++ A+ A + MH C P+V
Sbjct: 127 MFSPYGQIEECRIL---RGPD-GLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIV 182
Query: 58 VRLASEK 64
V+ A +
Sbjct: 183 VKFADTQ 189
>gi|281344898|gb|EFB20482.1| hypothetical protein PANDA_020836 [Ailuropoda melanoleuca]
Length = 674
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 327 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 381
Query: 62 SEK 64
K
Sbjct: 382 QRK 384
>gi|47217896|emb|CAG05018.1| unnamed protein product [Tetraodon nigroviridis]
Length = 558
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 301 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 355
Query: 62 SEK 64
K
Sbjct: 356 QRK 358
>gi|355563624|gb|EHH20186.1| hypothetical protein EGK_02987, partial [Macaca mulatta]
gi|355784944|gb|EHH65795.1| hypothetical protein EGM_02634, partial [Macaca fascicularis]
Length = 389
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 139 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 193
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 194 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 232
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 233 QADVSLGNDAAVPLSGRGGINTY 255
>gi|348529271|ref|XP_003452137.1| PREDICTED: polyadenylate-binding protein 1-like [Oreochromis
niloticus]
Length = 635
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|29840825|sp|O43251.3|RFOX2_HUMAN RecName: Full=RNA binding protein fox-1 homolog 2; AltName:
Full=Fox-1 homolog B; AltName:
Full=Hexaribonucleotide-binding protein 2; AltName:
Full=RNA-binding motif protein 9; AltName:
Full=RNA-binding protein 9; AltName: Full=Repressor of
tamoxifen transcriptional activity
gi|19584572|gb|AAL67150.1| RNA binding motif protein 9 [Homo sapiens]
Length = 390
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 140 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 194
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 195 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 233
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 234 QADVSLGNDAAVPLSGRGGINTY 256
>gi|444706907|gb|ELW48224.1| Polyadenylate-binding protein 4 [Tupaia chinensis]
Length = 692
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVML-----EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|432937502|ref|XP_004082431.1| PREDICTED: polyadenylate-binding protein 4-like [Oryzias latipes]
Length = 629
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|355715843|gb|AES05420.1| RNA binding motif protein 9 [Mustela putorius furo]
Length = 388
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 139 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 193
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 194 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 232
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 233 QADVSLGNDAAVPLSGRGGINTY 255
>gi|449481865|ref|XP_002199304.2| PREDICTED: RNA binding protein fox-1 homolog 2-like isoform 1
[Taeniopygia guttata]
Length = 347
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 111 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 165
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 166 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 204
Query: 121 QADNSSCNGSLNCLSGKDGLNN 142
QAD S N + LSG+ G+N
Sbjct: 205 QADVSLGNDAAVPLSGRGGINT 226
>gi|449284083|gb|EMC90664.1| Polyadenylate-binding protein 1, partial [Columba livia]
Length = 573
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 250 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 304
Query: 62 SEK 64
K
Sbjct: 305 QRK 307
>gi|82802751|gb|ABB92426.1| PABP3 [Pan troglodytes]
Length = 632
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|410966842|ref|XP_003989936.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Felis catus]
Length = 644
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|351711255|gb|EHB14174.1| RNA-binding protein 9, partial [Heterocephalus glaber]
Length = 384
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 138 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 192
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 193 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 231
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 232 QADVSLGNDAAVPLSGRGGINTY 254
>gi|351725889|ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycine max]
gi|255625921|gb|ACU13305.1| unknown [Glycine max]
Length = 180
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 25 PRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64
PRGFAF+ Y+T+EE++ A E MHG+ GR + V +A +
Sbjct: 128 PRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKPR 167
>gi|225448281|ref|XP_002274860.1| PREDICTED: uncharacterized protein LOC100242306 [Vitis vinifera]
gi|296086805|emb|CBI32954.3| unnamed protein product [Vitis vinifera]
Length = 255
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
F YGK+V ++ R + G RGFAF+ Y +EA+ A +++ GR+ GR + V+
Sbjct: 35 FFDKYGKVVD---IFIPRDRRTGESRGFAFVRYKYADEAQKAVDRLDGRIVDGREITVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|194044632|ref|XP_001927442.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Sus scrofa]
Length = 610
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+PYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FAPYGMITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
Score = 35.4 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +GKI+S + G RG F F+ + E+A+ A M+G+ GR L V
Sbjct: 210 LFSQFGKILSVKVMRDDSGHSRG----FGFVNFEKHEDAQKAVTDMNGKEVSGRLLYVGR 265
Query: 61 ASEK 64
A ++
Sbjct: 266 AQKR 269
>gi|149066044|gb|EDM15917.1| RNA binding motif protein 9 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 317
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 26/141 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 131 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 185
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 186 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 224
Query: 121 QADNSSCNGSLNCLSGKDGLN 141
QAD S N + LSG+ G+N
Sbjct: 225 QADVSLGNEAAVPLSGRGGIN 245
>gi|148698436|gb|EDL30383.1| mCG5546, isoform CRA_b [Mus musculus]
Length = 580
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 331 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 385
Query: 62 SEK 64
K
Sbjct: 386 QRK 388
>gi|121700823|ref|XP_001268676.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
gi|119396819|gb|EAW07250.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
Length = 566
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ +F+ + + G RG+ F+++ +A+ A EKM+G GR + V L
Sbjct: 294 VFEPFGEL---EFVQLQKD-ETGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRAIRVGL 349
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGT-SGQMNR 95
++K+ D++ S+ G AN+ F G + SGQ R
Sbjct: 350 GNDKFTPDSSAQRSQGHG-ANQQNFQGSSFSGQGGR 384
>gi|448878220|gb|AGE46073.1| arginine/serine-rich splicing factor SC26 transcript II [Zea mays]
Length = 129
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK++ ++ R + G PRGFAF+ Y+ ++EA+ A + + G GR L+V+
Sbjct: 37 LFDRYGKVLD---IYIPRDHRTGDPRGFAFVRYNYEDEAQDAIDGLDGMRFDGRALMVQF 93
Query: 61 ASEKYLEDAAQNSSKAVGEAN 81
A KY +A + + E N
Sbjct: 94 A--KYGPNAEKIHRGRITEEN 112
>gi|440913295|gb|ELR62762.1| Polyadenylate-binding protein 1, partial [Bos grunniens mutus]
Length = 572
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 250 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 304
Query: 62 SEK 64
K
Sbjct: 305 QRK 307
>gi|426236179|ref|XP_004012050.1| PREDICTED: polyadenylate-binding protein 1 [Ovis aries]
Length = 577
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 255 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 309
Query: 62 SEK 64
K
Sbjct: 310 QRK 312
>gi|73976763|ref|XP_857000.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Canis lupus
familiaris]
Length = 644
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|115473447|ref|NP_001060322.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|33146621|dbj|BAC79909.1| putative splicing factor, arginine/serine-rich 2 (Splicing factor
SC35) [Oryza sativa Japonica Group]
gi|113611858|dbj|BAF22236.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|215687327|dbj|BAG91873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637485|gb|EEE67617.1| hypothetical protein OsJ_25178 [Oryza sativa Japonica Group]
Length = 275
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YG++V ++ R + G RGFAF+ Y ++EA+ A +++ GR+ GR ++V+
Sbjct: 35 LFEKYGEVVD---IYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRVVDGREIMVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|344296422|ref|XP_003419906.1| PREDICTED: RNA binding protein fox-1 homolog 2-like [Loxodonta
africana]
Length = 404
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 158 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 212
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 213 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 251
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 252 QADVSLGNDAAVPLSGRGGINTY 274
>gi|82802749|gb|ABB92425.1| PABP3 [Homo sapiens]
Length = 630
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|301624826|ref|XP_002941699.1| PREDICTED: polyadenylate-binding protein 4-like [Xenopus (Silurana)
tropicalis]
Length = 632
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 320 FSPFGSITSAKVML-----EEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 374
Query: 62 SEK 64
K
Sbjct: 375 QRK 377
>gi|261327113|emb|CBH10089.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 601
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FSPYG+I+S + R G G AF+ ++T E+A+ A E + G + GR +VV+
Sbjct: 149 LFSPYGEILSAAVM---RNIHTGDSLGTAFVRFATTEQAQAAMEALTGYVLEGRSMVVQW 205
Query: 61 ASEKYLEDAAQNSSKAVGEANK 82
A Q+ VGEA K
Sbjct: 206 AKR-------QHDDTPVGEARK 220
>gi|357437769|ref|XP_003589160.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355478208|gb|AES59411.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 647
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MFS +G I S + R P GV RG F+ +ST EEA A +M+G++ +PL V +
Sbjct: 334 MFSEFGTITSYKIM---RDPN-GVSRGSGFVAFSTPEEASRALGEMNGKMIVSKPLYVAV 389
Query: 61 ASEK 64
A K
Sbjct: 390 AQRK 393
>gi|114649018|ref|XP_001154541.1| PREDICTED: polyadenylate-binding protein 3 isoform 5 [Pan
troglodytes]
Length = 633
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|45238849|ref|NP_112241.2| polyadenylate-binding protein 3 [Homo sapiens]
gi|28201852|sp|Q9H361.2|PABP3_HUMAN RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3; AltName:
Full=Testis-specific poly(A)-binding protein
gi|20379668|gb|AAH27617.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|119628765|gb|EAX08360.1| poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|123982576|gb|ABM83029.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|123997243|gb|ABM86223.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|189055351|dbj|BAG36140.1| unnamed protein product [Homo sapiens]
Length = 631
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|432907583|ref|XP_004077665.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 635
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|432107630|gb|ELK32863.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 565
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 243 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 297
Query: 62 SEK 64
K
Sbjct: 298 QRK 300
>gi|57997079|emb|CAB66834.2| hypothetical protein [Homo sapiens]
Length = 631
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|390471283|ref|XP_002755935.2| PREDICTED: uncharacterized protein LOC100414323 [Callithrix
jacchus]
Length = 738
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 156 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 210
Query: 61 ASEKYLED 68
A+ + + +
Sbjct: 211 ATARVMTN 218
>gi|338721252|ref|XP_003364340.1| PREDICTED: RNA binding protein fox-1 homolog 2-like isoform 2
[Equus caballus]
Length = 367
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 131 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 185
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 186 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 224
Query: 121 QADNSSCNGSLNCLSGKDGLNN 142
QAD S N + LSG+ G+N
Sbjct: 225 QADVSLGNDAAVPLSGRGGINT 246
>gi|336376609|gb|EGO04944.1| hypothetical protein SERLA73DRAFT_174031 [Serpula lacrymans var.
lacrymans S7.3]
Length = 583
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ +F+ R P G +G+AF++Y E+A++A E+M G GR L V
Sbjct: 377 VFEPFGEL---EFVDLHRDPMTGRSKGYAFVQYKRAEDARMALEQMEGFELAGRTLRVNT 433
Query: 61 ASEKYLEDAAQNSS 74
EK AQ +
Sbjct: 434 VHEKGTARYAQQDT 447
>gi|338728570|ref|XP_001492678.3| PREDICTED: polyadenylate-binding protein 1 [Equus caballus]
Length = 565
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 243 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 297
Query: 62 SEK 64
K
Sbjct: 298 QRK 300
>gi|148697687|gb|EDL29634.1| RNA binding motif protein 9, isoform CRA_c [Mus musculus]
Length = 317
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 26/141 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 131 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 185
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 186 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 224
Query: 121 QADNSSCNGSLNCLSGKDGLN 141
QAD S N + LSG+ G+N
Sbjct: 225 QADVSLGNEAAVPLSGRGGIN 245
>gi|119612222|gb|EAW91816.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
gi|119612227|gb|EAW91821.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
Length = 419
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|410904819|ref|XP_003965889.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 636
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|358338100|dbj|GAA56425.1| RNA binding protein fox-1 [Clonorchis sinensis]
Length = 844
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+ PYG I+ + +++ RG K GF F+ ++ E+A+ A+E ++GR+ GR + V
Sbjct: 255 LLGPYGTILDVEIIFNERGSK-----GFGFVTFANAEDAERARENLNGRVVMGRKIEVNH 309
Query: 61 ASEKYL 66
A+ + L
Sbjct: 310 ATTRVL 315
>gi|336389603|gb|EGO30746.1| hypothetical protein SERLADRAFT_455043 [Serpula lacrymans var.
lacrymans S7.9]
Length = 583
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ +F+ R P G +G+AF++Y E+A++A E+M G GR L V
Sbjct: 377 VFEPFGEL---EFVDLHRDPMTGRSKGYAFVQYKRAEDARMALEQMEGFELAGRTLRVNT 433
Query: 61 ASEKYLEDAAQNSS 74
EK AQ +
Sbjct: 434 VHEKGTARYAQQDT 447
>gi|224081795|ref|XP_002196994.1| PREDICTED: polyadenylate-binding protein 4 [Taeniopygia guttata]
Length = 629
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|157125851|ref|XP_001654419.1| polyadenylate-binding protein [Aedes aegypti]
gi|157125853|ref|XP_001654420.1| polyadenylate-binding protein [Aedes aegypti]
gi|94468824|gb|ABF18261.1| polyadenylate-binding protein [Aedes aegypti]
gi|108873484|gb|EAT37709.1| AAEL010318-PB [Aedes aegypti]
gi|108873485|gb|EAT37710.1| AAEL010318-PA [Aedes aegypti]
Length = 628
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 15/97 (15%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + + G +GF F+ +S EEA A +M+GR+ +PL V LA
Sbjct: 306 FSPFGTITSAKVML-----EEGRSKGFGFVCFSAAEEATKAVTEMNGRIVGSKPLYVALA 360
Query: 62 SEK----------YLEDAAQNSSKAVGEANKTGFVGG 88
K Y++ A + +G+ + G GG
Sbjct: 361 QRKEDRKAHLASQYMQRMANMRMQHMGQIFQPGGNGG 397
>gi|373854326|ref|ZP_09597124.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391231688|ref|ZP_10267894.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
gi|372472193|gb|EHP32205.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391221349|gb|EIP99769.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
Length = 122
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 27/42 (64%)
Query: 23 GVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64
G PRGFAF+ ST EEAK+A EK++G GR L V A K
Sbjct: 42 GRPRGFAFVTMSTPEEAKIAAEKLNGVDLGGRALTVNEARPK 83
>gi|224046575|ref|XP_002200268.1| PREDICTED: polyadenylate-binding protein 1 [Taeniopygia guttata]
Length = 637
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|221121498|ref|XP_002156904.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Hydra
magnipapillata]
Length = 635
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS YG I S + ++G+ +GF F+ +S+ +EA A +M+GR+ +PL V LA
Sbjct: 314 FSTYGTITSAKVM----KDEKGISKGFGFVCFSSPDEATKAVTEMNGRILVTKPLYVALA 369
Query: 62 SEKYLEDAAQNSSKAVGEAN 81
K E AQ S++ + N
Sbjct: 370 QRKE-ERRAQLSTQFLQRVN 388
>gi|148229527|ref|NP_001085857.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Xenopus
laevis]
gi|49118872|gb|AAH73435.1| MGC80927 protein [Xenopus laevis]
Length = 626
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVML-----EEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|449551106|gb|EMD42070.1| hypothetical protein CERSUDRAFT_90674 [Ceriporiopsis subvermispora
B]
Length = 623
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ +F+ R P G +G+AF++Y E+A++A E+M G GR L V
Sbjct: 416 VFEPFGEL---EFVDLHRDPMTGRSKGYAFVQYKRSEDARMALEQMEGFELAGRTLRVNT 472
Query: 61 ASEK 64
EK
Sbjct: 473 VHEK 476
>gi|387017716|gb|AFJ50976.1| Polyadenylate-binding protein 1-like [Crotalus adamanteus]
Length = 636
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|193787802|dbj|BAG53005.1| unnamed protein product [Homo sapiens]
Length = 636
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|47229361|emb|CAF99349.1| unnamed protein product [Tetraodon nigroviridis]
Length = 380
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 83 FSPFGTITSAKVMLEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 137
Query: 62 SEK 64
K
Sbjct: 138 QRK 140
>gi|410263252|gb|JAA19592.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|397482906|ref|XP_003812655.1| PREDICTED: polyadenylate-binding protein 3-like [Pan paniscus]
Length = 634
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|301790633|ref|XP_002930398.1| PREDICTED: polyadenylate-binding protein 4-like [Ailuropoda
melanoleuca]
Length = 644
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|170044609|ref|XP_001849934.1| polyadenylate-binding protein 1 [Culex quinquefasciatus]
gi|167867688|gb|EDS31071.1| polyadenylate-binding protein 1 [Culex quinquefasciatus]
Length = 628
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 15/97 (15%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + + G +GF F+ +S EEA A +M+GR+ +PL V LA
Sbjct: 306 FSPFGTITSAKVML-----EEGRSKGFGFVCFSAAEEATKAVTEMNGRIVGSKPLYVALA 360
Query: 62 SEK----------YLEDAAQNSSKAVGEANKTGFVGG 88
K Y++ A + +G+ + G GG
Sbjct: 361 QRKEDRKAHLASQYMQRMANMRMQHMGQIFQPGGNGG 397
>gi|444706057|gb|ELW47419.1| Polyadenylate-binding protein 1 [Tupaia chinensis]
Length = 636
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|22507391|ref|NP_683717.1| polyadenylate-binding protein 4 isoform 2 [Mus musculus]
gi|16307591|gb|AAH10345.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 615
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|403292062|ref|XP_003937076.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 630
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|402854031|ref|XP_003891684.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Papio anubis]
Length = 631
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|344287655|ref|XP_003415568.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Loxodonta
africana]
Length = 631
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|242076392|ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
gi|241939315|gb|EES12460.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
Length = 664
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +GKI S + + G+ +G F+ +ST+EEA A +M+G++ G+PL V
Sbjct: 347 LFSNFGKITS----YKVMRDQNGLSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAF 402
Query: 61 ASEK 64
A K
Sbjct: 403 AQRK 406
>gi|410966844|ref|XP_003989937.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Felis catus]
Length = 631
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|693937|emb|CAA88401.1| polyadenylate binding protein II [Homo sapiens]
Length = 522
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 289 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 343
Query: 62 SEK 64
K
Sbjct: 344 QRK 346
>gi|345566791|gb|EGX49733.1| hypothetical protein AOL_s00078g222 [Arthrobotrys oligospora ATCC
24927]
Length = 303
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F +GK+VS ++ RG+ +GF ++EY ++ A A +KMHG + GR + V+
Sbjct: 132 FGEFGKVVSAKVVYD----PRGLSKGFGYVEYEEQDAATAAVQKMHGLIVDGRRINVQYV 187
Query: 62 SEKYLEDAAQNSSKAVGEANKTGFVGGTS 90
E S A ++T F+G S
Sbjct: 188 LRPDREGPTNGESNA---PSRTLFIGNLS 213
>gi|332248417|ref|XP_003273360.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|383411099|gb|AFH28763.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
gi|384941234|gb|AFI34222.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
Length = 631
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|328871935|gb|EGG20305.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 567
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+ YG I S + R K +GF F+ Y+T +EA A +MHGR+ +PL V A
Sbjct: 302 FAAYGTITSAKVM---RDDKSTSSKGFGFVCYTTPDEASKAVAEMHGRMVGNKPLYVAFA 358
Query: 62 SEK 64
K
Sbjct: 359 QRK 361
>gi|208431836|ref|NP_001129126.1| polyadenylate-binding protein 4 isoform 3 [Homo sapiens]
gi|332808512|ref|XP_003308043.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730718|ref|XP_003775778.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pongo abelii]
gi|426329064|ref|XP_004025564.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Gorilla
gorilla gorilla]
gi|119627671|gb|EAX07266.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_f [Homo sapiens]
gi|410227602|gb|JAA11020.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|440793396|gb|ELR14581.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 964
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVR-- 59
F+ +GK+V + + + G PRGF F+E+ TKEEA A EK++ + GR + V
Sbjct: 305 FAAHGKLVD---VIIPKNKETGNPRGFGFVEFFTKEEAANALEKVNAQPIRGRRVAVDWC 361
Query: 60 LASEKYLEDAAQNSSKA 76
LA E YL+ + KA
Sbjct: 362 LARESYLKHVIEEEVKA 378
>gi|395853072|ref|XP_003799044.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Otolemur
garnettii]
Length = 633
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|380793569|gb|AFE68660.1| polyadenylate-binding protein 4 isoform 3, partial [Macaca mulatta]
Length = 485
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|348545314|ref|XP_003460125.1| PREDICTED: CUGBP Elav-like family member 1-like isoform 1
[Oreochromis niloticus]
Length = 509
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA---CGRPLV 57
MFSPYG+I L RGP G+ RG AF+ ++ ++ A+ A + MH C P+V
Sbjct: 153 MFSPYGQIEECRIL---RGPD-GLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIV 208
Query: 58 VRLASEK 64
V+ A +
Sbjct: 209 VKFADTQ 215
>gi|338721952|ref|XP_003364452.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Equus
caballus]
Length = 631
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|13435438|gb|AAH04587.1| Pabpc1 protein [Mus musculus]
Length = 527
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 205 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 259
Query: 62 SEK 64
K
Sbjct: 260 QRK 262
>gi|449268618|gb|EMC79472.1| Polyadenylate-binding protein 4 [Columba livia]
Length = 630
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGAITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|431922543|gb|ELK19486.1| Polyadenylate-binding protein 4 [Pteropus alecto]
Length = 720
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|426215230|ref|XP_004001877.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Ovis aries]
Length = 631
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|53754|emb|CAA46522.1| poly(A) binding protein [Mus musculus]
Length = 636
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|348553000|ref|XP_003462315.1| PREDICTED: polyadenylate-binding protein 4-like isoform 4 [Cavia
porcellus]
Length = 631
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|281350417|gb|EFB26001.1| hypothetical protein PANDA_001865 [Ailuropoda melanoleuca]
Length = 640
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 318 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 372
Query: 62 SEK 64
K
Sbjct: 373 QRK 375
>gi|149637721|ref|XP_001509272.1| PREDICTED: polyadenylate-binding protein 1-like [Ornithorhynchus
anatinus]
Length = 636
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|297851860|ref|XP_002893811.1| PAB1 binding protein 1 [Arabidopsis lyrata subsp. lyrata]
gi|297339653|gb|EFH70070.1| PAB1 binding protein 1 [Arabidopsis lyrata subsp. lyrata]
Length = 403
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +G I+S + H P R + +G F+E+ST EEA A KM+G++ +P+ V L
Sbjct: 242 LFSEFGTIISCKVMVH---PNR-ISKGVGFVEFSTSEEASKAMLKMNGKVVGNKPIYVSL 297
Query: 61 A 61
A
Sbjct: 298 A 298
>gi|194696360|gb|ACF82264.1| unknown [Zea mays]
gi|414869196|tpg|DAA47753.1| TPA: ribonucleoprotein [Zea mays]
Length = 275
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F+ +VS + ++HT P+R G+AF+ +S+KE A A +G++ GRP+ V
Sbjct: 185 LFASAPGVVSAEVIFHTTTPRRSA--GYAFVSFSSKESAGAAISAFNGKILMGRPINVMF 242
Query: 61 ASE 63
E
Sbjct: 243 KDE 245
>gi|448878218|gb|AGE46072.1| arginine/serine-rich splicing factor SC26 transcript I [Zea mays]
Length = 218
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK++ ++ R + G PRGFAF+ Y+ ++EA+ A + + G GR L+V+
Sbjct: 37 LFDRYGKVLD---IYIPRDHRTGDPRGFAFVRYNYEDEARDAIDGLDGMRFDGRALMVQF 93
Query: 61 ASEKYLEDAAQNSSKAVGEAN 81
A KY +A + + E N
Sbjct: 94 A--KYGPNAEKIHRGRITEEN 112
>gi|41388837|gb|AAH65540.1| PABPC4 protein [Homo sapiens]
Length = 631
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|357490719|ref|XP_003615647.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|355516982|gb|AES98605.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 140
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V ++ R + G RGFAF+ Y +EA A +++ GR+ GR + V+
Sbjct: 35 LFDKYGKVVD---IFIPRDRRTGESRGFAFVRYKYADEASKAVDRLDGRMVDGREITVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|327285428|ref|XP_003227435.1| PREDICTED: polyadenylate-binding protein 4-like [Anolis
carolinensis]
Length = 616
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 301 FSPFGSITSAKVML-----EEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 355
Query: 62 SEK 64
K
Sbjct: 356 QRK 358
>gi|327283838|ref|XP_003226647.1| PREDICTED: polyadenylate-binding protein 1-like [Anolis
carolinensis]
Length = 636
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|194224457|ref|XP_001500563.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Equus
caballus]
Length = 612
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGVITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIIGTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|335775987|gb|AEH58755.1| polyadenylate-binding protein 1-like protein [Equus caballus]
Length = 510
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 188 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 242
Query: 62 SEK 64
K
Sbjct: 243 QRK 245
>gi|71896197|ref|NP_001026768.1| polyadenylate-binding protein 1 [Gallus gallus]
gi|53130422|emb|CAG31540.1| hypothetical protein RCJMB04_7l20 [Gallus gallus]
Length = 637
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|410930632|ref|XP_003978702.1| PREDICTED: CUGBP Elav-like family member 1-like [Takifugu rubripes]
Length = 376
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA---CGRPLV 57
MFSPYG+I L RGP G+ RG AF+ ++ ++ A+ A + MH C P+V
Sbjct: 127 MFSPYGQIEECRIL---RGPD-GLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIV 182
Query: 58 VRLASEK 64
V+ A +
Sbjct: 183 VKFADTQ 189
>gi|327272096|ref|XP_003220822.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 3 [Anolis
carolinensis]
Length = 487
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA---CGRPLV 57
MFSP+G+I L RGP G+ RG AF+ +ST+ A+ A + MH C P+V
Sbjct: 169 MFSPFGQIEECRIL---RGPD-GLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIV 224
Query: 58 VRLASEK 64
V+ A +
Sbjct: 225 VKFADTQ 231
>gi|207080212|ref|NP_001128842.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|75070631|sp|Q5R8F7.1|PABP1_PONAB RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|55730462|emb|CAH91953.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|60302694|ref|NP_001012539.1| CUGBP Elav-like family member 1 [Gallus gallus]
gi|60098733|emb|CAH65197.1| hypothetical protein RCJMB04_7f23 [Gallus gallus]
Length = 485
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA---CGRPLV 57
MFSP+G+I L RGP G+ RG AF+ ++T+ A+ A + MH C P+V
Sbjct: 127 MFSPFGQIEECRIL---RGPD-GLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIV 182
Query: 58 VRLASEK 64
V+ A +
Sbjct: 183 VKFADTQ 189
>gi|19705459|ref|NP_599180.1| polyadenylate-binding protein 1 [Rattus norvegicus]
gi|47605941|sp|Q9EPH8.1|PABP1_RAT RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|12188891|emb|CAC21554.1| poly(A) binding protein [Rattus norvegicus]
gi|52789215|gb|AAH83176.1| Poly(A) binding protein, cytoplasmic 1 [Rattus norvegicus]
gi|149066519|gb|EDM16392.1| rCG60104 [Rattus norvegicus]
Length = 636
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|344279674|ref|XP_003411612.1| PREDICTED: polyadenylate-binding protein 1 [Loxodonta africana]
Length = 612
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGVITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIIGTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +GK++S + G RG F F+ + EEA+ A M+G+ GR L V
Sbjct: 210 LFSQFGKLLSVKVMKDNNGHSRG----FGFVNFEKHEEAQKAVMDMNGKEVSGRQLYVGR 265
Query: 61 ASEK 64
A ++
Sbjct: 266 AQKR 269
>gi|301756358|ref|XP_002914026.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 636
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|148698435|gb|EDL30382.1| mCG5546, isoform CRA_a [Mus musculus]
Length = 632
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 331 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 385
Query: 62 SEK 64
K
Sbjct: 386 QRK 388
>gi|118101731|ref|XP_417821.2| PREDICTED: polyadenylate-binding protein 4 [Gallus gallus]
Length = 630
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|26354649|dbj|BAC40951.1| unnamed protein product [Mus musculus]
Length = 636
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|431901758|gb|ELK08635.1| Polyadenylate-binding protein 1 [Pteropus alecto]
Length = 636
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|7673357|gb|AAF66824.1|AF190656_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 330
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FSPYG I S + R P GV +G F+ +S EEA A +M+G++ +PL V L
Sbjct: 9 LFSPYGTITSCKVM---RDPS-GVSKGSGFVAFSNPEEASRALSEMNGKMVVSKPLYVAL 64
Query: 61 ASEK 64
A K
Sbjct: 65 AQRK 68
>gi|74137801|dbj|BAE24074.1| unnamed protein product [Mus musculus]
Length = 550
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ + ++EEA A +M+GR+ +PL V LA
Sbjct: 215 FSPFGSITSAKVMLED-----GRSKGFGFVCFPSREEATKAVTEMNGRIVGSKPLYVALA 269
Query: 62 SEK 64
K
Sbjct: 270 QRK 272
>gi|291388359|ref|XP_002710763.1| PREDICTED: poly A binding protein, cytoplasmic 4 [Oryctolagus
cuniculus]
Length = 636
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|74212334|dbj|BAE30919.1| unnamed protein product [Mus musculus]
Length = 636
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|31560656|ref|NP_032800.2| polyadenylate-binding protein 1 [Mus musculus]
gi|341941223|sp|P29341.2|PABP1_MOUSE RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|13278026|gb|AAH03870.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|15029950|gb|AAH11207.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|18606321|gb|AAH23145.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|26336853|dbj|BAC32110.1| unnamed protein product [Mus musculus]
gi|29145018|gb|AAH46233.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|74144576|dbj|BAE36120.1| unnamed protein product [Mus musculus]
gi|74145579|dbj|BAE36203.1| unnamed protein product [Mus musculus]
gi|74179929|dbj|BAE36522.1| unnamed protein product [Mus musculus]
gi|74198265|dbj|BAE35302.1| unnamed protein product [Mus musculus]
gi|74198320|dbj|BAE35327.1| unnamed protein product [Mus musculus]
gi|74214225|dbj|BAE40360.1| unnamed protein product [Mus musculus]
gi|74223327|dbj|BAE21553.1| unnamed protein product [Mus musculus]
gi|148676871|gb|EDL08818.1| poly A binding protein, cytoplasmic 1 [Mus musculus]
Length = 636
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|417410164|gb|JAA51559.1| Putative ataxin 2-binding protein rrm superfamily, partial
[Desmodus rotundus]
Length = 372
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 122 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 176
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 177 ATARVMTNKKMVAPYANGW------------------KLSPVVGAVYGPELYAASS---F 215
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 216 QADVSLGNDAAVPLSGRGGINTY 238
>gi|390476078|ref|XP_002759394.2| PREDICTED: polyadenylate-binding protein 1-like [Callithrix
jacchus]
Length = 633
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 311 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 365
Query: 62 SEK 64
K
Sbjct: 366 QRK 368
>gi|291408596|ref|XP_002720594.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oryctolagus cuniculus]
Length = 614
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|291408594|ref|XP_002720593.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oryctolagus cuniculus]
Length = 636
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|224156534|ref|XP_002199861.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like, partial
[Taeniopygia guttata]
Length = 156
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
F+P+G I S D W + K +GFAF+EY E A+LA E+M+ + GR + V
Sbjct: 33 FAPFGPIKSIDMSWDSVTMKH---KGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKV 86
>gi|35570|emb|CAA68428.1| unnamed protein product [Homo sapiens]
Length = 633
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 311 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 365
Query: 62 SEK 64
K
Sbjct: 366 QRK 368
>gi|355754577|gb|EHH58478.1| hypothetical protein EGM_08341 [Macaca fascicularis]
Length = 637
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|224094731|ref|XP_002310211.1| predicted protein [Populus trichocarpa]
gi|222853114|gb|EEE90661.1| predicted protein [Populus trichocarpa]
Length = 184
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G IV+ + R P+ G RGF FI Y + E + A E M+G+ C R + V A
Sbjct: 113 FSAFGVIVTNPKI--MRDPETGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 170
Query: 62 SEK 64
+K
Sbjct: 171 YKK 173
>gi|152013389|sp|Q5F3T7.2|CELF1_CHICK RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=RNA-binding protein BRUNOL-2
Length = 489
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA---CGRPLV 57
MFSP+G+I L RGP G+ RG AF+ ++T+ A+ A + MH C P+V
Sbjct: 127 MFSPFGQIEECRIL---RGPD-GLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIV 182
Query: 58 VRLASEK 64
V+ A +
Sbjct: 183 VKFADTQ 189
>gi|109120204|ref|XP_001091129.1| PREDICTED: polyadenylate-binding protein 1 isoform 2 [Macaca
mulatta]
Length = 637
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|449502234|ref|XP_002199924.2| PREDICTED: CUGBP Elav-like family member 1 [Taeniopygia guttata]
Length = 485
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA---CGRPLV 57
MFSP+G+I L RGP G+ RG AF+ ++T+ A+ A + MH C P+V
Sbjct: 127 MFSPFGQIEECRIL---RGPD-GLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIV 182
Query: 58 VRLASEK 64
V+ A +
Sbjct: 183 VKFADTQ 189
>gi|448878413|gb|AGE46169.1| arginine/serine-rich splicing factor SC39 transcript III
[Physcomitrella patens subsp. patens]
Length = 104
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
+F YGK+V ++ R + G RGFAF+ Y +EA+ A E++ GR GR +VV
Sbjct: 35 LFDRYGKVVD---IFIPRDRRTGESRGFAFVRYKYSDEAQKAIERLDGRAVDGRNIVV 89
>gi|395512247|ref|XP_003760354.1| PREDICTED: polyadenylate-binding protein 1 [Sarcophilus harrisii]
Length = 654
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 334 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 388
Query: 62 SEK 64
K
Sbjct: 389 QRK 391
>gi|354485887|ref|XP_003505113.1| PREDICTED: polyadenylate-binding protein 4-like [Cricetulus
griseus]
Length = 685
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 336 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 390
Query: 62 SEK 64
K
Sbjct: 391 QRK 393
>gi|151556970|gb|AAI49448.1| RBM9 protein [Bos taurus]
Length = 407
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 161 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 215
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 216 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 254
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 255 QADVSLGNDAAVPLSGRGGINTY 277
>gi|119612224|gb|EAW91818.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_d [Homo
sapiens]
Length = 472
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|119612225|gb|EAW91819.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_e [Homo
sapiens]
Length = 633
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 311 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 365
Query: 62 SEK 64
K
Sbjct: 366 QRK 368
>gi|41386798|ref|NP_776993.1| polyadenylate-binding protein 1 [Bos taurus]
gi|46367787|ref|NP_002559.2| polyadenylate-binding protein 1 [Homo sapiens]
gi|383872540|ref|NP_001244826.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|73974130|ref|XP_856708.1| PREDICTED: polyadenylate-binding protein 1 isoform 6 [Canis lupus
familiaris]
gi|194036975|ref|XP_001927782.1| PREDICTED: polyadenylate-binding protein 1 [Sus scrofa]
gi|332213999|ref|XP_003256115.1| PREDICTED: polyadenylate-binding protein 1 [Nomascus leucogenys]
gi|344273312|ref|XP_003408467.1| PREDICTED: polyadenylate-binding protein 1-like [Loxodonta
africana]
gi|402878853|ref|XP_003903080.1| PREDICTED: polyadenylate-binding protein 1 [Papio anubis]
gi|3183544|sp|P11940.2|PABP1_HUMAN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|47117093|sp|P61286.1|PABP1_BOVIN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|1562511|gb|AAD08718.1| poly(A)-binding protein [Homo sapiens]
gi|8979741|emb|CAB96752.1| polyadenylate-binding protein 1 [Bos taurus]
gi|16358990|gb|AAH15958.1| PABPC1 protein [Homo sapiens]
gi|23270713|gb|AAH23520.1| Poly(A) binding protein, cytoplasmic 1 [Homo sapiens]
gi|74268035|gb|AAI02366.1| Poly(A) binding protein, cytoplasmic 1 [Bos taurus]
gi|119612221|gb|EAW91815.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|119612223|gb|EAW91817.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|123993665|gb|ABM84434.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|123999981|gb|ABM87499.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|168278070|dbj|BAG11013.1| polyadenylate-binding protein 1 [synthetic construct]
gi|296480464|tpg|DAA22579.1| TPA: polyadenylate-binding protein 1 [Bos taurus]
gi|380811722|gb|AFE77736.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940022|gb|AFI33616.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940024|gb|AFI33617.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 636
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|326920382|ref|XP_003206453.1| PREDICTED: CUGBP Elav-like family member 1-like [Meleagris
gallopavo]
Length = 487
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA---CGRPLV 57
MFSP+G+I L RGP G+ RG AF+ ++T+ A+ A + MH C P+V
Sbjct: 126 MFSPFGQIEECRIL---RGPD-GLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIV 181
Query: 58 VRLASEK 64
V+ A +
Sbjct: 182 VKFADTQ 188
>gi|145306680|gb|ABP57104.1| CUG binding protein 1 [Gallus gallus]
Length = 487
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA---CGRPLV 57
MFSP+G+I L RGP G+ RG AF+ ++T+ A+ A + MH C P+V
Sbjct: 126 MFSPFGQIEECRIL---RGPD-GLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIV 181
Query: 58 VRLASEK 64
V+ A +
Sbjct: 182 VKFADTQ 188
>gi|432844409|ref|XP_004065755.1| PREDICTED: RNA binding protein fox-1 homolog 2-like [Oryzias
latipes]
Length = 392
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + + +A+ A+EK+HG L GR + V
Sbjct: 132 MFGQFGKILDVEIIFNERGSK-----GFGFVTFESSADAERAREKLHGTLVEGRKIEVNN 186
Query: 61 ASEKYLEDAAQNSSKAVGE 79
A+ + + + + + GE
Sbjct: 187 ATARVMTNKKITTPYSNGE 205
>gi|395745189|ref|XP_002824146.2| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Pongo
abelii]
Length = 636
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS YG++V + + G RGF FI Y++ EEA A + + G+ GRP+ V A
Sbjct: 62 FSKYGEVVDARIIMDR---ETGRSRGFGFITYTSVEEASSAIQALDGQDLHGRPIRVNYA 118
Query: 62 SEK 64
+E+
Sbjct: 119 NER 121
>gi|410987610|ref|XP_004000091.1| PREDICTED: polyadenylate-binding protein 1 [Felis catus]
Length = 672
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 350 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 404
Query: 62 SEK 64
K
Sbjct: 405 QRK 407
>gi|218200049|gb|EEC82476.1| hypothetical protein OsI_26921 [Oryza sativa Indica Group]
Length = 271
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YG++V ++ R + G RGFAF+ Y ++EA+ A +++ GR+ GR ++V+
Sbjct: 35 LFEKYGEVVD---IYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRVVDGREIMVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|119627670|gb|EAX07265.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_e [Homo sapiens]
Length = 615
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|13560783|gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
Length = 658
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS YG I S + R P G+ RG F+ +ST EEA A +M+G++ +PL V L
Sbjct: 341 LFSEYGTITSCKVM---RDPS-GISRGSGFVAFSTPEEASRALGEMNGKMIVSKPLYVAL 396
Query: 61 ASEK 64
A K
Sbjct: 397 AQRK 400
>gi|441613453|ref|XP_004088139.1| PREDICTED: polyadenylate-binding protein 1-like [Nomascus
leucogenys]
Length = 638
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|88192774|pdb|2ERR|A Chain A, Nmr Structure Of The Rna Binding Domain Of Human Fox-1 In
Complex With Ugcaugu
Length = 109
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 49 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 103
Query: 61 ASEKYL 66
A+ + +
Sbjct: 104 ATARVM 109
>gi|348552998|ref|XP_003462314.1| PREDICTED: polyadenylate-binding protein 4-like isoform 3 [Cavia
porcellus]
Length = 615
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|82802761|gb|ABB92431.1| PABP3 [Aotus trivirgatus]
Length = 629
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|82802759|gb|ABB92430.1| PABP3 [Chlorocebus sabaeus]
Length = 635
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|402217675|gb|EJT97754.1| splicing factor CC1-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 640
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 11/125 (8%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ +F+ R P G +GFAF++Y E+A++A + M G GR L V
Sbjct: 428 VFEPFGEL---EFVDLHRDPLTGRSKGFAFVQYKRSEDARMALQSMDGFDLAGRQLKVNT 484
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSA---KIAAIKNKLKALEEESSSAK 117
EK Q+ S ++ E+ GG +R A K+A I+ A+ +S K
Sbjct: 485 VHEKGGAIRYQSQSDSLDESG-----GGNLNAASRQALMQKLARIEPPKPAISPMASLPK 539
Query: 118 KQKQA 122
Q+
Sbjct: 540 AAMQS 544
>gi|340384945|ref|XP_003390971.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like, partial
[Amphimedon queenslandica]
Length = 342
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGR 54
FSP+G I + + W + K +G+AF+E+ T E A+LA E+M G + GR
Sbjct: 114 FSPFGTIKTINMSWDSATMKH---KGYAFVEFETAEAAQLALEQMTGVIIGGR 163
>gi|270007747|gb|EFA04195.1| hypothetical protein TcasGA2_TC014444 [Tribolium castaneum]
Length = 522
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI D + P+ G +G+ FI + E+AK A E+++G GRP+ V
Sbjct: 281 IFEPFGKI---DNIQLIMDPETGRSKGYGFIAFRNCEDAKKALEQLNGFELAGRPMKVGN 337
Query: 61 ASEKYLEDAAQNSSKAV--GEANKTGFVGGTSGQMNRSAKIA 100
+E+ D Q + E +++G G +G++ K+A
Sbjct: 338 VTERL--DLQQQGPSILDSDELDRSGIDLGATGRLQLMFKLA 377
>gi|449274607|gb|EMC83685.1| CUG-BP- and ETR-3-like factor 1 [Columba livia]
Length = 515
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA---CGRPLV 57
MFSP+G+I L RGP G+ RG AF+ ++T+ A+ A + MH C P+V
Sbjct: 154 MFSPFGQIEECRIL---RGPD-GLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIV 209
Query: 58 VRLASEK 64
V+ A +
Sbjct: 210 VKFADTQ 216
>gi|426374960|ref|XP_004054321.1| PREDICTED: polyadenylate-binding protein 3 [Gorilla gorilla
gorilla]
Length = 631
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|1262583|dbj|BAA02244.1| polyadenylate binding protein II [Homo sapiens]
Length = 193
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 125 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 179
Query: 62 SEK 64
K
Sbjct: 180 QRK 182
>gi|118788821|ref|XP_317010.3| AGAP008433-PA [Anopheles gambiae str. PEST]
gi|116122929|gb|EAA12873.4| AGAP008433-PA [Anopheles gambiae str. PEST]
Length = 526
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI D + G +G+ FI + ++AK A E+++G GRP+ V
Sbjct: 288 IFEPFGKI---DNIQLIMDADTGRSKGYGFITFHNADDAKKALEQLNGFELAGRPMKVGN 344
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ D ++S E +++G G +G++ K+A
Sbjct: 345 VTERL--DVTTHASLDTDEMDRSGIELGATGRLQLMFKLA 382
>gi|110002613|gb|AAI18569.1| PABPC4 protein [Homo sapiens]
Length = 252
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 64 FSPFGSITSAKVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 118
Query: 62 SEK 64
K
Sbjct: 119 QRK 121
>gi|452822795|gb|EME29811.1| splicing factor, arginine/serine-rich 2 [Galdieria sulphuraria]
Length = 211
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YG++V + R + G RGFAF+ + +E+A+ A E+M GR GR + V+
Sbjct: 46 LFDKYGEVVD---CYIPRNRRNGHSRGFAFVRFRKEEDARKAMEEMDGREVDGRSITVQF 102
Query: 61 A 61
A
Sbjct: 103 A 103
>gi|173421|gb|AAA35320.1| poly(A)-binding protein, partial [Schizosaccharomyces pombe]
Length = 628
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G I S + +G +G F F+ Y+T EEA A +M+ R+ G+PL V LA
Sbjct: 370 FSAFGTITSAKIMTDEQGKSKG----FGFVCYTTPEEANKAVTEMNQRMLAGKPLYVALA 425
Query: 62 SEK 64
K
Sbjct: 426 QRK 428
>gi|72534835|ref|NP_001026846.1| poly A binding protein, cytoplasmic 1 a [Danio rerio]
gi|71534060|gb|AAH99992.1| Poly A binding protein, cytoplasmic 1 a [Danio rerio]
Length = 634
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|19114289|ref|NP_593377.1| mRNA export shuttling protein [Schizosaccharomyces pombe 972h-]
gi|3123239|sp|P31209.2|PABP_SCHPO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|2104439|emb|CAB08762.1| mRNA export shuttling protein [Schizosaccharomyces pombe]
Length = 653
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G I S + +G +G F F+ Y+T EEA A +M+ R+ G+PL V LA
Sbjct: 384 FSAFGTITSAKIMTDEQGKSKG----FGFVCYTTPEEANKAVTEMNQRMLAGKPLYVALA 439
Query: 62 SEK 64
K
Sbjct: 440 QRK 442
>gi|328782034|ref|XP_396057.4| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Apis
mellifera]
Length = 601
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + + G +GF F+ +S EEA A +M+GR+ +PL V LA
Sbjct: 287 FAPFGTITSAKVMM-----EEGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALA 341
Query: 62 SEK 64
K
Sbjct: 342 QRK 344
>gi|195392560|ref|XP_002054925.1| GJ19088 [Drosophila virilis]
gi|194149435|gb|EDW65126.1| GJ19088 [Drosophila virilis]
Length = 165
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
Query: 6 GKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65
G I D L+H GP G RG+AF+ ++ E A A K+ G R + VRLA
Sbjct: 5 GAIEKFDMLFHKGGPMVGQSRGYAFVTFTQNEGATNAIIKLDGTSVGNRCIAVRLAKNIK 64
Query: 66 LEDAAQNSSK----AVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSS 115
+D + + A+G + +++++ I AI+ KLK LE ++ +
Sbjct: 65 YDDLQRPKPRIEIPALGRVKR-------EEKISKADAIRAIEAKLKTLERQTDN 111
>gi|357168436|ref|XP_003581646.1| PREDICTED: probable RNA-binding protein 19-like [Brachypodium
distachyon]
Length = 894
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 11/88 (12%)
Query: 1 MFSPYGKIVSEDFLWHTRGP-KRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVR 59
+FSP+G++ S R P K G RGFAF+E+ TK+EA+ A + + GR LV+
Sbjct: 790 LFSPFGQLKS------LRLPMKFGSHRGFAFVEFVTKQEAQNALQALASTHLYGRHLVIE 843
Query: 60 LASE-KYLEDA-AQNSSKAVGEANKTGF 85
A E + LE+ A+ +++ V E ++GF
Sbjct: 844 RAKEGETLEELRARTAAQFVDE--QSGF 869
>gi|354498763|ref|XP_003511483.1| PREDICTED: RNA binding protein fox-1 homolog 2-like [Cricetulus
griseus]
gi|344256440|gb|EGW12544.1| RNA-binding protein 9 [Cricetulus griseus]
Length = 377
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 131 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 185
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 186 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 224
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 225 QADVSLGNEAAVPLSGRGGINTY 247
>gi|21063937|gb|AAM29198.1| AT01764p [Drosophila melanogaster]
Length = 159
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 6 GKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65
G I D L+H GP G RG+AF+ ++ E A A K+ G R + VRLA
Sbjct: 5 GAIEKFDMLFHKGGPMVGQSRGYAFVTFAQNEGATNALLKLDGTSVGNRSIAVRLAKNIK 64
Query: 66 LEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSS 115
++ + + A T G +++++ I AI+ KLK LE ++
Sbjct: 65 YDETQKPKPRLDIPALGT---GKREEKVSKTEAIRAIEAKLKMLERQTDD 111
>gi|82802753|gb|ABB92427.1| PABP3 [Gorilla gorilla]
Length = 630
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|320542071|ref|NP_727783.3| CG14414, isoform D [Drosophila melanogaster]
gi|318069376|gb|AAF48376.5| CG14414, isoform D [Drosophila melanogaster]
Length = 205
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 6 GKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65
G I D L+H GP G RG+AF+ ++ E A A K+ G R + VRLA
Sbjct: 51 GAIEKFDMLFHKGGPMVGQSRGYAFVTFAQNEGATNALLKLDGTSVGNRSIAVRLAKNIK 110
Query: 66 LEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSS 115
++ + + A T G +++++ I AI+ KLK LE ++
Sbjct: 111 YDETQKPKPRLDIPALGT---GKREEKVSKTEAIRAIEAKLKMLERQTDD 157
>gi|219130188|ref|XP_002185253.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403432|gb|EEC43385.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 605
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+ G I S + + K G RGF F+ YST EE+ A +M+G+L +P+ V LA
Sbjct: 347 FAVMGTITSARVM---KDAKDGRSRGFGFVCYSTPEESTRAVNEMNGKLIANKPIFVALA 403
Query: 62 SEKYLEDA---AQNSSKAVG 78
+ + A AQ++++A G
Sbjct: 404 QRREVRRAQLEAQHANRAGG 423
>gi|432097247|gb|ELK27586.1| RNA binding protein fox-1 like protein 2, partial [Myotis davidii]
Length = 367
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 121 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 175
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 176 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 214
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 215 QADVSLGNEAAVPLSGRGGINTY 237
>gi|218201347|gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indica Group]
gi|222640763|gb|EEE68895.1| hypothetical protein OsJ_27729 [Oryza sativa Japonica Group]
Length = 298
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V ++ R + G RGFAF+ Y EEA+ A +++ GR GR ++V+
Sbjct: 35 LFDRYGKVVD---VFIPRDRRTGDSRGFAFVRYKYAEEAQKAIDRLDGRNVDGRNIMVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|297263480|ref|XP_001096930.2| PREDICTED: polyadenylate-binding protein 3 [Macaca mulatta]
Length = 592
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 359 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 413
Query: 62 SEK 64
K
Sbjct: 414 QRK 416
>gi|149066045|gb|EDM15918.1| RNA binding motif protein 9 (predicted), isoform CRA_c [Rattus
norvegicus]
Length = 377
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 131 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 185
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 186 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 224
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 225 QADVSLGNEAAVPLSGRGGINTY 247
>gi|440899695|gb|ELR50961.1| Polyadenylate-binding protein 1-like protein, partial [Bos
grunniens mutus]
Length = 618
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGVITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +GK++S + G RG F F+ + EEA+ A M+GR GR L V
Sbjct: 210 LFSQFGKMLSVKVMRDVSGHSRG----FGFVNFEKHEEAQKAVVNMNGREVSGRLLYVGR 265
Query: 61 ASEK 64
A ++
Sbjct: 266 AQKR 269
>gi|383417509|gb|AFH31968.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 456
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 311 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 365
Query: 62 SEK 64
K
Sbjct: 366 QRK 368
>gi|70947056|ref|XP_743180.1| polyadenylate-binding protein [Plasmodium chabaudi chabaudi]
gi|56522555|emb|CAH74716.1| polyadenylate-binding protein, putative [Plasmodium chabaudi
chabaudi]
Length = 629
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F PYG I S + + +GF F+ + T EEA A +MH ++ G+PL V L
Sbjct: 419 LFEPYGTITSAKVM----KDDKDQSKGFGFVCFGTHEEANKAVTEMHLKIINGKPLYVGL 474
Query: 61 ASEK 64
A ++
Sbjct: 475 AEKR 478
>gi|350408508|ref|XP_003488428.1| PREDICTED: polyadenylate-binding protein 1-like isoform 3 [Bombus
impatiens]
Length = 601
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + + G +GF F+ +S EEA A +M+GR+ +PL V LA
Sbjct: 287 FAPFGTITSAKVMM-----EEGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALA 341
Query: 62 SEK 64
K
Sbjct: 342 QRK 344
>gi|116790938|gb|ABK25797.1| unknown [Picea sitchensis]
Length = 300
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V ++ R + G RGFAF+ Y +EA+ A +++ GR GR ++V+
Sbjct: 35 LFDRYGKVVD---IFIPRDKRTGDSRGFAFVRYKYADEAQKAIDRLDGRNVDGRNIMVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|340719920|ref|XP_003398392.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Bombus
terrestris]
Length = 609
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + + G +GF F+ +S EEA A +M+GR+ +PL V LA
Sbjct: 295 FAPFGTITSAKVMM-----EEGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALA 349
Query: 62 SEK 64
K
Sbjct: 350 QRK 352
>gi|296226907|ref|XP_002759113.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Callithrix jacchus]
Length = 604
Score = 43.5 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 282 FSPFGTITSAKVMM-----EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 336
Query: 62 SEK 64
K
Sbjct: 337 QRK 339
>gi|222629794|gb|EEE61926.1| hypothetical protein OsJ_16667 [Oryza sativa Japonica Group]
Length = 1011
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+IV + G+ +G+ F++YS A A ++M+GRL GR L VR+
Sbjct: 315 LFLPFGQIVRSRVVDDCF---TGLSQGYGFVKYSDPRCASEAIKRMNGRLVEGRALEVRV 371
Query: 61 ASEKYLEDAAQNSSK 75
A ED +Q SK
Sbjct: 372 AGFPSSEDNSQQPSK 386
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 11/65 (16%)
Query: 1 MFSPYGKI----VSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPL 56
+F P+G++ V++D HT G + +G+ F++YS+ A A ++GRL GR +
Sbjct: 410 LFLPFGEVTNAKVAKD---HTTG----LSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKI 462
Query: 57 VVRLA 61
VR++
Sbjct: 463 EVRVS 467
>gi|161016816|ref|NP_001104299.1| RNA binding protein fox-1 homolog 2 isoform 5 [Mus musculus]
gi|56122422|gb|AAV74335.1| Fxh variant 2 [Mus musculus]
Length = 378
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 131 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 185
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 186 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 224
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 225 QADVSLGNEAAVPLSGRGGINTY 247
>gi|161016818|ref|NP_001104300.1| RNA binding protein fox-1 homolog 2 isoform 6 [Mus musculus]
gi|14495356|gb|AAK64287.1|AF387322_1 putative RNA-binding protein fxh [Mus musculus]
gi|56122420|gb|AAV74334.1| Fxh variant 1 [Mus musculus]
gi|116283393|gb|AAH02124.1| Rbm9 protein [Mus musculus]
gi|148697685|gb|EDL29632.1| RNA binding motif protein 9, isoform CRA_a [Mus musculus]
Length = 377
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 131 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 185
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 186 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 224
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 225 QADVSLGNEAAVPLSGRGGINTY 247
>gi|383417507|gb|AFH31967.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|383417511|gb|AFH31969.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 459
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|363754371|ref|XP_003647401.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891038|gb|AET40584.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
Length = 448
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YG I+S H P+ P+GF +++Y++ EEA+ A +K+ G RP+ +
Sbjct: 331 LFKDYGSIISVRIPTH---PETNQPKGFGYVQYASIEEAQKALDKLQGEYIDNRPVRLDF 387
Query: 61 ASEK 64
+S +
Sbjct: 388 SSPR 391
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F G ++S ++ RG +R RG+ ++++ K A+ A ++M G+ GRP+ V ++
Sbjct: 231 FEHIGGVISARVIYE-RGTERS--RGYGYVDFEDKSYAEKAIKEMQGKEIDGRPINVDMS 287
Query: 62 SEKYLEDAAQNSSKAVGEA----NKTGFVGGTSGQMNR 95
+ K + ++ +K G+ + T F+G S +R
Sbjct: 288 TSKPASNPKEDRAKKFGDVPSQPSDTLFLGNLSFNADR 325
>gi|195352604|ref|XP_002042802.1| GM17679 [Drosophila sechellia]
gi|194126833|gb|EDW48876.1| GM17679 [Drosophila sechellia]
Length = 204
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 6 GKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65
G I D L+H GP G RG+AF+ ++ E A A K+ G R + VRLA
Sbjct: 50 GAIEKFDMLFHKGGPMVGQSRGYAFVTFAQNEGATNALLKLDGTSVGNRSIAVRLAKNIK 109
Query: 66 LEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSS 115
++ + + A T G +++++ I AI+ KLK LE ++
Sbjct: 110 YDEMQKPKPRLDIPALGT---GKREEKVSKTEAIRAIEAKLKLLERQTDD 156
>gi|326917956|ref|XP_003205259.1| PREDICTED: polyadenylate-binding protein 1-like [Meleagris
gallopavo]
Length = 652
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 329 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 383
Query: 62 SEK 64
K
Sbjct: 384 QRK 386
>gi|167519406|ref|XP_001744043.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778005|gb|EDQ91621.1| predicted protein [Monosiga brevicollis MX1]
Length = 563
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G I S + G RG F F+ + + +EA A ++MHG + G+PL V LA
Sbjct: 311 FSKFGTITSLKIMTDNNGDSRG----FGFVNFDSADEAAAAIQEMHGSMIDGKPLYVALA 366
Query: 62 SEK 64
K
Sbjct: 367 LRK 369
>gi|161016814|ref|NP_001104298.1| RNA binding protein fox-1 homolog 2 isoform 4 [Mus musculus]
gi|67626082|gb|AAY78494.1| RNA binding protein 9 isoform 1 [Mus musculus]
Length = 381
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 131 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 185
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 186 ATARVMTNKKMVTPYANGW------------------KLSPVVGAVYGPELYAASS---F 224
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 225 QADVSLGNEAAVPLSGRGGINTY 247
>gi|195432797|ref|XP_002064403.1| GK19717 [Drosophila willistoni]
gi|194160488|gb|EDW75389.1| GK19717 [Drosophila willistoni]
Length = 339
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G I+ L R P+ G +GFAFI +++ E + A + M+G+ C RP+ V A
Sbjct: 120 FSAFGVILQTPKL--MRDPETGKSKGFAFINFASFEASDAAMDAMNGQYLCNRPISVSYA 177
Query: 62 SEK 64
+K
Sbjct: 178 FKK 180
>gi|115476996|ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|42408182|dbj|BAD09319.1| putative splicing factor, arginine/serine-rich [Oryza sativa
Japonica Group]
gi|113624063|dbj|BAF24008.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|215693774|dbj|BAG88973.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737273|dbj|BAG96202.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 289
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V ++ R + G RGFAF+ Y EEA+ A +++ GR GR ++V+
Sbjct: 35 LFDRYGKVVD---VFIPRDRRTGDSRGFAFVRYKYAEEAQKAIDRLDGRNVDGRNIMVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|195566734|ref|XP_002106931.1| GD17174 [Drosophila simulans]
gi|194204327|gb|EDX17903.1| GD17174 [Drosophila simulans]
Length = 204
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 6 GKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65
G I D L+H GP G RG+AF+ ++ E A A K+ G R + VRLA
Sbjct: 50 GAIEKFDMLFHKGGPMVGQSRGYAFVTFAQNEGATNALLKLDGTSVGNRSIAVRLAKNIK 109
Query: 66 LEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSS 115
++ + + A T G +++++ I AI+ KLK LE ++
Sbjct: 110 YDEMQKPKPRLDIPALGT---GKREEKVSKTEAIRAIEAKLKLLERQTDD 156
>gi|170083917|ref|XP_001873182.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650734|gb|EDR14974.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 448
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ +F+ R P G +G+AF++Y E+A++A E+M G GR L V
Sbjct: 241 VFEPFGEL---EFVDLHRDPMTGRSKGYAFVQYKRSEDARMALEQMEGFELAGRTLRVNT 297
Query: 61 ASEKYLEDAAQNSS 74
EK Q S
Sbjct: 298 VHEKGTARYTQQDS 311
>gi|389595349|ref|XP_003722897.1| polyadenylate-binding protein 1 [Leishmania major strain Friedlin]
gi|323364125|emb|CBZ13132.1| polyadenylate-binding protein 1 [Leishmania major strain Friedlin]
Length = 560
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YG++ S + GV RGF F+ +S +EA A +M+GR+ G+PL+V +
Sbjct: 326 LFKEYGEVKS----CRVMVSESGVSRGFGFVSFSNADEANAALREMNGRMLNGKPLIVNI 381
Query: 61 ASEK 64
A +
Sbjct: 382 AQRR 385
>gi|225156280|ref|ZP_03724758.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
gi|224803012|gb|EEG21257.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
Length = 106
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS G + ++ FL R + G PRGFAF+ + T EE++LA EK++G GR + V A
Sbjct: 23 FSTCGTL-TDVFLATDR--ETGRPRGFAFVTFDTAEESQLATEKLNGTDLGGRAITVNEA 79
Query: 62 SEK 64
K
Sbjct: 80 RPK 82
>gi|26336927|dbj|BAC32147.1| unnamed protein product [Mus musculus]
Length = 349
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 131 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 185
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 186 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 224
Query: 121 QADNSSCNGSLNCLSGKDGLNN 142
QAD S N + LSG+ G+N
Sbjct: 225 QADVSLGNEAAVPLSGRGGINT 246
>gi|189234753|ref|XP_974490.2| PREDICTED: similar to STE20-like kinase (yeast) [Tribolium
castaneum]
Length = 1819
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
F P+G I S + W P +GFAF+EY E A+LA E+M+G + GR + V
Sbjct: 118 FLPFGPIKSINMSW---DPVTQKHKGFAFVEYEIPEAAQLALEQMNGVMIGGRNIKV 171
>gi|397502367|ref|XP_003821832.1| PREDICTED: polyadenylate-binding protein 1 [Pan paniscus]
Length = 656
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 334 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 388
Query: 62 SEK 64
K
Sbjct: 389 QRK 391
>gi|237839061|ref|XP_002368828.1| RNA recognition motif-containing protein [Toxoplasma gondii ME49]
gi|211966492|gb|EEB01688.1| RNA recognition motif-containing protein [Toxoplasma gondii ME49]
Length = 754
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 21/135 (15%)
Query: 1 MFSPYGKIVSEDFLWHTRGPK--RGVP---------RGFAFIEYSTKEEAKLAKEKMHGR 49
+F P G IV P+ R +P RG AFIE++ +++A+ A E + GR
Sbjct: 356 LFGPVGPIVDVSL------PQIDRAIPNDSEDAFAVRGIAFIEFADRKDARTALE-LSGR 408
Query: 50 LACGRPLVVRLASEKYLEDAAQNSSKAVGEAN-KTGFVGGTSGQMNRSAKIAAIKNKLKA 108
CGRP+ V A+ E A Q S +GE + FV TS + +
Sbjct: 409 HLCGRPITVNYANLTKEERAVQ--SALLGEEKCLSSFVPATSKTFEHPTQRSLHTGTNLD 466
Query: 109 LEEESSSAKKQKQAD 123
L EE + +K++ + D
Sbjct: 467 LSEEFADSKRRSRWD 481
>gi|380019828|ref|XP_003693803.1| PREDICTED: polyadenylate-binding protein 1-like [Apis florea]
Length = 630
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + + G +GF F+ +S EEA A +M+GR+ +PL V LA
Sbjct: 316 FAPFGTITSAKVMM-----EEGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALA 370
Query: 62 SEK 64
K
Sbjct: 371 QRK 373
>gi|218195846|gb|EEC78273.1| hypothetical protein OsI_17967 [Oryza sativa Indica Group]
Length = 1001
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+IV + G+ +G+ F++YS A A ++M+GRL GR L VR+
Sbjct: 316 LFLPFGQIVRSRVVDDCF---TGLSQGYGFVKYSDPRCASEAIKRMNGRLVEGRALEVRV 372
Query: 61 ASEKYLEDAAQNSSK 75
A ED +Q SK
Sbjct: 373 AGFPSSEDNSQQPSK 387
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 11/65 (16%)
Query: 1 MFSPYGKI----VSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPL 56
+F P+G++ V++D HT G + +G+ F++YS+ A A ++GRL GR +
Sbjct: 411 LFLPFGEVTNAKVAKD---HTTG----LSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKI 463
Query: 57 VVRLA 61
VR++
Sbjct: 464 EVRVS 468
>gi|217073798|gb|ACJ85259.1| unknown [Medicago truncatula]
Length = 280
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V + F+ R + G RGFAF+ Y +EA A +++ GR+ GR + V+
Sbjct: 35 LFDKYGKVV-DIFIPKDR--RTGESRGFAFVRYKYADEASKAVDRLDGRMVDGREITVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|3334756|emb|CAA76346.1| putative arginine/serine-rich splicing factor [Medicago sativa
subsp. x varia]
Length = 286
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V + F+ R + G RGFAF+ Y +EA A +++ GR+ GR + V+
Sbjct: 35 LFDKYGKVV-DIFIPKDR--RTGESRGFAFVRYKYADEASKAVDRLDGRMVDGREITVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|221502126|gb|EEE27870.1| glycine-rich RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 763
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 21/135 (15%)
Query: 1 MFSPYGKIVSEDFLWHTRGPK--RGVP---------RGFAFIEYSTKEEAKLAKEKMHGR 49
+F P G IV P+ R +P RG AFIE++ +++A+ A E + GR
Sbjct: 356 LFGPVGPIVDVSL------PQIDRAIPNDSEDAFAVRGIAFIEFADRKDARTALE-LSGR 408
Query: 50 LACGRPLVVRLASEKYLEDAAQNSSKAVGEAN-KTGFVGGTSGQMNRSAKIAAIKNKLKA 108
CGRP+ V A+ E A Q S +GE + FV TS + +
Sbjct: 409 HLCGRPITVNYANLTKEERAVQ--SALLGEEKCLSSFVPATSKTFEHPTQRSLHTGTNLD 466
Query: 109 LEEESSSAKKQKQAD 123
L EE + +K++ + D
Sbjct: 467 LSEEFADSKRRSRWD 481
>gi|62529140|gb|AAX84842.1| RNA binding motif protein 9 [Mus musculus]
Length = 427
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 181 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 235
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 236 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 274
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 275 QADVSLGNEAAVPLSGRGGINTY 297
>gi|427794969|gb|JAA62936.1| Putative polypyrimidine tract-binding protein puf60 rrm
superfamily, partial [Rhipicephalus pulchellus]
Length = 416
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGR 54
F P+G I S + W K +GFAF+EY E A+LA E+M+G L GR
Sbjct: 174 FRPFGPIKSINMSWDPVTQKH---KGFAFVEYELPEAAQLALEQMNGVLIGGR 223
>gi|353229125|emb|CCD75296.1| putative fuse-binding protein-interacting repressor siahbp1
[Schistosoma mansoni]
Length = 520
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 9/61 (14%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHG------RLACGR 54
+FSP+G I S + W K +GFAF+E+ E A+LA ++M+G +L GR
Sbjct: 114 VFSPFGPIKSVNLSWDPSTQKH---KGFAFLEFEYPEAAQLAIDQMNGTSFGGRQLKVGR 170
Query: 55 P 55
P
Sbjct: 171 P 171
>gi|350408504|ref|XP_003488426.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Bombus
impatiens]
Length = 630
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + + G +GF F+ +S EEA A +M+GR+ +PL V LA
Sbjct: 316 FAPFGTITSAKVMM-----EEGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALA 370
Query: 62 SEK 64
K
Sbjct: 371 QRK 373
>gi|256072869|ref|XP_002572756.1| fuse-binding protein-interacting repressor siahbp1 [Schistosoma
mansoni]
Length = 520
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 9/61 (14%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHG------RLACGR 54
+FSP+G I S + W K +GFAF+E+ E A+LA ++M+G +L GR
Sbjct: 114 VFSPFGPIKSVNLSWDPSTQKH---KGFAFLEFEYPEAAQLAIDQMNGTSFGGRQLKVGR 170
Query: 55 P 55
P
Sbjct: 171 P 171
>gi|90399074|emb|CAJ86296.1| H0124B04.13 [Oryza sativa Indica Group]
Length = 913
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G+IV + G+ +G+ F++YS A A ++M+GRL GR L VR+
Sbjct: 228 LFLPFGQIVRSRVVDDCF---TGLSQGYGFVKYSDPRCASEAIKRMNGRLVEGRALEVRV 284
Query: 61 ASEKYLEDAAQNSSK 75
A ED +Q SK
Sbjct: 285 AGFPSSEDNSQQPSK 299
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 11/65 (16%)
Query: 1 MFSPYGKI----VSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPL 56
+F P+G++ V++D HT G + +G+ F++YS+ A A ++GRL GR +
Sbjct: 323 LFLPFGEVTNAKVAKD---HTTG----LSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKI 375
Query: 57 VVRLA 61
VR++
Sbjct: 376 EVRVS 380
>gi|384251873|gb|EIE25350.1| polyadenylate binding protein [Coccomyxa subellipsoidea C-169]
Length = 681
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + + G +G F F+ YS+ EEA A +M+G++ G+P+ V LA
Sbjct: 336 FAPHGTITSAKVMKDSAGKSKG----FGFVCYSSPEEATRAVTEMNGKMLLGKPMYVALA 391
Query: 62 SEK 64
+
Sbjct: 392 QRR 394
>gi|350408506|ref|XP_003488427.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Bombus
impatiens]
Length = 621
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + + G +GF F+ +S EEA A +M+GR+ +PL V LA
Sbjct: 316 FAPFGTITSAKVMM-----EEGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALA 370
Query: 62 SEK 64
K
Sbjct: 371 QRK 373
>gi|342319853|gb|EGU11798.1| RNA-binding protein Cwf29 [Rhodotorula glutinis ATCC 204091]
Length = 300
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
+FS YG+IV + R P+ G PRGFA++ Y+ + LA + ++G GR L V
Sbjct: 50 IFSQYGEIVDINM---PRDPQTGKPRGFAWLMYADQRSTVLAVDNLNGAQVLGRTLRV 104
>gi|297738037|emb|CBI27238.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGP-KRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVR 59
+FSP+G+I S R P K G RGFAF+E+ TK+EA+ A + + GR LV+
Sbjct: 665 LFSPFGQIKS------LRLPMKFGSHRGFAFVEFVTKQEAQNALQALSSTHLYGRHLVME 718
Query: 60 LASE 63
A E
Sbjct: 719 RAKE 722
>gi|197097606|ref|NP_001126097.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|55730342|emb|CAH91893.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRVVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|354476610|ref|XP_003500517.1| PREDICTED: polyadenylate-binding protein 1-like [Cricetulus
griseus]
Length = 637
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 324 FSPFGTITSAKVTM-----EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 378
Query: 62 SEK 64
K
Sbjct: 379 QRK 381
>gi|213510736|ref|NP_001133148.1| cold inducible RNA binding protein [Salmo salar]
gi|197632151|gb|ACH70799.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219968|gb|ACM08645.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|221221054|gb|ACM09188.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 154
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS YG I D + + G PRGF F++Y E+AK A E M+G+ GR + V A
Sbjct: 25 FSKYGNIAKCDVIMDR---ETGRPRGFGFVKYDNAEDAKDAMEGMNGQSLDGRTIRVNEA 81
>gi|196013113|ref|XP_002116418.1| hypothetical protein TRIADDRAFT_30761 [Trichoplax adhaerens]
gi|190581009|gb|EDV21088.1| hypothetical protein TRIADDRAFT_30761, partial [Trichoplax
adhaerens]
Length = 102
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G I S + ++G +GF F+ ++T+EEA A +M GR+ +PL V A
Sbjct: 27 FSKFGSITSAKVMC----DEKGASKGFGFVCFATQEEASKAINEMSGRIIVSKPLYVTFA 82
Query: 62 SEK 64
K
Sbjct: 83 QRK 85
>gi|353227476|emb|CCA77984.1| related to mRNA polyadenylate-binding protein PAB1 [Piriformospora
indica DSM 11827]
Length = 693
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F PYG I S + +GV +GF F+ +ST +EA A +M+ ++ +PL V LA
Sbjct: 417 FEPYGTITSSKIMRD----DKGVSKGFGFVCFSTPDEATRAIAEMNNKMIGSKPLYVSLA 472
Query: 62 SEKYLE------DAAQNSSKAVGEANKTGFVGGTSGQM 93
+ + +Q + + +A G G +G M
Sbjct: 473 QRRDVRRQQLESQISQRNQIRMQQAAAAGLTGYINGPM 510
>gi|301125993|ref|XP_002909814.1| polyadenylate-binding protein, putative [Phytophthora infestans
T30-4]
gi|262103703|gb|EEY61755.1| polyadenylate-binding protein, putative [Phytophthora infestans
T30-4]
Length = 587
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+ G I S + R P G RGF F+ +ST EEA A +M+G+L G+P+ V LA
Sbjct: 298 FAECGTITSSRVM---RDPN-GNSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALA 353
Query: 62 SEKYLEDA---AQNSSKAVG 78
K + A AQ++ + G
Sbjct: 354 QRKEVRRAQLEAQHAQQRAG 373
>gi|301120388|ref|XP_002907921.1| polyadenylate-binding protein 1-B [Phytophthora infestans T30-4]
gi|262102952|gb|EEY61004.1| polyadenylate-binding protein 1-B [Phytophthora infestans T30-4]
Length = 640
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+ G I S + R P G RGF F+ +ST EEA A +M+G+L G+P+ V LA
Sbjct: 352 FAECGTITSSRVM---RDPN-GNSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALA 407
Query: 62 SEKYLEDA---AQNSSKAVG 78
K + A AQ++ + G
Sbjct: 408 QRKEVRRAQLEAQHAQQRAG 427
>gi|169626491|ref|XP_001806645.1| hypothetical protein SNOG_16535 [Phaeosphaeria nodorum SN15]
gi|160706106|gb|EAT76075.2| hypothetical protein SNOG_16535 [Phaeosphaeria nodorum SN15]
Length = 321
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +G++ S ++ RG+ RGF ++E+ + ++A+ A + + ++ GR LVV+
Sbjct: 148 VFSRFGEVASVKIVYD----NRGMSRGFGYVEFKSIDDAQTAIDNLDMQVFEGRNLVVQY 203
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQM 93
K D + +KT F+G S +M
Sbjct: 204 HRAKSDSDRPKREFPPANLPSKTLFIGNMSFEM 236
>gi|157818977|ref|NP_001099678.1| poly(A) binding protein, cytoplasmic 6 [Rattus norvegicus]
gi|149027506|gb|EDL83096.1| similar to RIKEN cDNA 4932702K14 (predicted) [Rattus norvegicus]
gi|197246058|gb|AAI68959.1| Poly(A) binding protein, cytoplasmic 3 [Rattus norvegicus]
Length = 643
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 324 FSPFGTITSAKVTM-----EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 378
Query: 62 SEK 64
K
Sbjct: 379 QRK 381
>gi|359472780|ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-like [Vitis vinifera]
Length = 983
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGP-KRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVR 59
+FSP+G+I S R P K G RGFAF+E+ TK+EA+ A + + GR LV+
Sbjct: 881 LFSPFGQIKS------LRLPMKFGSHRGFAFVEFVTKQEAQNALQALSSTHLYGRHLVME 934
Query: 60 LASE 63
A E
Sbjct: 935 RAKE 938
>gi|270009354|gb|EFA05802.1| hypothetical protein TcasGA2_TC030646 [Tribolium castaneum]
Length = 212
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 11/76 (14%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA--CGRPLVV 58
+FS YG+I+ + L + G+PRG AF+ +S EEAK A + G+L PL V
Sbjct: 132 LFSNYGEIIQKSVL---KDKITGMPRGVAFVRFSRGEEAKAAIADLDGKLLENAMLPLSV 188
Query: 59 RLASE------KYLED 68
R+A + +YLE+
Sbjct: 189 RVAEDHGRQKAQYLEN 204
>gi|119612220|gb|EAW91814.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_a [Homo
sapiens]
Length = 287
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 64 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 118
Query: 62 SEK 64
K
Sbjct: 119 QRK 121
>gi|390342940|ref|XP_001198098.2| PREDICTED: RNA-binding protein 39-like [Strongylocentrotus
purpuratus]
Length = 666
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI + + T + +G+ FI + E+AK A ++++G GRP+ V
Sbjct: 324 IFEPFGKIDNIQLMMDTDANRS---KGYGFITFHDAEDAKRALDQLNGFELAGRPMKVNH 380
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ + S E +K G T+G++ AK+A
Sbjct: 381 VTERNEQGQQAPSFLDSEELDKRGITLNTTGRLQLMAKLA 420
>gi|340719918|ref|XP_003398391.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Bombus
terrestris]
Length = 630
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + + G +GF F+ +S EEA A +M+GR+ +PL V LA
Sbjct: 316 FAPFGTITSAKVMM-----EEGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALA 370
Query: 62 SEK 64
K
Sbjct: 371 QRK 373
>gi|302142286|emb|CBI19489.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +G I S + R P G+ RG F+ +ST EEA A +M+G++ +PL V L
Sbjct: 319 LFSEFGTITSCKVM---RDPS-GISRGSGFVAFSTSEEASRALTEMNGKMVVSKPLYVAL 374
Query: 61 ASEK 64
A K
Sbjct: 375 AQRK 378
>gi|255538240|ref|XP_002510185.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550886|gb|EEF52372.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 658
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +G I S + R P G+ RG F+ +ST EEA A +M+G++ +PL V L
Sbjct: 337 LFSDFGMITSCKVM---RDPS-GISRGSGFVAFSTPEEASRALAEMNGKMVVSKPLYVAL 392
Query: 61 ASEK 64
A K
Sbjct: 393 AQRK 396
>gi|149244358|ref|XP_001526722.1| polyadenylate-binding protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|158514320|sp|A5DW14.1|PABP_LODEL RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|146449116|gb|EDK43372.1| polyadenylate-binding protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 661
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F P+G I S + G +G F F+ +ST EEA A +M+ R+ G+PL V LA
Sbjct: 371 FKPFGTITSSKVMVDDAGKSKG----FGFVCFSTPEEATKAITEMNQRMVNGKPLYVALA 426
Query: 62 SEK 64
K
Sbjct: 427 QRK 429
>gi|407410696|gb|EKF33036.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 477
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F+PYG+I+S + R G G AF+ Y+T EEA A E M G+ GR + V+
Sbjct: 134 LFAPYGQILSAAVM---RNIHTGNSLGTAFVRYATTEEAMRAIEGMSGKRIGGRAIAVQW 190
Query: 61 ASEKYLEDAAQNSSKAVGEANK 82
A + Q+ VGEA K
Sbjct: 191 AKK-------QHDYAPVGEARK 205
>gi|119494703|ref|XP_001264168.1| RNA splicing factor (Pad-1), putative [Neosartorya fischeri NRRL
181]
gi|119412330|gb|EAW22271.1| RNA splicing factor (Pad-1), putative [Neosartorya fischeri NRRL
181]
Length = 566
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 65/130 (50%), Gaps = 6/130 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ +F+ + + G +G+ F+++ +A+ A EKM+G GR + V L
Sbjct: 294 VFEPFGEL---EFVQLQKD-EAGRSKGYGFVQFRDPNQAREALEKMNGFDLAGRAIRVGL 349
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGT-SGQMNRSAKIAAIKNKLKALEEESSSAKKQ 119
++K+ D++ S++ G AN+ F G + SGQ R + N +A +S
Sbjct: 350 GNDKFTPDSSAQRSQSHG-ANQPNFQGSSFSGQGGRGIQAGGTSNFDRAGGRDSEKGAGA 408
Query: 120 KQADNSSCNG 129
D++ G
Sbjct: 409 SALDDTDVAG 418
>gi|409051610|gb|EKM61086.1| hypothetical protein PHACADRAFT_247456 [Phanerochaete carnosa
HHB-10118-sp]
Length = 584
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ +F+ R P G +G+AF++Y E+AK+A E+M G GR L V
Sbjct: 377 VFEPFGEL---EFVDLHRDPMTGRSKGYAFVQYKRGEDAKMALEQMEGFELAGRTLRVNT 433
Query: 61 ASEK 64
EK
Sbjct: 434 VHEK 437
>gi|340719922|ref|XP_003398393.1| PREDICTED: polyadenylate-binding protein 1-like isoform 3 [Bombus
terrestris]
Length = 621
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + + G +GF F+ +S EEA A +M+GR+ +PL V LA
Sbjct: 316 FAPFGTITSAKVMM-----EEGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALA 370
Query: 62 SEK 64
K
Sbjct: 371 QRK 373
>gi|170057956|ref|XP_001864710.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
gi|167877220|gb|EDS40603.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
Length = 661
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGR 54
F P+G I S + W K +GFAF+EY E A+LA E+M+G + GR
Sbjct: 193 FLPFGPIKSINMSWDPITQKH---KGFAFVEYEIPEGAQLALEQMNGAMLGGR 242
>gi|70996384|ref|XP_752947.1| RNA splicing factor (Pad-1) [Aspergillus fumigatus Af293]
gi|66850582|gb|EAL90909.1| RNA splicing factor (Pad-1), putative [Aspergillus fumigatus Af293]
gi|159131701|gb|EDP56814.1| RNA splicing factor (Pad-1), putative [Aspergillus fumigatus A1163]
Length = 566
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 65/130 (50%), Gaps = 6/130 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ +F+ + + G +G+ F+++ +A+ A EKM+G GR + V L
Sbjct: 294 VFEPFGEL---EFVQLQKD-EAGRSKGYGFVQFRDPNQAREALEKMNGFDLAGRAIRVGL 349
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGT-SGQMNRSAKIAAIKNKLKALEEESSSAKKQ 119
++K+ D++ S++ G AN+ F G + SGQ R + N +A +S
Sbjct: 350 GNDKFTPDSSAQRSQSHG-ANQPNFQGSSFSGQGGRGIQAGGTSNFDRAGGRDSEKGAGA 408
Query: 120 KQADNSSCNG 129
D++ G
Sbjct: 409 SALDDTDVAG 418
>gi|383862671|ref|XP_003706807.1| PREDICTED: polyadenylate-binding protein 1-like isoform 3
[Megachile rotundata]
Length = 601
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + G +GF F+ +S EEA A +M+GR+ +PL V LA
Sbjct: 287 FAPFGTITSAKVMMED-----GRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALA 341
Query: 62 SEK 64
K
Sbjct: 342 QRK 344
>gi|389603137|ref|XP_001568596.2| putative polyadenylate-binding protein 1 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505742|emb|CAM43715.2| putative polyadenylate-binding protein 1 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 554
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YG + S + + G RGF F+ +S +EA A +M+GR+ G+PL+V +
Sbjct: 326 LFKEYGDVKSCRVMM----SESGASRGFGFVSFSNADEANAALREMNGRMLNGKPLIVNI 381
Query: 61 ASEK 64
A +
Sbjct: 382 AQRR 385
>gi|120586965|ref|NP_001073364.1| RNA binding protein fox-1 homolog 2 [Rattus norvegicus]
gi|166918685|sp|A1A5R1.1|RFOX2_RAT RecName: Full=RNA binding protein fox-1 homolog 2; AltName:
Full=Fox-1 homolog B; AltName: Full=RNA-binding motif
protein 9; AltName: Full=RNA-binding protein 9
gi|118764384|gb|AAI28767.1| RNA binding motif protein 9 [Rattus norvegicus]
Length = 432
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 182 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 236
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 237 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 275
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + LSG+ G+N
Sbjct: 276 QADVSLGNEAAVPLSGRGGINTY 298
>gi|82595449|ref|XP_725855.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481012|gb|EAA17420.1| polyA binding protein-related [Plasmodium yoelii yoelii]
Length = 859
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F PYG I S + + +G F F+ + T EEA A +MH ++ G+PL V L
Sbjct: 429 LFEPYGTITSAKVMKDDKDQSKG----FGFVCFGTHEEANKAVTEMHLKIINGKPLYVGL 484
Query: 61 ASEK 64
A ++
Sbjct: 485 AEKR 488
>gi|62122939|ref|NP_001014392.1| RNA binding motif protein 39b [Danio rerio]
gi|61402832|gb|AAH91794.1| RNA binding motif protein 39b [Danio rerio]
Length = 539
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI + + + G +G+ FI ++ E AK A E+++G GRP+ V
Sbjct: 283 IFEPFGKIEGIQLMMDS---ETGRSKGYGFISFADAECAKKALEQLNGFELAGRPMKVGH 339
Query: 61 ASEKYLEDAAQNSSKAVG-EANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 340 VTER--SDASSASSFLDNDELERTGIDLGTTGRLQLMARLA 378
>gi|402907592|ref|XP_003916555.1| PREDICTED: RNA binding protein fox-1 homolog 1-like [Papio anubis]
Length = 211
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 138 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 192
Query: 61 ASEKYL 66
A+ + +
Sbjct: 193 ATARVM 198
>gi|357150983|ref|XP_003575643.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 108
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FSP+G I + R + G P+GF F++YS++ A+ A + M GR+ GR + V
Sbjct: 45 IFSPFGAIEEARLM---RDNQTGRPKGFGFVKYSSQVAAEKAVKAMDGRIIRGRIIFVET 101
Query: 61 ASEK 64
A E+
Sbjct: 102 AKER 105
>gi|242041385|ref|XP_002468087.1| hypothetical protein SORBIDRAFT_01g039310 [Sorghum bicolor]
gi|241921941|gb|EER95085.1| hypothetical protein SORBIDRAFT_01g039310 [Sorghum bicolor]
Length = 654
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+ YG I S + +G+ RGF F+ YST EEAK M G + G+PL V +
Sbjct: 343 FAEYGNITSAKVMRD----DKGISRGFGFVCYSTPEEAKSVVNSMRGVMFFGKPLYVAIF 398
Query: 62 SEK 64
K
Sbjct: 399 QRK 401
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G IVS + R P G GF F+ + E A A+E MHG L + L V A
Sbjct: 240 FSQFGPIVSVKIM---RRPD-GSSLGFGFVSFQNPESAIKAQETMHGMLLGSKALYVARA 295
Query: 62 SEK 64
+K
Sbjct: 296 QKK 298
>gi|165875543|gb|ABY68599.1| poly(A) binding protein cytoplasmic 1 [Ovis aries]
Length = 289
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 31 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 85
Query: 62 SEK 64
K
Sbjct: 86 QRK 88
>gi|405118918|gb|AFR93691.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. grubii H99]
Length = 752
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 49/113 (43%), Gaps = 25/113 (22%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVP--------RGFAFIEYSTKEEAKLAKEKMHGRLAC 52
+FS YG++ S R P++ VP RGFAF+E++T EA A E +
Sbjct: 642 LFSAYGQLKS------LRLPRKAVPTSTGAQSTRGFAFLEFTTHTEAARAMEALKHTHLL 695
Query: 53 GRPLVVRLASEKYLEDAAQNSSKAVGEA-----------NKTGFVGGTSGQMN 94
GR LV++ A+E D K GE K F GG +MN
Sbjct: 696 GRHLVLQWANEGEEVDVKGLREKVKGEVRGMESGGDRKRRKLDFKGGKEDEMN 748
>gi|402901594|ref|XP_003913731.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 636
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMM-----EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|323510419|dbj|BAJ78103.1| cgd6_3010 [Cryptosporidium parvum]
Length = 365
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF P+G + S + + GV RGF F+ + + +EA A +MH +L G+PL V L
Sbjct: 1 MFEPFGTVSSVSI----KTDESGVSRGFGFVSFLSPDEATKAITEMHLKLVRGKPLYVGL 56
Query: 61 ASEK 64
K
Sbjct: 57 HERK 60
>gi|440577321|emb|CCI55328.1| PH01B001I13.24 [Phyllostachys edulis]
Length = 196
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F +G++ +E L R KR PRGFAF+ Y+ +EE+K A E MHG+ GR + V +A
Sbjct: 136 FERFGQL-TEVNLVMDRVAKR--PRGFAFLSYANEEESKNAMEGMHGKFLDGRVIFVEVA 192
Query: 62 SEK 64
K
Sbjct: 193 KRK 195
>gi|312374824|gb|EFR22303.1| hypothetical protein AND_15459 [Anopheles darlingi]
Length = 560
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI + + T G +G+ FI + ++AK A E+++G GRP+ V
Sbjct: 322 IFEPFGKIDNIQLIMDT---DTGRSKGYGFITFHNADDAKKALEQLNGFELAGRPMKVGN 378
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ D ++S E +++G G +G++ K+A
Sbjct: 379 VTERL--DVTTHASLDTDEMDRSGIELGATGRLQLMFKLA 416
>gi|68070939|ref|XP_677383.1| polyadenylate-binding protein [Plasmodium berghei strain ANKA]
gi|56497479|emb|CAH95361.1| polyadenylate-binding protein, putative [Plasmodium berghei]
Length = 833
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F PYG I S + + +G F F+ + T EEA A +MH ++ G+PL V L
Sbjct: 426 LFEPYGTITSAKVMKDDKDQSKG----FGFVCFGTHEEANKAVTEMHLKIINGKPLYVGL 481
Query: 61 ASEK 64
A ++
Sbjct: 482 AEKR 485
>gi|388519919|gb|AFK48021.1| unknown [Medicago truncatula]
Length = 281
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V + F+ R + G RGFAF+ Y +EA A +++ GR+ GR + V+
Sbjct: 35 LFDKYGKVV-DIFIPKDR--RTGESRGFAFVRYKYADEASKAVDRLDGRMVDGREITVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|414867082|tpg|DAA45639.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 216
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK++ ++ R + G PRGFAF+ Y+ ++EA+ A + + G GR L+V+
Sbjct: 35 LFDRYGKVLD---IYIPRDHRTGDPRGFAFVRYNYEDEAQDAIDGLDGMRFDGRALMVQF 91
Query: 61 ASEKYLEDAAQNSSKAVGEAN 81
A KY +A + + E N
Sbjct: 92 A--KYGPNAEKIHRGRITEEN 110
>gi|410978999|ref|XP_003995874.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein 18
[Felis catus]
Length = 187
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 5 YGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLAS-- 62
+G + DFL+H + F+ + TK+EA+ A + ++G+LA + LVVR A
Sbjct: 48 FGTVKQFDFLFHXXXXXXX---XYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQ 104
Query: 63 -EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEE 111
++Y D +N + T ++ +AKI AI+ KLK + E
Sbjct: 105 VKRY--DHNKNDKILPISLEPSSSTEPTQSNLSVTAKIKAIEAKLKMMAE 152
>gi|386780450|dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 657
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +G I S + R P G+ RG F+ +ST EEA A +M+G++ +PL V L
Sbjct: 339 LFSEFGTITSCKVM---RDPS-GISRGSGFVAFSTSEEASRALSEMNGKMIVSKPLYVAL 394
Query: 61 ASEK 64
A K
Sbjct: 395 AQRK 398
>gi|432095458|gb|ELK26654.1| Polyadenylate-binding protein 4 [Myotis davidii]
Length = 657
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I + + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 310 FSPFGSITRAEVMLED-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 364
Query: 62 SEK 64
K
Sbjct: 365 QRK 367
>gi|332030569|gb|EGI70257.1| Polyadenylate-binding protein 1 [Acromyrmex echinatior]
Length = 657
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + + G +GF F+ +S EEA A +M+GR+ +PL V LA
Sbjct: 338 FTPFGTITSAKVMM-----EEGRSKGFGFVCFSQPEEATKAVTEMNGRIVGSKPLYVALA 392
Query: 62 SEK 64
K
Sbjct: 393 QRK 395
>gi|225458678|ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147773643|emb|CAN76464.1| hypothetical protein VITISV_017035 [Vitis vinifera]
Length = 640
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +G I S + R P G+ RG F+ +ST EEA A +M+G++ +PL V L
Sbjct: 319 LFSEFGTITSCKVM---RDPS-GISRGSGFVAFSTSEEASRALTEMNGKMVVSKPLYVAL 374
Query: 61 ASEK 64
A K
Sbjct: 375 AQRK 378
>gi|189237575|ref|XP_974855.2| PREDICTED: similar to splicing factor [Tribolium castaneum]
Length = 501
Score = 43.1 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI D + P+ G +G+ FI + E+AK A E+++G GRP+ V
Sbjct: 260 IFEPFGKI---DNIQLIMDPETGRSKGYGFIAFRNCEDAKKALEQLNGFELAGRPMKVGN 316
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ S E +++G G +G++ K+A
Sbjct: 317 VTERLDLQQQGPSILDSDELDRSGIDLGATGRLQLMFKLA 356
>gi|431905230|gb|ELK10275.1| RNA-binding protein 9 [Pteropus alecto]
Length = 552
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 306 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 360
Query: 61 ASEKYLEDAAQNSSKAVG 78
A+ + + + + A G
Sbjct: 361 ATARVMTNKKMVTPYANG 378
>gi|47223170|emb|CAG11305.1| unnamed protein product [Tetraodon nigroviridis]
Length = 515
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI + + + G +G+ FI ++ E AK A E+++G GRP+ V
Sbjct: 263 IFEPFGKIEGIQLMMDS---ETGRSKGYGFISFADAECAKKALEQLNGFELAGRPMKVGH 319
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ + + +S E +TG GT+G++ A++A
Sbjct: 320 VTERS-DSSTASSILDNDELERTGIDLGTTGRLQLMARLA 358
>gi|414867083|tpg|DAA45640.1| TPA: hypothetical protein ZEAMMB73_077445 [Zea mays]
gi|448878222|gb|AGE46074.1| arginine/serine-rich splicing factor SC26 transcript III [Zea mays]
Length = 198
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK++ ++ R + G PRGFAF+ Y+ ++EA+ A + + G GR L+V+
Sbjct: 35 LFDRYGKVLD---IYIPRDHRTGDPRGFAFVRYNYEDEAQDAIDGLDGMRFDGRALMVQF 91
Query: 61 ASEKYLEDAAQNSSKAVGEAN 81
A KY +A + + E N
Sbjct: 92 A--KYGPNAEKIHRGRITEEN 110
>gi|307165845|gb|EFN60208.1| Polyadenylate-binding protein 1 [Camponotus floridanus]
Length = 635
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + + G +GF F+ +S EEA A +M+GR+ +PL V LA
Sbjct: 316 FTPFGTITSAKVMM-----EEGRSKGFGFVCFSQPEEATKAVTEMNGRIVGSKPLYVALA 370
Query: 62 SEK 64
K
Sbjct: 371 QRK 373
>gi|24655233|ref|NP_728610.1| poly U binding factor 68kD, isoform B [Drosophila melanogaster]
gi|24655237|ref|NP_728611.1| poly U binding factor 68kD, isoform C [Drosophila melanogaster]
gi|24655242|ref|NP_728612.1| poly U binding factor 68kD, isoform D [Drosophila melanogaster]
gi|281365434|ref|NP_001163315.1| poly U binding factor 68kD, isoform E [Drosophila melanogaster]
gi|281365436|ref|NP_001163316.1| poly U binding factor 68kD, isoform F [Drosophila melanogaster]
gi|281365438|ref|NP_001163317.1| poly U binding factor 68kD, isoform G [Drosophila melanogaster]
gi|281365440|ref|NP_001163318.1| poly U binding factor 68kD, isoform H [Drosophila melanogaster]
gi|281365442|ref|NP_001163319.1| poly U binding factor 68kD, isoform I [Drosophila melanogaster]
gi|281365444|ref|NP_001163320.1| poly U binding factor 68kD, isoform J [Drosophila melanogaster]
gi|7292089|gb|AAF47502.1| poly U binding factor 68kD, isoform C [Drosophila melanogaster]
gi|10727221|gb|AAG22221.1| poly U binding factor 68kD, isoform B [Drosophila melanogaster]
gi|16768670|gb|AAL28554.1| HL02140p [Drosophila melanogaster]
gi|23092776|gb|AAG22222.2| poly U binding factor 68kD, isoform D [Drosophila melanogaster]
gi|27820105|gb|AAO25077.1| GH01086p [Drosophila melanogaster]
gi|220953270|gb|ACL89178.1| pUf68-PB [synthetic construct]
gi|272454997|gb|ACZ94587.1| poly U binding factor 68kD, isoform E [Drosophila melanogaster]
gi|272454998|gb|ACZ94588.1| poly U binding factor 68kD, isoform F [Drosophila melanogaster]
gi|272454999|gb|ACZ94589.1| poly U binding factor 68kD, isoform G [Drosophila melanogaster]
gi|272455000|gb|ACZ94590.1| poly U binding factor 68kD, isoform H [Drosophila melanogaster]
gi|272455001|gb|ACZ94591.1| poly U binding factor 68kD, isoform I [Drosophila melanogaster]
gi|272455002|gb|ACZ94592.1| poly U binding factor 68kD, isoform J [Drosophila melanogaster]
Length = 545
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
F+P+G I S + W P +GFAF+EY E A+LA E+M+G L GR + V
Sbjct: 58 FTPFGPIKSINMSWD---PITQKHKGFAFVEYEIPEGAQLALEQMNGALMGGRNIKV 111
>gi|307111065|gb|EFN59300.1| hypothetical protein CHLNCDRAFT_7238, partial [Chlorella
variabilis]
Length = 556
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 8/66 (12%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKR--GVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
+F+P+G + S R P++ G RGFAF++++TK+EA+ A E + G GR LV+
Sbjct: 487 LFTPFGHVNS------CRLPRKFDGTHRGFAFVDFATKQEARNAMEAVQGAHLYGRRLVL 540
Query: 59 RLASEK 64
A E+
Sbjct: 541 EWAEEE 546
>gi|384495073|gb|EIE85564.1| hypothetical protein RO3G_10274 [Rhizopus delemar RA 99-880]
Length = 437
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F +GKIVS + H P+ RGF F+ +S E+A AK++M+G+ +P+VV
Sbjct: 120 FRVFGKIVSARVMRH---PQTNQSRGFGFVSFSRAEDALRAKQEMNGQRLGSKPMVVAFH 176
Query: 62 SEK 64
K
Sbjct: 177 EPK 179
>gi|383862667|ref|XP_003706805.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Megachile rotundata]
Length = 630
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + G +GF F+ +S EEA A +M+GR+ +PL V LA
Sbjct: 316 FAPFGTITSAKVMMED-----GRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALA 370
Query: 62 SEK 64
K
Sbjct: 371 QRK 373
>gi|226498016|ref|NP_001151732.1| RNA binding protein [Zea mays]
gi|195649405|gb|ACG44170.1| RNA binding protein [Zea mays]
Length = 147
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F +G + +E L R KR PRGFAF+ Y+ +EEA+ A E MHG+ GR + V +A
Sbjct: 85 FEKFGDL-TEVCLVMDRVAKR--PRGFAFLSYTGEEEARGAMEGMHGKFLDGRVIFVEVA 141
Query: 62 SEK 64
+
Sbjct: 142 KRR 144
>gi|52346016|ref|NP_001005051.1| poly(A) binding protein, cytoplasmic 1 [Xenopus (Silurana)
tropicalis]
gi|49903495|gb|AAH76931.1| polyadenylate-binding protein 1 [Xenopus (Silurana) tropicalis]
Length = 634
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGTITSAKVMM-----EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|225543108|ref|NP_001139415.1| sex lethal [Tribolium castaneum]
Length = 218
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 11/76 (14%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA--CGRPLVV 58
+FS YG+I+ + L + G+PRG AF+ +S EEAK A + G+L PL V
Sbjct: 132 LFSNYGEIIQKSVL---KDKITGMPRGVAFVRFSRGEEAKAAIADLDGKLLENAMLPLSV 188
Query: 59 RLASE------KYLED 68
R+A + +YLE+
Sbjct: 189 RVAEDHGRQKAQYLEN 204
>gi|242025166|ref|XP_002432997.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518506|gb|EEB20259.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 211
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+F PYG IV ++ L + G+PRG AF+ Y KEEA+ A ++G + G + V
Sbjct: 123 IFGPYGFIVQKNIL---KDKVTGMPRGVAFVRYDKKEEAQAAISNLNGVVPDGATEAIQV 179
Query: 59 RLASE 63
++A E
Sbjct: 180 KIAEE 184
>gi|395818359|ref|XP_003782600.1| PREDICTED: polyadenylate-binding protein 1, partial [Otolemur
garnettii]
Length = 539
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 282 FSPFGTITSAKVMM-----EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 336
Query: 62 SEK 64
K
Sbjct: 337 QRK 339
>gi|401400601|ref|XP_003880816.1| putative RNA recognition motif-containing protein [Neospora caninum
Liverpool]
gi|325115228|emb|CBZ50783.1| putative RNA recognition motif-containing protein [Neospora caninum
Liverpool]
Length = 683
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVP-----RGFAFIEYSTKEEAKLAKEKMHGRLACGRP 55
+F P G IV R RG AFIE++ K++A+ A E + GR CGRP
Sbjct: 359 LFGPIGPIVDVSLPQIDRSISNDAEDAFAVRGIAFIEFADKKDARTALE-LSGRHLCGRP 417
Query: 56 LVVRLASEKYLEDAAQNSSKAVGEAN-KTGFVGGTS 90
+ V A+ E A QN+ +GE + FV TS
Sbjct: 418 ITVNYANLTKEERAVQNA--LLGEEKCLSSFVPATS 451
>gi|221221302|gb|ACM09312.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 131
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
FS YG I D + + G PRGF F++Y E+AK A E M+G+ GR + V
Sbjct: 25 FSKYGNIAKCDVIMDR---ETGRPRGFGFVKYDNAEDAKDAMEGMNGQSLDGRTIRV 78
>gi|451849890|gb|EMD63193.1| hypothetical protein COCSADRAFT_38066 [Cochliobolus sativus ND90Pr]
Length = 326
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +G I S ++ RG + RGFA++EY +A+ A + + ++ GR LVV+
Sbjct: 155 VFSRFGDIESIKIVYDNRG----LSRGFAYVEYKNVSDAQAAIDNLDMQVFEGRNLVVQF 210
Query: 61 ASEKYLEDAAQNSSKAVGEAN---KTGFVGGTSGQMN 94
+ KY A+ E N KT F+G S +M+
Sbjct: 211 HAPKY--QPAKGRGPNGNEPNPPSKTLFIGNMSFEMS 245
>gi|403290728|ref|XP_003936459.1| PREDICTED: polyadenylate-binding protein 1-like [Saimiri
boliviensis boliviensis]
Length = 614
Score = 43.1 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGVITSAKVM--TEGSHS---KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|444318439|ref|XP_004179877.1| hypothetical protein TBLA_0C05600 [Tetrapisispora blattae CBS 6284]
gi|387512918|emb|CCH60358.1| hypothetical protein TBLA_0C05600 [Tetrapisispora blattae CBS 6284]
Length = 215
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
FS +G ++ R K G R + F+E+ KE+AK+A+E M+ L G L VRL
Sbjct: 106 FSQFGDLIESRL---ARNKKSGNSRHYGFVEFVNKEDAKIAQETMNNYLLMGHLLQVRL 161
>gi|260834973|ref|XP_002612484.1| hypothetical protein BRAFLDRAFT_214383 [Branchiostoma floridae]
gi|229297861|gb|EEN68493.1| hypothetical protein BRAFLDRAFT_214383 [Branchiostoma floridae]
Length = 466
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI D + + + G +G+ FI + E AK A E+++G GRP+ V
Sbjct: 163 IFEPFGKI---DNIQLMKDSETGRSKGYGFITFHDAECAKKALEQLNGFELAGRPMKVGH 219
Query: 61 ASEKYLEDA-AQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA A S E +TG T+G++ AK+A
Sbjct: 220 VTER--SDAGAATSFLDSDELERTGIELSTTGRLQLMAKLA 258
>gi|165940926|gb|ABY75308.1| cytoplasmic 1 polyA binding protein [Ovis aries]
Length = 305
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 43 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 97
Query: 62 SEK 64
K
Sbjct: 98 QRK 100
>gi|432881580|ref|XP_004073850.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 631
Score = 43.1 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPFGSITSAKVMM-----EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|357146461|ref|XP_003574000.1| PREDICTED: splicing factor 3B subunit 4-like [Brachypodium
distachyon]
Length = 359
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G IV+ + R P+ G RGF F+ Y + E + A E M+ + C RP+ V A
Sbjct: 132 FSAFGVIVTNPKI--MRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYA 189
Query: 62 SEK 64
+K
Sbjct: 190 YKK 192
>gi|340719924|ref|XP_003398394.1| PREDICTED: polyadenylate-binding protein 1-like isoform 4 [Bombus
terrestris]
Length = 612
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + + G +GF F+ +S EEA A +M+GR+ +PL V LA
Sbjct: 316 FAPFGTITSAKVMM-----EEGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALA 370
Query: 62 SEK 64
K
Sbjct: 371 QRK 373
>gi|332030568|gb|EGI70256.1| Polyadenylate-binding protein 1 [Acromyrmex echinatior]
Length = 678
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + + G +GF F+ +S EEA A +M+GR+ +PL V LA
Sbjct: 359 FTPFGTITSAKVMM-----EEGRSKGFGFVCFSQPEEATKAVTEMNGRIVGSKPLYVALA 413
Query: 62 SEK 64
K
Sbjct: 414 QRK 416
>gi|326531316|dbj|BAK05009.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+ +G I S + +G+ +GF F+ YST +EAK A M G + G+PL V +A
Sbjct: 77 FAEFGNITSVKIMRD----DKGISKGFGFVCYSTPDEAKCAVSSMRGVMFYGKPLYVAIA 132
Query: 62 SEK 64
K
Sbjct: 133 QRK 135
>gi|334349575|ref|XP_003342221.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 707
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL + LA
Sbjct: 383 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYIALA 437
Query: 62 SEK 64
K
Sbjct: 438 QRK 440
>gi|327289313|ref|XP_003229369.1| PREDICTED: probable RNA-binding protein 23-like [Anolis
carolinensis]
Length = 445
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI D + R G +G+ FI +S E A+ A E+++G GRP+ V
Sbjct: 285 IFEPFGKI---DSIVLMRDQDTGQSKGYGFITFSEAECARRALEQLNGFELAGRPMRVGQ 341
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGF-VGGTSGQMNRSAKIA 100
+E+ E +++G +G T Q+ AK+A
Sbjct: 342 VTERLDGTTDITFPDGNDEPDRSGLNLGATGSQLQLMAKLA 382
>gi|170057743|ref|XP_001864617.1| splicing factor 3B subunit 4 [Culex quinquefasciatus]
gi|167877079|gb|EDS40462.1| splicing factor 3B subunit 4 [Culex quinquefasciatus]
Length = 360
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G I+ + R P+ G +GFAFI +++ E + A + M+G+ C RP+ V A
Sbjct: 120 FSAFGVILQTPKI--MRDPETGNSKGFAFINFASFEASDAAMDAMNGQYLCNRPISVSYA 177
Query: 62 SEK 64
+K
Sbjct: 178 FKK 180
>gi|196000456|ref|XP_002110096.1| hypothetical protein TRIADDRAFT_53710 [Trichoplax adhaerens]
gi|190588220|gb|EDV28262.1| hypothetical protein TRIADDRAFT_53710 [Trichoplax adhaerens]
Length = 317
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +G I + +++ RG K GF F+ + E+AK AKE +HG+ GR L V
Sbjct: 148 MFERFGNIEDVEIIFNERGSK-----GFGFVTFINPEDAKGAKEDIHGKSVDGRILEVNY 202
Query: 61 ASEK 64
A+ K
Sbjct: 203 ATPK 206
>gi|359386152|gb|AEV43365.1| poly A-binding protein 2 [Citrus sinensis]
Length = 652
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +G I S + R P G+ RG F+ +ST EEA A +M+G++ +PL V L
Sbjct: 341 LFSEFGTITSCKVM---RDPN-GISRGSGFVAFSTAEEASKALTEMNGKMVVSKPLYVAL 396
Query: 61 ASEK 64
A K
Sbjct: 397 AQRK 400
>gi|307207781|gb|EFN85399.1| Polyadenylate-binding protein 1 [Harpegnathos saltator]
Length = 552
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + + G +GF F+ +S EEA A +M+GR+ +PL V LA
Sbjct: 239 FTPFGTITSAKVMM-----EEGRSKGFGFVCFSQPEEATKAVTEMNGRIVGSKPLYVALA 293
Query: 62 SEK 64
K
Sbjct: 294 QRK 296
>gi|118785284|ref|XP_314526.3| AGAP010553-PA [Anopheles gambiae str. PEST]
gi|116128011|gb|EAA09944.4| AGAP010553-PA [Anopheles gambiae str. PEST]
Length = 643
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGR 54
F P+G I S + W K +GFAF+EY E A+LA E+M+G + GR
Sbjct: 180 FLPFGPIKSINMSWDPITQKH---KGFAFVEYEIPEGAQLALEQMNGAMLGGR 229
>gi|157108428|ref|XP_001650224.1| splicing factor [Aedes aegypti]
gi|108879330|gb|EAT43555.1| AAEL005046-PA [Aedes aegypti]
Length = 544
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI D + G +G+ FI + ++AK A E+++G GRP+ V
Sbjct: 306 IFEPFGKI---DNIQLIMDSDTGRSKGYGFITFHNADDAKKALEQLNGFELAGRPMKVGN 362
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ D ++S E +++G G +G++ K+A
Sbjct: 363 VTERL--DVTTHASLDTDEMDRSGIDLGATGRLQLMFKLA 400
>gi|347966116|ref|XP_321584.5| AGAP001538-PA [Anopheles gambiae str. PEST]
gi|333470203|gb|EAA00839.5| AGAP001538-PA [Anopheles gambiae str. PEST]
Length = 408
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G I+ + R P+ G +GFAFI +++ E + A + M+G+ C RP+ V A
Sbjct: 120 FSAFGVILQTPKI--MRDPETGNSKGFAFINFASFEASDAAMDAMNGQYLCNRPISVSYA 177
Query: 62 SEK 64
+K
Sbjct: 178 FKK 180
>gi|291416051|ref|XP_002724260.1| PREDICTED: hexaribonucleotide binding protein 3, partial
[Oryctolagus cuniculus]
Length = 266
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + T +A A+EK+HG + GR + V
Sbjct: 44 MFGQFGKILDVEIIFNERGSK-----GFGFVTFETSSDADRAREKLHGTIVEGRKIEVNN 98
Query: 61 ASEKYLED 68
A+ + + +
Sbjct: 99 ATARVMTN 106
>gi|449667931|ref|XP_002156035.2| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Hydra
magnipapillata]
Length = 597
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGR 54
F P+G I D W + K +GFAF+EY E A+LA E+M+ L GR
Sbjct: 159 FLPFGPIKMIDLSWDSATMKH---KGFAFVEYEIPEAAQLALEQMNNVLMGGR 208
>gi|338762832|gb|AEI98619.1| hypothetical protein 111O18.6 [Coffea canephora]
Length = 368
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G IV+ + R P+ G RGF FI Y + E + A E M+G+ C R + V A
Sbjct: 132 FSAFGVIVTNPKI--MRDPETGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
Query: 62 SEK 64
+K
Sbjct: 190 YKK 192
>gi|297274127|ref|XP_002800732.1| PREDICTED: polyadenylate-binding protein 1 [Macaca mulatta]
Length = 605
Score = 43.1 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 282 FSPFGTITSAKVMM-----EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 336
Query: 62 SEK 64
K
Sbjct: 337 QRK 339
>gi|303277453|ref|XP_003058020.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460677|gb|EEH57971.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 930
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 8/65 (12%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKR--GVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
+F+P+G + S R PK+ G RGFAF+E STK EA A E + G GR LV+
Sbjct: 831 LFNPFGALKS------CRLPKKFDGNHRGFAFVELSTKREATSALEALRGTHLYGRKLVI 884
Query: 59 RLASE 63
A+E
Sbjct: 885 ERAAE 889
>gi|255582596|ref|XP_002532080.1| RNA binding motif protein, putative [Ricinus communis]
gi|223528250|gb|EEF30303.1| RNA binding motif protein, putative [Ricinus communis]
Length = 181
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGP-KRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVR 59
+FSP+G+I R P K G RGFAF+EY TK+EA+ A + + GR LV+
Sbjct: 74 LFSPFGQI------KRLRLPVKFGNHRGFAFVEYVTKQEAQNALQALSSTHLYGRHLVLE 127
Query: 60 LASE 63
A E
Sbjct: 128 RAKE 131
>gi|30524922|ref|NP_780596.1| RNA binding protein fox-1 homolog 2 isoform 2 [Mus musculus]
gi|20073191|gb|AAH27263.1| RNA binding motif protein 9 [Mus musculus]
gi|148697686|gb|EDL29633.1| RNA binding motif protein 9, isoform CRA_b [Mus musculus]
Length = 435
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 199 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 253
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 254 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 292
Query: 121 QADNSSCNGSLNCLSGKDGLNN 142
QAD S N + LSG+ G+N
Sbjct: 293 QADVSLGNEAAVPLSGRGGINT 314
>gi|326477036|gb|EGE01046.1| RNA recognition motif-containing protein [Trichophyton equinum CBS
127.97]
Length = 300
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 3 SPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLAS 62
S YGK++ ++ +RG + RGF ++ + + EEAK A ++MH GR L V A
Sbjct: 110 SKYGKVLGTRIIYDSRG----LSRGFGYVRFESVEEAKKAIDEMHLSEYEGRKLSVNFAQ 165
Query: 63 EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMN 94
++ Q E +T FVG + Q+
Sbjct: 166 VDLRDEQPQRKM----EPTRTIFVGNIAHQVT 193
>gi|296200520|ref|XP_002747628.1| PREDICTED: polyadenylate-binding protein 1-like [Callithrix
jacchus]
Length = 614
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSPYG I S + T G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FSPYGVITSAKVM--TEGSHS---KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|82802757|gb|ABB92429.1| PABP3 [Hylobates lar]
Length = 635
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ PL V LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATEPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|327305247|ref|XP_003237315.1| nucleic acid-binding protein [Trichophyton rubrum CBS 118892]
gi|326460313|gb|EGD85766.1| nucleic acid-binding protein [Trichophyton rubrum CBS 118892]
Length = 293
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 3 SPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLAS 62
S YGK++ ++ +RG + RGF ++++ + EEAK A ++MH GR L V A
Sbjct: 103 SKYGKVLGTRIIYDSRG----LSRGFGYVKFESVEEAKKAIDEMHLSEYEGRKLSVNFAQ 158
Query: 63 EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMN 94
++ Q E +T FVG + Q+
Sbjct: 159 VDLRDEQPQRKM----EPTRTIFVGNIAHQVT 186
>gi|297259926|ref|XP_002798213.1| PREDICTED: RNA-binding protein 39-like [Macaca mulatta]
Length = 427
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
FS GKI S + + + G +G+ FI +S E AK A E+++G GRP+ V
Sbjct: 172 FFSTVGKIESIQLMMDS---ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 228
Query: 61 ASEKYLEDAAQNSS-KAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ DA+ SS E +TG GT+G++ A++A
Sbjct: 229 VTER--TDASSASSFLDSDELERTGIDLGTTGRLQLMARLA 267
>gi|383862669|ref|XP_003706806.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Megachile rotundata]
Length = 612
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + G +GF F+ +S EEA A +M+GR+ +PL V LA
Sbjct: 316 FAPFGTITSAKVMMED-----GRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALA 370
Query: 62 SEK 64
K
Sbjct: 371 QRK 373
>gi|307195359|gb|EFN77277.1| RNA-binding protein 39 [Harpegnathos saltator]
Length = 370
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI D + P+ G +G+ F+ + ++AK A E+++G GRP+ V
Sbjct: 128 IFEPFGKI---DNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRPMKVGN 184
Query: 61 ASEKYLEDAAQNSSKA-VGEANKTGFVGGTSGQMNRSAKIA 100
+E+ D Q S E +++G G +G++ K+A
Sbjct: 185 VTER--TDLIQGPSLLDTDELDRSGIDLGATGRLQLMFKLA 223
>gi|307103841|gb|EFN52098.1| hypothetical protein CHLNCDRAFT_59028 [Chlorella variabilis]
Length = 634
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G I S + + G RG F F+ Y++ EEA A +M+GR+ G+P+ V LA
Sbjct: 342 FSQFGTITSAKVMVDSAGKSRG----FGFVCYASPEEATRAVTEMNGRMIKGKPIYVALA 397
Query: 62 SEK 64
+
Sbjct: 398 QRR 400
>gi|71024221|ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gi|46101864|gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 13/69 (18%)
Query: 9 VSEDFLWHT-------------RGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRP 55
VSED +W+ + P G P+GF ++E++ +E A+ A + M G+ GRP
Sbjct: 323 VSEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAIDAMTGQELAGRP 382
Query: 56 LVVRLASEK 64
L + ++ +
Sbjct: 383 LRLDFSTPR 391
>gi|1403308|emb|CAA67016.1| sex-lethal [Drosophila subobscura]
Length = 346
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+F YG IV ++ L R G PRG AF+ Y+ +EEA+ A ++ + G +PL V
Sbjct: 224 IFGKYGSIVQKNIL---RDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSV 280
Query: 59 RLASE 63
RLA E
Sbjct: 281 RLAQE 285
>gi|4930239|pdb|3SXL|A Chain A, Sex-Lethal Rna Recognition Domains 1 And 2 From Drosophila
Melanogaster
gi|4930240|pdb|3SXL|B Chain B, Sex-Lethal Rna Recognition Domains 1 And 2 From Drosophila
Melanogaster
gi|4930241|pdb|3SXL|C Chain C, Sex-Lethal Rna Recognition Domains 1 And 2 From Drosophila
Melanogaster
Length = 184
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+F YG IV ++ L R G PRG AF+ Y+ +EEA+ A ++ + G +PL V
Sbjct: 120 IFGKYGSIVQKNIL---RDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSV 176
Query: 59 RLASE 63
RLA E
Sbjct: 177 RLAEE 181
>gi|403305068|ref|XP_003943097.1| PREDICTED: polyadenylate-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 803
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 481 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 535
Query: 62 SEK 64
K
Sbjct: 536 QRK 538
>gi|297832034|ref|XP_002883899.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
gi|297329739|gb|EFH60158.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
Length = 655
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F+PYG + S + R P G+ RG F+ +ST EEA A +M G++ +PL V +
Sbjct: 341 LFTPYGTVTSCKVM---RDPN-GMSRGSGFVAFSTPEEATKAMSEMSGKMIENKPLYVAV 396
Query: 61 ASEK 64
A K
Sbjct: 397 AQRK 400
>gi|392597434|gb|EIW86756.1| splicing factor CC1-like protein [Coniophora puteana RWD-64-598
SS2]
Length = 360
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G + +F+ R G +G+AF++Y E+AK+A E+M G GR L V
Sbjct: 154 VFEPFGDL---EFVDLHRDSTTGRSKGYAFVQYKRPEDAKMALEQMDGFELAGRTLRVNT 210
Query: 61 ASEK 64
EK
Sbjct: 211 VHEK 214
>gi|119113388|ref|XP_309558.3| AGAP011092-PA [Anopheles gambiae str. PEST]
gi|116131767|gb|EAA05186.3| AGAP011092-PA [Anopheles gambiae str. PEST]
Length = 634
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+PYG I S + G +GF F+ +S +EA A +M+GR+ +PL V LA
Sbjct: 306 FAPYGTITSAKVML-----DEGRSKGFGFVCFSAPDEATKAVTEMNGRIVGSKPLYVALA 360
Query: 62 SEK 64
K
Sbjct: 361 QRK 363
>gi|448878328|gb|AGE46127.1| arginine/serine-rich splicing factor SC31 transcript V [Sorghum
bicolor]
Length = 185
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F YGK+V ++ R + G RGFAF+ Y +EA+ A +++ GR GR ++V+
Sbjct: 35 LFERYGKVVD---VFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRLDGRNVDGRNIMVQF 91
Query: 61 A 61
A
Sbjct: 92 A 92
>gi|13540314|gb|AAK29408.1|AF338225_1 embryonic poly(A) binding protein [Xenopus laevis]
Length = 629
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F PYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FLPYGTITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|157833885|pdb|1SXL|A Chain A, Resonance Assignments And Solution Structure Of The
Second Rna-Binding Domain Of Sex-Lethal Determined By
Multidimensional Heteronuclear Magnetic Resonance
Spectroscopy
Length = 97
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+F YG IV ++ L R G PRG AF+ Y+ +EEA+ A ++ + G +PL V
Sbjct: 33 IFGKYGSIVQKNIL---RDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSV 89
Query: 59 RLASE 63
RLA E
Sbjct: 90 RLAEE 94
>gi|194386544|dbj|BAG61082.1| unnamed protein product [Homo sapiens]
Length = 604
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 282 FSPFGTITSAKVMM-----EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 336
Query: 62 SEK 64
K
Sbjct: 337 QRK 339
>gi|357465131|ref|XP_003602847.1| Multiple RNA-binding domain-containing protein [Medicago
truncatula]
gi|355491895|gb|AES73098.1| Multiple RNA-binding domain-containing protein [Medicago
truncatula]
Length = 290
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Query: 6 GKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPL-------VV 58
GK+VS + ++H P+R P G+ F+ Y +K+EA A + G+ GRPL V
Sbjct: 207 GKVVSAEVIFH-ENPRR--PSGYGFVSYKSKKEADEALAEFQGKNFMGRPLRVAPSKRFV 263
Query: 59 RLASEKY-LEDAAQNSSKAVGEANKT 83
+LA E ED + S EA+KT
Sbjct: 264 QLAEESAGSEDTSSELSVNEAEADKT 289
>gi|225435044|ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
gi|297746123|emb|CBI16179.3| unnamed protein product [Vitis vinifera]
Length = 112
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MFSP+G + + + PK P+GF F+++ ++ +A+ A + M+GR+ GR + V +
Sbjct: 44 MFSPFGVVTQARLI---KDPKTQRPKGFGFVKFESEVDAEKALKAMNGRIVRGRLIFVEI 100
Query: 61 A 61
A
Sbjct: 101 A 101
>gi|237836525|ref|XP_002367560.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|211965224|gb|EEB00420.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|221484014|gb|EEE22318.1| hypothetical protein TGGT1_018190 [Toxoplasma gondii GT1]
gi|221505287|gb|EEE30941.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 532
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F +G I+S L P++ RG+ FIEY+T + AKLA E M+G G+ L V
Sbjct: 268 IFVVFGPILSCQLLPSQENPQQH--RGYGFIEYATADAAKLAIETMNGFEVAGKQLKVNF 325
Query: 61 AS 62
A+
Sbjct: 326 AT 327
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 14/98 (14%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRG-VPRGFAFIEYSTKEEAKLAKEKMH-----GR-LACG 53
+F +G IVS D PK G +GF F+EY++ E A++A M GR + G
Sbjct: 94 VFQAFGTIVSVDM------PKEGDRSKGFCFVEYASPEAAEMALSTMQNFVLKGRTIKVG 147
Query: 54 RPLVVRLASEKYLEDAAQNSSK-AVGEANKTGFVGGTS 90
RP V ++ A + +VG A + GTS
Sbjct: 148 RPTAVGTGGQQLQRPAMMMPTVGSVGAAGGLTSMAGTS 185
>gi|195399065|ref|XP_002058141.1| GJ15655 [Drosophila virilis]
gi|194150565|gb|EDW66249.1| GJ15655 [Drosophila virilis]
Length = 340
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G I+ + R P+ G +GFAFI +++ E + A + M+G+ C RP+ V A
Sbjct: 120 FSAFGVILQTPKI--MRDPETGKSKGFAFINFASFEASDAAMDAMNGQYLCNRPISVSYA 177
Query: 62 SEK 64
+K
Sbjct: 178 FKK 180
>gi|413956150|gb|AFW88799.1| hypothetical protein ZEAMMB73_294352 [Zea mays]
Length = 735
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 12/92 (13%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F +G I S + +G+ RGF F+ YST EEAK A M G + G+PL V +
Sbjct: 422 FVEFGNITSAKVMRD----DKGISRGFGFVCYSTPEEAKSAVNNMRGVMFFGKPLYVAIF 477
Query: 62 SEKY-----LEDAAQNSSKAVGEAN---KTGF 85
K L+ ++ VG AN TG+
Sbjct: 478 QRKEERKAKLQQHFAQLARMVGPANSMIPTGY 509
>gi|326472099|gb|EGD96108.1| RNA binding domain-containing protein [Trichophyton tonsurans CBS
112818]
Length = 293
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 3 SPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLAS 62
S YGK++ ++ +RG + RGF ++ + + EEAK A ++MH GR L V A
Sbjct: 103 SKYGKVLGTRIIYDSRG----LSRGFGYVRFESVEEAKKAIDEMHLSEYEGRKLSVNFAQ 158
Query: 63 EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMN 94
++ Q E +T FVG + Q+
Sbjct: 159 VDLRDEQPQRKM----EPTRTIFVGNIAHQVT 186
>gi|198476543|ref|XP_001357388.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
gi|198137744|gb|EAL34457.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
Length = 625
Score = 43.1 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI + + T + +G+ FI Y E+AK A E+++G GRP+ V
Sbjct: 384 IFEPFGKIDAIQLIMDTETNRS---KGYGFITYHNAEDAKKALEQLNGFELAGRPMKVGN 440
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ +S E ++TG G +G++ K+A
Sbjct: 441 VTERL---DMNTTSLDTDEMDRTGIDLGATGRLQLMFKLA 477
>gi|157137418|ref|XP_001663981.1| spliceosome associated protein [Aedes aegypti]
gi|108869713|gb|EAT33938.1| AAEL013795-PA [Aedes aegypti]
Length = 362
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G I+ + R P+ G +GFAFI +++ E + A + M+G+ C RP+ V A
Sbjct: 120 FSAFGVILQTPKI--MRDPETGNSKGFAFINFASFEASDAAMDAMNGQYLCNRPISVSYA 177
Query: 62 SEK 64
+K
Sbjct: 178 FKK 180
>gi|158295312|ref|XP_001237762.2| AGAP006089-PA [Anopheles gambiae str. PEST]
gi|157015976|gb|EAU76548.2| AGAP006089-PA [Anopheles gambiae str. PEST]
Length = 623
Score = 43.1 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +G I+ + +++ RG K GF F+ ++ +A+ A+E++HG + GR + V
Sbjct: 205 MFGQFGSILDVEIIFNERGSK-----GFGFVTFANSSDAERARERLHGTVVEGRKIEVNN 259
Query: 61 ASEKYLEDAAQNSSKAV 77
A+ + A S AV
Sbjct: 260 ATARVQSKKAPAVSSAV 276
>gi|317106693|dbj|BAJ53194.1| JHL03K20.3 [Jatropha curcas]
Length = 642
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +G I S + R P GV +G F+ YST EEA A +M+G++ +PL V L
Sbjct: 330 LFSEFGTITSCKVM---RDPN-GVSKGSGFVAYSTAEEASKALTEMNGKMIVSKPLYVAL 385
Query: 61 ASEK 64
A K
Sbjct: 386 AQRK 389
>gi|302659529|ref|XP_003021453.1| nucleic acid-binding protein [Trichophyton verrucosum HKI 0517]
gi|291185354|gb|EFE40835.1| nucleic acid-binding protein [Trichophyton verrucosum HKI 0517]
Length = 293
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 3 SPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLAS 62
S YGK++ ++ +RG + RGF ++ + + EEAK A ++MH GR L V A
Sbjct: 103 SKYGKVLGTRIIYDSRG----LSRGFGYVRFESVEEAKKAIDEMHLSEYEGRKLSVNFAQ 158
Query: 63 EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMN 94
++ Q E +T FVG + Q+
Sbjct: 159 VDLRDEQPQRKM----EPTRTIFVGNIAHQVT 186
>gi|194381714|dbj|BAG64226.1| unnamed protein product [Homo sapiens]
Length = 591
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A M+GR+ +PL V LA
Sbjct: 269 FSPFGTITSAKVMMEG-----GRSKGFGFVCFSSPEEATKAVTGMNGRIVATKPLYVALA 323
Query: 62 SEK 64
K
Sbjct: 324 QRK 326
>gi|149066043|gb|EDM15916.1| RNA binding motif protein 9 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 435
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 199 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 253
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 254 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 292
Query: 121 QADNSSCNGSLNCLSGKDGLNN 142
QAD S N + LSG+ G+N
Sbjct: 293 QADVSLGNEAAVPLSGRGGINT 314
>gi|148227542|ref|NP_001082094.1| embryonic polyadenylate-binding protein A [Xenopus laevis]
gi|94711253|sp|Q98SP8.2|EPABA_XENLA RecName: Full=Embryonic polyadenylate-binding protein A;
Short=Embryonic poly(A)-binding protein A; Short=ePAB-A;
Short=ePABP-A; AltName: Full=XePABP-A
gi|51258324|gb|AAH80020.1| EPAB protein [Xenopus laevis]
Length = 629
Score = 42.7 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F PYG I S + T G G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 314 FLPYGTITSAKVM--TEG---GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|395334381|gb|EJF66757.1| splicing factor CC1-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 624
Score = 42.7 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ +F+ R P G +G+AF++Y E+AK+A E+M G GR L V
Sbjct: 417 VFEPFGEL---EFVDLHRDPVTGRSKGYAFVQYKRAEDAKMALEQMDGFELAGRTLRVNT 473
Query: 61 ASEK 64
EK
Sbjct: 474 VHEK 477
>gi|343171872|gb|AEL98640.1| putative translation initiation factor 3 subunit B, partial [Silene
latifolia]
Length = 517
Score = 42.7 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHG-RLACGRPLVVR 59
++S G ++ E+ W K G G+ FIE++T +EA+LAKEK HG RL V
Sbjct: 77 IYSQMG-VIKENGFWMPVDEKTGKSLGYCFIEFNTPQEAELAKEKTHGYRLDKAHLFAVN 135
Query: 60 LAS--EKYLE 67
L EKY++
Sbjct: 136 LFEDIEKYMK 145
>gi|343171870|gb|AEL98639.1| putative translation initiation factor 3 subunit B, partial [Silene
latifolia]
Length = 517
Score = 42.7 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHG-RLACGRPLVVR 59
++S G ++ E+ W K G G+ FIE++T +EA+LAKEK HG RL V
Sbjct: 77 IYSQMG-VIKENGFWMPVDEKTGKSLGYCFIEFNTPQEAELAKEKTHGYRLDKAHLFAVN 135
Query: 60 LAS--EKYLE 67
L EKY++
Sbjct: 136 LFEDIEKYMK 145
>gi|224072369|ref|XP_002303703.1| predicted protein [Populus trichocarpa]
gi|222841135|gb|EEE78682.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGP-KRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVR 59
+F P+G+I S R P K G RGFAF+EY TK+EA+ A + + GR LV+
Sbjct: 697 LFGPFGQIKS------LRLPMKFGNHRGFAFVEYVTKQEAQNALQALSSTHLYGRHLVLE 750
Query: 60 LASE 63
A E
Sbjct: 751 RAKE 754
>gi|412985322|emb|CCO20347.1| predicted protein [Bathycoccus prasinos]
Length = 789
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 1 MFSPYGKIVSEDF-LWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA--CGRPLV 57
+FSPYG + S L HT G + +G+ F++ +E+A A +HG + C +PLV
Sbjct: 627 LFSPYGLVQSVKLVLDHTTG----LSKGYGFVQMMDQEQAMSAVVAVHGNMVEGCTKPLV 682
Query: 58 VRLASEK 64
V +A++K
Sbjct: 683 VNIANDK 689
>gi|302506947|ref|XP_003015430.1| nucleic acid-binding protein [Arthroderma benhamiae CBS 112371]
gi|291179002|gb|EFE34790.1| nucleic acid-binding protein [Arthroderma benhamiae CBS 112371]
Length = 293
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 3 SPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLAS 62
S YGK++ ++ +RG + RGF ++ + + EEAK A ++MH GR L V A
Sbjct: 103 SKYGKVLGTRIIYDSRG----LSRGFGYVRFESVEEAKKAIDEMHLSEYEGRKLSVNFAQ 158
Query: 63 EKYLEDAAQNSSKAVGEANKTGFVGGTSGQMN 94
++ Q E +T FVG + Q+
Sbjct: 159 VDLRDEQPQRKM----EPTRTIFVGNIAHQVT 186
>gi|126342235|ref|XP_001367420.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 635
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL + LA
Sbjct: 314 FSPFGTITSAKVMMEG-----GRNKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYIALA 368
Query: 62 SEK 64
K
Sbjct: 369 QRK 371
>gi|410901849|ref|XP_003964407.1| PREDICTED: RNA binding protein fox-1 homolog 2-like [Takifugu
rubripes]
Length = 460
Score = 42.7 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A+ A+EK+HG GR + V
Sbjct: 218 MFGHFGKILDVEIIFNERGSK-----GFGFVTFENSTDAEKAREKLHGTQVEGRKIEVNN 272
Query: 61 ASEKYLEDAAQNSSKAVGEANKT 83
A+ + + + S G+A T
Sbjct: 273 ATARVMTNKKMVSPFPNGDALST 295
>gi|312378306|gb|EFR24923.1| hypothetical protein AND_10202 [Anopheles darlingi]
Length = 645
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+PYG I S + G +GF F+ +S +EA A +M+GR+ +PL V LA
Sbjct: 315 FAPYGTITSAKVML-----DEGRSKGFGFVCFSAPDEATKAVTEMNGRIVGSKPLYVALA 369
Query: 62 SEK 64
K
Sbjct: 370 QRK 372
>gi|195586940|ref|XP_002083225.1| GD13472 [Drosophila simulans]
gi|194195234|gb|EDX08810.1| GD13472 [Drosophila simulans]
Length = 541
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
F+P+G I S + W P +GFAF+EY E A+LA E+M+G L GR + V
Sbjct: 129 FTPFGPIKSINMSWD---PITQKHKGFAFVEYEIPEGAQLALEQMNGALMGGRNIKV 182
>gi|18461363|gb|AAL71902.1|AF229055_1 hexaribonucleotide binding protein 2 [Mus musculus]
Length = 377
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + +A A+EK+HG + GR + V
Sbjct: 131 MFGQFGKILDVEIIFNERGSK-----GFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 185
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAKKQK 120
A+ + + + + A G K++ + + E ++S+
Sbjct: 186 ATARVMTNKKMVTPYANG------------------WKLSPVVGAVYGPELYAASS---F 224
Query: 121 QADNSSCNGSLNCLSGKDGLNNL 143
QAD S N + +SG+ G+N
Sbjct: 225 QADVSLGNEAAVPMSGRGGINTY 247
>gi|348503003|ref|XP_003439056.1| PREDICTED: RNA-binding protein 39-like [Oreochromis niloticus]
Length = 498
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI + + + G +G+ FI ++ E AK A E+++G GRP+ V
Sbjct: 246 IFEPFGKIEGIQLMMDS---ETGRSKGYGFISFADAECAKKALEQLNGFELAGRPMKVGH 302
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ + + +S E +TG GT+G++ A++A
Sbjct: 303 VTERS-DSSTASSFLDNDELERTGIDLGTTGRLQLMARLA 341
>gi|401406015|ref|XP_003882457.1| GA11385, related [Neospora caninum Liverpool]
gi|325116872|emb|CBZ52425.1| GA11385, related [Neospora caninum Liverpool]
Length = 564
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F +G I+S L P++ RG+ FIEY+T + AKLA E M+G G+ L V
Sbjct: 291 IFVVFGPILSCQLLPSQENPQQH--RGYGFIEYATADAAKLAIETMNGFEVAGKQLKVNF 348
Query: 61 AS 62
A+
Sbjct: 349 AT 350
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 18/98 (18%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRG-VPRGFAFIEYSTKEEAKLAKEKMH-----GR-LACG 53
+F +G IVS D PK G +GF F+EY++ E A++A M GR + G
Sbjct: 96 VFQAFGTIVSVDM------PKEGDRSKGFCFVEYASPEAAEMALSTMQNFVLKGRTIKVG 149
Query: 54 RPLVVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSG 91
RP V ++ Q + + + G VGG +G
Sbjct: 150 RPTAVGTGGQQL-----QRPAMMMPTVSTMGAVGGLTG 182
>gi|62857945|ref|NP_001017152.1| CUGBP Elav-like family member 1 [Xenopus (Silurana) tropicalis]
gi|123910258|sp|Q28HE9.1|CELF1_XENTR RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=RNA-binding protein BRUNOL-2
gi|89272922|emb|CAJ82289.1| CUG triplet repeat, RNA binding protein 1 [Xenopus (Silurana)
tropicalis]
Length = 490
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA---CGRPLV 57
MFS +G+I L RGP G+ RG AF+ ++T+ A++A + MH C P+V
Sbjct: 127 MFSQFGQIEESRIL---RGPD-GMSRGCAFVTFTTRSMAQMAIKAMHQAQTMEGCSSPIV 182
Query: 58 VRLASEK 64
V+ A +
Sbjct: 183 VKFADTQ 189
>gi|417399827|gb|JAA46899.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 370
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS YGKIVS + + G +GF F+ + T E A+ A E M+G+ CG+ + V
Sbjct: 209 VFSQYGKIVSVKVMTDSSGK----SKGFGFVSFDTHEAAQRAVEYMNGKDICGQMVFVGR 264
Query: 61 ASEK 64
A +K
Sbjct: 265 AQKK 268
>gi|410931355|ref|XP_003979061.1| PREDICTED: CUGBP Elav-like family member 1-like [Takifugu rubripes]
Length = 378
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA---CGRPLV 57
MFSPYG+I L RGP G+ RG AF+ ++ ++ A+ A + MH C P+V
Sbjct: 153 MFSPYGQIEECRIL---RGPD-GLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIV 208
Query: 58 VRLASEK 64
V+ A +
Sbjct: 209 VKFADTQ 215
>gi|326519747|dbj|BAK00246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 368
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G IV+ + R P+ G RGF F+ Y + E + A E M+ + C RP+ V A
Sbjct: 132 FSAFGVIVTNPKI--MRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYA 189
Query: 62 SEK 64
+K
Sbjct: 190 YKK 192
>gi|226496737|ref|NP_001151785.1| LOC100285420 [Zea mays]
gi|195649671|gb|ACG44303.1| polyadenylate-binding protein 2 [Zea mays]
gi|414586484|tpg|DAA37055.1| TPA: polyadenylate-binding protein 2 [Zea mays]
Length = 660
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+FS +GKI S + + G+ +G F+ +ST+EEA A +M+G++ G+PL V
Sbjct: 341 LFSNFGKITSCKVMRD----QNGLSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAF 396
Query: 61 ASEK 64
A K
Sbjct: 397 AQRK 400
>gi|156554126|ref|XP_001604025.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Nasonia
vitripennis]
Length = 627
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + G +GF F+ +S EEA A +M+GR+ +PL V LA
Sbjct: 316 FAPFGTITSVKVMMED-----GRSKGFGFVCFSLAEEATKAVTEMNGRIVGSKPLYVALA 370
Query: 62 SEK----------YLEDAAQNSSKAVGEANKTGFVG 87
K YL+ A + +G+ + G G
Sbjct: 371 QRKEDRKAHLASQYLQRVANIRMQHMGQVFQAGGAG 406
>gi|12643503|sp|Q24668.2|SXL_DROSU RecName: Full=Protein sex-lethal
Length = 354
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+F YG IV ++ L R G PRG AF+ Y+ +EEA+ A ++ + G +PL V
Sbjct: 232 IFGKYGSIVQKNIL---RDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSV 288
Query: 59 RLASE 63
RLA E
Sbjct: 289 RLAQE 293
>gi|395533328|ref|XP_003768712.1| PREDICTED: RNA binding protein fox-1 homolog 3 [Sarcophilus
harrisii]
Length = 454
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MF +GKI+ + +++ RG K GF F+ + T +A A+EK++G + GR + V
Sbjct: 199 MFGQFGKILDVEIIFNERGSK-----GFGFVTFETSTDADRAREKLNGTIVEGRKIEVNN 253
Query: 61 ASEKYLED 68
A+ + + +
Sbjct: 254 ATARVMTN 261
>gi|148226626|ref|NP_001080100.1| splicing factor 3b, subunit 4, 49kDa [Xenopus laevis]
gi|28374170|gb|AAH45264.1| Spx-prov protein [Xenopus laevis]
Length = 377
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G I+ + R P G +G+AFI Y++ + + A E M+G+ C RP+ V A
Sbjct: 120 FSAFGVILQTPKIM--RDPDTGNSKGYAFINYASFDASDAAIEAMNGQYLCNRPITVSYA 177
Query: 62 SEK 64
+K
Sbjct: 178 FKK 180
>gi|410080926|ref|XP_003958043.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
gi|372464630|emb|CCF58908.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
Length = 412
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
MFS +G+IVS H P+ P+GF +++Y+ E+AK A + + G RP+ +
Sbjct: 284 MFSKFGEIVSVRIPTH---PETEQPKGFGYVQYTNVEDAKKALDALQGEYIDNRPVRLDF 340
Query: 61 ASEK 64
++ +
Sbjct: 341 STPR 344
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS YG++V + + G RGF FI Y++ EEA A + + G+ GRP+ V A
Sbjct: 62 FSKYGEVVDARIIMDR---ETGRSRGFGFITYTSVEEASSAIQALDGQDLHGRPIRVNYA 118
Query: 62 SEK 64
+E+
Sbjct: 119 NER 121
>gi|195397963|ref|XP_002057597.1| GJ18017 [Drosophila virilis]
gi|194141251|gb|EDW57670.1| GJ18017 [Drosophila virilis]
Length = 599
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI D + + G +G+ FI Y ++AK A E+++G GRP+ V
Sbjct: 359 IFEPFGKI---DVIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRPMKVGN 415
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ SS E +++G G +G++ K+A
Sbjct: 416 VTERL---DMNTSSLDTDEMDRSGIDLGATGRLQLMFKLA 452
>gi|255548666|ref|XP_002515389.1| Eukaryotic translation initiation factor 3 subunit, putative
[Ricinus communis]
gi|223545333|gb|EEF46838.1| Eukaryotic translation initiation factor 3 subunit, putative
[Ricinus communis]
Length = 720
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 8 IVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHG 48
++ ED LW P+ G+ FIEY+T +EA+LAKEK +G
Sbjct: 91 VIKEDGLWMPVDPETQKTLGYCFIEYNTPQEAELAKEKTNG 131
>gi|195116809|ref|XP_002002944.1| GI10246 [Drosophila mojavensis]
gi|193913519|gb|EDW12386.1| GI10246 [Drosophila mojavensis]
Length = 617
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI + + T + G +G+ FI Y ++AK A E+++G GRP+ V
Sbjct: 377 IFEPFGKIDAIQLIMDT---ETGRSKGYGFITYHNADDAKKALEQLNGFELAGRPMKVGN 433
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ SS E +++G G +G++ K+A
Sbjct: 434 VTERL---DMNTSSLDTDEMDRSGIDLGATGRLQLMFKLA 470
>gi|195133204|ref|XP_002011029.1| GI16317 [Drosophila mojavensis]
gi|193907004|gb|EDW05871.1| GI16317 [Drosophila mojavensis]
Length = 340
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G I+ + R P+ G +GFAFI +++ E + A + M+G+ C RP+ V A
Sbjct: 120 FSAFGVILQTPKI--MRDPETGKSKGFAFINFASFEASDAAMDAMNGQYLCNRPISVSYA 177
Query: 62 SEK 64
+K
Sbjct: 178 FKK 180
>gi|195060144|ref|XP_001995761.1| GH17589 [Drosophila grimshawi]
gi|193896547|gb|EDV95413.1| GH17589 [Drosophila grimshawi]
Length = 340
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G I+ + R P+ G +GFAFI +++ E + A + M+G+ C RP+ V A
Sbjct: 120 FSAFGVILQTPKI--MRDPETGKSKGFAFINFASFEASDAAMDAMNGQYLCNRPISVSYA 177
Query: 62 SEK 64
+K
Sbjct: 178 FKK 180
>gi|410899827|ref|XP_003963398.1| PREDICTED: RNA-binding protein 39-like [Takifugu rubripes]
Length = 500
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI + + + G +G+ FI ++ E AK A E+++G GRP+ V
Sbjct: 248 IFEPFGKIEGIQLMMDS---ETGRSKGYGFISFADAECAKKALEQLNGFELAGRPMKVGH 304
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ + + +S E +TG GT+G++ A++A
Sbjct: 305 VTERS-DSSTASSILDNDELERTGIDLGTTGRLQLMARLA 343
>gi|358399615|gb|EHK48952.1| hypothetical protein TRIATDRAFT_164478, partial [Trichoderma
atroviride IMI 206040]
Length = 571
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ +F+ + G RG+ F+++ +A+ A EKM+G GRP+ V L
Sbjct: 302 VFEPFGEL---EFVQLQKD-DNGRSRGYGFVQFRDAGQAREALEKMNGFDLAGRPIRVGL 357
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVG 87
++K+ ++ N N+ GF G
Sbjct: 358 GNDKFTPESTANLMHKFSGNNQGGFQG 384
>gi|242025596|ref|XP_002433210.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
gi|212518751|gb|EEB20472.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
Length = 637
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+P+G I S + G +GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 316 FTPFGTITSAKVMLED-----GRSKGFGFVCFSSAEEATKAVTEMNGRIVGSKPLYVALA 370
Query: 62 SEK 64
K
Sbjct: 371 QRK 373
>gi|195427509|ref|XP_002061819.1| GK17204 [Drosophila willistoni]
gi|194157904|gb|EDW72805.1| GK17204 [Drosophila willistoni]
Length = 631
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
F+P+G I S + W K +GFAF+EY E A+LA E+M+G L GR + V
Sbjct: 130 FTPFGPIKSINMSWDPITQKH---KGFAFVEYEIPEGAQLALEQMNGALMGGRNIKV 183
>gi|148229719|ref|NP_001086794.1| MGC82420 protein [Xenopus laevis]
gi|50604232|gb|AAH77458.1| MGC82420 protein [Xenopus laevis]
Length = 383
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FS +G I+ + R P G +G+AFI Y++ + + A E M+G+ C RP+ V A
Sbjct: 120 FSAFGVILQTPKIM--RDPDTGNSKGYAFINYASFDASDAAIEAMNGQYLCNRPITVSYA 177
Query: 62 SEK 64
+K
Sbjct: 178 FKK 180
>gi|432865706|ref|XP_004070573.1| PREDICTED: RNA-binding protein 39-like [Oryzias latipes]
Length = 516
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+GKI + + + G +G+ FI ++ E AK A E+++G GRP+ V
Sbjct: 265 IFEPFGKIEGIQLMMDS---ETGRSKGYGFISFADAECAKKALEQLNGFELAGRPMKVGH 321
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIA 100
+E+ + + +S E +TG GT+G++ A++A
Sbjct: 322 VTERS-DSSTASSFLDNDELERTGIDLGTTGRLQLMARLA 360
>gi|395545876|ref|XP_003774823.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 621
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
FSP+G I S + + G RGF F+ +S +EA A +M+G+L +PL V LA
Sbjct: 305 FSPFGTITSAKVMM-----EGGHSRGFGFVCFSAPDEAAKAVTEMNGKLVTSKPLYVALA 359
Query: 62 SEK 64
K
Sbjct: 360 QRK 362
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 21 KRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64
+RG +GF F+ Y+T E+A+ A ++M+G+ GR + V A +K
Sbjct: 217 ERGRSKGFGFVSYATHEDAQRAVDEMNGKELNGRRIYVGRAQKK 260
>gi|321466794|gb|EFX77787.1| polyadenylate binding protein, cytoplasmic 1 [Daphnia pulex]
Length = 574
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61
F+PYG I S + G +G GF F+ +S+ EEA A +M+GR+ +PL V LA
Sbjct: 316 FAPYGTITSAKVMTEG-GRNKG---GFGFVCFSSPEEATKAVTEMNGRILVSKPLYVALA 371
Query: 62 SEK 64
K
Sbjct: 372 QRK 374
>gi|78710141|ref|NP_727163.2| Sex lethal, isoform E [Drosophila melanogaster]
gi|78710163|ref|NP_727165.2| Sex lethal, isoform A [Drosophila melanogaster]
gi|45446831|gb|AAO41638.2| Sex lethal, isoform A [Drosophila melanogaster]
gi|71854536|gb|AAZ52512.1| Sex lethal, isoform E [Drosophila melanogaster]
Length = 314
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVV 58
+F YG IV ++ L R G PRG AF+ Y+ +EEA+ A ++ + G +PL V
Sbjct: 190 IFGKYGSIVQKNIL---RDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSV 246
Query: 59 RLASE 63
RLA E
Sbjct: 247 RLAEE 251
>gi|374376206|ref|ZP_09633864.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
gi|373233046|gb|EHP52841.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
Length = 110
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 13/63 (20%)
Query: 1 MFSPYG-----KIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRP 55
+F+PYG KIVS+ F ++G F F+E +T EEAK A E ++G GR
Sbjct: 20 LFAPYGEVTSAKIVSDKFTNRSKG--------FGFVEMATDEEAKAAIEALNGTEVDGRN 71
Query: 56 LVV 58
+VV
Sbjct: 72 IVV 74
>gi|255941952|ref|XP_002561745.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586368|emb|CAP94118.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 562
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60
+F P+G++ +F+ + + G +G+AF++++ E+A+ A EKM+G GR + V L
Sbjct: 291 VFEPFGEL---EFVQLQKD-ETGRSKGYAFVQFANPEQARDALEKMNGFELAGRAIRVGL 346
Query: 61 ASEKYLEDAAQNSSKAVGEANKTGFVGGT-SGQMNRSAK 98
++K+ D N N+ F G + SGQ R +
Sbjct: 347 GNDKFTPDTHANRPSGAS-TNQPNFQGSSFSGQGGRGVQ 384
>gi|195336594|ref|XP_002034920.1| GM14211 [Drosophila sechellia]
gi|194128013|gb|EDW50056.1| GM14211 [Drosophila sechellia]
Length = 616
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58
F+P+G I S + W P +GFAF+EY E A+LA E+M+G L GR + V
Sbjct: 129 FTPFGPIKSINMSWD---PITQKHKGFAFVEYEIPEGAQLALEQMNGALMGGRNIKV 182
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.310 0.127 0.356
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,117,232,266
Number of Sequences: 23463169
Number of extensions: 73330313
Number of successful extensions: 249262
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1820
Number of HSP's successfully gapped in prelim test: 2678
Number of HSP's that attempted gapping in prelim test: 244254
Number of HSP's gapped (non-prelim): 7298
length of query: 145
length of database: 8,064,228,071
effective HSP length: 109
effective length of query: 36
effective length of database: 9,801,709,946
effective search space: 352861558056
effective search space used: 352861558056
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 71 (32.0 bits)