Query 032211
Match_columns 145
No_of_seqs 192 out of 1929
Neff 7.8
Searched_HMMs 13730
Date Mon Mar 25 17:58:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032211.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032211hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2cq0a1 d.58.7.1 (A:231-320) E 99.7 3.7E-17 2.7E-21 105.7 8.6 62 1-65 28-89 (90)
2 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.7 4E-17 2.9E-21 105.2 6.6 61 1-64 27-87 (88)
3 d2cqba1 d.58.7.1 (A:1-89) Pept 99.7 3.2E-17 2.3E-21 105.8 4.6 62 1-65 25-86 (89)
4 d1b7fa1 d.58.7.1 (A:123-204) S 99.7 4.7E-17 3.5E-21 103.2 5.4 60 1-63 22-81 (82)
5 d1fxla1 d.58.7.1 (A:37-118) Hu 99.7 1.1E-16 8.3E-21 101.3 7.0 60 1-63 22-81 (82)
6 d2u2fa_ d.58.7.1 (A:) Splicing 99.6 7.6E-17 5.6E-21 103.2 5.8 62 1-65 21-82 (85)
7 d1cvja1 d.58.7.1 (A:11-90) Pol 99.6 8.6E-17 6.2E-21 101.8 5.9 60 1-63 20-79 (80)
8 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.6 1E-16 7.3E-21 104.3 5.5 62 1-65 29-90 (93)
9 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.6 2.5E-16 1.8E-20 102.4 6.9 62 1-65 27-88 (93)
10 d2cpza1 d.58.7.1 (A:383-484) C 99.6 1.2E-16 9.1E-21 105.5 5.5 63 1-66 38-100 (102)
11 d2cpfa1 d.58.7.1 (A:362-446) P 99.6 1.6E-16 1.2E-20 101.4 5.4 64 1-64 18-81 (85)
12 d1whwa_ d.58.7.1 (A:) Probable 99.6 2.1E-16 1.5E-20 103.7 6.1 64 1-67 28-91 (99)
13 d1b7fa2 d.58.7.1 (A:205-289) S 99.6 4.5E-16 3.3E-20 99.4 6.7 58 1-61 26-85 (85)
14 d1p1ta_ d.58.7.1 (A:) Cleavage 99.6 1.4E-16 1E-20 105.3 4.3 65 1-68 28-92 (104)
15 d2ghpa3 d.58.7.1 (A:206-291) U 99.6 2.6E-16 1.9E-20 100.8 5.1 62 1-65 25-86 (86)
16 d2cpha1 d.58.7.1 (A:454-547) P 99.6 4.5E-16 3.3E-20 101.4 6.2 62 1-65 28-91 (94)
17 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.6 2.5E-16 1.8E-20 100.1 4.3 63 1-66 18-81 (83)
18 d1fxla2 d.58.7.1 (A:119-203) H 99.6 6.8E-16 4.9E-20 98.7 6.2 58 1-61 26-85 (85)
19 d1no8a_ d.58.7.1 (A:) Nuclear 99.6 6.6E-16 4.8E-20 97.2 5.5 59 1-63 20-78 (78)
20 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.6 3.2E-16 2.3E-20 108.6 4.3 63 1-66 62-124 (139)
21 d2cq4a1 d.58.7.1 (A:132-232) R 99.6 5.4E-16 4E-20 102.4 4.2 61 1-65 38-98 (101)
22 d2cqga1 d.58.7.1 (A:96-185) TA 99.6 1.2E-15 8.8E-20 98.7 5.4 61 1-66 28-88 (90)
23 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.6 5.9E-16 4.3E-20 99.7 3.8 64 1-67 25-88 (90)
24 d2ghpa1 d.58.7.1 (A:116-196) U 99.6 8E-16 5.8E-20 97.2 4.1 60 1-63 21-80 (81)
25 d2cq3a1 d.58.7.1 (A:110-202) R 99.6 4.8E-15 3.5E-19 96.1 7.5 61 1-66 31-91 (93)
26 d1jmta_ d.58.7.3 (A:) d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=3.7e-17 Score=105.67 Aligned_cols=62 Identities=27% Similarity=0.351 Sum_probs=58.4
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~ 65 (145)
+|++||.|.++.|+. |+.+|.++|||||+|.+.++|..||+.|||..|+|+.|.|+||+|+.
T Consensus 28 ~f~~~G~v~~v~i~~---d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~akp~~ 89 (90)
T d2cq0a1 28 LFRPFGSISRIYLAK---DKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKPST 89 (90)
T ss_dssp TSTTTCCEEEEEEEE---CSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEESSCCC
T ss_pred HHHHhcccccccccc---cccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEeeeCCC
Confidence 699999999999986 67899999999999999999999999999999999999999998864
No 2
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.67 E-value=4e-17 Score=105.18 Aligned_cols=61 Identities=30% Similarity=0.506 Sum_probs=57.6
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEcccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~ 64 (145)
+|++||.|.+++++. |+.+|+++|||||+|.+.++|..|+..|||..|.|+.|.|+||.++
T Consensus 27 ~F~~~G~i~~v~i~~---d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~a~~k 87 (88)
T d1rk8a_ 27 KFCDYGEIKNIHLNL---DRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWCFVK 87 (88)
T ss_dssp HHGGGSCEEEEEEEE---CTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEESEEC
T ss_pred HHHHcCCcccccccc---cccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEEecCC
Confidence 489999999999986 7889999999999999999999999999999999999999999875
No 3
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=3.2e-17 Score=105.80 Aligned_cols=62 Identities=31% Similarity=0.467 Sum_probs=58.0
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~ 65 (145)
+|++||+|.+++++. |+.+|+++|||||+|.+.++|..|+..|||..|+|+.|.|+||.|+.
T Consensus 25 ~F~~~G~i~~v~i~~---d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a~p~~ 86 (89)
T d2cqba1 25 AFIPFGDITDIQIPL---DYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAKPMR 86 (89)
T ss_dssp HHTTTSCCCCEECCC---CSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEECCCCC
T ss_pred HHhhCCeEEeccccc---ccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeCCCC
Confidence 489999999999985 78899999999999999999999999999999999999999998764
No 4
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.66 E-value=4.7e-17 Score=103.18 Aligned_cols=60 Identities=22% Similarity=0.406 Sum_probs=56.6
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASE 63 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~ 63 (145)
+|++||.|.+++++. |+.+|+++|||||+|.+.++|.+||+.|||..|.|+.|.|+||+|
T Consensus 22 ~F~~~G~v~~~~i~~---~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 22 LFRAIGPINTCRIMR---DYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp HHHTTSCEEEEECCE---ETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred HHHHhCCcceeeeee---ecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 589999999999986 677899999999999999999999999999999999999999987
No 5
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=1.1e-16 Score=101.32 Aligned_cols=60 Identities=22% Similarity=0.378 Sum_probs=56.7
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASE 63 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~ 63 (145)
+|++||.|.+++++. |+.+|+++|||||+|.+.++|..|++.|||..|.|+.|.|.||+|
T Consensus 22 ~f~~~G~v~~v~i~~---~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 22 LFGSIGEIESCKLVR---DKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp HHHTTSCEEEEEEEE---CTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred HHHHhCCccccccee---eccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 489999999999986 678899999999999999999999999999999999999999986
No 6
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=7.6e-17 Score=103.25 Aligned_cols=62 Identities=21% Similarity=0.379 Sum_probs=58.1
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~ 65 (145)
+|++||+|.+++|+. |+.||+++|||||+|.++++|..|+..|||+.|.|++|.|++|.+..
T Consensus 21 ~F~~~G~v~~v~i~~---d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~~~ 82 (85)
T d2u2fa_ 21 LLTSFGPLKAFNLVK---DSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA 82 (85)
T ss_dssp HHTSSSCEEEEEEEC---CCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCCCC
T ss_pred HHHhcCccceEEeec---cccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCCC
Confidence 489999999999985 78899999999999999999999999999999999999999998753
No 7
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=8.6e-17 Score=101.79 Aligned_cols=60 Identities=22% Similarity=0.358 Sum_probs=56.5
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASE 63 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~ 63 (145)
+|++||+|.+++|+. |+.+|+++|||||+|.++++|..|++.|||..|.|++|+|.||..
T Consensus 20 ~F~~~G~i~~v~i~~---d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~~ 79 (80)
T d1cvja1 20 KFSPAGPILSIRVCR---DMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQR 79 (80)
T ss_dssp HHGGGSCEEEEEEEE---CTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECCC
T ss_pred HHHHhCCEeEEEEEe---cccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeCC
Confidence 489999999999996 788999999999999999999999999999999999999999864
No 8
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=1e-16 Score=104.33 Aligned_cols=62 Identities=26% Similarity=0.409 Sum_probs=58.2
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~ 65 (145)
+|++||.|.+++|+. |+.+|.++|||||+|.+.++|..||+.|||..|.|+.|.|+||.++.
T Consensus 29 ~F~~~G~v~~v~~~~---d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~A~~~~ 90 (93)
T d1x5ua1 29 LFLQAGPVVNTHMPK---DRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKASAHN 90 (93)
T ss_dssp HHHTTSCEEEEECCB---CSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEETTTTS
T ss_pred HHHHhCCccccceee---cccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCCCC
Confidence 489999999999985 78899999999999999999999999999999999999999998864
No 9
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=2.5e-16 Score=102.38 Aligned_cols=62 Identities=21% Similarity=0.256 Sum_probs=57.7
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~ 65 (145)
+|++||+|.++.++. |+.+|.++|||||+|.+.++|..|++.|||..|+|++|.|.|+.+..
T Consensus 27 ~F~~~G~i~~v~i~~---~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~a~~~~ 88 (93)
T d1h2vz_ 27 LFSKSGDIKKIIMGL---DKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFK 88 (93)
T ss_dssp HHGGGSCEEEEEEEE---CTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEEESCCC
T ss_pred HHHHHCCcceecccc---ccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCC
Confidence 489999999999986 68899999999999999999999999999999999999999987654
No 10
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=1.2e-16 Score=105.51 Aligned_cols=63 Identities=27% Similarity=0.446 Sum_probs=59.0
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccch
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYL 66 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~ 66 (145)
+|++||.|.+++++. |+.+|.++|||||+|.+.++|..||+.|||..|.|+.|.|+||.++..
T Consensus 38 ~F~~~G~i~~~~~~~---~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a~~k~~ 100 (102)
T d2cpza1 38 MFMPFGNVVSAKVFI---DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKND 100 (102)
T ss_dssp HHGGGSCCSEEEEEE---CSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECCCCSCC
T ss_pred HHHhhccccccceee---ecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEeCCCCC
Confidence 589999999999986 788999999999999999999999999999999999999999998754
No 11
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.62 E-value=1.6e-16 Score=101.36 Aligned_cols=64 Identities=28% Similarity=0.409 Sum_probs=55.2
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEcccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~ 64 (145)
+|++||.|.++.|+.++.....+.++|||||+|.+.++|..|++.|||+.|+|+.|.|+||.+.
T Consensus 18 ~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~~ 81 (85)
T d2cpfa1 18 VFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISERA 81 (85)
T ss_dssp HHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSCS
T ss_pred HHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCC
Confidence 5899999999999875333333467999999999999999999999999999999999998654
No 12
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.62 E-value=2.1e-16 Score=103.74 Aligned_cols=64 Identities=28% Similarity=0.410 Sum_probs=58.9
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccchh
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYLE 67 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~~ 67 (145)
+|++||.|.+++|+. |+.+|+++|||||+|.+.++|..||+.|||+.|+|+.|.|.++.++...
T Consensus 28 ~F~~~g~v~~v~i~~---d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~a~~~~~~ 91 (99)
T d1whwa_ 28 LFSAYGPLSELHYPI---DSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPSTIKKEA 91 (99)
T ss_dssp HHHTTSCEEEEECCC---CTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEECCCCSTT
T ss_pred HHHhcCCceeeeecc---cccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCCcc
Confidence 489999999999885 7889999999999999999999999999999999999999999986543
No 13
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.61 E-value=4.5e-16 Score=99.41 Aligned_cols=58 Identities=41% Similarity=0.733 Sum_probs=54.3
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCC--eeeEEEEc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVVRLA 61 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~g--r~l~V~~a 61 (145)
+|++||+|.+++++. |+.+|+++|||||+|.+.++|..||+.|||..+.| ++|.|+||
T Consensus 26 ~F~~~G~i~~~~~~~---d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~~A 85 (85)
T d1b7fa2 26 IFGKYGSIVQKNILR---DKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 85 (85)
T ss_dssp HHTSSSCEEEEEEEE---CTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEEC
T ss_pred HHHhhCCEeeeeeec---ccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEEEC
Confidence 589999999999986 78899999999999999999999999999999976 89999997
No 14
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=1.4e-16 Score=105.34 Aligned_cols=65 Identities=32% Similarity=0.548 Sum_probs=59.6
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccchhh
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYLED 68 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~~~ 68 (145)
+|++||.|.+++|+. |+.+|+++|||||+|.+.++|..|++.|||..|.|+.|.|++|.+.....
T Consensus 28 ~f~~~G~i~~v~i~~---~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~~~~~~~ 92 (104)
T d1p1ta_ 28 IFSEVGPVVSFRLVY---DRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKE 92 (104)
T ss_dssp HHHTTSCCSEEEEEE---ETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETTCTTHHH
T ss_pred hhhcccccccccccc---ccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCCCcc
Confidence 589999999999986 67889999999999999999999999999999999999999998865544
No 15
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.61 E-value=2.6e-16 Score=100.84 Aligned_cols=62 Identities=24% Similarity=0.306 Sum_probs=53.5
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~ 65 (145)
+|++||.|.+++|+.+ +..+|+++|||||+|.+.++|..|| .|||+.|.|+.|.|++|.+++
T Consensus 25 ~F~~~G~i~~v~i~~~--~~~~~~~kg~afV~f~~~~~a~~Al-~~n~~~~~gr~l~V~~a~~kP 86 (86)
T d2ghpa3 25 SFEGFGSIEKINIPAG--QKEHSFNNCCAFMVFENKDSAERAL-QMNRSLLGNREISVSLADKKP 86 (86)
T ss_dssp HHGGGSCEEEEECCSC--CC---CCCEEEEEEESSHHHHHHHG-GGTTEEETTEEEEEEECCCCC
T ss_pred HHHhhhhccceeeecc--cCCccccceeeeEEECCHHHHHHHH-hcCCCEECCEEEEEEEcCCCC
Confidence 4899999999998752 4578999999999999999999999 599999999999999998864
No 16
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.61 E-value=4.5e-16 Score=101.36 Aligned_cols=62 Identities=31% Similarity=0.530 Sum_probs=56.2
Q ss_pred CCCCCcceeEEEEeeccCCC-CCCCCccEEEEEEccHHHHHHHHHHh-cCCeeCCeeeEEEEccccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGP-KRGVPRGFAFIEYSTKEEAKLAKEKM-HGRLACGRPLVVRLASEKY 65 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~-~tg~skG~~FV~f~~~e~A~~Ai~~l-ng~~i~gr~l~V~~a~~~~ 65 (145)
+|++||.|.+++|+. |+ .+|+++|||||+|.+.++|..||+.| ||..|+|++|.|+||.++.
T Consensus 28 ~F~~~G~i~~v~i~~---~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V~~A~~~~ 91 (94)
T d2cpha1 28 LFSTFGELKTVRLPK---KMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEWADSEV 91 (94)
T ss_dssp HHHTTSCEEEEECCC---CCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEEEECCCCC
T ss_pred HHHHhCCceEEEEEe---ccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEEEEcCCCC
Confidence 589999999999885 43 47999999999999999999999998 8999999999999998764
No 17
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=2.5e-16 Score=100.09 Aligned_cols=63 Identities=33% Similarity=0.677 Sum_probs=56.3
Q ss_pred CCCCCcceeEE-EEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccch
Q 032211 1 MFSPYGKIVSE-DFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYL 66 (145)
Q Consensus 1 lFs~~G~I~~~-~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~ 66 (145)
+|++||.|.++ +++ +|+.+|+++|||||+|.+.++|..||+.|||..|.|++|.|.||.++..
T Consensus 18 ~F~~~G~i~~~~~i~---~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k~~ 81 (83)
T d1x5ta1 18 TFSAFGVILQTPKIM---RDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDS 81 (83)
T ss_dssp HHHTTSCBSSCCEEC---CCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCCCC
T ss_pred HHHHhCceeeeEEEE---eeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCCCc
Confidence 48999999765 555 4788999999999999999999999999999999999999999987643
No 18
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=6.8e-16 Score=98.67 Aligned_cols=58 Identities=34% Similarity=0.692 Sum_probs=53.8
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCC--eeeEEEEc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVVRLA 61 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~g--r~l~V~~a 61 (145)
+|++||+|.+++++. |+.+|+++|||||+|.+.++|..|++.|||..+.| ++|.|+||
T Consensus 26 ~F~~~G~v~~v~i~~---d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~A 85 (85)
T d1fxla2 26 LFSQYGRIITSRILV---DQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFA 85 (85)
T ss_dssp HHGGGSCEEEEEEEE---CTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEEC
T ss_pred HHHHhCCcccccccc---ccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEeC
Confidence 589999999999996 78899999999999999999999999999999997 56999986
No 19
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.59 E-value=6.6e-16 Score=97.21 Aligned_cols=59 Identities=22% Similarity=0.423 Sum_probs=54.2
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASE 63 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~ 63 (145)
+|++||.|.+++|+. |+ +|+++|||||+|.+.++|..|++.|||..+.|++|.|++|..
T Consensus 20 ~F~~~G~v~~~~i~~---~~-~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~S 78 (78)
T d1no8a_ 20 LFAEFGTLKKAAVHY---DR-SGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTS 78 (78)
T ss_dssp HHHHHSCEEEEEESC---SS-CCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEECC
T ss_pred HHHHhCCCeEEEEEE---ee-ccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 488999999999985 44 899999999999999999999999999999999999999863
No 20
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.59 E-value=3.2e-16 Score=108.57 Aligned_cols=63 Identities=24% Similarity=0.391 Sum_probs=58.4
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccch
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYL 66 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~ 66 (145)
+|++||.|.+++|+. |+.||+++|||||+|.+.++|..||+.|||+.|.|+.|.|++|.++..
T Consensus 62 ~F~~~G~i~~v~i~~---d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~a~~~~~ 124 (139)
T d1u6fa1 62 LFERYGPIESVKIVC---DRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVALAASGHQ 124 (139)
T ss_dssp HHHHHSCEEEEEEEE---ETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEESSCCCC
T ss_pred HHHhhcccccccccc---ccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCCC
Confidence 589999999999986 688999999999999999999999999999999999999999987643
No 21
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=5.4e-16 Score=102.37 Aligned_cols=61 Identities=21% Similarity=0.421 Sum_probs=56.0
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~ 65 (145)
+|+.||.|.+++|+. |+.+|+++|||||+|.+.++|..|+ .|||..|.|+.|.|+++.++.
T Consensus 38 ~F~~~G~V~~v~i~~---d~~tg~~kG~afV~F~~~e~a~~A~-~l~g~~~~G~~l~V~~a~~~~ 98 (101)
T d2cq4a1 38 FFSAVGKVRDVRIIS---DRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEK 98 (101)
T ss_dssp HHTTTSCEEEEEECC---SCCSSSCCCCEEEEESCGGGHHHHH-HHTTEEETTEEEEEEEHHHHH
T ss_pred HHcCCCeEEEEEeee---cCCCccccceEEEEECCHHHHHHHH-HHCCCEECCEEEEEEECCCCC
Confidence 589999999999985 7889999999999999999999999 599999999999999986553
No 22
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=1.2e-15 Score=98.69 Aligned_cols=61 Identities=21% Similarity=0.352 Sum_probs=54.8
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccch
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYL 66 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~ 66 (145)
+|++||.|.+++|+. |+.+|++||||||+|.+.++|.+||+. .+.|+|+.|.|++|.++..
T Consensus 28 ~F~~~G~i~~v~i~~---d~~tg~srG~aFV~f~~~~~a~~al~~--~~~l~Gr~i~v~~a~~k~~ 88 (90)
T d2cqga1 28 YFSTFGEVLMVQVKK---DLKTGHSKGFGFVRFTEYETQVKVMSQ--RHMIDGRWCDCKLPNSKQS 88 (90)
T ss_dssp HHGGGSCEEEEEEEE---CSSSCSEEEEEEEEESSHHHHHHHHHS--CEEETTEEEEEECCCTTCC
T ss_pred HHHhhcccceeeecc---CCCCcccCCEEEEEECCHHHHHHHHhc--CCccCCEEeEEEeCCCCCC
Confidence 489999999999996 788999999999999999999999975 4589999999999988643
No 23
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=5.9e-16 Score=99.71 Aligned_cols=64 Identities=28% Similarity=0.421 Sum_probs=58.2
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccchh
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYLE 67 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~~ 67 (145)
+|++||.|..+.++. ++.+|.++|||||+|.+.++|..||..|||+.|.|+.|.|++|.++...
T Consensus 25 ~F~~~G~i~~~~~~~---~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a~~~~~~ 88 (90)
T d1x5sa1 25 VFSKYGQISEVVVVK---DRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDN 88 (90)
T ss_dssp HHHHHSCCCEEEECC---CSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEEECCCCC
T ss_pred hhhccccccceeecc---ccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCCCCCC
Confidence 488999999998875 6778999999999999999999999999999999999999999877543
No 24
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.56 E-value=8e-16 Score=97.22 Aligned_cols=60 Identities=23% Similarity=0.345 Sum_probs=49.5
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASE 63 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~ 63 (145)
+|++||.|..+.++. +..+|+++|||||+|.+.++|.+|++.|||..|.|++|.|+++.|
T Consensus 21 ~f~~~G~v~~~~~~~---~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 21 LLQDINVVALSIRLP---SLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp HHHHTTCCCCEEECC----------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred HHHHhCcEEeeeeec---ccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 488999998887774 567899999999999999999999999999999999999999987
No 25
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=4.8e-15 Score=96.11 Aligned_cols=61 Identities=30% Similarity=0.654 Sum_probs=54.9
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccch
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYL 66 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~ 66 (145)
+|++||.|.+++++. |+ +.++|||||+|.+.++|..||..|||..|.|+.|.|++|.++..
T Consensus 31 ~F~~~G~v~~v~~~~---~~--~~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~A~~r~~ 91 (93)
T d2cq3a1 31 MFGQFGKILDVEIIF---NE--RGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVM 91 (93)
T ss_dssp HGGGTSCEEEEEEEC---CT--TTTCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEECCSSCC
T ss_pred HHhhcceeeeccccc---cc--cCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEecCcCCC
Confidence 589999999999985 33 34799999999999999999999999999999999999998753
No 26
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=1.7e-15 Score=100.47 Aligned_cols=57 Identities=19% Similarity=0.313 Sum_probs=52.6
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a 61 (145)
+|++||+|.+++|+. + .+|+++|||||+|.+.++|.+|+..|||+.|.||+|.|+|.
T Consensus 47 ~f~k~G~I~~v~I~~---~-~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 47 MEEKYGEVEEMNVCD---N-LGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHTCCEEEEEECC---S-SSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred HhccCCCEEEEEeec---C-CCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 378999999999974 3 58999999999999999999999999999999999999985
No 27
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=1.8e-15 Score=99.99 Aligned_cols=62 Identities=23% Similarity=0.317 Sum_probs=56.0
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccch
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYL 66 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~ 66 (145)
+|++||.|.+++|+. |+.+|+++|||||+|.+.++|..||+.+|+ .|.|+.|.|++|.....
T Consensus 30 ~F~~~G~i~~v~i~~---d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~~a~~~~~ 91 (103)
T d2cqda1 30 YFEGFGDIEEAVVIT---DRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVNLAYLGAK 91 (103)
T ss_dssp HHHTTSCEEEEEESC---CSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEEESTTTCC
T ss_pred HHhhcccccceeccc---cccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEEEcCCCCC
Confidence 489999999999985 788999999999999999999999988876 79999999999887543
No 28
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=2.7e-15 Score=95.18 Aligned_cols=55 Identities=35% Similarity=0.593 Sum_probs=51.8
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEE
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVV 58 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V 58 (145)
+|++||.|.+++|+. |+.+|+++|||||+|.+.++|..|+..|||..|+|+.|.|
T Consensus 29 ~F~~~G~i~~v~i~~---~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 29 VFSKYGPIADVSIVY---DQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp HHHTTSCEEEEEEEE---CSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred HHHHhCCCccccccc---cccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 489999999999986 6888999999999999999999999999999999999987
No 29
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.55 E-value=9.1e-16 Score=96.50 Aligned_cols=57 Identities=14% Similarity=0.280 Sum_probs=53.2
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a 61 (145)
+|++||.|.+++|+. |+.+|++||||||+|.+.++|.+||. +|++.|+|+.|.|++|
T Consensus 20 ~F~~~G~i~~v~i~~---d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 20 YFGQFGEVKECLVMR---DPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp HHTTTSCCCCEEEEC---CCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred HHHHhCCcceeeeec---ccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 489999999999985 88999999999999999999999995 7999999999999986
No 30
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=4.2e-15 Score=94.79 Aligned_cols=58 Identities=26% Similarity=0.409 Sum_probs=53.8
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEcc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLAS 62 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~ 62 (145)
+|++||.|.+++|+. |+.+|+++|||||+|.+.++|.+||+ ++++.|.|+.|.|+.|.
T Consensus 26 ~F~~~G~i~~v~i~~---d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~A~ 83 (84)
T d1l3ka1 26 HFEQWGTLTDCVVMR---DPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAV 83 (84)
T ss_dssp HHGGGSCEEEEEEEE---CTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEECC
T ss_pred HHHhhccccceeecc---cccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEeee
Confidence 489999999999986 78899999999999999999999995 69999999999999885
No 31
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.54 E-value=1.1e-14 Score=93.69 Aligned_cols=56 Identities=23% Similarity=0.286 Sum_probs=49.5
Q ss_pred CCCCCcceeEEEEeeccCCCCCCC---CccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEE
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGV---PRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVR 59 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~---skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~ 59 (145)
+|++||+|.++.++. |+.++. ++|||||+|.+.++|..||+.|||..|+|++|+|.
T Consensus 31 ~F~~~G~I~~v~i~~---~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~lkvS 89 (89)
T d2cpia1 31 YFGKFGKIHKVVINN---STSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTLKAS 89 (89)
T ss_dssp TTTTTSCEEEEEEEC---CSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEEEEE
T ss_pred HhcccCCceEEEEee---ccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEEEEC
Confidence 599999999999986 454543 45999999999999999999999999999999984
No 32
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=2.4e-15 Score=93.90 Aligned_cols=57 Identities=23% Similarity=0.426 Sum_probs=52.2
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a 61 (145)
+|++||.|.++.|+. |+.+|+++|||||+|.+.++|+.||. ++++.|.|+.|.|+.|
T Consensus 19 ~F~~~G~i~~~~i~~---d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 19 YFSKFGEVVDCTLKL---DPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp HHHTTSCEEEEECCC---BTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred HHHhhcccccccccc---CCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 489999999999985 78899999999999999999999995 8999999999999764
No 33
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=3.9e-15 Score=98.51 Aligned_cols=62 Identities=21% Similarity=0.330 Sum_probs=56.8
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccch
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYL 66 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~ 66 (145)
+|++||.|.++.|+. |+.++.++|||||+|.+.++|..|| .++|+.|.|+.|.|++|.++..
T Consensus 40 ~F~~~G~i~~~~i~~---d~~~~~~kg~aFV~f~~~~~a~~al-~~~~~~l~G~~i~V~~a~~ke~ 101 (103)
T d1x4ba1 40 YYEQWGKLTDCVVMR---DPASKRSRGFGFVTFSSMAEVDAAM-AARPHSIDGRVVEPKRAVAREE 101 (103)
T ss_dssp HHTSSCCCSEEEEEC---CTTTSSCCSEEEEECSSHHHHHHHH-TSCSEEETTEEEEEECCSSCCC
T ss_pred HHHhhCcccceeecc---cccCCCccCeEEEEECCHHHHHHHH-HhCCCeECCEEEEEEECcccCC
Confidence 489999999999985 7889999999999999999999998 5899999999999999988653
No 34
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=5.7e-15 Score=98.81 Aligned_cols=58 Identities=29% Similarity=0.366 Sum_probs=52.9
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEcccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~ 64 (145)
+|++||.|.+|++.. ++.++|||||+|.+.++|..||+.|||+.|+|+.|.|.++.+.
T Consensus 27 ~F~~~G~v~~i~~~~------~~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a~~~ 84 (114)
T d2f9da1 27 IFGKYGPIRQIRVGN------TPETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNAN 84 (114)
T ss_dssp HHHTTSCEEEEEEEC------STTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCHH
T ss_pred HHhhcCCeEeecccc------cCCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCC
Confidence 589999999998873 5668999999999999999999999999999999999998654
No 35
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=2.1e-15 Score=97.03 Aligned_cols=61 Identities=30% Similarity=0.466 Sum_probs=54.5
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccch
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYL 66 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~ 66 (145)
+|++||.|.+++|+. |. +.++|||||+|.+.++|..||+.|||..|.|+.|.|.+|.++..
T Consensus 28 ~F~~~G~v~~~~i~~---~~--~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~~~~~ 88 (89)
T d1cvja2 28 TFSAFGNILSCKVVC---DE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKE 88 (89)
T ss_dssp HHHTTSCEEEEEECC---BT--TBCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECCCTTT
T ss_pred HHHhcCCceEEEEEe---ec--CCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCCC
Confidence 489999999999985 33 34789999999999999999999999999999999999987653
No 36
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=1.6e-14 Score=94.58 Aligned_cols=54 Identities=39% Similarity=0.668 Sum_probs=50.0
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~ 65 (145)
+|++||.|.+++| +||||||+|.+.++|.+||+.|||+.|.|+.|.|+|+.+..
T Consensus 36 ~F~~~G~i~~~~i-----------~rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~~ 89 (98)
T d1wf2a_ 36 IFSKYGKIVGCSV-----------HKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPK 89 (98)
T ss_dssp SSTTSSCEEEEEE-----------ETEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEETTSCC
T ss_pred HHhhcCCEEEEEE-----------eCCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCC
Confidence 6999999999887 37999999999999999999999999999999999997643
No 37
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=6.2e-15 Score=92.83 Aligned_cols=56 Identities=30% Similarity=0.472 Sum_probs=51.7
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~ 65 (145)
+|++||.|.++++.. .+|||||+|.+.++|..|+..|||..|.|+.|.|.||++++
T Consensus 23 ~F~~~G~I~~v~~~~---------~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~P 78 (79)
T d2bz2a1 23 AFSPFGNIIDLSMDP---------PRNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIARKQP 78 (79)
T ss_dssp HHSTTCCCSCEEEET---------TTTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEECCSSC
T ss_pred HHhccCccceeeecc---------CCCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEecCCC
Confidence 589999999998863 47899999999999999999999999999999999998765
No 38
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=8.1e-15 Score=94.43 Aligned_cols=60 Identities=23% Similarity=0.349 Sum_probs=53.5
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~ 65 (145)
+|++||+|.+++++. |+.+ .+|||||+|.+.++|..|+..|||..|.|+.|.|.||.+..
T Consensus 28 ~F~~~G~i~~v~i~~---d~~~--~~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~a~~~~ 87 (90)
T d2cqia1 28 LFSQIGPCKSCKMIT---EHTS--NDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPS 87 (90)
T ss_dssp HHHHHSCEEEEEEEC---CCCS--SCCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECCCTT
T ss_pred HHHhcCCceeeeeec---ccCc--cceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCCCC
Confidence 488999999999985 4444 47999999999999999999999999999999999998754
No 39
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=1.3e-14 Score=94.88 Aligned_cols=67 Identities=27% Similarity=0.286 Sum_probs=55.1
Q ss_pred CCCCCcceeEEEE-----eeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccchh
Q 032211 1 MFSPYGKIVSEDF-----LWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYLE 67 (145)
Q Consensus 1 lFs~~G~I~~~~i-----~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~~ 67 (145)
+|++||.|..+.+ +...+|+.+|+++|||||+|.+.++|..||+.|||+.|.|+.|.|++|.++...
T Consensus 28 ~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~gr~i~V~~a~~~~p~ 99 (101)
T d2cpea1 28 FFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLARKKPPM 99 (101)
T ss_dssp HHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEETTEECEEECSSCCCCS
T ss_pred HHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEECCEEEEEEEcCCCCCC
Confidence 4889998743211 112257888999999999999999999999999999999999999999886543
No 40
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=3.8e-15 Score=93.24 Aligned_cols=57 Identities=23% Similarity=0.321 Sum_probs=51.9
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a 61 (145)
+|++||+|.+++|+. |+.+|+++|||||+|.+.++|.+||+ .+++.|.|+.|.|+.|
T Consensus 19 ~F~~~G~I~~v~i~~---d~~t~~~rG~~FV~f~~~~~a~~al~-~~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 19 YFGGFGEVESIELPM---DNKTNKRRGFCFITFKEEEPVKKIME-KKYHNVGLSKCEIKVA 75 (75)
T ss_dssp HHHHHSCEEEEECCC---CTTTCCTTCCEEEEESSSHHHHHHTT-CSSCCBTTBCCEEECC
T ss_pred HHHHhCCcccccccc---cccccccccEEEEEECCHHHHHHHHh-hCCCEECCEEeEEEEC
Confidence 488999999999985 78899999999999999999999995 5888999999999876
No 41
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=1.4e-14 Score=94.56 Aligned_cols=57 Identities=26% Similarity=0.422 Sum_probs=52.1
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccch
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYL 66 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~ 66 (145)
+|++||.|.+++++. .+|||||+|.+.++|..|+..|||..|.|+.|+|.|+++.+.
T Consensus 38 ~F~~fG~i~~v~i~~---------~kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~ak~~p~ 94 (96)
T d1x4ga1 38 TFSPFGQIMEIRVFP---------EKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPD 94 (96)
T ss_dssp HHHHHSCEEEEEEET---------TTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECCCCCCS
T ss_pred HHHHhCCceEEEEEe---------cceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCCC
Confidence 488999999999984 379999999999999999999999999999999999987653
No 42
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=4.1e-14 Score=88.69 Aligned_cols=57 Identities=26% Similarity=0.388 Sum_probs=52.6
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a 61 (145)
+|++||.|..+.++. |+.++.++|||||+|.+.+++.+|+ .+||+.|+|+.|.|+.|
T Consensus 22 ~F~~~G~i~~~~~~~---~~~~~~~~g~afV~f~~~e~~~~al-~~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 22 YFEQYGKIEVIEIMT---DRGSGKKRGFAFVTFDDHDSVDKIV-IQKYHTVNGHNCEVRKA 78 (79)
T ss_dssp HHTTTSCEEEEEEEE---CTTTCCEEEEEEEEESSHHHHHHHH-HCSCCEETTEECEEEEC
T ss_pred HHHHhcccccccccc---CCCCcccccEEEEEEcCHHHHHHHH-HhCCCEECCEEEEEEEC
Confidence 489999999999886 6889999999999999999999998 68999999999999987
No 43
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=6.7e-15 Score=94.99 Aligned_cols=62 Identities=23% Similarity=0.261 Sum_probs=55.1
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccchhh
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYLED 68 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~~~ 68 (145)
+|++||.|.+|++. .+++++|||||+|.+.++|..|++.|||..|.|+.|.|.||.++.+..
T Consensus 27 ~f~~~G~i~~i~~~------~~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v~~ak~~~~~~ 88 (91)
T d1nu4a_ 27 IFSRFGQILDILVS------RSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDII 88 (91)
T ss_dssp HHGGGSCEEEEECC------HHHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEEEECSSCCTHH
T ss_pred HhcccccccceEEe------eeccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeCCCchhh
Confidence 38999999998775 356789999999999999999999999999999999999999876543
No 44
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=2.1e-15 Score=99.01 Aligned_cols=63 Identities=25% Similarity=0.336 Sum_probs=57.2
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccch
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYL 66 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~ 66 (145)
+|++||.|..+.++. +..+|+++|||||+|.+.++|..||+.|||..|.|++|.|+||.++..
T Consensus 38 ~f~~~G~v~~~~~~~---~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~ak~k~~ 100 (102)
T d2cpxa1 38 LFARFQEKKGPPIQF---RMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFGKNKKQ 100 (102)
T ss_dssp HTHHHHHSSSSCCEE---EEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEECCCCSC
T ss_pred HHhhccceeeEEeec---ccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeCCCccc
Confidence 588999999988875 566899999999999999999999999999999999999999988653
No 45
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.47 E-value=1.7e-14 Score=95.61 Aligned_cols=59 Identities=17% Similarity=0.199 Sum_probs=53.5
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccchhh
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYLED 68 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~~~ 68 (145)
+|++||.|+++.++. ++|||||+|.+.++|.+|+..|||..|.|+.|.|.||.+.....
T Consensus 30 lF~~~G~i~~~~~~k---------~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~v~~a~~~~~~~ 88 (104)
T d1weya_ 30 LFRTYDKDTTFQYFK---------SFKRVRINFSNPLSAADARLRLHKTEFLGKEMKLYFAQTLHIGS 88 (104)
T ss_dssp HHHTTCSSCEEEEET---------TTTEEEEECSSTTHHHHHHHTSTTSEETTEECEEECCCCSSCCS
T ss_pred HhcccccceEEEEec---------CCCEEEEEECCHHHHHHHHHHhcccccCCCEeEEeecccCCCCC
Confidence 589999999998873 68999999999999999999999999999999999998775544
No 46
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.47 E-value=2.8e-14 Score=92.73 Aligned_cols=62 Identities=24% Similarity=0.360 Sum_probs=55.6
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhc------CCeeCCeeeEEEEccccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMH------GRLACGRPLVVRLASEKY 65 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~ln------g~~i~gr~l~V~~a~~~~ 65 (145)
+|++||.|.++.++. +..++.++|||||+|.+.++|..||+.+| |..|.|+.|.|.+|.++.
T Consensus 28 ~f~~~G~v~~~~~~~---~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr~l~v~~a~~k~ 95 (98)
T d1x4ha1 28 VLQQFGDLKYVRVVL---HPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGRQLKVDLAVTRD 95 (98)
T ss_dssp HHHTTSCEEEEECCB---CSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSCEEEEECCCCCC
T ss_pred HHhccccceeeeecc---ccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCEEEEEEECCCCC
Confidence 488999999998885 67788999999999999999999999886 677899999999998864
No 47
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=2.2e-14 Score=94.27 Aligned_cols=60 Identities=22% Similarity=0.436 Sum_probs=54.0
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEcccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~ 64 (145)
+|++||.|..+.++. + .++.++|||||+|.+.++|.+||+.|||..|.|+++.|.++.|-
T Consensus 38 ~F~~~G~i~~~~~~~---~-~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~~~Pl 97 (101)
T d1x5oa1 38 MLKPFGQVISTRILR---D-SSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPL 97 (101)
T ss_dssp TTTTTSCEEEEEEEE---C-SSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCCSSCB
T ss_pred HHhhcccccceeeec---c-cccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCCCCCc
Confidence 699999999998875 3 47889999999999999999999999999999999988877653
No 48
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.46 E-value=2e-14 Score=89.18 Aligned_cols=57 Identities=18% Similarity=0.373 Sum_probs=52.3
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a 61 (145)
+|++||.|..+.++. ++.+|.++|||||+|.+.++|..|++ +||+.|.|+.|.|++|
T Consensus 19 ~F~~~G~i~~~~~~~---~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 19 YFEQFGKVDDAMLMF---DKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp HHHTTSCCSEECCBC---CTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred HHHHhCCcceeeeee---eccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 489999999988875 67789999999999999999999995 9999999999999986
No 49
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=3.1e-14 Score=87.78 Aligned_cols=54 Identities=20% Similarity=0.386 Sum_probs=50.0
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeE
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLV 57 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~ 57 (145)
+|++||.|..++++. ++.++.++|||||+|.+.++|.+|+..|||..|.|+.|+
T Consensus 18 ~F~~~G~v~~~~~~~---~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 18 LCQPYGKIVSTKAIL---DKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp TSTTTSCEEEEEEEC---CSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred HHhhhcccccccccc---ccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 699999999998885 678999999999999999999999999999999998763
No 50
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.44 E-value=5.9e-14 Score=89.70 Aligned_cols=56 Identities=30% Similarity=0.428 Sum_probs=51.7
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~ 65 (145)
+|++||.|.+++++. .+|||||+|.+.++|..|+..|||..|.|+.|.|+||.+..
T Consensus 28 ~F~~~G~i~~i~~~~---------~k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~~~~ 83 (86)
T d2cpja1 28 LFEKYGKAGEVFIHK---------DKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSA 83 (86)
T ss_dssp HTSTTCCCSEEEEET---------TTTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESSCCS
T ss_pred HHHHhCCceEeeeec---------ccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCcC
Confidence 599999999999873 47999999999999999999999999999999999998764
No 51
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.43 E-value=2.1e-15 Score=97.60 Aligned_cols=59 Identities=15% Similarity=0.245 Sum_probs=53.0
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEcccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~ 64 (145)
+|++||.|.+++|+. ..+|+++|||||+|.+.++|.+||+ |||..|.|+.|.|++|+++
T Consensus 33 ~F~~~G~i~~~~v~~----~~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~~ak~k 91 (91)
T d1fjeb1 33 AISELFAKNDLAVVD----VRTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLEKPKGR 91 (91)
T ss_dssp HHHHHHHHHTCCCCE----EEEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEECCCCS
T ss_pred HHhcCCcEEEeeeee----cCCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEEecCCC
Confidence 488999999888863 4689999999999999999999995 9999999999999999864
No 52
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.43 E-value=4.4e-14 Score=93.74 Aligned_cols=56 Identities=20% Similarity=0.099 Sum_probs=50.4
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~ 65 (145)
+|++||.|..|.|. .++|||||+|.+.++|.+||+.|||..|.|++|.|+|+....
T Consensus 30 ~F~~fG~I~~v~l~---------~~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~~~~ 85 (111)
T d1whxa_ 30 TFSRFGSLGRVLLP---------EGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIGV 85 (111)
T ss_dssp HHHTTSCEEEEECC---------SSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEETTT
T ss_pred hhhccCCccEEEee---------ccCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECCCCc
Confidence 58999999998774 258999999999999999999999999999999999986654
No 53
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=1.1e-13 Score=89.81 Aligned_cols=58 Identities=28% Similarity=0.287 Sum_probs=52.0
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEcccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEK 64 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~ 64 (145)
+|++||.|..+.+.. ++.++|||||+|.+.++|..||+.|||+.|.|+.|.|+||++.
T Consensus 34 ~F~~~G~v~~~~~~~------~~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~a~~~ 91 (95)
T d1x4aa1 34 VFYKYGAIRDIDLKN------RRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSG 91 (95)
T ss_dssp HHGGGSCEEEEEECC------SSSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEECCCCC
T ss_pred HHhcCCceEEEEecc------cccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEeccCC
Confidence 589999999988753 3457899999999999999999999999999999999998764
No 54
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=4.6e-14 Score=93.44 Aligned_cols=57 Identities=21% Similarity=0.496 Sum_probs=51.7
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~ 65 (145)
+|++||.|.++.|+. | .+|||||+|.+.++|..||+.|||..|+|+.|.|+|+....
T Consensus 23 ~F~~fG~I~~v~i~~---~-----~kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~~~~ 79 (109)
T d2adca1 23 LFGVYGDVQRVKILF---N-----KKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQN 79 (109)
T ss_dssp HHHHHTCEEEEEECC---T-----TSCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCSCCC
T ss_pred HHhhccccceEEEEe---c-----ccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCCC
Confidence 589999999999985 3 37999999999999999999999999999999999987553
No 55
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=1.7e-13 Score=90.16 Aligned_cols=64 Identities=14% Similarity=0.198 Sum_probs=53.7
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccchhh
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYLED 68 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~~~ 68 (145)
+|++|| |+++.++.+ +..+|+++|||||+|.+.++|++|+ .||+..|.|+.|.|.+|.++....
T Consensus 35 ~f~~~g-~~~~~~~~~--~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~gr~l~V~~a~~~~~~~ 98 (104)
T d1wi8a_ 35 FFRGLN-ISAVRLPRE--PSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNKRIRVDVADQAQDKD 98 (104)
T ss_dssp HTTTSC-EEEEECCBC--SSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETTEECEEEECCCCCCCC
T ss_pred HHHHhc-cccceeeee--eccCCCcceeeeEEECCHHHHHHHH-HcCCCEECCEEEEEEECCCCCCCC
Confidence 589999 777877753 3457899999999999999998776 699999999999999998865443
No 56
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.40 E-value=7.6e-14 Score=90.69 Aligned_cols=66 Identities=21% Similarity=0.295 Sum_probs=54.3
Q ss_pred CCCCCcc-eeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcC--CeeCCeeeEEEEccccchhh
Q 032211 1 MFSPYGK-IVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHG--RLACGRPLVVRLASEKYLED 68 (145)
Q Consensus 1 lFs~~G~-I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng--~~i~gr~l~V~~a~~~~~~~ 68 (145)
+|++||. |.++.++.+ ...+|+++|||||+|.+.++|..|++.|++ ..++|++|.|.||.|+....
T Consensus 21 ~f~~~g~~i~~v~~~~~--~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~~A~p~~~~~ 89 (96)
T d2disa1 21 EIAKVTEGVLDVIVYAS--AADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDWAEPEIDVD 89 (96)
T ss_dssp HHHHHSTTEEEEECCSS--SCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEEESCSSCSTT
T ss_pred HHHHhCCcceEEEEeee--ccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEEEcCCCCCCC
Confidence 4889996 888888752 134689999999999999999999999864 45679999999998876554
No 57
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39 E-value=4.3e-14 Score=89.13 Aligned_cols=57 Identities=25% Similarity=0.384 Sum_probs=50.0
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCC-eeCCeeeEEEEccccch
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGR-LACGRPLVVRLASEKYL 66 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~-~i~gr~l~V~~a~~~~~ 66 (145)
+|++||.|.+++++. ++|||||+|.+.++|..|++.|||. .|.|++|.|+||.++..
T Consensus 21 ~F~~~G~i~~~~~~~---------~rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~k~~ 78 (80)
T d2cqha1 21 LFGDRKLPLAGQVLL---------KSGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVSKKL 78 (80)
T ss_dssp HHHHTTCCCSSCEEE---------ETTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCCCCC
T ss_pred HHHHhCcEEEeEEec---------ccceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCCcCc
Confidence 488999988766653 5899999999999999999999996 69999999999998653
No 58
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.38 E-value=3.5e-13 Score=85.80 Aligned_cols=57 Identities=14% Similarity=0.181 Sum_probs=51.4
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEcc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLAS 62 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~ 62 (145)
+|+.||+|.+++++. + .+|+++|||||+|.+.++|.+|| .++|..|.|+.|.|.|..
T Consensus 26 ~F~~~G~v~~v~l~~---~-~~~~~kG~afV~f~~~e~a~~al-~~~~~~~~g~~l~v~~~~ 82 (85)
T d1zh5a2 26 WLEDKGQVLNIQMRR---T-LHKAFKGSIFVVFDSIESAKKFV-ETPGQKYKETDLLILFKD 82 (85)
T ss_dssp HHTTSCCEEEEEEEE---C-TTCCEEEEEEEEESCHHHHHHHH-TCCCCEETTEECEEEEGG
T ss_pred HHHHhcccccceeee---e-ccCCcceEEEEEEcCHHHHHHHH-HHCCCEECCEEEEEEEcC
Confidence 489999999999875 3 47899999999999999999999 579999999999999864
No 59
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.38 E-value=4.2e-13 Score=87.86 Aligned_cols=57 Identities=23% Similarity=0.321 Sum_probs=51.5
Q ss_pred CCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccc
Q 032211 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65 (145)
Q Consensus 2 Fs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~ 65 (145)
|++||.|..+.+.. +.++||+||+|.+.++|.+|+..|||..|.||+|.|.++.++.
T Consensus 40 ~~~~G~V~~v~~~~-------~~~~G~~fV~f~~~e~A~~A~~~lng~~~~gr~i~v~~~~g~~ 96 (99)
T d2dita1 40 CSKFGQIRKLLLFD-------RHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTT 96 (99)
T ss_dssp GGGTSCCSEEEEET-------TCTTCEEEEECSCHHHHHHHHHHSTTCEETTEECEEEECCSCC
T ss_pred hcCcccEEEEeccC-------CCCccEEEEEECCHHHHHHHHHHhCCcEECCEEEEEEEeCCcC
Confidence 78999999998863 3468999999999999999999999999999999999987764
No 60
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.37 E-value=3.3e-13 Score=86.19 Aligned_cols=57 Identities=25% Similarity=0.274 Sum_probs=49.7
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCee-CCeeeEEEEcccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA-CGRPLVVRLASEK 64 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i-~gr~l~V~~a~~~ 64 (145)
+|++||.|.++.++. ++++|||||+|.+.++|..|+..|||..| +|+.|.|.|+++.
T Consensus 30 ~F~~~G~v~~~~~~~-------~~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~sk~~ 87 (88)
T d2adca2 30 LFSSNGGVVKGFKFF-------QKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKST 87 (88)
T ss_dssp HHHTTSCCEEEEEEC-------SSSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEECSSC
T ss_pred HhhccCCEEEEEEee-------ecccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEeCCCC
Confidence 488999998877652 34689999999999999999999999998 5899999998763
No 61
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.37 E-value=2.9e-13 Score=86.14 Aligned_cols=56 Identities=27% Similarity=0.381 Sum_probs=49.9
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~ 65 (145)
+|++||.|..+.+. +++|||||+|.+.++|..|+..|||..|.|+.|.|.||+|..
T Consensus 28 ~F~~~g~i~~~~~~---------~~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~akP~~ 83 (86)
T d2cpda1 28 EFNNIKPGAVERVK---------KIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKPVD 83 (86)
T ss_dssp HHHTTSTTCEEEEE---------ECSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCCCCC
T ss_pred hhcccceeeeEEEc---------cccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEeccCCC
Confidence 48899998776664 268999999999999999999999999999999999998764
No 62
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.36 E-value=1.9e-13 Score=86.95 Aligned_cols=58 Identities=24% Similarity=0.360 Sum_probs=50.1
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a 61 (145)
+|+.||.|....++. +..+|+++|||||+|.+.++|.+||+.||++.|.||+|.|++|
T Consensus 29 ~F~~~~~~~~~~~~~---~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l~ 86 (86)
T d2cqpa1 29 FFYGYQVIPGSVCLK---YNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG 86 (86)
T ss_dssp HTTTSCCCTTTCEEE---ECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred HHhhcccceeEEEEE---eCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 589999987643332 2357999999999999999999999999999999999999985
No 63
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.36 E-value=1.5e-13 Score=89.30 Aligned_cols=59 Identities=24% Similarity=0.331 Sum_probs=51.6
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccchh
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYLE 67 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~~ 67 (145)
+|++||.|..++ .+|+++|||||+|.+.++|..|+..|||..|.|++|.|.|+.++...
T Consensus 36 ~F~~~g~v~~~~--------~~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~a~~k~~~ 94 (96)
T d1fjca_ 36 VFEDALEIRLVS--------QDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKGGT 94 (96)
T ss_dssp HHCSEEEECCEE--------ETTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEECSSSCCC
T ss_pred HHHhcccceeee--------ecCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEEeCCCCCC
Confidence 488999876543 26778999999999999999999999999999999999999987643
No 64
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36 E-value=1.3e-13 Score=88.09 Aligned_cols=57 Identities=16% Similarity=0.132 Sum_probs=50.6
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccchh
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYLE 67 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~~ 67 (145)
+|++||.|.+++++. .|||||+|.+.++|..||..|||..|.|+.|.|.++.++...
T Consensus 20 ~F~~~G~v~~~~i~~----------~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~~~~~~ 76 (87)
T d3begb1 20 HMREAGDVCYADVYR----------DGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKVDG 76 (87)
T ss_dssp HHGGGSCEEEEEECT----------TSEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCEEEECC
T ss_pred HHhhhcccccccccc----------cceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEecCcCC
Confidence 589999999998862 489999999999999999999999999999999988766443
No 65
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.35 E-value=6.4e-13 Score=88.02 Aligned_cols=60 Identities=18% Similarity=0.217 Sum_probs=51.7
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeC--CeeeEEEEccccchh
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLAC--GRPLVVRLASEKYLE 67 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~--gr~l~V~~a~~~~~~ 67 (145)
+|++||.|.++.++. + +++|||||+|.+.++|..||..|||..|. ++.|.|.|+.+....
T Consensus 27 ~F~~~G~i~~~~i~~---~----~~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~~s~~~~~~ 88 (108)
T d2adba1 27 IFSKFGTVLKIITFT---K----NNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLN 88 (108)
T ss_dssp HHTTTSCEEEEEEEE---E----TTEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEEECSSCSCC
T ss_pred HHccCCcEEEEEEEe---e----CCCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEEecCCcccc
Confidence 599999999999985 2 25899999999999999999999999984 688999998776443
No 66
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.34 E-value=6.6e-13 Score=83.99 Aligned_cols=54 Identities=19% Similarity=0.355 Sum_probs=48.3
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeC-CeeeEEEEcc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLAC-GRPLVVRLAS 62 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~-gr~l~V~~a~ 62 (145)
+|++||.|.+++++. + .+|||||+|.+.++|..|+..|||+.|. |++|.|.||+
T Consensus 28 ~f~~~G~i~~v~~~~---~-----~~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v~~ak 82 (83)
T d2b0ga1 28 LFNQFPGFKEVRLVP---N-----RHDIAFVEFTTELQSNAAKEALQGFKITPTHAMKITFAK 82 (83)
T ss_dssp HHTTSTTEEEEEECT---T-----TCSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEEEECC
T ss_pred hhccCccEEEeeeec---c-----cceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEEEEec
Confidence 489999999999973 2 4799999999999999999999999984 6999999986
No 67
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33 E-value=3.7e-13 Score=88.33 Aligned_cols=64 Identities=13% Similarity=0.237 Sum_probs=53.6
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccchhh
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYLED 68 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~~~ 68 (145)
+|+.||.|..+.++. +..+|+++|||||+|.+.++|.+||. +||..|.|+.|.|.++.......
T Consensus 28 ~F~~~g~i~~~~~~~---~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~~~~~~~~~ 91 (103)
T d2cpya1 28 FLEGIPVDENAVHVL---VDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHVVTLEDMRE 91 (103)
T ss_dssp HTTTSCCCSTTEEEC---CCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEEEEECHHHHHH
T ss_pred hhcccceEEEEEEEE---eCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEEEECCHHHhhh
Confidence 589999987744443 45689999999999999999999995 99999999999999987655444
No 68
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.33 E-value=1.5e-12 Score=81.02 Aligned_cols=55 Identities=24% Similarity=0.248 Sum_probs=47.2
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~ 65 (145)
+|++|| +..+.+ ++++|||||+|.+.++|.+|+..|||..+.|++|.|+|+..+.
T Consensus 18 ~F~~~g-~~~~~~---------~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d~ 72 (75)
T d1wi6a1 18 LLSDYE-LKYCFV---------DKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTDA 72 (75)
T ss_dssp HTTTSC-EEEEEE---------ETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCSTT
T ss_pred HHhccc-ccceee---------cccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCCC
Confidence 589999 444433 3478999999999999999999999999999999999997653
No 69
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.30 E-value=8.6e-13 Score=86.17 Aligned_cols=57 Identities=16% Similarity=0.145 Sum_probs=51.4
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccchh
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYLE 67 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~~ 67 (145)
+|++||.|.++.|. ++|||||+|.+.++|..||+.|||..|.|+.|.|.++.++...
T Consensus 35 ~F~~~G~v~~~~i~----------~~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~~~~~~~ 91 (98)
T d1wg4a_ 35 HMREAGDVCYADVQ----------KDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRVYPER 91 (98)
T ss_dssp HHTTSSCEEEEEEE----------TTTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEEEEECCC
T ss_pred HHHhhccccccccc----------ccceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEEecCCCC
Confidence 58999999999886 3699999999999999999999999999999999998776543
No 70
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.29 E-value=3.6e-12 Score=81.75 Aligned_cols=56 Identities=30% Similarity=0.420 Sum_probs=49.5
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHh--cCCeeCCeeeEEEEccccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKM--HGRLACGRPLVVRLASEKY 65 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~l--ng~~i~gr~l~V~~a~~~~ 65 (145)
||++||.|.++.++. .++||||+|.+.++|..|++.+ ++..+.|++|.|.||.+..
T Consensus 29 lF~~fG~I~~i~i~~---------~k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~V~~s~~~~ 86 (89)
T d1x4da1 29 LVEPFGVISNHLILN---------KINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKYK 86 (89)
T ss_dssp TTGGGSCEEEEEECS---------SSSCEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEEECCCT
T ss_pred HHHhhCCeEEEEeec---------cceEEEEEEcchhhHHHHHHHHhhCCCccCCceEEEEECCCcc
Confidence 699999999999874 4689999999999999999966 6778999999999997643
No 71
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=1.4e-12 Score=83.38 Aligned_cols=55 Identities=20% Similarity=0.244 Sum_probs=46.3
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~ 65 (145)
+|++|| +..+.+ ++++|||||+|.+.++|..||+.|||+.|.|+.|.|+|+.++.
T Consensus 25 lF~~~G-~~~~~~---------~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~~~~ 79 (88)
T d1wg1a_ 25 LLKDYD-LKYCYV---------DRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTDA 79 (88)
T ss_dssp HTCSSC-CCCEEE---------EGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECCCCC
T ss_pred HHHhcC-ceeeee---------eccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCC
Confidence 589999 222222 3368999999999999999999999999999999999997654
No 72
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.29 E-value=2.6e-12 Score=83.94 Aligned_cols=56 Identities=29% Similarity=0.336 Sum_probs=50.0
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHH--HhcCCeeCCeeeEEEEccccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKE--KMHGRLACGRPLVVRLASEKY 65 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~--~lng~~i~gr~l~V~~a~~~~ 65 (145)
+|++||.|.++.++. ++|||||+|.+.++|..|++ .+++..|.|+.|.|.||....
T Consensus 39 ~F~~fG~V~~v~~~~---------~k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~V~~s~~~~ 96 (99)
T d1x4fa1 39 LAEPYGKIKNYILMR---------MKSQAFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEKYK 96 (99)
T ss_dssp TTTTTSCCSEEEEET---------TTTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCEEEEECSCS
T ss_pred hhccccceeEEEEee---------cCCcEEEEecchHHHHHHHHHHhcCCceECCEEEEEEEcCCcc
Confidence 699999999999873 47999999999999999997 578889999999999997654
No 73
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.28 E-value=2.3e-12 Score=83.78 Aligned_cols=56 Identities=32% Similarity=0.437 Sum_probs=49.9
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCC--eeeEEEEccccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACG--RPLVVRLASEKY 65 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~g--r~l~V~~a~~~~ 65 (145)
+|++||.|..++++. .++||||+|.+.++|..|++.||+..|.| ++|.|+||++.+
T Consensus 37 ~f~~~G~i~~~~~~~---------~~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~~ak~~~ 94 (97)
T d1whya_ 37 EFDRFGSIRTIDHVK---------GDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKSGP 94 (97)
T ss_dssp HHHTTSCEEEEEECS---------SSCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEEECCCCC
T ss_pred HHHhhcccceEeeec---------cccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEEeCCCCC
Confidence 489999999998863 47899999999999999999999999986 589999998754
No 74
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.27 E-value=2.9e-12 Score=84.22 Aligned_cols=63 Identities=22% Similarity=0.177 Sum_probs=54.0
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccchh
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYLE 67 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~~ 67 (145)
+|+.||.|....++. +..+++++|||||+|.+.++|.+|+ .+|++.|.||.|.|.++.+....
T Consensus 35 ~F~~~g~v~~~v~~~---~~~~~~~kG~afV~F~~~e~a~~a~-~~~~~~i~gR~i~V~~~~~~~~~ 97 (104)
T d1wg5a_ 35 FFSGLEIVPNGMTLP---VDFQGRSTGEAFVQFASQEIAEKAL-KKHKERIGHRYIEIFKSSRAEVR 97 (104)
T ss_dssp HTTTCCEEEEEEECC---BCSSSCBCSEEEEEESSHHHHHHHH-TTTTCCSSSSCCEEEEECTTTSC
T ss_pred HHHhcCCceEEEEEE---eCCCCCcceEEEEEeCCHHHHHHHH-hhCCCEEcceEEEEEECCHHHhc
Confidence 589999998865554 4568899999999999999999998 59999999999999998876433
No 75
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26 E-value=1.1e-11 Score=79.04 Aligned_cols=56 Identities=21% Similarity=0.270 Sum_probs=49.4
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHh--cCCeeCCeeeEEEEccccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKM--HGRLACGRPLVVRLASEKY 65 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~l--ng~~i~gr~l~V~~a~~~~ 65 (145)
+|++||.|.+++++. ++|||||+|.+.++|..|+..+ ++..+.|++|.|.|++.+.
T Consensus 28 ~f~~~G~i~~v~~~~---------~~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v~~sk~~~ 85 (88)
T d2cq1a1 28 LGLPFGKVTNILMLK---------GKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKE 85 (88)
T ss_dssp TTTTTSCEEEEEEET---------TTTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEECSCSS
T ss_pred HHhcccccccccccc---------cceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEEEECCCCC
Confidence 699999999998873 4689999999999999999865 5778999999999997654
No 76
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26 E-value=2.6e-12 Score=91.26 Aligned_cols=64 Identities=25% Similarity=0.315 Sum_probs=57.3
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccchhh
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYLED 68 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~~~ 68 (145)
+|+.||.|..+.|+. |..+|.++|||||+|.+.++|.+||. ++++.|.|+.|.|.+|.++....
T Consensus 117 ~f~~~G~v~~~~i~~---~~~~~~~~g~~fV~f~~~e~A~~Al~-~~~~~~~G~~i~V~~A~~k~e~~ 180 (183)
T d1u1qa_ 117 YFEQYGKIEVIEIMT---DRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKALSKQEMA 180 (183)
T ss_dssp HHGGGSCEEEEEEEE---CTTTCCEEEEEEEEESCHHHHHHHHT-SSCEEETTEEEEEEECCCHHHHH
T ss_pred hhccCCceeeeeeec---ccccCccceeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEecCCccccc
Confidence 488999999999986 67889999999999999999999995 79999999999999998875443
No 77
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.25 E-value=4.2e-12 Score=78.89 Aligned_cols=55 Identities=22% Similarity=0.199 Sum_probs=47.9
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a 61 (145)
+|++||.|.+++++. ++. ..+|||||+|.+.++|.+|+ .+|++.|+|++|.|+.+
T Consensus 20 ~F~~~G~I~~v~~~~---~~~--~~~~~afV~F~~~~~a~~Al-~~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 20 YFKHCGPIIHVDVAD---SLK--KNFRFARIEFARYDGALAAI-TKTHKVVGQNEIIVSHL 74 (75)
T ss_dssp HHGGGSCEEEEEEEE---CTT--SSSEEEEEEESSHHHHHHHH-TTTTCEETTEECEEEEC
T ss_pred HHhcCCceEEEEEEe---ecc--ccceEEEEEEcchHHhHHHH-HhcCcEECCEEEEEEEC
Confidence 489999999999986 333 34689999999999999998 69999999999999865
No 78
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.25 E-value=3.1e-12 Score=83.86 Aligned_cols=60 Identities=25% Similarity=0.190 Sum_probs=51.4
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccch
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYL 66 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~ 66 (145)
+|+.|| |..+.++. + .+|.++|||||+|.+.++|+.|+ .+|++.|.||.|.|.++.+...
T Consensus 35 ~F~~~~-~~~v~~~~---~-~~g~~~G~afVeF~~~~~a~~Al-~~~~~~i~gR~I~V~~s~~~~~ 94 (102)
T d1weza_ 35 FFSPLN-PMRVHIEI---G-PDGRVTGEADVEFATHEDAVAAM-AKDKANMQHRYVELFLNSTAGT 94 (102)
T ss_dssp SSCSCC-CSEEEEEE---S-SSSCEEEEEEEECSSSHHHHHHH-TTSSCCSSSSCCEEEEECCCCC
T ss_pred HHhccC-cceeeeEE---e-cCCcceEEEEEEECCHHHHHHHH-HcCCCEECCEEEEEEEcCCCCC
Confidence 689998 45677775 3 36889999999999999999998 5999999999999999887653
No 79
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24 E-value=6.8e-12 Score=82.58 Aligned_cols=61 Identities=20% Similarity=0.243 Sum_probs=52.7
Q ss_pred CCCCcceeEEEEeeccCCCCC--CCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccc
Q 032211 2 FSPYGKIVSEDFLWHTRGPKR--GVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKY 65 (145)
Q Consensus 2 Fs~~G~I~~~~i~~~~rd~~t--g~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~ 65 (145)
|++||.|.++.|+. ++.+ ....|++||.|.+.++|.+|+..|||..|+||.|.|.|+.+..
T Consensus 35 ~~k~G~v~~v~I~~---~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr~f~gR~v~v~f~~~~~ 97 (104)
T d1o0pa_ 35 CSKYGLVKSIEIPR---PVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDS 97 (104)
T ss_dssp HTTTSCEEEEECCC---CTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSCCSSSSCCEEEEECHHH
T ss_pred hcccCceEEEEEee---cCCCCccCCceEEEEEECCHHHHHHHHHHHCCCEECCeEEEEEEcCHHH
Confidence 78999999999874 3333 3457999999999999999999999999999999999987654
No 80
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.22 E-value=1.2e-12 Score=83.65 Aligned_cols=58 Identities=21% Similarity=0.263 Sum_probs=49.4
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccchhh
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYLED 68 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~~~ 68 (145)
+|++||.|.+++++. .++|||||+|.+.++|+.||. +++.|.|+.|.|++|.++....
T Consensus 25 ~F~~~G~v~~v~~~~--------~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a~~k~~~~ 82 (88)
T d1wf0a_ 25 FFSQYGDVMDVFIPK--------PFRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNAEPKHNSN 82 (88)
T ss_dssp HSTTTSCCCEEECCS--------SCCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECCCCCCCCC
T ss_pred HHHHcCCceEEEEee--------ccCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeCCCCCCCC
Confidence 599999999987642 368999999999999999984 8899999999999998765433
No 81
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.21 E-value=1.1e-11 Score=81.42 Aligned_cols=59 Identities=14% Similarity=0.158 Sum_probs=50.2
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHh--cCCeeCCeeeEEEEccccchhh
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKM--HGRLACGRPLVVRLASEKYLED 68 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~l--ng~~i~gr~l~V~~a~~~~~~~ 68 (145)
+|++||.|..+.+.. .+|||||+|.+.++|..|+..+ ++..+.|++|.|.|+..+....
T Consensus 35 ~F~~fG~I~~~~~~~---------~k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v~~s~~~~~~~ 95 (104)
T d1wexa_ 35 ALEKFGTICYVMMMP---------FKRQALVEFENIDSAKECVTFAADVPVYIAGQQAFFNYSTSKRITR 95 (104)
T ss_dssp HHTTTSCEEEEEEET---------TTTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEEEECSSSSCCC
T ss_pred hhhhcccceEEEEEe---------cceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEEEEcCCCccCC
Confidence 589999999998863 5799999999999999999987 4567889999999997754333
No 82
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12 E-value=5.5e-12 Score=83.97 Aligned_cols=62 Identities=18% Similarity=0.224 Sum_probs=52.6
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccch
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYL 66 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~ 66 (145)
+|+.||.|..+.++. +..+|.++|||||+|.+.++|.+|+ .+||..|+||.|.|..+.+...
T Consensus 38 ~F~~~g~~~~~~~~~---~~~~g~~~G~afVeF~~~e~a~~al-~~~~~~i~gR~i~V~~~~~~~~ 99 (112)
T d1wela1 38 FFKKLDIVEDSIYIA---YGPNGKATGEGFVEFRNEADYKAAL-CRHKQYMGNRFIQVHPITKKGM 99 (112)
T ss_dssp HSCSSCBCTTTCEEE---ECTTSSEEEEEEEEBSSSHHHHHHH-TSCSBCSTTSCBEEEEECHHHH
T ss_pred HHhhccccccceeee---cCcccceeeEEEEEECCHHHHHHHH-HcCCCcCCCEEEEEEEcChHHH
Confidence 589999987654443 3568999999999999999999998 5999999999999998877654
No 83
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.07 E-value=8.7e-11 Score=74.02 Aligned_cols=54 Identities=24% Similarity=0.354 Sum_probs=46.0
Q ss_pred CCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCee-eEEEEccccc
Q 032211 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRP-LVVRLASEKY 65 (145)
Q Consensus 2 Fs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~-l~V~~a~~~~ 65 (145)
|++||.|.++++. +++|||||+|.+.++|.+|| .+||..|.|+. |.|..+..+.
T Consensus 24 F~~~G~I~~~~~~---------~~~~~~fV~f~~~~~A~~Al-~~nG~~~~g~~~vgV~~~~~k~ 78 (81)
T d1wwha1 24 FAQYGNILKHVMS---------NTGNWMHIRYQSKLQARKAL-SKDGRIFGESIMIGVKPCIDKN 78 (81)
T ss_dssp HHTTSCEEEEEEC---------SSSSEEEEEESSHHHHHHHH-TTTTCEETTTEECEEEECCCHH
T ss_pred HHhhhhhheEEec---------CCCCEEEEEEcccHHHHHHH-hcCCCeECCcEEEEEEeCCChh
Confidence 8999999998764 25799999999999999999 59999999985 5688776653
No 84
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.99 E-value=1.4e-10 Score=77.14 Aligned_cols=59 Identities=20% Similarity=0.075 Sum_probs=49.7
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccH-HHHHHHHHHhcCCeeCCeeeEEEEccccchhh
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTK-EEAKLAKEKMHGRLACGRPLVVRLASEKYLED 68 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~-e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~~~ 68 (145)
+|++||+|.+|+|+. .+|||||.|.+. ++|..|+..+|+..+.++.+.|.++.......
T Consensus 31 ~F~~fG~V~~v~i~~---------~kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~~~~~~~e 90 (113)
T d1owxa_ 31 LFSNHGEIKWIDFVR---------GAKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWEVLEGEVE 90 (113)
T ss_dssp HTCSSCCEEEEECCT---------TCSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEEECCHHHH
T ss_pred HHHhcCChheEEEec---------CCceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEeeccchhh
Confidence 599999999999973 479999999985 78999999999999998888888876654433
No 85
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.95 E-value=1.3e-10 Score=75.96 Aligned_cols=42 Identities=21% Similarity=0.300 Sum_probs=38.1
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCee
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLA 51 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i 51 (145)
+|++||.|.+++++. .+|||||+|.+.++|..|+..|||+.|
T Consensus 40 ~F~~~G~i~~i~~~~---------~k~~aFV~f~~~e~A~~A~~~lng~~i 81 (101)
T d2cq2a1 40 VLEKCGLVDALLMPP---------NKPYSFARYRTTEESKRAYVTLNGKEV 81 (101)
T ss_dssp HHHHHSCEEEEECCT---------TCSCEEEEESSHHHHHHHHHHTTTCEE
T ss_pred HHHhhCcccEEeecc---------CccEEEEEECCHHHHHHHHHHhCCCCC
Confidence 589999999988763 478999999999999999999999987
No 86
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.90 E-value=2.2e-12 Score=82.55 Aligned_cols=60 Identities=18% Similarity=0.258 Sum_probs=47.1
Q ss_pred CCCCCcceeEEEEeecc--CCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEc
Q 032211 1 MFSPYGKIVSEDFLWHT--RGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLA 61 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~--rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a 61 (145)
+|++||.|..+.+.... .+..+++++|||||+|.+.++|..|+ .|||+.|.|+.|.|+.+
T Consensus 21 ~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~-~l~g~~~~Gr~l~V~r~ 82 (90)
T d1u2fa_ 21 FFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAM-AFDGIIFQGQSLKIRRP 82 (90)
T ss_dssp HHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGG-GGSSCCSSSSCCCCBCT
T ss_pred HHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHH-hhCCcEECCEEEEECCC
Confidence 36778877665543210 14567889999999999999999998 59999999999999743
No 87
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.71 E-value=1.6e-08 Score=71.13 Aligned_cols=64 Identities=23% Similarity=0.357 Sum_probs=54.1
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccccchhh
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYLED 68 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~~~~~~ 68 (145)
+|++||.|.++.++. ++.+|.++|||||+|.+.++|..|+. +++..+.++.+.+....+.....
T Consensus 26 ~F~~~G~v~~~~~~~---~~~~~~~~g~afv~f~~~~~a~~a~~-~~~~~~~~~~~~~~~~~~~~~~~ 89 (183)
T d1u1qa_ 26 HFEQWGTLTDCVVMR---DPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAVSREDSQ 89 (183)
T ss_dssp HHGGGSCEEEEEEEE---CTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEECCCTTGGG
T ss_pred HHHHcCCEEEEEeee---cccCCCccCceecccCCHHHHHHHHH-hcCCcccccchhhhhhhhccccc
Confidence 489999999999985 78899999999999999999999985 56777888888888766654433
No 88
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.93 E-value=0.00084 Score=40.02 Aligned_cols=57 Identities=21% Similarity=0.208 Sum_probs=47.8
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEEccc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRLASE 63 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~a~~ 63 (145)
+|.++|+|.++.+..+ ..| --.|-|...+..+|..|+..|+.+.|++++|.|.++..
T Consensus 16 ~f~~h~~V~sv~l~~~----~dg--~~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~~ 72 (73)
T d2dgxa1 16 AFARHGKVKSVELSPH----TDY--QLKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLATG 72 (73)
T ss_dssp HHHHHSCEEEEEECSC----CST--TCCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred HHHhheeEEEEEEEec----cCC--cEEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEecC
Confidence 3788999999988742 222 24689999999999999999999999999999998753
No 89
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.50 E-value=0.001 Score=41.54 Aligned_cols=47 Identities=19% Similarity=0.285 Sum_probs=41.5
Q ss_pred CCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhcCCeeCCeeeEEEE
Q 032211 2 FSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMHGRLACGRPLVVRL 60 (145)
Q Consensus 2 Fs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~lng~~i~gr~l~V~~ 60 (145)
|+.||.|.-+|++. +--.|+|.+-..|.+|+ .++|..+.|+.|.|..
T Consensus 45 l~~~GeViLvRFv~-----------d~mwVTF~dG~SAL~al-~l~g~~v~G~~l~It~ 91 (95)
T d1ufwa_ 45 LGSYGTIVLVRINQ-----------GQMLVTFADSHSALSVL-DVDGMKVKGRAVKISG 91 (95)
T ss_dssp HHHHSCCSEEEEET-----------TEEEEECSCSHHHHHHH-HGGGSEETTEEEEEEC
T ss_pred HhhCCeEEEEEEeC-----------CeEEEEECCcHHHHHHh-ccCCeEEcceEEEEec
Confidence 67899999998873 45789999999999998 7999999999999975
No 90
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.86 E-value=15 Score=21.69 Aligned_cols=36 Identities=22% Similarity=0.476 Sum_probs=28.6
Q ss_pred cEEEEEEccHHHHHHHHHHhcCCeeCC-----eeeEEEEcc
Q 032211 27 GFAFIEYSTKEEAKLAKEKMHGRLACG-----RPLVVRLAS 62 (145)
Q Consensus 27 G~~FV~f~~~e~A~~Ai~~lng~~i~g-----r~l~V~~a~ 62 (145)
.-|+|.|.+.++...-.+.++|+.|.+ .+-.|++|-
T Consensus 46 SRAYi~F~~~~~v~~F~~~f~g~~F~D~~g~~~~a~VE~AP 86 (91)
T d1uw4a_ 46 ARAYINFKNQEDIILFRDRFDGYVFLDNKGQEYPAIVEFAP 86 (91)
T ss_dssp EEEEEEESSSHHHHHHHHHHTTCEEECTTCCEEECEEEECS
T ss_pred eEEEEEeCCHHHHHHHHHHcCCcEEEcCCCCEeeeEEEEcC
Confidence 578999999999999999999999843 233566654
No 91
>d1g6pa_ b.40.4.5 (A:) Major cold shock protein {Thermotoga maritima [TaxId: 2336]}
Probab=27.58 E-value=15 Score=20.13 Aligned_cols=11 Identities=27% Similarity=0.712 Sum_probs=9.0
Q ss_pred CccEEEEEEcc
Q 032211 25 PRGFAFIEYST 35 (145)
Q Consensus 25 skG~~FV~f~~ 35 (145)
.||||||+-.+
T Consensus 11 ~kGfGFI~~~~ 21 (66)
T d1g6pa_ 11 KKGYGFITKDE 21 (66)
T ss_dssp TTTEEEEEETT
T ss_pred CCCeeEEEecC
Confidence 58999999754
No 92
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.12 E-value=20 Score=21.62 Aligned_cols=36 Identities=25% Similarity=0.481 Sum_probs=26.6
Q ss_pred CCCCCcceeEEEEeeccCCCCCCCCccEEEEEEccHHHHHHHHHHhc
Q 032211 1 MFSPYGKIVSEDFLWHTRGPKRGVPRGFAFIEYSTKEEAKLAKEKMH 47 (145)
Q Consensus 1 lFs~~G~I~~~~i~~~~rd~~tg~skG~~FV~f~~~e~A~~Ai~~ln 47 (145)
||++||.|. |.-+ |. --|||...+.++|..++..++
T Consensus 35 lFSpfG~V~-VswI----dd------TSa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 35 LFSAFGNIQ-ISWI----DD------TSAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp HHTTTCSCC-CEEE----ET------TEEEEECSCHHHHHHHHHHHH
T ss_pred HhcCCCceE-EEEe----cC------ceEEEEecCHHHHHHHHHHhc
Confidence 589999874 3333 22 269999999999998887654
No 93
>d1c9oa_ b.40.4.5 (A:) Major cold shock protein {Bacillus caldolyticus [TaxId: 1394]}
Probab=25.23 E-value=16 Score=20.01 Aligned_cols=11 Identities=36% Similarity=0.818 Sum_probs=8.7
Q ss_pred CccEEEEEEcc
Q 032211 25 PRGFAFIEYST 35 (145)
Q Consensus 25 skG~~FV~f~~ 35 (145)
.||||||+-.+
T Consensus 12 ~kGfGFI~~d~ 22 (66)
T d1c9oa_ 12 EKGYGFIEVEG 22 (66)
T ss_dssp TTTEEEEEETT
T ss_pred CCCEEEEEecC
Confidence 48999998754
No 94
>d1h95a_ b.40.4.5 (A:) Y-box protein 1 cold shock domain (YB1-CSD) {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.64 E-value=16 Score=20.79 Aligned_cols=11 Identities=27% Similarity=0.685 Sum_probs=8.9
Q ss_pred CccEEEEEEcc
Q 032211 25 PRGFAFIEYST 35 (145)
Q Consensus 25 skG~~FV~f~~ 35 (145)
.||||||+-.+
T Consensus 19 ~KGfGFI~~dd 29 (79)
T d1h95a_ 19 RNGYGFINRND 29 (79)
T ss_dssp TTTEEEEEEGG
T ss_pred CCCeEEEEECC
Confidence 48999999654
No 95
>d1mjca_ b.40.4.5 (A:) Major cold shock protein {Escherichia coli [TaxId: 562]}
Probab=23.41 E-value=18 Score=19.99 Aligned_cols=11 Identities=36% Similarity=0.739 Sum_probs=8.9
Q ss_pred CccEEEEEEcc
Q 032211 25 PRGFAFIEYST 35 (145)
Q Consensus 25 skG~~FV~f~~ 35 (145)
.+|||||+-.+
T Consensus 14 ~kGfGFI~~d~ 24 (69)
T d1mjca_ 14 DKGFGFITPDD 24 (69)
T ss_dssp TTTEEEEEETT
T ss_pred CCCEEEEEEcC
Confidence 48999998654
Done!