Citrus Sinensis ID: 032213

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-----
Protein Sequence
MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVPFPILSNFSSNSQTLDGTKGRDLRFLLEEQKQRY
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHHHHHcccccccccccccccEEHHHHHHHHHHHcccccccccccHHcHHHHHHHHHHHHccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHccccHHHHHHHHHHHHHHHHEccccccccccccccHHHHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHHHHccccHcccccHHHHHHHccccccccccccccccEEEcccccccccccccccEEcccccccc
Coil and Loop (DISEMBL)
mspewqnsglitvksdvYSFGVVLLEIVCCrsnfevnvSTADVVLLSTWVYNCFIAKELnklvgedeevdLRTLETMVRVRLLCiqdepnlrpsMKNVILMLEgtmeipvvpfpilsnfssnsqtldgtkgrDLRFLLEEQKQRY
Flexible Loop (DISEMBL)
mspewqnsglitvksdvYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKElnklvgedeeVDLRTLETMVRVRLlciqdepnlrpSMKNVILMLEGTMEIPVVPFPILSNFSsnsqtldgtkgrDLRFLLEEQKQRY
Low Complexity Region (SEG)
MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVPFPILSNFSSNSQTLDGTKGRDLRFLLEEQKQRY
Disordered region (IsUnstruct)
********GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVPFPILSNF**************************
Disordered Region (DISOPRED)
MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNF*****TAD*VLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVPFP*******************************
Disordered Region (DISEMBL)
********GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVPFPILSNFSSNSQTLDGTKGRDLRFLLEEQKQRY
Disordered Region (DISPRO)
*SPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVPFPILSNFSSN***********************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVPFPILSNFSSNSQTLDGTKGRDLRFLLEEQKQRY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	145	2.2.26 [Sep-21-2011]
Q39202	832	G-type lectin S-receptor-	no	no	0.834	0.145	0.415	8e-21
Q9XID3	829	G-type lectin S-receptor-	no	no	0.855	0.149	0.401	2e-16
Q9M345	677	L-type lectin-domain cont	no	no	0.889	0.190	0.313	1e-13
Q9FLV4	872	G-type lectin S-receptor-	no	no	0.744	0.123	0.401	2e-13
Q9M0G5	625	Putative cysteine-rich re	no	no	0.813	0.188	0.362	2e-13
O64477	828	G-type lectin S-receptor-	no	no	0.779	0.136	0.347	4e-13
O81291	669	L-type lectin-domain cont	no	no	0.737	0.159	0.327	1e-12
Q9FXF2	1021	Probable LRR receptor-lik	no	no	0.731	0.103	0.389	1e-12
Q9FIF1	674	Probable L-type lectin-do	no	no	0.951	0.204	0.294	2e-12
O81292	674	L-type lectin-domain cont	no	no	0.737	0.158	0.336	2e-12

>sp|Q39202|RLK1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2

 Score = 99.0 bits (245), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 54/130 (41%), Positives = 79/130 (60%), Gaps = 9/130 (6%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           ++PEW  +  IT K DVYS+GV+LLEIVCC+      V   D V+L  W Y+CF    L 
Sbjct: 700 VAPEWFRNSPITSKVDVYSYGVMLLEIVCCKK----AVDLEDNVILINWAYDCFRQGRLE 755

Query: 61  KLVGEDEEV--DLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEI--PVVPFPIL 116
            L  +D E   D+ T+E  V++ + CIQ+E  +RP+M+NV  MLEG +++  P  P P  
Sbjct: 756 DLTEDDSEAMNDMETVERYVKIAIWCIQEEHGMRPNMRNVTQMLEGVIQVFDPPNPSP-Y 814

Query: 117 SNFSSNSQTL 126
           S F+ + ++L
Sbjct: 815 STFTWSDESL 824

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9XID3|Y1343_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS=Arabidopsis thaliana GN=At1g34300 PE=1 SV=1

 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/132 (40%), Positives = 76/132 (57%), Gaps = 8/132 (6%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKE-- 58
           ++PEW  +  IT KSDVYS+G+VLLE+V  + NF+V+  T +    S W Y  F      
Sbjct: 652 LAPEWLANLPITSKSDVYSYGMVLLELVSGKRNFDVSEKT-NHKKFSIWAYEEFEKGNTK 710

Query: 59  --LNKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEI--PVVPFP 114
             L+  + ED+ VD+  +  MV+    CIQ++P  RP+M  V+ MLEG  EI  P+ P  
Sbjct: 711 AILDTRLSEDQTVDMEQVMRMVKTSFWCIQEQPLQRPTMGKVVQMLEGITEIKNPLCPKT 770

Query: 115 ILS-NFSSNSQT 125
           I   +FS NS +
Sbjct: 771 ISEVSFSGNSMS 782

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9M345|LRK42_ARATH L-type lectin-domain containing receptor kinase IV.2 OS=Arabidopsis thaliana GN=LECRK42 PE=2 SV=1

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 8/137 (5%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           ++PE   +G  T  +DVY+FG  LLE+V  R   E + ++ D  LL  WV++ ++    N
Sbjct: 515 LAPEHSRTGRATTTTDVYAFGAFLLEVVSGRRPIEFHSASDDTFLLVEWVFSLWLRG--N 572

Query: 61  KLVGEDEEV-----DLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIP-VVPFP 114
            +  +D ++     DL  +E ++++ LLC   +P  RPSM+ V+  L G M +P + P  
Sbjct: 573 IMEAKDPKLGSSGYDLEEVEMVLKLGLLCSHSDPRARPSMRQVLQYLRGDMALPELTPLD 632

Query: 115 ILSNFSSNSQTLDGTKG 131
           + +    N    DG  G
Sbjct: 633 LSAGSVMNLGGRDGFSG 649

Required during pollen development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FLV4|Y5248_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana GN=At5g24080 PE=2 SV=1

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 70/122 (57%), Gaps = 14/122 (11%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVY----NCFIA 56
           ++PEW ++  ITVK+DVYS+G++LLEIV  R N +++    D      W Y    N    
Sbjct: 699 LAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSYDAED-FFYPGWAYKELTNGTSL 757

Query: 57  KELNKL---VGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTM-EIPVVP 112
           K ++K    V E+EEV        ++V   CIQDE ++RPSM  V+ +LEGT  EI + P
Sbjct: 758 KAVDKRLQGVAEEEEV-----VKALKVAFWCIQDEVSMRPSMGEVVKLLEGTSDEINLPP 812

Query: 113 FP 114
            P
Sbjct: 813 MP 814

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9M0G5|CRK43_ARATH Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=3 SV=1

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/127 (36%), Positives = 76/127 (59%), Gaps = 9/127 (7%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVL--LSTWVYNCFIAKE 58
           M+PE+ + G ++ K D YSFGV++LEI    S F  N   +D  L  L T V+ CF + +
Sbjct: 503 MAPEYISKGRLSNKIDAYSFGVLVLEIT---SGFRNNKFRSDNSLETLVTQVWKCFASNK 559

Query: 59  LNKLVGED--EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVPFPIL 116
           + +++ +D  E+ D + ++ ++++ LLC Q+ P LRP+M  VI M+  T +I V+P P  
Sbjct: 560 MEEMIDKDMGEDTDKQEMKRVMQIGLLCTQESPQLRPTMSKVIQMVSST-DI-VLPTPTK 617

Query: 117 SNFSSNS 123
             F  +S
Sbjct: 618 PPFLHDS 624

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O64477|Y2913_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana GN=At2g19130 PE=2 SV=1

 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 5/118 (4%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAK-EL 59
           ++PEW +   IT K+DVYS+G++L E+V  R N E +     V    +W         ++
Sbjct: 662 LAPEWISGVAITAKADVYSYGMMLFELVSGRRNTEQS-ENEKVRFFPSWAATILTKDGDI 720

Query: 60  NKLVG---EDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVPFP 114
             LV    E + VD+  +    +V   CIQDE + RP+M  V+ +LEG +E+   PFP
Sbjct: 721 RSLVDPRLEGDAVDIEEVTRACKVACWCIQDEESHRPAMSQVVQILEGVLEVNPPPFP 778

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81291|LRK44_ARATH L-type lectin-domain containing receptor kinase IV.4 OS=Arabidopsis thaliana GN=LECRK44 PE=3 SV=1

 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 65/113 (57%), Gaps = 6/113 (5%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           ++P+   +G  T  +DV++FGV+LLE+ C R   E+N  + + V+L  WV+  ++  E N
Sbjct: 518 LAPDHIRTGRATTTTDVFAFGVLLLEVACGRRPIEINNQSGERVVLVDWVFRFWM--EAN 575

Query: 61  KLVGED----EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIP 109
            L  +D     E D + +E ++++ LLC   +P  RP+M+ V+  L G   +P
Sbjct: 576 ILDAKDPNLGSEYDQKEVEMVLKLGLLCSHSDPLARPTMRQVLQYLRGDAMLP 628

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FXF2|RKF1_ARATH Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1

 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 62/113 (54%), Gaps = 7/113 (6%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVC--CRSNFEVNVSTADVVLLSTWVYNCFIAKE 58
           M+PE+   G +T K+DVYSFGV++LEIV     SNF   +   D V L  +   C  +  
Sbjct: 850 MAPEYALWGYLTFKADVYSFGVLVLEIVAGITNSNF---MGAGDSVCLLEFANECVESGH 906

Query: 59  LNKLVGED--EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIP 109
           L ++V E    EVD +  E +++V L+C    P  RP M  V+ MLEG   +P
Sbjct: 907 LMQVVDERLRPEVDRKEAEAVIKVALVCSSASPTDRPLMSEVVAMLEGLYPVP 959

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FIF1|LRK21_ARATH Probable L-type lectin-domain containing receptor kinase II.1 OS=Arabidopsis thaliana GN=LECRK21 PE=2 SV=1

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 8/146 (5%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           M+PE    G+ T  +DVY+FG  +LE+VC R   + +     V+L+  WV +C     L 
Sbjct: 523 MAPELTAMGVTTTCTDVYAFGAFILEVVCGRRPVDPDAPREQVILVK-WVASCGKRDALT 581

Query: 61  KLVGEDEEVDLRTLET--MVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVPFPILS- 117
             V + + +D +  E   ++++ +LC Q  P  RPSM+ ++  LEG + +P + F  ++ 
Sbjct: 582 DTV-DSKLIDFKVEEAKLLLKLGMLCSQINPENRPSMRQILQYLEGNVSVPAISFGTVAL 640

Query: 118 ---NFSSNSQTLDGTKGRDLRFLLEE 140
              N S  + T   T      F  E+
Sbjct: 641 GIPNISHETVTQMTTTSSSANFSFED 666

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81292|LRK43_ARATH L-type lectin-domain containing receptor kinase IV.3 OS=Arabidopsis thaliana GN=LECRK43 PE=2 SV=1

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 65/113 (57%), Gaps = 6/113 (5%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           ++P+   +G  T  +DV++FGV+LLE+ C R   E+ + + + VLL   V+  +I  E N
Sbjct: 523 LAPDHVRTGRATTATDVFAFGVLLLEVACGRRPIEIEIESDESVLLVDSVFGFWI--EGN 580

Query: 61  KLVGEDEEV----DLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIP 109
            L   D  +    D R +ET++++ LLC   +P +RP+M+ V+  L G   +P
Sbjct: 581 ILDATDPNLGSVYDQREVETVLKLGLLCSHSDPQVRPTMRQVLQYLRGDATLP 633

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	145
296088601	573	unnamed protein product [Vitis vinifera]	0.772	0.195	0.690	1e-38
225431571	762	PREDICTED: G-type lectin S-receptor-like	0.772	0.146	0.690	1e-38
359477048	792	PREDICTED: G-type lectin S-receptor-like	0.772	0.141	0.654	6e-38
225431567	762	PREDICTED: G-type lectin S-receptor-like	0.772	0.146	0.672	1e-37
296088600	623	unnamed protein product [Vitis vinifera]	0.772	0.179	0.672	1e-37
147782422	762	hypothetical protein VITISV_038481 [Viti	0.772	0.146	0.672	1e-37
224116040	781	predicted protein [Populus trichocarpa]	0.765	0.142	0.580	3e-33
224105677	360	predicted protein [Populus trichocarpa]	0.765	0.308	0.580	3e-33
359477052	767	PREDICTED: G-type lectin S-receptor-like	0.779	0.147	0.587	8e-33
147867430	930	hypothetical protein VITISV_038238 [Viti	0.806	0.125	0.567	2e-32

>gi|296088601|emb|CBI37592.3| unnamed protein product [Vitis vinifera]

 Score =  164 bits (415), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 78/113 (69%), Positives = 97/113 (85%), Gaps = 1/113 (0%)

Query: 2   SPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNK 61
           +PE Q   LI+V++DVYSFGVVLLEIVCCRSN ++NVST D +LL +WVY+CF+A+EL K
Sbjct: 457 APERQKRMLISVEADVYSFGVVLLEIVCCRSNLDINVSTGDEILLCSWVYSCFVARELEK 516

Query: 62  LVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVPFP 114
           LV E EEV+++TLE MV+V LLCIQD+P+LRP+MKNVILMLEGTM +PV P P
Sbjct: 517 LV-EGEEVNMKTLERMVKVGLLCIQDDPSLRPTMKNVILMLEGTMNVPVPPSP 568

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431571|ref|XP_002276322.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Vitis vinifera]

 Score =  164 bits (415), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 78/113 (69%), Positives = 97/113 (85%), Gaps = 1/113 (0%)

Query: 2   SPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNK 61
           +PE Q   LI+V++DVYSFGVVLLEIVCCRSN ++NVST D +LL +WVY+CF+A+EL K
Sbjct: 646 APERQKRMLISVEADVYSFGVVLLEIVCCRSNLDINVSTGDEILLCSWVYSCFVARELEK 705

Query: 62  LVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVPFP 114
           LV E EEV+++TLE MV+V LLCIQD+P+LRP+MKNVILMLEGTM +PV P P
Sbjct: 706 LV-EGEEVNMKTLERMVKVGLLCIQDDPSLRPTMKNVILMLEGTMNVPVPPSP 757

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359477048|ref|XP_002275811.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Vitis vinifera]

 Score =  162 bits (409), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 74/113 (65%), Positives = 95/113 (84%), Gaps = 1/113 (0%)

Query: 2   SPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNK 61
           +PEW  + LI+VK+D+YSFGVVLLEIVCCR + EV VSTAD ++LS+WVY C +A+EL+K
Sbjct: 678 APEWHKNTLISVKADIYSFGVVLLEIVCCRRSIEVKVSTADEIILSSWVYGCLVARELDK 737

Query: 62  LVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVPFP 114
           LVG DE+V+ ++LE MV+V L C+QD+P LRPSMKNVILMLEGT++IP  P P
Sbjct: 738 LVG-DEQVEFKSLERMVKVGLWCVQDDPALRPSMKNVILMLEGTVDIPFPPSP 789

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431567|ref|XP_002276274.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Vitis vinifera]

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 76/113 (67%), Positives = 97/113 (85%), Gaps = 1/113 (0%)

Query: 2   SPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNK 61
           +PE Q   LI+V++DVYSFGVVLLEIVCCRSN ++NVST D +LL +WVY+CF+A+EL K
Sbjct: 646 APERQKRMLISVEADVYSFGVVLLEIVCCRSNLDINVSTGDEILLCSWVYSCFVARELEK 705

Query: 62  LVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVPFP 114
           LV E  EV+++TLE MV+V LLCIQD+P+LRP+MKNVILMLEGT+++PV P P
Sbjct: 706 LV-EGAEVNMKTLERMVKVGLLCIQDDPSLRPTMKNVILMLEGTVDVPVPPSP 757

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088600|emb|CBI37591.3| unnamed protein product [Vitis vinifera]

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 76/113 (67%), Positives = 97/113 (85%), Gaps = 1/113 (0%)

Query: 2   SPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNK 61
           +PE Q   LI+V++DVYSFGVVLLEIVCCRSN ++NVST D +LL +WVY+CF+A+EL K
Sbjct: 436 APERQKRMLISVEADVYSFGVVLLEIVCCRSNLDINVSTGDEILLCSWVYSCFVARELEK 495

Query: 62  LVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVPFP 114
           LV E  EV+++TLE MV+V LLCIQD+P+LRP+MKNVILMLEGT+++PV P P
Sbjct: 496 LV-EGAEVNMKTLERMVKVGLLCIQDDPSLRPTMKNVILMLEGTVDVPVPPSP 547

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147782422|emb|CAN72833.1| hypothetical protein VITISV_038481 [Vitis vinifera]

 Score =  160 bits (406), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 76/113 (67%), Positives = 97/113 (85%), Gaps = 1/113 (0%)

Query: 2   SPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNK 61
           +PE Q   LI+V++DVYSFGVVLLEIVCCRSN ++NVST D +LL +WVY+CF+A+EL K
Sbjct: 646 APERQKRMLISVEADVYSFGVVLLEIVCCRSNLDINVSTGDEILLCSWVYSCFVARELEK 705

Query: 62  LVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVPFP 114
           LV E  EV+++TLE MV+V LLCIQD+P+LRP+MKNVILMLEGT+++PV P P
Sbjct: 706 LV-EGXEVNMKTLERMVKVGLLCIQDDPSLRPTMKNVILMLEGTVDVPVPPSP 757

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116040|ref|XP_002332033.1| predicted protein [Populus trichocarpa] gi|222875258|gb|EEF12389.1| predicted protein [Populus trichocarpa]

 Score =  146 bits (369), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 65/112 (58%), Positives = 91/112 (81%), Gaps = 1/112 (0%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           M+PEWQN+ L++VK+D+YSFGVVLLEI+CCRS+ +V+VST D + L +W Y CF A +L+
Sbjct: 662 MAPEWQNNALMSVKADIYSFGVVLLEIICCRSSIKVDVSTPDEMNLPSWAYQCFAAGQLD 721

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVP 112
           KLV +DE+++  +LE MV++ LLC+Q +P LRP +KNVILMLEG+ +IP  P
Sbjct: 722 KLV-KDEDIEFESLERMVKIGLLCVQHDPALRPCIKNVILMLEGSDDIPAPP 772

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224105677|ref|XP_002333780.1| predicted protein [Populus trichocarpa] gi|222838481|gb|EEE76846.1| predicted protein [Populus trichocarpa]

 Score =  146 bits (368), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 65/112 (58%), Positives = 91/112 (81%), Gaps = 1/112 (0%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           M+PEWQN+ L++VK+D+YSFGVVLLEI+CCRS+ +V+VST D + L +W Y CF A +L+
Sbjct: 241 MAPEWQNNALMSVKADIYSFGVVLLEIICCRSSIKVDVSTPDEMNLPSWAYQCFAAGQLD 300

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVP 112
           KLV +DE+++  +LE MV++ LLC+Q +P LRP +KNVILMLEG+ +IP  P
Sbjct: 301 KLV-KDEDIEFESLERMVKIGLLCVQHDPALRPCIKNVILMLEGSDDIPAPP 351

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359477052|ref|XP_002276297.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Vitis vinifera]

 Score =  145 bits (365), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 67/114 (58%), Positives = 90/114 (78%), Gaps = 1/114 (0%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           ++PEWQ +  I+VK+DVYS+G+VLLE+VCCR N EVNVS  + ++LS W Y CF+A EL+
Sbjct: 650 LAPEWQQNIPISVKADVYSYGIVLLELVCCRRNLEVNVSEPEEIVLSNWAYKCFVAGELH 709

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVPFP 114
           KL+G  EEV+ ++LE MV++ L CIQDEP LRPS+K+++LMLEG  EI V P P
Sbjct: 710 KLLG-GEEVERKSLEQMVKLGLWCIQDEPALRPSIKSIVLMLEGITEIAVPPCP 762

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147867430|emb|CAN78998.1| hypothetical protein VITISV_038238 [Vitis vinifera]

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 67/118 (56%), Positives = 91/118 (77%), Gaps = 1/118 (0%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           ++PEWQ +  I+VK+DVYS+G+VLLE+VCCR N EVNVS  + ++LS W Y CF+A EL 
Sbjct: 813 LAPEWQQNIPISVKADVYSYGIVLLELVCCRRNLEVNVSKPEEIVLSNWAYKCFVAGELY 872

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVPFPILSN 118
           KL+G  EEV+ ++LE MV++ L CIQDEP LRPS+K+++LMLEG  EI V P P  ++
Sbjct: 873 KLLG-GEEVERKSLEEMVKLGLWCIQDEPALRPSIKSIVLMLEGITEIAVPPCPTTTS 929

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	145
TAIR|locus:2026155	829	AT1G34300 [Arabidopsis thalian	0.855	0.149	0.401	6.7e-16
TAIR|locus:2139845	625	AT4G28670 [Arabidopsis thalian	0.813	0.188	0.362	1.6e-13
TAIR|locus:2099941	684	AT3G55550 [Arabidopsis thalian	0.889	0.188	0.313	3e-13
TAIR|locus:2084375	677	AT3G53810 [Arabidopsis thalian	0.889	0.190	0.313	1e-12
TAIR|locus:2059103	828	AT2G19130 [Arabidopsis thalian	0.779	0.136	0.347	1.8e-12
TAIR|locus:2168509	674	AT5G59260 [Arabidopsis thalian	0.951	0.204	0.294	3.5e-12
TAIR|locus:2203847	1021	RKF1 "receptor-like kinase in	0.731	0.103	0.389	4.9e-12
TAIR|locus:2013021	625	SERK1 "somatic embryogenesis r	0.717	0.166	0.355	5.1e-12
TAIR|locus:2033577	425	AT1G70740 [Arabidopsis thalian	0.875	0.298	0.315	5.3e-12
TAIR|locus:2141862	853	AT4G18250 [Arabidopsis thalian	0.806	0.137	0.365	6.4e-12

TAIR|locus:2026155 AT1G34300 [Arabidopsis thaliana (taxid:3702)]

 Score = 210 (79.0 bits), Expect = 6.7e-16, P = 6.7e-16
 Identities = 53/132 (40%), Positives = 76/132 (57%)

Query:     1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKE-- 58
             ++PEW  +  IT KSDVYS+G+VLLE+V  + NF+V+  T +    S W Y  F      
Sbjct:   652 LAPEWLANLPITSKSDVYSYGMVLLELVSGKRNFDVSEKT-NHKKFSIWAYEEFEKGNTK 710

Query:    59 --LNKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEI--PVVPFP 114
               L+  + ED+ VD+  +  MV+    CIQ++P  RP+M  V+ MLEG  EI  P+ P  
Sbjct:   711 AILDTRLSEDQTVDMEQVMRMVKTSFWCIQEQPLQRPTMGKVVQMLEGITEIKNPLCPKT 770

Query:   115 ILS-NFSSNSQT 125
             I   +FS NS +
Sbjct:   771 ISEVSFSGNSMS 782

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0006487 "protein N-linked glycosylation" evidence=RCA

TAIR|locus:2139845 AT4G28670 [Arabidopsis thaliana (taxid:3702)]

 Score = 186 (70.5 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 46/127 (36%), Positives = 76/127 (59%)

Query:     1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVL--LSTWVYNCFIAKE 58
             M+PE+ + G ++ K D YSFGV++LEI    S F  N   +D  L  L T V+ CF + +
Sbjct:   503 MAPEYISKGRLSNKIDAYSFGVLVLEIT---SGFRNNKFRSDNSLETLVTQVWKCFASNK 559

Query:    59 LNKLVGED--EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVPFPIL 116
             + +++ +D  E+ D + ++ ++++ LLC Q+ P LRP+M  VI M+  T +I V+P P  
Sbjct:   560 MEEMIDKDMGEDTDKQEMKRVMQIGLLCTQESPQLRPTMSKVIQMVSST-DI-VLPTPTK 617

Query:   117 SNFSSNS 123
               F  +S
Sbjct:   618 PPFLHDS 624

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2099941 AT3G55550 [Arabidopsis thaliana (taxid:3702)]

 Score = 184 (69.8 bits), Expect = 3.0e-13, P = 3.0e-13
 Identities = 42/134 (31%), Positives = 76/134 (56%)

Query:     1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
             ++PE   SG +T  +DVY+FG VLLE+ C R   E +    ++V++  WV++ + + ++ 
Sbjct:   515 LAPELTKSGKLTTSTDVYAFGAVLLEVACGRRPIETSALPEELVMVD-WVWSRWQSGDIR 573

Query:    61 KLVGE--DEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIP-VVPFPILS 117
              +V    + E D   +  ++++ LLC  + P +RP+M+ V++ LE     P VVP P   
Sbjct:   574 DVVDRRLNGEFDEEEVVMVIKLGLLCSNNSPEVRPTMRQVVMYLEKQFPSPEVVPAPDFL 633

Query:   118 NFSSNSQTLDGTKG 131
             + +++S  LD   G
Sbjct:   634 D-ANDSMCLDERSG 646

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2084375 AT3G53810 [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 1.0e-12, P = 1.0e-12
 Identities = 43/137 (31%), Positives = 72/137 (52%)

Query:     1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
             ++PE   +G  T  +DVY+FG  LLE+V  R   E + ++ D  LL  WV++ ++    N
Sbjct:   515 LAPEHSRTGRATTTTDVYAFGAFLLEVVSGRRPIEFHSASDDTFLLVEWVFSLWLRG--N 572

Query:    61 KLVGEDEEV-----DLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIP-VVPFP 114
              +  +D ++     DL  +E ++++ LLC   +P  RPSM+ V+  L G M +P + P  
Sbjct:   573 IMEAKDPKLGSSGYDLEEVEMVLKLGLLCSHSDPRARPSMRQVLQYLRGDMALPELTPLD 632

Query:   115 ILSNFSSNSQTLDGTKG 131
             + +    N    DG  G
Sbjct:   633 LSAGSVMNLGGRDGFSG 649

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009555 "pollen development" evidence=IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

TAIR|locus:2059103 AT2G19130 [Arabidopsis thaliana (taxid:3702)]

 Score = 178 (67.7 bits), Expect = 1.8e-12, P = 1.8e-12
 Identities = 41/118 (34%), Positives = 63/118 (53%)

Query:     1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAK-EL 59
             ++PEW +   IT K+DVYS+G++L E+V  R N E +     V    +W         ++
Sbjct:   662 LAPEWISGVAITAKADVYSYGMMLFELVSGRRNTEQS-ENEKVRFFPSWAATILTKDGDI 720

Query:    60 NKLVG---EDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVPFP 114
               LV    E + VD+  +    +V   CIQDE + RP+M  V+ +LEG +E+   PFP
Sbjct:   721 RSLVDPRLEGDAVDIEEVTRACKVACWCIQDEESHRPAMSQVVQILEGVLEVNPPPFP 778

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2168509 AT5G59260 [Arabidopsis thaliana (taxid:3702)]

 Score = 174 (66.3 bits), Expect = 3.5e-12, P = 3.5e-12
 Identities = 43/146 (29%), Positives = 73/146 (50%)

Query:     1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
             M+PE    G+ T  +DVY+FG  +LE+VC R   + +     V+L+  WV +C     L 
Sbjct:   523 MAPELTAMGVTTTCTDVYAFGAFILEVVCGRRPVDPDAPREQVILVK-WVASCGKRDALT 581

Query:    61 KLVGEDEEVDLRTLET--MVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVPFPILS- 117
               V + + +D +  E   ++++ +LC Q  P  RPSM+ ++  LEG + +P + F  ++ 
Sbjct:   582 DTV-DSKLIDFKVEEAKLLLKLGMLCSQINPENRPSMRQILQYLEGNVSVPAISFGTVAL 640

Query:   118 ---NFSSNSQTLDGTKGRDLRFLLEE 140
                N S  + T   T      F  E+
Sbjct:   641 GIPNISHETVTQMTTTSSSANFSFED 666

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2203847 RKF1 "receptor-like kinase in flowers 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 4.9e-12, P = 4.9e-12
 Identities = 44/113 (38%), Positives = 62/113 (54%)

Query:     1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC--CRSNFEVNVSTADVVLLSTWVYNCFIAKE 58
             M+PE+   G +T K+DVYSFGV++LEIV     SNF   +   D V L  +   C  +  
Sbjct:   850 MAPEYALWGYLTFKADVYSFGVLVLEIVAGITNSNF---MGAGDSVCLLEFANECVESGH 906

Query:    59 LNKLVGED--EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIP 109
             L ++V E    EVD +  E +++V L+C    P  RP M  V+ MLEG   +P
Sbjct:   907 LMQVVDERLRPEVDRKEAEAVIKVALVCSSASPTDRPLMSEVVAMLEGLYPVP 959

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0004702 "receptor signaling protein serine/threonine kinase activity" evidence=ISS

TAIR|locus:2013021 SERK1 "somatic embryogenesis receptor-like kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 172 (65.6 bits), Expect = 5.1e-12, P = 5.1e-12
 Identities = 38/107 (35%), Positives = 64/107 (59%)

Query:     1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEV-NVSTADVVLLSTWVYNCFIAKEL 59
             ++PE+ ++G  + K+DV+ +G++LLE++  +  F++  ++  D V+L  WV      K+L
Sbjct:   472 IAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 531

Query:    60 NKLVGEDEEVDL--RTLETMVRVRLLCIQDEPNLRPSMKNVILMLEG 104
               LV  D + +   R LE +++V LLC Q  P  RP M  V+ MLEG
Sbjct:   532 EMLVDPDLQTNYEERELEQVIQVALLCTQGSPMERPKMSEVVRMLEG 578

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0042802 "identical protein binding" evidence=IPI

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=IDA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=TAS

GO:0009556 "microsporogenesis" evidence=IGI;IMP

GO:0010152 "pollen maturation" evidence=IMP

GO:0043234 "protein complex" evidence=IPI

GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IGI;IMP

GO:0033612 "receptor serine/threonine kinase binding" evidence=IPI

GO:0007030 "Golgi organization" evidence=IGI

GO:0010227 "floral organ abscission" evidence=IGI

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

GO:0007062 "sister chromatid cohesion" evidence=RCA

GO:0009880 "embryonic pattern specification" evidence=RCA

GO:0010072 "primary shoot apical meristem specification" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0010431 "seed maturation" evidence=RCA

GO:0016310 "phosphorylation" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0045595 "regulation of cell differentiation" evidence=RCA

GO:0051301 "cell division" evidence=RCA

TAIR|locus:2033577 AT1G70740 [Arabidopsis thaliana (taxid:3702)]

 Score = 169 (64.5 bits), Expect = 5.3e-12, P = 5.3e-12
 Identities = 42/133 (31%), Positives = 73/133 (54%)

Query:     1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
             M+PE+   G+++VK+DV+SFGV++LE+V  + N   ++   D  LL  W +  +      
Sbjct:   230 MAPEYVMHGVLSVKADVFSFGVLVLELVSGQKNSSFSMRHPDQTLLE-WAFKLYKKGRTM 288

Query:    61 KLVGED--EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLE---GTMEIPVVPFPI 115
             +++ +D     D   ++  V++ LLC+Q +P+ RPSM+ V L+L    G +E P  P   
Sbjct:   289 EILDQDIAASADPDQVKLCVQIGLLCVQGDPHQRPSMRRVSLLLSRKPGHLEEPDHPGVP 348

Query:   116 LSNFSSNSQTLDG 128
              S +   +Q   G
Sbjct:   349 GSRYRRRTQRPSG 361

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2141862 AT4G18250 [Arabidopsis thaliana (taxid:3702)]

 Score = 173 (66.0 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 46/126 (36%), Positives = 73/126 (57%)

Query:     1 MSPEW--QNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADV--VLLSTWVYNCFIA 56
             ++PE   +N G ++ KSDVYS+G+V+LE++      EV  S  D   +    WVY     
Sbjct:   688 IAPEMFSKNYGGVSHKSDVYSYGMVVLEMIGATKREEVETSATDKSSMYFPDWVYEDLER 747

Query:    57 KELNKLVGE---DEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGT-ME-IPVV 111
             KE  +L+ +   +EE + + ++ M  V L CIQ  P+ RP M+ V+ MLEG+ +E + V 
Sbjct:   748 KETMRLLEDHIIEEEEEEKIVKRMTLVGLWCIQTNPSDRPPMRKVVEMLEGSRLEALQVP 807

Query:   112 PFPILS 117
             P P+L+
Sbjct:   808 PKPLLN 813

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	145
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	9e-07
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	1e-05
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	5e-05
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	7e-05
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-04
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-04
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-04
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	2e-04
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-04
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	3e-04
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	6e-04
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	6e-04
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	0.001
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	0.001
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	0.002
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	0.002
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	0.002
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	0.002
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	0.003
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	0.004
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	0.004

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 46.8 bits (111), Expect = 9e-07
 Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 8/111 (7%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRS----NFEVNVSTADVVLLSTWVY-NCFI 55
           ++PE + +  IT KSD+Y FG++L+E++  +S     F V+ S   +V  + + Y +C +
Sbjct: 845 VAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGS---IVEWARYCYSDCHL 901

Query: 56  AKELNKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTM 106
              ++  +  D  V+   +  ++ + L C   +P  RP   +V+  LE   
Sbjct: 902 DMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESAS 952

Length = 968

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 14/103 (13%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           M+PE    G+ T KSDV+SFGVVL E+          +S  +V+         F+     
Sbjct: 188 MAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLK--------FVID--G 237

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
             +   E    + LE M     +C Q  P +RP+   ++  L+
Sbjct: 238 GHLDLPENCPDKLLELM----RMCWQYNPKMRPTFLEIVSSLK 276

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 41.3 bits (98), Expect = 5e-05
 Identities = 16/29 (55%), Positives = 19/29 (65%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVC 29
           M+PE    G  T KSDV+SFGV+L EI  
Sbjct: 171 MAPESLKDGKFTSKSDVWSFGVLLWEIFT 199

Length = 258

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 40.8 bits (96), Expect = 7e-05
 Identities = 16/27 (59%), Positives = 21/27 (77%)

Query: 2   SPEWQNSGLITVKSDVYSFGVVLLEIV 28
           +PE  N G  T+KSDV+SFG++L EIV
Sbjct: 172 APEAANYGRFTIKSDVWSFGILLTEIV 198

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 39.8 bits (94), Expect = 2e-04
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 16/104 (15%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKEL 59
           M+PE    G+ T KSDV+SFGV+L EI     + +   +S  +V+    ++   +    L
Sbjct: 174 MAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYP-GLSNEEVL---EYLRKGYR---L 226

Query: 60  NKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
            K     +E+     E M    L C Q +P  RP+   ++  LE
Sbjct: 227 PKPEYCPDEL----YELM----LSCWQLDPEDRPTFSELVERLE 262

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)

Query: 1   MSPE-WQNSGLITVKSDVYSFGVVLLEI 27
           M+PE     G  + KSD++S GV+L E+
Sbjct: 160 MAPEVLLGKGYYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 16/27 (59%), Positives = 19/27 (70%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEI 27
           M+PE    G  T KSDV+SFGV+L EI
Sbjct: 171 MAPESLKEGKFTSKSDVWSFGVLLWEI 197

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 39.6 bits (92), Expect = 2e-04
 Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 16/107 (14%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVV-LLSTWVYNCFIAKEL 59
           M+ E     + T +SDV+SFGV+L EIV    N    ++   +  LL T           
Sbjct: 196 MAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKT----------- 244

Query: 60  NKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTM 106
               G   E      E M  + L C + EP+ RP+  ++   LE  M
Sbjct: 245 ----GYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 16/27 (59%), Positives = 19/27 (70%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEI 27
           M+PE    G  T KSDV+SFGV+L EI
Sbjct: 170 MAPESLKEGKFTSKSDVWSFGVLLWEI 196

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 39.1 bits (91), Expect = 3e-04
 Identities = 16/27 (59%), Positives = 21/27 (77%)

Query: 2   SPEWQNSGLITVKSDVYSFGVVLLEIV 28
           +PE  N G  T+KSDV+SFG++L EIV
Sbjct: 171 APEAINYGTFTIKSDVWSFGILLTEIV 197

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 38.2 bits (89), Expect = 6e-04
 Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 9/97 (9%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYN---CFIAK 57
           MSPE    G  TVKSDV+S G+ ++E+   +  F  +    D       + +     + +
Sbjct: 169 MSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQE 228

Query: 58  ELNKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPS 94
              +L   D   DLR           C+  +P  RP+
Sbjct: 229 PPPRLPSSDFPEDLRDFVD------ACLLKDPTERPT 259

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 38.0 bits (88), Expect = 6e-04
 Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 18/105 (17%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           M+PE    G+ T  SD++SFGVVL EI                  L+   Y     +++ 
Sbjct: 188 MAPESLKDGVFTTSSDMWSFGVVLWEITS----------------LAEQPYQGLSNEQVL 231

Query: 61  KLVGEDEEVDL--RTLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
           K V +   +D      E +  +  +C Q  P +RP+   ++ +L+
Sbjct: 232 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 276

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 37.0 bits (86), Expect = 0.001
 Identities = 13/27 (48%), Positives = 19/27 (70%)

Query: 2   SPEWQNSGLITVKSDVYSFGVVLLEIV 28
           +PE       ++KSDV+SFG++L EIV
Sbjct: 172 APEAALYNRFSIKSDVWSFGILLTEIV 198

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 37.1 bits (86), Expect = 0.001
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 7/43 (16%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVC-------CRSNFEV 36
           M+PE    G  T +SDV+SFGV++ EI+          +N EV
Sbjct: 180 MAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEV 222

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 16/27 (59%), Positives = 21/27 (77%)

Query: 2   SPEWQNSGLITVKSDVYSFGVVLLEIV 28
           +PE  N G  T+KSDV+SFG++L EIV
Sbjct: 172 APEAINFGSFTIKSDVWSFGILLYEIV 198

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 36.7 bits (85), Expect = 0.002
 Identities = 15/27 (55%), Positives = 18/27 (66%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEI 27
           M PE    G  T +SD++SFGVVL EI
Sbjct: 193 MPPEAILYGKFTTESDIWSFGVVLWEI 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 36.4 bits (85), Expect = 0.002
 Identities = 10/35 (28%), Positives = 17/35 (48%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFE 35
           M+PE           D++S GV+L E++  +  F 
Sbjct: 163 MAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFP 197

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 36.5 bits (84), Expect = 0.002
 Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 18/101 (17%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           MSPE    G+ T  SDV+SFGVVL EI                  L+   Y     +++ 
Sbjct: 188 MSPESLKDGVFTTYSDVWSFGVVLWEIAT----------------LAEQPYQGMSNEQVL 231

Query: 61  KLVGEDEEVDL--RTLETMVRVRLLCIQDEPNLRPSMKNVI 99
           + V E   +D      + +  +  +C Q  P +RPS   +I
Sbjct: 232 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 272

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 36.2 bits (83), Expect = 0.003
 Identities = 16/27 (59%), Positives = 22/27 (81%)

Query: 2   SPEWQNSGLITVKSDVYSFGVVLLEIV 28
           +PE  N G  T+KSDV+SFG++L+EIV
Sbjct: 171 APEAINFGSFTIKSDVWSFGILLMEIV 197

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 35.5 bits (82), Expect = 0.004
 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 7/43 (16%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVC-------CRSNFEV 36
           M PE    G+ T K+DV+SFGV+L EI          R+N EV
Sbjct: 188 MPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEV 230

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 35.5 bits (82), Expect = 0.004
 Identities = 15/27 (55%), Positives = 17/27 (62%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEI 27
           M PE       T +SDV+SFGVVL EI
Sbjct: 191 MPPESIMYRKFTTESDVWSFGVVLWEI 217

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	145
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.77
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.75
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.74
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.71
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.68
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.67
PHA02988	283	hypothetical protein; Provisional	99.66
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.66
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.66
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.64
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.61
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.61
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.6
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.6
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.58
KOG0578	550	consensus p21-activated serine/threonine protein k	99.57
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.57
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.57
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.57
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.56
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.56
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.55
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.54
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.53
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.53
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.53
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.52
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.52
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.52
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.52
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.52
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.51
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.51
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.51
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.5
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.5
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.5
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.5
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.5
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.49
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.49
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.49
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.49
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.49
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.49
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.49
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.48
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.48
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.48
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.48
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.48
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.48
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.48
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.48
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.48
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.48
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.48
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.47
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.47
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.47
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.47
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.47
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.47
PTZ00284	467	protein kinase; Provisional	99.46
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.46
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.46
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.46
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.46
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.45
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.45
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.45
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.45
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.45
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.45
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.45
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.45
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.45
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.44
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.44
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.44
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.44
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.44
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.44
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.44
PHA02882	294	putative serine/threonine kinase; Provisional	99.44
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.44
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.44
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.44
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.43
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.43
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.43
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.43
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.43
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.43
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.43
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.43
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.42
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.42
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.42
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.42
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.41
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.41
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.41
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.41
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.41
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.41
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.41
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.41
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.41
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.41
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.41
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.41
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.4
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.4
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.4
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.4
PTZ00283	496	serine/threonine protein kinase; Provisional	99.39
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.39
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.39
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.39
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.39
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.38
KOG0198	313	consensus MEKK and related serine/threonine protei	99.38
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.38
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.38
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.38
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.38
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.38
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.38
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.38
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.38
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.38
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.38
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.37
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.37
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.37
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.37
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.36
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.36
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.36
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.36
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.36
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.36
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.36
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.36
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.36
PTZ00267	478	NIMA-related protein kinase; Provisional	99.36
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.36
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.36
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.35
PHA03212	391	serine/threonine kinase US3; Provisional	99.35
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.35
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.35
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.35
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.35
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.35
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.35
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.34
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.34
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.34
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.34
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.34
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.34
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.33
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.33
PTZ00036	440	glycogen synthase kinase; Provisional	99.33
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.33
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.33
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.33
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.33
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.33
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.33
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.33
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.33
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.33
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.33
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.32
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.32
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.32
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.32
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.32
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.32
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.32
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.32
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.32
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.31
PHA03209	357	serine/threonine kinase US3; Provisional	99.31
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.31
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.31
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.31
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.31
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.31
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.3
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.3
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.3
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.3
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.3
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.3
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.3
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.3
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.3
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.29
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.29
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.29
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.29
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.29
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.29
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.29
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.28
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.28
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.28
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.28
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.28
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.28
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.27
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.27
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.27
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.27
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.27
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.27
PHA03207	392	serine/threonine kinase US3; Provisional	99.27
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.27
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.27
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.27
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.26
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.26
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.26
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.26
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.26
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.26
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.26
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.26
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.26
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.26
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.26
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.26
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.26
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.26
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.26
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.25
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.25
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.25
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.25
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.25
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.25
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.25
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.25
PLN00181	793	protein SPA1-RELATED; Provisional	99.25
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.25
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.25
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.24
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.24
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.24
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.24
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.24
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.24
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.24
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.24
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.24
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.24
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.24
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.23
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.23
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.23
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.23
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.23
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.23
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.23
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.23
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.23
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.23
KOG0589	426	consensus Serine/threonine protein kinase [General	99.23
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.22
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.22
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.22
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.22
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.22
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.22
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.22
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.22
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.22
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.22
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.21
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.21
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.21
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.21
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.21
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.21
PHA03211	461	serine/threonine kinase US3; Provisional	99.21
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.21
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.2
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.2
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.2
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.2
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.2
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.2
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.2
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.19
KOG0605	550	consensus NDR and related serine/threonine kinases	99.19
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.19
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.18
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.18
KOG0610	459	consensus Putative serine/threonine protein kinase	99.18
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.17
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.17
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.17
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.17
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.17
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.17
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.17
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.16
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.15
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.15
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.15
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.15
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.15
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.15
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.15
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.15
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.15
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.14
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.14
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.14
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.13
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.13
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.12
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.12
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.12
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.12
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.11
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.1
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.1
PLN00009	294	cyclin-dependent kinase A; Provisional	99.1
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.1
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.1
KOG0584	632	consensus Serine/threonine protein kinase [General	99.09
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.09
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.09
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.09
PHA03210	501	serine/threonine kinase US3; Provisional	99.08
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.08
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.07
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.06
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.06
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.05
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.05
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.04
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.04
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.03
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.01
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	98.99
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	98.99
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	98.96
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.96
KOG0595	429	consensus Serine/threonine-protein kinase involved	98.94
KOG1290	590	consensus Serine/threonine protein kinase [Signal	98.92
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	98.9
KOG0696	683	consensus Serine/threonine protein kinase [Signal	98.89
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	98.89
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	98.88
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	98.88
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	98.87
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	98.85
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	98.83
KOG0690	516	consensus Serine/threonine protein kinase [Signal	98.82
KOG2052	513	consensus Activin A type IB receptor, serine/threo	98.82
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	98.81
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	98.81
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	98.8
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	98.77
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	98.77
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	98.76
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	98.75
KOG3653	534	consensus Transforming growth factor beta/activin	98.74
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	98.74
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.73
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	98.65
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	98.54
KOG0607	463	consensus MAP kinase-interacting kinase and relate	98.51
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	98.51
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	98.47
KOG0695	593	consensus Serine/threonine protein kinase [Signal	98.45
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.44
KOG0611	668	consensus Predicted serine/threonine protein kinas	98.42
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	98.41
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	98.27
KOG0586	596	consensus Serine/threonine protein kinase [General	98.23
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	98.21
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	98.21
KOG1027	903	consensus Serine/threonine protein kinase and endo	98.19
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	98.16
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	98.16
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	98.1
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	98.08
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	98.07
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	98.04
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.04
KOG0590	601	consensus Checkpoint kinase and related serine/thr	97.92
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	97.9
KOG0576	829	consensus Mitogen-activated protein kinase kinase	97.79
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	97.77
KOG1167	418	consensus Serine/threonine protein kinase of the C	97.72
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	97.67
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	97.64
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	97.53
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	97.48
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	97.36
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	97.32
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	97.13
KOG0606	1205	consensus Microtubule-associated serine/threonine	96.66
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	96.35
KOG1266	458	consensus Protein kinase [Signal transduction mech	96.03
COG0515	384	SPS1 Serine/threonine protein kinase [General func	95.61
KOG0606	1205	consensus Microtubule-associated serine/threonine	94.83
KOG1093	725	consensus Predicted protein kinase (contains TBC a	93.84
KOG2137	700	consensus Protein kinase [Signal transduction mech	91.7
KOG0590	601	consensus Checkpoint kinase and related serine/thr	82.99

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.77  E-value=3.7e-19  Score=130.04  Aligned_cols=95  Identities=28%  Similarity=0.342  Sum_probs=75.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      |+||.+.+++|+++|||||||||+||+++ |+.|+... ...+-+.++..              ...+++|..++..+..
T Consensus       672 MppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~gl-Sn~EVIe~i~~--------------g~lL~~Pe~CP~~vY~  736 (774)
T KOG1026|consen  672 MPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGL-SNQEVIECIRA--------------GQLLSCPENCPTEVYS  736 (774)
T ss_pred             CCHHHhhcCcccchhhhhhhhhhhhhhhccccCccccc-chHHHHHHHHc--------------CCcccCCCCCCHHHHH
Confidence            89999999999999999999999999974 77787754 33332222211              1223678888999999


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEIPV  110 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~~~  110 (145)
                      ||..||+.+|.+||+|++|...|+...+..+
T Consensus       737 LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~  767 (774)
T KOG1026|consen  737 LMLECWNENPKRRPSFKEIHSRLQAWAQASP  767 (774)
T ss_pred             HHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence            9999999999999999999999998766543

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.75  E-value=2.8e-18  Score=118.62  Aligned_cols=93  Identities=29%  Similarity=0.371  Sum_probs=70.4

Q ss_pred             CCCcccc--cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHH
Q 032213            1 MSPEWQN--SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~--~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (145)
                      ||||++.  ...|+.++|||||||++||+++|..||.....  .+  ....+.          .-..++..+..+...+.
T Consensus       211 MAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~--~~--~~~~v~----------~~~~Rp~~p~~~~~~l~  276 (362)
T KOG0192|consen  211 MAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP--VQ--VASAVV----------VGGLRPPIPKECPPHLS  276 (362)
T ss_pred             cChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH--HH--HHHHHH----------hcCCCCCCCccCCHHHH
Confidence            8999999  56899999999999999999999999986522  11  111100          01122233444677899


Q ss_pred             HHHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           79 RVRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      .|+.+||..+|..||++.+++..|+.+..
T Consensus       277 ~l~~~CW~~dp~~RP~f~ei~~~l~~~~~  305 (362)
T KOG0192|consen  277 SLMERCWLVDPSRRPSFLEIVSRLESIMS  305 (362)
T ss_pred             HHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence            99999999999999999999999887654

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.74  E-value=1.6e-18  Score=121.11  Aligned_cols=92  Identities=27%  Similarity=0.376  Sum_probs=71.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      .|||.++.++|+.+||||||||++||++| |+.|+... ...+....++              -.-+++.|..++..+.+
T Consensus       371 tAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~m-sn~ev~~~le--------------~GyRlp~P~~CP~~vY~  435 (468)
T KOG0197|consen  371 TAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGM-SNEEVLELLE--------------RGYRLPRPEGCPDEVYE  435 (468)
T ss_pred             cCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCC-CHHHHHHHHh--------------ccCcCCCCCCCCHHHHH
Confidence            48999999999999999999999999986 45554322 3322222221              12345677788899999


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      +|..||+.+|.+||||..+...|..+..
T Consensus       436 lM~~CW~~~P~~RPtF~~L~~~l~~~~~  463 (468)
T KOG0197|consen  436 LMKSCWHEDPEDRPTFETLREVLEDFFT  463 (468)
T ss_pred             HHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence            9999999999999999999888887654

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.71  E-value=3.5e-17  Score=113.58  Aligned_cols=107  Identities=31%  Similarity=0.575  Sum_probs=88.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcch---hhcH-HHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDE---EVDL-RTLET   76 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~   76 (145)
                      +||||+..+..+.++|||||||++.|+++|+.+..... ......+..|.........+..++|+++   ..+. .....
T Consensus       245 ~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~-~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~  323 (361)
T KOG1187|consen  245 LAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSR-PRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKK  323 (361)
T ss_pred             CChhhhccCCcCcccccccchHHHHHHHhCCcccCCCC-CcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHH
Confidence            58999998999999999999999999999998877542 2334447888877777778888999885   3333 56778


Q ss_pred             HHHHHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           77 MVRVRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        77 ~~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      +..++.+|++.+|..||+|.+|+..|+.+...
T Consensus       324 ~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~  355 (361)
T KOG1187|consen  324 LAELALRCLRPDPKERPTMSQVVKELEGILSL  355 (361)
T ss_pred             HHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence            99999999999999999999999999765544

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.68  E-value=1.9e-16  Score=99.86  Aligned_cols=97  Identities=16%  Similarity=0.217  Sum_probs=64.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHH--HHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLE--TMV   78 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~   78 (145)
                      ||||++.+..++.++||||||++++|+++|..|+.........  +....      .............+.....  .+.
T Consensus        71 ~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~--~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~  142 (176)
T smart00750       71 MAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAI--LEILL------NGMPADDPRDRSNLESVSAARSFA  142 (176)
T ss_pred             cChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHH--HHHHH------HHhccCCccccccHHHHHhhhhHH
Confidence            6999999889999999999999999999999998643111111  00000      0000000000011222222  589


Q ss_pred             HHHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           79 RVRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      +++.+||..+|.+||++.+++..+..+
T Consensus       143 ~~i~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      143 DFMRVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHHHHHHhcccccccCHHHHHHHHHHH
Confidence            999999999999999999999877644

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.67  E-value=3.8e-17  Score=123.18  Aligned_cols=92  Identities=30%  Similarity=0.458  Sum_probs=70.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||.+..+.|+.|+|||||||++||+++ |..||-.. ...+.....              ..+-+++.|..++..+.+
T Consensus       871 m~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~-~n~~v~~~~--------------~~ggRL~~P~~CP~~ly~  935 (1025)
T KOG1095|consen  871 MPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSR-SNFEVLLDV--------------LEGGRLDPPSYCPEKLYQ  935 (1025)
T ss_pred             CCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCc-chHHHHHHH--------------HhCCccCCCCCCChHHHH
Confidence            89999999999999999999999999987 55566533 221111111              112244567778888999


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      +|..||+.+|++||+|..++.++..+..
T Consensus       936 lM~~CW~~~pe~RP~F~~i~~q~~~i~~  963 (1025)
T KOG1095|consen  936 LMLQCWKHDPEDRPSFRTIVEQDPAISN  963 (1025)
T ss_pred             HHHHHccCChhhCccHHHHHhhhhhhhh
Confidence            9999999999999999999998877654

>PHA02988 hypothetical protein; Provisional

Probab=99.66  E-value=1.1e-16  Score=108.18  Aligned_cols=93  Identities=25%  Similarity=0.297  Sum_probs=66.7

Q ss_pred             CCCccccc--CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHH
Q 032213            1 MSPEWQNS--GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~--~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (145)
                      +|||++.+  ..++.++|+||||+++||+++|..||.... ..   .+.....    ..      ......+...+..+.
T Consensus       187 ~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~-~~---~~~~~i~----~~------~~~~~~~~~~~~~l~  252 (283)
T PHA02988        187 FSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLT-TK---EIYDLII----NK------NNSLKLPLDCPLEIK  252 (283)
T ss_pred             cCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCC-HH---HHHHHHH----hc------CCCCCCCCcCcHHHH
Confidence            58998865  678999999999999999999999987431 11   1111000    00      011122333466789


Q ss_pred             HHHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           79 RVRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      +++.+||+.+|.+||++.+++..|+.+..
T Consensus       253 ~li~~cl~~dp~~Rps~~ell~~l~~~~~  281 (283)
T PHA02988        253 CIVEACTSHDSIKRPNIKEILYNLSLYKF  281 (283)
T ss_pred             HHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence            99999999999999999999999987643

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.66  E-value=4.3e-17  Score=115.94  Aligned_cols=90  Identities=26%  Similarity=0.377  Sum_probs=70.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||+++....++|+||||||||+|||+||..||....+....     |+...   +      .-.++.|..++..+.-|
T Consensus       278 MAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAII-----wGVGs---N------sL~LpvPstcP~GfklL  343 (904)
T KOG4721|consen  278 MAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAII-----WGVGS---N------SLHLPVPSTCPDGFKLL  343 (904)
T ss_pred             hCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeE-----EeccC---C------cccccCcccCchHHHHH
Confidence            8999999999999999999999999999999999854221111     11110   0      11235677788889999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhc
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEG  104 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~  104 (145)
                      +..||.-+|..||+|.+++..|.-
T Consensus       344 ~Kqcw~sKpRNRPSFrqil~HldI  367 (904)
T KOG4721|consen  344 LKQCWNSKPRNRPSFRQILLHLDI  367 (904)
T ss_pred             HHHHHhcCCCCCccHHHHHHHHhh
Confidence            999999999999999999988774

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.66  E-value=5.3e-16  Score=119.71  Aligned_cols=105  Identities=24%  Similarity=0.476  Sum_probs=75.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcch----hhcHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDE----EVDLRTLET   76 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~   76 (145)
                      ||||++.+..++.++|||||||++||+++|+.|+....  .....+..|.............+++..    ..+......
T Consensus       845 ~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  922 (968)
T PLN00113        845 VAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEF--GVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVE  922 (968)
T ss_pred             cCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCccc--CCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHH
Confidence            68999998889999999999999999999999985431  112233344332222222222333322    234455667


Q ss_pred             HHHHHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           77 MVRVRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        77 ~~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      +.+++.+||+.+|.+||++.+|++.|+.+..
T Consensus       923 ~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        923 VMNLALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             HHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence            8899999999999999999999999998765

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.64  E-value=2.8e-17  Score=119.89  Aligned_cols=97  Identities=23%  Similarity=0.310  Sum_probs=76.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHH-hCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIV-CCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      .|||.+...+|+.++||||||||+||++ +|.+||=.. +.++-+.-++              -+-+++.|.+++..+..
T Consensus       801 TAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdm-SNQdVIkaIe--------------~gyRLPpPmDCP~aL~q  865 (996)
T KOG0196|consen  801 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM-SNQDVIKAIE--------------QGYRLPPPMDCPAALYQ  865 (996)
T ss_pred             cChhHhhhcccCchhhccccceEEEEecccCCCccccc-chHHHHHHHH--------------hccCCCCCCCCcHHHHH
Confidence            4899999999999999999999999965 788887533 2222221111              12344667888999999


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCCCCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVP  112 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~~~~~  112 (145)
                      ||+.||+++...||.|.+++..|.++...+...
T Consensus       866 LMldCWqkdR~~RP~F~qiV~~lDklIrnP~SL  898 (996)
T KOG0196|consen  866 LMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSL  898 (996)
T ss_pred             HHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhh
Confidence            999999999999999999999999988766444

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.61  E-value=4.1e-16  Score=106.66  Aligned_cols=91  Identities=22%  Similarity=0.267  Sum_probs=70.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      |++|.+....|+.++|+|+||+++||+++ |+.|+... ++.+..++...              +.++..|.+++.++..
T Consensus       465 MslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeI-DPfEm~~ylkd--------------GyRlaQP~NCPDeLf~  529 (563)
T KOG1024|consen  465 MSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEI-DPFEMEHYLKD--------------GYRLAQPFNCPDELFT  529 (563)
T ss_pred             cCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCcccc-CHHHHHHHHhc--------------cceecCCCCCcHHHHH
Confidence            67888888889999999999999999875 77787654 22222222211              2234567778889999


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      +|.+||...|++||++.++...|.++.
T Consensus       530 vMacCWallpeeRPsf~Qlv~cLseF~  556 (563)
T KOG1024|consen  530 VMACCWALLPEERPSFSQLVICLSEFH  556 (563)
T ss_pred             HHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence            999999999999999999999887653

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.61  E-value=9.2e-16  Score=103.60  Aligned_cols=88  Identities=26%  Similarity=0.374  Sum_probs=67.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCC-CCchhhHhHHHHHHHHHHHhHhhhhhC-cchhhcHH-HHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVN-VSTADVVLLSTWVYNCFIAKELNKLVG-EDEEVDLR-TLETM   77 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~   77 (145)
                      ||||.+.+..|+.++||||||+.++|+..|+.|+... ........+..            .+++ +.+..|.. ...++
T Consensus       244 MsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~------------~Iv~~ppP~lP~~~fS~ef  311 (364)
T KOG0581|consen  244 MSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLC------------AIVDEPPPRLPEGEFSPEF  311 (364)
T ss_pred             cChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHH------------HHhcCCCCCCCcccCCHHH
Confidence            8999999999999999999999999999999998653 11112222221            2333 22334444 78889


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHH
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ..|+.+|+++||.+||++.+++.
T Consensus       312 ~~FV~~CL~Kdp~~R~s~~qLl~  334 (364)
T KOG0581|consen  312 RSFVSCCLRKDPSERPSAKQLLQ  334 (364)
T ss_pred             HHHHHHHhcCCcccCCCHHHHhc
Confidence            99999999999999999999976

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.60  E-value=1.7e-15  Score=101.99  Aligned_cols=90  Identities=23%  Similarity=0.268  Sum_probs=66.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++....++.++|+||||++++|+++ |..|+..... .   .....         +.  .......+...+..+.+
T Consensus       193 ~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~-~---~~~~~---------i~--~~~~~~~~~~~~~~~~~  257 (283)
T cd05048         193 MPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN-Q---EVIEM---------IR--SRQLLPCPEDCPARVYA  257 (283)
T ss_pred             cCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH-H---HHHHH---------HH--cCCcCCCcccCCHHHHH
Confidence            68998888889999999999999999997 8888764311 1   11110         00  01111233445677999


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      |+.+||..+|.+||++.+|+..|+++
T Consensus       258 l~~~c~~~~p~~Rp~~~~i~~~l~~~  283 (283)
T cd05048         258 LMIECWNEIPARRPRFKDIHTRLRSW  283 (283)
T ss_pred             HHHHHccCChhhCcCHHHHHHHHhcC
Confidence            99999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.60  E-value=1.6e-15  Score=104.74  Aligned_cols=93  Identities=26%  Similarity=0.412  Sum_probs=66.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++.+..++.++|+||||++++|+++ |..|+........   +...    ...       ......+...+..+.+
T Consensus       243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~---~~~~----~~~-------~~~~~~~~~~~~~l~~  308 (338)
T cd05102         243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE---FCQR----LKD-------GTRMRAPENATPEIYR  308 (338)
T ss_pred             cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH---HHHH----Hhc-------CCCCCCCCCCCHHHHH
Confidence            58999988889999999999999999996 8888764311111   1000    000       0011112233556899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++.+||..+|.+||++.++++.|+.+..
T Consensus       309 li~~cl~~dp~~RPs~~el~~~l~~~~~  336 (338)
T cd05102         309 IMLACWQGDPKERPTFSALVEILGDLLQ  336 (338)
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            9999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.58  E-value=6.2e-16  Score=111.11  Aligned_cols=92  Identities=24%  Similarity=0.309  Sum_probs=73.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHH-hCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIV-CCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||.++..+|+.++|||-|||++||++ .|..||..........++               --+.+++.|+.++..+..
T Consensus       559 maPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~i---------------EnGeRlP~P~nCPp~LYs  623 (974)
T KOG4257|consen  559 MAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHI---------------ENGERLPCPPNCPPALYS  623 (974)
T ss_pred             cCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEe---------------cCCCCCCCCCCCChHHHH
Confidence            7999999999999999999999999975 688898754111110000               124456788899999999


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      |+.+||..+|.+||.++++...|+.+.+
T Consensus       624 lmskcWayeP~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  624 LMSKCWAYEPSKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             HHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence            9999999999999999999988877654

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.57  E-value=1e-15  Score=108.07  Aligned_cols=87  Identities=17%  Similarity=0.185  Sum_probs=68.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++....|..+.||||+|++.+||+.|.+||....+......+...             -.+++..+......+.+|
T Consensus       436 MAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~n-------------g~P~lk~~~klS~~~kdF  502 (550)
T KOG0578|consen  436 MAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-------------GTPKLKNPEKLSPELKDF  502 (550)
T ss_pred             cchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhc-------------CCCCcCCccccCHHHHHH
Confidence            8999999999999999999999999999999999854333333322211             112234455667889999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..|+.+|+++.++|+
T Consensus       503 L~~cL~~dv~~RasA~eLL~  522 (550)
T KOG0578|consen  503 LDRCLVVDVEQRASAKELLE  522 (550)
T ss_pred             HHHHhhcchhcCCCHHHHhc
Confidence            99999999999999999986

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.57  E-value=4e-15  Score=107.27  Aligned_cols=92  Identities=24%  Similarity=0.276  Sum_probs=68.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhC-CCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCC-RSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      .|||-+.++.|+.++|||+|||++||+.+. -.||... .......+.+              -+-++..|..|+..+.+
T Consensus       433 TAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi-dlSqVY~LLE--------------kgyRM~~PeGCPpkVYe  497 (1157)
T KOG4278|consen  433 TAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYGLLE--------------KGYRMDGPEGCPPKVYE  497 (1157)
T ss_pred             cCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc-cHHHHHHHHh--------------ccccccCCCCCCHHHHH
Confidence            489999999999999999999999999764 4455432 1111111111              12234456667788999


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ||+.||..+|.+||+|.++.+.++.+..
T Consensus       498 LMraCW~WsPsDRPsFaeiHqafEtmf~  525 (1157)
T KOG4278|consen  498 LMRACWNWSPSDRPSFAEIHQAFETMFS  525 (1157)
T ss_pred             HHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence            9999999999999999999998876643

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.57  E-value=4.4e-15  Score=109.50  Aligned_cols=91  Identities=25%  Similarity=0.388  Sum_probs=67.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||.+....|+.++|||||||++||+++ |..|+........   +..+.           --+.++..|..+..++..
T Consensus       488 mApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~---l~~~l-----------~~G~r~~~P~~c~~eiY~  553 (609)
T KOG0200|consen  488 MAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEE---LLEFL-----------KEGNRMEQPEHCSDEIYD  553 (609)
T ss_pred             cCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHH---HHHHH-----------hcCCCCCCCCCCCHHHHH
Confidence            79999999999999999999999999986 5556643100111   11110           012234556667888999


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      +|..||+.+|++||+++++...+...
T Consensus       554 iM~~CW~~~p~~RP~F~~~~~~~~~~  579 (609)
T KOG0200|consen  554 LMKSCWNADPEDRPTFSECVEFFEKH  579 (609)
T ss_pred             HHHHHhCCCcccCCCHHHHHHHHHHH
Confidence            99999999999999999999988874

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.57  E-value=1.9e-15  Score=104.16  Aligned_cols=85  Identities=20%  Similarity=0.309  Sum_probs=65.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..|+.++|+||+||..+||.+|.+|+....+.+....+.             +-.++.  ........+.+|
T Consensus       178 MAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIp-------------k~~PP~--L~~~~S~~~kEF  242 (467)
T KOG0201|consen  178 MAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIP-------------KSAPPR--LDGDFSPPFKEF  242 (467)
T ss_pred             cchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEecc-------------CCCCCc--cccccCHHHHHH
Confidence            89999998899999999999999999999999988664433222111             001111  122457779999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +..|+..+|..||++.+++.
T Consensus       243 V~~CL~k~P~~RpsA~~LLK  262 (467)
T KOG0201|consen  243 VEACLDKNPEFRPSAKELLK  262 (467)
T ss_pred             HHHHhhcCcccCcCHHHHhh
Confidence            99999999999999999985

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.56  E-value=3e-15  Score=106.79  Aligned_cols=94  Identities=21%  Similarity=0.355  Sum_probs=69.6

Q ss_pred             CCCcccc---cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHh-HHHHHHHHHHHhHhhhhhCcch-hhcHHHHH
Q 032213            1 MSPEWQN---SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVL-LSTWVYNCFIAKELNKLVGEDE-EVDLRTLE   75 (145)
Q Consensus         1 ~aPe~~~---~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   75 (145)
                      ||||+++   ...|+..+|||+||+|+|||++|..||...  ..+++. +++.+           .+.+++ ..--.+++
T Consensus       557 mAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~--~~dqIifmVGrG-----------~l~pd~s~~~s~~pk  623 (678)
T KOG0193|consen  557 MAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQ--NRDQIIFMVGRG-----------YLMPDLSKIRSNCPK  623 (678)
T ss_pred             hcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCC--ChhheEEEeccc-----------ccCccchhhhccCHH
Confidence            7999997   456999999999999999999999999833  333222 11110           111111 22234577


Q ss_pred             HHHHHHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           76 TMVRVRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        76 ~~~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++.+|+..||..++++||.+.+|+..|+.+..
T Consensus       624 ~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~  655 (678)
T KOG0193|consen  624 AMKRLLSDCWKFDREERPLFPQLLSKLEELLP  655 (678)
T ss_pred             HHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence            89999999999999999999999998887665

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.56  E-value=1.4e-15  Score=101.50  Aligned_cols=87  Identities=26%  Similarity=0.413  Sum_probs=58.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++||||||++++|+++ |..|+... ..   ..+....         .  -......+...+..+.+
T Consensus       172 ~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~-~~---~~~~~~~---------~--~~~~~~~~~~~~~~~~~  236 (259)
T PF07714_consen  172 LAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY-DN---EEIIEKL---------K--QGQRLPIPDNCPKDIYS  236 (259)
T ss_dssp             S-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS-CH---HHHHHHH---------H--TTEETTSBTTSBHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccc-cc---ccccccc---------c--ccccceeccchhHHHHH
Confidence            57899888889999999999999999999 56776543 11   1111110         0  00111223334566889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHh
Q 032213           80 VRLLCIQDEPNLRPSMKNVILML  102 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L  102 (145)
                      ++.+||..+|.+||++.++++.|
T Consensus       237 li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  237 LIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHHT-SSGGGS--HHHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHhcC
Confidence            99999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.55  E-value=3.6e-15  Score=100.50  Aligned_cols=104  Identities=17%  Similarity=0.203  Sum_probs=67.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCc--chhhcHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGE--DEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~   78 (145)
                      ++||++....++.++|+||||++++|+++|..|+.....  ....+............+......  ..+.+...+..+.
T Consensus       177 ~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (283)
T cd05080         177 YAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPK--KFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVY  254 (283)
T ss_pred             eCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcc--hhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHH
Confidence            478888777888999999999999999999988753311  111111110000000011111111  1122333456799


Q ss_pred             HHHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           79 RVRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      +++.+||+.+|.+||++.+++..|+.+.
T Consensus       255 ~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         255 ILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             HHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence            9999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.54  E-value=1.2e-14  Score=98.40  Aligned_cols=93  Identities=25%  Similarity=0.288  Sum_probs=66.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++|+++ |..|+.... ...   .....    ...       .....+...+..+.+
T Consensus       192 ~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~-~~~---~~~~~----~~~-------~~~~~~~~~~~~~~~  256 (291)
T cd05094         192 MPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS-NTE---VIECI----TQG-------RVLERPRVCPKEVYD  256 (291)
T ss_pred             cChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-HHH---HHHHH----hCC-------CCCCCCccCCHHHHH
Confidence            58998888888999999999999999998 888875431 111   11100    000       000112223556899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      ++.+||+.+|.+||++.+|++.|+.+...
T Consensus       257 li~~~l~~~P~~Rpt~~~v~~~l~~~~~~  285 (291)
T cd05094         257 IMLGCWQREPQQRLNIKEIYKILHALGKA  285 (291)
T ss_pred             HHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence            99999999999999999999999988653

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.53  E-value=1.3e-14  Score=97.56  Aligned_cols=88  Identities=27%  Similarity=0.411  Sum_probs=62.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++|+++ |..||... ..........        .      ......+...+..+.+
T Consensus       188 ~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~-~~~~~~~~~~--------~------~~~~~~~~~~~~~~~~  252 (277)
T cd05036         188 MPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGR-TNQEVMEFVT--------G------GGRLDPPKGCPGPVYR  252 (277)
T ss_pred             CCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHH--------c------CCcCCCCCCCCHHHHH
Confidence            57999888889999999999999999996 88787643 1111111000        0      0111122333567889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhh
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLE  103 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~  103 (145)
                      ++.+||+.+|++||++.+|++.|+
T Consensus       253 ~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         253 IMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             HHHHHcCCCcccCcCHHHHHHHhh
Confidence            999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.53  E-value=1.9e-14  Score=96.73  Aligned_cols=89  Identities=24%  Similarity=0.284  Sum_probs=63.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+|++++|+++ |..|+.... ...   ......    ..    ..   ...+...+..+.+
T Consensus       191 ~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~-~~~---~~~~~~----~~----~~---~~~~~~~~~~~~~  255 (280)
T cd05049         191 MPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLS-NEE---VIECIT----QG----RL---LQRPRTCPSEVYD  255 (280)
T ss_pred             cChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCC-HHH---HHHHHH----cC----Cc---CCCCCCCCHHHHH
Confidence            58999988889999999999999999998 888875431 111   111100    00    00   0112234567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEG  104 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~  104 (145)
                      ++.+||..+|.+||++.++++.|++
T Consensus       256 li~~~l~~~p~~Rp~~~eil~~l~~  280 (280)
T cd05049         256 IMLGCWKRDPQQRINIKDIHERLQK  280 (280)
T ss_pred             HHHHHcCCCcccCCCHHHHHHHhhC
Confidence            9999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.53  E-value=1.6e-14  Score=96.26  Aligned_cols=91  Identities=23%  Similarity=0.388  Sum_probs=62.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCC-CCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRS-NFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++|+++|.. |+... ..   ..+....   .        -......+...+..+.+
T Consensus       169 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~-~~---~~~~~~~---~--------~~~~~~~~~~~~~~~~~  233 (262)
T cd05058         169 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-DS---FDITVYL---L--------QGRRLLQPEYCPDPLYE  233 (262)
T ss_pred             cChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC-CH---HHHHHHH---h--------cCCCCCCCCcCCHHHHH
Confidence            57898877788999999999999999999654 44322 11   1111110   0        00011112223456889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      ++.+||..+|.+||++.+++..|+.+.
T Consensus       234 li~~cl~~~p~~Rp~~~~il~~l~~~~  260 (262)
T cd05058         234 VMLSCWHPKPEMRPTFSELVSRIEQIF  260 (262)
T ss_pred             HHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence            999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.52  E-value=1.9e-14  Score=95.69  Aligned_cols=91  Identities=22%  Similarity=0.260  Sum_probs=65.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||+..+..++.++|+||||++++++++ |..|+.... ..   .+......      .     .....+...+..+.+
T Consensus       165 ~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~-~~---~~~~~~~~------~-----~~~~~~~~~~~~l~~  229 (257)
T cd05060         165 YAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK-GA---EVIAMLES------G-----ERLPRPEECPQEIYS  229 (257)
T ss_pred             cCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCC-HH---HHHHHHHc------C-----CcCCCCCCCCHHHHH
Confidence            47898888888999999999999999997 888876431 11   11111100      0     011223334567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      ++.+||..+|.+||++.+++..|+.+.
T Consensus       230 li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         230 IMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             HHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence            999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.52  E-value=2.5e-14  Score=95.76  Aligned_cols=90  Identities=21%  Similarity=0.340  Sum_probs=64.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||++.+..++.++|+||||++++|+++ |..|+... ...   .......           -......+......+.+
T Consensus       182 ~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~-~~~---~~~~~~~-----------~~~~~~~~~~~~~~~~~  246 (273)
T cd05035         182 IAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGV-ENH---EIYDYLR-----------HGNRLKQPEDCLDELYD  246 (273)
T ss_pred             cCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCC-CHH---HHHHHHH-----------cCCCCCCCcCCCHHHHH
Confidence            47888877788999999999999999998 77777543 111   1111100           00111223344667899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      ++.+||..+|.+||++.+++..|+.+
T Consensus       247 li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         247 LMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            99999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.52  E-value=1.4e-14  Score=101.46  Aligned_cols=92  Identities=21%  Similarity=0.339  Sum_probs=65.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++....++.++|+||||++++++++ |..||..............        ..    .  ....+...+..+.+
T Consensus       281 ~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~--------~~----~--~~~~~~~~~~~l~~  346 (374)
T cd05106         281 MAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVK--------RG----Y--QMSRPDFAPPEIYS  346 (374)
T ss_pred             eCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHH--------cc----c--CccCCCCCCHHHHH
Confidence            58998888889999999999999999997 8888864311111100000        00    0  00111122457899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      ++.+||+.+|.+||++.+|++.|+++.
T Consensus       347 li~~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         347 IMKMCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence            999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.52  E-value=2.3e-14  Score=99.09  Aligned_cols=93  Identities=24%  Similarity=0.354  Sum_probs=65.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+||+++|+++ |..|+........   +...         +...  .....+......+.+
T Consensus       242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~---~~~~---------~~~~--~~~~~~~~~~~~~~~  307 (337)
T cd05054         242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE---FCRR---------LKEG--TRMRAPEYATPEIYS  307 (337)
T ss_pred             cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH---HHHH---------Hhcc--CCCCCCccCCHHHHH
Confidence            58999988889999999999999999997 8888764311111   1000         0000  001112233456899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++.+||+.+|++||++.+++..|+.+.+
T Consensus       308 l~~~cl~~~p~~RPs~~ell~~l~~~~~  335 (337)
T cd05054         308 IMLDCWHNNPEDRPTFSELVEILGDLLQ  335 (337)
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            9999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.52  E-value=2.5e-14  Score=100.25  Aligned_cols=90  Identities=22%  Similarity=0.328  Sum_probs=63.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++|+++ |..|+........   +.....     ...      ....+...+..+.+
T Consensus       283 ~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~---~~~~~~-----~~~------~~~~~~~~~~~l~~  348 (375)
T cd05104         283 MAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSK---FYKMIK-----EGY------RMLSPECAPSEMYD  348 (375)
T ss_pred             eChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHH---HHHHHH-----hCc------cCCCCCCCCHHHHH
Confidence            58999988889999999999999999997 7777754311111   111100     000      00111223456899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEG  104 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~  104 (145)
                      |+.+||..+|.+||++.+|++.|++
T Consensus       349 li~~cl~~dP~~RPs~~eil~~l~~  373 (375)
T cd05104         349 IMKSCWDADPLKRPTFKQIVQLIEQ  373 (375)
T ss_pred             HHHHHccCChhHCcCHHHHHHHHHh
Confidence            9999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.51  E-value=2.7e-14  Score=95.30  Aligned_cols=90  Identities=26%  Similarity=0.268  Sum_probs=64.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+|+||++++|+++ |..|+... ..   ......         +....  ....+...+..+.+
T Consensus       172 ~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~-~~---~~~~~~---------~~~~~--~~~~~~~~~~~~~~  236 (263)
T cd05052         172 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DL---SQVYEL---------LEKGY--RMERPEGCPPKVYE  236 (263)
T ss_pred             CCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC-CH---HHHHHH---------HHCCC--CCCCCCCCCHHHHH
Confidence            57898888888999999999999999998 77777533 11   111100         00000  11122334567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      ++.+||..+|.+||++.++++.|+.+
T Consensus       237 li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         237 LMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             HHHHHccCCcccCCCHHHHHHHHHhh
Confidence            99999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.51  E-value=2.3e-14  Score=95.89  Aligned_cols=90  Identities=21%  Similarity=0.214  Sum_probs=64.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++|+++ |..|+... ...   ......         ...  ...+.+...+..+.+
T Consensus       175 ~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~-~~~---~~~~~~---------~~~--~~~~~~~~~~~~~~~  239 (266)
T cd05064         175 AAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDM-SGQ---DVIKAV---------EDG--FRLPAPRNCPNLLHQ  239 (266)
T ss_pred             cCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcC-CHH---HHHHHH---------HCC--CCCCCCCCCCHHHHH
Confidence            58998888889999999999999999774 88888643 111   111110         000  011223344567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      ++.+||+.+|.+||++.++...|+.+
T Consensus       240 li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         240 LMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             HHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            99999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.51  E-value=2.9e-14  Score=94.87  Aligned_cols=90  Identities=28%  Similarity=0.344  Sum_probs=64.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++....++.++|+||||++++|+++ |..|+... .........            ..  ......+...+..+.+
T Consensus       165 ~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~-~~~~~~~~i------------~~--~~~~~~~~~~~~~l~~  229 (257)
T cd05116         165 YAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGM-KGNEVTQMI------------ES--GERMECPQRCPPEMYD  229 (257)
T ss_pred             cCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHH------------HC--CCCCCCCCCCCHHHHH
Confidence            57888877778889999999999999997 88888643 111111110            00  0011223334567889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      ++.+||..+|.+||++.+|...|...
T Consensus       230 li~~~~~~~p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         230 LMKLCWTYGVDERPGFAVVELRLRNY  255 (257)
T ss_pred             HHHHHhccCchhCcCHHHHHHHHhcc
Confidence            99999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.50  E-value=3.1e-14  Score=97.55  Aligned_cols=94  Identities=20%  Similarity=0.301  Sum_probs=66.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++....++.++|+||||+++||+++ |..|+... ....   +...         +.  .....+.+..+...+.+
T Consensus       178 ~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~-~~~~---~~~~---------~~--~~~~~~~~~~~~~~~~~  242 (316)
T cd05108         178 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE---ISSI---------LE--KGERLPQPPICTIDVYM  242 (316)
T ss_pred             cChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-CHHH---HHHH---------Hh--CCCCCCCCCCCCHHHHH
Confidence            57898888888999999999999999987 88887643 1111   1100         00  00111122233456889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEIP  109 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~~  109 (145)
                      ++..||..+|.+||++.+++..|..+...+
T Consensus       243 li~~cl~~~p~~Rps~~~l~~~l~~~~~~~  272 (316)
T cd05108         243 IMVKCWMIDADSRPKFRELIIEFSKMARDP  272 (316)
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence            999999999999999999999988776544

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.50  E-value=3.2e-14  Score=95.83  Aligned_cols=93  Identities=22%  Similarity=0.183  Sum_probs=65.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||++.++.++.++|+||||++++|+++ |..|+.... ......+..       ..       .....+..+...+..
T Consensus       178 ~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~-~~~~~~~~~-------~~-------~~~~~~~~~~~~~~~  242 (279)
T cd05111         178 MALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMR-PHEVPDLLE-------KG-------ERLAQPQICTIDVYM  242 (279)
T ss_pred             cCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHH-------CC-------CcCCCCCCCCHHHHH
Confidence            57898888889999999999999999997 888876431 111111100       00       000111122345788


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      ++.+||..+|.+||++.+++..|..+...
T Consensus       243 li~~c~~~~p~~Rps~~el~~~l~~~~~~  271 (279)
T cd05111         243 VMVKCWMIDENVRPTFKELANEFTRMARD  271 (279)
T ss_pred             HHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence            99999999999999999999998876653

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.50  E-value=2.2e-14  Score=96.96  Aligned_cols=93  Identities=24%  Similarity=0.292  Sum_probs=65.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++++++ |..|+.... ..   ......    ....   .    ...+...+..+.+
T Consensus       189 ~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~-~~---~~~~~i----~~~~---~----~~~~~~~~~~l~~  253 (288)
T cd05093         189 MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS-NN---EVIECI----TQGR---V----LQRPRTCPKEVYD  253 (288)
T ss_pred             cCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-HH---HHHHHH----HcCC---c----CCCCCCCCHHHHH
Confidence            58998888888999999999999999998 777775331 11   111100    0000   0    0111123456899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      ++.+||+.+|.+||++.+++..|+.+...
T Consensus       254 li~~~l~~~p~~Rpt~~~v~~~l~~~~~~  282 (288)
T cd05093         254 LMLGCWQREPHMRLNIKEIHSLLQNLAKA  282 (288)
T ss_pred             HHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence            99999999999999999999999887654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.50  E-value=3.9e-14  Score=94.72  Aligned_cols=90  Identities=20%  Similarity=0.267  Sum_probs=63.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||++....++.++|+||||++++|+++ |..|+.... .   ..+...         +...  ...+.+...+..+.+
T Consensus       177 ~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~-~---~~~~~~---------i~~~--~~~~~~~~~~~~~~~  241 (268)
T cd05063         177 TAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS-N---HEVMKA---------INDG--FRLPAPMDCPSAVYQ  241 (268)
T ss_pred             cCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC-H---HHHHHH---------HhcC--CCCCCCCCCCHHHHH
Confidence            57888877788999999999999999987 888875431 1   111110         0000  011122233567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      ++.+||..+|.+||++.+|+..|.++
T Consensus       242 li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         242 LMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             HHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            99999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.50  E-value=4.6e-14  Score=93.81  Aligned_cols=88  Identities=24%  Similarity=0.323  Sum_probs=61.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++++++ |..|+.....    .........           ......+......+.+
T Consensus       168 ~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~----~~~~~~i~~-----------~~~~~~~~~~~~~~~~  232 (256)
T cd05114         168 SPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN----YEVVEMISR-----------GFRLYRPKLASMTVYE  232 (256)
T ss_pred             CChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH----HHHHHHHHC-----------CCCCCCCCCCCHHHHH
Confidence            57999887788999999999999999999 7888764311    111111000           0001111122456899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhh
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLE  103 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~  103 (145)
                      ++.+||..+|++||++.+++..|.
T Consensus       233 li~~c~~~~p~~Rps~~~l~~~l~  256 (256)
T cd05114         233 VMYSCWHEKPEGRPTFAELLRAIT  256 (256)
T ss_pred             HHHHHccCCcccCcCHHHHHHhhC
Confidence            999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.49  E-value=3.8e-14  Score=95.48  Aligned_cols=88  Identities=24%  Similarity=0.283  Sum_probs=63.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCc-chhhcHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGE-DEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   78 (145)
                      +|||++.++.++.++|+||+|++++|+++ |..|+... ...   .....            +... ....+...+..+.
T Consensus       193 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~-~~~---~~~~~------------i~~~~~~~~~~~~~~~~~  256 (283)
T cd05091         193 MSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY-SNQ---DVIEM------------IRNRQVLPCPDDCPAWVY  256 (283)
T ss_pred             cCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC-CHH---HHHHH------------HHcCCcCCCCCCCCHHHH
Confidence            58998887888999999999999999997 66676543 111   11110            1111 1122334456689


Q ss_pred             HHHHhcccCCCCCCCCHHHHHHHhhc
Q 032213           79 RVRLLCIQDEPNLRPSMKNVILMLEG  104 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~~L~~  104 (145)
                      +++..||+.+|.+||++.+++..|+.
T Consensus       257 ~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         257 TLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             HHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            99999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.49  E-value=6.6e-14  Score=93.31  Aligned_cols=90  Identities=23%  Similarity=0.337  Sum_probs=64.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||+..+..++.++|+||||++++++++ |..|+......    .....         +....  ....+...+..+.+
T Consensus       171 ~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~----~~~~~---------~~~~~--~~~~~~~~~~~~~~  235 (261)
T cd05068         171 TAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA----EVLQQ---------VDQGY--RMPCPPGCPKELYD  235 (261)
T ss_pred             cCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH----HHHHH---------HHcCC--CCCCCCcCCHHHHH
Confidence            57998888888999999999999999998 88887643111    11100         00000  01122234567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      ++.+||..+|.+||++.++...|+.+
T Consensus       236 li~~~l~~~P~~Rp~~~~l~~~l~~~  261 (261)
T cd05068         236 IMLDCWKEDPDDRPTFETLQWKLEDF  261 (261)
T ss_pred             HHHHHhhcCcccCCCHHHHHHHHhcC
Confidence            99999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.49  E-value=1e-13  Score=92.56  Aligned_cols=93  Identities=23%  Similarity=0.301  Sum_probs=65.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+|++|++++++++|+.|+.....  ....+...         +.....+. .........+.++
T Consensus       173 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~--~~~~~~~~---------~~~~~~~~-~~~~~~~~~~~~l  240 (267)
T cd08228         173 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM--NLFSLCQK---------IEQCDYPP-LPTEHYSEKLREL  240 (267)
T ss_pred             cChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc--cHHHHHHH---------HhcCCCCC-CChhhcCHHHHHH
Confidence            589988877788999999999999999999999764311  11111110         00000010 1112335668999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      +.+||..+|.+||++.+|++.|+.+
T Consensus       241 i~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         241 VSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             HHHHCCCCcccCcCHHHHHHHHHHh
Confidence            9999999999999999999998865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.49  E-value=4.7e-14  Score=95.04  Aligned_cols=89  Identities=27%  Similarity=0.323  Sum_probs=62.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++|+++ |..|+...... .   .....      .     .......+...+..+.+
T Consensus       191 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-~---~~~~~------~-----~~~~~~~~~~~~~~~~~  255 (280)
T cd05092         191 MPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT-E---AIECI------T-----QGRELERPRTCPPEVYA  255 (280)
T ss_pred             cCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH-H---HHHHH------H-----cCccCCCCCCCCHHHHH
Confidence            47898888888999999999999999998 77777533111 1   11000      0     00001112233456889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEG  104 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~  104 (145)
                      ++.+||..+|.+||++.+|...|++
T Consensus       256 li~~cl~~~P~~Rp~~~~l~~~l~~  280 (280)
T cd05092         256 IMQGCWQREPQQRMVIKDIHSRLQA  280 (280)
T ss_pred             HHHHHccCChhhCCCHHHHHHHHhC
Confidence            9999999999999999999988863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.49  E-value=4.9e-14  Score=94.72  Aligned_cols=89  Identities=29%  Similarity=0.442  Sum_probs=62.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++.+..++.++|+||||++++|+++ |..|+... ...   ......    ...       .....+...+..+.+
T Consensus       188 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~-~~~---~~~~~~----~~~-------~~~~~~~~~~~~~~~  252 (277)
T cd05062         188 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGM-SNE---QVLRFV----MEG-------GLLDKPDNCPDMLFE  252 (277)
T ss_pred             cChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC-CHH---HHHHHH----HcC-------CcCCCCCCCCHHHHH
Confidence            58999888888999999999999999998 56776533 111   111100    000       001112233557899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEG  104 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~  104 (145)
                      ++.+||+.+|.+||++.+++..|++
T Consensus       253 li~~~l~~~p~~Rps~~e~l~~l~~  277 (277)
T cd05062         253 LMRMCWQYNPKMRPSFLEIISSIKE  277 (277)
T ss_pred             HHHHHcCCChhhCcCHHHHHHHhhC
Confidence            9999999999999999999988763

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.49  E-value=6.4e-14  Score=95.48  Aligned_cols=91  Identities=20%  Similarity=0.312  Sum_probs=64.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+|++++++++ |..|+.............        ....      ....+......+.+
T Consensus       210 ~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~--------~~~~------~~~~~~~~~~~~~~  275 (302)
T cd05055         210 MAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLI--------KEGY------RMAQPEHAPAEIYD  275 (302)
T ss_pred             CCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHH--------HcCC------cCCCCCCCCHHHHH
Confidence            57898888888999999999999999998 888876431111111100        0000      00112223456899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      ++.+||..+|.+||++.+++..|+++
T Consensus       276 li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         276 IMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             HHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            99999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.49  E-value=1.1e-13  Score=92.59  Aligned_cols=89  Identities=24%  Similarity=0.378  Sum_probs=63.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.++.++.++|+||||++++++++ |..|+.....    ........           .......+...+..+.+
T Consensus       180 ~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~----~~~~~~~~-----------~~~~~~~~~~~~~~~~~  244 (269)
T cd05044         180 MAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN----QEVLQHVT-----------AGGRLQKPENCPDKIYQ  244 (269)
T ss_pred             cCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH----HHHHHHHh-----------cCCccCCcccchHHHHH
Confidence            57998888889999999999999999997 8888753311    11111000           00111122334567889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEG  104 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~  104 (145)
                      ++.+||..+|.+||++.++++.|++
T Consensus       245 li~~~l~~~p~~Rp~~~~i~~~l~~  269 (269)
T cd05044         245 LMTNCWAQDPSERPTFDRIQEILQN  269 (269)
T ss_pred             HHHHHcCCCcccCCCHHHHHHHHhC
Confidence            9999999999999999999998863

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.48  E-value=4.2e-14  Score=94.21  Aligned_cols=86  Identities=20%  Similarity=0.384  Sum_probs=58.5

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCC-CCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHH
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCR-SNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (145)
                      +|||++.+ ..++.++|+||||++++++++|. .|+... .......                ........+......+.
T Consensus       171 ~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~-~~~~~~~----------------~~~~~~~~~~~~~~~~~  233 (258)
T cd05078         171 VPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSAL-DSQKKLQ----------------FYEDRHQLPAPKWTELA  233 (258)
T ss_pred             cCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhc-cHHHHHH----------------HHHccccCCCCCcHHHH
Confidence            58998875 34788999999999999999985 444322 1111000                00011111222235688


Q ss_pred             HHHHhcccCCCCCCCCHHHHHHHhh
Q 032213           79 RVRLLCIQDEPNLRPSMKNVILMLE  103 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~~L~  103 (145)
                      +++.+||+.+|.+||++.++++.|+
T Consensus       234 ~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         234 NLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             HHHHHHhccChhhCCCHHHHHHhcC
Confidence            9999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.48  E-value=6.3e-14  Score=93.36  Aligned_cols=90  Identities=22%  Similarity=0.312  Sum_probs=63.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++++++ |..|+.... ..   ......         ....  ..+.....+..+.+
T Consensus       171 ~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~-~~---~~~~~~---------~~~~--~~~~~~~~~~~~~~  235 (261)
T cd05072         171 TAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMS-NS---DVMSAL---------QRGY--RMPRMENCPDELYD  235 (261)
T ss_pred             CCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCC-HH---HHHHHH---------HcCC--CCCCCCCCCHHHHH
Confidence            57998888888889999999999999998 888875331 11   111110         0000  01111223456889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      ++.+||..+|.+||++.++.+.|+.+
T Consensus       236 li~~~l~~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         236 IMKTCWKEKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             HHHHHccCCcccCcCHHHHHHHHhcC
Confidence            99999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.48  E-value=4.3e-14  Score=95.70  Aligned_cols=91  Identities=26%  Similarity=0.359  Sum_probs=64.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++|+++ |..|+... ....   ....    ..       .......+......+.+
T Consensus       201 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-~~~~---~~~~----~~-------~~~~~~~~~~~~~~~~~  265 (293)
T cd05053         201 MAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI-PVEE---LFKL----LK-------EGYRMEKPQNCTQELYH  265 (293)
T ss_pred             cCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCC-CHHH---HHHH----HH-------cCCcCCCCCCCCHHHHH
Confidence            57998888888999999999999999987 77776533 1111   1100    00       00111122233556889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      |+.+||..+|.+||++.+++..|+.+.
T Consensus       266 li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         266 LMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             HHHHHcccCcccCcCHHHHHHHHHHhh
Confidence            999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.48  E-value=4.9e-14  Score=94.86  Aligned_cols=92  Identities=20%  Similarity=0.267  Sum_probs=65.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++|+++ |..|+.....    ..+..+...         ..  ....+...+..+.+
T Consensus       186 ~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----~~~~~~~~~---------~~--~~~~~~~~~~~~~~  250 (280)
T cd05043         186 MALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP----FEMAAYLKD---------GY--RLAQPINCPDELFA  250 (280)
T ss_pred             cCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH----HHHHHHHHc---------CC--CCCCCCcCCHHHHH
Confidence            57898877788999999999999999998 8888764311    111111100         00  01112223456899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++.+||..+|.+||++.+++..|+.+.+
T Consensus       251 li~~~l~~~p~~Rps~~~~~~~l~~~~~  278 (280)
T cd05043         251 VMACCWALDPEERPSFSQLVQCLTDFHA  278 (280)
T ss_pred             HHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            9999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.48  E-value=5.8e-14  Score=99.15  Aligned_cols=93  Identities=23%  Similarity=0.350  Sum_probs=65.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++.+..++.++|+||||++++|+++ |..|+...........            .+..  ......+...+..+.+
T Consensus       306 ~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~------------~~~~--~~~~~~~~~~~~~l~~  371 (400)
T cd05105         306 MAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYN------------KIKS--GYRMAKPDHATQEVYD  371 (400)
T ss_pred             EChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHH------------HHhc--CCCCCCCccCCHHHHH
Confidence            58998888888999999999999999986 7777753211100000            0000  0011223344567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++.+||..+|++||++.+|.+.|+.+.+
T Consensus       372 li~~cl~~dP~~RPt~~~l~~~l~~l~~  399 (400)
T cd05105         372 IMVKCWNSEPEKRPSFLHLSDIVESLLP  399 (400)
T ss_pred             HHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence            9999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.48  E-value=8.6e-14  Score=93.00  Aligned_cols=90  Identities=23%  Similarity=0.308  Sum_probs=64.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||++.+..++.++|+|+||++++++++ |..|+... ....   .....         ...  ...+.+...+..+.+
T Consensus       175 ~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~-~~~~---~~~~~---------~~~--~~~~~~~~~~~~l~~  239 (266)
T cd05033         175 TAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDM-SNQD---VIKAV---------EDG--YRLPPPMDCPSALYQ  239 (266)
T ss_pred             cChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCC-CHHH---HHHHH---------HcC--CCCCCCCCCCHHHHH
Confidence            57898888888999999999999999987 88887533 1111   11100         000  001112233567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      ++.+||+.+|.+||++.+++..|+++
T Consensus       240 li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         240 LMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             HHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            99999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.48  E-value=7.5e-14  Score=92.57  Aligned_cols=88  Identities=25%  Similarity=0.331  Sum_probs=62.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.++.++.++|+||+|++++|+++ |..|+... ........            +..  ......+...+..+.+
T Consensus       163 ~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~-~~~~~~~~------------~~~--~~~~~~~~~~~~~~~~  227 (252)
T cd05084         163 TAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANL-SNQQTREA------------IEQ--GVRLPCPELCPDAVYR  227 (252)
T ss_pred             cCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccc-CHHHHHHH------------HHc--CCCCCCcccCCHHHHH
Confidence            57998888888999999999999999997 77776533 11100000            000  0011223334567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhh
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLE  103 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~  103 (145)
                      ++.+||..+|.+||++.++++.|.
T Consensus       228 li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         228 LMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHh
Confidence            999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.48  E-value=6e-14  Score=95.29  Aligned_cols=94  Identities=29%  Similarity=0.338  Sum_probs=66.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||+..+..++.++|+||||++++|+++ |..|+.....    ......         +..  +.....+......+.+
T Consensus       185 ~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~----~~~~~~---------~~~--~~~~~~~~~~~~~~~~  249 (297)
T cd05089         185 MAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC----AELYEK---------LPQ--GYRMEKPRNCDDEVYE  249 (297)
T ss_pred             cCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH----HHHHHH---------Hhc--CCCCCCCCCCCHHHHH
Confidence            57998887788999999999999999997 8888764311    011100         000  0011122234556889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEIP  109 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~~  109 (145)
                      |+.+||..+|.+||++.+++..|+.+....
T Consensus       250 li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~  279 (297)
T cd05089         250 LMRQCWRDRPYERPPFAQISVQLSRMLEAR  279 (297)
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence            999999999999999999999988776544

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.48  E-value=7.2e-14  Score=93.58  Aligned_cols=90  Identities=23%  Similarity=0.335  Sum_probs=62.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||+..+..++.++|+||||++++++++ |..|+... ....   +....    ..       ......+...+..+.+
T Consensus       181 ~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-~~~~---~~~~~----~~-------~~~~~~~~~~~~~~~~  245 (272)
T cd05075         181 IAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGV-ENSE---IYDYL----RQ-------GNRLKQPPDCLDGLYS  245 (272)
T ss_pred             CCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCC-CHHH---HHHHH----Hc-------CCCCCCCCCCCHHHHH
Confidence            46777777778899999999999999998 67777532 1111   11000    00       0011112234556899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      ++.+||..+|++||++.+++..|+.+
T Consensus       246 li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         246 LMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             HHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            99999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.48  E-value=7.4e-14  Score=92.99  Aligned_cols=90  Identities=24%  Similarity=0.378  Sum_probs=63.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||++....++.++|+|+||++++++++ |..|+... ...   .......         .  ....+.+...+..+.+
T Consensus       171 ~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~-~~~---~~~~~~~---------~--~~~~~~~~~~~~~~~~  235 (261)
T cd05148         171 TAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGM-NNH---EVYDQIT---------A--GYRMPCPAKCPQEIYK  235 (261)
T ss_pred             cCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcC-CHH---HHHHHHH---------h--CCcCCCCCCCCHHHHH
Confidence            46888877788899999999999999998 77787543 111   1111000         0  0111223344567889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      ++.+||..+|.+||++.++.+.|+.+
T Consensus       236 ~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         236 IMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             HHHHHcCCCchhCcCHHHHHHHHhcC
Confidence            99999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.48  E-value=7.1e-14  Score=93.41  Aligned_cols=86  Identities=19%  Similarity=0.355  Sum_probs=57.7

Q ss_pred             CCCcccc-cCCcccccchhhHHHHHHHHH-hCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHH
Q 032213            1 MSPEWQN-SGLITVKSDVYSFGVVLLEIV-CCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~-~~~~~~~~dv~s~g~v~~el~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (145)
                      +|||++. +..++.++|+||||++++|++ .|..|+.... ......+       . ...    .    .........+.
T Consensus       175 ~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~-~~~~~~~-------~-~~~----~----~~~~~~~~~~~  237 (262)
T cd05077         175 IAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKT-LAEKERF-------Y-EGQ----C----MLVTPSCKELA  237 (262)
T ss_pred             cChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcc-hhHHHHH-------H-hcC----c----cCCCCChHHHH
Confidence            5899886 466888999999999999997 4666654321 0000000       0 000    0    00111134578


Q ss_pred             HHHHhcccCCCCCCCCHHHHHHHhh
Q 032213           79 RVRLLCIQDEPNLRPSMKNVILMLE  103 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~~L~  103 (145)
                      +|+.+||+.+|.+||++.+++..++
T Consensus       238 ~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         238 DLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHhcC
Confidence            9999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.47  E-value=6.7e-14  Score=93.24  Aligned_cols=90  Identities=18%  Similarity=0.240  Sum_probs=64.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++....++.++|+||||++++++++ |..|+... ..........            .  ......+......+.+
T Consensus       165 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~-~~~~~~~~~~------------~--~~~~~~~~~~~~~l~~  229 (257)
T cd05115         165 YAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKM-KGPEVMSFIE------------Q--GKRLDCPAECPPEMYA  229 (257)
T ss_pred             CCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcC-CHHHHHHHHH------------C--CCCCCCCCCCCHHHHH
Confidence            57888877788899999999999999986 88887643 1111111000            0  0111223334567889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      ++.+||..+|.+||++.+|.+.|+..
T Consensus       230 li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         230 LMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            99999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.47  E-value=6.3e-14  Score=93.92  Aligned_cols=91  Identities=27%  Similarity=0.367  Sum_probs=64.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++....++.++|+||||++++|+++ |..|+... ..   ......         +..  ......+......+.+
T Consensus       178 ~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~-~~---~~~~~~---------~~~--~~~~~~~~~~~~~~~~  242 (270)
T cd05047         178 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-TC---AELYEK---------LPQ--GYRLEKPLNCDDEVYD  242 (270)
T ss_pred             CChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCcccc-CH---HHHHHH---------HhC--CCCCCCCCcCCHHHHH
Confidence            57898877788899999999999999996 88887532 11   011100         000  0011112223456889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      ++.+||..+|.+||++.+++..|+.+.
T Consensus       243 li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         243 LMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             HHHHHcccChhhCCCHHHHHHHHHHhh
Confidence            999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.47  E-value=9.1e-14  Score=93.53  Aligned_cols=94  Identities=19%  Similarity=0.242  Sum_probs=66.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||...+..++.++|+||||++++|+++ |..|+... ...   .+...         +..  ....+.+...+..+.+
T Consensus       178 ~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~-~~~---~~~~~---------~~~--~~~~~~~~~~~~~~~~  242 (279)
T cd05109         178 MALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGI-PAR---EIPDL---------LEK--GERLPQPPICTIDVYM  242 (279)
T ss_pred             CCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC-CHH---HHHHH---------HHC--CCcCCCCccCCHHHHH
Confidence            57888887788999999999999999987 77787643 111   11110         000  0011122234556889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEIP  109 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~~  109 (145)
                      ++.+||..+|..||++.+++..|+.+...+
T Consensus       243 li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~  272 (279)
T cd05109         243 IMVKCWMIDSECRPRFRELVDEFSRMARDP  272 (279)
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence            999999999999999999999998776554

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.47  E-value=1.1e-13  Score=92.52  Aligned_cols=94  Identities=22%  Similarity=0.304  Sum_probs=65.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+|+||++++++++|..|+.....  ....+..         .+.....+. ..+......+.++
T Consensus       173 ~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~---------~~~~~~~~~-~~~~~~~~~~~~l  240 (267)
T cd08229         173 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM--NLYSLCK---------KIEQCDYPP-LPSDHYSEELRQL  240 (267)
T ss_pred             cCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc--hHHHHhh---------hhhcCCCCC-CCcccccHHHHHH
Confidence            579988888888999999999999999999999763311  1111110         010010010 0112345678999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      +.+||..+|.+||++.+|++.+.++.
T Consensus       241 i~~~l~~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         241 VNMCINPDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             HHHhcCCCcccCCCHHHHHHHHhhhc
Confidence            99999999999999999999988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.47  E-value=8.2e-14  Score=94.15  Aligned_cols=89  Identities=22%  Similarity=0.260  Sum_probs=62.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++++++ |..|+... ...   .....    .....   .    ...+...+..+.+
T Consensus       199 ~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~-~~~---~~~~~----~~~~~---~----~~~~~~~~~~l~~  263 (288)
T cd05050         199 MPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGM-AHE---EVIYY----VRDGN---V----LSCPDNCPLELYN  263 (288)
T ss_pred             cCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-CHH---HHHHH----HhcCC---C----CCCCCCCCHHHHH
Confidence            47888887888999999999999999987 66676532 111   11100    00000   0    1122234567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEG  104 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~  104 (145)
                      ++.+||+.+|.+||++.+++..|++
T Consensus       264 li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         264 LMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             HHHHHcccCcccCCCHHHHHHHhhC
Confidence            9999999999999999999998873

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.47  E-value=5.2e-14  Score=95.22  Aligned_cols=92  Identities=29%  Similarity=0.345  Sum_probs=65.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||++.+..++.++|+||||++++|+++ |..|+... ...   .+....         ....  ....+......+.+
T Consensus       196 ~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~-~~~---~~~~~~---------~~~~--~~~~~~~~~~~~~~  260 (290)
T cd05045         196 MAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI-APE---RLFNLL---------KTGY--RMERPENCSEEMYN  260 (290)
T ss_pred             cCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCC-CHH---HHHHHH---------hCCC--CCCCCCCCCHHHHH
Confidence            57888877778999999999999999998 88887543 111   111110         0000  11122233557889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++..||..+|.+||++.+++..|+++..
T Consensus       261 ~i~~cl~~~P~~Rp~~~~i~~~l~~~~~  288 (290)
T cd05045         261 LMLTCWKQEPDKRPTFADISKELEKMMV  288 (290)
T ss_pred             HHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence            9999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>PTZ00284 protein kinase; Provisional

Probab=99.46  E-value=1.3e-13  Score=99.10  Aligned_cols=99  Identities=11%  Similarity=0.102  Sum_probs=61.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHH----HHHH----hHhhhhh---------
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYN----CFIA----KELNKLV---------   63 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~~~~~---------   63 (145)
                      ||||++.+..++.++|||||||+++||++|+.||..... ......+.....    .+..    .....+.         
T Consensus       312 ~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~-~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  390 (467)
T PTZ00284        312 RSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDN-LEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPC  390 (467)
T ss_pred             cCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhccccccc
Confidence            689999988899999999999999999999999875421 111111111000    0000    0000000         


Q ss_pred             -Cc---------chhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           64 -GE---------DEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        64 -~~---------~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                       .+         ...........+.+|+.+||..||.+||++.+++.
T Consensus       391 ~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~  437 (467)
T PTZ00284        391 TDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT  437 (467)
T ss_pred             CCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence             00         00000011345779999999999999999999986

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.46  E-value=1.1e-13  Score=92.02  Aligned_cols=90  Identities=26%  Similarity=0.283  Sum_probs=63.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++....++.++|+|+||++++++++ |..|+...    ....+....         ..  ......+...+..+.+
T Consensus       166 ~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~----~~~~~~~~~---------~~--~~~~~~~~~~~~~~~~  230 (256)
T cd05082         166 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI----PLKDVVPRV---------EK--GYKMDAPDGCPPVVYD  230 (256)
T ss_pred             cCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC----CHHHHHHHH---------hc--CCCCCCCCCCCHHHHH
Confidence            57998888888999999999999999997 87776532    111111110         00  0011122334567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      ++.+||..+|.+||++.+++..|+.+
T Consensus       231 li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         231 VMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             HHHHHhcCChhhCcCHHHHHHHHhcC
Confidence            99999999999999999999988764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.46  E-value=6.9e-14  Score=101.86  Aligned_cols=85  Identities=18%  Similarity=0.230  Sum_probs=64.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      .|||.++..+|+.++|||.|||.+|||++ |..|+... ......+.++              -..+++.|..++..+++
T Consensus       282 CaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~-~g~qIL~~iD--------------~~erLpRPk~csedIY~  346 (1039)
T KOG0199|consen  282 CAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGC-RGIQILKNID--------------AGERLPRPKYCSEDIYQ  346 (1039)
T ss_pred             cCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCC-CHHHHHHhcc--------------ccccCCCCCCChHHHHH
Confidence            37999999999999999999999999985 56677543 1111111110              12234567778899999


Q ss_pred             HHHhcccCCCCCCCCHHHHHH
Q 032213           80 VRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ++..||..+|.+||+|..+.+
T Consensus       347 imk~cWah~paDRptFsair~  367 (1039)
T KOG0199|consen  347 IMKNCWAHNPADRPTFSAIRE  367 (1039)
T ss_pred             HHHHhccCCccccccHHHHHH
Confidence            999999999999999999964

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.46  E-value=1.4e-13  Score=91.77  Aligned_cols=89  Identities=25%  Similarity=0.337  Sum_probs=63.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||+..+..++.++|+||||++++++++ |..|+.... .   ......         +...  ...+.+...+..+.+
T Consensus       170 ~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~-~---~~~~~~---------~~~~--~~~~~~~~~~~~~~~  234 (260)
T cd05070         170 TAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN-N---REVLEQ---------VERG--YRMPCPQDCPISLHE  234 (260)
T ss_pred             cChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC-H---HHHHHH---------HHcC--CCCCCCCcCCHHHHH
Confidence            57898877788899999999999999998 777775431 1   111111         0000  011223334567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEG  104 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~  104 (145)
                      ++.+||..+|.+||++.++...|+.
T Consensus       235 li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         235 LMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             HHHHHcccCcccCcCHHHHHHHHhc
Confidence            9999999999999999999988864

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.46  E-value=1e-13  Score=93.09  Aligned_cols=89  Identities=28%  Similarity=0.517  Sum_probs=62.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||.+.+..++.++|+|+||++++|+++ |..|+... ....   ......           .......+...+..+.+
T Consensus       188 ~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~-~~~~---~~~~~~-----------~~~~~~~~~~~~~~~~~  252 (277)
T cd05032         188 MAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGL-SNEE---VLKFVI-----------DGGHLDLPENCPDKLLE  252 (277)
T ss_pred             cCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccC-CHHH---HHHHHh-----------cCCCCCCCCCCCHHHHH
Confidence            47898887788999999999999999998 77777533 1111   111100           00011122233567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEG  104 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~  104 (145)
                      ++.+||..+|.+|||+.+++..|+.
T Consensus       253 li~~~l~~~p~~Rpt~~~l~~~l~~  277 (277)
T cd05032         253 LMRMCWQYNPKMRPTFLEIVSSLKD  277 (277)
T ss_pred             HHHHHcCCChhhCCCHHHHHHHhcC
Confidence            9999999999999999999988763

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.45  E-value=1.4e-13  Score=92.79  Aligned_cols=89  Identities=27%  Similarity=0.334  Sum_probs=62.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++|+++ |..|+... .........   .    .       ....+.+...+..+.+
T Consensus       193 ~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~-~~~~~~~~~---~----~-------~~~~~~~~~~~~~~~~  257 (283)
T cd05090         193 MPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGF-SNQEVIEMV---R----K-------RQLLPCSEDCPPRMYS  257 (283)
T ss_pred             cChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHH---H----c-------CCcCCCCCCCCHHHHH
Confidence            57898887888999999999999999998 77777543 111111100   0    0       0001122233556889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEG  104 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~  104 (145)
                      ++.+||..+|.+||++.++.+.|.+
T Consensus       258 li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         258 LMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHHHcccCcccCcCHHHHHHHhhc
Confidence            9999999999999999999988864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.45  E-value=2.3e-14  Score=104.52  Aligned_cols=87  Identities=22%  Similarity=0.325  Sum_probs=69.1

Q ss_pred             CCCcccccC--CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHH
Q 032213            1 MSPEWQNSG--LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~--~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (145)
                      ||||++..+  .|..++|||||||.++||.||++||....++......++             +....++.|.+...+..
T Consensus       743 MAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVG-------------myKvHP~iPeelsaeak  809 (1226)
T KOG4279|consen  743 MAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVG-------------MYKVHPPIPEELSAEAK  809 (1226)
T ss_pred             hChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhc-------------ceecCCCCcHHHHHHHH
Confidence            899999754  488999999999999999999999986644333222211             22334467788889999


Q ss_pred             HHHHhcccCCCCCCCCHHHHHH
Q 032213           79 RVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +++++|+.++|.+||++++++.
T Consensus       810 ~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  810 NFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             HHHHHHcCCCcccCccHHHhcc
Confidence            9999999999999999999986

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.45  E-value=1.4e-13  Score=93.74  Aligned_cols=96  Identities=21%  Similarity=0.210  Sum_probs=61.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhC--CCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCC--RSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (145)
                      ||||++..+.++.++|+||||++++|++++  ..|+... ..   .............. .....   ...+..++..+.
T Consensus       207 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~-~~---~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~  278 (304)
T cd05096         207 MAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGEL-TD---EQVIENAGEFFRDQ-GRQVY---LFRPPPCPQGLY  278 (304)
T ss_pred             cCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcC-CH---HHHHHHHHHHhhhc-ccccc---ccCCCCCCHHHH
Confidence            589988888899999999999999999864  4455432 11   11111111100000 00000   011223355789


Q ss_pred             HHHHhcccCCCCCCCCHHHHHHHhhc
Q 032213           79 RVRLLCIQDEPNLRPSMKNVILMLEG  104 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~~L~~  104 (145)
                      +++.+||..+|.+||++.+|...|++
T Consensus       279 ~li~~cl~~~p~~RPs~~~i~~~l~~  304 (304)
T cd05096         279 ELMLQCWSRDCRERPSFSDIHAFLTE  304 (304)
T ss_pred             HHHHHHccCCchhCcCHHHHHHHHhC
Confidence            99999999999999999999988763

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.45  E-value=1.8e-13  Score=91.26  Aligned_cols=89  Identities=28%  Similarity=0.401  Sum_probs=63.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||+..+..++.++|+||||++++++++ |..|+......    ......         ...  .....+...+..+.+
T Consensus       170 ~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~----~~~~~~---------~~~--~~~~~~~~~~~~~~~  234 (260)
T cd05069         170 TAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR----EVLEQV---------ERG--YRMPCPQGCPESLHE  234 (260)
T ss_pred             CCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHH---------HcC--CCCCCCcccCHHHHH
Confidence            57888877888999999999999999998 78787643111    111110         000  011223344667899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEG  104 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~  104 (145)
                      ++.+||..+|.+||++.+|.+.|+.
T Consensus       235 li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         235 LMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             HHHHHccCCcccCcCHHHHHHHHhc
Confidence            9999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.45  E-value=1.1e-13  Score=92.13  Aligned_cols=88  Identities=20%  Similarity=0.275  Sum_probs=60.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||+..+..++.++|+||||++++++++ |..|+..... .   ......        ..   ......+......+.+
T Consensus       168 ~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~-~---~~~~~~--------~~---~~~~~~~~~~~~~~~~  232 (256)
T cd05113         168 SPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN-S---ETVEKV--------SQ---GLRLYRPHLASEKVYA  232 (256)
T ss_pred             CCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH-H---HHHHHH--------hc---CCCCCCCCCCCHHHHH
Confidence            47888877778899999999999999998 8888754311 1   111100        00   0000111123467899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhh
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLE  103 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~  103 (145)
                      ++.+||..+|.+||++.+++..|+
T Consensus       233 li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         233 IMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             HHHHHcCCCcccCCCHHHHHHhhC
Confidence            999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.45  E-value=3.6e-13  Score=91.40  Aligned_cols=95  Identities=23%  Similarity=0.245  Sum_probs=61.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh--CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC--CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (145)
                      ++||+...+.++.++|+||||++++|+++  |..|+... ...   ............. .....   .+.+...+..+.
T Consensus       199 ~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~-~~~---~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~  270 (296)
T cd05095         199 MSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL-SDE---QVIENTGEFFRDQ-GRQVY---LPKPALCPDSLY  270 (296)
T ss_pred             CCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc-ChH---HHHHHHHHHHhhc-ccccc---CCCCCCCCHHHH
Confidence            46777777788999999999999999997  55666533 111   1111110000000 00000   011222346789


Q ss_pred             HHHHhcccCCCCCCCCHHHHHHHhh
Q 032213           79 RVRLLCIQDEPNLRPSMKNVILMLE  103 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~~L~  103 (145)
                      +++.+||+.+|.+||++.+|.+.|+
T Consensus       271 ~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         271 KLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             HHHHHHcCCCcccCCCHHHHHHHHh
Confidence            9999999999999999999999886

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.45  E-value=1.8e-13  Score=90.98  Aligned_cols=89  Identities=24%  Similarity=0.299  Sum_probs=62.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||++.+..++.++|+||||++++++++ |..|+... ....   .......          .......+...+..+.+
T Consensus       167 ~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~-~~~~---~~~~~~~----------~~~~~~~~~~~~~~~~~  232 (257)
T cd05040         167 CAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGL-SGSQ---ILKKIDK----------EGERLERPEACPQDIYN  232 (257)
T ss_pred             cCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCC-CHHH---HHHHHHh----------cCCcCCCCccCCHHHHH
Confidence            57888887888999999999999999998 88887533 1111   1110000          00111122233567889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhh
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLE  103 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~  103 (145)
                      ++.+||..+|.+||++.+++..|.
T Consensus       233 li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         233 VMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHHHHCCCCcccCCCHHHHHHHhc
Confidence            999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.45  E-value=1.6e-13  Score=91.46  Aligned_cols=89  Identities=30%  Similarity=0.432  Sum_probs=63.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||++.+..++.++|+||||++++|+++ |..|+..... .   .....         +..  ....+.+...+..+.+
T Consensus       170 ~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-~---~~~~~---------~~~--~~~~~~~~~~~~~~~~  234 (260)
T cd05067         170 TAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN-P---EVIQN---------LER--GYRMPRPDNCPEELYE  234 (260)
T ss_pred             cCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh-H---HHHHH---------HHc--CCCCCCCCCCCHHHHH
Confidence            47888877778889999999999999998 8888864311 1   11110         000  0011222233557999


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEG  104 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~  104 (145)
                      ++.+||..+|.+||++.++...|+.
T Consensus       235 li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         235 LMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             HHHHHccCChhhCCCHHHHHHHhhc
Confidence            9999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.45  E-value=3.9e-13  Score=89.68  Aligned_cols=93  Identities=24%  Similarity=0.351  Sum_probs=65.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcH-HHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDL-RTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   79 (145)
                      +|||++.+..++.++|+|+||++++++++|..|+....  .........         +..  ....+.+. .....+.+
T Consensus       173 ~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~---------~~~--~~~~~~~~~~~~~~~~~  239 (267)
T cd08224         173 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK--MNLYSLCKK---------IEK--CDYPPLPADHYSEELRD  239 (267)
T ss_pred             cCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC--ccHHHHHhh---------hhc--CCCCCCChhhcCHHHHH
Confidence            47898888888999999999999999999999875431  111111100         000  00011222 33556889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      ++.+||..+|.+||++.+|+..|..+.
T Consensus       240 ~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         240 LVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             HHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            999999999999999999999988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.44  E-value=4.9e-14  Score=91.23  Aligned_cols=91  Identities=23%  Similarity=0.349  Sum_probs=63.4

Q ss_pred             CCcccc---cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcch--hhcHHHHHH
Q 032213            2 SPEWQN---SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDE--EVDLRTLET   76 (145)
Q Consensus         2 aPe~~~---~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~   76 (145)
                      |||.+.   +...++++||||+||++|+++.|..||...........++              +.....  +.....+..
T Consensus       206 APELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLA--------------v~n~q~s~P~~~~yse~  271 (302)
T KOG2345|consen  206 APELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALA--------------VQNAQISIPNSSRYSEA  271 (302)
T ss_pred             CchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEe--------------eeccccccCCCCCccHH
Confidence            788775   4457899999999999999999999987432211111110              111111  111114667


Q ss_pred             HHHHHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           77 MVRVRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        77 ~~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      +..++..|++.+|.+||++.+++..+..+.
T Consensus       272 l~~lik~mlqvdP~qRP~i~~ll~~~d~Li  301 (302)
T KOG2345|consen  272 LHQLIKSMLQVDPNQRPTIPELLSKLDDLI  301 (302)
T ss_pred             HHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence            999999999999999999999998887653

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.44  E-value=1.4e-13  Score=94.15  Aligned_cols=92  Identities=23%  Similarity=0.352  Sum_probs=65.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++.+..++.++|+|+||++++++++ |..|+... ....   +.....    .       ......+...+..+.+
T Consensus       203 ~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~-~~~~---~~~~~~----~-------~~~~~~~~~~~~~l~~  267 (314)
T cd05099         203 MAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGI-PVEE---LFKLLR----E-------GHRMDKPSNCTHELYM  267 (314)
T ss_pred             cCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCC-CHHH---HHHHHH----c-------CCCCCCCCCCCHHHHH
Confidence            57998888888999999999999999998 77776532 1111   111000    0       0111122333556889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++.+||..+|.+||++.+++..|.++..
T Consensus       268 li~~cl~~~p~~Rps~~~ll~~l~~~~~  295 (314)
T cd05099         268 LMRECWHAVPTQRPTFKQLVEALDKVLA  295 (314)
T ss_pred             HHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence            9999999999999999999999987754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.44  E-value=1.4e-13  Score=93.88  Aligned_cols=92  Identities=25%  Similarity=0.356  Sum_probs=65.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+|++++++++ |..|+... ..........       .       ......+......+.+
T Consensus       209 ~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~-~~~~~~~~~~-------~-------~~~~~~~~~~~~~~~~  273 (307)
T cd05098         209 MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLK-------E-------GHRMDKPSNCTNELYM  273 (307)
T ss_pred             eChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC-CHHHHHHHHH-------c-------CCCCCCCCcCCHHHHH
Confidence            57998888888999999999999999998 77776532 1111110000       0       0111223334567889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++.+||..+|.+||++.+|+..|+.+..
T Consensus       274 li~~~l~~~p~~Rps~~evl~~l~~~~~  301 (307)
T cd05098         274 MMRDCWHAVPSQRPTFKQLVEDLDRILA  301 (307)
T ss_pred             HHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence            9999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.44  E-value=1.4e-13  Score=92.58  Aligned_cols=86  Identities=20%  Similarity=0.356  Sum_probs=58.1

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHH-hCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHH
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIV-CCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (145)
                      +|||++.+ ..++.++|+|+||++++|++ +|..|+.... .......                .......+......+.
T Consensus       187 ~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-~~~~~~~----------------~~~~~~~~~~~~~~~~  249 (274)
T cd05076         187 IAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERT-PSEKERF----------------YEKKHRLPEPSCKELA  249 (274)
T ss_pred             cCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccC-hHHHHHH----------------HHhccCCCCCCChHHH
Confidence            57898864 55788999999999999985 6777775431 1111000                0000011111224588


Q ss_pred             HHHHhcccCCCCCCCCHHHHHHHhh
Q 032213           79 RVRLLCIQDEPNLRPSMKNVILMLE  103 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~~L~  103 (145)
                      +++.+||+.+|.+||++.+++..|+
T Consensus       250 ~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         250 TLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             HHHHHHcccChhhCcCHHHHHHhhC
Confidence            9999999999999999999998774

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.44  E-value=1.6e-13  Score=92.97  Aligned_cols=95  Identities=23%  Similarity=0.262  Sum_probs=61.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh--CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC--CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (145)
                      ||||++.+..++.++||||||++++|+++  +..|+... ..   .................    .....+...+..+.
T Consensus       199 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~-~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~  270 (296)
T cd05051         199 MAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHL-TD---QQVIENAGHFFRDDGRQ----IYLPRPPNCPKDIY  270 (296)
T ss_pred             cCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCc-Ch---HHHHHHHHhcccccccc----ccCCCccCCCHHHH
Confidence            57898887788999999999999999987  45555432 11   11111110000000000    00111222346789


Q ss_pred             HHHHhcccCCCCCCCCHHHHHHHhh
Q 032213           79 RVRLLCIQDEPNLRPSMKNVILMLE  103 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~~L~  103 (145)
                      +++.+||+.+|.+||++.+|+..|+
T Consensus       271 ~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         271 ELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             HHHHHHhccChhcCCCHHHHHHHhc
Confidence            9999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.44  E-value=3.4e-13  Score=90.08  Aligned_cols=90  Identities=27%  Similarity=0.408  Sum_probs=63.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||+..+..++.++|+||||++++++++ |..|+.... ...   ....         +..  ......+...+..+.+
T Consensus       170 ~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~-~~~---~~~~---------~~~--~~~~~~~~~~~~~l~~  234 (262)
T cd05071         170 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-NRE---VLDQ---------VER--GYRMPCPPECPESLHD  234 (262)
T ss_pred             cCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC-hHH---HHHH---------Hhc--CCCCCCccccCHHHHH
Confidence            57888877788999999999999999999 676765331 111   0000         000  0011122344567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      ++.+||+.+|.+||++.+++..|+..
T Consensus       235 li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         235 LMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             HHHHHccCCcccCCCHHHHHHHHHHh
Confidence            99999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.44  E-value=1.7e-13  Score=93.30  Aligned_cols=93  Identities=24%  Similarity=0.322  Sum_probs=65.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++++++ |..|+... +..   .+....   . .       ......+...+..+.+
T Consensus       206 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~-~~~---~~~~~~---~-~-------~~~~~~~~~~~~~~~~  270 (304)
T cd05101         206 MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVE---ELFKLL---K-E-------GHRMDKPANCTNELYM  270 (304)
T ss_pred             eCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC-CHH---HHHHHH---H-c-------CCcCCCCCCCCHHHHH
Confidence            57998888888999999999999999998 66666432 111   111100   0 0       0011122334567889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      ++.+||..+|.+||++.+++..|+.+...
T Consensus       271 li~~cl~~~p~~Rps~~e~l~~l~~~~~~  299 (304)
T cd05101         271 MMRDCWHAIPSHRPTFKQLVEDLDRILTL  299 (304)
T ss_pred             HHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence            99999999999999999999999876543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.44  E-value=5.2e-13  Score=90.70  Aligned_cols=94  Identities=10%  Similarity=0.074  Sum_probs=63.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||+..+..++.++|+||+|++++|+++|..||...............       ..+..+..... .....+..+.++
T Consensus       200 ~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~  271 (294)
T PHA02882        200 AGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKC-------DFIKRLHEGKI-KIKNANKFIYDF  271 (294)
T ss_pred             cCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHH-------HHHHHhhhhhh-ccCCCCHHHHHH
Confidence            5788877788899999999999999999999999754222221111110       00111111111 112235678999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHh
Q 032213           81 RLLCIQDEPNLRPSMKNVILML  102 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L  102 (145)
                      +..||..+|.+||++.++.+.|
T Consensus       272 ~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        272 IECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             HHHHHhCCCCCCCCHHHHHHhh
Confidence            9999999999999999998866

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.44  E-value=1.8e-13  Score=91.58  Aligned_cols=90  Identities=20%  Similarity=0.268  Sum_probs=63.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||++.+..++.++|+|+||++++|+++ |..|+... ...   ....+..         .  ....+.+...+..+.+
T Consensus       178 ~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~-~~~---~~~~~i~---------~--~~~~~~~~~~~~~~~~  242 (269)
T cd05065         178 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM-SNQ---DVINAIE---------Q--DYRLPPPMDCPTALHQ  242 (269)
T ss_pred             cCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCC-CHH---HHHHHHH---------c--CCcCCCcccCCHHHHH
Confidence            47898888888999999999999999885 88887543 111   1111110         0  0011122334556889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      ++.+||..+|.+||++.+++..|+.+
T Consensus       243 li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         243 LMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            99999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.44  E-value=3.6e-14  Score=100.61  Aligned_cols=85  Identities=25%  Similarity=0.368  Sum_probs=58.0

Q ss_pred             CCCcccccC-----------CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcch--
Q 032213            1 MSPEWQNSG-----------LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDE--   67 (145)
Q Consensus         1 ~aPe~~~~~-----------~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   67 (145)
                      |+||.+...           +.+.++||||+||++|+|++|+.||...         ...      -..+..+.++..  
T Consensus       528 MsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~---------~n~------~aKl~aI~~P~~~I  592 (677)
T KOG0596|consen  528 MSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI---------INQ------IAKLHAITDPNHEI  592 (677)
T ss_pred             cCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH---------HHH------HHHHHhhcCCCccc
Confidence            677766422           2568999999999999999999998633         100      011222333311  


Q ss_pred             hhcHHH-HHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 EVDLRT-LETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 ~~~~~~-~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ++|.-. ..++.++|.+||+.||++||++.+|++
T Consensus       593 efp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  593 EFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             cccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence            222211 223899999999999999999999976

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.44  E-value=1.7e-13  Score=97.83  Aligned_cols=84  Identities=20%  Similarity=0.319  Sum_probs=64.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++....++..+||||+||++|-|+.|++||....-.                ..+..+....-..|.....+..+|
T Consensus       185 IAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vk----------------ety~~Ik~~~Y~~P~~ls~~A~dL  248 (592)
T KOG0575|consen  185 IAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVK----------------ETYNKIKLNEYSMPSHLSAEAKDL  248 (592)
T ss_pred             cChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHH----------------HHHHHHHhcCcccccccCHHHHHH
Confidence            6899999888999999999999999999999999754100                111112222223344557778999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +...|..+|.+||++.+|+.
T Consensus       249 I~~lL~~~P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  249 IRKLLRPNPSERPSLDEVLD  268 (592)
T ss_pred             HHHHhcCCcccCCCHHHHhc
Confidence            99999999999999999986

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.43  E-value=1.6e-13  Score=96.91  Aligned_cols=92  Identities=20%  Similarity=0.319  Sum_probs=64.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++....++.++|+|+||++++|+++ |..|+.............        ..      ......+......+.+
T Consensus       308 ~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~--------~~------~~~~~~p~~~~~~l~~  373 (401)
T cd05107         308 MAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAI--------KR------GYRMAKPAHASDEIYE  373 (401)
T ss_pred             eChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHH--------Hc------CCCCCCCCCCCHHHHH
Confidence            57888877778899999999999999997 777775331111000000        00      0011122234567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      ++.+||..+|..||++.+|+..|+.+.
T Consensus       374 li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         374 IMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             HHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.43  E-value=3.2e-13  Score=89.42  Aligned_cols=88  Identities=25%  Similarity=0.357  Sum_probs=62.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||.+.+..++.++|+|++|++++++++ |..|+.... ...   ....         +..  ......+...+..+.+
T Consensus       162 ~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~-~~~---~~~~---------~~~--~~~~~~~~~~~~~~~~  226 (251)
T cd05041         162 TAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMS-NQQ---TRER---------IES--GYRMPAPQLCPEEIYR  226 (251)
T ss_pred             CChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCC-HHH---HHHH---------Hhc--CCCCCCCccCCHHHHH
Confidence            47888887788999999999999999998 676765331 111   1000         000  0011123334567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhh
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLE  103 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~  103 (145)
                      ++.+||..+|.+||++.++++.|.
T Consensus       227 li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         227 LMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             HHHHHhccChhhCcCHHHHHHHhh
Confidence            999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.43  E-value=2.9e-13  Score=91.37  Aligned_cols=99  Identities=14%  Similarity=0.043  Sum_probs=61.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHh---------hhhhCcch----
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKEL---------NKLVGEDE----   67 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~----   67 (145)
                      +|||++.+..++.++|+||+|++++|+++|..||......... ...............         .....+..    
T Consensus       168 ~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (287)
T cd07848         168 RSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQL-FTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQ  246 (287)
T ss_pred             CCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHhhCCCCHHHHHhhhccchhcccccCcccCcc
Confidence            5899998888999999999999999999999988653111111 111100000000000         00000000    


Q ss_pred             ----hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 ----EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 ----~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                          ......+..+.+|+.+||..||.+||++.+++.
T Consensus       247 ~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         247 SLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             cHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                001123456899999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.43  E-value=2.3e-13  Score=91.15  Aligned_cols=92  Identities=24%  Similarity=0.307  Sum_probs=65.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++....++.++|+||||++++|+++ |..|+......    ......         .  .......+...+..+.+
T Consensus       175 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~----~~~~~~---------~--~~~~~~~~~~~~~~~~~  239 (270)
T cd05056         175 MAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN----DVIGRI---------E--NGERLPMPPNCPPTLYS  239 (270)
T ss_pred             cChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH----HHHHHH---------H--cCCcCCCCCCCCHHHHH
Confidence            47898877788899999999999999885 88887643111    111100         0  00111223334567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++.+||..+|.+||++.+++..|+.+..
T Consensus       240 li~~~l~~~P~~Rpt~~~~~~~l~~~~~  267 (270)
T cd05056         240 LMTKCWAYDPSKRPRFTELKAQLSDILQ  267 (270)
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            9999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.43  E-value=2.3e-13  Score=90.06  Aligned_cols=88  Identities=20%  Similarity=0.273  Sum_probs=62.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++++++ |..|+... ..   ......         +....  ....+...+..+.+
T Consensus       161 ~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~-~~---~~~~~~---------~~~~~--~~~~~~~~~~~~~~  225 (250)
T cd05085         161 TAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGM-TN---QQAREQ---------VEKGY--RMSCPQKCPDDVYK  225 (250)
T ss_pred             cCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCC-CH---HHHHHH---------HHcCC--CCCCCCCCCHHHHH
Confidence            57998888888999999999999999998 88787533 11   011000         00000  11112233567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhh
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLE  103 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~  103 (145)
                      ++.+||..+|.+||++.++...|.
T Consensus       226 li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         226 VMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HHHHHcccCcccCCCHHHHHHHhc
Confidence            999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.43  E-value=1.6e-13  Score=93.50  Aligned_cols=94  Identities=20%  Similarity=0.256  Sum_probs=65.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||++.+..++.++|+||||++++|+++ |..|+... ....   ......    .       ....+.+......+..
T Consensus       178 ~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~-~~~~---~~~~~~----~-------~~~~~~~~~~~~~~~~  242 (303)
T cd05110         178 MALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI-PTRE---IPDLLE----K-------GERLPQPPICTIDVYM  242 (303)
T ss_pred             CCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCC-CHHH---HHHHHH----C-------CCCCCCCCCCCHHHHH
Confidence            57888887788999999999999999987 77777532 1111   111100    0       0011112223456889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEIP  109 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~~  109 (145)
                      ++..||..+|.+||++.+++..|+.+....
T Consensus       243 li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~  272 (303)
T cd05110         243 VMVKCWMIDADSRPKFKELAAEFSRMARDP  272 (303)
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence            999999999999999999999999876543

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.43  E-value=2.2e-13  Score=90.59  Aligned_cols=87  Identities=21%  Similarity=0.314  Sum_probs=61.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+|+||++++++++ |..|+.... ...   ....         +....  ....+...+..+.+
T Consensus       168 ~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-~~~---~~~~---------~~~~~--~~~~~~~~~~~~~~  232 (256)
T cd05059         168 APPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFS-NSE---VVES---------VSAGY--RLYRPKLAPTEVYT  232 (256)
T ss_pred             cCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCC-HHH---HHHH---------HHcCC--cCCCCCCCCHHHHH
Confidence            57888887888999999999999999998 677775431 111   1100         00000  01112224567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHh
Q 032213           80 VRLLCIQDEPNLRPSMKNVILML  102 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L  102 (145)
                      ++.+||..+|.+||++.+++..|
T Consensus       233 li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         233 IMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             HHHHHhcCChhhCcCHHHHHHHh
Confidence            99999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.43  E-value=9.6e-14  Score=93.60  Aligned_cols=103  Identities=23%  Similarity=0.305  Sum_probs=63.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHH-HHHHhHhhhhhCc--chhhcHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYN-CFIAKELNKLVGE--DEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~   77 (145)
                      +|||++.+..++.++|+|+||++++|++++..+....  ............. ......+...+..  ..+.+...+..+
T Consensus       178 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (284)
T cd05081         178 YAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSP--PAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEI  255 (284)
T ss_pred             eCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCc--chhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHH
Confidence            4789888788899999999999999999987654321  1100000000000 0000000011110  111223345678


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      .+++.+||..+|.+|||+.+|+..|+.+
T Consensus       256 ~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         256 YAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             HHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            9999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.42  E-value=2.1e-13  Score=92.97  Aligned_cols=94  Identities=28%  Similarity=0.322  Sum_probs=65.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++|+++ |..|+..... .   .....         ....  .....+......+.+
T Consensus       190 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-~---~~~~~---------~~~~--~~~~~~~~~~~~~~~  254 (303)
T cd05088         190 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-A---ELYEK---------LPQG--YRLEKPLNCDDEVYD  254 (303)
T ss_pred             cCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh-H---HHHHH---------HhcC--CcCCCCCCCCHHHHH
Confidence            57888877778899999999999999998 8888754311 1   11100         0000  011112223456889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEIP  109 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~~  109 (145)
                      ++.+||..+|.+||++.+++..|+.+....
T Consensus       255 li~~~l~~~p~~Rp~~~~il~~l~~~~~~~  284 (303)
T cd05088         255 LMRQCWREKPYERPSFAQILVSLNRMLEER  284 (303)
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence            999999999999999999999988765433

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.42  E-value=4.2e-13  Score=89.16  Aligned_cols=90  Identities=26%  Similarity=0.302  Sum_probs=63.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++....++.++|+||||++++++++ |..|+... ...   .+...         +..  +.....+...+..+.+
T Consensus       166 ~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-~~~---~~~~~---------~~~--~~~~~~~~~~~~~~~~  230 (256)
T cd05039         166 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLK---DVVPH---------VEK--GYRMEAPEGCPPEVYK  230 (256)
T ss_pred             cCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCC-CHH---HHHHH---------Hhc--CCCCCCccCCCHHHHH
Confidence            47998887788899999999999999997 88787543 111   11100         000  0011122233567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      ++.+||..+|.+||++.+++..|+.+
T Consensus       231 li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         231 VMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             HHHHHhccChhhCcCHHHHHHHHhcC
Confidence            99999999999999999999998753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.42  E-value=2.6e-13  Score=93.53  Aligned_cols=84  Identities=15%  Similarity=0.101  Sum_probs=59.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||||++++++++|..||.... .   ....            ..+.......+......+.+|
T Consensus       182 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~-~---~~~~------------~~i~~~~~~~p~~~~~~~~~l  245 (329)
T PTZ00263        182 LAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT-P---FRIY------------EKILAGRLKFPNWFDGRARDL  245 (329)
T ss_pred             cCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC-H---HHHH------------HHHhcCCcCCCCCCCHHHHHH
Confidence            58999988888999999999999999999999986431 1   0110            011111112222234567899


Q ss_pred             HHhcccCCCCCCCC-----HHHHHH
Q 032213           81 RLLCIQDEPNLRPS-----MKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt-----~~~v~~  100 (145)
                      +.+||..||.+|++     +.+++.
T Consensus       246 i~~~L~~dP~~R~~~~~~~~~~ll~  270 (329)
T PTZ00263        246 VKGLLQTDHTKRLGTLKGGVADVKN  270 (329)
T ss_pred             HHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            99999999999987     677764

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.42  E-value=2.7e-13  Score=90.82  Aligned_cols=90  Identities=23%  Similarity=0.352  Sum_probs=62.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||.+....++.++|+||||++++++++ |..|+... ...   .......    .       ......+......+.+
T Consensus       182 ~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~-~~~---~~~~~~~----~-------~~~~~~~~~~~~~~~~  246 (273)
T cd05074         182 LALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGV-ENS---EIYNYLI----K-------GNRLKQPPDCLEDVYE  246 (273)
T ss_pred             cCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCC-CHH---HHHHHHH----c-------CCcCCCCCCCCHHHHH
Confidence            46777777778889999999999999998 77776533 111   1111000    0       0011112233457899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      ++.+||..+|+.||++.+++..|+.+
T Consensus       247 l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         247 LMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            99999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.41  E-value=2.8e-13  Score=93.91  Aligned_cols=93  Identities=27%  Similarity=0.350  Sum_probs=63.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+|+||++++++++ |..|+............            +...  .....+......+.+
T Consensus       248 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~------------~~~~--~~~~~~~~~~~~~~~  313 (343)
T cd05103         248 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR------------LKEG--TRMRAPDYTTPEMYQ  313 (343)
T ss_pred             ECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHH------------Hhcc--CCCCCCCCCCHHHHH
Confidence            47898888888999999999999999986 77777533111110000            0000  001111112346889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++.+||+.+|.+||++.+++..|+.+.+
T Consensus       314 ~~~~cl~~~p~~Rps~~eil~~l~~~~~  341 (343)
T cd05103         314 TMLDCWHGEPSQRPTFSELVEHLGNLLQ  341 (343)
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            9999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.41  E-value=3.8e-13  Score=89.59  Aligned_cols=87  Identities=15%  Similarity=0.162  Sum_probs=61.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..|+...... ..  .. ..   ..       .......+......+.++
T Consensus       174 ~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~--~~-~~---~~-------~~~~~~~~~~~~~~~~~l  239 (263)
T cd06625         174 MSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM-AA--IF-KI---AT-------QPTNPQLPSHVSPDARNF  239 (263)
T ss_pred             cCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH-HH--HH-HH---hc-------cCCCCCCCccCCHHHHHH
Confidence            5899998888899999999999999999999998643111 00  00 00   00       000112233345568899


Q ss_pred             HHhcccCCCCCCCCHHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      +.+||..+|.+||++.+++..
T Consensus       240 i~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         240 LRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             HHHHhhcCcccCCCHHHHhhC
Confidence            999999999999999999753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.41  E-value=5.4e-14  Score=99.62  Aligned_cols=96  Identities=25%  Similarity=0.387  Sum_probs=69.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||.+..+.|+.++|||+|||++||+.+ |..||.....    .....++.    ..      .-+...+...+..+..
T Consensus       329 LAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~----~~v~~kI~----~~------~~r~~~~~~~p~~~~~  394 (474)
T KOG0194|consen  329 LAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKN----YEVKAKIV----KN------GYRMPIPSKTPKELAK  394 (474)
T ss_pred             cChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCH----HHHHHHHH----hc------CccCCCCCCCHHHHHH
Confidence            68999998999999999999999999987 6667764311    11111110    00      1112233355677888


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEIPV  110 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~~~  110 (145)
                      ++..||..+|.+||+|.++...|+.+.....
T Consensus       395 ~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~  425 (474)
T KOG0194|consen  395 VMKQCWKKDPEDRPTMSTIKKKLEALEKKKE  425 (474)
T ss_pred             HHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence            9999999999999999999999998776544

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.41  E-value=1.2e-13  Score=92.88  Aligned_cols=103  Identities=24%  Similarity=0.372  Sum_probs=64.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhh--CcchhhcHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLV--GEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~   78 (145)
                      ++||++.+..++.++|+|+||++++|+++|..|+.....  ....+............+...+  ......+...+..+.
T Consensus       179 ~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (284)
T cd05038         179 YAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPA--EFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVY  256 (284)
T ss_pred             cCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccc--hhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHH
Confidence            468888777888899999999999999999988653211  1000000000000000000000  011112233346789


Q ss_pred             HHHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           79 RVRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      +++.+||..+|.+||++.+|+..|+.+
T Consensus       257 ~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         257 DLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             HHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.41  E-value=5.2e-13  Score=90.62  Aligned_cols=95  Identities=19%  Similarity=0.240  Sum_probs=60.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh--CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC--CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (145)
                      +|||++..+.++.++|+||||++++++++  +..|+... ...   .............. ....   ...+...+..+.
T Consensus       198 ~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~-~~~---~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~l~  269 (295)
T cd05097         198 MAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLL-SDE---QVIENTGEFFRNQG-RQIY---LSQTPLCPSPVF  269 (295)
T ss_pred             cChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCccc-ChH---HHHHHHHHhhhhcc-cccc---CCCCCCCCHHHH
Confidence            57888887888999999999999999987  44555432 111   11111111000000 0000   011112345789


Q ss_pred             HHHHhcccCCCCCCCCHHHHHHHhh
Q 032213           79 RVRLLCIQDEPNLRPSMKNVILMLE  103 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~~L~  103 (145)
                      +++.+||..+|.+||++.+|++.|.
T Consensus       270 ~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         270 KLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HHHHHHcCCCchhCcCHHHHHHHHh
Confidence            9999999999999999999998876

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.41  E-value=5.2e-13  Score=88.58  Aligned_cols=86  Identities=23%  Similarity=0.297  Sum_probs=60.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||+..+..++.++|+|+||++++++++|..|+....    ........        ..   ......+......+.++
T Consensus       168 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~~--------~~---~~~~~~~~~~~~~~~~~  232 (256)
T cd08529         168 LSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN----QGALILKI--------IR---GVFPPVSQMYSQQLAQL  232 (256)
T ss_pred             cCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC----HHHHHHHH--------Hc---CCCCCCccccCHHHHHH
Confidence            47898888788899999999999999999999986431    11111000        00   00011222345668999


Q ss_pred             HHhcccCCCCCCCCHHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      +.+||+.+|.+||++.++++.
T Consensus       233 i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         233 IDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             HHHHccCCcccCcCHHHHhhC
Confidence            999999999999999999763

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.41  E-value=2.9e-13  Score=89.89  Aligned_cols=87  Identities=23%  Similarity=0.329  Sum_probs=60.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.++.++.++|+|++|++++|+++ |..|+....    ...+....   .  ... ...     .+...+..+.+
T Consensus       168 ~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~----~~~~~~~~---~--~~~-~~~-----~~~~~~~~~~~  232 (256)
T cd05112         168 SSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRS----NSEVVETI---N--AGF-RLY-----KPRLASQSVYE  232 (256)
T ss_pred             cCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCC----HHHHHHHH---h--CCC-CCC-----CCCCCCHHHHH
Confidence            47898887888899999999999999998 888875331    11111110   0  000 000     11123456899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHh
Q 032213           80 VRLLCIQDEPNLRPSMKNVILML  102 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L  102 (145)
                      ++.+||..+|++||++.++++.|
T Consensus       233 l~~~~l~~~p~~Rp~~~~~l~~l  255 (256)
T cd05112         233 LMQHCWKERPEDRPSFSLLLHQL  255 (256)
T ss_pred             HHHHHcccChhhCCCHHHHHHhh
Confidence            99999999999999999999876

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.41  E-value=2.9e-13  Score=91.53  Aligned_cols=88  Identities=18%  Similarity=0.246  Sum_probs=61.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++|+||+|++++++++|..||...........+..            .+.......+......+.+|
T Consensus       168 ~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~------------~~~~~~~~~~~~~s~~~~~l  235 (285)
T cd05631         168 MAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDR------------RVKEDQEEYSEKFSEDAKSI  235 (285)
T ss_pred             cCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHH------------HhhcccccCCccCCHHHHHH
Confidence            689999888899999999999999999999999875421111111100            01111112233345678899


Q ss_pred             HHhcccCCCCCCCC-----HHHHHH
Q 032213           81 RLLCIQDEPNLRPS-----MKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt-----~~~v~~  100 (145)
                      +.+||..+|.+|++     +.+++.
T Consensus       236 i~~~l~~~P~~R~~~~~~~~~~~~~  260 (285)
T cd05631         236 CRMLLTKNPKERLGCRGNGAAGVKQ  260 (285)
T ss_pred             HHHHhhcCHHHhcCCCCCCHHHHhc
Confidence            99999999999997     777765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.41  E-value=5.4e-13  Score=88.93  Aligned_cols=89  Identities=28%  Similarity=0.428  Sum_probs=62.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||++....++.++|+|+||++++++++ |..|+... ...   .+.....     .      +...+.+...+..+.+
T Consensus       170 ~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~-~~~---~~~~~~~-----~------~~~~~~~~~~~~~~~~  234 (260)
T cd05073         170 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM-SNP---EVIRALE-----R------GYRMPRPENCPEELYN  234 (260)
T ss_pred             cCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCC-CHH---HHHHHHh-----C------CCCCCCcccCCHHHHH
Confidence            47898887778889999999999999998 78787533 111   1111000     0      0011122234567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEG  104 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~  104 (145)
                      ++.+||+.+|.+||++.++...|+.
T Consensus       235 ~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         235 IMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             HHHHHcccCcccCcCHHHHHHHHhc
Confidence            9999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.41  E-value=2.4e-13  Score=90.22  Aligned_cols=87  Identities=15%  Similarity=0.217  Sum_probs=60.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ++||++.+..++.++|+|+||++++++++|..|+..... ......            ...........+......+.++
T Consensus       166 ~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~-~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~  232 (256)
T cd06612         166 MAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHP-MRAIFM------------IPNKPPPTLSDPEKWSPEFNDF  232 (256)
T ss_pred             cCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcch-hhhhhh------------hccCCCCCCCchhhcCHHHHHH
Confidence            578988888888999999999999999999998864311 110000            0000011112223334568999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||+.+|.+||++.+++.
T Consensus       233 i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         233 VKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             HHHHHhcChhhCcCHHHHhc
Confidence            99999999999999999875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.41  E-value=2.1e-13  Score=92.21  Aligned_cols=99  Identities=13%  Similarity=0.090  Sum_probs=61.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhh-------hhhCcch-----h
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN-------KLVGEDE-----E   68 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-----~   68 (145)
                      +|||++.+..++.++|+||||++++|+++|..||...........+..... ......+.       ..+....     .
T Consensus       176 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (290)
T cd07862         176 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG-LPGEEDWPRDVALPRQAFHSKSAQPIEK  254 (290)
T ss_pred             cChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhC-CCChhhchhhhcccchhccCCCCCCHHH
Confidence            589998888889999999999999999999998875422111111111100 00000000       0011100     1


Q ss_pred             hcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           69 VDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        69 ~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ..+.....+.+++.+||+.+|.+||++.+++.
T Consensus       255 ~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         255 FVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             HccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence            11123456789999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.41  E-value=2.4e-13  Score=90.93  Aligned_cols=89  Identities=20%  Similarity=0.282  Sum_probs=61.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ++||++.+..++.++|+||||++++++++|..|+......    ......    .....    .+  .........+.++
T Consensus       180 ~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~----~~~~~~----~~~~~----~~--~~~~~~~~~l~~l  245 (269)
T cd08528         180 SCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML----SLATKI----VEAVY----EP--LPEGMYSEDVTDV  245 (269)
T ss_pred             cChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH----HHHHHH----hhccC----Cc--CCcccCCHHHHHH
Confidence            4789888888899999999999999999999987643111    010000    00000    00  0011224568899


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhh
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLE  103 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~  103 (145)
                      +.+||+.+|.+||++.++...++
T Consensus       246 i~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         246 ITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             HHHHCCCCCccCCCHHHHHHHhc
Confidence            99999999999999999988775

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.40  E-value=3.9e-13  Score=92.77  Aligned_cols=92  Identities=25%  Similarity=0.358  Sum_probs=65.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+|+||++++|+++ |..|+... ....   +....   .  .      ......+......+.+
T Consensus       203 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-~~~~---~~~~~---~--~------~~~~~~~~~~~~~l~~  267 (334)
T cd05100         203 MAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI-PVEE---LFKLL---K--E------GHRMDKPANCTHELYM  267 (334)
T ss_pred             cCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCC-CHHH---HHHHH---H--c------CCCCCCCCCCCHHHHH
Confidence            58998888888999999999999999998 67776533 1111   11000   0  0      0011122233557889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++.+||+.+|.+||++.+++..|..+..
T Consensus       268 li~~cl~~~p~~Rps~~ell~~l~~~~~  295 (334)
T cd05100         268 IMRECWHAVPSQRPTFKQLVEDLDRVLT  295 (334)
T ss_pred             HHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence            9999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.40  E-value=2e-13  Score=92.11  Aligned_cols=103  Identities=19%  Similarity=0.212  Sum_probs=62.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHH-HHHHHHHhHhhhhh-CcchhhcHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTW-VYNCFIAKELNKLV-GEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   78 (145)
                      +|||++.+..++.++|+||||++++++++++.+....  .......... ............+. ....+.+...+..+.
T Consensus       179 ~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (284)
T cd05079         179 YAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSP--MTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVY  256 (284)
T ss_pred             cCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccc--cchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHH
Confidence            4788887777889999999999999999977653211  0000000000 00000000000000 011112223456789


Q ss_pred             HHHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           79 RVRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      +|+.+||+.+|.+||++.+++..|+.+
T Consensus       257 ~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         257 QLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             HHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.40  E-value=8.3e-13  Score=91.10  Aligned_cols=36  Identities=33%  Similarity=0.495  Sum_probs=33.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCC
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEV   36 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~   36 (145)
                      +|||++.+..++.++|+||||++++|+++|+.|+..
T Consensus       169 ~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~  204 (331)
T cd06649         169 MSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP  204 (331)
T ss_pred             CCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence            589999888899999999999999999999999864

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.40  E-value=1.3e-13  Score=94.30  Aligned_cols=83  Identities=16%  Similarity=0.139  Sum_probs=58.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..||.... .   ....            ..+.......+......+.++
T Consensus       160 ~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~-~---~~~~------------~~~~~~~~~~~~~~~~~~~~l  223 (312)
T cd05585         160 LAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN-V---NEMY------------RKILQEPLRFPDGFDRDAKDL  223 (312)
T ss_pred             CCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC-H---HHHH------------HHHHcCCCCCCCcCCHHHHHH
Confidence            68999988889999999999999999999999986431 1   1110            111111122233445678899


Q ss_pred             HHhcccCCCCCCCC---HHHHH
Q 032213           81 RLLCIQDEPNLRPS---MKNVI   99 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt---~~~v~   99 (145)
                      +.+||..+|.+||+   +.+++
T Consensus       224 i~~~L~~dp~~R~~~~~~~e~l  245 (312)
T cd05585         224 LIGLLSRDPTRRLGYNGAQEIK  245 (312)
T ss_pred             HHHHcCCCHHHcCCCCCHHHHH
Confidence            99999999999986   45554

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.39  E-value=3.7e-13  Score=97.44  Aligned_cols=85  Identities=20%  Similarity=0.332  Sum_probs=61.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++||||||++++|+++|..||... .   ...+...        ..   .....+.+...+..+.++
T Consensus       212 ~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~-~---~~~~~~~--------~~---~~~~~~~~~~~~~~l~~l  276 (496)
T PTZ00283        212 VAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE-N---MEEVMHK--------TL---AGRYDPLPPSISPEMQEI  276 (496)
T ss_pred             eCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC-C---HHHHHHH--------Hh---cCCCCCCCCCCCHHHHHH
Confidence            5899998888999999999999999999999998643 1   1111100        00   000111233345678999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.+++.
T Consensus       277 i~~~L~~dP~~RPs~~ell~  296 (496)
T PTZ00283        277 VTALLSSDPKRRPSSSKLLN  296 (496)
T ss_pred             HHHHcccChhhCcCHHHHHh
Confidence            99999999999999999975

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.39  E-value=5.7e-13  Score=89.12  Aligned_cols=90  Identities=20%  Similarity=0.311  Sum_probs=63.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||++.+..++.++|+|+||++++++++ |..|+.... ...   .....         ....  ..+.+...+..+.+
T Consensus       176 ~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~-~~~---~~~~~---------~~~~--~~~~~~~~~~~~~~  240 (267)
T cd05066         176 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMS-NQD---VIKAI---------EEGY--RLPAPMDCPAALHQ  240 (267)
T ss_pred             cCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCC-HHH---HHHHH---------hCCC--cCCCCCCCCHHHHH
Confidence            57898887788999999999999999886 888876431 111   11110         0000  01112233556889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      ++.+||+.+|.+||++.++++.|.++
T Consensus       241 li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         241 LMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             HHHHHcccCchhCCCHHHHHHHHHhh
Confidence            99999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.39  E-value=1.1e-12  Score=88.26  Aligned_cols=86  Identities=19%  Similarity=0.328  Sum_probs=61.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||||++++++++|..|+...... .....            ...  ......+...+..+.++
T Consensus       168 ~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-~~~~~------------~~~--~~~~~~~~~~~~~~~~l  232 (277)
T cd06640         168 MAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM-RVLFL------------IPK--NNPPTLTGEFSKPFKEF  232 (277)
T ss_pred             cCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH-hHhhh------------hhc--CCCCCCchhhhHHHHHH
Confidence            4789888778899999999999999999999988643111 00000            000  00112233456678999


Q ss_pred             HHhcccCCCCCCCCHHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      +.+||..+|.+||++.+++..
T Consensus       233 i~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         233 IDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHcccCcccCcCHHHHHhC
Confidence            999999999999999999754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.39  E-value=2.4e-13  Score=93.32  Aligned_cols=84  Identities=15%  Similarity=0.178  Sum_probs=60.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+||+++++++|..||.... .   ..+..            .+.......+......+.++
T Consensus       163 ~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~-~---~~~~~------------~i~~~~~~~~~~~~~~~~~l  226 (318)
T cd05570         163 IAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD-E---DELFQ------------SILEDEVRYPRWLSKEAKSI  226 (318)
T ss_pred             cCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC-H---HHHHH------------HHHcCCCCCCCcCCHHHHHH
Confidence            58999988889999999999999999999999986431 1   11110            01111111223345668999


Q ss_pred             HHhcccCCCCCCCCH-----HHHHH
Q 032213           81 RLLCIQDEPNLRPSM-----KNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~-----~~v~~  100 (145)
                      +.+||..+|.+||++     .+++.
T Consensus       227 i~~~l~~dP~~R~s~~~~~~~~ll~  251 (318)
T cd05570         227 LKSFLTKNPEKRLGCLPTGEQDIKG  251 (318)
T ss_pred             HHHHccCCHHHcCCCCCCCHHHHhc
Confidence            999999999999999     77764

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.39  E-value=5.7e-13  Score=88.49  Aligned_cols=85  Identities=22%  Similarity=0.277  Sum_probs=60.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+|+||++++++++|..|+.....    ......        .   +.......+......+.++
T Consensus       168 ~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~----~~~~~~--------~---~~~~~~~~~~~~~~~~~~l  232 (256)
T cd08218         168 LSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM----KNLVLK--------I---IRGSYPPVSSHYSYDLRNL  232 (256)
T ss_pred             cCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH----HHHHHH--------H---hcCCCCCCcccCCHHHHHH
Confidence            478888888888999999999999999999998764311    111000        0   0011112233345668999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||+.+|.+||++.+|+.
T Consensus       233 i~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         233 VSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             HHHHhhCChhhCcCHHHHhh
Confidence            99999999999999999976

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.38  E-value=5.8e-13  Score=89.61  Aligned_cols=93  Identities=22%  Similarity=0.210  Sum_probs=65.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||.+....++.++|+|+||++++|+++ |..|+.... ..   .+.....    .       ......+......+.+
T Consensus       178 ~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-~~---~~~~~~~----~-------~~~~~~~~~~~~~~~~  242 (279)
T cd05057         178 MALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIP-AV---EIPDLLE----K-------GERLPQPPICTIDVYM  242 (279)
T ss_pred             cCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCC-HH---HHHHHHh----C-------CCCCCCCCCCCHHHHH
Confidence            57888877788899999999999999998 888876431 11   1111000    0       0011112223456789


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      ++.+||..+|..||++.+++..|..+...
T Consensus       243 ~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~  271 (279)
T cd05057         243 VLVKCWMIDAESRPTFKELINEFSKMARD  271 (279)
T ss_pred             HHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence            99999999999999999999999987553

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.38  E-value=8.2e-14  Score=94.45  Aligned_cols=89  Identities=17%  Similarity=0.238  Sum_probs=61.4

Q ss_pred             CCCcccccCC-cccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGL-ITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~-~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++..+. ....+|+||+||+++||++|+.|+.......      .+.......       +..+..|...+....+
T Consensus       188 maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~------~~~~~ig~~-------~~~P~ip~~ls~~a~~  254 (313)
T KOG0198|consen  188 MAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEA------EALLLIGRE-------DSLPEIPDSLSDEAKD  254 (313)
T ss_pred             cCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchH------HHHHHHhcc-------CCCCCCCcccCHHHHH
Confidence            7999998543 3348999999999999999999986420111      110000000       0011344456677899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHh
Q 032213           80 VRLLCIQDEPNLRPSMKNVILML  102 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L  102 (145)
                      ++.+|+..+|.+|||+.+++...
T Consensus       255 Fl~~C~~~~p~~Rpta~eLL~hp  277 (313)
T KOG0198|consen  255 FLRKCFKRDPEKRPTAEELLEHP  277 (313)
T ss_pred             HHHHHhhcCcccCcCHHHHhhCh
Confidence            99999999999999999998753

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.38  E-value=5.4e-13  Score=89.34  Aligned_cols=86  Identities=15%  Similarity=0.219  Sum_probs=57.1

Q ss_pred             CCCcccc-----cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHH
Q 032213            1 MSPEWQN-----SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLE   75 (145)
Q Consensus         1 ~aPe~~~-----~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (145)
                      +|||++.     ...++.++|+||||++++|+++|..|+......... ..            ....... .......+.
T Consensus       178 ~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~-~~------------~~~~~~~-~~~~~~~~~  243 (272)
T cd06637         178 MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL-FL------------IPRNPAP-RLKSKKWSK  243 (272)
T ss_pred             cCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHH-HH------------HhcCCCC-CCCCCCcCH
Confidence            4788875     335778999999999999999999988643111000 00            0000000 011122345


Q ss_pred             HHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           76 TMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        76 ~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+.+|+.+||..+|.+||++.+++.
T Consensus       244 ~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         244 KFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHhh
Confidence            6899999999999999999999865

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.38  E-value=9e-13  Score=87.46  Aligned_cols=88  Identities=32%  Similarity=0.443  Sum_probs=62.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||.+....++.++|+|++|++++++++ |..|+... ..   ..+...         +..  ......+...+..+.+
T Consensus       174 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-~~---~~~~~~---------~~~--~~~~~~~~~~~~~~~~  238 (262)
T cd00192         174 MAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGL-SN---EEVLEY---------LRK--GYRLPKPEYCPDELYE  238 (262)
T ss_pred             cCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCC-CH---HHHHHH---------HHc--CCCCCCCccCChHHHH
Confidence            57898887788999999999999999998 57777643 11   111111         000  1111223344667899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhh
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLE  103 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~  103 (145)
                      ++.+||..+|.+||++.+++..|+
T Consensus       239 li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         239 LMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             HHHHHccCCcccCcCHHHHHHhhC
Confidence            999999999999999999988764

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.38  E-value=7.9e-13  Score=87.80  Aligned_cols=89  Identities=27%  Similarity=0.321  Sum_probs=62.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||++.+..++.++|+|+||++++++++ |..|+... ...   ......     ...      .....+...+..+.+
T Consensus       164 ~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~-~~~---~~~~~~-----~~~------~~~~~~~~~~~~~~~  228 (254)
T cd05083         164 TAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKM-SLK---EVKECV-----EKG------YRMEPPEGCPADVYV  228 (254)
T ss_pred             cCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccC-CHH---HHHHHH-----hCC------CCCCCCCcCCHHHHH
Confidence            47888887888999999999999999997 88777543 111   111100     000      011112233567889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEG  104 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~  104 (145)
                      ++.+||..+|..||++.+++..|+.
T Consensus       229 li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         229 LMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHcc
Confidence            9999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.38  E-value=7.2e-13  Score=91.97  Aligned_cols=94  Identities=23%  Similarity=0.313  Sum_probs=62.1

Q ss_pred             CCCcccc--cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHH
Q 032213            1 MSPEWQN--SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~--~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (145)
                      ||||++.  ...|+.|+|||||||..+|+.+|..||...  +..+..+..    +.....................+.++
T Consensus       197 mAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~--pPmkvLl~t----Lqn~pp~~~t~~~~~d~~k~~~ksf~  270 (516)
T KOG0582|consen  197 MAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKY--PPMKVLLLT----LQNDPPTLLTSGLDKDEDKKFSKSFR  270 (516)
T ss_pred             cChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccC--ChHHHHHHH----hcCCCCCcccccCChHHhhhhcHHHH
Confidence            7999965  345899999999999999999999999865  222211111    00000000000000112223456899


Q ss_pred             HHHHhcccCCCCCCCCHHHHHH
Q 032213           79 RVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +++..|++.||.+|||+++++.
T Consensus       271 e~i~~CL~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  271 EMIALCLVKDPSKRPTASKLLK  292 (516)
T ss_pred             HHHHHHhhcCcccCCCHHHHhc
Confidence            9999999999999999999985

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.38  E-value=3.2e-13  Score=89.71  Aligned_cols=86  Identities=21%  Similarity=0.274  Sum_probs=60.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+|+||++++++++|..|+... ...   ....   ... .       ......+......+.++
T Consensus       167 ~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~-~~~---~~~~---~~~-~-------~~~~~~~~~~~~~~~~l  231 (255)
T cd08219         167 VPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQAN-SWK---NLIL---KVC-Q-------GSYKPLPSHYSYELRSL  231 (255)
T ss_pred             cCHHHHccCCcCchhhhhhhchhheehhhccCCCCCC-CHH---HHHH---HHh-c-------CCCCCCCcccCHHHHHH
Confidence            5789888778889999999999999999999998643 110   0000   000 0       00011223334568899


Q ss_pred             HHhcccCCCCCCCCHHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      +.+||..+|.+||++.+++..
T Consensus       232 i~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         232 IKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HHHHHhCCcccCCCHHHHhhc
Confidence            999999999999999999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.38  E-value=8.3e-13  Score=87.93  Aligned_cols=89  Identities=28%  Similarity=0.394  Sum_probs=62.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||.+.+..++.++|+||+|++++++++ |..|+... ...   .....         +...  .....+...+..+.+
T Consensus       171 ~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~-~~~---~~~~~---------~~~~--~~~~~~~~~~~~~~~  235 (261)
T cd05034         171 TAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGM-TNR---EVLEQ---------VERG--YRMPRPPNCPEELYD  235 (261)
T ss_pred             cCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCC-CHH---HHHHH---------HHcC--CCCCCCCCCCHHHHH
Confidence            47888887788899999999999999998 88887533 111   11110         0000  011112223556899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEG  104 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~  104 (145)
                      ++.+||..+|.+||++.++...|+.
T Consensus       236 ~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         236 LMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             HHHHHcccCcccCCCHHHHHHHHhc
Confidence            9999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.38  E-value=7.7e-13  Score=88.45  Aligned_cols=85  Identities=21%  Similarity=0.268  Sum_probs=56.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+|++|++++|+++|..|+...........             .. ........+......+..+
T Consensus       176 ~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~-------------~~-~~~~~~~~~~~~~~~~~~l  241 (266)
T cd06651         176 MSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFK-------------IA-TQPTNPQLPSHISEHARDF  241 (266)
T ss_pred             cCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHH-------------Hh-cCCCCCCCchhcCHHHHHH
Confidence            478988877888999999999999999999999864311100000             00 0001112233334455666


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      + +||..+|.+||++.+|+.
T Consensus       242 i-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         242 L-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             H-HHhcCChhhCcCHHHHhc
Confidence            6 688889999999999964

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.38  E-value=8.3e-13  Score=89.77  Aligned_cols=87  Identities=16%  Similarity=0.189  Sum_probs=60.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ++||.+.+..++.++|+|+||++++++++|..|+...... ......      . ..     ..+....+......+.++
T Consensus       182 ~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~-~~~~~~------~-~~-----~~~~~~~~~~~~~~~~~l  248 (296)
T cd06655         182 MAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL-RALYLI------A-TN-----GTPELQNPEKLSPIFRDF  248 (296)
T ss_pred             cCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHH------H-hc-----CCcccCCcccCCHHHHHH
Confidence            5799888888899999999999999999999998643111 110000      0 00     000111223344568899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.+++.
T Consensus       249 i~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         249 LNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             HHHHhhcChhhCCCHHHHhh
Confidence            99999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.38  E-value=7.6e-13  Score=89.53  Aligned_cols=90  Identities=26%  Similarity=0.459  Sum_probs=63.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCc-chhhcHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGE-DEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   78 (145)
                      ++||++.+..++.++|+||||++++|+++ |..|+... ....   ....            +... ....+......+.
T Consensus       188 ~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~-~~~~---~~~~------------~~~~~~~~~~~~~~~~~~  251 (288)
T cd05061         188 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL-SNEQ---VLKF------------VMDGGYLDQPDNCPERVT  251 (288)
T ss_pred             cCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCC-CHHH---HHHH------------HHcCCCCCCCCCCCHHHH
Confidence            57888887888999999999999999998 66676532 1111   1110            0100 0111223346799


Q ss_pred             HHHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           79 RVRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      +++.+||+.+|.+||++.++++.|.+..
T Consensus       252 ~li~~~l~~~p~~Rps~~~ll~~l~~~~  279 (288)
T cd05061         252 DLMRMCWQFNPKMRPTFLEIVNLLKDDL  279 (288)
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence            9999999999999999999999888754

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.38  E-value=2.6e-13  Score=93.34  Aligned_cols=84  Identities=18%  Similarity=0.232  Sum_probs=61.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+||+++|+++|..|+... ..   ..+...            +.......+......+.++
T Consensus       162 ~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~-~~---~~~~~~------------~~~~~~~~p~~~~~~~~~l  225 (323)
T cd05571         162 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-DH---EKLFEL------------ILMEEIRFPRTLSPEAKSL  225 (323)
T ss_pred             cChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCC-CH---HHHHHH------------HHcCCCCCCCCCCHHHHHH
Confidence            6899998888999999999999999999999998643 11   111110            1111112233345678899


Q ss_pred             HHhcccCCCCCCC-----CHHHHHH
Q 032213           81 RLLCIQDEPNLRP-----SMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rp-----t~~~v~~  100 (145)
                      +.+||..||.+||     ++.+++.
T Consensus       226 i~~~L~~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         226 LAGLLKKDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             HHHHccCCHHHcCCCCCCCHHHHHc
Confidence            9999999999999     7888874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.37  E-value=1e-12  Score=90.59  Aligned_cols=98  Identities=18%  Similarity=0.193  Sum_probs=59.0

Q ss_pred             CCCccccc--CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHH------------HHHHHHhHhhhhhCcc
Q 032213            1 MSPEWQNS--GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWV------------YNCFIAKELNKLVGED   66 (145)
Q Consensus         1 ~aPe~~~~--~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~   66 (145)
                      +|||++.+  ..++.++|+||||++++++++|+.||...... .........            ........+..+. ..
T Consensus       173 ~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~  250 (338)
T cd07859         173 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV-HQLDLITDLLGTPSPETISRVRNEKARRYLSSMR-KK  250 (338)
T ss_pred             CCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhc-cc
Confidence            58898764  57888999999999999999999988643111 111100000            0000000000000 00


Q ss_pred             hhhc-----HHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           67 EEVD-----LRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        67 ~~~~-----~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+.+     ......+.+++.+||..+|.+||++.+++.
T Consensus       251 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~  289 (338)
T cd07859         251 QPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA  289 (338)
T ss_pred             CCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence            0000     112345789999999999999999999986

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.37  E-value=1e-12  Score=87.15  Aligned_cols=85  Identities=22%  Similarity=0.362  Sum_probs=59.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||||++++++++|..|+.....    .......        ..   ......+......+.++
T Consensus       168 ~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~----~~~~~~~--------~~---~~~~~~~~~~~~~l~~l  232 (256)
T cd08220         168 ISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL----PALVLKI--------MS---GTFAPISDRYSPDLRQL  232 (256)
T ss_pred             cCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch----HHHHHHH--------Hh---cCCCCCCCCcCHHHHHH
Confidence            579988877788999999999999999999988764311    1111100        00   00001122235568899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.+++.
T Consensus       233 i~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         233 ILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             HHHHccCChhhCCCHHHHhh
Confidence            99999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.37  E-value=1e-12  Score=89.28  Aligned_cols=87  Identities=15%  Similarity=0.163  Sum_probs=60.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+|+||++++++++|..||..... ..  .+...    . ..     ..+....+......+.++
T Consensus       183 ~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~-~~--~~~~~----~-~~-----~~~~~~~~~~~~~~l~~l  249 (296)
T cd06654         183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-LR--ALYLI----A-TN-----GTPELQNPEKLSAIFRDF  249 (296)
T ss_pred             cCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCH-HH--hHHHH----h-cC-----CCCCCCCccccCHHHHHH
Confidence            478988877788999999999999999999999864311 11  01000    0 00     001111233345568899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|..||++.+++.
T Consensus       250 i~~~l~~~p~~Rpt~~eil~  269 (296)
T cd06654         250 LNRCLDMDVEKRGSAKELLQ  269 (296)
T ss_pred             HHHHCcCCcccCcCHHHHhh
Confidence            99999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.37  E-value=1.8e-12  Score=86.28  Aligned_cols=89  Identities=13%  Similarity=0.197  Sum_probs=59.8

Q ss_pred             CCCcccccC---CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHH
Q 032213            1 MSPEWQNSG---LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~~~---~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (145)
                      ++||.+...   .++.++|+|+||++++++++|..|+...... ......       ....   ........+...+..+
T Consensus       168 ~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~-~~~~~~-------~~~~---~~~~~~~~~~~~~~~~  236 (262)
T cd06613         168 MAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPM-RALFLI-------SKSN---FPPPKLKDKEKWSPVF  236 (262)
T ss_pred             cCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHH-------Hhcc---CCCccccchhhhhHHH
Confidence            578888665   7888999999999999999999998643111 110000       0000   0011111223345668


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHH
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+++.+||..+|..||++.+++.
T Consensus       237 ~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         237 HDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             HHHHHHHcCCChhhCCCHHHHhc
Confidence            99999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.36  E-value=5.6e-13  Score=98.63  Aligned_cols=96  Identities=20%  Similarity=0.189  Sum_probs=72.2

Q ss_pred             CCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            2 SPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         2 aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      |-|.++...|++++|||+|||.+||++| |..|+... +..+...+.+              ...++..|+-+...+..+
T Consensus       868 ale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi-~~~eI~dlle--------------~geRLsqPpiCtiDVy~~  932 (1177)
T KOG1025|consen  868 ALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGI-PAEEIPDLLE--------------KGERLSQPPICTIDVYMV  932 (1177)
T ss_pred             HHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCC-CHHHhhHHHh--------------ccccCCCCCCccHHHHHH
Confidence            4455666789999999999999999875 67787654 2222222211              233467788889999999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhccCCCCCCC
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEGTMEIPVVP  112 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~~~~~~~~~  112 (145)
                      +.+||..|+..||+|+++...+.++...++.-
T Consensus       933 mvkCwmid~~~rp~fkel~~~fs~~ardpqry  964 (1177)
T KOG1025|consen  933 MVKCWMIDADSRPTFKELAEEFSRMARDPQRY  964 (1177)
T ss_pred             HHHHhccCcccCccHHHHHHHHHHHhcCcceE
Confidence            99999999999999999999888877655433

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.36  E-value=1.3e-12  Score=87.31  Aligned_cols=85  Identities=16%  Similarity=0.267  Sum_probs=60.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+|++|++++++++|..|+.....   .....          .....  .....+......+.++
T Consensus       179 ~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~----------~~~~~--~~~~~~~~~~~~~~~l  243 (267)
T cd06628         179 MAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ---LQAIF----------KIGEN--ASPEIPSNISSEAIDF  243 (267)
T ss_pred             cChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH---HHHHH----------HHhcc--CCCcCCcccCHHHHHH
Confidence            478888777788899999999999999999999864311   00000          00000  1112233345678899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||+.+|.+||++.+++.
T Consensus       244 i~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         244 LEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             HHHHccCCchhCcCHHHHhh
Confidence            99999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.36  E-value=5.4e-13  Score=90.45  Aligned_cols=84  Identities=13%  Similarity=0.069  Sum_probs=60.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..|+.....    .....            .+.......+......+.++
T Consensus       165 ~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~----~~~~~------------~i~~~~~~~~~~~~~~~~~l  228 (291)
T cd05612         165 LAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP----FGIYE------------KILAGKLEFPRHLDLYAKDL  228 (291)
T ss_pred             cCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHH------------HHHhCCcCCCccCCHHHHHH
Confidence            589998888889999999999999999999999864311    11110            01111112233335568899


Q ss_pred             HHhcccCCCCCCCC-----HHHHHH
Q 032213           81 RLLCIQDEPNLRPS-----MKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt-----~~~v~~  100 (145)
                      +.+||..||.+|++     +.+++.
T Consensus       229 i~~~l~~dp~~R~~~~~~~~~~~l~  253 (291)
T cd05612         229 IKKLLVVDRTRRLGNMKNGADDVKN  253 (291)
T ss_pred             HHHHcCCCHHHccCCccCCHHHHhc
Confidence            99999999999995     888875

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.36  E-value=2.1e-12  Score=85.33  Aligned_cols=89  Identities=22%  Similarity=0.374  Sum_probs=64.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcH-HHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDL-RTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   79 (145)
                      |+||.+.+..|+.++||||+||+++||+.-..||...    ....+...         +..  +.-++.|. .-+..+..
T Consensus       195 MSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~----n~~~L~~K---------I~q--gd~~~~p~~~YS~~l~~  259 (375)
T KOG0591|consen  195 MSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD----NLLSLCKK---------IEQ--GDYPPLPDEHYSTDLRE  259 (375)
T ss_pred             cCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc----cHHHHHHH---------HHc--CCCCCCcHHHhhhHHHH
Confidence            7899999999999999999999999999999999743    11111111         100  11113442 34667899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEG  104 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~  104 (145)
                      |+..|+..|++.||+...++..+..
T Consensus       260 li~~ci~vd~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  260 LINMCIAVDPEQRPDTVPYVQDIQS  284 (375)
T ss_pred             HHHHHccCCcccCCCcchHHHHHHH
Confidence            9999999999999986555555443

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.36  E-value=1e-12  Score=88.64  Aligned_cols=88  Identities=15%  Similarity=0.231  Sum_probs=61.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||||++++++++|..|+.............            ..+.......+...+..+.++
T Consensus       164 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~l  231 (280)
T cd05608         164 MAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK------------QRILNDSVTYPDKFSPASKSF  231 (280)
T ss_pred             cCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHH------------HhhcccCCCCcccCCHHHHHH
Confidence            58999988889999999999999999999999986431111111110            011111112233445678999


Q ss_pred             HHhcccCCCCCCC-----CHHHHHH
Q 032213           81 RLLCIQDEPNLRP-----SMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rp-----t~~~v~~  100 (145)
                      +.+||..+|.+|+     ++.+++.
T Consensus       232 i~~~l~~~P~~R~~~~~~~~~~~l~  256 (280)
T cd05608         232 CEALLAKDPEKRLGFRDGNCDGLRT  256 (280)
T ss_pred             HHHHhcCCHHHhcCCCCCCHHHHhc
Confidence            9999999999999     6677764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.36  E-value=9.4e-13  Score=88.71  Aligned_cols=86  Identities=15%  Similarity=0.200  Sum_probs=57.3

Q ss_pred             CCCcccc-----cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHH
Q 032213            1 MSPEWQN-----SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLE   75 (145)
Q Consensus         1 ~aPe~~~-----~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (145)
                      +|||++.     ...++.++|+|+||++++++++|..|+...... .....            ........ ......+.
T Consensus       188 ~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~-~~~~~------------~~~~~~~~-~~~~~~~~  253 (282)
T cd06636         188 MAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM-RALFL------------IPRNPPPK-LKSKKWSK  253 (282)
T ss_pred             cCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH-hhhhh------------HhhCCCCC-CcccccCH
Confidence            4788775     345778999999999999999999998643111 10000            00000000 01112345


Q ss_pred             HHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           76 TMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        76 ~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+.+++.+||..+|.+||++.+++.
T Consensus       254 ~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         254 KFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             HHHHHHHHHhCCChhhCcCHHHHhc
Confidence            6899999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.36  E-value=1.2e-12  Score=88.03  Aligned_cols=86  Identities=16%  Similarity=0.269  Sum_probs=60.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ++||++.+..++.++|+|+||++++|+++|..|+.......    ....         +.....+  ......+..+.++
T Consensus       168 ~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~----~~~~---------~~~~~~~--~~~~~~~~~~~~l  232 (277)
T cd06642         168 MAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR----VLFL---------IPKNSPP--TLEGQYSKPFKEF  232 (277)
T ss_pred             cCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh----HHhh---------hhcCCCC--CCCcccCHHHHHH
Confidence            57898887788899999999999999999999876431110    0000         0000000  1122335568899


Q ss_pred             HHhcccCCCCCCCCHHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      +.+||..+|.+||++.+++..
T Consensus       233 i~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         233 VEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             HHHHccCCcccCcCHHHHHHh
Confidence            999999999999999999873

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.36  E-value=9.4e-13  Score=88.74  Aligned_cols=87  Identities=17%  Similarity=0.142  Sum_probs=57.8

Q ss_pred             CCCcccc-----cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHH
Q 032213            1 MSPEWQN-----SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLE   75 (145)
Q Consensus         1 ~aPe~~~-----~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (145)
                      +|||++.     ...++.++|+||||++++++++|..|+........   ....    .      .........+.....
T Consensus       170 ~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~---~~~~----~------~~~~~~~~~~~~~~~  236 (282)
T cd06643         170 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV---LLKI----A------KSEPPTLAQPSRWSS  236 (282)
T ss_pred             cCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH---HHHH----h------hcCCCCCCCccccCH
Confidence            5788873     34467899999999999999999998764311110   0000    0      000111112223355


Q ss_pred             HHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           76 TMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        76 ~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+.+++.+||..+|.+||++.+++.
T Consensus       237 ~~~~li~~~l~~~p~~Rp~~~~il~  261 (282)
T cd06643         237 EFKDFLKKCLEKNVDARWTTTQLLQ  261 (282)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhc
Confidence            7899999999999999999998864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.36  E-value=1.7e-12  Score=86.25  Aligned_cols=85  Identities=22%  Similarity=0.356  Sum_probs=60.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||+..+..++.++|+|++|++++++++|..|+... ....   .   ..... ..       .....+......+.++
T Consensus       169 ~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~-~~~~---~---~~~~~-~~-------~~~~~~~~~~~~~~~l  233 (257)
T cd08223         169 MSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAK-DMNS---L---VYRII-EG-------KLPPMPKDYSPELGEL  233 (257)
T ss_pred             cChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCC-CHHH---H---HHHHH-hc-------CCCCCccccCHHHHHH
Confidence            5899988888889999999999999999999887633 1100   0   00000 00       0011233345678999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.+++.
T Consensus       234 i~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         234 IATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             HHHHhccCcccCCCHHHHhc
Confidence            99999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.36  E-value=9.5e-13  Score=94.99  Aligned_cols=85  Identities=22%  Similarity=0.329  Sum_probs=60.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++|+||+|++++++++|..|+... .   ...+....        .   .....+.+......+.++
T Consensus       238 ~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~-~---~~~~~~~~--------~---~~~~~~~~~~~s~~~~~l  302 (478)
T PTZ00267        238 LAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGP-S---QREIMQQV--------L---YGKYDPFPCPVSSGMKAL  302 (478)
T ss_pred             cCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC-C---HHHHHHHH--------H---hCCCCCCCccCCHHHHHH
Confidence            5899998888999999999999999999999998643 1   11111100        0   001111222345678999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.+++.
T Consensus       303 i~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        303 LDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             HHHHhccChhhCcCHHHHHh
Confidence            99999999999999998864

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.36  E-value=1.4e-12  Score=87.46  Aligned_cols=85  Identities=19%  Similarity=0.260  Sum_probs=59.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHH-HHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLR-TLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   79 (145)
                      ++||++.+..++.++|+|+||++++++++|..|+......    ....         .+.....+.  .+.. .+..+.+
T Consensus       165 ~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~----~~~~---------~~~~~~~~~--~~~~~~~~~~~~  229 (274)
T cd06609         165 MAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM----RVLF---------LIPKNNPPS--LEGNKFSKPFKD  229 (274)
T ss_pred             cChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH----HHHH---------HhhhcCCCC--CcccccCHHHHH
Confidence            5799988888999999999999999999999998643110    0000         000000111  1111 3556889


Q ss_pred             HHHhcccCCCCCCCCHHHHHH
Q 032213           80 VRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ++.+||..+|.+||++.+++.
T Consensus       230 ~l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         230 FVSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             HHHHHhhCChhhCcCHHHHhh
Confidence            999999999999999999976

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.36  E-value=7.7e-13  Score=89.32  Aligned_cols=99  Identities=14%  Similarity=0.085  Sum_probs=61.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhh-------hhCcch-----h
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNK-------LVGEDE-----E   68 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-----~   68 (145)
                      +|||++.+..++.++|+||+|++++++++|..++...........+...... .....+..       ......     .
T Consensus       174 ~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (288)
T cd07863         174 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGL-PPEDDWPRDVTLPRGAFSPRGPRPVQS  252 (288)
T ss_pred             cCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCC-CChhhCcccccccccccCCCCCCchHH
Confidence            5899998888999999999999999999999887643211111111111000 00000000       000000     1


Q ss_pred             hcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           69 VDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        69 ~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ........+.+++.+|++.||.+||++.+++.
T Consensus       253 ~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         253 VVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             hCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            11123456789999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.35  E-value=8.1e-13  Score=90.88  Aligned_cols=84  Identities=15%  Similarity=0.202  Sum_probs=59.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++|+||||++++++++|..|+..... .   ....            .+.......+......+.++
T Consensus       168 ~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~-~---~~~~------------~i~~~~~~~p~~~~~~~~~l  231 (324)
T cd05589         168 LAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE-E---EVFD------------SIVNDEVRYPRFLSREAISI  231 (324)
T ss_pred             cCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH-H---HHHH------------HHHhCCCCCCCCCCHHHHHH
Confidence            689999888899999999999999999999999864311 1   1110            01111111223335567899


Q ss_pred             HHhcccCCCCCCC-----CHHHHHH
Q 032213           81 RLLCIQDEPNLRP-----SMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rp-----t~~~v~~  100 (145)
                      +.+||..+|.+||     ++.+++.
T Consensus       232 i~~~L~~dP~~R~~~~~~~~~~l~~  256 (324)
T cd05589         232 MRRLLRRNPERRLGSGEKDAEDVKK  256 (324)
T ss_pred             HHHHhhcCHhHcCCCCCCCHHHHhh
Confidence            9999999999999     5666654

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.35  E-value=3.2e-12  Score=90.13  Aligned_cols=100  Identities=15%  Similarity=0.131  Sum_probs=60.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCc-------hhhHhHHHHHHHHH------HHhHhh----hhh
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVST-------ADVVLLSTWVYNCF------IAKELN----KLV   63 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~-------~~~~~~~~~~~~~~------~~~~~~----~~~   63 (145)
                      +|||++.+..++.++|+||+|++++|+++|..|+......       .....+........      ....+.    ...
T Consensus       250 ~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~  329 (391)
T PHA03212        250 NAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLA  329 (391)
T ss_pred             CChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHH
Confidence            5899998888999999999999999999999876532110       00001110000000      000000    000


Q ss_pred             -----Cc--c--hhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           64 -----GE--D--EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        64 -----~~--~--~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                           .+  +  .......+..+.+|+.+||..||.+|||+.+++.
T Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~  375 (391)
T PHA03212        330 KKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD  375 (391)
T ss_pred             hccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence                 00  0  0111123557889999999999999999999986

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.35  E-value=6.6e-13  Score=91.34  Aligned_cols=84  Identities=19%  Similarity=0.229  Sum_probs=60.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||||++++|+++|..|+..... ..   ...            .+.......+......+.++
T Consensus       162 ~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~-~~---~~~------------~~~~~~~~~p~~~~~~~~~l  225 (323)
T cd05595         162 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ER---LFE------------LILMEEIRFPRTLSPEAKSL  225 (323)
T ss_pred             CCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH-HH---HHH------------HHhcCCCCCCCCCCHHHHHH
Confidence            689999888899999999999999999999999864311 10   000            01111112233345678899


Q ss_pred             HHhcccCCCCCCC-----CHHHHHH
Q 032213           81 RLLCIQDEPNLRP-----SMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rp-----t~~~v~~  100 (145)
                      +.+||..+|.+|+     ++.+++.
T Consensus       226 i~~~L~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         226 LAGLLKKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             HHHHccCCHHHhCCCCCCCHHHHHc
Confidence            9999999999998     7888764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.35  E-value=1.6e-12  Score=86.96  Aligned_cols=87  Identities=17%  Similarity=0.313  Sum_probs=58.5

Q ss_pred             CCCcccccCC--cccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHH
Q 032213            1 MSPEWQNSGL--ITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~--~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (145)
                      +|||++....  ++.++|+||||++++++++|..|+........ . .  +..     .    ........+......+.
T Consensus       176 ~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~-~-~--~~~-----~----~~~~~~~~~~~~~~~~~  242 (268)
T cd06624         176 MAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA-A-M--FKV-----G----MFKIHPEIPESLSAEAK  242 (268)
T ss_pred             cChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh-h-H--hhh-----h----hhccCCCCCcccCHHHH
Confidence            4788875433  77899999999999999999998864311100 0 0  000     0    00111122334456688


Q ss_pred             HHHHhcccCCCCCCCCHHHHHH
Q 032213           79 RVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +++.+||..+|.+||++.+++.
T Consensus       243 ~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         243 NFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             HHHHHHcCCCchhCCCHHHHHh
Confidence            9999999999999999999875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.35  E-value=6.6e-13  Score=91.31  Aligned_cols=84  Identities=13%  Similarity=0.142  Sum_probs=60.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++|+++|..||......    ..            +..+.......+......+.++
T Consensus       167 ~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~----~~------------~~~~~~~~~~~~~~~~~~~~~l  230 (323)
T cd05584         167 MAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK----KT------------IDKILKGKLNLPPYLTPEARDL  230 (323)
T ss_pred             cChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH----HH------------HHHHHcCCCCCCCCCCHHHHHH
Confidence            5899998888889999999999999999999998643110    00            0111111122233345668899


Q ss_pred             HHhcccCCCCCCC-----CHHHHHH
Q 032213           81 RLLCIQDEPNLRP-----SMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rp-----t~~~v~~  100 (145)
                      +.+||..+|.+||     ++.+++.
T Consensus       231 i~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         231 LKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             HHHHcccCHhHcCCCCCCCHHHHhc
Confidence            9999999999999     7777765

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.35  E-value=2.1e-12  Score=89.86  Aligned_cols=89  Identities=26%  Similarity=0.303  Sum_probs=57.9

Q ss_pred             CCCccccc-----CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHH
Q 032213            1 MSPEWQNS-----GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLE   75 (145)
Q Consensus         1 ~aPe~~~~-----~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (145)
                      +|||++..     ...+.++|||||||+++|+++|+.||..... .....+...         .  ........+.....
T Consensus       235 ~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~-~~~~~~~~~---------~--~~~~~~~~~~~~~~  302 (353)
T PLN00034        235 MSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ-GDWASLMCA---------I--CMSQPPEAPATASR  302 (353)
T ss_pred             cCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC-ccHHHHHHH---------H--hccCCCCCCCccCH
Confidence            57888742     2234589999999999999999999863211 111111000         0  00111112233456


Q ss_pred             HHHHHHHhcccCCCCCCCCHHHHHHH
Q 032213           76 TMVRVRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        76 ~~~~l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      .+.+|+.+||..+|.+||++.+++..
T Consensus       303 ~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        303 EFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhcC
Confidence            78999999999999999999999863

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.35  E-value=3.5e-12  Score=86.07  Aligned_cols=95  Identities=26%  Similarity=0.362  Sum_probs=63.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchh----hHhHHHHHHHHHHHhHhhhhhCc-chhhcH-HHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTAD----VVLLSTWVYNCFIAKELNKLVGE-DEEVDL-RTL   74 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~   74 (145)
                      ++||++.+..++.++|+|+||++++++++|..|+........    ...+...         +..+... ....+. ..+
T Consensus       169 ~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~  239 (284)
T cd06620         169 MSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDL---------LQQIVQEPPPRLPSSDFP  239 (284)
T ss_pred             CCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHH---------HHHHhhccCCCCCchhcC
Confidence            578988777888999999999999999999999875421100    0000110         0111110 011111 245


Q ss_pred             HHHHHHHHhcccCCCCCCCCHHHHHHHhhc
Q 032213           75 ETMVRVRLLCIQDEPNLRPSMKNVILMLEG  104 (145)
Q Consensus        75 ~~~~~l~~~cl~~~p~~Rpt~~~v~~~L~~  104 (145)
                      ..+.+|+.+||..+|.+||++.+++....-
T Consensus       240 ~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~  269 (284)
T cd06620         240 EDLRDFVDACLLKDPTERPTPQQLCAMPPF  269 (284)
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence            568899999999999999999999876443

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.35  E-value=1.4e-12  Score=87.01  Aligned_cols=87  Identities=17%  Similarity=0.197  Sum_probs=60.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+|++|++++++++|..|+...... ..  ....       ..   ........+......+.++
T Consensus       175 ~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-~~--~~~~-------~~---~~~~~~~~~~~~~~~~~~~  241 (265)
T cd06631         175 MAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL-AA--MFYI-------GA---HRGLMPRLPDSFSAAAIDF  241 (265)
T ss_pred             cChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH-HH--HHHh-------hh---ccCCCCCCCCCCCHHHHHH
Confidence            4789888778889999999999999999999998643111 00  0000       00   0000111223345668999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.+++.
T Consensus       242 i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         242 VTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             HHHHhcCCcccCCCHHHHhc
Confidence            99999999999999998864

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.34  E-value=9.3e-13  Score=88.20  Aligned_cols=92  Identities=25%  Similarity=0.351  Sum_probs=57.0

Q ss_pred             CCCcccccC-------CcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHH
Q 032213            1 MSPEWQNSG-------LITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLR   72 (145)
Q Consensus         1 ~aPe~~~~~-------~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (145)
                      +|||++...       .++.++|+||||++++|+++ |..|+...... ...   ....    ......+..+.  ....
T Consensus       169 ~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~-~~~---~~~~----~~~~~~~~~~~--~~~~  238 (269)
T cd05087         169 IAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDE-QVL---TYTV----REQQLKLPKPR--LKLP  238 (269)
T ss_pred             cCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChH-HHH---HHHh----hcccCCCCCCc--cCCC
Confidence            578877532       34779999999999999986 88888643111 110   0000    00000111111  1112


Q ss_pred             HHHHHHHHHHhcccCCCCCCCCHHHHHHHhh
Q 032213           73 TLETMVRVRLLCIQDEPNLRPSMKNVILMLE  103 (145)
Q Consensus        73 ~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~L~  103 (145)
                      ....+.+++.+|| .+|++||++.+|+..|+
T Consensus       239 ~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         239 LSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            2445788999999 68999999999998875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.34  E-value=1.5e-12  Score=86.45  Aligned_cols=85  Identities=21%  Similarity=0.273  Sum_probs=59.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||+..+..++.++|+|+||++++++++|..|+.....    ....   ..     .....+.   .........+.++
T Consensus       169 ~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~---~~-----~~~~~~~---~~~~~~~~~~~~~  233 (257)
T cd08225         169 LSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL----HQLV---LK-----ICQGYFA---PISPNFSRDLRSL  233 (257)
T ss_pred             cCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH----HHHH---HH-----HhcccCC---CCCCCCCHHHHHH
Confidence            478888777788999999999999999999998763311    0000   00     0000111   1122234568999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|++||++.+++.
T Consensus       234 i~~~l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         234 ISQLFKVSPRDRPSITSILK  253 (257)
T ss_pred             HHHHhccChhhCcCHHHHhh
Confidence            99999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.34  E-value=2.1e-12  Score=86.95  Aligned_cols=94  Identities=18%  Similarity=0.236  Sum_probs=60.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+|+||++++++++|..|+................      ..+........ ........+.++
T Consensus       160 ~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~------~~~~~~~~~~~-~~~~~~~~~~~l  232 (279)
T cd06619         160 MAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLL------QCIVDEDPPVL-PVGQFSEKFVHF  232 (279)
T ss_pred             cCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHH------HHHhccCCCCC-CCCcCCHHHHHH
Confidence            58999988888999999999999999999999986431111110000000      00000000100 011124468899


Q ss_pred             HHhcccCCCCCCCCHHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      +.+||+.+|.+||++.+++..
T Consensus       233 i~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         233 ITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             HHHHhhCChhhCCCHHHHhcC
Confidence            999999999999999998763

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.34  E-value=2.4e-12  Score=85.61  Aligned_cols=85  Identities=22%  Similarity=0.308  Sum_probs=61.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ++||++.+..++.++|+|+||++++++++|..|+....    ...+...         +....  ....+......+.++
T Consensus       177 ~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~~~~~~~---------~~~~~--~~~~~~~~~~~~~~l  241 (265)
T cd08217         177 MSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN----QLQLASK---------IKEGK--FRRIPYRYSSELNEV  241 (265)
T ss_pred             cChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC----HHHHHHH---------HhcCC--CCCCccccCHHHHHH
Confidence            57898887778899999999999999999999986431    1111111         00000  011233445678999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.+|++
T Consensus       242 ~~~~l~~~p~~Rp~~~~il~  261 (265)
T cd08217         242 IKSMLNVDPDKRPSTEELLQ  261 (265)
T ss_pred             HHHHccCCcccCCCHHHHhh
Confidence            99999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.34  E-value=1e-12  Score=90.11  Aligned_cols=83  Identities=17%  Similarity=0.214  Sum_probs=58.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++|+++|..|+.....    ..+..            .+.......+......+.++
T Consensus       163 ~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~----~~~~~------------~i~~~~~~~~~~~~~~~~~l  226 (316)
T cd05592         163 IAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE----DELFD------------SILNDRPHFPRWISKEAKDC  226 (316)
T ss_pred             cCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH----HHHHH------------HHHcCCCCCCCCCCHHHHHH
Confidence            589999888899999999999999999999999864311    11110            01111112233345567899


Q ss_pred             HHhcccCCCCCCCCHH-HHH
Q 032213           81 RLLCIQDEPNLRPSMK-NVI   99 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~-~v~   99 (145)
                      +.+||..+|.+||++. +++
T Consensus       227 l~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05592         227 LSKLFERDPTKRLGVDGDIR  246 (316)
T ss_pred             HHHHccCCHHHcCCChHHHH
Confidence            9999999999999875 443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.34  E-value=1.7e-12  Score=87.81  Aligned_cols=88  Identities=17%  Similarity=0.256  Sum_probs=60.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..||...........+..            .+.......+......+.+|
T Consensus       168 ~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l  235 (285)
T cd05605         168 MAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVER------------RVKEDQEEYSEKFSEAARSI  235 (285)
T ss_pred             cCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHH------------HhhhcccccCcccCHHHHHH
Confidence            589998888889999999999999999999999875311111000000            01111112233345668999


Q ss_pred             HHhcccCCCCCCC-----CHHHHHH
Q 032213           81 RLLCIQDEPNLRP-----SMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rp-----t~~~v~~  100 (145)
                      +.+||..||.+||     ++.+++.
T Consensus       236 i~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05605         236 CRQLLTKDPGFRLGCRGEGAEEVKA  260 (285)
T ss_pred             HHHHccCCHHHhcCCCCCCHHHHhc
Confidence            9999999999999     7778754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.33  E-value=1e-12  Score=90.18  Aligned_cols=83  Identities=19%  Similarity=0.195  Sum_probs=58.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..|+.... ..   .+.....            ......+......+.++
T Consensus       163 ~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~-~~---~~~~~i~------------~~~~~~~~~~~~~~~~l  226 (316)
T cd05619         163 IAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD-EE---ELFQSIR------------MDNPCYPRWLTREAKDI  226 (316)
T ss_pred             cCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC-HH---HHHHHHH------------hCCCCCCccCCHHHHHH
Confidence            68999988889999999999999999999999986431 11   1111100            00011122234567899


Q ss_pred             HHhcccCCCCCCCCHH-HHH
Q 032213           81 RLLCIQDEPNLRPSMK-NVI   99 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~-~v~   99 (145)
                      +.+||..+|.+|+++. ++.
T Consensus       227 i~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05619         227 LVKLFVREPERRLGVKGDIR  246 (316)
T ss_pred             HHHHhccCHhhcCCChHHHH
Confidence            9999999999999997 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.33  E-value=2.3e-12  Score=87.18  Aligned_cols=87  Identities=15%  Similarity=0.142  Sum_probs=57.4

Q ss_pred             CCCcccccC-----CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHH
Q 032213            1 MSPEWQNSG-----LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLE   75 (145)
Q Consensus         1 ~aPe~~~~~-----~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (145)
                      ++||++...     .++.++|+||||++++++++|..|+......   ..+..          +..-.......+.....
T Consensus       195 ~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~---~~~~~----------~~~~~~~~~~~~~~~~~  261 (291)
T cd06639         195 MAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV---KTLFK----------IPRNPPPTLLHPEKWCR  261 (291)
T ss_pred             cChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH---HHHHH----------HhcCCCCCCCcccccCH
Confidence            478877533     2678999999999999999999988643111   11110          00000011111222345


Q ss_pred             HHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           76 TMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        76 ~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+.+++.+||+.+|.+||++.+++.
T Consensus       262 ~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         262 SFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             HHHHHHHHHhhcChhhCcCHHHHhc
Confidence            6889999999999999999999875

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.33  E-value=1.4e-12  Score=93.29  Aligned_cols=99  Identities=15%  Similarity=0.131  Sum_probs=61.0

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhH-------hhhh-----hCcch
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKE-------LNKL-----VGEDE   67 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-----~~~~~   67 (145)
                      +|||++.+ ..++.++|+||+||+++||++|..||...........+..... ......       +..+     .....
T Consensus       237 ~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~l  315 (440)
T PTZ00036        237 RAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLG-TPTEDQLKEMNPNYADIKFPDVKPKDL  315 (440)
T ss_pred             cCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC-CCCHHHHHHhchhhhcccCCccCchhH
Confidence            68998765 4688999999999999999999999875422111111111000 000000       0000     00000


Q ss_pred             --hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 --EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 --~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                        ..+...+..+.+|+.+||..+|.+|+++.+++.
T Consensus       316 ~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~  350 (440)
T PTZ00036        316 KKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA  350 (440)
T ss_pred             HHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence              112223457889999999999999999999985

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.33  E-value=6.8e-13  Score=88.68  Aligned_cols=91  Identities=15%  Similarity=0.235  Sum_probs=58.0

Q ss_pred             CCCcccc---cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHH
Q 032213            1 MSPEWQN---SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~---~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (145)
                      +|||.+.   ...++.++|+||||++++|+++|..|+...........+.        ..   ....+........+..+
T Consensus       173 ~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~--------~~---~~~~~~~~~~~~~~~~~  241 (267)
T cd06646         173 MAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMS--------KS---NFQPPKLKDKTKWSSTF  241 (267)
T ss_pred             cCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeee--------cC---CCCCCCCccccccCHHH
Confidence            4788764   3446788999999999999999998875331110000000        00   00011111111234578


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHHHh
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVILML  102 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~~L  102 (145)
                      .+++.+||..+|.+||++.+++..|
T Consensus       242 ~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         242 HNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             HHHHHHHhhCChhhCcCHHHHhcCC
Confidence            8999999999999999999987643

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.33  E-value=1.5e-12  Score=87.90  Aligned_cols=85  Identities=22%  Similarity=0.321  Sum_probs=58.8

Q ss_pred             CCCcccccC---CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhC---cch--hhcHH
Q 032213            1 MSPEWQNSG---LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVG---EDE--EVDLR   72 (145)
Q Consensus         1 ~aPe~~~~~---~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~   72 (145)
                      +|||++.+.   .++.++|+|++|++++++++|..|+....   .   ....         +.....   +..  .....
T Consensus       174 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~---~---~~~~---------~~~~~~~~~~~~~~~~~~~  238 (288)
T cd06616         174 MAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN---S---VFDQ---------LTQVVKGDPPILSNSEERE  238 (288)
T ss_pred             cCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc---h---HHHH---------HhhhcCCCCCcCCCcCCCc
Confidence            478888755   58889999999999999999999986431   0   0000         000000   000  11122


Q ss_pred             HHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           73 TLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        73 ~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ....+.+|+.+||..+|.+||++.+|+.
T Consensus       239 ~~~~l~~li~~~l~~~p~~Rpt~~~i~~  266 (288)
T cd06616         239 FSPSFVNFINLCLIKDESKRPKYKELLE  266 (288)
T ss_pred             cCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            4567899999999999999999999875

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.33  E-value=1.7e-12  Score=87.76  Aligned_cols=87  Identities=11%  Similarity=0.144  Sum_probs=60.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ++||++.+..++.++|+|+||++++++++|..|+.....    .....         .+.....+....+......+.++
T Consensus       182 ~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~----~~~~~---------~~~~~~~~~~~~~~~~~~~l~~l  248 (285)
T cd06648         182 MAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP----LQAMK---------RIRDNLPPKLKNLHKVSPRLRSF  248 (285)
T ss_pred             cCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH----HHHHH---------HHHhcCCCCCcccccCCHHHHHH
Confidence            578888777889999999999999999999998764311    00000         00001111111122234578999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.++++
T Consensus       249 i~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         249 LDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             HHHHcccChhhCcCHHHHcc
Confidence            99999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.33  E-value=3.4e-12  Score=85.12  Aligned_cols=88  Identities=24%  Similarity=0.367  Sum_probs=60.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCc-hhhHhHHHHHHHHHHHhHhhhhhC-cchhhcHH-HHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVST-ADVVLLSTWVYNCFIAKELNKLVG-EDEEVDLR-TLETM   77 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~   77 (145)
                      ++||++.+..++.++|+|+||++++++++|..|+...... .......            ..... .....+.. ....+
T Consensus       166 ~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~  233 (265)
T cd06605         166 MAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELL------------QYIVNEPPPRLPSGKFSPDF  233 (265)
T ss_pred             cCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHH------------HHHhcCCCCCCChhhcCHHH
Confidence            5799988888999999999999999999999988643111 1111110            00111 11111222 45668


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHH
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+++.+||..+|.+||++.+++.
T Consensus       234 ~~li~~~l~~~p~~Rpt~~~ll~  256 (265)
T cd06605         234 QDFVNLCLIKDPRERPSYKELLE  256 (265)
T ss_pred             HHHHHHHcCCCchhCcCHHHHhh
Confidence            99999999999999999999975

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.33  E-value=6.7e-13  Score=91.39  Aligned_cols=100  Identities=22%  Similarity=0.267  Sum_probs=59.0

Q ss_pred             CCCccccc--CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHH------HHHhHhh------------
Q 032213            1 MSPEWQNS--GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNC------FIAKELN------------   60 (145)
Q Consensus         1 ~aPe~~~~--~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~------------   60 (145)
                      +|||++.+  ..++.++|+||||++++|+++|..||...................      .....+.            
T Consensus       175 ~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (327)
T cd08227         175 LSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGL  254 (327)
T ss_pred             cChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCC
Confidence            57998865  358899999999999999999999986431111000000000000      0000000            


Q ss_pred             -h--h---hCc------chhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           61 -K--L---VGE------DEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        61 -~--~---~~~------~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                       .  .   ...      ..+........+.+|+.+||+.||.+|||+.+++.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~  306 (327)
T cd08227         255 GESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN  306 (327)
T ss_pred             CcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence             0  0   000      00011123456889999999999999999999986

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.33  E-value=4e-12  Score=85.94  Aligned_cols=95  Identities=22%  Similarity=0.354  Sum_probs=61.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCc-hhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVST-ADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||.+.+..++.++|+|++|++++++++|..|+...... .....+..+....     ....+.............+.+
T Consensus       170 ~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~  244 (287)
T cd06621         170 MAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM-----PNPELKDEPGNGIKWSEEFKD  244 (287)
T ss_pred             cCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC-----CchhhccCCCCCCchHHHHHH
Confidence            4788888888899999999999999999999998644110 1111111111100     000011111101123456899


Q ss_pred             HHHhcccCCCCCCCCHHHHHH
Q 032213           80 VRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ++.+||..+|.+||++.+++.
T Consensus       245 li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         245 FIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             HHHHHcCCCcccCCCHHHHHh
Confidence            999999999999999999986

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.33  E-value=9e-13  Score=90.56  Aligned_cols=79  Identities=19%  Similarity=0.284  Sum_probs=56.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++|+||+|++++++++|..||.....    ..+...            +.......+......+.++
T Consensus       163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~----~~~~~~------------i~~~~~~~~~~~~~~~~~l  226 (320)
T cd05590         163 IAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE----DDLFEA------------ILNDEVVYPTWLSQDAVDI  226 (320)
T ss_pred             cCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH----HHHHHH------------HhcCCCCCCCCCCHHHHHH
Confidence            689999888889999999999999999999999864311    111110            1111111222335568899


Q ss_pred             HHhcccCCCCCCCCH
Q 032213           81 RLLCIQDEPNLRPSM   95 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~   95 (145)
                      +.+||..+|.+|+++
T Consensus       227 i~~~L~~dP~~R~~~  241 (320)
T cd05590         227 LKAFMTKNPTMRLGS  241 (320)
T ss_pred             HHHHcccCHHHCCCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.33  E-value=3.6e-12  Score=88.83  Aligned_cols=100  Identities=14%  Similarity=0.064  Sum_probs=61.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHH------HHHHhHhhhhhCcch-------
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYN------CFIAKELNKLVGEDE-------   67 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~-------   67 (145)
                      +|||++.+..++.++|+||+|++++++++|..||..................      ...............       
T Consensus       189 ~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (359)
T cd07876         189 RAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISF  268 (359)
T ss_pred             CCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcch
Confidence            5899998888999999999999999999999998744111110000000000      000000000000000       


Q ss_pred             -------------hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 -------------EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 -------------~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                                   .........+.+|+.+||..||.+||++.+++.
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  314 (359)
T cd07876         269 EELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR  314 (359)
T ss_pred             hhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence                         001112356789999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.33  E-value=1.7e-12  Score=87.49  Aligned_cols=100  Identities=11%  Similarity=0.159  Sum_probs=60.1

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHH--------hHhhh--hhCcch--
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIA--------KELNK--LVGEDE--   67 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~--~~~~~~--   67 (145)
                      +|||++.+. .++.++|+|+||++++++++|..|+......................        .....  ......  
T Consensus       168 ~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (288)
T cd07833         168 RAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPE  247 (288)
T ss_pred             cCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcH
Confidence            589998877 78899999999999999999998876431111110000000000000        00000  000000  


Q ss_pred             ----hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 ----EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 ----~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                          ..+...+..+.+++.+||..+|++||++.+++.
T Consensus       248 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         248 SLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             HHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence                111123567899999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.33  E-value=2.6e-12  Score=88.78  Aligned_cols=36  Identities=33%  Similarity=0.493  Sum_probs=32.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCC
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEV   36 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~   36 (145)
                      +|||++.+..++.++|+||||++++++++|+.|+..
T Consensus       169 ~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~  204 (333)
T cd06650         169 MSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP  204 (333)
T ss_pred             cCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            589999888889999999999999999999998864

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.32  E-value=1.1e-12  Score=90.50  Aligned_cols=84  Identities=20%  Similarity=0.229  Sum_probs=60.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..||.... ..   ....            .+.......+......+.++
T Consensus       162 ~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~-~~---~~~~------------~~~~~~~~~p~~~~~~~~~l  225 (328)
T cd05593         162 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-HE---KLFE------------LILMEDIKFPRTLSADAKSL  225 (328)
T ss_pred             cChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCC-HH---HHHH------------HhccCCccCCCCCCHHHHHH
Confidence            68999988889999999999999999999999986431 11   1110            01111112233345668899


Q ss_pred             HHhcccCCCCCCC-----CHHHHHH
Q 032213           81 RLLCIQDEPNLRP-----SMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rp-----t~~~v~~  100 (145)
                      +.+||..+|.+|+     ++.+++.
T Consensus       226 i~~~L~~dP~~R~~~~~~~~~~il~  250 (328)
T cd05593         226 LSGLLIKDPNKRLGGGPDDAKEIMR  250 (328)
T ss_pred             HHHHcCCCHHHcCCCCCCCHHHHhc
Confidence            9999999999997     8888875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.32  E-value=1.8e-12  Score=86.12  Aligned_cols=86  Identities=21%  Similarity=0.349  Sum_probs=58.2

Q ss_pred             CCCcccccC--CcccccchhhHHHHHHHHHhC-CCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHH
Q 032213            1 MSPEWQNSG--LITVKSDVYSFGVVLLEIVCC-RSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~~~--~~~~~~dv~s~g~v~~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (145)
                      +|||++.+.  .++.++|+||||++++++++| ..|+.... .........          .    ....+.+  ....+
T Consensus       171 ~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~-~~~~~~~~~----------~----~~~~~~~--~~~~~  233 (259)
T cd05037         171 IAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLS-SSEKERFYQ----------D----QHRLPMP--DCAEL  233 (259)
T ss_pred             cChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCC-chhHHHHHh----------c----CCCCCCC--CchHH
Confidence            479988765  688899999999999999985 55554331 111110000          0    0000011  12578


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHHHhh
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVILMLE  103 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~~L~  103 (145)
                      .+++.+||..+|.+||++.++++.|+
T Consensus       234 ~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         234 ANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             HHHHHHHhccChhhCCCHHHHHHhcC
Confidence            89999999999999999999998774

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.32  E-value=4.4e-12  Score=84.51  Aligned_cols=88  Identities=17%  Similarity=0.253  Sum_probs=58.2

Q ss_pred             CCCcccccCC---cccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHH
Q 032213            1 MSPEWQNSGL---ITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~~~~---~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (145)
                      ++||++.+..   ++.++|+|+||++++++++|..||...... ....+.           ......+..+........+
T Consensus       170 ~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~-~~~~~~-----------~~~~~~~~~~~~~~~~~~~  237 (264)
T cd06626         170 MAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE-FQIMFH-----------VGAGHKPPIPDSLQLSPEG  237 (264)
T ss_pred             cChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch-HHHHHH-----------HhcCCCCCCCcccccCHHH
Confidence            4788887655   788999999999999999999998643111 110000           0000011111111225567


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHH
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+++.+||+.+|.+||++.+++.
T Consensus       238 ~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         238 KDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             HHHHHHHccCCcccCCCHHHHhc
Confidence            89999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.32  E-value=4.3e-12  Score=86.62  Aligned_cols=87  Identities=18%  Similarity=0.200  Sum_probs=58.1

Q ss_pred             CCCcccc---cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHH
Q 032213            1 MSPEWQN---SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~---~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (145)
                      +|||++.   ...++.++|+|+||+++||+++|..|+...........+       . ..      ......+......+
T Consensus       178 ~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~-------~-~~------~~~~~~~~~~~~~~  243 (307)
T cd06607         178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI-------A-QN------DSPTLSSNDWSDYF  243 (307)
T ss_pred             cCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHH-------h-cC------CCCCCCchhhCHHH
Confidence            5788874   355788999999999999999999987643110000000       0 00      00000112235568


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHHH
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      .+++.+||..+|.+||++.+++..
T Consensus       244 ~~li~~~l~~~p~~Rp~~~~il~~  267 (307)
T cd06607         244 RNFVDSCLQKIPQDRPSSEELLKH  267 (307)
T ss_pred             HHHHHHHhcCChhhCcCHHHHhcC
Confidence            999999999999999999999763

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.32  E-value=2.8e-12  Score=87.03  Aligned_cols=88  Identities=13%  Similarity=0.212  Sum_probs=60.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||+..+..++.++|+||||++++|+++|..|+...... ..  + .         .+.................+..+
T Consensus       185 ~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-~~--~-~---------~~~~~~~~~~~~~~~~~~~~~~l  251 (292)
T cd06658         185 MAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL-QA--M-R---------RIRDNLPPRVKDSHKVSSVLRGF  251 (292)
T ss_pred             cCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HH--H-H---------HHHhcCCCccccccccCHHHHHH
Confidence            5788887778889999999999999999999998643111 00  0 0         01111111111112234467889


Q ss_pred             HHhcccCCCCCCCCHHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      +.+||..+|.+||++.+++..
T Consensus       252 i~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         252 LDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             HHHHccCChhHCcCHHHHhhC
Confidence            999999999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.32  E-value=9.8e-13  Score=90.37  Aligned_cols=84  Identities=17%  Similarity=0.207  Sum_probs=59.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..|+.....    .....            .+.......+......+.++
T Consensus       163 ~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~----~~~~~------------~i~~~~~~~p~~~~~~~~~l  226 (321)
T cd05591         163 IAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE----DDLFE------------SILHDDVLYPVWLSKEAVSI  226 (321)
T ss_pred             cCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH----HHHHH------------HHHcCCCCCCCCCCHHHHHH
Confidence            589998888899999999999999999999999874311    11111            01111111122234568899


Q ss_pred             HHhcccCCCCCCC-------CHHHHHH
Q 032213           81 RLLCIQDEPNLRP-------SMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rp-------t~~~v~~  100 (145)
                      +.+||..+|.+|+       ++.+++.
T Consensus       227 l~~~L~~dp~~R~~~~~~~~~~~~~~~  253 (321)
T cd05591         227 LKAFMTKNPNKRLGCVASQGGEDAIKQ  253 (321)
T ss_pred             HHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence            9999999999999       7777764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.32  E-value=1.8e-12  Score=90.19  Aligned_cols=101  Identities=15%  Similarity=0.085  Sum_probs=61.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHH---HHH---HHhHhhhhhCc---------
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVY---NCF---IAKELNKLVGE---------   65 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~---------   65 (145)
                      +|||++.+..++.++|+||||++++++++|..||.................   ...   ........+..         
T Consensus       185 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (355)
T cd07874         185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTF  264 (355)
T ss_pred             cCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccc
Confidence            589999888899999999999999999999999864411111111100000   000   00000000000         


Q ss_pred             -----------chhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 032213           66 -----------DEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        66 -----------~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                                 ...........+.+|+.+||..||.+|||+.+++..
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         265 PKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             hhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence                       000111123467899999999999999999999873

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.32  E-value=2.5e-12  Score=86.69  Aligned_cols=100  Identities=14%  Similarity=0.070  Sum_probs=58.5

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHh---HhhhhhCc--------ch-
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAK---ELNKLVGE--------DE-   67 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--------~~-   67 (145)
                      +|||++.+. .++.++|+||+|++++++++|..|+.......................   .+....+.        .. 
T Consensus       166 ~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (284)
T cd07839         166 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTS  245 (284)
T ss_pred             cChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcch
Confidence            578987654 468899999999999999999988654322211111100000000000   00000000        00 


Q ss_pred             --hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 --EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 --~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                        .........+.+++.+||+.+|.+|||+.+++.
T Consensus       246 ~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         246 LVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             hhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence              011123456789999999999999999999865

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.32  E-value=3.5e-12  Score=84.70  Aligned_cols=86  Identities=23%  Similarity=0.356  Sum_probs=59.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+|+||++++++++|..|+.....    .......   . .       ......+......+.++
T Consensus       168 ~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~----~~~~~~~---~-~-------~~~~~~~~~~~~~~~~~  232 (256)
T cd08221         168 MSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP----LNLVVKI---V-Q-------GNYTPVVSVYSSELISL  232 (256)
T ss_pred             cCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH----HHHHHHH---H-c-------CCCCCCccccCHHHHHH
Confidence            478888777788899999999999999999988864311    1111000   0 0       00011122335668899


Q ss_pred             HHhcccCCCCCCCCHHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      +.+||..+|.+||++.+++..
T Consensus       233 i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         233 VHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             HHHHcccCcccCCCHHHHhhC
Confidence            999999999999999999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.31  E-value=3.4e-12  Score=85.38  Aligned_cols=87  Identities=16%  Similarity=0.175  Sum_probs=57.5

Q ss_pred             CCCccccc-----CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHH
Q 032213            1 MSPEWQNS-----GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLE   75 (145)
Q Consensus         1 ~aPe~~~~-----~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (145)
                      +|||++..     ..++.++|+|++|++++++++|..|+........   +..          +..........+.....
T Consensus       180 ~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~----------~~~~~~~~~~~~~~~~~  246 (275)
T cd06608         180 MAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA---LFK----------IPRNPPPTLKSPENWSK  246 (275)
T ss_pred             cCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH---HHH----------hhccCCCCCCchhhcCH
Confidence            47887643     2367789999999999999999999864311100   000          00000111122223455


Q ss_pred             HHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           76 TMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        76 ~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+.+++.+||..+|.+||++.+++.
T Consensus       247 ~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         247 KFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             HHHHHHHHHhhcChhhCcCHHHHhc
Confidence            7889999999999999999999875

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.31  E-value=1.5e-11  Score=85.74  Aligned_cols=34  Identities=29%  Similarity=0.472  Sum_probs=30.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCC
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNF   34 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~   34 (145)
                      +|||++.+..++.++|+||||++++|++++..++
T Consensus       223 ~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        223 NAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             cCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence            5899998888999999999999999999866554

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.31  E-value=1.5e-12  Score=89.35  Aligned_cols=83  Identities=19%  Similarity=0.193  Sum_probs=58.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..|+... ..   ..+...            +.......+......+.++
T Consensus       163 ~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~-~~---~~~~~~------------~~~~~~~~~~~~~~~~~~l  226 (316)
T cd05620         163 IAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGD-DE---DELFES------------IRVDTPHYPRWITKESKDI  226 (316)
T ss_pred             cCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCC-CH---HHHHHH------------HHhCCCCCCCCCCHHHHHH
Confidence            5899998888999999999999999999999998643 11   111110            0001111122234567899


Q ss_pred             HHhcccCCCCCCCCHH-HHH
Q 032213           81 RLLCIQDEPNLRPSMK-NVI   99 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~-~v~   99 (145)
                      +.+||+.+|.+|+++. ++.
T Consensus       227 i~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         227 LEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             HHHHccCCHHHcCCChHHHH
Confidence            9999999999999985 454

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.31  E-value=1.4e-12  Score=87.89  Aligned_cols=88  Identities=16%  Similarity=0.206  Sum_probs=59.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhh-cHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEV-DLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+|++++|+++|..|+.............            .......... .......+.+
T Consensus       161 ~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~  228 (277)
T cd05607         161 MAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELK------------RRTLEDEVKFEHQNFTEESKD  228 (277)
T ss_pred             cCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHH------------HHhhccccccccccCCHHHHH
Confidence            58999888889999999999999999999999986431111111110            0011111100 1123456899


Q ss_pred             HHHhcccCCCCCCCCHHHHHH
Q 032213           80 VRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ++.+||+.+|.+||++.+++.
T Consensus       229 li~~~L~~~P~~R~~~~~~~~  249 (277)
T cd05607         229 ICRLFLAKKPEDRLGSREKND  249 (277)
T ss_pred             HHHHHhccCHhhCCCCccchh
Confidence            999999999999999977653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.31  E-value=3.8e-12  Score=86.23  Aligned_cols=87  Identities=17%  Similarity=0.198  Sum_probs=57.3

Q ss_pred             CCCcccc-----cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHH
Q 032213            1 MSPEWQN-----SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLE   75 (145)
Q Consensus         1 ~aPe~~~-----~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (145)
                      +|||++.     ...++.++|+||||+++|++++|..|+...... .  ....          +.....+....+.....
T Consensus       177 ~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~--~~~~----------~~~~~~~~~~~~~~~~~  243 (292)
T cd06644         177 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-R--VLLK----------IAKSEPPTLSQPSKWSM  243 (292)
T ss_pred             cCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH-H--HHHH----------HhcCCCccCCCCcccCH
Confidence            4788874     234677899999999999999999887643110 0  0000          00000111112223345


Q ss_pred             HHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           76 TMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        76 ~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+.+++.+||..+|.+||++.+++.
T Consensus       244 ~~~~li~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         244 EFRDFLKTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             HHHHHHHHHhcCCcccCcCHHHHhc
Confidence            6889999999999999999999975

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.31  E-value=8.1e-12  Score=84.32  Aligned_cols=87  Identities=25%  Similarity=0.412  Sum_probs=59.2

Q ss_pred             CCCcccccCC------cccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhC-cchhhcHHH
Q 032213            1 MSPEWQNSGL------ITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVG-EDEEVDLRT   73 (145)
Q Consensus         1 ~aPe~~~~~~------~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   73 (145)
                      +|||++.+..      ++.++|+|++|++++++++|..|+...... .   ..         ..+..+.. .....+...
T Consensus       168 ~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~---~~---------~~~~~~~~~~~~~~~~~~  234 (286)
T cd06622         168 MAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA-N---IF---------AQLSAIVDGDPPTLPSGY  234 (286)
T ss_pred             cCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh-h---HH---------HHHHHHhhcCCCCCCccc
Confidence            4788875433      478899999999999999999998643110 0   00         00111111 111233445


Q ss_pred             HHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           74 LETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        74 ~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ...+.+++.+||+.+|.+||++.+++.
T Consensus       235 ~~~~~~li~~~l~~~p~~Rp~~~~l~~  261 (286)
T cd06622         235 SDDAQDFVAKCLNKIPNRRPTYAQLLE  261 (286)
T ss_pred             CHHHHHHHHHHcccCcccCCCHHHHhc
Confidence            677899999999999999999999876

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.31  E-value=1.6e-12  Score=89.41  Aligned_cols=79  Identities=16%  Similarity=0.183  Sum_probs=56.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..||.... .   .....            .+.......+......+.++
T Consensus       168 ~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~-~---~~~~~------------~i~~~~~~~~~~~~~~~~~l  231 (324)
T cd05587         168 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED-E---DELFQ------------SIMEHNVSYPKSLSKEAVSI  231 (324)
T ss_pred             cChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC-H---HHHHH------------HHHcCCCCCCCCCCHHHHHH
Confidence            58999988889999999999999999999999986431 1   11111            11111112233345568899


Q ss_pred             HHhcccCCCCCCCCH
Q 032213           81 RLLCIQDEPNLRPSM   95 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~   95 (145)
                      +.+||..+|.+|++.
T Consensus       232 i~~~l~~~P~~R~~~  246 (324)
T cd05587         232 CKGLLTKHPAKRLGC  246 (324)
T ss_pred             HHHHhhcCHHHcCCC
Confidence            999999999999976

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.30  E-value=1.3e-12  Score=89.77  Aligned_cols=79  Identities=18%  Similarity=0.192  Sum_probs=57.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+|||||+++|+++|..|+.... .   ..+..            .+.......+......+.++
T Consensus       168 ~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~-~---~~~~~------------~i~~~~~~~p~~~s~~~~~l  231 (323)
T cd05616         168 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-E---DELFQ------------SIMEHNVAYPKSMSKEAVAI  231 (323)
T ss_pred             cCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCC-H---HHHHH------------HHHhCCCCCCCcCCHHHHHH
Confidence            68999988889999999999999999999999987431 1   11111            01111112233445678999


Q ss_pred             HHhcccCCCCCCCCH
Q 032213           81 RLLCIQDEPNLRPSM   95 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~   95 (145)
                      +.+|++.+|.+|++.
T Consensus       232 i~~~l~~~p~~R~~~  246 (323)
T cd05616         232 CKGLMTKHPGKRLGC  246 (323)
T ss_pred             HHHHcccCHHhcCCC
Confidence            999999999999984

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.30  E-value=6.2e-12  Score=86.25  Aligned_cols=93  Identities=18%  Similarity=0.193  Sum_probs=61.3

Q ss_pred             CCCcccc---cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHH
Q 032213            1 MSPEWQN---SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~---~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (145)
                      +|||++.   .+.++.++|+|+||++++++++|..|+.............        ...    . . ..........+
T Consensus       188 ~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~--------~~~----~-~-~~~~~~~~~~l  253 (317)
T cd06635         188 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA--------QNE----S-P-TLQSNEWSDYF  253 (317)
T ss_pred             cChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH--------hcc----C-C-CCCCccccHHH
Confidence            5788873   4567889999999999999999999876431110000000        000    0 0 01111234568


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      .+++.+||+.+|.+||++.+++..+-.+..
T Consensus       254 ~~li~~~l~~~p~~Rpt~~~il~~~~~~~~  283 (317)
T cd06635         254 RNFVDSCLQKIPQDRPTSEELLKHMFVLRE  283 (317)
T ss_pred             HHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence            899999999999999999999876554443

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.30  E-value=2.6e-12  Score=87.54  Aligned_cols=100  Identities=11%  Similarity=0.040  Sum_probs=58.5

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhh------h--------hCc
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNK------L--------VGE   65 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--------~~~   65 (145)
                      +|||++.+ ..++.++|+||+|++++++++|..||........................+..      .        ...
T Consensus       170 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (303)
T cd07869         170 RPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPK  249 (303)
T ss_pred             CChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCc
Confidence            58998764 45788899999999999999999998754222111111111000000000000      0        000


Q ss_pred             chhhcH---HHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           66 DEEVDL---RTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        66 ~~~~~~---~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ......   .....+.+|+.+|++.||.+|||+.+++.
T Consensus       250 ~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         250 NLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             cHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence            000000   01245779999999999999999999975

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.30  E-value=4.2e-12  Score=84.66  Aligned_cols=90  Identities=18%  Similarity=0.321  Sum_probs=58.8

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||++... .++.++|+|+||++++++++|..|+.......   .+.....     ... ...... ......+..+.+
T Consensus       173 ~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~---~~~~~~~-----~~~-~~~~~~-~~~~~~~~~~~~  242 (267)
T cd06610         173 MAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK---VLMLTLQ-----NDP-PSLETG-ADYKKYSKSFRK  242 (267)
T ss_pred             cChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh---hHHHHhc-----CCC-CCcCCc-cccccccHHHHH
Confidence            478887755 68889999999999999999999986431111   1110000     000 000000 001133566889


Q ss_pred             HHHhcccCCCCCCCCHHHHHH
Q 032213           80 VRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ++.+||..+|.+||++.+++.
T Consensus       243 li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         243 MISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             HHHHHcCCChhhCcCHHHHhh
Confidence            999999999999999999875

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.30  E-value=3.9e-12  Score=91.05  Aligned_cols=84  Identities=17%  Similarity=0.276  Sum_probs=67.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||.+.+..|+..+|+||+||++||+..|++||...    ....+            .+.++......|......+..+
T Consensus       167 mAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~----si~~L------------v~~I~~d~v~~p~~~S~~f~nf  230 (808)
T KOG0597|consen  167 MAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR----SITQL------------VKSILKDPVKPPSTASSSFVNF  230 (808)
T ss_pred             cCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH----HHHHH------------HHHHhcCCCCCcccccHHHHHH
Confidence            8999999999999999999999999999999999743    11111            1223334344455667789999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +...+.+||..|.+..+++.
T Consensus       231 l~gLL~kdP~~RltW~~Ll~  250 (808)
T KOG0597|consen  231 LQGLLIKDPAQRLTWTDLLG  250 (808)
T ss_pred             HHHHhhcChhhcccHHHHhc
Confidence            99999999999999999985

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.30  E-value=4.2e-12  Score=86.79  Aligned_cols=97  Identities=24%  Similarity=0.261  Sum_probs=59.6

Q ss_pred             CCCccccc--CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHH----HH----Hh---Hhhh----h-
Q 032213            1 MSPEWQNS--GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNC----FI----AK---ELNK----L-   62 (145)
Q Consensus         1 ~aPe~~~~--~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~----~~----~~---~~~~----~-   62 (145)
                      +|||++..  ..++.++|+||||++++|+++|..||........   +.......    ..    ..   ....    . 
T Consensus       175 ~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (314)
T cd08216         175 LSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM---LLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNE  251 (314)
T ss_pred             cCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHhccCccccccCchhhhcCCcCccccccc
Confidence            47888764  3477899999999999999999999875411111   11100000    00    00   0000    0 


Q ss_pred             -----hCcchhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           63 -----VGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        63 -----~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                           ..............+.+++..||..+|.+||++.+++.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  294 (314)
T cd08216         252 HPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN  294 (314)
T ss_pred             ccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence                 00011222334567889999999999999999999986

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.30  E-value=6.2e-12  Score=84.58  Aligned_cols=99  Identities=14%  Similarity=0.145  Sum_probs=59.8

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhh-----------hh---Cc
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNK-----------LV---GE   65 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~---~~   65 (145)
                      ++||.+.+. .++.++|+|++|++++++++|+.++... ....................+..           ..   ..
T Consensus       165 ~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (283)
T cd05118         165 RAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGK-SEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGM  243 (283)
T ss_pred             cCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhcccccc
Confidence            478887655 6788999999999999999999887543 11111111100000000000000           00   00


Q ss_pred             c-hhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           66 D-EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        66 ~-~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      . ..........+.+++.+||..+|.+||++.+++.
T Consensus       244 ~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         244 PLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             CHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence            0 0112234667899999999999999999999875

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.30  E-value=1.8e-12  Score=89.42  Aligned_cols=88  Identities=15%  Similarity=0.159  Sum_probs=59.0

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++.+. .++.++|+||||++++|+++|..|+...........+..            .+.......+......+.+
T Consensus       173 ~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~  240 (332)
T cd05614         173 MAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSR------------RILKCDPPFPSFIGPEAQD  240 (332)
T ss_pred             cCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHH------------HHhcCCCCCCCCCCHHHHH
Confidence            589988754 377899999999999999999999864311111111110            0111111223334556889


Q ss_pred             HHHhcccCCCCCCC-----CHHHHHH
Q 032213           80 VRLLCIQDEPNLRP-----SMKNVIL  100 (145)
Q Consensus        80 l~~~cl~~~p~~Rp-----t~~~v~~  100 (145)
                      ++.+||..+|.+||     ++.+++.
T Consensus       241 li~~~l~~dp~~R~~~~~~~~~~~l~  266 (332)
T cd05614         241 LLHKLLRKDPKKRLGAGPQGASEIKE  266 (332)
T ss_pred             HHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence            99999999999999     6777764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.30  E-value=3.8e-12  Score=86.05  Aligned_cols=88  Identities=17%  Similarity=0.255  Sum_probs=59.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..|+.............            ..+.......+......+.+|
T Consensus       168 ~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~l  235 (285)
T cd05632         168 MAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVD------------RRVLETEEVYSAKFSEEAKSI  235 (285)
T ss_pred             cChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH------------HhhhccccccCccCCHHHHHH
Confidence            58999988889999999999999999999999987431111100000            001111111222335567899


Q ss_pred             HHhcccCCCCCCCC-----HHHHHH
Q 032213           81 RLLCIQDEPNLRPS-----MKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt-----~~~v~~  100 (145)
                      +.+||..+|.+||+     +.+++.
T Consensus       236 i~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05632         236 CKMLLTKDPKQRLGCQEEGAGEVKR  260 (285)
T ss_pred             HHHHccCCHhHcCCCcccChHHHHc
Confidence            99999999999999     556654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.29  E-value=5.2e-12  Score=84.75  Aligned_cols=89  Identities=25%  Similarity=0.313  Sum_probs=60.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||++.+..++.++|+||||++++++++ |..|+... ..  . ......    ....+      ....+...+..+.+
T Consensus       185 ~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~-~~--~-~~~~~~----~~~~~------~~~~~~~~~~~l~~  250 (275)
T cd05046         185 LAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGL-SD--E-EVLNRL----QAGKL------ELPVPEGCPSRLYK  250 (275)
T ss_pred             cChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCcccc-ch--H-HHHHHH----HcCCc------CCCCCCCCCHHHHH
Confidence            57888877778889999999999999998 66676532 11  0 111100    00000      00112223457899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhh
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLE  103 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~  103 (145)
                      ++.+||..+|.+||++.+++..|.
T Consensus       251 ~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         251 LMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             HHHHHcCCCcccCCCHHHHHHHhc
Confidence            999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.29  E-value=4e-12  Score=88.76  Aligned_cols=100  Identities=12%  Similarity=0.040  Sum_probs=60.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHH---HHH---HHhHhhhhhCcch-------
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVY---NCF---IAKELNKLVGEDE-------   67 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~-------   67 (145)
                      +|||++.+..++.++|+||+|++++++++|+.||.................   ...   ....+........       
T Consensus       192 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (364)
T cd07875         192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSF  271 (364)
T ss_pred             CCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCCh
Confidence            589999888899999999999999999999999865421111111100000   000   0000000000000       


Q ss_pred             -------------hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 -------------EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 -------------~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                                   .........+.+|+.+|++.||.+|||+.+++.
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~  317 (364)
T cd07875         272 EKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  317 (364)
T ss_pred             HhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence                         001112346789999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.29  E-value=3.5e-12  Score=86.37  Aligned_cols=99  Identities=12%  Similarity=0.076  Sum_probs=59.4

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhH---------hhhhhCcc----
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKE---------LNKLVGED----   66 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~----   66 (145)
                      +|||++.+ ..++.++|+||+|++++++++|..||........ ...............         +....-+.    
T Consensus       170 ~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (288)
T cd07871         170 RPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEE-LHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQ  248 (288)
T ss_pred             cChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChHHhhccccchhhhccccCccCCC
Confidence            58998764 5678899999999999999999999865421111 111100000000000         00000000    


Q ss_pred             --hhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           67 --EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        67 --~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                        ............+|+.+|+..||.+|||+.+++.
T Consensus       249 ~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         249 PLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             chHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence              0001122446789999999999999999999864

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.29  E-value=3.2e-12  Score=86.23  Aligned_cols=88  Identities=14%  Similarity=0.156  Sum_probs=57.7

Q ss_pred             CCCccccc-----CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHH
Q 032213            1 MSPEWQNS-----GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLE   75 (145)
Q Consensus         1 ~aPe~~~~-----~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (145)
                      +|||++..     ..++.++|+||+|++++++++|..|+........   +..          ...........+.....
T Consensus       191 ~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~---~~~----------~~~~~~~~~~~~~~~~~  257 (286)
T cd06638         191 MAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA---LFK----------IPRNPPPTLHQPELWSN  257 (286)
T ss_pred             cChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH---Hhh----------ccccCCCcccCCCCcCH
Confidence            57887742     3477899999999999999999998864311110   000          00000000111112244


Q ss_pred             HHHHHHHhcccCCCCCCCCHHHHHHH
Q 032213           76 TMVRVRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        76 ~~~~l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      .+.+++.+||+.+|++||++.+++..
T Consensus       258 ~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         258 EFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             HHHHHHHHHccCCcccCCCHHHHhhc
Confidence            68899999999999999999999764

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.29  E-value=6.1e-12  Score=83.41  Aligned_cols=87  Identities=29%  Similarity=0.434  Sum_probs=59.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||.+.+..++.++|+|++|++++++++ |..|+... ..   ..+......           ......+...+..+.+
T Consensus       171 ~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~-~~---~~~~~~~~~-----------~~~~~~~~~~~~~~~~  235 (258)
T smart00219      171 MAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM-SN---EEVLEYLKK-----------GYRLPKPENCPPEIYK  235 (258)
T ss_pred             cChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-CH---HHHHHHHhc-----------CCCCCCCCcCCHHHHH
Confidence            47888877788999999999999999998 66666532 11   111111000           0011122234567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHh
Q 032213           80 VRLLCIQDEPNLRPSMKNVILML  102 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L  102 (145)
                      ++.+||..+|.+||++.+++..|
T Consensus       236 ~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      236 LMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHHHHCcCChhhCcCHHHHHhhC
Confidence            99999999999999999998754

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.29  E-value=6.4e-12  Score=84.86  Aligned_cols=87  Identities=17%  Similarity=0.229  Sum_probs=59.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ++||++.+..++.++|+|+||++++++++|..|+..... ...  ....     ....   .  .....+...+..+.++
T Consensus       183 ~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~-~~~--~~~~-----~~~~---~--~~~~~~~~~~~~l~~l  249 (286)
T cd06614         183 MAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP-LRA--LFLI-----TTKG---I--PPLKNPEKWSPEFKDF  249 (286)
T ss_pred             CCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCH-HHH--HHHH-----HhcC---C--CCCcchhhCCHHHHHH
Confidence            478888777788999999999999999999998764311 110  0000     0000   0  0011112235568899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||+.+|.+||++.+++.
T Consensus       250 i~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         250 LNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             HHHHhccChhhCcCHHHHhh
Confidence            99999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.29  E-value=6.6e-12  Score=84.60  Aligned_cols=99  Identities=13%  Similarity=0.047  Sum_probs=60.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHh-------hhhhCcch-----h
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKEL-------NKLVGEDE-----E   68 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~-----~   68 (145)
                      ++||++.+..++.++|+|+||++++++++|..++...........+...... .....+       ........     .
T Consensus       173 ~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (287)
T cd07838         173 RAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGL-PSEEEWPRNVSLPRSSFPSYTPRSFKS  251 (287)
T ss_pred             cChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCC-CChHhcCCCcccchhhcccccccchhh
Confidence            4789888888899999999999999999998877643111111111110000 000000       00000000     1


Q ss_pred             hcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           69 VDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        69 ~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ........+.+++.+||..+|.+||++.+++.
T Consensus       252 ~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         252 FVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             hhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence            12234566789999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.28  E-value=4.7e-12  Score=86.12  Aligned_cols=88  Identities=14%  Similarity=0.187  Sum_probs=60.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+|+||++++|+++|..|+.... ......   .         +.................+.++
T Consensus       184 ~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~-~~~~~~---~---------~~~~~~~~~~~~~~~~~~l~~~  250 (297)
T cd06659         184 MAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDS-PVQAMK---R---------LRDSPPPKLKNAHKISPVLRDF  250 (297)
T ss_pred             cCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHH---H---------HhccCCCCccccCCCCHHHHHH
Confidence            57898887788999999999999999999999986431 111100   0         0000000001111224457899


Q ss_pred             HHhcccCCCCCCCCHHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      +.+||+.+|.+||++.++++.
T Consensus       251 i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         251 LERMLTREPQERATAQELLDH  271 (297)
T ss_pred             HHHHhcCCcccCcCHHHHhhC
Confidence            999999999999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.28  E-value=1.2e-11  Score=83.38  Aligned_cols=100  Identities=17%  Similarity=0.133  Sum_probs=57.9

Q ss_pred             CCCcccccCC-cccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHH-------HH-HHhHhhhhh----Ccch
Q 032213            1 MSPEWQNSGL-ITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYN-------CF-IAKELNKLV----GEDE   67 (145)
Q Consensus         1 ~aPe~~~~~~-~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~----~~~~   67 (145)
                      +|||++.+.. ++.++|+|+||++++++++|+.|+..................       .. ........+    ....
T Consensus       167 ~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (284)
T cd07860         167 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDF  246 (284)
T ss_pred             cCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCH
Confidence            5789876544 578899999999999999999988643111111111110000       00 000000000    0000


Q ss_pred             -hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 -EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 -~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                       .........+.+++.+||..||.+||++.+++.
T Consensus       247 ~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         247 SKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             HHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence             011122445789999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.28  E-value=4.8e-12  Score=85.33  Aligned_cols=100  Identities=14%  Similarity=0.199  Sum_probs=58.1

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHH-------HHHHhHh-hhhhCcch----
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYN-------CFIAKEL-NKLVGEDE----   67 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~~~~~----   67 (145)
                      +|||++.+ ..++.++|+||||++++++++|..++...........+......       ......+ .....+..    
T Consensus       167 ~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (286)
T cd07846         167 RAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIE  246 (286)
T ss_pred             cCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcc
Confidence            47888764 34678899999999999999998877543111111111100000       0000000 00000000    


Q ss_pred             ---hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 ---EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 ---~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                         .........+.+++.+||..+|.+||++.+++.
T Consensus       247 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         247 PLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             hHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence               011123556899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.28  E-value=7.1e-12  Score=84.47  Aligned_cols=100  Identities=12%  Similarity=0.076  Sum_probs=58.2

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHH-------HHH-HHhHhhhhhCc----ch
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVY-------NCF-IAKELNKLVGE----DE   67 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~~~~----~~   67 (145)
                      +|||++.+ ..++.++|+||+|++++++++|+.|+.................       ... .........+.    ..
T Consensus       168 ~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
T cd07861         168 RAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSL  247 (285)
T ss_pred             cChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchh
Confidence            57898764 3468899999999999999999988864311111111100000       000 00000000000    00


Q ss_pred             -hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 -EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 -~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                       .........+.+++.+||..||.+||++.+|+.
T Consensus       248 ~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         248 RSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             HHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence             011123456789999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.28  E-value=8.5e-12  Score=85.95  Aligned_cols=100  Identities=22%  Similarity=0.290  Sum_probs=60.2

Q ss_pred             CCCcccccC--CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHH-------------HHHHHHH---------
Q 032213            1 MSPEWQNSG--LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTW-------------VYNCFIA---------   56 (145)
Q Consensus         1 ~aPe~~~~~--~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~-------------~~~~~~~---------   56 (145)
                      |+||++.+.  .++.++|+|++|++++++++|..|+...............             .......         
T Consensus       175 ~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (328)
T cd08226         175 LSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGI  254 (328)
T ss_pred             cChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhccc
Confidence            578988653  4678999999999999999999998644211111100000             0000000         


Q ss_pred             --hHhh-----hhhCcc--hhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           57 --KELN-----KLVGED--EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        57 --~~~~-----~~~~~~--~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                        ....     .+....  .+.+......+.+|+.+||..+|.+|||+.+++.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~  307 (328)
T cd08226         255 GESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS  307 (328)
T ss_pred             ccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence              0000     000000  1122334667899999999999999999999975

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.28  E-value=2.3e-12  Score=88.85  Aligned_cols=87  Identities=15%  Similarity=0.252  Sum_probs=57.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchh-hHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTAD-VVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++++++|..||........ ......+...        .+.......|......+.+
T Consensus       163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~--------~i~~~~~~~p~~~~~~~~~  234 (329)
T cd05618         163 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ--------VILEKQIRIPRSLSVKAAS  234 (329)
T ss_pred             cCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHH--------HHhcCCCCCCCCCCHHHHH
Confidence            589999888889999999999999999999999853211100 0000011100        1111122233344566889


Q ss_pred             HHHhcccCCCCCCCCH
Q 032213           80 VRLLCIQDEPNLRPSM   95 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~   95 (145)
                      ++.+||..+|.+|+++
T Consensus       235 ll~~~L~~dP~~R~~~  250 (329)
T cd05618         235 VLKSFLNKDPKERLGC  250 (329)
T ss_pred             HHHHHhcCCHHHcCCC
Confidence            9999999999999983

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.27  E-value=5.8e-12  Score=84.87  Aligned_cols=100  Identities=16%  Similarity=0.120  Sum_probs=58.6

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHH-------H-HHHhHhhhhhC----cch
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYN-------C-FIAKELNKLVG----EDE   67 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~----~~~   67 (145)
                      +|||++.+. .++.++|+|+||++++++++|..|+..................       . .........+.    ...
T Consensus       166 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (283)
T cd07835         166 RAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDL  245 (283)
T ss_pred             CCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccch
Confidence            579987654 4688999999999999999999888643111111111110000       0 00000000000    000


Q ss_pred             -hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 -EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 -~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                       .........+.+++.+||+.+|.+||++.+++.
T Consensus       246 ~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         246 SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence             111122356889999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.27  E-value=6.8e-12  Score=82.72  Aligned_cols=87  Identities=16%  Similarity=0.260  Sum_probs=58.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ++||++.+..++.++|+|+||++++++++|..|+......... ..            ...........+......+.++
T Consensus       164 ~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-~~------------~~~~~~~~~~~~~~~~~~~~~~  230 (253)
T cd05122         164 MAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKAL-FK------------IATNGPPGLRNPEKWSDEFKDF  230 (253)
T ss_pred             cCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHH-HH------------HHhcCCCCcCcccccCHHHHHH
Confidence            4788888777889999999999999999999887643111000 00            0000001111111124568999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.+++.
T Consensus       231 i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         231 LKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             HHHHccCChhhCCCHHHHhc
Confidence            99999999999999999875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.27  E-value=7.4e-12  Score=85.54  Aligned_cols=100  Identities=21%  Similarity=0.245  Sum_probs=59.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHH---------------------HHhHh
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCF---------------------IAKEL   59 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~   59 (145)
                      +|||++.+..++.++|+|+||++++++++|..|+.... ...............                     .....
T Consensus       165 ~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (308)
T cd06615         165 MSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPD-AKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELL  243 (308)
T ss_pred             cChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcc-hhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHH
Confidence            47898877778899999999999999999999875331 111100000000000                     00000


Q ss_pred             hhhhCcc-hhhc-HHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 032213           60 NKLVGED-EEVD-LRTLETMVRVRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        60 ~~~~~~~-~~~~-~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      ..+.... +..+ ......+.+++.+||..+|++||++.+++..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         244 DYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             HHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            0000000 0000 0134468899999999999999999999764

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.27  E-value=5.5e-12  Score=85.31  Aligned_cols=88  Identities=20%  Similarity=0.265  Sum_probs=59.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..|+................      ....      ...+......+.+|
T Consensus       168 ~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~------~~~~------~~~~~~~~~~~~~l  235 (285)
T cd05630         168 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV------KEVQ------EEYSEKFSPDARSL  235 (285)
T ss_pred             cChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhh------hhhh------hhcCccCCHHHHHH
Confidence            58999988889999999999999999999999987532111100000000      0000      01122234557899


Q ss_pred             HHhcccCCCCCCCC-----HHHHHH
Q 032213           81 RLLCIQDEPNLRPS-----MKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt-----~~~v~~  100 (145)
                      +..||+.+|.+||+     +.+++.
T Consensus       236 i~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         236 CKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             HHHHhhcCHHHccCCCCCchHHHHc
Confidence            99999999999999     778775

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.27  E-value=4.4e-12  Score=94.85  Aligned_cols=85  Identities=15%  Similarity=0.192  Sum_probs=60.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcch---hhcHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDE---EVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~   77 (145)
                      ||||++.+..++.++|||+|||++||+++|..||......    .+..            .++....   .........+
T Consensus       547 ~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~----~~~~------------~il~~~~~~p~~~~~~~~~~  610 (669)
T cd05610         547 LAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQ----QVFQ------------NILNRDIPWPEGEEKLSVNA  610 (669)
T ss_pred             cCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH----HHHH------------HHHhcCCCCCcccccCCHHH
Confidence            6899998888999999999999999999999998643111    1110            0111100   1111234557


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHHH
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      .+++.+||..+|.+||++.+++..
T Consensus       611 ~~~l~~lL~~dP~~R~ta~e~l~h  634 (669)
T cd05610         611 QNAIEILLTMDPTKRAGLKELKQH  634 (669)
T ss_pred             HHHHHHHcccChhHCcCHHHHHhC
Confidence            889999999999999999999873

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.27  E-value=1.1e-11  Score=82.75  Aligned_cols=85  Identities=18%  Similarity=0.184  Sum_probs=58.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||||++++++++|..|+........   ...         ..  ........+......+.++
T Consensus       176 ~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~---~~~---------~~--~~~~~~~~~~~~~~~~~~~  241 (265)
T cd06652         176 MSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA---IFK---------IA--TQPTNPVLPPHVSDHCRDF  241 (265)
T ss_pred             cChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH---HHH---------Hh--cCCCCCCCchhhCHHHHHH
Confidence            578988777788999999999999999999999864311100   000         00  0001112344455678889


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||. +|..||++.+++.
T Consensus       242 i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         242 LKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             HHHHhc-ChhhCCCHHHHhc
Confidence            999995 8999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.27  E-value=1.7e-11  Score=86.56  Aligned_cols=101  Identities=15%  Similarity=0.182  Sum_probs=61.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHH-------------HhHhhhhh---C
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFI-------------AKELNKLV---G   64 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~---~   64 (145)
                      +|||++.+..++.++|+||+||+++|+++|+.|+...........+..-......             ...+....   .
T Consensus       254 ~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (392)
T PHA03207        254 NSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLR  333 (392)
T ss_pred             cCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhccccc
Confidence            5899998888999999999999999999999998654222111111110000000             00000000   0


Q ss_pred             cchhhc-----HHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 032213           65 EDEEVD-----LRTLETMVRVRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        65 ~~~~~~-----~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      +....+     ......+.+++.+||..+|.+||++.+++..
T Consensus       334 ~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        334 PPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             CCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence            000000     0123457789999999999999999999864

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.27  E-value=1.2e-12  Score=90.17  Aligned_cols=82  Identities=15%  Similarity=0.139  Sum_probs=58.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++|+||+|++++++++|..||.... .   ......            +.......+......+.++
T Consensus       163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-~---~~~~~~------------i~~~~~~~~~~~~~~~~~l  226 (325)
T cd05602         163 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN-T---AEMYDN------------ILNKPLQLKPNITNSARHL  226 (325)
T ss_pred             cCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC-H---HHHHHH------------HHhCCcCCCCCCCHHHHHH
Confidence            68999988889999999999999999999999986431 1   111111            1111111222345568899


Q ss_pred             HHhcccCCCCCCCCHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNV   98 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v   98 (145)
                      +.+||+.+|.+|+++.+.
T Consensus       227 i~~~l~~~p~~R~~~~~~  244 (325)
T cd05602         227 LEGLLQKDRTKRLGAKDD  244 (325)
T ss_pred             HHHHcccCHHHCCCCCCC
Confidence            999999999999987643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.27  E-value=1.3e-11  Score=82.17  Aligned_cols=85  Identities=24%  Similarity=0.382  Sum_probs=59.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ++||+..+..++.++|+|+||++++++++|..|+....    .......         .  ........+......+.++
T Consensus       172 ~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~----~~~~~~~---------~--~~~~~~~~~~~~~~~~~~l  236 (260)
T cd08222         172 MSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN----FLSVVLR---------I--VEGPTPSLPETYSRQLNSI  236 (260)
T ss_pred             cCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc----HHHHHHH---------H--HcCCCCCCcchhcHHHHHH
Confidence            46787766677889999999999999999998875331    1111000         0  0011112233445678999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.+++.
T Consensus       237 i~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         237 MQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             HHHHhcCChhhCcCHHHHhh
Confidence            99999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.27  E-value=7.6e-12  Score=84.95  Aligned_cols=89  Identities=17%  Similarity=0.306  Sum_probs=57.9

Q ss_pred             CCCcccccCC----cccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHH
Q 032213            1 MSPEWQNSGL----ITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLET   76 (145)
Q Consensus         1 ~aPe~~~~~~----~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (145)
                      +|||++.+..    ++.++|+||||++++++++|+.|+...  ......+. ..        +... ....+........
T Consensus       181 ~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~--~~~~~~~~-~~--------~~~~-~~~~~~~~~~~~~  248 (296)
T cd06618         181 MAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNC--KTEFEVLT-KI--------LQEE-PPSLPPNEGFSPD  248 (296)
T ss_pred             cCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcc--hhHHHHHH-HH--------hcCC-CCCCCCCCCCCHH
Confidence            4788876443    778999999999999999999998642  11110000 00        0000 0001111123456


Q ss_pred             HHHHHHhcccCCCCCCCCHHHHHHH
Q 032213           77 MVRVRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        77 ~~~l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      +.+++.+||..+|.+||++.+++..
T Consensus       249 l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         249 FCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             HHHHHHHHccCChhhCCCHHHHhcC
Confidence            8999999999999999999999753

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.26  E-value=1.3e-12  Score=89.77  Aligned_cols=80  Identities=15%  Similarity=0.151  Sum_probs=57.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||||++++++++|..||... ..   ..+..            .+.......+......+.++
T Consensus       163 ~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~-~~---~~~~~------------~i~~~~~~~~~~~~~~~~~l  226 (323)
T cd05575         163 LAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR-DT---AEMYD------------NILNKPLRLKPNISVSARHL  226 (323)
T ss_pred             cChhhhcCCCCCccccccccchhhhhhhcCCCCCCCC-CH---HHHHH------------HHHcCCCCCCCCCCHHHHHH
Confidence            6899998888999999999999999999999998643 11   11110            01111111122235668999


Q ss_pred             HHhcccCCCCCCCCHH
Q 032213           81 RLLCIQDEPNLRPSMK   96 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~   96 (145)
                      +.+||+.+|.+||++.
T Consensus       227 i~~~l~~~p~~R~~~~  242 (323)
T cd05575         227 LEGLLQKDRTKRLGAK  242 (323)
T ss_pred             HHHHhhcCHHhCCCCC
Confidence            9999999999999874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.26  E-value=5.5e-12  Score=86.34  Aligned_cols=84  Identities=11%  Similarity=0.168  Sum_probs=59.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcch--hhcHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDE--EVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   78 (145)
                      +|||++.+..++.++|+||||++++++++|..|+........   +             ..+.....  +........+.
T Consensus       199 ~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~---~-------------~~~~~~~~~~~~~~~~~~~~~  262 (316)
T cd05574         199 IAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET---F-------------SNILKKEVTFPGSPPVSSSAR  262 (316)
T ss_pred             cCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH---H-------------HHHhcCCccCCCccccCHHHH
Confidence            578888877888999999999999999999999864311100   0             00111111  11111456789


Q ss_pred             HHHHhcccCCCCCCCC----HHHHHH
Q 032213           79 RVRLLCIQDEPNLRPS----MKNVIL  100 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt----~~~v~~  100 (145)
                      +++.+||..+|..||+    +.+++.
T Consensus       263 ~li~~~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         263 DLIRKLLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             HHHHHHccCCHhHCCCchhhHHHHHc
Confidence            9999999999999999    777665

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.26  E-value=9.2e-12  Score=83.48  Aligned_cols=88  Identities=15%  Similarity=0.135  Sum_probs=60.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..|+...  .........+..          ........+......+.++
T Consensus       173 ~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~--~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l  240 (267)
T PHA03390        173 FSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKED--EDEELDLESLLK----------RQQKKLPFIKNVSKNANDF  240 (267)
T ss_pred             cChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCC--CcchhhHHHHHH----------hhcccCCcccccCHHHHHH
Confidence            5899998888899999999999999999999998633  111111111100          0111112223445678999


Q ss_pred             HHhcccCCCCCCCC-HHHHHH
Q 032213           81 RLLCIQDEPNLRPS-MKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt-~~~v~~  100 (145)
                      +.+||+.+|.+|++ +.+++.
T Consensus       241 i~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        241 VQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             HHHHhccChhhCCchHHHHhc
Confidence            99999999999996 588763

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.26  E-value=2.9e-12  Score=86.98  Aligned_cols=88  Identities=16%  Similarity=0.181  Sum_probs=60.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ++||++....++.++|+|+||++++++++|..||........ ....      ....      .+....+......+.++
T Consensus       182 ~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-~~~~------~~~~------~~~~~~~~~~~~~l~~l  248 (293)
T cd06647         182 MAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LYLI------ATNG------TPELQNPEKLSAIFRDF  248 (293)
T ss_pred             cCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-eeeh------hcCC------CCCCCCccccCHHHHHH
Confidence            478888777788999999999999999999999864311100 0000      0000      00011122334568899


Q ss_pred             HHhcccCCCCCCCCHHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      +.+||..+|.+||++.+++..
T Consensus       249 i~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         249 LNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             HHHHccCChhhCcCHHHHhcC
Confidence            999999999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.26  E-value=6.2e-13  Score=91.48  Aligned_cols=84  Identities=18%  Similarity=0.245  Sum_probs=60.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++|+||||++++++++|..||... ....   ...            .+.......+......+.++
T Consensus       163 ~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~-~~~~---~~~------------~i~~~~~~~p~~~~~~~~~l  226 (325)
T cd05594         163 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-DHEK---LFE------------LILMEEIRFPRTLSPEAKSL  226 (325)
T ss_pred             CCHHHHccCCCCCccccccccceeeeeccCCCCCCCC-CHHH---HHH------------HHhcCCCCCCCCCCHHHHHH
Confidence            6899998888999999999999999999999998643 1111   100            01111111223345568899


Q ss_pred             HHhcccCCCCCCC-----CHHHHHH
Q 032213           81 RLLCIQDEPNLRP-----SMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rp-----t~~~v~~  100 (145)
                      +.+||..+|.+|+     ++.+++.
T Consensus       227 i~~~L~~dP~~R~~~~~~~~~~il~  251 (325)
T cd05594         227 LSGLLKKDPKQRLGGGPDDAKEIMQ  251 (325)
T ss_pred             HHHHhhcCHHHhCCCCCCCHHHHhc
Confidence            9999999999996     8888875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.26  E-value=1.2e-11  Score=83.16  Aligned_cols=96  Identities=17%  Similarity=0.166  Sum_probs=58.8

Q ss_pred             CCCcccc-cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHH--hHhh-hh---------hCc--
Q 032213            1 MSPEWQN-SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIA--KELN-KL---------VGE--   65 (145)
Q Consensus         1 ~aPe~~~-~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~---------~~~--   65 (145)
                      +|||++. ++.++.++|+||+|++++|+++|..|+..... ..   ...........  ..+. ..         ...  
T Consensus       165 ~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (282)
T cd07831         165 RAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNE-LD---QIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKK  240 (282)
T ss_pred             CChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCH-HH---HHHHHHHHcCCCCHHHHHhhcccccccccCcccc
Confidence            5788765 34568899999999999999999988864311 11   11111000000  0000 00         000  


Q ss_pred             --ch-hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           66 --DE-EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        66 --~~-~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                        .. ......+..+.+++.+||..+|.+||++.+++.
T Consensus       241 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         241 GTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             cccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence              00 111234677899999999999999999999875

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.26  E-value=7.1e-12  Score=83.77  Aligned_cols=89  Identities=12%  Similarity=0.226  Sum_probs=56.7

Q ss_pred             CCCcccc---cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHH
Q 032213            1 MSPEWQN---SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~---~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (145)
                      +|||++.   ...++.++|+||+|++++++++|..|+........ ....       ....   ...............+
T Consensus       173 ~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~-~~~~-------~~~~---~~~~~~~~~~~~~~~~  241 (267)
T cd06645         173 MAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-LFLM-------TKSN---FQPPKLKDKMKWSNSF  241 (267)
T ss_pred             cChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh-HHhh-------hccC---CCCCcccccCCCCHHH
Confidence            5788864   44578899999999999999999988754311110 0000       0000   0001000011123457


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHH
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+++.+||..+|.+||++.+++.
T Consensus       242 ~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         242 HHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             HHHHHHHccCCchhCcCHHHHhc
Confidence            89999999999999999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.26  E-value=4.6e-12  Score=86.59  Aligned_cols=88  Identities=18%  Similarity=0.172  Sum_probs=57.9

Q ss_pred             CCCcccc---cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHH
Q 032213            1 MSPEWQN---SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~---~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (145)
                      +|||++.   ...++.++|+||||++++++++|..|+.............        ..    .. +. .........+
T Consensus       178 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~--------~~----~~-~~-~~~~~~~~~~  243 (308)
T cd06634         178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA--------QN----ES-PA-LQSGHWSEYF  243 (308)
T ss_pred             cCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHh--------hc----CC-CC-cCcccccHHH
Confidence            4788764   3457789999999999999999998875431110000000        00    00 00 0112335568


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHHHh
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVILML  102 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~~L  102 (145)
                      .+++.+||..+|.+||++.+++...
T Consensus       244 ~~li~~cl~~~P~~Rp~~~~ll~~~  268 (308)
T cd06634         244 RNFVDSCLQKIPQDRPTSEVLLKHR  268 (308)
T ss_pred             HHHHHHHhhCCcccCCCHHHHhhCc
Confidence            8999999999999999999998653

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.26  E-value=4.6e-12  Score=88.73  Aligned_cols=99  Identities=15%  Similarity=0.157  Sum_probs=59.3

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHH-------HhHhhh-hh----Ccc-
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFI-------AKELNK-LV----GED-   66 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~----~~~-   66 (145)
                      +|||++.+. .++.++|+||+|++++||++|+.||...... .....+........       ...... +.    ... 
T Consensus       171 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (372)
T cd07853         171 RAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI-QQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPS  249 (372)
T ss_pred             CCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH-HHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCc
Confidence            578887653 4788999999999999999999998754221 11111110000000       000000 00    000 


Q ss_pred             h----hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           67 E----EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        67 ~----~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .    .........+.+|+.+||+.||.+||++.+++.
T Consensus       250 ~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  287 (372)
T cd07853         250 LPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA  287 (372)
T ss_pred             hHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence            0    011112456789999999999999999999986

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.26  E-value=3.2e-12  Score=88.61  Aligned_cols=84  Identities=15%  Similarity=0.088  Sum_probs=59.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++|+||+||+++||++|..||......    ....            .+.......+......+.++
T Consensus       195 ~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~----~~~~------------~i~~~~~~~p~~~~~~~~~l  258 (340)
T PTZ00426        195 IAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL----LIYQ------------KILEGIIYFPKFLDNNCKHL  258 (340)
T ss_pred             cCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH----HHHH------------HHhcCCCCCCCCCCHHHHHH
Confidence            6899998888899999999999999999999998743110    0000            01111111222334567899


Q ss_pred             HHhcccCCCCCCC-----CHHHHHH
Q 032213           81 RLLCIQDEPNLRP-----SMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rp-----t~~~v~~  100 (145)
                      +.+||..+|.+|+     ++.+++.
T Consensus       259 i~~~l~~dp~~R~~~~~~~~~~~~~  283 (340)
T PTZ00426        259 MKKLLSHDLTKRYGNLKKGAQNVKE  283 (340)
T ss_pred             HHHHcccCHHHcCCCCCCCHHHHHc
Confidence            9999999999995     8888875

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.26  E-value=7.8e-12  Score=84.16  Aligned_cols=87  Identities=17%  Similarity=0.260  Sum_probs=57.6

Q ss_pred             CCCcccc-----cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHH
Q 032213            1 MSPEWQN-----SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLE   75 (145)
Q Consensus         1 ~aPe~~~-----~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (145)
                      ++||++.     ...++.++|+|++|++++++++|..|+...... .  .+..          +.....+....+.....
T Consensus       170 ~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~-~--~~~~----------~~~~~~~~~~~~~~~~~  236 (280)
T cd06611         170 MAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM-R--VLLK----------ILKSEPPTLDQPSKWSS  236 (280)
T ss_pred             cCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH-H--HHHH----------HhcCCCCCcCCcccCCH
Confidence            4677764     234677899999999999999999998643111 0  0000          00000111122333455


Q ss_pred             HHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           76 TMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        76 ~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+.+++.+||..+|.+||++.+++.
T Consensus       237 ~~~~li~~~l~~~p~~Rps~~~il~  261 (280)
T cd06611         237 SFNDFLKSCLVKDPDDRPTAAELLK  261 (280)
T ss_pred             HHHHHHHHHhccChhhCcCHHHHhc
Confidence            7889999999999999999999975

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.26  E-value=6.1e-12  Score=85.79  Aligned_cols=91  Identities=14%  Similarity=0.076  Sum_probs=60.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++....++.++|+||||++++|+++|..|+... ...   .+...    ....   ....+  ......+..+.++
T Consensus       183 ~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~-~~~---~~~~~----~~~~---~~~~~--~~~~~~~~~~~~l  249 (305)
T cd05609         183 IAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD-TPE---ELFGQ----VISD---DIEWP--EGDEALPADAQDL  249 (305)
T ss_pred             cCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHH---HHHHH----HHhc---ccCCC--CccccCCHHHHHH
Confidence            4788887778899999999999999999999998643 111   11100    0000   00000  0111234568999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhc
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEG  104 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~  104 (145)
                      +.+||+.+|.+||++..+.+.|+.
T Consensus       250 i~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         250 ISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             HHHHhccChhhccCccCHHHHHhC
Confidence            999999999999997766666665

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.26  E-value=2.9e-12  Score=88.42  Aligned_cols=91  Identities=16%  Similarity=0.200  Sum_probs=61.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCc-chh-hcHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGE-DEE-VDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~   78 (145)
                      +|||++.+..++.++|+||+|++++||++|..|+...........+..+          ...... ... ........+.
T Consensus       165 ~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~----------~~~~~~~~~~~~~~~~s~~~~  234 (333)
T cd05600         165 MAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYW----------KETLQRPVYDDPRFNLSDEAW  234 (333)
T ss_pred             cChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhc----------cccccCCCCCccccccCHHHH
Confidence            5899998888999999999999999999999998643111111111100          000100 000 0012355688


Q ss_pred             HHHHhcccCCCCCCCCHHHHHHH
Q 032213           79 RVRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      +++.+||..+|.+||++.+++..
T Consensus       235 ~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         235 DLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             HHHHHHhhChhhhcCCHHHHHhC
Confidence            99999999999999999999863

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.26  E-value=4.4e-12  Score=86.25  Aligned_cols=87  Identities=17%  Similarity=0.213  Sum_probs=59.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ++||++.+..++.++|+|+||++++++++|..|+.............             ..-.+....+......+.++
T Consensus       182 ~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l  248 (297)
T cd06656         182 MAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA-------------TNGTPELQNPERLSAVFRDF  248 (297)
T ss_pred             cCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeec-------------cCCCCCCCCccccCHHHHHH
Confidence            46888877778899999999999999999999986431111000000             00001111222334567899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.+++.
T Consensus       249 i~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         249 LNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             HHHHccCChhhCcCHHHHhc
Confidence            99999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.26  E-value=8.7e-12  Score=92.16  Aligned_cols=93  Identities=18%  Similarity=0.211  Sum_probs=69.4

Q ss_pred             CCcccc---cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcch--hhcHHHHHH
Q 032213            2 SPEWQN---SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDE--EVDLRTLET   76 (145)
Q Consensus         2 aPe~~~---~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~   76 (145)
                      +||++.   +...++|+|||++||++|-|++...||......    .                |+...-  +..+.....
T Consensus       223 sPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l----a----------------Ilng~Y~~P~~p~ys~~  282 (738)
T KOG1989|consen  223 SPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL----A----------------ILNGNYSFPPFPNYSDR  282 (738)
T ss_pred             ChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce----e----------------EEeccccCCCCccHHHH
Confidence            688774   667899999999999999999999999743111    1                111111  112345777


Q ss_pred             HHHHHHhcccCCCCCCCCHHHHHHHhhccCCCCCCCCC
Q 032213           77 MVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVPFP  114 (145)
Q Consensus        77 ~~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~~~~~~~  114 (145)
                      +..|+..||+.+|++||++-+|+..+.++...+.+...
T Consensus       283 l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~~~  320 (738)
T KOG1989|consen  283 LKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPIPD  320 (738)
T ss_pred             HHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCccc
Confidence            99999999999999999999999998888776544433

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.25  E-value=1e-11  Score=84.85  Aligned_cols=99  Identities=13%  Similarity=0.095  Sum_probs=59.3

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhh---------Ccc----
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLV---------GED----   66 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~----   66 (145)
                      +|||++.+ ..++.++|+||+|++++++++|..||..... ..................+..+.         .+.    
T Consensus       171 ~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (309)
T cd07872         171 RPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTV-EDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQ  249 (309)
T ss_pred             cCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCC
Confidence            57898764 4578899999999999999999999864411 11111111100000000000000         000    


Q ss_pred             --hhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           67 --EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        67 --~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                        ..........+.+++.+||..+|.+|||+.+++.
T Consensus       250 ~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         250 PLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             chhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence              0011123456789999999999999999999986

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.25  E-value=7.3e-12  Score=86.54  Aligned_cols=104  Identities=16%  Similarity=0.142  Sum_probs=60.9

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhC-------------cc
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVG-------------ED   66 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~   66 (145)
                      +|||++.+ ..++.++|+||+|++++++++|+.|+...........+.... .......+..+..             ..
T Consensus       176 ~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (336)
T cd07849         176 RAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVL-GTPSQEDLNCIISLRARNYIKSLPFKPK  254 (336)
T ss_pred             cChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc-CCCCHHHHHHhhchhhhhHHhhcCcCCc
Confidence            57887653 457889999999999999999998885431111000000000 0000000000000             00


Q ss_pred             hh---hcHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH--hhcc
Q 032213           67 EE---VDLRTLETMVRVRLLCIQDEPNLRPSMKNVILM--LEGT  105 (145)
Q Consensus        67 ~~---~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~--L~~~  105 (145)
                      .+   ........+.+++.+||+.+|.+||++.+++..  ++..
T Consensus       255 ~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~  298 (336)
T cd07849         255 VPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQY  298 (336)
T ss_pred             ccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence            00   011224568899999999999999999999874  5544

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.25  E-value=2.1e-11  Score=81.00  Aligned_cols=91  Identities=21%  Similarity=0.357  Sum_probs=60.1

Q ss_pred             CCCcccc-cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQN-SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~-~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++. +..++.++|+|++|++++++++|..|+... ..............    .    ...............+.+
T Consensus       165 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~-~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~l~~  235 (260)
T PF00069_consen  165 MAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES-NSDDQLEIIEKILK----R----PLPSSSQQSREKSEELRD  235 (260)
T ss_dssp             SCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS-SHHHHHHHHHHHHH----T----HHHHHTTSHTTSHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccc-cchhhhhhhhhccc----c----cccccccccchhHHHHHH
Confidence            4789887 778899999999999999999999888743 11111111111000    0    000000001111367999


Q ss_pred             HHHhcccCCCCCCCCHHHHHH
Q 032213           80 VRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ++..||+.+|.+||++.+++.
T Consensus       236 li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  236 LIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HHHHHSSSSGGGSTTHHHHHT
T ss_pred             HHHHHccCChhHCcCHHHHhc
Confidence            999999999999999999874

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.25  E-value=1.3e-11  Score=82.12  Aligned_cols=88  Identities=22%  Similarity=0.305  Sum_probs=61.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHH-HHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLR-TLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   79 (145)
                      ++||++....++.++|+|+||++++++++|..|+..... ...........         .  ......+.. .+..+.+
T Consensus       167 ~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~-~~~~~~~~~~~---------~--~~~~~~~~~~~~~~l~~  234 (264)
T cd06623         167 MSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ-PSFFELMQAIC---------D--GPPPSLPAEEFSPEFRD  234 (264)
T ss_pred             cCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc-cCHHHHHHHHh---------c--CCCCCCCcccCCHHHHH
Confidence            478888877888999999999999999999999865411 01111111100         0  011112222 4567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHH
Q 032213           80 VRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ++.+||..+|.+||++.+++.
T Consensus       235 li~~~l~~~p~~R~~~~~ll~  255 (264)
T cd06623         235 FISACLQKDPKKRPSAAELLQ  255 (264)
T ss_pred             HHHHHccCChhhCCCHHHHHh
Confidence            999999999999999999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.25  E-value=1.2e-11  Score=84.57  Aligned_cols=36  Identities=19%  Similarity=0.357  Sum_probs=31.1

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCC
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEV   36 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~   36 (145)
                      +|||++.+ ..++.++|+||+|++++|+++|..||..
T Consensus       182 ~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~  218 (317)
T cd07867         182 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             cCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence            58998875 4578899999999999999999998864

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.25  E-value=1e-11  Score=83.95  Aligned_cols=93  Identities=16%  Similarity=0.169  Sum_probs=61.7

Q ss_pred             CCCcccccCC--cccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHH
Q 032213            1 MSPEWQNSGL--ITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~--~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (145)
                      ++||++.+..  .+.++|+|+||++++++++|..|+...........+...            +.......+......+.
T Consensus       173 ~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~  240 (288)
T cd05583         173 MAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRR------------ILKSKPPFPKTMSAEAR  240 (288)
T ss_pred             cCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHH------------HHccCCCCCcccCHHHH
Confidence            4678776544  678899999999999999999998533111111111110            11111122233345688


Q ss_pred             HHHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           79 RVRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      +++.+||+.+|++|||+.++...|+..
T Consensus       241 ~li~~~l~~~p~~R~t~~~~~~~l~~~  267 (288)
T cd05583         241 DFIQKLLEKDPKKRLGANGADEIKNHP  267 (288)
T ss_pred             HHHHHHhcCCHhhccCcchHHHHhcCc
Confidence            999999999999999999888777753

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.25  E-value=9.5e-12  Score=89.50  Aligned_cols=83  Identities=19%  Similarity=0.227  Sum_probs=62.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      .|||++....++.+.|+||+|+++|+|++|+.|+... +..  ..+...            +-..  ......+....+|
T Consensus       480 ~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~-P~~--~ei~~~------------i~~~--~~s~~vS~~AKdL  542 (612)
T KOG0603|consen  480 VAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAH-PAG--IEIHTR------------IQMP--KFSECVSDEAKDL  542 (612)
T ss_pred             cChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccC-Cch--HHHHHh------------hcCC--ccccccCHHHHHH
Confidence            4899999889999999999999999999999999865 211  111110            1000  0113346678999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +..||+.+|.+|+++.++..
T Consensus       543 l~~LL~~dP~~Rl~~~~i~~  562 (612)
T KOG0603|consen  543 LQQLLQVDPALRLGADEIGA  562 (612)
T ss_pred             HHHhccCChhhCcChhhhcc
Confidence            99999999999999999865

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.25  E-value=4.4e-12  Score=87.47  Aligned_cols=92  Identities=13%  Similarity=0.235  Sum_probs=60.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchh-hHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTAD-VVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+|++++++++|+.||........ ......+...        .+.......|......+.+
T Consensus       163 ~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~p~~~~~~~~~  234 (329)
T cd05588         163 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQ--------VILEKQIRIPRSLSVKASS  234 (329)
T ss_pred             cCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHH--------HHHcCCCCCCCCCCHHHHH
Confidence            589999888899999999999999999999999863211100 0000011100        1111112223334556889


Q ss_pred             HHHhcccCCCCCCCC------HHHHHH
Q 032213           80 VRLLCIQDEPNLRPS------MKNVIL  100 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt------~~~v~~  100 (145)
                      ++.+||..+|.+|++      +.+++.
T Consensus       235 li~~~L~~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05588         235 VLKGFLNKDPKERLGCHPQTGFRDIKS  261 (329)
T ss_pred             HHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence            999999999999997      566653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.25  E-value=8e-12  Score=95.12  Aligned_cols=83  Identities=29%  Similarity=0.404  Sum_probs=56.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++|||||||+++||+++..|+...   .  ..+....         ....++   ...........+
T Consensus       182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~---~--~~~~~~~---------~~~~~~---~~~~~~~~~~~~  244 (793)
T PLN00181        182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEK---S--RTMSSLR---------HRVLPP---QILLNWPKEASF  244 (793)
T ss_pred             EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhH---H--HHHHHHH---------HhhcCh---hhhhcCHHHHHH
Confidence            6899999889999999999999999999977664321   0  0000000         001111   011112335678


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||+.+|.+||++.+++.
T Consensus       245 ~~~~L~~~P~~Rps~~eil~  264 (793)
T PLN00181        245 CLWLLHPEPSCRPSMSELLQ  264 (793)
T ss_pred             HHHhCCCChhhCcChHHHhh
Confidence            88999999999999999976

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.25  E-value=1.8e-11  Score=81.09  Aligned_cols=85  Identities=22%  Similarity=0.275  Sum_probs=60.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ++||++.+..++.++|+|++|++++++++|..|+.... .   ..+....        .....   ...+......+.++
T Consensus       168 ~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~-~---~~~~~~~--------~~~~~---~~~~~~~~~~~~~l  232 (256)
T cd08530         168 MAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARS-M---QDLRYKV--------QRGKY---PPIPPIYSQDLQNF  232 (256)
T ss_pred             cCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-H---HHHHHHH--------hcCCC---CCCchhhCHHHHHH
Confidence            46888877778889999999999999999999986431 1   1111000        00001   11223445678999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.+++.
T Consensus       233 i~~~l~~~p~~Rp~~~~~l~  252 (256)
T cd08530         233 IRSMLQVKPKLRPNCDKILA  252 (256)
T ss_pred             HHHHcCCCcccCCCHHHHhc
Confidence            99999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.25  E-value=1e-11  Score=82.76  Aligned_cols=86  Identities=17%  Similarity=0.227  Sum_probs=60.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhh--CcchhhcHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLV--GEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~   78 (145)
                      ++||++....++.++|+|++|++++++++|..|+.....  ......            ..+.  ......+......+.
T Consensus       159 ~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~------------~~~~~~~~~~~~~~~~~~~~~  224 (262)
T cd05572         159 VAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE--DPMEIY------------NDILKGNGKLEFPNYIDKAAK  224 (262)
T ss_pred             cChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC--CHHHHH------------HHHhccCCCCCCCcccCHHHH
Confidence            578888777788999999999999999999999865421  011111            1111  111223333366789


Q ss_pred             HHHHhcccCCCCCCCC-----HHHHHH
Q 032213           79 RVRLLCIQDEPNLRPS-----MKNVIL  100 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt-----~~~v~~  100 (145)
                      .++.+||..+|.+|++     +.++++
T Consensus       225 ~~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         225 DLIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             HHHHHHccCChhhCcCCcccCHHHHhc
Confidence            9999999999999999     676654

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.24  E-value=1.5e-11  Score=84.24  Aligned_cols=36  Identities=19%  Similarity=0.357  Sum_probs=31.3

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCC
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEV   36 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~   36 (145)
                      +|||++.+ ..++.++|+||+|++++++++|..||..
T Consensus       182 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~  218 (317)
T cd07868         182 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             cCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence            68998875 4578899999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.24  E-value=4.8e-12  Score=90.79  Aligned_cols=92  Identities=22%  Similarity=0.311  Sum_probs=65.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh--CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcc-----hhhcHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC--CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGED-----EEVDLRT   73 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~   73 (145)
                      ||+|.+.-++|++++|+|+||+.+||+++  ...||.....  +  ..++         ....+++..     +..|+-+
T Consensus       706 mawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~--e--~vve---------n~~~~~~~~~~~~~l~~P~~c  772 (807)
T KOG1094|consen  706 MAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD--E--QVVE---------NAGEFFRDQGRQVVLSRPPAC  772 (807)
T ss_pred             hhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH--H--HHHH---------hhhhhcCCCCcceeccCCCcC
Confidence            68898888999999999999999999864  4556653211  0  0111         111122111     1346667


Q ss_pred             HHHHHHHHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           74 LETMVRVRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        74 ~~~~~~l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      +..+.+++++||..+..+||+|.++...|.+.
T Consensus       773 p~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  773 PQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             cHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence            78899999999999999999999999888754

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.24  E-value=7e-12  Score=83.50  Aligned_cols=91  Identities=16%  Similarity=0.114  Sum_probs=59.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ++||.+.+..++.++|+|++|++++++++|..|+......    ......    ...    ............+..+.++
T Consensus       160 ~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~  227 (260)
T cd05611         160 LAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD----AVFDNI----LSR----RINWPEEVKEFCSPEAVDL  227 (260)
T ss_pred             cChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH----HHHHHH----Hhc----ccCCCCcccccCCHHHHHH
Confidence            4788887777889999999999999999999998643111    111000    000    0000001122345678999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhh
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLE  103 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~  103 (145)
                      +.+||..+|++||++..+.+.|+
T Consensus       228 i~~~l~~~p~~R~~~~~~~~~l~  250 (260)
T cd05611         228 INRLLCMDPAKRLGANGYQEIKS  250 (260)
T ss_pred             HHHHccCCHHHccCCCcHHHHHc
Confidence            99999999999998765555444

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.24  E-value=1.4e-12  Score=89.72  Aligned_cols=89  Identities=19%  Similarity=0.151  Sum_probs=64.3

Q ss_pred             CCCcccccCC---cccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHH
Q 032213            1 MSPEWQNSGL---ITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~~~~---~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (145)
                      +|||++.++.   +..+.|+||+||+++-.++|.+||...+........+..+....           .++.......+.
T Consensus       345 vAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f-----------~p~~w~~Iseea  413 (475)
T KOG0615|consen  345 VAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAF-----------GPLQWDRISEEA  413 (475)
T ss_pred             cChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccc-----------cChhhhhhhHHH
Confidence            5899998554   33578999999999999999999986643332332222111111           113445567788


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHH
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+|+.++|..||+.||++.+++.
T Consensus       414 ~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  414 LDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             HHHHHHhhEeCcccCcCHHHHhc
Confidence            99999999999999999999985

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.24  E-value=1.6e-11  Score=82.54  Aligned_cols=86  Identities=16%  Similarity=0.285  Sum_probs=59.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ++||++.+..++.++|+|+||++++++++|..|+.... ..   ......    ...       .....+...+..+.++
T Consensus       168 ~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~-~~---~~~~~~----~~~-------~~~~~~~~~~~~~~~~  232 (277)
T cd06641         168 MAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELH-PM---KVLFLI----PKN-------NPPTLEGNYSKPLKEF  232 (277)
T ss_pred             cChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccc-hH---HHHHHH----hcC-------CCCCCCcccCHHHHHH
Confidence            47888877778889999999999999999999876431 10   000000    000       0001122335568899


Q ss_pred             HHhcccCCCCCCCCHHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      +.+||+.+|.+||++.+++..
T Consensus       233 i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         233 VEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHccCChhhCcCHHHHHhC
Confidence            999999999999999999873

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.24  E-value=7.9e-12  Score=85.06  Aligned_cols=99  Identities=11%  Similarity=0.083  Sum_probs=58.5

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhC---------cc----
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVG---------ED----   66 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~----   66 (145)
                      +|||++.+ ..++.++|+||+|+++++|++|..||.... ...................+..+..         +.    
T Consensus       171 ~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (301)
T cd07873         171 RPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGST-VEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRAD  249 (301)
T ss_pred             cCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHcCCCChhhchhhhccccccccccCccccc
Confidence            47887754 347788999999999999999999886441 1111111100000000000100000         00    


Q ss_pred             --hhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           67 --EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        67 --~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                        ..........+.+|+.+|+..+|.+|||+.+++.
T Consensus       250 ~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         250 CLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             cHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence              0001122445789999999999999999999986

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.24  E-value=1.2e-11  Score=83.36  Aligned_cols=100  Identities=15%  Similarity=0.180  Sum_probs=58.4

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHH-------HHHHhHh-hhhhCcch----
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYN-------CFIAKEL-NKLVGEDE----   67 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~~~~~----   67 (145)
                      +|||++.+ ..++.++|+||||++++++++|..|+...........+......       ......+ .....+..    
T Consensus       167 ~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (286)
T cd07847         167 RAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETRE  246 (286)
T ss_pred             CCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCccccc
Confidence            47887764 45788999999999999999999988644211111111000000       0000000 00000000    


Q ss_pred             ---hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 ---EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 ---~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                         .........+.+|+.+||..+|++||++.+++.
T Consensus       247 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         247 PLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             CHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence               001122456889999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.24  E-value=1.2e-12  Score=89.85  Aligned_cols=81  Identities=19%  Similarity=0.143  Sum_probs=57.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||||++++++++|..|+.....    .....            .+.......+......+.++
T Consensus       165 ~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~----~~~~~------------~i~~~~~~~p~~~~~~~~~l  228 (318)
T cd05582         165 MAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR----KETMT------------MILKAKLGMPQFLSPEAQSL  228 (318)
T ss_pred             cCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH----HHHHH------------HHHcCCCCCCCCCCHHHHHH
Confidence            579988877888999999999999999999999864311    11110            01111112233345568899


Q ss_pred             HHhcccCCCCCCCCHHH
Q 032213           81 RLLCIQDEPNLRPSMKN   97 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~   97 (145)
                      +.+||+.+|.+||++.+
T Consensus       229 i~~~l~~~P~~R~~a~~  245 (318)
T cd05582         229 LRALFKRNPANRLGAGP  245 (318)
T ss_pred             HHHHhhcCHhHcCCCCC
Confidence            99999999999999544

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.24  E-value=1.4e-11  Score=82.58  Aligned_cols=90  Identities=20%  Similarity=0.319  Sum_probs=57.7

Q ss_pred             CCCcccccCC--cccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHH
Q 032213            1 MSPEWQNSGL--ITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~--~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (145)
                      ++||++....  ++.++|+|++|++++++++|..|+...   .....+...    . .......+..  .........+.
T Consensus       177 ~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~---~~~~~~~~~----~-~~~~~~~~~~--~~~~~~~~~~~  246 (272)
T cd06629         177 MAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDE---EAIAAMFKL----G-NKRSAPPIPP--DVSMNLSPVAL  246 (272)
T ss_pred             cCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCc---chHHHHHHh----h-ccccCCcCCc--cccccCCHHHH
Confidence            4688776543  788999999999999999999987532   111111100    0 0000000111  11112356789


Q ss_pred             HHHHhcccCCCCCCCCHHHHHH
Q 032213           79 RVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +++.+||..+|..||++.+|+.
T Consensus       247 ~li~~~l~~~p~~Rps~~~il~  268 (272)
T cd06629         247 DFLNACFTINPDNRPTARELLQ  268 (272)
T ss_pred             HHHHHHhcCChhhCCCHHHHhh
Confidence            9999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.24  E-value=1e-11  Score=82.42  Aligned_cols=86  Identities=20%  Similarity=0.296  Sum_probs=58.1

Q ss_pred             CCCcccccCC-cccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGL-ITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~-~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||.+.... ++.++|+|+||++++++++|..|+....   ........       ...    ......+......+.+
T Consensus       168 ~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~---~~~~~~~~-------~~~----~~~~~~~~~~~~~~~~  233 (258)
T cd06632         168 MAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE---GVAAVFKI-------GRS----KELPPIPDHLSDEAKD  233 (258)
T ss_pred             eCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc---HHHHHHHH-------Hhc----ccCCCcCCCcCHHHHH
Confidence            4678776555 7889999999999999999999986441   11111000       000    0001122233566789


Q ss_pred             HHHhcccCCCCCCCCHHHHHH
Q 032213           80 VRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ++.+||..+|.+||++.+++.
T Consensus       234 li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         234 FILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             HHHHHhhcCcccCcCHHHHhc
Confidence            999999999999999999864

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.24  E-value=5.9e-12  Score=86.65  Aligned_cols=79  Identities=15%  Similarity=0.180  Sum_probs=56.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..|+.....    .....            .+.......+......+.++
T Consensus       168 ~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~----~~~~~------------~i~~~~~~~p~~~~~~~~~l  231 (323)
T cd05615         168 IAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE----DELFQ------------SIMEHNVSYPKSLSKEAVSI  231 (323)
T ss_pred             cCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH----HHHHH------------HHHhCCCCCCccCCHHHHHH
Confidence            689999888889999999999999999999999864311    11111            11111112233345568899


Q ss_pred             HHhcccCCCCCCCCH
Q 032213           81 RLLCIQDEPNLRPSM   95 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~   95 (145)
                      +.+||..+|.+|++.
T Consensus       232 i~~~l~~~p~~R~~~  246 (323)
T cd05615         232 CKGLMTKHPSKRLGC  246 (323)
T ss_pred             HHHHcccCHhhCCCC
Confidence            999999999999974

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.23  E-value=9.9e-12  Score=82.66  Aligned_cols=87  Identities=14%  Similarity=0.132  Sum_probs=58.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHH--HHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLR--TLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~   78 (145)
                      ++||+......+.++|+|+||++++++++|..|+..... .   .....            +.......+..  ....+.
T Consensus       168 ~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-~---~~~~~------------~~~~~~~~~~~~~~~~~~~  231 (265)
T cd05579         168 IAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP-E---EIFQN------------ILNGKIEWPEDVEVSDEAI  231 (265)
T ss_pred             cCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-H---HHHHH------------HhcCCcCCCccccCCHHHH
Confidence            468877777788899999999999999999999864311 0   11100            00000111111  256789


Q ss_pred             HHHHhcccCCCCCCCCHHHHHHHhh
Q 032213           79 RVRLLCIQDEPNLRPSMKNVILMLE  103 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~~L~  103 (145)
                      +++.+||+.+|.+||++..+.+.|+
T Consensus       232 ~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         232 DLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             HHHHHHhcCCHhhcCCCccHHHHhc
Confidence            9999999999999999966655554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.23  E-value=3.8e-11  Score=80.46  Aligned_cols=92  Identities=24%  Similarity=0.293  Sum_probs=54.7

Q ss_pred             CCCccccc-------CCcccccchhhHHHHHHHHHhC-CCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHH
Q 032213            1 MSPEWQNS-------GLITVKSDVYSFGVVLLEIVCC-RSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLR   72 (145)
Q Consensus         1 ~aPe~~~~-------~~~~~~~dv~s~g~v~~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (145)
                      +|||++..       ..++.++|+||||++++|++++ ..|+... ....   .....   . ......+.++...  ..
T Consensus       168 ~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~-~~~~---~~~~~---~-~~~~~~~~~~~~~--~~  237 (268)
T cd05086         168 LAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHL-SDRE---VLNHV---I-KDQQVKLFKPQLE--LP  237 (268)
T ss_pred             cCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCC-CHHH---HHHHH---H-hhcccccCCCccC--CC
Confidence            47887642       2346789999999999999875 4565432 1111   11100   0 0111111222111  11


Q ss_pred             HHHHHHHHHHhcccCCCCCCCCHHHHHHHhh
Q 032213           73 TLETMVRVRLLCIQDEPNLRPSMKNVILMLE  103 (145)
Q Consensus        73 ~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~L~  103 (145)
                      ....+.+++..|| .+|++||++.+|++.|.
T Consensus       238 ~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         238 YSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            3455778899999 67999999999988763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.23  E-value=3.4e-11  Score=80.44  Aligned_cols=89  Identities=18%  Similarity=0.327  Sum_probs=60.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+|++|++++++++|..|+.... .........   .      .. ........+......+.++
T Consensus       175 ~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~-~~~~~~~~~---~------~~-~~~~~~~~~~~~~~~~~~~  243 (268)
T cd06630         175 MAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEK-HSNHLALIF---K------IA-SATTAPSIPEHLSPGLRDV  243 (268)
T ss_pred             eCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCC-CcchHHHHH---H------Hh-ccCCCCCCchhhCHHHHHH
Confidence            47888877778899999999999999999999875331 111111100   0      00 0001112333455678899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.+++.
T Consensus       244 i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         244 TLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             HHHHcCCCcccCcCHHHHhc
Confidence            99999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.23  E-value=1.8e-11  Score=83.90  Aligned_cols=86  Identities=17%  Similarity=0.238  Sum_probs=56.8

Q ss_pred             CCCcccc---cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHH
Q 032213            1 MSPEWQN---SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~---~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (145)
                      +|||++.   ...++.++|+||||++++++++|..|+..........    ..   . ...     .+.. ........+
T Consensus       184 ~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~----~~---~-~~~-----~~~~-~~~~~~~~l  249 (313)
T cd06633         184 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY----HI---A-QND-----SPTL-QSNEWTDSF  249 (313)
T ss_pred             cChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH----HH---H-hcC-----CCCC-CccccCHHH
Confidence            5788873   3557889999999999999999999876431111000    00   0 000     0000 011123457


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHH
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+++.+||+.+|.+||++.+++.
T Consensus       250 ~~li~~~l~~~P~~Rp~~~~~l~  272 (313)
T cd06633         250 RGFVDYCLQKIPQERPASAELLR  272 (313)
T ss_pred             HHHHHHHccCChhhCcCHHHHhc
Confidence            89999999999999999999975

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.23  E-value=3.5e-12  Score=88.48  Aligned_cols=88  Identities=15%  Similarity=0.207  Sum_probs=59.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+|||||+++||++|..|+...........+..|          ....  ..+........+.++
T Consensus       197 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~----------~~~~--~~p~~~~~~~~~~~l  264 (350)
T cd05573         197 IAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINW----------KESL--RFPPDPPVSPEAIDL  264 (350)
T ss_pred             cCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhcc----------CCcc--cCCCCCCCCHHHHHH
Confidence            5899998888999999999999999999999998754211111001000          0000  001111135668899


Q ss_pred             HHhcccCCCCCCCC-HHHHHHH
Q 032213           81 RLLCIQDEPNLRPS-MKNVILM  101 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt-~~~v~~~  101 (145)
                      +.+|+. +|.+|++ +.+++..
T Consensus       265 i~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         265 ICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             HHHHcc-ChhhcCCCHHHHhcC
Confidence            999997 9999999 9999863

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.23  E-value=2.1e-11  Score=84.43  Aligned_cols=100  Identities=12%  Similarity=0.076  Sum_probs=58.5

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHH-------HHHHHhHhhhhhCcchhhc--
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVY-------NCFIAKELNKLVGEDEEVD--   70 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~--   70 (145)
                      +|||++.+ ..++.++|+||+|++++++++|..||...........+.....       ..................+  
T Consensus       182 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (343)
T cd07878         182 RAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQ  261 (343)
T ss_pred             cCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccch
Confidence            58998865 5688899999999999999999998864311111111110000       0000000000000000000  


Q ss_pred             ------HHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           71 ------LRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        71 ------~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                            ......+.+|+.+|+..||.+||++.+++.
T Consensus       262 ~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~  297 (343)
T cd07878         262 DLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA  297 (343)
T ss_pred             hHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                  011234679999999999999999999985

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.23  E-value=2.3e-11  Score=83.78  Aligned_cols=107  Identities=12%  Similarity=0.125  Sum_probs=64.1

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHH----H---HHHhHhhhh---hCcch--
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYN----C---FIAKELNKL---VGEDE--   67 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~---~~~~~--   67 (145)
                      +|||++.+. .++.++|+|++|++++++++|..|+...........+......    .   .........   .....  
T Consensus       173 ~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (330)
T cd07834         173 RAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKK  252 (330)
T ss_pred             CCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcc
Confidence            478988766 7889999999999999999999988654211111111100000    0   000000000   00000  


Q ss_pred             ---hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH--HhhccCC
Q 032213           68 ---EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL--MLEGTME  107 (145)
Q Consensus        68 ---~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~--~L~~~~~  107 (145)
                         .........+.+++.+||+.+|.+||++.+++.  .++....
T Consensus       253 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~  297 (330)
T cd07834         253 PLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD  297 (330)
T ss_pred             hhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence               011123556889999999999999999999987  3555444

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.23  E-value=1.7e-11  Score=85.71  Aligned_cols=84  Identities=19%  Similarity=0.277  Sum_probs=63.0

Q ss_pred             CCCcccccCC-cc-cccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHH-HHHH
Q 032213            1 MSPEWQNSGL-IT-VKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRT-LETM   77 (145)
Q Consensus         1 ~aPe~~~~~~-~~-~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   77 (145)
                      +|||++.+.. |. .++||||+||+++.|++|..||...    ....+            +..+.......|... ...+
T Consensus       188 ~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~----~~~~l------------~~ki~~~~~~~p~~~~S~~~  251 (370)
T KOG0583|consen  188 AAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS----NVPNL------------YRKIRKGEFKIPSYLLSPEA  251 (370)
T ss_pred             CCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc----cHHHH------------HHHHhcCCccCCCCcCCHHH
Confidence            5899998766 75 7899999999999999999999853    11111            111222223344444 7788


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHH
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ..|+.+|+..+|..|+++.+++.
T Consensus       252 ~~Li~~mL~~~P~~R~t~~~i~~  274 (370)
T KOG0583|consen  252 RSLIEKMLVPDPSTRITLLEILE  274 (370)
T ss_pred             HHHHHHHcCCCcccCCCHHHHhh
Confidence            99999999999999999999984

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.23  E-value=5e-12  Score=84.62  Aligned_cols=92  Identities=23%  Similarity=0.349  Sum_probs=55.6

Q ss_pred             CCCcccc-------cCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHH
Q 032213            1 MSPEWQN-------SGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLR   72 (145)
Q Consensus         1 ~aPe~~~-------~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (145)
                      +|||++.       ...++.++|+||||++++|+++ |..|+...... .  .+...    . ......+..+  ..+..
T Consensus       169 ~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-~--~~~~~----~-~~~~~~~~~~--~~~~~  238 (269)
T cd05042         169 LAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE-Q--VLKQV----V-REQDIKLPKP--QLDLK  238 (269)
T ss_pred             cCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH-H--HHHHH----h-hccCccCCCC--ccccc
Confidence            4678764       2346789999999999999998 66676533111 1  11000    0 0000001111  11223


Q ss_pred             HHHHHHHHHHhcccCCCCCCCCHHHHHHHhh
Q 032213           73 TLETMVRVRLLCIQDEPNLRPSMKNVILMLE  103 (145)
Q Consensus        73 ~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~L~  103 (145)
                      ....+..++..|| .+|++||++.+|+..|.
T Consensus       239 ~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         239 YSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             CCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            3455677889999 59999999999998874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.23  E-value=1.8e-11  Score=83.14  Aligned_cols=87  Identities=11%  Similarity=0.153  Sum_probs=59.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ++||++.+..++.++|+|++|++++++++|..|+... .........            .................+.++
T Consensus       183 ~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~-~~~~~~~~~------------~~~~~~~~~~~~~~~~~l~~l  249 (292)
T cd06657         183 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE-PPLKAMKMI------------RDNLPPKLKNLHKVSPSLKGF  249 (292)
T ss_pred             cCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHH------------HhhCCcccCCcccCCHHHHHH
Confidence            4788887777889999999999999999999987643 111110000            001111111111224457889


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.+++.
T Consensus       250 i~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         250 LDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             HHHHHhCCcccCcCHHHHhc
Confidence            99999999999999999976

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.23  E-value=1.2e-11  Score=86.54  Aligned_cols=86  Identities=20%  Similarity=0.260  Sum_probs=65.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      |.||.+.+..|..++|+|++||+++|+++-+++|...    +...++...        ......   +.+.....++..+
T Consensus       173 mcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~----~m~~Li~ki--------~~~~~~---Plp~~ys~el~~l  237 (426)
T KOG0589|consen  173 MCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS----NMSELILKI--------NRGLYS---PLPSMYSSELRSL  237 (426)
T ss_pred             cCHHHhCCCCCCccCcchhhcchHHHHHhcccccCcc----chHHHHHHH--------hhccCC---CCCccccHHHHHH
Confidence            6899999999999999999999999999999998754    111111111        111111   3344557789999


Q ss_pred             HHhcccCCCCCCCCHHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      +..|+..+|..||++.+++..
T Consensus       238 v~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  238 VKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             HHHHhhcCCccCCCHHHHhhC
Confidence            999999999999999999864

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.22  E-value=2.5e-12  Score=98.76  Aligned_cols=87  Identities=17%  Similarity=0.309  Sum_probs=64.3

Q ss_pred             CCCcccccCC---cccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHH
Q 032213            1 MSPEWQNSGL---ITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~~~~---~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (145)
                      ||||++.+.+   ...+.||||+|||++||+||++|+...+.        +|......      .....+..|.....+-
T Consensus      1405 MAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn--------e~aIMy~V------~~gh~Pq~P~~ls~~g 1470 (1509)
T KOG4645|consen 1405 MAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN--------EWAIMYHV------AAGHKPQIPERLSSEG 1470 (1509)
T ss_pred             cCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc--------hhHHHhHH------hccCCCCCchhhhHhH
Confidence            8999997543   55789999999999999999999875521        11111110      1233345566678888


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHHH
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      .+++.+|++.||+.|.++.|+++.
T Consensus      1471 ~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1471 RDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             HHHHHHHHhcCchhhhHHHHHHHh
Confidence            999999999999999999888664

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.22  E-value=8.1e-11  Score=79.25  Aligned_cols=100  Identities=14%  Similarity=0.204  Sum_probs=57.8

Q ss_pred             CCCcccc-cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHH---------HHHHHHHHhHhhhhhC----cc
Q 032213            1 MSPEWQN-SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLST---------WVYNCFIAKELNKLVG----ED   66 (145)
Q Consensus         1 ~aPe~~~-~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~----~~   66 (145)
                      +|||++. ...++.++|+||||++++++++|..++..............         |.........+...+.    ..
T Consensus       165 ~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (283)
T cd07830         165 RAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTS  244 (283)
T ss_pred             cCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccccccccc
Confidence            5788775 34578899999999999999999988754311111111110         0000000000000000    00


Q ss_pred             h-hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           67 E-EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        67 ~-~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      . .........+.+++.+||+.+|.+||++.+++.
T Consensus       245 ~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         245 LHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             HHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence            0 001111456889999999999999999999865

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.22  E-value=1.2e-11  Score=87.80  Aligned_cols=84  Identities=19%  Similarity=0.273  Sum_probs=65.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ++||++..+..+..+|+|+|||+++.|+.|.+||...    ....+            +++++...-..|...+....+|
T Consensus       254 VSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~----Neyli------------FqkI~~l~y~fp~~fp~~a~dL  317 (604)
T KOG0592|consen  254 VSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAA----NEYLI------------FQKIQALDYEFPEGFPEDARDL  317 (604)
T ss_pred             cCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccc----cHHHH------------HHHHHHhcccCCCCCCHHHHHH
Confidence            4799999999999999999999999999999999754    11111            1223333334455556778999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+.|..+|.+|.+..++.+
T Consensus       318 v~KLLv~dp~~Rlt~~qIk~  337 (604)
T KOG0592|consen  318 IKKLLVRDPSDRLTSQQIKA  337 (604)
T ss_pred             HHHHHccCccccccHHHHhh
Confidence            99999999999999998875

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.22  E-value=2.2e-11  Score=80.63  Aligned_cols=85  Identities=20%  Similarity=0.337  Sum_probs=60.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhh--CcchhhcHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLV--GEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~   78 (145)
                      ++||.+.+...+.++|+|++|++++++++|..|+....   .....            ...+.  ......+......+.
T Consensus       170 ~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---~~~~~------------~~~~~~~~~~~~~~~~~~~~l~  234 (260)
T cd06606         170 MAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG---NPMAA------------LYKIGSSGEPPEIPEHLSEEAK  234 (260)
T ss_pred             cCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---chHHH------------HHhccccCCCcCCCcccCHHHH
Confidence            46888877778899999999999999999999987542   00000            00011  011122333466789


Q ss_pred             HHHHhcccCCCCCCCCHHHHHH
Q 032213           79 RVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +++.+||..+|.+||++.+++.
T Consensus       235 ~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         235 DFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             HHHHHhCcCChhhCCCHHHHhh
Confidence            9999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.22  E-value=1.2e-11  Score=81.59  Aligned_cols=88  Identities=18%  Similarity=0.272  Sum_probs=62.1

Q ss_pred             CCCcccc---cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHH
Q 032213            1 MSPEWQN---SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~---~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (145)
                      ||||.+.   ..+|..++|||||||.++|+.||..||...  ..++..+. .+        + .-.++.++........+
T Consensus       258 MaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c--~tdFe~lt-kv--------l-n~ePP~L~~~~gFSp~F  325 (391)
T KOG0983|consen  258 MAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGC--KTDFEVLT-KV--------L-NEEPPLLPGHMGFSPDF  325 (391)
T ss_pred             cCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCC--CccHHHHH-HH--------H-hcCCCCCCcccCcCHHH
Confidence            7899886   336889999999999999999999998753  22222111 00        0 01112222233356779


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHH
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ..++..||.+|+.+||...++++
T Consensus       326 ~~fv~~CL~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  326 QSFVKDCLTKDHRKRPKYNKLLE  348 (391)
T ss_pred             HHHHHHHhhcCcccCcchHHHhc
Confidence            99999999999999999998875

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.22  E-value=9.2e-12  Score=95.23  Aligned_cols=85  Identities=18%  Similarity=0.135  Sum_probs=58.0

Q ss_pred             CCCccccc--CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHH
Q 032213            1 MSPEWQNS--GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~--~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (145)
                      +|||++.+  ..++.++|||||||++|+|++|..||......   ..+...         +...  +..+ .......+.
T Consensus       208 mAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~---~qli~~---------lk~~--p~lp-i~~~S~eL~  272 (1021)
T PTZ00266        208 WSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNF---SQLISE---------LKRG--PDLP-IKGKSKELN  272 (1021)
T ss_pred             cCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcH---HHHHHH---------HhcC--CCCC-cCCCCHHHH
Confidence            58998853  45788999999999999999999998643111   111100         0000  0000 011245688


Q ss_pred             HHHHhcccCCCCCCCCHHHHHH
Q 032213           79 RVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +|+..||..+|.+||++.+++.
T Consensus       273 dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        273 ILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             HHHHHHhcCChhHCcCHHHHhc
Confidence            9999999999999999999984

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.22  E-value=1.6e-11  Score=85.08  Aligned_cols=106  Identities=12%  Similarity=0.093  Sum_probs=62.2

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHH--------HHHHhHhhhhh---C----
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYN--------CFIAKELNKLV---G----   64 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~---~----   64 (145)
                      +|||++.+ ..++.++|+||||++++|+++|+.||...... ...........        ...........   .    
T Consensus       181 ~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (342)
T cd07879         181 RAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPR  259 (342)
T ss_pred             cChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCccc
Confidence            57998765 45788999999999999999999998743111 11110000000        00000000000   0    


Q ss_pred             cch-hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH--HhhccCC
Q 032213           65 EDE-EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL--MLEGTME  107 (145)
Q Consensus        65 ~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~--~L~~~~~  107 (145)
                      ... ...+.....+.+++.+||+.+|.+||++.+++.  .++....
T Consensus       260 ~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~  305 (342)
T cd07879         260 KDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD  305 (342)
T ss_pred             chHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence            000 000112345789999999999999999999985  3555543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.22  E-value=1.8e-11  Score=81.01  Aligned_cols=85  Identities=25%  Similarity=0.371  Sum_probs=59.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ++||...+..++.++|+|++|++++++++|..|+....    ...+...        ...   ......+......+.++
T Consensus       170 ~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~----~~~~~~~--------~~~---~~~~~~~~~~~~~~~~~  234 (258)
T cd08215         170 LSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN----LLELALK--------ILK---GQYPPIPSQYSSELRNL  234 (258)
T ss_pred             cChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc----HHHHHHH--------Hhc---CCCCCCCCCCCHHHHHH
Confidence            47888777778899999999999999999998876431    1111110        000   00111222345678999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.+++.
T Consensus       235 i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         235 VSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             HHHHcCCChhhCcCHHHHhc
Confidence            99999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.22  E-value=4.7e-11  Score=83.10  Aligned_cols=100  Identities=11%  Similarity=0.052  Sum_probs=60.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHH-----------HHHHHHHH----h------Hh
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLST-----------WVYNCFIA----K------EL   59 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~-----------~~~~~~~~----~------~~   59 (145)
                      +|||++.+..++.++|+||+|++++++++|..|+...........+..           ........    .      .+
T Consensus       184 ~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (353)
T cd07850         184 RAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSF  263 (353)
T ss_pred             cCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcch
Confidence            479988888899999999999999999999998864311111000000           00000000    0      00


Q ss_pred             hhhhCcch------hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           60 NKLVGEDE------EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        60 ~~~~~~~~------~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ..+.....      ..+......+.+++.+||+.||.+||++.+++.
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~  310 (353)
T cd07850         264 EELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ  310 (353)
T ss_pred             hhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            00000000      001123456789999999999999999999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.22  E-value=3e-11  Score=83.57  Aligned_cols=104  Identities=13%  Similarity=0.150  Sum_probs=61.3

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHH--------HHHHhHhhhhh---C----
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYN--------CFIAKELNKLV---G----   64 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~---~----   64 (145)
                      +|||++.. ..++.++|+|+||++++++++|..|+... ..............        ..........+   .    
T Consensus       175 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (337)
T cd07858         175 RAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGK-DYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPR  253 (337)
T ss_pred             cChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCC-ChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccc
Confidence            47887753 45888999999999999999999988643 11111111000000        00000000000   0    


Q ss_pred             cc-hhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH--hhcc
Q 032213           65 ED-EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILM--LEGT  105 (145)
Q Consensus        65 ~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~--L~~~  105 (145)
                      .. ..........+.+++.+||..+|.+||++.+++..  ++.+
T Consensus       254 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~  297 (337)
T cd07858         254 QSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL  297 (337)
T ss_pred             cCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence            00 01112335568899999999999999999999864  5544

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.21  E-value=2.1e-11  Score=82.00  Aligned_cols=88  Identities=19%  Similarity=0.216  Sum_probs=59.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ++||++.+..++.++|+|++|++++++++|+.|+...........+..            .........+......+.++
T Consensus       161 ~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l  228 (277)
T cd05577         161 MAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKR------------RTLEMAVEYPDKFSPEAKDL  228 (277)
T ss_pred             CCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHh------------ccccccccCCccCCHHHHHH
Confidence            478988877788999999999999999999999864311111111110            01111112223335668999


Q ss_pred             HHhcccCCCCCCC-----CHHHHHH
Q 032213           81 RLLCIQDEPNLRP-----SMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rp-----t~~~v~~  100 (145)
                      +.+||+.+|.+||     ++.+++.
T Consensus       229 i~~~l~~~p~~R~~~~~~~~~~ll~  253 (277)
T cd05577         229 CEALLQKDPEKRLGCRGGSADEVRE  253 (277)
T ss_pred             HHHHccCChhHccCCCcccHHHHHh
Confidence            9999999999999     6666654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.21  E-value=2.2e-12  Score=88.78  Aligned_cols=80  Identities=14%  Similarity=0.106  Sum_probs=56.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++|+||+|+++++|++|..||.....    ..+..            .+.......+......+.++
T Consensus       163 ~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~----~~~~~------------~~~~~~~~~~~~~~~~~~~l  226 (325)
T cd05604         163 LAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV----AEMYD------------NILHKPLVLRPGASLTAWSI  226 (325)
T ss_pred             CCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH----HHHHH------------HHHcCCccCCCCCCHHHHHH
Confidence            689999888899999999999999999999999864311    11110            01111111122234567889


Q ss_pred             HHhcccCCCCCCCCHH
Q 032213           81 RLLCIQDEPNLRPSMK   96 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~   96 (145)
                      +.+|+..+|.+||++.
T Consensus       227 l~~ll~~~p~~R~~~~  242 (325)
T cd05604         227 LEELLEKDRQRRLGAK  242 (325)
T ss_pred             HHHHhccCHHhcCCCC
Confidence            9999999999999875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.21  E-value=2.5e-11  Score=84.18  Aligned_cols=99  Identities=14%  Similarity=0.121  Sum_probs=58.4

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHH-------HHHHHHhHhhhhh-----Ccch
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWV-------YNCFIAKELNKLV-----GEDE   67 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-----~~~~   67 (145)
                      +|||++.+ ..++.++|+||||++++++++|..|+................       .... ...+....     ....
T Consensus       185 ~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  263 (342)
T cd07854         185 RSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNEL-LNVIPSFVRNDGGEPRR  263 (342)
T ss_pred             cCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhh-hhhhhhhhhhcccccCC
Confidence            47887653 457789999999999999999999986442211111111000       0000 00000000     0000


Q ss_pred             ---hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 ---EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 ---~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                         .........+.+++.+||..+|.+||++.+++.
T Consensus       264 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         264 PLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             CHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence               011123456789999999999999999999975

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.21  E-value=1.5e-11  Score=89.28  Aligned_cols=79  Identities=16%  Similarity=0.217  Sum_probs=64.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..|+.+.|.|+|||++|||+.|..||.....    ..            ....++.....+|.....+...+
T Consensus       535 ~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE----ee------------~FdsI~~d~~~yP~~ls~ea~~i  598 (694)
T KOG0694|consen  535 LAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE----EE------------VFDSIVNDEVRYPRFLSKEAIAI  598 (694)
T ss_pred             cChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCH----HH------------HHHHHhcCCCCCCCcccHHHHHH
Confidence            799999999999999999999999999999999975411    11            12224444556777888899999


Q ss_pred             HHhcccCCCCCCCCH
Q 032213           81 RLLCIQDEPNLRPSM   95 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~   95 (145)
                      +.+.+.++|++|--+
T Consensus       599 l~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  599 MRRLLRKNPEKRLGS  613 (694)
T ss_pred             HHHHhccCcccccCC
Confidence            999999999999755

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.21  E-value=2.8e-11  Score=86.14  Aligned_cols=90  Identities=18%  Similarity=0.271  Sum_probs=73.2

Q ss_pred             CCcccccCCcc-cccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            2 SPEWQNSGLIT-VKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         2 aPe~~~~~~~~-~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      |||.+.+..|. .+.||||+||++|-+++|+.||..-.                ...-+-.++|++-..|.....++.+|
T Consensus       186 APEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAN----------------DSETLTmImDCKYtvPshvS~eCrdL  249 (864)
T KOG4717|consen  186 APEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAN----------------DSETLTMIMDCKYTVPSHVSKECRDL  249 (864)
T ss_pred             CchhhhcCccCCcchhhhHHHHHHHHHHhCCCcccccc----------------chhhhhhhhcccccCchhhhHHHHHH
Confidence            79999888775 78999999999999999999997431                12233446788888888999999999


Q ss_pred             HHhcccCCCCCCCCHHHHHH--HhhccCC
Q 032213           81 RLLCIQDEPNLRPSMKNVIL--MLEGTME  107 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~--~L~~~~~  107 (145)
                      +..+|..+|.+|.+..++..  +|+..-.
T Consensus       250 I~sMLvRdPkkRAslEeI~s~~Wlq~~D~  278 (864)
T KOG4717|consen  250 IQSMLVRDPKKRASLEEIVSTSWLQAGDR  278 (864)
T ss_pred             HHHHHhcCchhhccHHHHhccccccCCCC
Confidence            99999999999999999875  5555443

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.21  E-value=3.2e-11  Score=81.22  Aligned_cols=86  Identities=20%  Similarity=0.293  Sum_probs=57.1

Q ss_pred             CCCccccc----CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhc-HHHHH
Q 032213            1 MSPEWQNS----GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVD-LRTLE   75 (145)
Q Consensus         1 ~aPe~~~~----~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   75 (145)
                      +|||++.+    ..++.++|+|+||++++++++|..|+........  .+...         .. ....  ..+ ...+.
T Consensus       170 ~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~--~~~~~---------~~-~~~~--~~~~~~~~~  235 (283)
T cd06617         170 MAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQ--QLKQV---------VE-EPSP--QLPAEKFSP  235 (283)
T ss_pred             cChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHH--HHHHH---------Hh-cCCC--CCCccccCH
Confidence            47887754    3457889999999999999999999864311111  11000         00 0000  111 12345


Q ss_pred             HHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           76 TMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        76 ~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+.+++.+||..+|.+||++.+++.
T Consensus       236 ~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         236 EFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhc
Confidence            6899999999999999999999975

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.21  E-value=4.5e-11  Score=85.90  Aligned_cols=101  Identities=13%  Similarity=0.087  Sum_probs=58.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCc-------hhhHhHHHHHHHH---HH-------HhHhhhh-
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVST-------ADVVLLSTWVYNC---FI-------AKELNKL-   62 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~-------~~~~~~~~~~~~~---~~-------~~~~~~~-   62 (145)
                      ||||++.+..++.++|||||||++||+++|..++......       .....++......   ..       ...+... 
T Consensus       329 ~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~  408 (461)
T PHA03211        329 NAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRA  408 (461)
T ss_pred             cCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhh
Confidence            5899998888999999999999999999887655432110       0111111111000   00       0000000 


Q ss_pred             ---hCcc-----hhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 032213           63 ---VGED-----EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        63 ---~~~~-----~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                         ..+.     ..........+.+|+.+||..||.+||++.|++..
T Consensus       409 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h  455 (461)
T PHA03211        409 ARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL  455 (461)
T ss_pred             hcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence               0000     00000123357889999999999999999999863

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.21  E-value=1.9e-11  Score=83.28  Aligned_cols=99  Identities=13%  Similarity=0.056  Sum_probs=57.5

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhH------hhhhh----C----c
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKE------LNKLV----G----E   65 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~----~----~   65 (145)
                      +|||++.+ ..++.++|+|+||++++++++|..|+...........+.... .......      +....    .    .
T Consensus       193 ~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (311)
T cd07866         193 RPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLC-GTPTEETWPGWRSLPGCEGVHSFTNYPR  271 (311)
T ss_pred             CChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh-CCCChhhchhhhhcccccccccCCCCCc
Confidence            47887754 347889999999999999999998886442211111111100 0000000      00000    0    0


Q ss_pred             ch-hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           66 DE-EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        66 ~~-~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .. .........+.+++.+||..+|.+||++.+++.
T Consensus       272 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         272 TLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             cHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence            00 000112246789999999999999999998864

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.20  E-value=2e-11  Score=82.05  Aligned_cols=85  Identities=16%  Similarity=0.248  Sum_probs=57.3

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcH-HHHHHHH
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDL-RTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   78 (145)
                      +|||++.+ ..++.++|+|+||++++++++|..|+......    ....         .+.....+  ..+. ..+..+.
T Consensus       168 ~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~----~~~~---------~~~~~~~~--~~~~~~~~~~~~  232 (277)
T cd06917         168 MAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF----RAMM---------LIPKSKPP--RLEDNGYSKLLR  232 (277)
T ss_pred             eCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh----hhhh---------ccccCCCC--CCCcccCCHHHH
Confidence            47887764 34688999999999999999999998643111    0000         00000000  1111 1355788


Q ss_pred             HHHHhcccCCCCCCCCHHHHHH
Q 032213           79 RVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +++.+||..+|++||++.+++.
T Consensus       233 ~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         233 EFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             HHHHHHcCCCcccCcCHHHHhh
Confidence            9999999999999999999976

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.20  E-value=5.1e-12  Score=86.82  Aligned_cols=80  Identities=14%  Similarity=0.142  Sum_probs=57.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++|+++|..||....    ...+..            .+.......+......+.++
T Consensus       163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~----~~~~~~------------~i~~~~~~~~~~~~~~~~~l  226 (321)
T cd05603         163 LAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD----VSQMYD------------NILHKPLQLPGGKTVAACDL  226 (321)
T ss_pred             CCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC----HHHHHH------------HHhcCCCCCCCCCCHHHHHH
Confidence            58999888889999999999999999999999986431    111110            11111122233345568899


Q ss_pred             HHhcccCCCCCCCCHH
Q 032213           81 RLLCIQDEPNLRPSMK   96 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~   96 (145)
                      +.+||+.+|.+|++..
T Consensus       227 i~~~l~~~p~~R~~~~  242 (321)
T cd05603         227 LVGLLHKDQRRRLGAK  242 (321)
T ss_pred             HHHHccCCHhhcCCCC
Confidence            9999999999998753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.20  E-value=5.4e-11  Score=79.97  Aligned_cols=99  Identities=15%  Similarity=0.127  Sum_probs=58.7

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhh---------hhhCc----c
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN---------KLVGE----D   66 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~----~   66 (145)
                      +|||++... .++.++|+|+||++++++++|..|+...........+..... ......+.         .....    .
T Consensus       165 ~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (282)
T cd07829         165 RAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILG-TPTEESWPGVTKLPDYKPTFPKFPPKD  243 (282)
T ss_pred             CChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhC-CCcHHHHHhhcccccccccccccCccc
Confidence            478887655 788899999999999999999888764311111111100000 00000000         00000    0


Q ss_pred             h-hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           67 E-EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        67 ~-~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      . .........+.+++.+||..+|.+||++.+++.
T Consensus       244 ~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         244 LEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             hHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence            0 001112456899999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.20  E-value=4.2e-11  Score=80.65  Aligned_cols=99  Identities=12%  Similarity=0.086  Sum_probs=58.6

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhh--------hhCcch----
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNK--------LVGEDE----   67 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~----   67 (145)
                      +|||.+.+ ..++.++|+|+||++++++++|..|+...........+.... .......+..        ......    
T Consensus       168 ~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (287)
T cd07840         168 RPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELC-GSPTDENWPGVSKLPWFENLKPKKPYKR  246 (287)
T ss_pred             CCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh-CCCchhhccccccchhhhhccccccchh
Confidence            57887654 357889999999999999999999886542211111111100 0000000000        000000    


Q ss_pred             ---hhcHH-HHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 ---EVDLR-TLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 ---~~~~~-~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                         ..... ....+.+++.+||..+|.+||++.+++.
T Consensus       247 ~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         247 RLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             HHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence               00011 1556889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.20  E-value=2.1e-11  Score=83.07  Aligned_cols=99  Identities=10%  Similarity=0.059  Sum_probs=57.1

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhh-----h-----Ccch--
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKL-----V-----GEDE--   67 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-----~~~~--   67 (145)
                      +|||++.+. .++.++|+||||++++++++|..++.... ...................+...     .     ....  
T Consensus       190 ~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (310)
T cd07865         190 RPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNT-EQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKR  268 (310)
T ss_pred             cCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccch
Confidence            578987654 36788999999999999999998876431 11111111111100000000000     0     0000  


Q ss_pred             hh-----cHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 EV-----DLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 ~~-----~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ..     +......+.+++.+||..+|.+||++.+++.
T Consensus       269 ~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         269 KVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN  306 (310)
T ss_pred             hhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence            00     0001234678999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.20  E-value=2e-11  Score=81.20  Aligned_cols=86  Identities=16%  Similarity=0.084  Sum_probs=59.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ++||++....++.++|+|++|++++++++|..|+...... ....+..    .        ........+...+..+.++
T Consensus       166 ~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~----~--------~~~~~~~~~~~~~~~~~~~  232 (258)
T cd05578         166 MAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT-IRDQIRA----K--------QETADVLYPATWSTEAIDA  232 (258)
T ss_pred             cCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc-HHHHHHH----H--------hccccccCcccCcHHHHHH
Confidence            4788888777899999999999999999999998754211 1111110    0        0001112233345778999


Q ss_pred             HHhcccCCCCCCCCH--HHHH
Q 032213           81 RLLCIQDEPNLRPSM--KNVI   99 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~--~~v~   99 (145)
                      +.+||..+|.+||++  .+++
T Consensus       233 i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         233 INKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             HHHHccCChhHcCCccHHHHh
Confidence            999999999999999  5553

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.20  E-value=1.3e-11  Score=85.17  Aligned_cols=86  Identities=15%  Similarity=0.266  Sum_probs=57.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..||......... ........        .+.......+......+.++
T Consensus       163 ~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~-~~~~~~~~--------~~~~~~~~~p~~~~~~~~~l  233 (327)
T cd05617         163 IAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDM-NTEDYLFQ--------VILEKPIRIPRFLSVKASHV  233 (327)
T ss_pred             CCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCccc-ccHHHHHH--------HHHhCCCCCCCCCCHHHHHH
Confidence            5899998888999999999999999999999998643111110 00001000        01111112233345567899


Q ss_pred             HHhcccCCCCCCCCH
Q 032213           81 RLLCIQDEPNLRPSM   95 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~   95 (145)
                      +.+||..+|.+|+++
T Consensus       234 i~~~L~~dP~~R~~~  248 (327)
T cd05617         234 LKGFLNKDPKERLGC  248 (327)
T ss_pred             HHHHhccCHHHcCCC
Confidence            999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.19  E-value=3.3e-11  Score=83.26  Aligned_cols=99  Identities=17%  Similarity=0.139  Sum_probs=59.7

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHH--------HHhHhhh---hhCcchh
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCF--------IAKELNK---LVGEDEE   68 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~---~~~~~~~   68 (145)
                      ++||++.+ ..++.++|+|+||++++++++|+.||...... .............        ....+..   .......
T Consensus       178 ~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (334)
T cd07855         178 RAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV-HQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQP  256 (334)
T ss_pred             cChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH-HHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCC
Confidence            46887754 45788999999999999999999998654111 1111110000000        0000000   0111111


Q ss_pred             h-----cHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           69 V-----DLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        69 ~-----~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .     .......+.+++.+||+.+|.+||++.+++.
T Consensus       257 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  293 (334)
T cd07855         257 VPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ  293 (334)
T ss_pred             CCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            1     1223567899999999999999999999886

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.19  E-value=1.1e-11  Score=87.70  Aligned_cols=86  Identities=12%  Similarity=0.164  Sum_probs=64.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..|....|.||+|||++|++.|.+||+...+......+..|.......            .......+..+|
T Consensus       355 iAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP------------~~~~~s~eA~DL  422 (550)
T KOG0605|consen  355 IAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFP------------EEVDLSDEAKDL  422 (550)
T ss_pred             cchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCC------------CcCcccHHHHHH
Confidence            79999999999999999999999999999999999775555555555554332211            111223668899


Q ss_pred             HHhcccCCCCCCCC---HHHHH
Q 032213           81 RLLCIQDEPNLRPS---MKNVI   99 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt---~~~v~   99 (145)
                      +.+|+. ||.+|--   +.||.
T Consensus       423 I~rll~-d~~~RLG~~G~~EIK  443 (550)
T KOG0605|consen  423 ITRLLC-DPENRLGSKGAEEIK  443 (550)
T ss_pred             HHHHhc-CHHHhcCcccHHHHh
Confidence            999999 9998875   44443

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.19  E-value=2.3e-11  Score=83.09  Aligned_cols=99  Identities=12%  Similarity=0.114  Sum_probs=58.6

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhh----------hCc-chh
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKL----------VGE-DEE   68 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~-~~~   68 (145)
                      +|||++.+ ..++.++|+|++|++++++++|..|+...........+.... .......+..+          ... ...
T Consensus       175 ~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (309)
T cd07845         175 RAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLL-GTPNESIWPGFSDLPLVGKFTLPKQPYN  253 (309)
T ss_pred             cChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc-CCCChhhchhhhcccccccccccCCCCC
Confidence            47888764 457889999999999999999999886431111111111100 00000000000          000 000


Q ss_pred             h----cHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           69 V----DLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        69 ~----~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .    .......+.+++.+||+.||.+||++.+++.
T Consensus       254 ~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~  289 (309)
T cd07845         254 NLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE  289 (309)
T ss_pred             chHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            0    0112456789999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.18  E-value=3.4e-11  Score=81.59  Aligned_cols=99  Identities=12%  Similarity=0.086  Sum_probs=58.4

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhh--------hC----cch
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKL--------VG----EDE   67 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----~~~   67 (145)
                      +|||++.+ ..++.++|+|+||++++++++|..|+...........+...... .....+...        ..    ...
T Consensus       178 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (295)
T cd07837         178 RAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGT-PTEQVWPGVSKLRDWHEFPQWKPQDL  256 (295)
T ss_pred             CChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCC-CChhhCcchhhccchhhcCcccchhH
Confidence            47887764 45688999999999999999999888643111111111110000 000000000        00    000


Q ss_pred             -hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 -EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 -~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                       .........+.+++.+||..+|.+||++.+++.
T Consensus       257 ~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         257 SRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             HHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence             001123456889999999999999999999864

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.18  E-value=8.8e-11  Score=78.50  Aligned_cols=96  Identities=15%  Similarity=0.248  Sum_probs=62.2

Q ss_pred             CCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhC----------cch---
Q 032213            2 SPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVG----------EDE---   67 (145)
Q Consensus         2 aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~---   67 (145)
                      |||.+.+ ..|....|||++||++.||++|.+-+... +..++...+........++.. .++.          +.+   
T Consensus       169 aPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~-SDiDQLy~I~ktLG~L~prhq-~iF~~N~~F~Gv~lP~~~~~  246 (396)
T KOG0593|consen  169 APELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGR-SDIDQLYLIRKTLGNLIPRHQ-SIFSSNPFFHGVRLPEPEHP  246 (396)
T ss_pred             ChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCc-chHHHHHHHHHHHcccCHHHH-HHhccCCceeeeecCCCCCc
Confidence            7888875 67999999999999999999998766543 444444333322211111111 1110          000   


Q ss_pred             ----hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHH
Q 032213           68 ----EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVI   99 (145)
Q Consensus        68 ----~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~   99 (145)
                          ..-+.....+.+|+..|+++||++|++.++++
T Consensus       247 epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll  282 (396)
T KOG0593|consen  247 EPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLL  282 (396)
T ss_pred             cchhhhcccchHHHHHHHHHHhcCCccccccHHHHh
Confidence                11112344689999999999999999999987

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.18  E-value=4.2e-11  Score=82.63  Aligned_cols=84  Identities=15%  Similarity=0.223  Sum_probs=64.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcch--hhcHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDE--EVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   78 (145)
                      +|||++++..+..++|.|.|||++|||++|..||........                +..++...+  +..+..+..+.
T Consensus       302 lAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~T----------------l~NIv~~~l~Fp~~~~vs~~ak  365 (459)
T KOG0610|consen  302 LAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKET----------------LRNIVGQPLKFPEEPEVSSAAK  365 (459)
T ss_pred             ccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhh----------------HHHHhcCCCcCCCCCcchhHHH
Confidence            699999999999999999999999999999999986522222                222333333  22225567899


Q ss_pred             HHHHhcccCCCCCCCC----HHHHHH
Q 032213           79 RVRLLCIQDEPNLRPS----MKNVIL  100 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt----~~~v~~  100 (145)
                      +|+.+.|.+||.+|.-    +.||-+
T Consensus       366 DLIr~LLvKdP~kRlg~~rGA~eIK~  391 (459)
T KOG0610|consen  366 DLIRKLLVKDPSKRLGSKRGAAEIKR  391 (459)
T ss_pred             HHHHHHhccChhhhhccccchHHhhc
Confidence            9999999999999987    777754

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.17  E-value=3.8e-11  Score=81.26  Aligned_cols=100  Identities=15%  Similarity=0.119  Sum_probs=57.4

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhh--------------Cc
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLV--------------GE   65 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~   65 (145)
                      +|||++.+ ..++.++|+||+|++++++++|..|+........................+....              ..
T Consensus       170 ~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (291)
T cd07844         170 RPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPR  249 (291)
T ss_pred             CCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCCh
Confidence            47888764 4478899999999999999999988864321111111110000000000000000              00


Q ss_pred             ch-hhcHHH--HHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           66 DE-EVDLRT--LETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        66 ~~-~~~~~~--~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .. ......  ...+.+++.+||..+|.+||++.+++.
T Consensus       250 ~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         250 PLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             hHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence            00 000011  256789999999999999999998864

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.17  E-value=3.8e-11  Score=79.43  Aligned_cols=85  Identities=20%  Similarity=0.338  Sum_probs=58.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ++||++.+..++.++|+|++|++++++++|..|+....   ........            ........+......+.++
T Consensus       166 ~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~---~~~~~~~~------------~~~~~~~~~~~~~~~~~~~  230 (254)
T cd06627         166 MAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN---PMAALFRI------------VQDDHPPLPEGISPELKDF  230 (254)
T ss_pred             cCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc---HHHHHHHH------------hccCCCCCCCCCCHHHHHH
Confidence            47888876668889999999999999999998876431   11000000            0001111222335678899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|++||++.+++.
T Consensus       231 i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         231 LMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             HHHHHhCChhhCcCHHHHhc
Confidence            99999999999999999864

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.17  E-value=2.7e-11  Score=81.29  Aligned_cols=84  Identities=14%  Similarity=0.175  Sum_probs=58.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ++||+.....++.++|+|++|++++++++|..|+....   .. ....            .+.......+......+.++
T Consensus       189 ~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~---~~-~~~~------------~~~~~~~~~~~~~~~~~~~l  252 (280)
T cd05581         189 VSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN---EY-LTFQ------------KILKLEYSFPPNFPPDAKDL  252 (280)
T ss_pred             cCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc---HH-HHHH------------HHHhcCCCCCCccCHHHHHH
Confidence            46787777778889999999999999999999987431   11 0000            01111112223335668999


Q ss_pred             HHhcccCCCCCCCCH----HHHHH
Q 032213           81 RLLCIQDEPNLRPSM----KNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~----~~v~~  100 (145)
                      +.+||..+|.+||++    .+++.
T Consensus       253 i~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         253 IEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             HHHHhcCCHhhCCCcccCHHHHhc
Confidence            999999999999999    66653

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.17  E-value=6.2e-11  Score=80.24  Aligned_cols=99  Identities=12%  Similarity=0.128  Sum_probs=57.6

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHH-HHHHHh---------Hh-hhhhC----
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVY-NCFIAK---------EL-NKLVG----   64 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~---------~~-~~~~~----   64 (145)
                      +|||++.+. .++.++|+||||++++++++|..|+............. +.. ......         .. .....    
T Consensus       170 ~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (291)
T cd07870         170 RPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKI-WTVLGVPTEDTWPGVSKLPNYKPEWFLPCKP  248 (291)
T ss_pred             cCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHH-HHHcCCCChhhhhhhhhcccccchhccccCC
Confidence            578987643 47788999999999999999999987542211111000 000 000000         00 00000    


Q ss_pred             cchhh---cHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           65 EDEEV---DLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        65 ~~~~~---~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .....   .......+.+++.+|+..+|.+|||+.+++.
T Consensus       249 ~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         249 QQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             cchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence            00000   0011356789999999999999999999864

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.17  E-value=1.2e-11  Score=89.20  Aligned_cols=85  Identities=18%  Similarity=0.216  Sum_probs=61.8

Q ss_pred             CCCcccc---cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHH
Q 032213            1 MSPEWQN---SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~---~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (145)
                      ||||++.   .+.|+.++||||+||.++|+...++|+.........+++...-.+...              ..+-...+
T Consensus       189 MAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLq--------------s~eWS~~F  254 (948)
T KOG0577|consen  189 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQ--------------SNEWSDYF  254 (948)
T ss_pred             cchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCC--------------CchhHHHH
Confidence            7999985   678999999999999999999999998754223333333321111111              12235668


Q ss_pred             HHHHHhcccCCCCCCCCHHHHH
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVI   99 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~   99 (145)
                      ..|+..|+++-|.+|||..+++
T Consensus       255 ~~Fvd~CLqKipqeRptse~ll  276 (948)
T KOG0577|consen  255 RNFVDSCLQKIPQERPTSEELL  276 (948)
T ss_pred             HHHHHHHHhhCcccCCcHHHHh
Confidence            9999999999999999988776

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.17  E-value=1e-10  Score=80.85  Aligned_cols=100  Identities=17%  Similarity=0.169  Sum_probs=58.7

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHH-----------HHHHHHhHhhhhhCcch-
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWV-----------YNCFIAKELNKLVGEDE-   67 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~-   67 (145)
                      ++||++.+ ..++.++|+||||++++++++|..|+...........+....           ........+..+..... 
T Consensus       179 ~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (337)
T cd07852         179 RAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRK  258 (337)
T ss_pred             cCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhccccccc
Confidence            57887653 457788999999999999999998875431111111111000           00000000000000000 


Q ss_pred             ---hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 ---EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 ---~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                         .........+.+++.+||+.+|.+||++.+++.
T Consensus       259 ~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~  294 (337)
T cd07852         259 PLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALE  294 (337)
T ss_pred             chhhhccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence               001113456889999999999999999999986

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.17  E-value=4.9e-11  Score=86.63  Aligned_cols=92  Identities=18%  Similarity=0.265  Sum_probs=66.0

Q ss_pred             CCcccccCCcc-cccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            2 SPEWQNSGLIT-VKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         2 aPe~~~~~~~~-~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +||++.+..|. .++||||.||+++.+++|..||.+. ..+.....+               -.-.-.-|-..+.+..+|
T Consensus       179 ~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd-Nir~LLlKV---------------~~G~f~MPs~Is~eaQdL  242 (786)
T KOG0588|consen  179 APEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD-NIRVLLLKV---------------QRGVFEMPSNISSEAQDL  242 (786)
T ss_pred             CchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc-cHHHHHHHH---------------HcCcccCCCcCCHHHHHH
Confidence            79999988875 6799999999999999999999843 111111111               111112234456678999


Q ss_pred             HHhcccCCCCCCCCHHHHHH--HhhccCCCC
Q 032213           81 RLLCIQDEPNLRPSMKNVIL--MLEGTMEIP  109 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~--~L~~~~~~~  109 (145)
                      +.+++..||..|.|+.+|+.  .|.+....+
T Consensus       243 Lr~ml~VDp~~RiT~~eI~kHP~l~g~~~~~  273 (786)
T KOG0588|consen  243 LRRMLDVDPSTRITTEEILKHPFLSGYTSLP  273 (786)
T ss_pred             HHHHhccCccccccHHHHhhCchhhcCCCCC
Confidence            99999999999999999987  455554443

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.16  E-value=4.7e-11  Score=80.88  Aligned_cols=84  Identities=12%  Similarity=0.089  Sum_probs=58.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ++||.+.+...+.++|+|++|++++++++|..|+.... .   .....            .+.......+......+.++
T Consensus       165 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-~---~~~~~------------~~~~~~~~~~~~~~~~l~~l  228 (290)
T cd05580         165 LAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN-P---IQIYE------------KILEGKVRFPSFFSPDAKDL  228 (290)
T ss_pred             cChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-H---HHHHH------------HHhcCCccCCccCCHHHHHH
Confidence            57898877778889999999999999999999986431 0   00000            01111112222335668899


Q ss_pred             HHhcccCCCCCCC-----CHHHHHH
Q 032213           81 RLLCIQDEPNLRP-----SMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rp-----t~~~v~~  100 (145)
                      +.+||..+|.+|+     ++.+++.
T Consensus       229 i~~~l~~~p~~R~~~~~~~~~~l~~  253 (290)
T cd05580         229 IRNLLQVDLTKRLGNLKNGVNDIKN  253 (290)
T ss_pred             HHHHccCCHHHccCcccCCHHHHHc
Confidence            9999999999998     6777763

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.15  E-value=5.4e-11  Score=77.53  Aligned_cols=87  Identities=14%  Similarity=0.080  Sum_probs=63.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||+++...|+..+|+|+.|++++-++.|+.||...    .+..+.+..        ...-.+-..+..........+|
T Consensus       179 maPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~----~~~rlye~I--------~~g~yd~~~~~w~~is~~Ak~L  246 (355)
T KOG0033|consen  179 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE----DQHRLYEQI--------KAGAYDYPSPEWDTVTPEAKSL  246 (355)
T ss_pred             cCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCc----cHHHHHHHH--------hccccCCCCcccCcCCHHHHHH
Confidence            7999999999999999999999999999999999753    111221111        0001111112333446668899


Q ss_pred             HHhcccCCCCCCCCHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVI   99 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~   99 (145)
                      +.+++..||.+|.|+.|.+
T Consensus       247 vrrML~~dP~kRIta~EAL  265 (355)
T KOG0033|consen  247 IRRMLTVNPKKRITADEAL  265 (355)
T ss_pred             HHHHhccChhhhccHHHHh
Confidence            9999999999999999886

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.15  E-value=8e-11  Score=79.31  Aligned_cols=99  Identities=12%  Similarity=0.107  Sum_probs=58.5

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhh------hC---cch---
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKL------VG---EDE---   67 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~~---   67 (145)
                      ++||++.+ ..++.++|+|++|++++++++|..|+................. ......+..+      ..   ...   
T Consensus       167 ~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (284)
T cd07836         167 RAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMG-TPTESTWPGISQLPEYKPTFPRYPPQD  245 (284)
T ss_pred             cChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhC-CCChhhHHHHhcCchhcccccCCChHH
Confidence            47887754 3467899999999999999999998865422111111111100 0000000000      00   000   


Q ss_pred             --hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 --EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 --~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                        .........+.+++.+||+.+|.+||++.+++.
T Consensus       246 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         246 LQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             HHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence              011123456789999999999999999999874

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.15  E-value=7.2e-11  Score=79.57  Aligned_cols=100  Identities=13%  Similarity=0.153  Sum_probs=57.4

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHH----HHHH----hHhhhhh-Ccch---
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYN----CFIA----KELNKLV-GEDE---   67 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~~~~~-~~~~---   67 (145)
                      +|||++.+. .++.++|+|++|++++++++|..++..................    .+..    ..+..+. ....   
T Consensus       167 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (286)
T cd07832         167 RAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIP  246 (286)
T ss_pred             cCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcch
Confidence            578887643 4688999999999999999997666533111111000000000    0000    0000000 0000   


Q ss_pred             --hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 --EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 --~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                        .........+.+++.+||..+|.+||++.+++.
T Consensus       247 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~  281 (286)
T cd07832         247 LEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR  281 (286)
T ss_pred             HHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence              001123467899999999999999999999875

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.15  E-value=7.3e-11  Score=81.85  Aligned_cols=100  Identities=12%  Similarity=0.136  Sum_probs=57.9

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHH-------HHHHHHhHhhhhhC-----cch
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWV-------YNCFIAKELNKLVG-----EDE   67 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~-----~~~   67 (145)
                      +|||.+.+ ..++.++|+||+|++++++++|+.|+...........+....       ............+.     ...
T Consensus       182 ~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (343)
T cd07851         182 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKK  261 (343)
T ss_pred             cCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCC
Confidence            46887654 357789999999999999999999886431111111110000       00000000000000     000


Q ss_pred             ---hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 ---EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 ---~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                         .........+.+++.+||..+|.+|||+.+|+.
T Consensus       262 ~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         262 DFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             CHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence               001112456889999999999999999999975

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.15  E-value=6.5e-11  Score=80.22  Aligned_cols=99  Identities=11%  Similarity=0.068  Sum_probs=58.4

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhh---h-----------hhCc
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN---K-----------LVGE   65 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----------~~~~   65 (145)
                      +|||++.+. .++.++|+||+|++++++++|..|+...........+...... .....+.   .           ....
T Consensus       173 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (293)
T cd07843         173 RAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGT-PTEKIWPGFSELPGAKKKTFTKYPYN  251 (293)
T ss_pred             cCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC-CchHHHHHhhccchhcccccccccch
Confidence            578887644 3678999999999999999999988654221111111110000 0000000   0           0000


Q ss_pred             ch--hhcHH-HHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           66 DE--EVDLR-TLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        66 ~~--~~~~~-~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ..  ..+.. ....+.+++.+||+.+|++||++.+++.
T Consensus       252 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         252 QLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             hhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence            00  01111 2456789999999999999999999874

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.15  E-value=4.9e-11  Score=85.97  Aligned_cols=98  Identities=17%  Similarity=0.159  Sum_probs=62.3

Q ss_pred             CCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHH---------------HHHH-h--------
Q 032213            2 SPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYN---------------CFIA-K--------   57 (145)
Q Consensus         2 aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~---------------~~~~-~--------   57 (145)
                      |||++.+..|+.+.||||||||+.||++|.+-|. .....++...+.....               .... .        
T Consensus       356 APEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfp-G~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~  434 (586)
T KOG0667|consen  356 APEVILGLPYDTAIDMWSLGCILAELFTGEPLFP-GDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVE  434 (586)
T ss_pred             cchhhccCCCCCccceeehhhhHHhHhcCccccC-CCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeee
Confidence            8999999999999999999999999999955443 3233333322211100               0000 0        


Q ss_pred             -------------H-hhhhhCc-ch---------hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           58 -------------E-LNKLVGE-DE---------EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        58 -------------~-~~~~~~~-~~---------~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                                   . +....+. +.         .........+.+++.+|+..||..|+|..+++.
T Consensus       435 ~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~  501 (586)
T KOG0667|consen  435 TSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALN  501 (586)
T ss_pred             ecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhc
Confidence                         0 0000000 00         111134567899999999999999999999986

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.15  E-value=5.8e-11  Score=80.70  Aligned_cols=99  Identities=14%  Similarity=0.073  Sum_probs=57.9

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhh--------Cc------
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLV--------GE------   65 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~------   65 (145)
                      ++||++.+ ..++.++|+|++|++++++++|+.|+..... ..................+..+.        +.      
T Consensus       184 ~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (302)
T cd07864         184 RPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE-LAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRR  262 (302)
T ss_pred             cChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCChhhccccccccccccccccccccc
Confidence            46887753 3467899999999999999999988864311 11111111100000000000000        00      


Q ss_pred             ch-hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           66 DE-EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        66 ~~-~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .. ......+..+.+++.+||..+|.+||++.+++.
T Consensus       263 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         263 RLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             chhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            00 001123567899999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.15  E-value=8.7e-11  Score=78.49  Aligned_cols=85  Identities=14%  Similarity=0.102  Sum_probs=58.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+|+||++++++++|..|+......   ......         .  ........+......+.++
T Consensus       176 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~---------~--~~~~~~~~p~~~~~~~~~~  241 (264)
T cd06653         176 MSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM---AAIFKI---------A--TQPTKPMLPDGVSDACRDF  241 (264)
T ss_pred             cCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH---HHHHHH---------H--cCCCCCCCCcccCHHHHHH
Confidence            4789888777889999999999999999999998643111   000000         0  0011112344456779999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||. ++..||+..+++.
T Consensus       242 i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         242 LKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             HHHHhc-CcccCccHHHHhc
Confidence            999999 4799999997754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.15  E-value=3.2e-11  Score=84.77  Aligned_cols=88  Identities=18%  Similarity=0.219  Sum_probs=56.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+||+++||++|..||...........+..+.          ..  ...+........+.+|
T Consensus       215 ~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~----------~~--~~~~~~~~~s~~~~dl  282 (381)
T cd05626         215 IAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWE----------NT--LHIPPQVKLSPEAVDL  282 (381)
T ss_pred             cCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccc----------cc--cCCCCCCCCCHHHHHH
Confidence            58999888888999999999999999999999987541111111111000          00  0001111223456677


Q ss_pred             HHh--cccCCCCCCCCHHHHHH
Q 032213           81 RLL--CIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~--cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+  |+..++..|+++.+++.
T Consensus       283 i~~ll~~~~~~~~R~~~~~~l~  304 (381)
T cd05626         283 ITKLCCSAEERLGRNGADDIKA  304 (381)
T ss_pred             HHHHccCcccccCCCCHHHHhc
Confidence            765  66667778999999986

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.14  E-value=7.2e-11  Score=79.66  Aligned_cols=87  Identities=15%  Similarity=0.150  Sum_probs=58.7

Q ss_pred             CCCcccc-cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQN-SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~-~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||... +..++.++|+||+|++++++++|..|+........ ..+....            .......+......+.+
T Consensus       162 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~------------~~~~~~~~~~~~~~~~~  228 (279)
T cd05633         162 MAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMT------------LTVNVELPDSFSPELKS  228 (279)
T ss_pred             cCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH-HHHHHHh------------hcCCcCCccccCHHHHH
Confidence            5788875 44578899999999999999999999864421111 1110000            00011123334567889


Q ss_pred             HHHhcccCCCCCCC-----CHHHHHH
Q 032213           80 VRLLCIQDEPNLRP-----SMKNVIL  100 (145)
Q Consensus        80 l~~~cl~~~p~~Rp-----t~~~v~~  100 (145)
                      ++.+||..+|.+|+     ++.++++
T Consensus       229 li~~~l~~~p~~R~~~~~~~~~~~~~  254 (279)
T cd05633         229 LLEGLLQRDVSKRLGCLGRGAQEVKE  254 (279)
T ss_pred             HHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence            99999999999999     5888865

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.14  E-value=7.9e-11  Score=79.96  Aligned_cols=99  Identities=11%  Similarity=0.077  Sum_probs=57.6

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhh------hhhC--cch----
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN------KLVG--EDE----   67 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~--~~~----   67 (145)
                      +|||.+.+ ..++.++|+|+||++++++++|..++................ .......+.      ....  ...    
T Consensus       169 ~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (298)
T cd07841         169 RAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEAL-GTPTEENWPGVTSLPDYVEFKPFPPTPL  247 (298)
T ss_pred             eCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHc-CCCchhhhhhcccccccccccccCCcch
Confidence            46787653 456889999999999999999976665331111111111000 000000000      0000  000    


Q ss_pred             -hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 -EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 -~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                       .........+.+++.+||..+|.+||++.+++.
T Consensus       248 ~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~  281 (298)
T cd07841         248 KQIFPAASDDALDLLQRLLTLNPNKRITARQALE  281 (298)
T ss_pred             hhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence             111223566889999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.14  E-value=2.6e-11  Score=82.31  Aligned_cols=77  Identities=18%  Similarity=0.193  Sum_probs=57.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhh-cHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEV-DLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   79 (145)
                      ||||++.+..|+..+|.||+|++++||++|.+||......                .....+...+... +.-.....++
T Consensus       192 mAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~----------------~~~~~I~~~k~~~~p~~ls~~ard  255 (357)
T KOG0598|consen  192 MAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVK----------------KMYDKILKGKLPLPPGYLSEEARD  255 (357)
T ss_pred             cChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHH----------------HHHHHHhcCcCCCCCccCCHHHHH
Confidence            7999999999999999999999999999999999754111                1112223333222 2224667899


Q ss_pred             HHHhcccCCCCCCC
Q 032213           80 VRLLCIQDEPNLRP   93 (145)
Q Consensus        80 l~~~cl~~~p~~Rp   93 (145)
                      ++.+.+..+|.+|.
T Consensus       256 ll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  256 LLKKLLKRDPRQRL  269 (357)
T ss_pred             HHHHHhccCHHHhc
Confidence            99999999999995

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.13  E-value=6.3e-11  Score=78.34  Aligned_cols=81  Identities=15%  Similarity=0.111  Sum_probs=56.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ++||...+...+.++|+|+||++++++++|..|+... ..   ......            +.......+......+.++
T Consensus       160 ~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~-~~---~~~~~~------------~~~~~~~~~~~~~~~l~~~  223 (250)
T cd05123         160 LAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAE-DR---KEIYEK------------ILKDPLRFPEFLSPEARDL  223 (250)
T ss_pred             cChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCC-CH---HHHHHH------------HhcCCCCCCCCCCHHHHHH
Confidence            4688877777788999999999999999999998643 11   111110            1111112233335668899


Q ss_pred             HHhcccCCCCCCCCHHH
Q 032213           81 RLLCIQDEPNLRPSMKN   97 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~   97 (145)
                      +.+||..+|..||++.+
T Consensus       224 i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         224 ISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             HHHHhcCCHhhCCCccc
Confidence            99999999999999943

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.13  E-value=1.2e-10  Score=76.25  Aligned_cols=88  Identities=17%  Similarity=0.161  Sum_probs=58.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ++||......++.++|+|++|++++++++|..|+......   .......         .................+.++
T Consensus       153 ~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~---~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~  220 (244)
T smart00220      153 MAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL---LELFKKI---------GKPKPPFPPPEWKISPEAKDL  220 (244)
T ss_pred             CCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH---HHHHHHH---------hccCCCCccccccCCHHHHHH
Confidence            4688777677888999999999999999999887642111   1111100         000000000000034578899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.+++.
T Consensus       221 i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      221 IRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HHHHccCCchhccCHHHHhh
Confidence            99999999999999999975

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.12  E-value=1e-10  Score=80.74  Aligned_cols=101  Identities=13%  Similarity=0.141  Sum_probs=59.4

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHH--------HHHHHh--HhhhhhCcchhh
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVY--------NCFIAK--ELNKLVGEDEEV   69 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~--------~~~~~~--~~~~~~~~~~~~   69 (145)
                      ++||++.+ ..++.++|+|+||++++++++|..|+...........+.....        ......  .+..........
T Consensus       172 ~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (328)
T cd07856         172 RAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPV  251 (328)
T ss_pred             cCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCC
Confidence            57888765 5678899999999999999999988864311111111111000        000000  000000000011


Q ss_pred             c-----HHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 032213           70 D-----LRTLETMVRVRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        70 ~-----~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      +     ......+.+++.+||+.+|.+||++.+++..
T Consensus       252 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         252 PFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             cHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            1     1124678999999999999999999998753

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.12  E-value=1.5e-11  Score=83.92  Aligned_cols=98  Identities=12%  Similarity=0.150  Sum_probs=65.3

Q ss_pred             CCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHh----------------------
Q 032213            2 SPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKEL----------------------   59 (145)
Q Consensus         2 aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------   59 (145)
                      |||++.+..++...||||+||+++|+.+|..-|+.+. ..+...+.+.........-+                      
T Consensus       277 APEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHe-n~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~  355 (415)
T KOG0671|consen  277 APEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHE-NLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSK  355 (415)
T ss_pred             CchheeccCcCCccCceeeeeEEEEeeccceecccCC-cHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCcccccc
Confidence            8999999999999999999999999999998888763 32322232222110000000                      


Q ss_pred             ---hhhhCc-ch-----hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           60 ---NKLVGE-DE-----EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        60 ---~~~~~~-~~-----~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                         +.+.+. ++     .........+.+|+.+++..||.+|+|+.|++.
T Consensus       356 ~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~  405 (415)
T KOG0671|consen  356 GKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS  405 (415)
T ss_pred             ccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence               001110 00     112233556899999999999999999999975

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.12  E-value=6.8e-11  Score=81.67  Aligned_cols=99  Identities=12%  Similarity=0.088  Sum_probs=58.7

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhh------------hhCcch
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNK------------LVGEDE   67 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~   67 (145)
                      +|||++.+. .++.++|+|++|++++++++|..|+...........+...... .....+..            ......
T Consensus       200 ~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (335)
T PTZ00024        200 RAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGT-PNEDNWPQAKKLPLYTEFTPRKPKDL  278 (335)
T ss_pred             CCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC-CchhhCcchhhcccccccCcCCcccH
Confidence            478887653 4688999999999999999999888644211111111110000 00000000            000000


Q ss_pred             -hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 -EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 -~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                       .........+.+++.+||..+|.+||++.+++.
T Consensus       279 ~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        279 KTIFPNASDDAIDLLQSLLKLNPLERISAKEALK  312 (335)
T ss_pred             HHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence             011122456789999999999999999999986

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.12  E-value=6.9e-11  Score=80.12  Aligned_cols=106  Identities=13%  Similarity=0.106  Sum_probs=65.9

Q ss_pred             CCcccc-cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhH--------hhhhh---Ccchhh
Q 032213            2 SPEWQN-SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKE--------LNKLV---GEDEEV   69 (145)
Q Consensus         2 aPe~~~-~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~---~~~~~~   69 (145)
                      |||.+. ...|+.+.||||.||++.||++|++-|... ....+..++...........        ..+.+   ......
T Consensus       195 APElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~-d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~  273 (359)
T KOG0660|consen  195 APELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGK-DYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQ  273 (359)
T ss_pred             CHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCC-chHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCC
Confidence            677664 667999999999999999999999877654 22222222221111111111        11111   111111


Q ss_pred             c-----HHHHHHHHHHHHhcccCCCCCCCCHHHHHH--HhhccCCC
Q 032213           70 D-----LRTLETMVRVRLLCIQDEPNLRPSMKNVIL--MLEGTMEI  108 (145)
Q Consensus        70 ~-----~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~--~L~~~~~~  108 (145)
                      +     +.......+|+.++|..||.+|+|+.+++.  -|+.....
T Consensus       274 ~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp  319 (359)
T KOG0660|consen  274 PFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDP  319 (359)
T ss_pred             CHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCC
Confidence            1     134556789999999999999999999986  35555443

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.11  E-value=1.7e-10  Score=81.02  Aligned_cols=99  Identities=16%  Similarity=0.202  Sum_probs=62.5

Q ss_pred             CCcccc-cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHH-----HHH-hHhhhhh----Ccch---
Q 032213            2 SPEWQN-SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNC-----FIA-KELNKLV----GEDE---   67 (145)
Q Consensus         2 aPe~~~-~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~----~~~~---   67 (145)
                      |||++. ++.|+.+.|+|++||+++|+.+-++-|... +..++...+-.+...     +.. ..+...+    ....   
T Consensus       177 APEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~-sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~  255 (538)
T KOG0661|consen  177 APEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGA-SEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSP  255 (538)
T ss_pred             chHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCC-cHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCC
Confidence            789875 778999999999999999999877665433 333332222111100     000 0111111    1111   


Q ss_pred             --hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 032213           68 --EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        68 --~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                        ..-+....++..|+.+|+..||++|||+.++++.
T Consensus       256 l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  256 LKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             hHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence              1122367788999999999999999999999864

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.10  E-value=1.5e-10  Score=74.98  Aligned_cols=85  Identities=15%  Similarity=0.151  Sum_probs=65.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ++||.+.+..++...|+|++|++++|++.|.+||....    .            ...+.++..-+...|........++
T Consensus       189 l~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~----~------------~etYkrI~k~~~~~p~~is~~a~dl  252 (281)
T KOG0580|consen  189 LPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS----H------------SETYKRIRKVDLKFPSTISGGAADL  252 (281)
T ss_pred             CCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh----h------------HHHHHHHHHccccCCcccChhHHHH
Confidence            47999999999999999999999999999999997541    1            1112223222333445567778999


Q ss_pred             HHhcccCCCCCCCCHHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      +.+|+..+|.+|.+..+++..
T Consensus       253 I~~ll~~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  253 ISRLLVKNPIERLALTEVMDH  273 (281)
T ss_pred             HHHHhccCccccccHHHHhhh
Confidence            999999999999999999763

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.10  E-value=2.1e-10  Score=79.71  Aligned_cols=101  Identities=13%  Similarity=0.098  Sum_probs=58.2

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHH-------HHHH---HhHhhhhhCcch--
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVY-------NCFI---AKELNKLVGEDE--   67 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~---~~~~~~~~~~~~--   67 (145)
                      +|||++.+ ..++.++|+|++|++++++++|+.|+...........+.....       ....   ...+........  
T Consensus       184 ~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (345)
T cd07877         184 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKM  263 (345)
T ss_pred             cCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCc
Confidence            47887754 4578899999999999999999998854311111111100000       0000   000000000000  


Q ss_pred             hh---cHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 032213           68 EV---DLRTLETMVRVRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        68 ~~---~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      ..   .......+.+++.+|++.+|.+||++.+++..
T Consensus       264 ~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         264 NFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             chhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence            00   00124467899999999999999999999863

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.10  E-value=9.4e-11  Score=79.47  Aligned_cols=99  Identities=13%  Similarity=0.110  Sum_probs=58.4

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhH---------hhhhh----Ccc
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKE---------LNKLV----GED   66 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~----~~~   66 (145)
                      ++||++.+ ..++.++|+|++|++++++++|..|+.................. .....         +....    ...
T Consensus       170 ~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (294)
T PLN00009        170 RAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGT-PNEETWPGVTSLPDYKSAFPKWPPKD  248 (294)
T ss_pred             cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC-CChhhccccccchhhhhhcccCCCCC
Confidence            57888765 34688999999999999999999988643111111111100000 00000         00000    000


Q ss_pred             h-hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           67 E-EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        67 ~-~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      . .........+.+++.+|+..+|.+||++.+++.
T Consensus       249 ~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        249 LATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             HHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0 011123455789999999999999999999975

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.10  E-value=1.8e-10  Score=78.75  Aligned_cols=37  Identities=19%  Similarity=0.313  Sum_probs=30.9

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCC
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVN   37 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~   37 (145)
                      +|||++.+ ..++.++|+||||++++++++|..|+...
T Consensus       182 ~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~  219 (316)
T cd07842         182 RAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGR  219 (316)
T ss_pred             cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence            57887765 35788999999999999999999988644

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.10  E-value=1.6e-10  Score=77.89  Aligned_cols=87  Identities=17%  Similarity=0.178  Sum_probs=59.1

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.++ .++.++|+|++|++++++++|..|+........ .... ..           ........+......+.+
T Consensus       162 ~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~-~~~~-~~-----------~~~~~~~~~~~~s~~~~~  228 (278)
T cd05606         162 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEID-RM-----------TLTMAVELPDSFSPELRS  228 (278)
T ss_pred             cCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch-HHHH-HH-----------hhccCCCCCCcCCHHHHH
Confidence            589988643 578899999999999999999999864411111 1000 00           000011122223567899


Q ss_pred             HHHhcccCCCCCCC-----CHHHHHH
Q 032213           80 VRLLCIQDEPNLRP-----SMKNVIL  100 (145)
Q Consensus        80 l~~~cl~~~p~~Rp-----t~~~v~~  100 (145)
                      ++.+|+..+|.+|+     ++.++++
T Consensus       229 li~~~l~~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         229 LLEGLLQRDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             HHHHHhhcCHHhccCCCCCCHHHHHh
Confidence            99999999999999     8988875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.09  E-value=8.4e-11  Score=84.65  Aligned_cols=85  Identities=22%  Similarity=0.251  Sum_probs=60.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||+.. ..|.+..||||||++++||+|+.-||..-......+..+..+.   .+..+..          -...++.+|
T Consensus       211 MAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGi---KP~sl~k----------V~dPevr~f  276 (632)
T KOG0584|consen  211 MAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGI---KPAALSK----------VKDPEVREF  276 (632)
T ss_pred             cChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCC---CHHHhhc----------cCCHHHHHH
Confidence            8999875 7899999999999999999999999875433333222221110   0001111          113468999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+|+.. ...|+++.+++.
T Consensus       277 IekCl~~-~~~R~sa~eLL~  295 (632)
T KOG0584|consen  277 IEKCLAT-KSERLSAKELLK  295 (632)
T ss_pred             HHHHhcC-chhccCHHHHhh
Confidence            9999999 899999999986

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.09  E-value=7.1e-11  Score=78.18  Aligned_cols=92  Identities=21%  Similarity=0.322  Sum_probs=66.8

Q ss_pred             CCCcccccCC---cccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHH
Q 032213            1 MSPEWQNSGL---ITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~~~~---~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (145)
                      |+||.+..+.   .-.+.|+|||.+++||+.+...||....+.+....+.              +-.-+...|+.....+
T Consensus       353 mspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkia--------------leglrv~ippgis~hm  418 (448)
T KOG0195|consen  353 MSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA--------------LEGLRVHIPPGISRHM  418 (448)
T ss_pred             CCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh--------------hccccccCCCCccHHH
Confidence            5677775432   3467899999999999999999998663322222211              1111223455667788


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      ..|+.-|+..||.+||.+..++..|+++.
T Consensus       419 ~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  419 NKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             HHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence            99999999999999999999999998753

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.09  E-value=3.5e-10  Score=78.08  Aligned_cols=100  Identities=14%  Similarity=0.117  Sum_probs=57.7

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHH-------HHHHHHhHhh---hhhCc--ch
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWV-------YNCFIAKELN---KLVGE--DE   67 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~---~~~~~--~~   67 (145)
                      +|||++.+ ..++.++|+||+|++++++++|..|+................       ..........   .....  ..
T Consensus       176 ~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (332)
T cd07857         176 RAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKK  255 (332)
T ss_pred             cCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCc
Confidence            47887754 457889999999999999999998876431111110000000       0000000000   00000  00


Q ss_pred             ---hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 ---EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 ---~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                         .........+.+++.+||+.+|.+||++.+++.
T Consensus       256 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~  291 (332)
T cd07857         256 PFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE  291 (332)
T ss_pred             chHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence               000112456889999999999999999999874

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.09  E-value=1.6e-10  Score=88.06  Aligned_cols=93  Identities=15%  Similarity=0.220  Sum_probs=61.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcch-hhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDE-EVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   79 (145)
                      ||||++.+..++.++|+||+|++++|+++|..|+..... . .....         ..   +..+.. ......+..+.+
T Consensus       198 mAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~-~-ki~~~---------~~---i~~P~~~~p~~~iP~~L~~  263 (932)
T PRK13184        198 MAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKG-R-KISYR---------DV---ILSPIEVAPYREIPPFLSQ  263 (932)
T ss_pred             CCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcch-h-hhhhh---------hh---ccChhhccccccCCHHHHH
Confidence            689999888899999999999999999999999864311 0 00000         00   000000 001123456788


Q ss_pred             HHHhcccCCCCCCCC-HHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPS-MKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt-~~~v~~~L~~~~~  107 (145)
                      ++.+||..+|.+|++ +.++...|+...+
T Consensus       264 LI~rcL~~DP~kR~ss~eeLl~~Le~~lq  292 (932)
T PRK13184        264 IAMKALAVDPAERYSSVQELKQDLEPHLQ  292 (932)
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            999999999999965 5566666766543

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.08  E-value=1.1e-09  Score=79.73  Aligned_cols=100  Identities=15%  Similarity=0.107  Sum_probs=57.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHH-HHh-------HhhhhhC-----cch
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCF-IAK-------ELNKLVG-----EDE   67 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~-----~~~   67 (145)
                      +|||++.+..++.++|||||||+++||++|..++...........+........ ...       .+...+.     ...
T Consensus       335 ~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~  414 (501)
T PHA03210        335 NSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAG  414 (501)
T ss_pred             CCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCc
Confidence            589999888899999999999999999998754322111111111111000000 000       0000000     000


Q ss_pred             -hh-----cHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 -EV-----DLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 -~~-----~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                       ..     .......+.+++.+|+..||.+||++.+++.
T Consensus       415 ~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~  453 (501)
T PHA03210        415 HSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA  453 (501)
T ss_pred             cchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence             00     0011234677899999999999999999986

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.08  E-value=7.8e-11  Score=77.65  Aligned_cols=76  Identities=20%  Similarity=0.183  Sum_probs=53.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ++||++.+..++.++|+|++|++++++++|..++......                  ....  .....+......+.++
T Consensus       149 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~------------------~~~~--~~~~~~~~~~~~~~~l  208 (237)
T cd05576         149 CAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG------------------INTH--TTLNIPEWVSEEARSL  208 (237)
T ss_pred             cCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh------------------cccc--cccCCcccCCHHHHHH
Confidence            5899887777888999999999999999998765422000                  0000  0001222335568899


Q ss_pred             HHhcccCCCCCCCCHH
Q 032213           81 RLLCIQDEPNLRPSMK   96 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~   96 (145)
                      +.+||+.||.+|+++.
T Consensus       209 i~~~l~~dp~~R~~~~  224 (237)
T cd05576         209 LQQLLQFNPTERLGAG  224 (237)
T ss_pred             HHHHccCCHHHhcCCC
Confidence            9999999999999973

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.07  E-value=1.7e-11  Score=84.53  Aligned_cols=87  Identities=17%  Similarity=0.239  Sum_probs=56.5

Q ss_pred             CCCcccc------cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHH
Q 032213            1 MSPEWQN------SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTL   74 (145)
Q Consensus         1 ~aPe~~~------~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (145)
                      +|||++.      ...++.++|+||||++++++++|..||...........+.          .......  .+......
T Consensus       170 ~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~----------~~~~~~~--~~~~~~~~  237 (330)
T cd05601         170 IAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIM----------NFQRFLK--FPEDPKVS  237 (330)
T ss_pred             cCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHH----------cCCCccC--CCCCCCCC
Confidence            5788875      3457789999999999999999999986431111000000          0000000  01111234


Q ss_pred             HHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           75 ETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        75 ~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ..+.+|+.+|+. +|.+||++.+++.
T Consensus       238 ~~~~~li~~ll~-~p~~R~t~~~l~~  262 (330)
T cd05601         238 SDFLDLIQSLLC-GQKERLGYEGLCC  262 (330)
T ss_pred             HHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence            567889999998 9999999999874

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.06  E-value=3.2e-10  Score=76.74  Aligned_cols=88  Identities=16%  Similarity=0.225  Sum_probs=56.4

Q ss_pred             CCCccccc--CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHH
Q 032213            1 MSPEWQNS--GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~--~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (145)
                      ++||++..  ..++.++|+|+||++++++++|..|+...........+..            .+.....+.+......+.
T Consensus       173 ~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~  240 (290)
T cd05613         173 MAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISR------------RILKSEPPYPQEMSALAK  240 (290)
T ss_pred             CChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHH------------HhhccCCCCCccCCHHHH
Confidence            47888764  2467789999999999999999998753211111111111            011111122333456688


Q ss_pred             HHHHhcccCCCCCCC-----CHHHHHH
Q 032213           79 RVRLLCIQDEPNLRP-----SMKNVIL  100 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rp-----t~~~v~~  100 (145)
                      +++.+||..+|.+|+     ++.+++.
T Consensus       241 ~ll~~~l~~~p~~R~~~~~~~~~~l~~  267 (290)
T cd05613         241 DIIQRLLMKDPKKRLGCGPSDADEIKK  267 (290)
T ss_pred             HHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence            999999999999997     5666644

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.06  E-value=1.2e-10  Score=81.66  Aligned_cols=85  Identities=16%  Similarity=0.177  Sum_probs=57.7

Q ss_pred             CCCcccccC----CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCc--chhhc--HH
Q 032213            1 MSPEWQNSG----LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGE--DEEVD--LR   72 (145)
Q Consensus         1 ~aPe~~~~~----~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~   72 (145)
                      ||||++.+.    .++.++|+||+||+++|+++|..||......    ...            ..+...  ....+  ..
T Consensus       210 ~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~----~~~------------~~i~~~~~~~~~~~~~~  273 (370)
T cd05596         210 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV----GTY------------SKIMDHKNSLTFPDDIE  273 (370)
T ss_pred             ECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH----HHH------------HHHHcCCCcCCCCCcCC
Confidence            578887543    3778999999999999999999998754111    000            011110  01111  12


Q ss_pred             HHHHHHHHHHhcccCCCCC--CCCHHHHHHH
Q 032213           73 TLETMVRVRLLCIQDEPNL--RPSMKNVILM  101 (145)
Q Consensus        73 ~~~~~~~l~~~cl~~~p~~--Rpt~~~v~~~  101 (145)
                      .+..+.+|+.+|+..+|.+  |+++.+++..
T Consensus       274 ~s~~~~~li~~~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         274 ISKQAKDLICAFLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             CCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence            3567889999999998987  9999999753

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.05  E-value=8.8e-11  Score=82.57  Aligned_cols=87  Identities=15%  Similarity=0.170  Sum_probs=54.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+||+++||++|..||..............+          ..  ....+..........++
T Consensus       215 ~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~----------~~--~~~~p~~~~~s~~~~~l  282 (382)
T cd05625         215 IAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINW----------QT--SLHIPPQAKLSPEASDL  282 (382)
T ss_pred             CCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHcc----------CC--CcCCCCcccCCHHHHHH
Confidence            6899998888999999999999999999999999754211111111100          00  00001111223445666


Q ss_pred             HHhcccCCCCCCCC---HHHHHH
Q 032213           81 RLLCIQDEPNLRPS---MKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt---~~~v~~  100 (145)
                      +.+++ .+|.+|++   +.+++.
T Consensus       283 i~~l~-~~p~~R~~~~~~~ei~~  304 (382)
T cd05625         283 IIKLC-RGPEDRLGKNGADEIKA  304 (382)
T ss_pred             HHHHc-cCHhHcCCCCCHHHHhc
Confidence            66654 48999987   777664

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.05  E-value=3e-11  Score=83.34  Aligned_cols=84  Identities=15%  Similarity=0.122  Sum_probs=55.7

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcH-HHHHHHH
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDL-RTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   78 (145)
                      ||||++.+. .++.++|+||+|+++++|++|..|+.....    ..+...            +.......+. .....+.
T Consensus       163 ~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~----~~~~~~------------i~~~~~~~~~~~~~~~~~  226 (330)
T cd05586         163 LAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT----QQMYRN------------IAFGKVRFPKNVLSDEGR  226 (330)
T ss_pred             cCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH----HHHHHH------------HHcCCCCCCCccCCHHHH
Confidence            689988654 478899999999999999999999864311    111100            0000001111 1245678


Q ss_pred             HHHHhcccCCCCCCC----CHHHHHH
Q 032213           79 RVRLLCIQDEPNLRP----SMKNVIL  100 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rp----t~~~v~~  100 (145)
                      +++.+||..+|.+||    ++.+++.
T Consensus       227 ~li~~~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         227 QFVKGLLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             HHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence            999999999999998    5666654

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.04  E-value=7.5e-11  Score=82.34  Aligned_cols=87  Identities=13%  Similarity=0.130  Sum_probs=56.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++....++.++|+||+||+++|+++|..||...........+..+          ...+.  .+........+.++
T Consensus       206 ~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~----------~~~~~--~~~~~~~s~~~~~l  273 (364)
T cd05599         206 IAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINW----------KETLQ--FPDEVPLSPEAKDL  273 (364)
T ss_pred             cCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcC----------CCccC--CCCCCCCCHHHHHH
Confidence            5899988888999999999999999999999998754111110000000          00000  00011124567888


Q ss_pred             HHhcccCCCCCCCC---HHHHHH
Q 032213           81 RLLCIQDEPNLRPS---MKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt---~~~v~~  100 (145)
                      +.+|+. +|.+|++   +.+++.
T Consensus       274 i~~ll~-~p~~R~~~~~~~~ll~  295 (364)
T cd05599         274 IKRLCC-EAERRLGNNGVNEIKS  295 (364)
T ss_pred             HHHHcc-CHhhcCCCCCHHHHhc
Confidence            888986 8999997   888865

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.04  E-value=4.7e-10  Score=81.89  Aligned_cols=87  Identities=16%  Similarity=0.201  Sum_probs=61.7

Q ss_pred             CCCcccc-----cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHH
Q 032213            1 MSPEWQN-----SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLE   75 (145)
Q Consensus         1 ~aPe~~~-----~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (145)
                      ||||++.     ...|.-++|||||||.++||.-+.+|-....+.+....+.             .--++.+..|..-..
T Consensus       197 MAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKia-------------KSePPTLlqPS~Ws~  263 (1187)
T KOG0579|consen  197 MAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA-------------KSEPPTLLQPSHWSR  263 (1187)
T ss_pred             ccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHh-------------hcCCCcccCcchhhh
Confidence            7898875     4468899999999999999999988866442222221111             011122233444466


Q ss_pred             HHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           76 TMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        76 ~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+.+++.+||..||..||++.+++.
T Consensus       264 ~F~DfLk~cL~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  264 SFSDFLKRCLVKNPRNRPPAAQLLK  288 (1187)
T ss_pred             HHHHHHHHHHhcCCccCCCHHHHhh
Confidence            7899999999999999999999975

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.03  E-value=1.8e-10  Score=76.65  Aligned_cols=76  Identities=14%  Similarity=0.129  Sum_probs=58.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||.+.+..+..++|-|+|||+++||+.|.+||.....                ...+..++..+...|......+.+|
T Consensus       208 LAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~----------------~~iY~KI~~~~v~fP~~fs~~~kdL  271 (355)
T KOG0616|consen  208 LAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP----------------IQIYEKILEGKVKFPSYFSSDAKDL  271 (355)
T ss_pred             cChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh----------------HHHHHHHHhCcccCCcccCHHHHHH
Confidence            689999999999999999999999999999999986522                1122334445555666667778888


Q ss_pred             HHhcccCCCCCC
Q 032213           81 RLLCIQDEPNLR   92 (145)
Q Consensus        81 ~~~cl~~~p~~R   92 (145)
                      +...++.|-.+|
T Consensus       272 l~~LL~vD~t~R  283 (355)
T KOG0616|consen  272 LKKLLQVDLTKR  283 (355)
T ss_pred             HHHHHhhhhHhh
Confidence            888888887777

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.01  E-value=2e-10  Score=75.69  Aligned_cols=88  Identities=22%  Similarity=0.265  Sum_probs=59.7

Q ss_pred             CCCcccc--cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhc---HHHHH
Q 032213            1 MSPEWQN--SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVD---LRTLE   75 (145)
Q Consensus         1 ~aPe~~~--~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~   75 (145)
                      ||||.+.  ...|..++|+||+||.++|+.+|..|+....+.      .+....... +.     .+.+..+   .....
T Consensus       234 mAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~sv------feql~~Vv~-gd-----pp~l~~~~~~~~~s~  301 (361)
T KOG1006|consen  234 MAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSV------FEQLCQVVI-GD-----PPILLFDKECVHYSF  301 (361)
T ss_pred             cChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHH------HHHHHHHHc-CC-----CCeecCcccccccCH
Confidence            7999986  334899999999999999999999998743111      111111000 00     1111112   22456


Q ss_pred             HHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           76 TMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        76 ~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+..++.-|+.+|..+||...++..
T Consensus       302 ~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  302 SMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             HHHHHHHHHhhcccccCcchhhhhc
Confidence            6889999999999999999998864

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.00  E-value=6.3e-11  Score=83.10  Aligned_cols=87  Identities=15%  Similarity=0.157  Sum_probs=55.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++|+||+||+++||++|..||...........+..|.          ...  ..+........+.++
T Consensus       211 ~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~----------~~~--~~~~~~~~s~~~~~l  278 (376)
T cd05598         211 IAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWE----------TTL--HIPSQAKLSREASDL  278 (376)
T ss_pred             cCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccC----------ccc--cCCCCCCCCHHHHHH
Confidence            68999988889999999999999999999999987541111111110000          000  001111223456677


Q ss_pred             HHhcccCCCCCCC---CHHHHHH
Q 032213           81 RLLCIQDEPNLRP---SMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rp---t~~~v~~  100 (145)
                      +.+|+ .+|.+|+   ++.+++.
T Consensus       279 i~~l~-~~p~~R~~~~t~~ell~  300 (376)
T cd05598         279 ILRLC-CGAEDRLGKNGADEIKA  300 (376)
T ss_pred             HHHHh-cCHhhcCCCCCHHHHhC
Confidence            77765 4999999   8888875

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.00  E-value=3.3e-10  Score=79.23  Aligned_cols=37  Identities=22%  Similarity=0.280  Sum_probs=33.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCC
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVN   37 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~   37 (145)
                      +|||++.+..++.++|+|||||+++||++|..||...
T Consensus       203 ~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~  239 (363)
T cd05628         203 IAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE  239 (363)
T ss_pred             cCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCC
Confidence            5899998888999999999999999999999998743

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=98.99  E-value=2.6e-11  Score=81.22  Aligned_cols=87  Identities=15%  Similarity=0.168  Sum_probs=64.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++..-.|..++|+||+|+..+||..|++||....+.+...-+-.             -.++....|..-...+.++
T Consensus       196 MAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT-------------~PPPTF~KPE~WS~~F~DF  262 (502)
T KOG0574|consen  196 MAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPT-------------KPPPTFKKPEEWSSEFNDF  262 (502)
T ss_pred             ccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccC-------------CCCCCCCChHhhhhHHHHH
Confidence            799999888899999999999999999999999986533222111000             0001112344446778999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +..|+-.+|++|.|+.++++
T Consensus       263 i~~CLiK~PE~R~TA~~L~~  282 (502)
T KOG0574|consen  263 IRSCLIKKPEERKTALRLCE  282 (502)
T ss_pred             HHHHhcCCHHHHHHHHHHhh
Confidence            99999999999999998875

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.99  E-value=1.5e-10  Score=81.25  Aligned_cols=88  Identities=15%  Similarity=0.121  Sum_probs=56.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+||+++|+++|..||...........+..|.         ..+.   .+........+.+|
T Consensus       215 ~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~---------~~~~---~p~~~~~s~~~~dl  282 (377)
T cd05629         215 IAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWR---------ETLY---FPDDIHLSVEAEDL  282 (377)
T ss_pred             cCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccC---------CccC---CCCCCCCCHHHHHH
Confidence            58999888889999999999999999999999986431111000010000         0000   00111224567889


Q ss_pred             HHhcccCCCCC---CCCHHHHHHH
Q 032213           81 RLLCIQDEPNL---RPSMKNVILM  101 (145)
Q Consensus        81 ~~~cl~~~p~~---Rpt~~~v~~~  101 (145)
                      +.+|+. +|.+   |+++.+++..
T Consensus       283 i~~lL~-~~~~r~~r~~~~~~l~h  305 (377)
T cd05629         283 IRRLIT-NAENRLGRGGAHEIKSH  305 (377)
T ss_pred             HHHHhc-CHhhcCCCCCHHHHhcC
Confidence            999997 6665   4689888763

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.96  E-value=1.7e-09  Score=75.91  Aligned_cols=88  Identities=15%  Similarity=0.098  Sum_probs=64.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++....|+..+|+||.|++++.|++|..||...........+.        ...+    +-..+..........++
T Consensus       205 ~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~--------~~~~----~f~~~~w~~is~~akd~  272 (382)
T KOG0032|consen  205 VAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAIL--------RGDF----DFTSEPWDDISESAKDF  272 (382)
T ss_pred             cCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHH--------cCCC----CCCCCCccccCHHHHHH
Confidence            68999998899999999999999999999999998652211111000        0000    11113344457778999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+++..+|..|+++.++++
T Consensus       273 i~~ll~~dp~~R~ta~~~L~  292 (382)
T KOG0032|consen  273 IRKLLEFDPRKRLTAAQALQ  292 (382)
T ss_pred             HHHhcccCcccCCCHHHHhc
Confidence            99999999999999999988

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.96  E-value=1.1e-09  Score=75.96  Aligned_cols=100  Identities=12%  Similarity=0.101  Sum_probs=58.2

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHH-------HHHHHHhHhhhh---hC----c
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWV-------YNCFIAKELNKL---VG----E   65 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~---~~----~   65 (145)
                      ++||++.+ ..++.++|+|++|++++++++|..|+...........+....       ............   +.    .
T Consensus       182 ~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (343)
T cd07880         182 RAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKK  261 (343)
T ss_pred             cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcc
Confidence            47887764 357889999999999999999999986442111111110000       000000000000   00    0


Q ss_pred             ch-hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           66 DE-EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        66 ~~-~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .. .........+.+++.+|+..+|.+||++.+++.
T Consensus       262 ~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~  297 (343)
T cd07880         262 DFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA  297 (343)
T ss_pred             hHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            00 011122445789999999999999999999984

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=98.94  E-value=4.5e-10  Score=77.47  Aligned_cols=86  Identities=20%  Similarity=0.336  Sum_probs=55.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++...+|+.|+|+||.|+++|++++|+.||... ...+....+..      ...   ++.   ..+......+.+|
T Consensus       181 MAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~-t~~eL~~~~~k------~~~---~~~---~~~~~~s~~~~~L  247 (429)
T KOG0595|consen  181 MAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE-TPKELLLYIKK------GNE---IVP---VLPAELSNPLREL  247 (429)
T ss_pred             cCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc-CHHHHHHHHhc------ccc---ccC---chhhhccCchhhh
Confidence            8999999999999999999999999999999999743 11111111110      000   110   1122223345677


Q ss_pred             HHhcccCCCCCCCCHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVI   99 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~   99 (145)
                      ...-+..++.+|.++.+-.
T Consensus       248 l~~ll~~~~~~~~~~~~~~  266 (429)
T KOG0595|consen  248 LISLLQRNPKDRISFEDFF  266 (429)
T ss_pred             hhHHHhcCccccCchHHhh
Confidence            7777777777777766543

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.92  E-value=4.9e-09  Score=74.15  Aligned_cols=106  Identities=13%  Similarity=0.112  Sum_probs=70.6

Q ss_pred             CCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCC---chhhHhHHHHH---H----HHHHHh-Hhhhhh-------
Q 032213            2 SPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVS---TADVVLLSTWV---Y----NCFIAK-ELNKLV-------   63 (145)
Q Consensus         2 aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~---~~~~~~~~~~~---~----~~~~~~-~~~~~~-------   63 (145)
                      |||++.+..|+..+|+|||+|++|||+||-.-|.++..   ..+..+++..+   .    .....+ ..++++       
T Consensus       419 apEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~Lr  498 (590)
T KOG1290|consen  419 APEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELR  498 (590)
T ss_pred             CcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhcccccee
Confidence            79999999999999999999999999999877765511   11222222111   0    000000 011111       


Q ss_pred             --------------CcchhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH--HhhccCC
Q 032213           64 --------------GEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL--MLEGTME  107 (145)
Q Consensus        64 --------------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~--~L~~~~~  107 (145)
                                    -.+-..+.+...++.+++.-+|+.+|.+|||+.+.+.  .|+.+..
T Consensus       499 hI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~~~  558 (590)
T KOG1290|consen  499 HIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKHPWLNPVAG  558 (590)
T ss_pred             cccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcCccccCCCC
Confidence                          1111445577888999999999999999999999985  5665544

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=98.90  E-value=1.3e-09  Score=76.52  Aligned_cols=89  Identities=17%  Similarity=0.114  Sum_probs=55.0

Q ss_pred             CCCcccccC----CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHH
Q 032213            1 MSPEWQNSG----LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLET   76 (145)
Q Consensus         1 ~aPe~~~~~----~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (145)
                      ||||++...    .++.++|+||+||+++||++|..||......    ......        .........+........
T Consensus       210 ~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~----~~~~~i--------~~~~~~~~~~~~~~~s~~  277 (371)
T cd05622         210 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV----GTYSKI--------MNHKNSLTFPDDNDISKE  277 (371)
T ss_pred             cCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH----HHHHHH--------HcCCCcccCCCcCCCCHH
Confidence            689988643    3788999999999999999999998743110    000000        000000001112234566


Q ss_pred             HHHHHHhcccCCCC--CCCCHHHHHHH
Q 032213           77 MVRVRLLCIQDEPN--LRPSMKNVILM  101 (145)
Q Consensus        77 ~~~l~~~cl~~~p~--~Rpt~~~v~~~  101 (145)
                      +.+++.+|+..++.  .|+++.+++..
T Consensus       278 ~~~li~~~L~~~~~r~~r~~~~ei~~h  304 (371)
T cd05622         278 AKNLICAFLTDREVRLGRNGVEEIKRH  304 (371)
T ss_pred             HHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence            78899999984443  37889888764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.89  E-value=3.1e-09  Score=74.21  Aligned_cols=77  Identities=18%  Similarity=0.238  Sum_probs=59.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||.+.+..|....|.|+|||+++||+.|+.||...    +...+            +..+.+....+|...+.+...+
T Consensus       517 iAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe----DE~el------------F~aI~ehnvsyPKslSkEAv~i  580 (683)
T KOG0696|consen  517 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE----DEDEL------------FQAIMEHNVSYPKSLSKEAVAI  580 (683)
T ss_pred             cccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC----CHHHH------------HHHHHHccCcCcccccHHHHHH
Confidence            6999999999999999999999999999999999854    11122            2223344445677777788888


Q ss_pred             HHhcccCCCCCCC
Q 032213           81 RLLCIQDEPNLRP   93 (145)
Q Consensus        81 ~~~cl~~~p~~Rp   93 (145)
                      ....+...|.+|.
T Consensus       581 ckg~ltK~P~kRL  593 (683)
T KOG0696|consen  581 CKGLLTKHPGKRL  593 (683)
T ss_pred             HHHHhhcCCcccc
Confidence            8888888887763

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=98.89  E-value=2.3e-09  Score=71.82  Aligned_cols=104  Identities=16%  Similarity=0.201  Sum_probs=69.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      .|||++-..+|....|+||+||++|-+++|.+||+..........+....    ..+. ..+..   +.....+....++
T Consensus       230 vaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI----~~gq-y~FP~---pEWs~VSe~aKdl  301 (400)
T KOG0604|consen  230 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRI----RTGQ-YEFPE---PEWSCVSEAAKDL  301 (400)
T ss_pred             cCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHh----hccC-ccCCC---hhHhHHHHHHHHH
Confidence            47999988889999999999999999999999998642211111111000    0000 00111   2233456778899


Q ss_pred             HHhcccCCCCCCCCHHHHHH--HhhccCCCCCCC
Q 032213           81 RLLCIQDEPNLRPSMKNVIL--MLEGTMEIPVVP  112 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~--~L~~~~~~~~~~  112 (145)
                      +.+.|..+|++|.|+.+++.  +++.-..++.++
T Consensus       302 IR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~tp  335 (400)
T KOG0604|consen  302 IRKLLKTEPTERLTIEEVMDHPWINQYEAVPQTP  335 (400)
T ss_pred             HHHHhcCCchhheeHHHhhcCchhcccccCCCCC
Confidence            99999999999999999987  455555555443

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=98.88  E-value=2.4e-10  Score=79.78  Aligned_cols=37  Identities=22%  Similarity=0.280  Sum_probs=33.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCC
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVN   37 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~   37 (145)
                      +|||++.+..++.++|+||+||+++||++|..||...
T Consensus       203 ~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~  239 (360)
T cd05627         203 IAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE  239 (360)
T ss_pred             cCHHHHcCCCCCCcceeccccceeeecccCCCCCCCC
Confidence            6899998888999999999999999999999998754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=98.88  E-value=1.6e-09  Score=76.01  Aligned_cols=85  Identities=18%  Similarity=0.209  Sum_probs=54.9

Q ss_pred             CCCcccccC----CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCc--ch--hhcHH
Q 032213            1 MSPEWQNSG----LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGE--DE--EVDLR   72 (145)
Q Consensus         1 ~aPe~~~~~----~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~   72 (145)
                      ||||++.+.    .++.++|+||+|+++++|++|..||.......    ..            ..+...  ..  +....
T Consensus       210 ~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~----~~------------~~i~~~~~~~~~p~~~~  273 (370)
T cd05621         210 ISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVG----TY------------SKIMDHKNSLNFPEDVE  273 (370)
T ss_pred             CCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHH----HH------------HHHHhCCcccCCCCccc
Confidence            689988643    37789999999999999999999987441110    00            001110  01  11112


Q ss_pred             HHHHHHHHHHhcccCCCC--CCCCHHHHHHH
Q 032213           73 TLETMVRVRLLCIQDEPN--LRPSMKNVILM  101 (145)
Q Consensus        73 ~~~~~~~l~~~cl~~~p~--~Rpt~~~v~~~  101 (145)
                      ....+.+++.+|+..++.  .|+++.+++..
T Consensus       274 ~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         274 ISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             CCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence            355677888888875553  38899998764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.87  E-value=2.4e-09  Score=75.46  Aligned_cols=87  Identities=18%  Similarity=0.247  Sum_probs=62.1

Q ss_pred             CCCcccccCC----cccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhc--HHHH
Q 032213            1 MSPEWQNSGL----ITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVD--LRTL   74 (145)
Q Consensus         1 ~aPe~~~~~~----~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~   74 (145)
                      ||||.+.++.    .+.+.|||++||.+|.++.|+.||...    ....+            +.+++...+..|  ++..
T Consensus       282 ~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~----~~~~l------------~~KIvn~pL~fP~~pe~~  345 (576)
T KOG0585|consen  282 FAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD----FELEL------------FDKIVNDPLEFPENPEIN  345 (576)
T ss_pred             cchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc----hHHHH------------HHHHhcCcccCCCccccc
Confidence            6899887633    347899999999999999999999743    11111            122333333222  2346


Q ss_pred             HHHHHHHHhcccCCCCCCCCHHHHHHHhh
Q 032213           75 ETMVRVRLLCIQDEPNLRPSMKNVILMLE  103 (145)
Q Consensus        75 ~~~~~l~~~cl~~~p~~Rpt~~~v~~~L~  103 (145)
                      ..+.+|+.++|.+||.+|.+..+|.....
T Consensus       346 e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw  374 (576)
T KOG0585|consen  346 EDLKDLIKRLLEKDPEQRITLPDIKLHPW  374 (576)
T ss_pred             HHHHHHHHHHhhcChhheeehhhheecce
Confidence            77899999999999999999999865443

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=98.85  E-value=7.8e-09  Score=68.66  Aligned_cols=88  Identities=14%  Similarity=0.146  Sum_probs=60.5

Q ss_pred             CCCcccccC------CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHH
Q 032213            1 MSPEWQNSG------LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTL   74 (145)
Q Consensus         1 ~aPe~~~~~------~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (145)
                      +|||.+...      .|+...|.|+.|++++-++.|++||-..    .+..+....    ..+.    ..-..+...+..
T Consensus       189 LAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR----kQmlMLR~I----meGk----yqF~speWadis  256 (411)
T KOG0599|consen  189 LAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR----KQMLMLRMI----MEGK----YQFRSPEWADIS  256 (411)
T ss_pred             cChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH----HHHHHHHHH----Hhcc----cccCCcchhhcc
Confidence            578877533      3778899999999999999999998532    111111100    0000    011113344567


Q ss_pred             HHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           75 ETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        75 ~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+..+|+.+|++.||.+|.|..+++.
T Consensus       257 ~~~KdLIsrlLqVdp~~Ritake~La  282 (411)
T KOG0599|consen  257 ATVKDLISRLLQVDPTKRITAKEALA  282 (411)
T ss_pred             ccHHHHHHHHHeeCchhcccHHHHhc
Confidence            77899999999999999999999986

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=98.83  E-value=2.8e-09  Score=73.69  Aligned_cols=90  Identities=13%  Similarity=0.083  Sum_probs=53.7

Q ss_pred             CCCcccc-----cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHH
Q 032213            1 MSPEWQN-----SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLE   75 (145)
Q Consensus         1 ~aPe~~~-----~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (145)
                      ||||++.     ...++.++|+||||++++|+++|..||......    ......   .. ... ..  ..+........
T Consensus       170 ~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~----~~~~~i---~~-~~~-~~--~~p~~~~~~s~  238 (332)
T cd05623         170 ISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLV----ETYGKI---MN-HKE-RF--QFPAQVTDVSE  238 (332)
T ss_pred             cCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHH----HHHHHH---hC-CCc-cc--cCCCccccCCH
Confidence            5889875     345788999999999999999999998743111    111000   00 000 00  00011122355


Q ss_pred             HHHHHHHhcccCCC--CCCCCHHHHHHH
Q 032213           76 TMVRVRLLCIQDEP--NLRPSMKNVILM  101 (145)
Q Consensus        76 ~~~~l~~~cl~~~p--~~Rpt~~~v~~~  101 (145)
                      .+.+|+.+|+..++  ..|+++.+++..
T Consensus       239 ~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         239 DAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             HHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence            67888888775544  347888888754

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.82  E-value=3e-09  Score=72.15  Aligned_cols=84  Identities=19%  Similarity=0.234  Sum_probs=60.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++...-|..+.|.|.+|||++||++|+.||... ...   .+.+            -++-..+..|.....+...|
T Consensus       335 LAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~-dh~---kLFe------------LIl~ed~kFPr~ls~eAktL  398 (516)
T KOG0690|consen  335 LAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK-DHE---KLFE------------LILMEDLKFPRTLSPEAKTL  398 (516)
T ss_pred             cCchhhccccccceeehhhhhHHHHHHHhccCccccc-chh---HHHH------------HHHhhhccCCccCCHHHHHH
Confidence            5899998889999999999999999999999999854 111   1111            12223334555556677888


Q ss_pred             HHhcccCCCCCCC-----CHHHHHH
Q 032213           81 RLLCIQDEPNLRP-----SMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rp-----t~~~v~~  100 (145)
                      +...+.++|.+|.     .+.+|.+
T Consensus       399 LsGLL~kdP~kRLGgGpdDakEi~~  423 (516)
T KOG0690|consen  399 LSGLLKKDPKKRLGGGPDDAKEIMR  423 (516)
T ss_pred             HHHHhhcChHhhcCCCchhHHHHHh
Confidence            8999999998874     3555553

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.82  E-value=1e-09  Score=76.64  Aligned_cols=104  Identities=19%  Similarity=0.259  Sum_probs=62.4

Q ss_pred             CCCcccccCC----cc--cccchhhHHHHHHHHHhC----------CCCCCCCCCc-hhhHhHHHHHHHHHHHhHhhhhh
Q 032213            1 MSPEWQNSGL----IT--VKSDVYSFGVVLLEIVCC----------RSNFEVNVST-ADVVLLSTWVYNCFIAKELNKLV   63 (145)
Q Consensus         1 ~aPe~~~~~~----~~--~~~dv~s~g~v~~el~~g----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   63 (145)
                      ||||++....    |.  ..+|||+||.|+||+..+          +.||....+. .....+..-++    ...+++.+
T Consensus       387 MAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVC----v~~~RP~i  462 (513)
T KOG2052|consen  387 MAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVC----VQKLRPNI  462 (513)
T ss_pred             cChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhccee----ecccCCCC
Confidence            8999986432    11  468999999999999753          2344432111 11111110000    00111111


Q ss_pred             CcchhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHhhccCCCC
Q 032213           64 GEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIP  109 (145)
Q Consensus        64 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~~  109 (145)
                      +.+.. .......+.++|..||..||..|-|+-.+-..|.++.+.+
T Consensus       463 pnrW~-s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~~  507 (513)
T KOG2052|consen  463 PNRWK-SDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNSD  507 (513)
T ss_pred             Ccccc-cCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcCh
Confidence            11111 2245677899999999999999999999988888877654

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=98.81  E-value=3.5e-09  Score=74.43  Aligned_cols=81  Identities=19%  Similarity=0.255  Sum_probs=59.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++..+.|+...|.|++||+++||+.|..||..+........+.            ..+......++...+.+...|
T Consensus       353 MAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvd------------rr~~~~~~ey~~kFS~eaksl  420 (591)
T KOG0986|consen  353 MAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVD------------RRTLEDPEEYSDKFSEEAKSL  420 (591)
T ss_pred             cCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHH------------HHHhcchhhcccccCHHHHHH
Confidence            89999999899999999999999999999999997542211111111            112222234556667788899


Q ss_pred             HHhcccCCCCCCC
Q 032213           81 RLLCIQDEPNLRP   93 (145)
Q Consensus        81 ~~~cl~~~p~~Rp   93 (145)
                      ....|.+||.+|-
T Consensus       421 c~~LL~Kdp~~RL  433 (591)
T KOG0986|consen  421 CEGLLTKDPEKRL  433 (591)
T ss_pred             HHHHHccCHHHhc
Confidence            9999999998774

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.81  E-value=8.2e-09  Score=73.20  Aligned_cols=98  Identities=9%  Similarity=0.082  Sum_probs=63.8

Q ss_pred             CCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhh-------hhhCcchhhc---
Q 032213            2 SPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN-------KLVGEDEEVD---   70 (145)
Q Consensus         2 aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~---   70 (145)
                      +||.+.+ ..|+.+.|+||.|||+.||+.|++.+... ...++.+.+-..+.......+.       ..+.+..++.   
T Consensus       287 pPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~-tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l  365 (560)
T KOG0600|consen  287 PPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGR-TEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRL  365 (560)
T ss_pred             ChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCc-cHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchH
Confidence            6888875 46999999999999999999999887754 3344444443332222112121       1111111111   


Q ss_pred             ----HHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           71 ----LRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        71 ----~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                          ...+....+|+..+|..||++|.|+.+++.
T Consensus       366 ~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  366 RETFKDFPASALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             HHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence                123456789999999999999999998865

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=98.80  E-value=1.4e-08  Score=74.89  Aligned_cols=25  Identities=12%  Similarity=-0.059  Sum_probs=22.6

Q ss_pred             HHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           76 TMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        76 ~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ...+|+.+|+..||.+|||+.++++
T Consensus       425 ~~~dLi~~mL~~dP~kR~ta~e~L~  449 (566)
T PLN03225        425 AGWELLKSMMRFKGRQRISAKAALA  449 (566)
T ss_pred             HHHHHHHHHccCCcccCCCHHHHhC
Confidence            3568999999999999999999986

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=98.77  E-value=1.9e-08  Score=72.14  Aligned_cols=103  Identities=21%  Similarity=0.276  Sum_probs=66.3

Q ss_pred             CCCcccccCC-------cccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHH
Q 032213            1 MSPEWQNSGL-------ITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRT   73 (145)
Q Consensus         1 ~aPe~~~~~~-------~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (145)
                      .|||.++...       .+.++|+||||+++.|+++...|+...........++.....     .....+.+......+.
T Consensus       118 ~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~-----~~~~~~rP~i~~~~e~  192 (484)
T KOG1023|consen  118 TAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKK-----GGSNPFRPSIELLNEL  192 (484)
T ss_pred             cCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHh-----cCCCCcCcchhhhhhc
Confidence            3678776431       456799999999999999999998764222222222222111     1111222222111144


Q ss_pred             HHHHHHHHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           74 LETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        74 ~~~~~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      ...+..++..||..+|..||++.++-..++.+...
T Consensus       193 ~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~  227 (484)
T KOG1023|consen  193 PPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG  227 (484)
T ss_pred             chHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence            44789999999999999999999998887765553

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=98.77  E-value=6.9e-09  Score=68.36  Aligned_cols=99  Identities=10%  Similarity=0.081  Sum_probs=60.8

Q ss_pred             CCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhh-----------hCcch--
Q 032213            2 SPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKL-----------VGEDE--   67 (145)
Q Consensus         2 aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~--   67 (145)
                      |||.+.+ ..|....|+||.||++.|++.|.+-+... +..++...+-..........+.++           ++...  
T Consensus       169 APELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~-sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~  247 (318)
T KOG0659|consen  169 APELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGD-SDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLN  247 (318)
T ss_pred             ChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCC-chHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccc
Confidence            6888774 46899999999999999999776544432 333333332222111111111111           01100  


Q ss_pred             hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 032213           68 EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        68 ~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      ..-........+|+..+|..||.+|.+++|++..
T Consensus       248 ~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~  281 (318)
T KOG0659|consen  248 NLFPAASSDALDLLSKMLTYNPKKRITASQALKH  281 (318)
T ss_pred             cccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence            1112234456999999999999999999999764

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=98.76  E-value=1.8e-08  Score=69.67  Aligned_cols=90  Identities=16%  Similarity=0.072  Sum_probs=52.0

Q ss_pred             CCCccccc-----CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHH
Q 032213            1 MSPEWQNS-----GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLE   75 (145)
Q Consensus         1 ~aPe~~~~-----~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (145)
                      ||||++..     ..++.++|+||+||+++++++|..||..... ..   ....   .....   ..... .......+.
T Consensus       170 ~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~-~~---~~~~---i~~~~---~~~~~-~~~~~~~~~  238 (331)
T cd05597         170 ISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL-VE---TYGK---IMNHK---EHFQF-PPDVTDVSE  238 (331)
T ss_pred             cCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH-HH---HHHH---HHcCC---CcccC-CCccCCCCH
Confidence            58888752     4567899999999999999999999864311 11   0000   00000   00000 011112344


Q ss_pred             HHHHHHHhcccC--CCCCCCCHHHHHHH
Q 032213           76 TMVRVRLLCIQD--EPNLRPSMKNVILM  101 (145)
Q Consensus        76 ~~~~l~~~cl~~--~p~~Rpt~~~v~~~  101 (145)
                      .+.+++.+|+..  ++..|+++.+++..
T Consensus       239 ~~~~li~~ll~~~~~r~~r~~~~~~l~h  266 (331)
T cd05597         239 EAKDLIRRLICSPETRLGRNGLQDFKDH  266 (331)
T ss_pred             HHHHHHHHHccCcccccCCCCHHHHhcC
Confidence            567777776654  33458899888763

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=98.75  E-value=1e-08  Score=69.98  Aligned_cols=98  Identities=17%  Similarity=0.147  Sum_probs=64.6

Q ss_pred             CCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCc-------ch-h----
Q 032213            2 SPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGE-------DE-E----   68 (145)
Q Consensus         2 aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-~----   68 (145)
                      |||.+.+ ..|+.+.||||.|||+.||+-|++-|... +...+...+-..........+...-..       .. .    
T Consensus       193 aPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~-s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~  271 (364)
T KOG0658|consen  193 APELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGD-SSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWH  271 (364)
T ss_pred             CHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCC-CHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccce
Confidence            7888875 45999999999999999999999877754 433333333222222222222211111       00 1    


Q ss_pred             --hcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           69 --VDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        69 --~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                        ..........+|+.+++..+|.+|.+..+++.
T Consensus       272 ~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~  305 (364)
T KOG0658|consen  272 KVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA  305 (364)
T ss_pred             eecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence              12234567899999999999999999998875

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=98.74  E-value=2.2e-08  Score=70.64  Aligned_cols=111  Identities=18%  Similarity=0.149  Sum_probs=66.6

Q ss_pred             CCCcccccCCcc------cccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhh-Cc----chh-
Q 032213            1 MSPEWQNSGLIT------VKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLV-GE----DEE-   68 (145)
Q Consensus         1 ~aPe~~~~~~~~------~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~-   68 (145)
                      ||||++.+...-      .+.|||++|.|+||+++++..+.....+..+..+-..+......+.++.++ ..    ..+ 
T Consensus       385 MAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~  464 (534)
T KOG3653|consen  385 MAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPD  464 (534)
T ss_pred             cCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChh
Confidence            899999754322      468999999999999988765542211111111111111111112222221 11    111 


Q ss_pred             hcH--HHHHHHHHHHHhcccCCCCCCCCHHHHHHHhhccCCCCCC
Q 032213           69 VDL--RTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVV  111 (145)
Q Consensus        69 ~~~--~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~~~~  111 (145)
                      ...  ..+..+.+.+..||..|++.|.|+.=|.+++.++....+.
T Consensus       465 ~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~  509 (534)
T KOG3653|consen  465 AWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED  509 (534)
T ss_pred             hhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence            000  2356688899999999999999999998888887765543

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=98.74  E-value=5.8e-09  Score=72.12  Aligned_cols=89  Identities=15%  Similarity=0.099  Sum_probs=52.8

Q ss_pred             CCCccccc-----CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHH
Q 032213            1 MSPEWQNS-----GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLE   75 (145)
Q Consensus         1 ~aPe~~~~-----~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (145)
                      ||||++.+     ..++.++|+||||++++++++|+.|+......    ......   . .......++   ........
T Consensus       170 ~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~----~~~~~i---~-~~~~~~~~p---~~~~~~~~  238 (331)
T cd05624         170 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV----ETYGKI---M-NHEERFQFP---SHITDVSE  238 (331)
T ss_pred             CCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHH----HHHHHH---H-cCCCcccCC---CccccCCH
Confidence            57888764     45788999999999999999999998643111    000000   0 000000000   11112345


Q ss_pred             HHHHHHHhcccCCCCC--CCCHHHHHH
Q 032213           76 TMVRVRLLCIQDEPNL--RPSMKNVIL  100 (145)
Q Consensus        76 ~~~~l~~~cl~~~p~~--Rpt~~~v~~  100 (145)
                      .+.+++.+|+..++..  |+++.+++.
T Consensus       239 ~~~~li~~ll~~~~~~~~~~~~~~~~~  265 (331)
T cd05624         239 EAKDLIQRLICSRERRLGQNGIEDFKK  265 (331)
T ss_pred             HHHHHHHHHccCchhhcCCCCHHHHhc
Confidence            6788888888765543  467777764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.73  E-value=1.3e-08  Score=78.51  Aligned_cols=86  Identities=19%  Similarity=0.276  Sum_probs=52.6

Q ss_pred             CCCcccccC---CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHH
Q 032213            1 MSPEWQNSG---LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~~~---~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (145)
                      +|||.+.+.   .|+.|+|+||+|||++||+.-   |...  . +.......    .....+    +............-
T Consensus       782 vAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yP---F~Ts--M-ERa~iL~~----LR~g~i----P~~~~f~~~~~~~e  847 (1351)
T KOG1035|consen  782 VAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYP---FGTS--M-ERASILTN----LRKGSI----PEPADFFDPEHPEE  847 (1351)
T ss_pred             ecHHHhcccccccccchhhhHHHHHHHHHHhcc---CCch--H-HHHHHHHh----cccCCC----CCCcccccccchHH
Confidence            589988643   599999999999999999753   4322  1 11111000    001111    00011122234445


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHH
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ..++.++++.||.+|||+.+++.
T Consensus       848 ~slI~~Ll~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  848 ASLIRWLLSHDPSKRPTATELLN  870 (1351)
T ss_pred             HHHHHHHhcCCCccCCCHHHHhh
Confidence            77899999999999999999964

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=98.65  E-value=4.2e-08  Score=70.12  Aligned_cols=85  Identities=15%  Similarity=0.186  Sum_probs=60.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||.+....+..++|.|++||+++|+++|.+||....+......+....              ..+..|....+...+|
T Consensus       586 VAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGi--------------d~i~~Pr~I~k~a~~L  651 (732)
T KOG0614|consen  586 VAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGI--------------DKIEFPRRITKTATDL  651 (732)
T ss_pred             ccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhh--------------hhhhcccccchhHHHH
Confidence            47888877778899999999999999999999998653322221111110              1123455667778899


Q ss_pred             HHhcccCCCCCCCC-----HHHHH
Q 032213           81 RLLCIQDEPNLRPS-----MKNVI   99 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt-----~~~v~   99 (145)
                      +.+.+..+|.+|--     +.++-
T Consensus       652 ik~LCr~~P~ERLG~~~~gI~DIk  675 (732)
T KOG0614|consen  652 IKKLCRDNPTERLGYQKGGINDIK  675 (732)
T ss_pred             HHHHHhcCcHhhhccccCChHHHH
Confidence            99999999988865     55554

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=98.54  E-value=4.7e-08  Score=73.40  Aligned_cols=87  Identities=15%  Similarity=0.199  Sum_probs=64.1

Q ss_pred             CCCccccc-----CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHH
Q 032213            1 MSPEWQNS-----GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLE   75 (145)
Q Consensus         1 ~aPe~~~~-----~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (145)
                      ||||++..     ..|+..+|+||+||..+||..|.+|++...+......+             .+-.++++..+..-..
T Consensus       190 MAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~I-------------pRNPPPkLkrp~kWs~  256 (953)
T KOG0587|consen  190 MAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI-------------PRNPPPKLKRPKKWSK  256 (953)
T ss_pred             ccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccC-------------CCCCCccccchhhHHH
Confidence            89999963     34788999999999999999999998865332221110             0111223344556677


Q ss_pred             HHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           76 TMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        76 ~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+.+++..|+..+-..||++.++++
T Consensus       257 ~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  257 KFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             HHHHHHHHHHhhccccCcchhhhcc
Confidence            8999999999999999999998874

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.51  E-value=1.3e-07  Score=64.27  Aligned_cols=99  Identities=15%  Similarity=0.104  Sum_probs=61.2

Q ss_pred             CCCcccc-----cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcH----
Q 032213            1 MSPEWQN-----SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDL----   71 (145)
Q Consensus         1 ~aPe~~~-----~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----   71 (145)
                      ||||++.     ...|..+-|.||+|||+|-|++|..||..+....-.+. .+..+..-....+..+-.-+-..|.    
T Consensus       253 MAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWd-rGe~Cr~CQ~~LFesIQEGkYeFPdkdWa  331 (463)
T KOG0607|consen  253 MAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWD-RGEVCRVCQNKLFESIQEGKYEFPDKDWA  331 (463)
T ss_pred             cchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCcc-CCCccHHHHHHHHHHHhccCCcCChhhhH
Confidence            7999874     23478899999999999999999999987633211100 0001111111111112222222222    


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           72 RTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        72 ~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ....+..+++...+.+++..|-++.+++.
T Consensus       332 hIS~eakdlisnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  332 HISSEAKDLISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             HhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence            33556778888899999999999988875

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=98.51  E-value=1.4e-07  Score=64.20  Aligned_cols=98  Identities=13%  Similarity=0.075  Sum_probs=59.2

Q ss_pred             CCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhC----------cch---
Q 032213            2 SPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVG----------EDE---   67 (145)
Q Consensus         2 aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~---   67 (145)
                      |||.+.+ ..|++..|+||+||++.|++.+++-|... +..++...+-..........+..+..          ..+   
T Consensus       245 aPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~-sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~  323 (419)
T KOG0663|consen  245 APELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGK-SEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNN  323 (419)
T ss_pred             CHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCC-chHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchh
Confidence            6787774 45899999999999999999988776644 33333222211111111111110000          000   


Q ss_pred             ---hhcHH-HHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 ---EVDLR-TLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 ---~~~~~-~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                         ..+.. ....-.+|+...+..||.+|.|+.+.+.
T Consensus       324 lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~  360 (419)
T KOG0663|consen  324 LRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK  360 (419)
T ss_pred             hhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence               00111 3356688999999999999999998865

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=98.47  E-value=2.4e-07  Score=63.00  Aligned_cols=99  Identities=16%  Similarity=0.153  Sum_probs=59.6

Q ss_pred             CCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhh---Ccch----------
Q 032213            2 SPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLV---GEDE----------   67 (145)
Q Consensus         2 aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----------   67 (145)
                      |||++.+. .|+...|+||+||++.||++++.-|... ....+...+-..........+..+.   +-+.          
T Consensus       188 aPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~-se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~  266 (323)
T KOG0594|consen  188 APEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGD-SEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKD  266 (323)
T ss_pred             CHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCC-cHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccc
Confidence            78888755 6999999999999999999987766544 2222222111111111111111110   0000          


Q ss_pred             --hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 032213           68 --EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        68 --~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                        ..-+.......+++..|++.+|.+|.++..++..
T Consensus       267 l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  267 LSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             hHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence              0001112467899999999999999999988764

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.45  E-value=2.3e-07  Score=63.55  Aligned_cols=84  Identities=15%  Similarity=0.285  Sum_probs=55.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCC-CchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNV-STADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||.+++..|....|.|++|++++||+.|+.||..-. ...+.. .-++...        -++...+..|....-....
T Consensus       418 iapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~n-tedylfq--------vilekqiriprslsvkas~  488 (593)
T KOG0695|consen  418 IAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMN-TEDYLFQ--------VILEKQIRIPRSLSVKASH  488 (593)
T ss_pred             cchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccc-hhHHHHH--------HHhhhcccccceeehhhHH
Confidence            58999999999999999999999999999999997531 111111 0011111        1222223344444445566


Q ss_pred             HHHhcccCCCCCCC
Q 032213           80 VRLLCIQDEPNLRP   93 (145)
Q Consensus        80 l~~~cl~~~p~~Rp   93 (145)
                      ++...+.+||++|.
T Consensus       489 vlkgflnkdp~erl  502 (593)
T KOG0695|consen  489 VLKGFLNKDPKERL  502 (593)
T ss_pred             HHHHhhcCCcHHhc
Confidence            77788888888764

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.44  E-value=3.1e-07  Score=58.59  Aligned_cols=54  Identities=31%  Similarity=0.506  Sum_probs=44.5

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ++||..... ..+.+.|+|++|++++++                                               ..+.+
T Consensus       160 ~~pe~~~~~~~~~~~~D~~~lg~~~~~l-----------------------------------------------~~~~~  192 (215)
T cd00180         160 MAPEVLLGKGYYSEKSDIWSLGVILYEL-----------------------------------------------PELKD  192 (215)
T ss_pred             cChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------------------HHHHH
Confidence            356766655 677889999999999998                                               23678


Q ss_pred             HHHhcccCCCCCCCCHHHHHHH
Q 032213           80 VRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      ++..|+..+|.+||++.+++..
T Consensus       193 ~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         193 LIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             HHHHHhhCCcccCcCHHHHhhC
Confidence            8899999999999999998754

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=98.42  E-value=3e-07  Score=64.42  Aligned_cols=82  Identities=21%  Similarity=0.249  Sum_probs=56.9

Q ss_pred             CCcccccCCcc-cccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            2 SPEWQNSGLIT-VKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         2 aPe~~~~~~~~-~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      .||.+++..|. ...|.|++||++|-+++|..||..+    +...++....    .+.+     ..++    .+.....|
T Consensus       220 SPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~----Dhk~lvrQIs----~GaY-----rEP~----~PSdA~gL  282 (668)
T KOG0611|consen  220 SPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR----DHKRLVRQIS----RGAY-----REPE----TPSDASGL  282 (668)
T ss_pred             CccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc----hHHHHHHHhh----cccc-----cCCC----CCchHHHH
Confidence            58888888775 6799999999999999999999855    2222221110    0111     1111    23345678


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +..+|..||+.|.|+.+|..
T Consensus       283 IRwmLmVNP~RRATieDiAs  302 (668)
T KOG0611|consen  283 IRWMLMVNPERRATIEDIAS  302 (668)
T ss_pred             HHHHHhcCcccchhHHHHhh
Confidence            88999999999999999964

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=98.41  E-value=4.5e-07  Score=61.40  Aligned_cols=98  Identities=13%  Similarity=0.066  Sum_probs=60.1

Q ss_pred             CCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHh-HHHHH--------HHHHHH-------------hHh
Q 032213            2 SPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVL-LSTWV--------YNCFIA-------------KEL   59 (145)
Q Consensus         2 aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~-~~~~~--------~~~~~~-------------~~~   59 (145)
                      |||++-+..+...+|+||.||++.||+.|..-|... ...++.. .++..        ......             ...
T Consensus       185 apevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~-d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f  263 (369)
T KOG0665|consen  185 APEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK-DHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISF  263 (369)
T ss_pred             CchheeccCCcccchhhhhhhHHHHHhhceEEecCc-hHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccch
Confidence            799998888999999999999999999998766533 1111111 11000        000000             001


Q ss_pred             hhhhCcc-----hhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           60 NKLVGED-----EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        60 ~~~~~~~-----~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ...++..     ............+++.++|-.+|++|.++.+++.
T Consensus       264 ~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~  309 (369)
T KOG0665|consen  264 SELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR  309 (369)
T ss_pred             hhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence            1111111     1112223445688999999999999999999986

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.27  E-value=1.8e-06  Score=57.16  Aligned_cols=99  Identities=9%  Similarity=0.085  Sum_probs=60.2

Q ss_pred             CCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhh---------hh----hCc-c
Q 032213            2 SPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN---------KL----VGE-D   66 (145)
Q Consensus         2 aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~----~~~-~   66 (145)
                      +||.+.+ ..|+...|+|+.||++.||+++.+-+... ....+.+++...+.......+.         .+    +.. .
T Consensus       196 ppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgn-teqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~  274 (376)
T KOG0669|consen  196 PPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGN-TEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQ  274 (376)
T ss_pred             CHHHhhcccccCCcchhHhHHHHHHHHHccCccccCC-hHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcch
Confidence            4666653 45889999999999999999988766543 3344444444333222111111         11    000 0


Q ss_pred             hhhcHHH------HHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 032213           67 EEVDLRT------LETMVRVRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        67 ~~~~~~~------~~~~~~l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      .....+.      .....+|+...+..||++|+++.+++..
T Consensus       275 ~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh  315 (376)
T KOG0669|consen  275 KRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH  315 (376)
T ss_pred             hhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence            0001111      2256789999999999999999998753

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.23  E-value=3.7e-07  Score=66.17  Aligned_cols=84  Identities=17%  Similarity=0.165  Sum_probs=61.2

Q ss_pred             CCcccccCCc-ccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            2 SPEWQNSGLI-TVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         2 aPe~~~~~~~-~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      |||+..+..| ....|+|++|++++.++.|..||....-.    .+.            .+++..+...+.-....+.++
T Consensus       222 aPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk----~Lr------------~rvl~gk~rIp~~ms~dce~l  285 (596)
T KOG0586|consen  222 APELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK----ELR------------PRVLRGKYRIPFYMSCDCEDL  285 (596)
T ss_pred             ChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc----ccc------------chheeeeecccceeechhHHH
Confidence            6888887665 47899999999999999999999854111    000            011122223444556678999


Q ss_pred             HHhcccCCCCCCCCHHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      +.+.+..+|.+|+++.++++.
T Consensus       286 Lrk~lvl~Pskr~~~dqim~~  306 (596)
T KOG0586|consen  286 LRKFLVLNPSKRGPCDQIMKD  306 (596)
T ss_pred             HHHhhccCccccCCHHHhhhh
Confidence            999999999999999999863

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=98.21  E-value=4.4e-07  Score=65.27  Aligned_cols=36  Identities=22%  Similarity=0.196  Sum_probs=32.8

Q ss_pred             CCcccccCCcccccchhhHHHHHHHHHhCCCCCCCC
Q 032213            2 SPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVN   37 (145)
Q Consensus         2 aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~   37 (145)
                      |||.+.+..|....|+||+||.+||+-+|+.-|...
T Consensus       603 aPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~  638 (752)
T KOG0670|consen  603 APEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR  638 (752)
T ss_pred             CcceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence            799999999999999999999999999999877543

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=98.21  E-value=1.2e-06  Score=56.36  Aligned_cols=37  Identities=38%  Similarity=0.556  Sum_probs=31.9

Q ss_pred             CCCcccc----cCCcccccchhhHHHHHHHHHhCCCCCCCC
Q 032213            1 MSPEWQN----SGLITVKSDVYSFGVVLLEIVCCRSNFEVN   37 (145)
Q Consensus         1 ~aPe~~~----~~~~~~~~dv~s~g~v~~el~~g~~~~~~~   37 (145)
                      ||||.+.    ...|+.++||||+|+.++|+.+++.||...
T Consensus       215 maPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w  255 (282)
T KOG0984|consen  215 MAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW  255 (282)
T ss_pred             CChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence            7899886    235889999999999999999999998754

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=98.19  E-value=3.9e-07  Score=68.32  Aligned_cols=84  Identities=21%  Similarity=0.215  Sum_probs=55.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhC-CCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCC-RSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||.+....-+.++|++++|||++.+++| ..||-..  ...+..+....         ..++.  +....++  ...+
T Consensus       681 ~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~--~~R~~NIl~~~---------~~L~~--L~~~~d~--eA~d  745 (903)
T KOG1027|consen  681 QAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDS--LERQANILTGN---------YTLVH--LEPLPDC--EAKD  745 (903)
T ss_pred             cCHHHHhccccCcccchhhcCceEEEEecCCccCCCch--HHhhhhhhcCc---------cceee--eccCchH--HHHH
Confidence            589999988888899999999999988877 4565422  11111111000         00000  0111111  6789


Q ss_pred             HHHhcccCCCCCCCCHHHHH
Q 032213           80 VRLLCIQDEPNLRPSMKNVI   99 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~   99 (145)
                      |+.+++..+|..||++.+|+
T Consensus       746 LI~~ml~~dP~~RPsa~~VL  765 (903)
T KOG1027|consen  746 LISRMLNPDPQLRPSATDVL  765 (903)
T ss_pred             HHHHhcCCCcccCCCHHHHh
Confidence            99999999999999999997

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=98.16  E-value=2.1e-06  Score=61.04  Aligned_cols=89  Identities=19%  Similarity=0.156  Sum_probs=55.9

Q ss_pred             CCCcccccC----CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHH
Q 032213            1 MSPEWQNSG----LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLET   76 (145)
Q Consensus         1 ~aPe~~~~~----~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (145)
                      ++||++.-+    +.+.+.||||+||+++.-++|+.||-..   ..+..+.+...-+. ....  -+    +.-+....+
T Consensus       647 LPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhn---qsQQdILqeNTIlk-AtEV--qF----P~KPvVsse  716 (775)
T KOG1151|consen  647 LPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHN---QSQQDILQENTILK-ATEV--QF----PPKPVVSSE  716 (775)
T ss_pred             cCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCc---hhHHHHHhhhchhc-ceec--cC----CCCCccCHH
Confidence            467766522    4788999999999999999999998532   22223322111000 0000  01    112233556


Q ss_pred             HHHHHHhcccCCCCCCCCHHHHH
Q 032213           77 MVRVRLLCIQDEPNLRPSMKNVI   99 (145)
Q Consensus        77 ~~~l~~~cl~~~p~~Rpt~~~v~   99 (145)
                      ..+++.+||+..-.+|...-++.
T Consensus       717 AkaFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  717 AKAFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             HHHHHHHHHHhhhhhhhhHHHHc
Confidence            78999999999989888776664

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=98.16  E-value=2.1e-06  Score=61.53  Aligned_cols=79  Identities=24%  Similarity=0.324  Sum_probs=50.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchh-hcHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEE-VDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   78 (145)
                      |+||.+.+..|+.++|+|++|++++|++. ....+.-       ..            .+.++-+..++ ......+.-.
T Consensus       429 msPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er-------~~------------t~~d~r~g~ip~~~~~d~p~e~  489 (516)
T KOG1033|consen  429 MSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER-------IA------------TLTDIRDGIIPPEFLQDYPEEY  489 (516)
T ss_pred             CCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH-------HH------------hhhhhhcCCCChHHhhcCcHHH
Confidence            78999999999999999999999999986 2222110       00            00011111111 1111222346


Q ss_pred             HHHHhcccCCCCCCCCHHHH
Q 032213           79 RVRLLCIQDEPNLRPSMKNV   98 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v   98 (145)
                      .|++..+.+.|..||++.++
T Consensus       490 ~ll~~lls~~p~~RP~~~~~  509 (516)
T KOG1033|consen  490 TLLQQLLSPSPEERPSAIEV  509 (516)
T ss_pred             HHHHHhcCCCcccCchHHHH
Confidence            88999999999999955443

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.10  E-value=1.3e-06  Score=64.40  Aligned_cols=52  Identities=21%  Similarity=0.288  Sum_probs=44.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYN   52 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~   52 (145)
                      ||||++....++...|.|+.||+++||+.|+.||....+...+...+.|-..
T Consensus       838 iapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~  889 (1034)
T KOG0608|consen  838 IAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNF  889 (1034)
T ss_pred             cChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhc
Confidence            6899998888899999999999999999999999887677777777666443

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.08  E-value=3.7e-06  Score=56.28  Aligned_cols=99  Identities=13%  Similarity=0.153  Sum_probs=58.4

Q ss_pred             CCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHh--------hhhhCcch-----
Q 032213            2 SPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKEL--------NKLVGEDE-----   67 (145)
Q Consensus         2 aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~-----   67 (145)
                      |||.+.+. .|+.+.||||.||++.|++-++.-|... .+..+..++.........+.+        ..++....     
T Consensus       225 APEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq-~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~  303 (449)
T KOG0664|consen  225 APELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAA-GPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDT  303 (449)
T ss_pred             cHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhcc-ChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCc
Confidence            78888754 5899999999999999999877777665 333333333221111100100        11111111     


Q ss_pred             ------hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 032213           68 ------EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        68 ------~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                            ..+.....+...+....+..+|++|.+..+.+..
T Consensus       304 ~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~  343 (449)
T KOG0664|consen  304 QRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH  343 (449)
T ss_pred             cceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence                  1222333445567777788899999988877653

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=98.07  E-value=5.2e-06  Score=56.49  Aligned_cols=35  Identities=23%  Similarity=0.359  Sum_probs=29.4

Q ss_pred             CCcccccC-CcccccchhhHHHHHHHHHhCCCCCCC
Q 032213            2 SPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEV   36 (145)
Q Consensus         2 aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~   36 (145)
                      |||.+.+. .|+.+.|+|+.||++.|+++-.+-|..
T Consensus       207 APELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g  242 (438)
T KOG0666|consen  207 APELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG  242 (438)
T ss_pred             ChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence            78888765 489999999999999999987766653

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=98.04  E-value=3.2e-05  Score=50.71  Aligned_cols=98  Identities=12%  Similarity=0.157  Sum_probs=61.1

Q ss_pred             Ccccc-cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHH------------HHhHhhhhhCcchhh
Q 032213            3 PEWQN-SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCF------------IAKELNKLVGEDEEV   69 (145)
Q Consensus         3 Pe~~~-~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~   69 (145)
                      ||.+. ...|.-.-|+|||||++.+|+..+.||....+..++...+..+....            -...+..+++.....
T Consensus       201 PELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk  280 (338)
T KOG0668|consen  201 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRK  280 (338)
T ss_pred             chheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccc
Confidence            55443 44577788999999999999999999876655555443332221110            001122222221100


Q ss_pred             cH----------HHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           70 DL----------RTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        70 ~~----------~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.          -...+..+|+.+.+.-|..+|+|+.|.+.
T Consensus       281 ~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~  321 (338)
T KOG0668|consen  281 PWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA  321 (338)
T ss_pred             cHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence            10          11356789999999999999999999875

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.04  E-value=1.3e-05  Score=58.64  Aligned_cols=82  Identities=15%  Similarity=0.007  Sum_probs=45.2

Q ss_pred             ccchhhHHHHHHHHHhCCC-CCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcch--hhcHHHHHHHHHHHHhcccCCC-
Q 032213           14 KSDVYSFGVVLLEIVCCRS-NFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDE--EVDLRTLETMVRVRLLCIQDEP-   89 (145)
Q Consensus        14 ~~dv~s~g~v~~el~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~cl~~~p-   89 (145)
                      +.|+||+||++++|+++.. |+...................     +........  ...........+|+.+++..++ 
T Consensus       412 ~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~-----~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~  486 (507)
T PLN03224        412 LFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNR-----WRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQ  486 (507)
T ss_pred             ccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHH-----HHhhcccCCCcccccccChHHHHHHHHHhccCCC
Confidence            4699999999999999865 443210000000000000000     111111111  1122335668899999999766 


Q ss_pred             --CCCCCHHHHHH
Q 032213           90 --NLRPSMKNVIL  100 (145)
Q Consensus        90 --~~Rpt~~~v~~  100 (145)
                        .+|+++.+++.
T Consensus       487 ~~~~RlSa~eaL~  499 (507)
T PLN03224        487 ANRGRLSVGQALS  499 (507)
T ss_pred             CcccCCCHHHHhC
Confidence              68999999975

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.92  E-value=3.5e-06  Score=62.72  Aligned_cols=99  Identities=11%  Similarity=0.146  Sum_probs=62.5

Q ss_pred             CCCcccccCCccc-ccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITV-KSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~-~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..|.. ..|||+.|+++..|.+|+.|+..-..........      .... ...+....-......+...+.
T Consensus       491 ~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~lp~~~~~  563 (601)
T KOG0590|consen  491 LAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTN------NYSD-QRNIFEGPNRLLSLLPRETRI  563 (601)
T ss_pred             cCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhh------cccc-ccccccChHHHHHhchhhHHH
Confidence            5899998888764 5899999999999999988876431111110000      0000 000111111122234556788


Q ss_pred             HHHhcccCCCCCCCCHHHHHH--HhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVIL--MLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~--~L~~~~  106 (145)
                      ++.++++.+|.+|.|+.++++  ++.++.
T Consensus       564 ~~~~~l~~~P~~R~ti~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  564 IIYRMLQLDPTKRITIEQILNDEWIRSIE  592 (601)
T ss_pred             HHHHHccCChhheecHHHHhhChHhhhcc
Confidence            999999999999999999986  455443

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=97.90  E-value=2.1e-05  Score=61.40  Aligned_cols=82  Identities=18%  Similarity=0.270  Sum_probs=51.8

Q ss_pred             CCCcccc----c-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCc--chhhc--H
Q 032213            1 MSPEWQN----S-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGE--DEEVD--L   71 (145)
Q Consensus         1 ~aPe~~~----~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~   71 (145)
                      ++||++.    + +.|....|.||+||++|||++|..||+..       .++         .-+..++..  ....|  .
T Consensus       243 ISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad-------slv---------eTY~KIm~hk~~l~FP~~~  306 (1317)
T KOG0612|consen  243 ISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD-------SLV---------ETYGKIMNHKESLSFPDET  306 (1317)
T ss_pred             cCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH-------HHH---------HHHHHHhchhhhcCCCccc
Confidence            4677775    3 56899999999999999999999999843       111         011112211  11222  3


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCC---HHHHH
Q 032213           72 RTLETMVRVRLLCIQDEPNLRPS---MKNVI   99 (145)
Q Consensus        72 ~~~~~~~~l~~~cl~~~p~~Rpt---~~~v~   99 (145)
                      ..+.+..+|+.+.+.. |+.|--   +.++-
T Consensus       307 ~VSeeakdLI~~ll~~-~e~RLgrngiedik  336 (1317)
T KOG0612|consen  307 DVSEEAKDLIEALLCD-REVRLGRNGIEDIK  336 (1317)
T ss_pred             ccCHHHHHHHHHHhcC-hhhhcccccHHHHH
Confidence            3566777888777654 556655   55553

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=97.79  E-value=9e-06  Score=60.19  Aligned_cols=89  Identities=13%  Similarity=0.183  Sum_probs=59.6

Q ss_pred             CCCcccc---cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHH
Q 032213            1 MSPEWQN---SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~---~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (145)
                      ||||+..   .+.|....|+|+.|+..+|+....+|.....+.+....+.        ...+   -.+.+.-+..-...+
T Consensus       179 mapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmT--------kS~~---qpp~lkDk~kws~~f  247 (829)
T KOG0576|consen  179 MAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMT--------KSGF---QPPTLKDKTKWSEFF  247 (829)
T ss_pred             cchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhh--------ccCC---CCCcccCCccchHHH
Confidence            7888774   4568899999999999999987777765442322221111        0111   111222223336678


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHH
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+|+..|+..+|++||++..++.
T Consensus       248 h~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  248 HNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             HHHHHHHhcCCCccCCChhhhee
Confidence            99999999999999999987764

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=97.77  E-value=5.1e-05  Score=48.01  Aligned_cols=99  Identities=11%  Similarity=0.071  Sum_probs=57.4

Q ss_pred             CCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhh---hCcch----------
Q 032213            2 SPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKL---VGEDE----------   67 (145)
Q Consensus         2 aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----------   67 (145)
                      +|.++.+. -|+...|+||.||++.|+.....|..+.....++...+-+.........+..+   .+-++          
T Consensus       169 ppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattsw  248 (292)
T KOG0662|consen  169 PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSW  248 (292)
T ss_pred             CcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchH
Confidence            35555544 37889999999999999987777766543333333333222221111222111   11110          


Q ss_pred             -hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 -EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 -~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                       ..-+.....-++++...+.-+|.+|.++...++
T Consensus       249 sqivp~lns~grdllqkll~cnp~qrisaeaalq  282 (292)
T KOG0662|consen  249 SQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ  282 (292)
T ss_pred             HHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence             111223445578888888899999999987654

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=97.72  E-value=2.6e-05  Score=54.59  Aligned_cols=35  Identities=31%  Similarity=0.369  Sum_probs=28.8

Q ss_pred             CCcccc-cCCcccccchhhHHHHHHHHHhCCCCCCC
Q 032213            2 SPEWQN-SGLITVKSDVYSFGVVLLEIVCCRSNFEV   36 (145)
Q Consensus         2 aPe~~~-~~~~~~~~dv~s~g~v~~el~~g~~~~~~   36 (145)
                      |||++. ...-+.++|+||.||+++.++++..||..
T Consensus       245 aPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~  280 (418)
T KOG1167|consen  245 APEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFK  280 (418)
T ss_pred             chHHHhhccCcCCccceeeccceeehhhcccccccc
Confidence            688775 44557889999999999999999988753

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=97.67  E-value=3.7e-05  Score=49.77  Aligned_cols=36  Identities=25%  Similarity=0.388  Sum_probs=29.7

Q ss_pred             CCCccc-ccCCcccccchhhHHHHHHHHHhCCCCCCC
Q 032213            1 MSPEWQ-NSGLITVKSDVYSFGVVLLEIVCCRSNFEV   36 (145)
Q Consensus         1 ~aPe~~-~~~~~~~~~dv~s~g~v~~el~~g~~~~~~   36 (145)
                      ++||.. ....++.++|+|+||++++++++|+.||..
T Consensus       166 ~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      166 LAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             CCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            457766 455667799999999999999999999864

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=97.64  E-value=3.4e-05  Score=57.39  Aligned_cols=40  Identities=28%  Similarity=0.320  Sum_probs=34.0

Q ss_pred             CCCcccc-cCCcccccchhhHHHHHHHHHhCCCCCCCCCCc
Q 032213            1 MSPEWQN-SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVST   40 (145)
Q Consensus         1 ~aPe~~~-~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~   40 (145)
                      ++||.+. .+.|+...|.||||+++|+..||..||.++..+
T Consensus       190 LhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p  230 (732)
T KOG4250|consen  190 LHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGP  230 (732)
T ss_pred             cChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCc
Confidence            3677776 478999999999999999999999999877444

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=97.53  E-value=8e-05  Score=54.74  Aligned_cols=34  Identities=29%  Similarity=0.353  Sum_probs=29.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCC
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEV   36 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~   36 (145)
                      ||||+++  .+....|.|+||++.+|+++|..|+..
T Consensus       160 mApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~  193 (612)
T KOG0603|consen  160 RAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG  193 (612)
T ss_pred             hhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence            6889887  456788999999999999999999864

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=97.48  E-value=0.00022  Score=56.10  Aligned_cols=77  Identities=21%  Similarity=0.235  Sum_probs=46.6

Q ss_pred             cccccchhhHHHHHHHHHhC-CCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHHHHhcccCCC
Q 032213           11 ITVKSDVYSFGVVLLEIVCC-RSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRVRLLCIQDEP   89 (145)
Q Consensus        11 ~~~~~dv~s~g~v~~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   89 (145)
                      .+.+=||||.|||+.|+++- +++|...    ....+.... .......+..+-          ...+++|++.+++.+|
T Consensus       215 L~paMDIFS~GCViaELf~Eg~PlF~LS----QL~aYr~~~-~~~~e~~Le~Ie----------d~~~Rnlil~Mi~rdP  279 (1431)
T KOG1240|consen  215 LTPAMDIFSAGCVIAELFLEGRPLFTLS----QLLAYRSGN-ADDPEQLLEKIE----------DVSLRNLILSMIQRDP  279 (1431)
T ss_pred             cChhhhhhhhhHHHHHHHhcCCCcccHH----HHHhHhccC-ccCHHHHHHhCc----------CccHHHHHHHHHccCc
Confidence            45678999999999999765 5454311    110110000 000001111111          1147899999999999


Q ss_pred             CCCCCHHHHHHHh
Q 032213           90 NLRPSMKNVILML  102 (145)
Q Consensus        90 ~~Rpt~~~v~~~L  102 (145)
                      .+|-++.+.++.-
T Consensus       280 s~RlSAedyL~~y  292 (1431)
T KOG1240|consen  280 SKRLSAEDYLQKY  292 (1431)
T ss_pred             hhccCHHHHHHhh
Confidence            9999999998763

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=97.36  E-value=5.2e-06  Score=60.23  Aligned_cols=85  Identities=12%  Similarity=0.032  Sum_probs=54.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||+++.+.|+..-|+||.|+++|.-++|..||....+   ....++.+..-....           -..+.....++|
T Consensus       733 LaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd---IndQIQNAaFMyPp~-----------PW~eis~~Aidl  798 (888)
T KOG4236|consen  733 LAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED---INDQIQNAAFMYPPN-----------PWSEISPEAIDL  798 (888)
T ss_pred             cCHHHHhhccccccccceeeeEEEEEEecccccCCCccc---hhHHhhccccccCCC-----------chhhcCHHHHHH
Confidence            589999999999999999999999999999999985422   222221111000011           112234445677


Q ss_pred             HHhcccCCCCCCCCHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVI   99 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~   99 (145)
                      +...++.+-.+|-+....+
T Consensus       799 In~LLqVkm~kRysvdk~l  817 (888)
T KOG4236|consen  799 INNLLQVKMRKRYSVDKSL  817 (888)
T ss_pred             HHHHHHHHHHHhcchHhhc
Confidence            7777777666666655443

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=97.32  E-value=0.00023  Score=50.38  Aligned_cols=88  Identities=22%  Similarity=0.262  Sum_probs=55.6

Q ss_pred             CCCccccc--CC----cccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHH
Q 032213            1 MSPEWQNS--GL----ITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTL   74 (145)
Q Consensus         1 ~aPe~~~~--~~----~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (145)
                      ||||+...  +.    .-.++|.|+.|.+.||++...-||+..    ....+....   .....+       +..+..++
T Consensus       418 mAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~r----Gem~L~~r~---Yqe~qL-------Palp~~vp  483 (598)
T KOG4158|consen  418 MAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKR----GEMLLDTRT---YQESQL-------PALPSRVP  483 (598)
T ss_pred             cchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCccccc----chheechhh---hhhhhC-------CCCcccCC
Confidence            68887752  22    126899999999999999888888742    111111111   111111       12344456


Q ss_pred             HHHHHHHHhcccCCCCCCCCHHHHHHHh
Q 032213           75 ETMVRVRLLCIQDEPNLRPSMKNVILML  102 (145)
Q Consensus        75 ~~~~~l~~~cl~~~p~~Rpt~~~v~~~L  102 (145)
                      ..+..++...++.||.+|++..-....|
T Consensus       484 p~~rqlV~~lL~r~pskRvsp~iAANvl  511 (598)
T KOG4158|consen  484 PVARQLVFDLLKRDPSKRVSPNIAANVL  511 (598)
T ss_pred             hHHHHHHHHHhcCCccccCCccHHHhHH
Confidence            6688899999999999999865444333

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=97.13  E-value=0.00057  Score=46.57  Aligned_cols=63  Identities=21%  Similarity=0.285  Sum_probs=40.5

Q ss_pred             CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHHHHhcccCCC
Q 032213           10 LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRVRLLCIQDEP   89 (145)
Q Consensus        10 ~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   89 (145)
                      .++.+.|.|.+|+++|.++++..|+....+......               ..-    .+. +.+..+..|+.+.++.+|
T Consensus       226 ~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~---------------~f~----~C~-~~Pe~v~~LI~~lL~~~~  285 (288)
T PF14531_consen  226 PYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW---------------DFS----RCR-DMPEPVQFLIRGLLQRNP  285 (288)
T ss_dssp             EE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG---------------GGT----TSS----HHHHHHHHHHT-SSG
T ss_pred             eeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc---------------cch----hcC-CcCHHHHHHHHHHccCCc
Confidence            467889999999999999999999864411111100               011    233 557778999999999999


Q ss_pred             CCC
Q 032213           90 NLR   92 (145)
Q Consensus        90 ~~R   92 (145)
                      .+|
T Consensus       286 ~~R  288 (288)
T PF14531_consen  286 EDR  288 (288)
T ss_dssp             GGS
T ss_pred             ccC
Confidence            887

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=96.66  E-value=0.0011  Score=52.07  Aligned_cols=80  Identities=16%  Similarity=0.123  Sum_probs=50.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +||||+.-..|..-+|.|++|++++|.+.|+.||....+. +   +......    ..+  ..+   +.......+..++
T Consensus       225 iaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpe-e---lfg~vis----d~i--~wp---E~dea~p~Ea~dl  291 (1205)
T KOG0606|consen  225 IAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE-E---LFGQVIS----DDI--EWP---EEDEALPPEAQDL  291 (1205)
T ss_pred             cChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHH-H---HHhhhhh----hhc--ccc---ccCcCCCHHHHHH
Confidence            4788888777888999999999999999999998754111 1   1111000    000  000   1122234457778


Q ss_pred             HHhcccCCCCCCC
Q 032213           81 RLLCIQDEPNLRP   93 (145)
Q Consensus        81 ~~~cl~~~p~~Rp   93 (145)
                      +...++.+|..|-
T Consensus       292 i~~LL~qnp~~Rl  304 (1205)
T KOG0606|consen  292 IEQLLRQNPLCRL  304 (1205)
T ss_pred             HHHHHHhChHhhc
Confidence            8888888887775

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=96.35  E-value=0.0014  Score=44.24  Aligned_cols=79  Identities=10%  Similarity=0.121  Sum_probs=43.6

Q ss_pred             cccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHHHHhcccCCCC
Q 032213           11 ITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRVRLLCIQDEPN   90 (145)
Q Consensus        11 ~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   90 (145)
                      ....+|+|.|||+++..++|+.|++.-  ......+..|..  +..+....+.+    .-.........+-.+-+..++.
T Consensus       202 ~~ps~D~WqfGIi~f~cltG~~PWQka--~~~d~~Y~~~~~--w~~rk~~~~P~----~F~~fs~~a~r~Fkk~lt~~~~  273 (378)
T KOG1345|consen  202 VNPSTDIWQFGIIFFYCLTGKFPWQKA--SIMDKPYWEWEQ--WLKRKNPALPK----KFNPFSEKALRLFKKSLTPRFK  273 (378)
T ss_pred             ecccccchheeeeeeeeecCCCcchhh--hccCchHHHHHH--HhcccCccCch----hhcccCHHHHHHHHHhcCCccc
Confidence            457799999999999999999998732  222222223221  11111110000    0001133456667778888888


Q ss_pred             CCCCHHH
Q 032213           91 LRPSMKN   97 (145)
Q Consensus        91 ~Rpt~~~   97 (145)
                      +|=.+.+
T Consensus       274 drcki~~  280 (378)
T KOG1345|consen  274 DRCKIWT  280 (378)
T ss_pred             ccchhHH
Confidence            8833333

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=96.03  E-value=0.0075  Score=42.00  Aligned_cols=81  Identities=25%  Similarity=0.322  Sum_probs=45.0

Q ss_pred             CCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHHH
Q 032213            2 SPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRVR   81 (145)
Q Consensus         2 aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   81 (145)
                      +|++......+..+|||+||+..+|+..+..-.-...+...-..-+.        +.   ++.-  .     ...-+.++
T Consensus       250 a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia--------~~---i~~l--e-----n~lqr~~i  311 (458)
T KOG1266|consen  250 APESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIA--------NV---IIGL--E-----NGLQRGSI  311 (458)
T ss_pred             cCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhh--------hh---eeec--c-----CccccCcC
Confidence            34554444566789999999999998776543111101111100000        00   0000  0     01124566


Q ss_pred             HhcccCCCCCCCCHHHHHH
Q 032213           82 LLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        82 ~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ..|++..|..||++.+++.
T Consensus       312 ~kcl~~eP~~rp~ar~llf  330 (458)
T KOG1266|consen  312 TKCLEGEPNGRPDARLLLF  330 (458)
T ss_pred             cccccCCCCCCcchhhhhc
Confidence            7799999999999998764

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=95.61  E-value=0.045  Score=36.89  Aligned_cols=98  Identities=15%  Similarity=0.152  Sum_probs=56.3

Q ss_pred             CCCccccc---CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHH
Q 032213            1 MSPEWQNS---GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~~---~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (145)
                      ++||.+.+   ..+....|+|++|+++++++.|..|+...................... ........  .........+
T Consensus       175 ~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~  251 (384)
T COG0515         175 MAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP-SLASPLSP--SNPELISKAA  251 (384)
T ss_pred             CCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc-ccccccCc--cccchhhHHH
Confidence            46887776   577889999999999999999998855431100011111110000000 00000000  0001123567


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHHH
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      .+++..|+..+|..|.+.......
T Consensus       252 ~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         252 SDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             HHHHHHHHhcCchhcCCHHHHhhc
Confidence            889999999999999998876653

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=94.83  E-value=0.025  Score=44.92  Aligned_cols=80  Identities=19%  Similarity=0.194  Sum_probs=55.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcc---hhhcHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGED---EEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~   77 (145)
                      ++||.+.+.......|.|++|++++|.++|..|+.........                ..+....   +..+.......
T Consensus      1002 laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f----------------~ni~~~~~~~p~g~~~~s~~a 1065 (1205)
T KOG0606|consen 1002 LAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIF----------------ENILNRDIPWPEGPEEGSYEA 1065 (1205)
T ss_pred             cCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhh----------------hccccCCCCCCCCccccChhh
Confidence            3688888888888999999999999999999998754111111                1111111   12334445567


Q ss_pred             HHHHHhcccCCCCCCCCHH
Q 032213           78 VRVRLLCIQDEPNLRPSMK   96 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~   96 (145)
                      ..++.+.+..++.+|-.+.
T Consensus      1066 q~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1066 QDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             hhhhhhhhccCchhccCcc
Confidence            7888888888888887665

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=93.84  E-value=0.12  Score=38.66  Aligned_cols=81  Identities=22%  Similarity=0.187  Sum_probs=41.5

Q ss_pred             cccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHHHHhcccCCCCCC
Q 032213           13 VKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLR   92 (145)
Q Consensus        13 ~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R   92 (145)
                      .++|||++|.++.++..|..-.... ...+....+.........  ...+... ......+...+..+...|+...|..|
T Consensus       110 pKsdVwsl~~i~~el~L~~~l~~~~-~~s~~l~~i~k~~~~d~~--~~~~a~e-~~~~~~~d~~~~~~~~~c~~~~~~ir  185 (725)
T KOG1093|consen  110 PKSDVWSLGFIILELYLGISLEAEL-TESEYLEILLKYYTDDQE--LLSTAME-HLIQLLADKKRLPLLKKCLWLEPIIR  185 (725)
T ss_pred             cchhhhhHHHHHHHHHHhhHHHHHH-HHHHHHHHHHHhccCchh--HHHHHHH-HHHHHhhhHhHHHHhccCCccccccc
Confidence            6899999999999987776433211 011111111000000000  0000000 02233456667888899999888877


Q ss_pred             CCHHH
Q 032213           93 PSMKN   97 (145)
Q Consensus        93 pt~~~   97 (145)
                      |...+
T Consensus       186 ~l~~~  190 (725)
T KOG1093|consen  186 PLPME  190 (725)
T ss_pred             cchhH
Confidence            65443

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=91.70  E-value=0.019  Score=43.41  Aligned_cols=86  Identities=17%  Similarity=0.204  Sum_probs=52.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCC-CCCCCchhhHhHHHHHHHHHHHhHhhhhhCc-chhhcHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNF-EVNVSTADVVLLSTWVYNCFIAKELNKLVGE-DEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   78 (145)
                      .|||++.+...+.++|+||+|++++-+..|..+. ... .......+...            ..+. ........+.++.
T Consensus       176 ~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~-~~~~~~~~~~~------------~~~~~~~~~s~~~p~el~  242 (700)
T KOG2137|consen  176 LAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAAN-GGLLSYSFSRN------------LLNAGAFGYSNNLPSELR  242 (700)
T ss_pred             ccchhhccccccccccceeeeeEEEEEecCCcchhhcc-CCcchhhhhhc------------ccccccccccccCcHHHH
Confidence            4799998888889999999999988777444332 221 11111111000            0000 0012234456678


Q ss_pred             HHHHhcccCCCCCCCCHHHHH
Q 032213           79 RVRLLCIQDEPNLRPSMKNVI   99 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~   99 (145)
                      +-+.+.+..+...||++..+.
T Consensus       243 ~~l~k~l~~~~~~rp~~~~l~  263 (700)
T KOG2137|consen  243 ESLKKLLNGDSAVRPTLDLLL  263 (700)
T ss_pred             HHHHHHhcCCcccCcchhhhh
Confidence            888889999999999766554

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=82.99  E-value=0.13  Score=39.12  Aligned_cols=89  Identities=17%  Similarity=0.160  Sum_probs=52.8

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||...+ +......|+|+.|+++..+++|..|.......  ...+..|....         .................
T Consensus       196 ~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~--~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~  264 (601)
T KOG0590|consen  196 GAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRK--DGRYSSWKSNK---------GRFTQLPWNSISDQAHD  264 (601)
T ss_pred             CCcccccchhhcCCCcccccccccccccccCCCCccccccc--cccceeecccc---------cccccCccccCChhhhh
Confidence            46777765 34456789999999999999999886533111  11111111100         00001111222444677


Q ss_pred             HHHhcccCCCCCCCCHHHHHH
Q 032213           80 VRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +..+++..+|..|.+..++..
T Consensus       265 ~l~k~l~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  265 LLHKILKENPSNRLSIEELKL  285 (601)
T ss_pred             cccccccCCchhccccccccc
Confidence            777888889999999887754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	145
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		2e-12
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		2e-12
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		1e-07
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		1e-07
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-05
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		2e-05
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-05
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		3e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEV-NVSTADVVLLSTWVYNCFIAKEL 59
           ++PE+ ++G  + K+DV+ +GV+LLE++  +  F++  ++  D V+L  WV      K+L
Sbjct: 210 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 269
Query: 60  NKLVGEDEEVDLRT--LETMVRVRLLCIQDEPNLRPSMKNVILMLEG 104
             LV  D + + +   +E +++V LLC Q  P  RP M  V+ MLEG
Sbjct: 270 EALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEV-NVSTADVVLLSTWVYNCFIAKEL 59
           ++PE+ ++G  + K+DV+ +GV+LLE++  +  F++  ++  D V+L  WV      K+L
Sbjct: 202 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 261
Query: 60  NKLVGEDEEVDLRT--LETMVRVRLLCIQDEPNLRPSMKNVILMLEG 104
             LV  D + + +   +E +++V LLC Q  P  RP M  V+ MLEG
Sbjct: 262 EALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           + PE+   G +T KSDVYSFGVVL E++C RS   V     ++V L+ W        +L 
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI-VQSLPREMVNLAEWAVESHNNGQLE 266
Query: 61  KLVGED--EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEI 108
           ++V  +  +++   +L       + C+      RPSM +V+  LE  + +
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           + PE+   G +T KSDVYSFGVVL E++C RS   V     ++V L+ W        +L 
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI-VQSLPREMVNLAEWAVESHNNGQLE 266
Query: 61  KLVGED--EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEI 108
           ++V  +  +++   +L       + C+      RPSM +V+  LE  + +
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVN------VSTADVVLLSTWVYNCF 54
           M+PE    G IT KSD+YSFGVVLLEI+      + +      +   + +         +
Sbjct: 202 MAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDY 260
Query: 55  IAKELNKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
           I K++N       + D  ++E M  V   C+ ++ N RP +K V  +L+
Sbjct: 261 IDKKMN-------DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVN------VSTADVVLLSTWVYNCF 54
           M+PE    G IT KSD+YSFGVVLLEI+      + +      +   + +         +
Sbjct: 202 MAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDY 260
Query: 55  IAKELNKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
           I K++N       + D  ++E M  V   C+ ++ N RP +K V  +L+
Sbjct: 261 IDKKMN-------DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVN------VSTADVVLLSTWVYNCF 54
           M+PE    G IT KSD+YSFGVVLLEI+      + +      +   + +         +
Sbjct: 196 MAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDY 254
Query: 55  IAKELNKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
           I K++N       + D  ++E M  V   C+ ++ N RP +K V  +L+
Sbjct: 255 IDKKMN-------DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Query: 9   GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEE 68
           G IT KSD+YSFGVVLLEI+      + +     ++L              + +  +  +
Sbjct: 200 GEITPKSDIYSFGVVLLEIITGLPAVDEH-REPQLLLDIKEEIEDEEKTIEDYIDKKXND 258
Query: 69  VDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
            D  ++E    V   C+ ++ N RP +K V  +L+
Sbjct: 259 ADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	145
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	2e-28
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	5e-25
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-22
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-13
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-10
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	6e-10
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-09
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	4e-09
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-08
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-08
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-08
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	5e-08
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	7e-08
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-07
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-05
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-05
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-05
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-05
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-05
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-05
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	3e-05
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	3e-05
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	3e-05
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-05
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	3e-05
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	3e-05
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	4e-05
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	4e-05
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	4e-05
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	4e-05
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	4e-05
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	5e-05
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	5e-05
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	5e-05
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	6e-05
3pls_A	298	Macrophage-stimulating protein receptor; protein k	6e-05
4aoj_A	329	High affinity nerve growth factor receptor; transf	6e-05
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	6e-05
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	6e-05
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	7e-05
3q4u_A	301	Activin receptor type-1; structural genomics conso	9e-05
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	1e-04
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	1e-04
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-04
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	1e-04
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	1e-04
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-04
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-04
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-04
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-04
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-04
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	3e-04
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	3e-04
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	3e-04
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	3e-04
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	3e-04
3ork_A	311	Serine/threonine protein kinase; structural genomi	4e-04
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	4e-04
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	4e-04
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	4e-04
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	4e-04
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	4e-04
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	5e-04
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	6e-04
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	7e-04
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	8e-04
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	8e-04
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	9e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  105 bits (265), Expect = 2e-28
 Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 3/107 (2%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVN-VSTADVVLLSTWVYNCFIAKEL 59
           ++PE+ ++G  + K+DV+ +GV+LLE++  +  F++  ++  D V+L  WV      K+L
Sbjct: 202 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 261

Query: 60  NKLVGED--EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEG 104
             LV  D         +E +++V LLC Q  P  RP M  V+ MLEG
Sbjct: 262 EALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 96.1 bits (240), Expect = 5e-25
 Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 7/112 (6%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           + PE+   G +T KSDVYSFGVVL E++C RS    ++    V L   W        +L 
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLA-EWAVESHNNGQLE 266

Query: 61  KLVGED----EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEI 108
           ++V  D    +++   +L       + C+      RPSM +V+  LE  + +
Sbjct: 267 QIV--DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 89.1 bits (222), Expect = 2e-22
 Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 10/108 (9%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFI-AKEL 59
           M+PE    G IT KSD+YSFGVVLLEI+      +      +  LL           K +
Sbjct: 202 MAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVD---EHREPQLLLDIKEEIEDEEKTI 257

Query: 60  NKLVGED---EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEG 104
              +  D    + D  ++E M  V   C+ ++ N RP +K V  +L+ 
Sbjct: 258 EDYI--DKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 64.7 bits (158), Expect = 2e-13
 Identities = 16/116 (13%), Positives = 37/116 (31%), Gaps = 14/116 (12%)

Query: 1   MSPE-----WQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFI 55
           M+PE             ++ D+Y+ G+VL E+    +  +  V    ++     +     
Sbjct: 200 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVD-EYMLPFEEEIGQHPS 258

Query: 56  AKELNKLVGE--------DEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
            +++ ++V          D       +  +      C   +   R S   V   + 
Sbjct: 259 LEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERIT 314

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 55.8 bits (135), Expect = 3e-10
 Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 13/106 (12%)

Query: 1   MSPE---WQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAK 57
           M+PE    Q+S   + +SDVY+FG+VL E++  +  +  N++  D ++            
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIE---------MV 238

Query: 58  ELNKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
               L  +  +V     + M R+   C++ + + RPS   ++  +E
Sbjct: 239 GRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 53.7 bits (129), Expect = 2e-09
 Identities = 18/141 (12%), Positives = 46/141 (32%), Gaps = 17/141 (12%)

Query: 1   MSPE-------WQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVL-LSTWVYN 52
           M+PE        ++      + D+Y+ G++  EI    ++     S  +  +   T V N
Sbjct: 195 MAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGN 254

Query: 53  CFIAKELNKLVGEDEE---------VDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
               +++  LV  +++          +   + ++      C   +   R + +     + 
Sbjct: 255 HPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMA 314

Query: 104 GTMEIPVVPFPILSNFSSNSQ 124
             M I      +      +  
Sbjct: 315 ELMMIWERNKSVSPTAHHHHH 335

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 52.7 bits (127), Expect = 4e-09
 Identities = 32/125 (25%), Positives = 47/125 (37%), Gaps = 27/125 (21%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           M+PE         KSDVYSFGV+L E+   +  +  N++ A VV                
Sbjct: 206 MAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWG-NLNPAQVVA--------------- 249

Query: 61  KLVGEDEEVDLR------TLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVPFP 114
             VG       R          +  +   C  +EP  RPS   ++ +L   +    VP P
Sbjct: 250 -AVGFK---CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLR-PLIKSAVPPP 304

Query: 115 ILSNF 119
             S+ 
Sbjct: 305 NRSDL 309

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 51.2 bits (123), Expect = 1e-08
 Identities = 24/132 (18%), Positives = 50/132 (37%), Gaps = 14/132 (10%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           M+PE       + K DV+S+G++L E++  R  F+  +          +     +     
Sbjct: 170 MAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD-EIGG------PAFRIMWAVHNGTR 222

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVPFPILSNFS 120
             + ++    + +L  M R    C   +P+ RPSM+ ++ ++   +            + 
Sbjct: 223 PPLIKNLPKPIESL--MTR----CWSKDPSQRPSMEEIVKIMT-HLMRYFPGADEPLQYP 275

Query: 121 SNSQTLDGTKGR 132
                  G  GR
Sbjct: 276 CQHSLPPGEDGR 287

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 50.8 bits (122), Expect = 2e-08
 Identities = 21/108 (19%), Positives = 37/108 (34%), Gaps = 20/108 (18%)

Query: 1   MSPE--WQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCF---I 55
           M+PE         T K+D YSF ++L  I+     F+   S   +  ++          I
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD-EYSYGKIKFINMIREEGLRPTI 251

Query: 56  AKELNKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
            ++            LR +  +      C   +P  RP    ++  L 
Sbjct: 252 PEDCPP--------RLRNV--IEL----CWSGDPKKRPHFSYIVKELS 285

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 50.0 bits (120), Expect = 3e-08
 Identities = 16/95 (16%), Positives = 33/95 (34%), Gaps = 20/95 (21%)

Query: 12  TVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDL 71
           +  SDV++ G +  E+      F+       ++    W             +G   + +L
Sbjct: 221 SKHSDVFALGTIWYELHAREWPFK-TQPAEAII----WQ------------MGTGMKPNL 263

Query: 72  RTLETMVRVRLL---CIQDEPNLRPSMKNVILMLE 103
             +     +  +   C   E   RP+   ++ MLE
Sbjct: 264 SQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLE 298

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 49.3 bits (118), Expect = 5e-08
 Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 15/104 (14%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFE-VNVSTADVVLLSTWVYNCFIAKEL 59
           M+PE  N      K DV+SFG+VL EI+   +        T D  L         +   L
Sbjct: 189 MAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN--------VRGFL 240

Query: 60  NKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
           ++    +       +   VR    C   +P  RPS   +   LE
Sbjct: 241 DRYCPPNCPPSFFPI--TVR----CCDLDPEKRPSFVKLEHWLE 278

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 48.8 bits (117), Expect = 7e-08
 Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 20/106 (18%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           M+PE   + + +  SDV+S+GV+L E++     F   +    V               +N
Sbjct: 181 MAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFR-GIDGLAVAY----------GVAMN 229

Query: 61  KL---VGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
           KL   +          L  M      C   +P+ RPS  N++  L 
Sbjct: 230 KLALPIPSTCPEPFAKL--MED----CWNPDPHSRPSFTNILDQLT 269

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 21/112 (18%), Positives = 45/112 (40%), Gaps = 29/112 (25%)

Query: 1   MSPE---WQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAK 57
           ++PE    +        +D++SF V+L E+V     F  ++S  ++ +         +A 
Sbjct: 175 VAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFA-DLSNMEIGMK--------VAL 225

Query: 58  ELNKLVGEDEEVDLR------TLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
           E            LR          + ++  +C+ ++P  RP    ++ +LE
Sbjct: 226 E-----------GLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILE 266

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 13/28 (46%), Positives = 19/28 (67%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
           M+PE     + T +SDV+SFGV++ EI 
Sbjct: 226 MAPEALFDRVYTHQSDVWSFGVLMWEIF 253

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 13/28 (46%), Positives = 20/28 (71%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
           M+PE     + TV+SDV+S+G++L EI 
Sbjct: 233 MAPESIFDCVYTVQSDVWSYGILLWEIF 260

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 42.0 bits (99), Expect = 2e-05
 Identities = 13/28 (46%), Positives = 19/28 (67%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
           M+PE     + T +SDV+SFGV++ EI 
Sbjct: 272 MAPEALFDRVYTHQSDVWSFGVLMWEIF 299

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 14/28 (50%), Positives = 19/28 (67%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
           M+ E     + T +SDV+SFGV+L EIV
Sbjct: 219 MAIESLFDHIYTTQSDVWSFGVLLWEIV 246

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 42.0 bits (99), Expect = 2e-05
 Identities = 14/28 (50%), Positives = 19/28 (67%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
           M+PE     + T +SDV+SFGV+L EI 
Sbjct: 260 MAPEALFDRIYTHQSDVWSFGVLLWEIF 287

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 7/43 (16%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV-------CCRSNFEV 36
           M PE       T +SDV+SFGV+L EI           SN EV
Sbjct: 202 MPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV 244

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 41.5 bits (98), Expect = 3e-05
 Identities = 11/28 (39%), Positives = 19/28 (67%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
           M+PE   + + T +SDV+S+G+ L E+ 
Sbjct: 214 MAPESIFNCVYTFESDVWSYGIFLWELF 241

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 41.5 bits (98), Expect = 3e-05
 Identities = 20/43 (46%), Positives = 23/43 (53%), Gaps = 7/43 (16%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV-------CCRSNFEV 36
           MSPE    G+ T  SDV+SFGVVL EI           SN +V
Sbjct: 207 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 249

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 7/43 (16%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV-------CCRSNFEV 36
           M+PE    G  ++ SD++S+GVVL E+        C  SN +V
Sbjct: 197 MAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV 239

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 41.1 bits (97), Expect = 3e-05
 Identities = 14/28 (50%), Positives = 20/28 (71%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
           M+PE     + T++SDV+SFGV+L EI 
Sbjct: 217 MAPETIFDRVYTIQSDVWSFGVLLWEIF 244

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 41.1 bits (97), Expect = 3e-05
 Identities = 14/28 (50%), Positives = 21/28 (75%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
           M+PE    G+ T+KSDV+S+G++L EI 
Sbjct: 241 MAPESLFEGIYTIKSDVWSYGILLWEIF 268

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 41.1 bits (96), Expect = 3e-05
 Identities = 14/28 (50%), Positives = 20/28 (71%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
           M+PE     + T++SDV+SFGV+L EI 
Sbjct: 262 MAPETIFDRVYTIQSDVWSFGVLLWEIF 289

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 41.2 bits (97), Expect = 4e-05
 Identities = 16/28 (57%), Positives = 22/28 (78%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
            +PE  N G  T+KSDV+SFG++L+EIV
Sbjct: 352 TAPEAINFGSFTIKSDVWSFGILLMEIV 379

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 41.1 bits (97), Expect = 4e-05
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 7/43 (16%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV-------CCRSNFEV 36
           ++ E     + T KSDV++FGV + EI            N E+
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM 258

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 41.0 bits (96), Expect = 4e-05
 Identities = 13/28 (46%), Positives = 19/28 (67%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
            +PE    G  T+KSDV+SFG++L E+ 
Sbjct: 431 TAPEAALYGRFTIKSDVWSFGILLTELT 458

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 41.2 bits (97), Expect = 4e-05
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
           ++ E     L TV SDV++FGV + EI+
Sbjct: 206 LALESLADNLYTVHSDVWAFGVTMWEIM 233

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 41.1 bits (97), Expect = 4e-05
 Identities = 14/28 (50%), Positives = 19/28 (67%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
           M+ E  N  + T  SDV+S+GV+L EIV
Sbjct: 208 MAIESLNYSVYTTNSDVWSYGVLLWEIV 235

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 40.8 bits (96), Expect = 5e-05
 Identities = 14/28 (50%), Positives = 18/28 (64%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
           M PE    G+ T K+D +SFGV+L EI 
Sbjct: 212 MPPEAFMEGIFTSKTDTWSFGVLLWEIF 239

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 40.8 bits (96), Expect = 5e-05
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 7/43 (16%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV-------CCRSNFEV 36
           M PE       T +SDV+++GVVL EI           ++ EV
Sbjct: 243 MPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV 285

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 40.8 bits (96), Expect = 5e-05
 Identities = 14/28 (50%), Positives = 18/28 (64%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
           M PE    G+ T K+D +SFGV+L EI 
Sbjct: 253 MPPEAFMEGIFTSKTDTWSFGVLLWEIF 280

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 40.5 bits (95), Expect = 6e-05
 Identities = 21/121 (17%), Positives = 39/121 (32%), Gaps = 24/121 (19%)

Query: 1   MSPE-WQNSGLITV-----KSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCF 54
           M+PE   +S  +       ++D+Y+ G+V  EI    S   ++      +     V +  
Sbjct: 218 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ--LPYYDLVPSDP 275

Query: 55  IAKELNKLVGED------------EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILML 102
             +E+ K+V E              E      + M      C       R +   +   L
Sbjct: 276 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRE----CWYANGAARLTALRIKKTL 331

Query: 103 E 103
            
Sbjct: 332 S 332

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 40.3 bits (95), Expect = 6e-05
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
            + E   +   T KSDV+SFGV+L E++
Sbjct: 195 TALESLQTYRFTTKSDVWSFGVLLWELL 222

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 40.4 bits (95), Expect = 6e-05
 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 7/43 (16%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV-------CCRSNFEV 36
           M PE       T +SDV+SFGVVL EI           SN E 
Sbjct: 227 MPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA 269

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 40.5 bits (95), Expect = 6e-05
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
            +PE       ++KSDV++FGV+L EI 
Sbjct: 386 TAPESLAYNKFSIKSDVWAFGVLLWEIA 413

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 40.5 bits (95), Expect = 7e-05
 Identities = 13/28 (46%), Positives = 19/28 (67%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
            +PE    G  T+KSDV+SFG++L E+ 
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELT 375

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 40.0 bits (94), Expect = 9e-05
 Identities = 20/117 (17%), Positives = 42/117 (35%), Gaps = 16/117 (13%)

Query: 1   MSPE------WQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCF 54
           M+PE        +      + D+++FG+VL E+     +  +             V N  
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK--PPFYDVVPNDP 241

Query: 55  IAKELNKLVGEDEE-----VDLRTLETMVRVRLL---CIQDEPNLRPSMKNVILMLE 103
             +++ K+V  D++         +  T+  +  L   C    P+ R +   +   L 
Sbjct: 242 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 298

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
            +PE  N G  + +SDV+SFG++L E  
Sbjct: 282 TAPEALNYGRYSSESDVWSFGILLWETF 309

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 16/28 (57%), Positives = 21/28 (75%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
            +PE  N G  T+KSDV+SFG++L EIV
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIV 204

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
            +PE       + KSDV+SFG++L EI 
Sbjct: 353 TAPEALREKKFSTKSDVWSFGILLWEIY 380

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 39.6 bits (93), Expect = 1e-04
 Identities = 13/28 (46%), Positives = 19/28 (67%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
           M+ E   +   T KSDV+SFGV+L E++
Sbjct: 199 MALESLQTQKFTTKSDVWSFGVLLWELM 226

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 39.7 bits (93), Expect = 1e-04
 Identities = 13/28 (46%), Positives = 19/28 (67%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
           M+ E   +   T KSDV+SFGV+L E++
Sbjct: 263 MALESLQTQKFTTKSDVWSFGVLLWELM 290

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 39.5 bits (92), Expect = 2e-04
 Identities = 8/35 (22%), Positives = 13/35 (37%), Gaps = 1/35 (2%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFE 35
            +PE       TV +D+Y+ G  L  +        
Sbjct: 244 QAPE-IVRTGPTVATDIYTVGRTLAALTLDLPTRN 277

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
            +PE       + KSDV+SFG++L EI 
Sbjct: 181 TAPEALREKKFSTKSDVWSFGILLWEIY 208

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 38.9 bits (91), Expect = 2e-04
 Identities = 20/121 (16%), Positives = 40/121 (33%), Gaps = 24/121 (19%)

Query: 1   MSPE------WQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCF 54
           M PE       +N     + +D+YSFG++L E+     +  +       +     V +  
Sbjct: 213 MPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQ--LPYHDLVPSDP 270

Query: 55  IAKELNKLVGED------------EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILML 102
             +++ ++V               +E   +  + M      C    P  R +   V   L
Sbjct: 271 SYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTE----CWAHNPASRLTALRVKKTL 326

Query: 103 E 103
            
Sbjct: 327 A 327

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 7/43 (16%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCC-------RSNFEV 36
             PE       + KSD+++FGV++ EI           +N E 
Sbjct: 188 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET 230

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 39.1 bits (91), Expect = 2e-04
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
           M+PE  N    T  SDV+ FGV + EI+
Sbjct: 559 MAPESINFRRFTSASDVWMFGVCMWEIL 586

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 38.4 bits (90), Expect = 3e-04
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
            +PE       ++KSDV++FGV+L EI 
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIA 206

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 38.4 bits (90), Expect = 3e-04
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
           M+PE  N    T  SDV+ FGV + EI+
Sbjct: 184 MAPESINFRRFTSASDVWMFGVCMWEIL 211

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 38.5 bits (90), Expect = 3e-04
 Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 18/112 (16%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV-CCRSNFEVNVSTADVVLLSTWVYNCFIAKEL 59
            +PE          SDV+SFGV L E++  C S+        +++ ++           L
Sbjct: 204 YAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIA---QGQMTVLRL 260

Query: 60  NKLVGEDEE--------VDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
            +L+   E          ++  L  M      C + E + RP+ +N+I +L+
Sbjct: 261 TELLERGERLPRPDKCPAEVYHL--M----KNCWETEASFRPTFENLIPILK 306

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 9/28 (32%), Positives = 18/28 (64%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
            +PE  +    + KSDV++FG+++ E+ 
Sbjct: 172 SAPEVFHYFKYSSKSDVWAFGILMWEVF 199

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 13/28 (46%), Positives = 16/28 (57%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
           MSPE  N    T  SDV+ F V + EI+
Sbjct: 181 MSPESINFRRFTTASDVWMFAVCMWEIL 208

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 38.0 bits (89), Expect = 4e-04
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 10/71 (14%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNF--EVNVSTA------DVVLLSTWVYN 52
           +SPE      +  +SDVYS G VL E++     F  +  VS A      D +  S     
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEG 245

Query: 53  CFIAKELNKLV 63
             ++ +L+ +V
Sbjct: 246 --LSADLDAVV 254

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 38.1 bits (89), Expect = 4e-04
 Identities = 11/28 (39%), Positives = 18/28 (64%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
            +PE  +    T  SDV+SFG+V+ E++
Sbjct: 217 TAPEAISYRKFTSASDVWSFGIVMWEVM 244

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 38.0 bits (89), Expect = 4e-04
 Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 8/44 (18%)

Query: 1   MSPE-WQNSGLITVKSDVYSFGVVLLEIVCC-------RSNFEV 36
           + PE  +N   + + +D +SFG  L EI            +   
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK 227

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 38.0 bits (89), Expect = 4e-04
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 7/43 (16%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCC-------RSNFEV 36
            SPE  +    + KSDV+SFGV++ E+          RSN EV
Sbjct: 172 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 214

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 38.0 bits (89), Expect = 4e-04
 Identities = 10/28 (35%), Positives = 18/28 (64%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
           M+ E     + T +SDV+S+GV + E++
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELM 213

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 38.1 bits (89), Expect = 4e-04
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
            SPE       T  SDV+S+G+VL E++
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVM 244

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 37.7 bits (88), Expect = 5e-04
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
            +PE        + SDV+SFGV L E++
Sbjct: 196 YAPECLMQSKFYIASDVWSFGVTLHELL 223

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 37.7 bits (88), Expect = 6e-04
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
            +PE       +V SDV+SFGVVL E+ 
Sbjct: 215 YAPESLTESKFSVASDVWSFGVVLYELF 242

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 37.3 bits (87), Expect = 7e-04
 Identities = 12/28 (42%), Positives = 19/28 (67%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
            +PE  +  + + +SDV+SFGVVL E+ 
Sbjct: 197 YAPESLSDNIFSRQSDVWSFGVVLYELF 224

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 37.3 bits (87), Expect = 8e-04
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
            +PE       +V SDV+SFGVVL E+ 
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELF 211

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 37.3 bits (87), Expect = 8e-04
 Identities = 11/28 (39%), Positives = 19/28 (67%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
           M+ E  + G  T +SDV+S+GV + E++
Sbjct: 184 MALESIHFGKYTHQSDVWSYGVTVWELM 211

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 36.9 bits (86), Expect = 9e-04
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIV 28
            +PE       +  SDV+SFGVV+ E++
Sbjct: 221 TAPEAIAFRTFSSASDVWSFGVVMWEVL 248

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	145
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.82
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.82
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.8
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.79
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.78
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.73
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.7
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.67
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.67
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.66
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.66
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.65
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.63
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.63
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.61
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.6
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.6
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.59
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.58
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.58
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.58
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.58
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.58
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.58
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.58
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.57
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.57
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.56
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.56
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.56
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.56
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.56
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.55
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.55
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.55
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.55
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.55
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.55
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.54
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.54
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.54
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.54
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.54
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.53
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.53
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.53
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.53
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.53
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.53
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.52
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.52
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.52
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.52
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.52
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.52
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.52
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.52
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.51
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.51
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.51
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.51
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.51
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.51
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.51
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.51
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.51
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.51
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.5
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.5
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.5
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.5
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.5
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.5
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.5
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.5
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.5
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.49
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.49
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.49
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.49
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.49
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.49
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.49
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.49
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.48
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.48
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.48
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.47
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.47
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.47
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.47
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.47
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.46
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.46
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.46
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.46
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.46
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.46
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.46
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.45
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.45
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.45
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.45
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.45
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.45
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.44
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.44
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.44
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.44
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.44
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.44
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.43
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.43
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.43
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.43
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.43
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.43
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.43
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.43
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.43
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.43
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.43
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.43
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.43
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.43
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.42
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.42
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.42
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.42
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.42
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.42
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.42
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.42
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.41
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.41
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.41
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.41
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.41
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.41
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.41
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.41
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.41
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.41
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.41
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.4
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.4
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.4
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.4
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.39
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.39
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.39
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.39
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.39
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.39
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.39
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.39
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.38
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.38
3bhy_A	283	Death-associated protein kinase 3; death associate	99.38
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.38
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.38
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.38
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.38
3niz_A	311	Rhodanese family protein; structural genomics, str	99.38
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.38
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.38
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.38
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.38
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.37
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.37
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.37
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.37
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.37
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.37
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.37
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.37
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.37
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.37
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.37
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.37
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.36
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.36
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.36
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.36
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.36
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.36
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.36
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.36
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.36
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.36
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.35
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.35
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.35
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.35
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.35
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.35
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.35
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.35
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.34
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.34
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.34
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.34
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.34
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.34
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.34
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.33
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.33
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.33
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.33
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.33
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.33
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.33
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.32
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.32
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.32
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.32
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.32
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.32
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.32
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.32
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.31
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.31
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.31
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.3
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.3
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.3
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.3
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.3
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.3
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.29
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.29
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.28
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.28
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.28
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.28
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.27
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.27
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.27
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.26
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.19
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.16
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.16
3uqc_A	286	Probable conserved transmembrane protein; structur	99.13
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.12
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.11
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.1
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.09
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.07
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	98.91
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	97.97

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.82  E-value=3.6e-21  Score=130.22  Aligned_cols=91  Identities=21%  Similarity=0.241  Sum_probs=69.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++.++.|+.++|||||||++||+++ |..||... ...   .+.....           -...++.|..++..+.+
T Consensus       214 mAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~-~~~---~~~~~i~-----------~~~~~~~p~~~~~~~~~  278 (308)
T 4gt4_A          214 MAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY-SNQ---DVVEMIR-----------NRQVLPCPDDCPAWVYA  278 (308)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC-CHH---HHHHHHH-----------TTCCCCCCTTCCHHHHH
T ss_pred             cCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCC-CHH---HHHHHHH-----------cCCCCCCcccchHHHHH
Confidence            79999999999999999999999999998 78888754 111   1111110           01122344556677999


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      |+.+||+.+|.+||+|.+|+..|+...
T Consensus       279 li~~C~~~dP~~RPs~~ei~~~L~a~~  305 (308)
T 4gt4_A          279 LMIECWNEFPSRRPRFKDIHSRLRAWG  305 (308)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             HHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence            999999999999999999999998754

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.82  E-value=3.8e-21  Score=131.21  Aligned_cols=95  Identities=29%  Similarity=0.314  Sum_probs=72.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++.+..++.++|||||||++|||++ |+.||... ...   .+.....           -..+++.|..++..+.+
T Consensus       227 mAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~-~~~---~~~~~i~-----------~g~~~~~p~~~~~~~~~  291 (329)
T 4aoj_A          227 MPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL-SNT---EAIDCIT-----------QGRELERPRACPPEVYA  291 (329)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSS-CHH---HHHHHHH-----------HTCCCCCCTTCCHHHHH
T ss_pred             cChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCC-CHH---HHHHHHH-----------cCCCCCCcccccHHHHH
Confidence            79999999999999999999999999998 89998754 111   1111110           01122334445677899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEIPV  110 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~~~  110 (145)
                      |+.+||+.||.+|||+.+|+..|+.+.+.++
T Consensus       292 li~~cl~~dP~~RPs~~ei~~~L~~l~~~pp  322 (329)
T 4aoj_A          292 IMRGCWQREPQQRHSIKDVHARLQALAQAPP  322 (329)
T ss_dssp             HHHHHCCSSTTTSCCHHHHHHHHHHHHHSCC
T ss_pred             HHHHHcCcChhHCcCHHHHHHHHHHHhhCCc
Confidence            9999999999999999999999998876543

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.80  E-value=9.9e-21  Score=127.62  Aligned_cols=93  Identities=26%  Similarity=0.321  Sum_probs=70.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++.+..|+.++|||||||++|||++ |+.||... ...   .+.....    .       ...++.|..++..+.+
T Consensus       197 mAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~-~~~---~~~~~i~----~-------~~~~~~p~~~~~~~~~  261 (299)
T 4asz_A          197 MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL-SNN---EVIECIT----Q-------GRVLQRPRTCPQEVYE  261 (299)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-CHH---HHHHHHH----H-------TCCCCCCTTCCHHHHH
T ss_pred             cCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC-CHH---HHHHHHH----c-------CCCCCCCccchHHHHH
Confidence            79999999999999999999999999998 89998754 111   1111110    0       1112234445667899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      |+.+||+.||.+||++.+|+..|+.+.+.
T Consensus       262 li~~cl~~dP~~RPs~~~i~~~L~~~~~~  290 (299)
T 4asz_A          262 LMLGCWQREPHMRKNIKGIHTLLQNLAKA  290 (299)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            99999999999999999999999887653

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.79  E-value=1.6e-20  Score=129.15  Aligned_cols=93  Identities=27%  Similarity=0.368  Sum_probs=69.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++.+..|+.++|||||||++|||++ |..||............+            ..  ..++..|..++..+.+
T Consensus       254 mAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i------------~~--g~~~~~p~~~~~~~~~  319 (353)
T 4ase_A          254 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL------------KE--GTRMRAPDYTTPEMYQ  319 (353)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHH------------HH--TCCCCCCTTCCHHHHH
T ss_pred             cCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHH------------Hc--CCCCCCCccCCHHHHH
Confidence            79999999999999999999999999998 898987542111111111            00  1112234445667899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++.+||+.||.+|||+.+|++.|+.+.+
T Consensus       320 li~~c~~~dP~~RPt~~eil~~L~~llq  347 (353)
T 4ase_A          320 TMLDCWHGEPSQRPTFSELVEHLGNLLQ  347 (353)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence            9999999999999999999999987653

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.78  E-value=1.3e-19  Score=122.45  Aligned_cols=96  Identities=20%  Similarity=0.344  Sum_probs=67.9

Q ss_pred             CCCccccc---CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcc-hhhcHHHHHH
Q 032213            1 MSPEWQNS---GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGED-EEVDLRTLET   76 (145)
Q Consensus         1 ~aPe~~~~---~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   76 (145)
                      ||||++.+   +.|+.++|||||||++|||++|+.||.............        .   .....+. ...+..++..
T Consensus       201 mAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~--------~---~~~~~p~~~~~~~~~~~~  269 (307)
T 3omv_A          201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMV--------G---RGYASPDLSKLYKNCPKA  269 (307)
T ss_dssp             CCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHH--------H---TTCCCCCSTTSCTTSCHH
T ss_pred             cCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHH--------h---cCCCCCCcccccccchHH
Confidence            79999863   458999999999999999999999997531111111100        0   0011111 1233445667


Q ss_pred             HHHHHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           77 MVRVRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        77 ~~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      +.+|+.+||+.+|.+|||+.+|+..|+.+..
T Consensus       270 l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~  300 (307)
T 3omv_A          270 MKRLVADCVKKVKEERPLFPQILSSIELLQH  300 (307)
T ss_dssp             HHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence            8999999999999999999999998887653

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.73  E-value=2.4e-18  Score=117.42  Aligned_cols=93  Identities=13%  Similarity=0.102  Sum_probs=68.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..|+.++||||+||++|||++|..||...........+..        .     ..+....+...+..+.+|
T Consensus       223 mAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~--------~-----~~~~~~~~~~~s~~~~~l  289 (336)
T 4g3f_A          223 MAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIAS--------E-----PPPIREIPPSCAPLTAQA  289 (336)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHH--------S-----CCGGGGSCTTSCHHHHHH
T ss_pred             cCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHc--------C-----CCCchhcCccCCHHHHHH
Confidence            799999999999999999999999999999999975422211111110        0     000012334456678999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      +.+||+.||.+|||+.|+++.|....
T Consensus       290 i~~~L~~dP~~R~sa~el~~~l~~~l  315 (336)
T 4g3f_A          290 IQEGLRKEPVHRASAMELRRKVGKAL  315 (336)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHccCCHhHCcCHHHHHHHHHHHH
Confidence            99999999999999999998876543

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.70  E-value=1.9e-18  Score=116.75  Aligned_cols=103  Identities=15%  Similarity=0.092  Sum_probs=65.5

Q ss_pred             CCCcccccC------CcccccchhhHHHHHHHHHhCCCCCCCCCCchh----h---HhHHHHHHHHHHHhHhhhhhCcch
Q 032213            1 MSPEWQNSG------LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTAD----V---VLLSTWVYNCFIAKELNKLVGEDE   67 (145)
Q Consensus         1 ~aPe~~~~~------~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~   67 (145)
                      ||||++.+.      .++.++|||||||++|||++|..|+........    .   .........    .......++..
T Consensus       179 mAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~----~~~~~~~rp~~  254 (303)
T 3hmm_A          179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRK----VVCEQKLRPNI  254 (303)
T ss_dssp             CCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHH----HHTTSCCCCCC
T ss_pred             cCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHH----HHhcccCCCCC
Confidence            799998653      467899999999999999999876532210000    0   000000000    00011111111


Q ss_pred             ---hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           68 ---EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        68 ---~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                         .........+.+|+.+||+.||.+|||+.+|++.|+.+.+
T Consensus       255 p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~  297 (303)
T 3hmm_A          255 PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             CGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence               1123456778999999999999999999999999988754

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.67  E-value=2.5e-17  Score=111.80  Aligned_cols=108  Identities=31%  Similarity=0.549  Sum_probs=77.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcch--hhcHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDE--EVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   78 (145)
                      +|||++.+..++.++|+||||++++++++|+.|+..... ........|.........+...+++..  ..+......+.
T Consensus       208 ~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  286 (321)
T 2qkw_B          208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP-REMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFG  286 (321)
T ss_dssp             CCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSS-SSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHH
T ss_pred             cCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCc-HHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHH
Confidence            589988888899999999999999999999999865422 222223333322222222223333322  34566788899


Q ss_pred             HHHHhcccCCCCCCCCHHHHHHHhhccCCCC
Q 032213           79 RVRLLCIQDEPNLRPSMKNVILMLEGTMEIP  109 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~~  109 (145)
                      +++.+||..+|.+||++.++++.|+.+....
T Consensus       287 ~li~~~l~~dP~~Rps~~ell~~L~~~l~~~  317 (321)
T 2qkw_B          287 DTAVKCLALSSEDRPSMGDVLWKLEYALRLQ  317 (321)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             HHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence            9999999999999999999999999776543

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.67  E-value=5e-17  Score=109.07  Aligned_cols=86  Identities=21%  Similarity=0.327  Sum_probs=59.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+ .|+.++|||||||++|||++|..||........   +...         +..-..+ ...+...+..+.+|
T Consensus       197 mAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~---~~~~---------i~~~~~~-~~~~~~~~~~~~~l  262 (290)
T 3fpq_A          197 MAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ---IYRR---------VTSGVKP-ASFDKVAIPEVKEI  262 (290)
T ss_dssp             CCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH---HHHH---------HTTTCCC-GGGGGCCCHHHHHH
T ss_pred             cCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH---HHHH---------HHcCCCC-CCCCccCCHHHHHH
Confidence            79998864 699999999999999999999999964311111   1100         0000000 01122224468899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..||.+|||+.+++.
T Consensus       263 i~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          263 IEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHccCChhHCcCHHHHhc
Confidence            99999999999999999975

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.66  E-value=3.1e-17  Score=112.36  Aligned_cols=87  Identities=11%  Similarity=0.135  Sum_probs=63.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..|+.++||||+||+++||++|..||... ...   .....         +.....+....+...+..+.+|
T Consensus       237 mAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~-~~~---~~~~~---------i~~~~~~~~~~~~~~s~~~~dl  303 (346)
T 4fih_A          237 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE-PPL---KAMKM---------IRDNLPPRLKNLHKVSPSLKGF  303 (346)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-CHH---HHHHH---------HHHSSCCCCSCGGGSCHHHHHH
T ss_pred             CCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-CHH---HHHHH---------HHcCCCCCCCccccCCHHHHHH
Confidence            7999999889999999999999999999999999743 111   11111         1111112222233445678999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..||.+|||+.|++.
T Consensus       304 i~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          304 LDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             HHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHcCCChhHCcCHHHHhc
Confidence            99999999999999999875

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.66  E-value=3.2e-17  Score=112.45  Aligned_cols=85  Identities=24%  Similarity=0.313  Sum_probs=62.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..|+.++||||+||++|||++|..||... ..   ..+.....    ..    ..   .+.+...+..+.+|
T Consensus       192 mAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~-~~---~~~~~~i~----~~----~~---~~~~~~~s~~~~~l  256 (350)
T 4b9d_A          192 LSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG-SM---KNLVLKII----SG----SF---PPVSLHYSYDLRSL  256 (350)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS-SH---HHHHHHHH----HT----CC---CCCCTTSCHHHHHH
T ss_pred             cCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-CH---HHHHHHHH----cC----CC---CCCCccCCHHHHHH
Confidence            7999999989999999999999999999999999754 11   11111100    00    01   11223345678999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||+.||.+||++.++++
T Consensus       257 i~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          257 VSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             HHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHccCChhHCcCHHHHhc
Confidence            99999999999999999975

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.65  E-value=5.4e-17  Score=108.10  Aligned_cols=84  Identities=20%  Similarity=0.218  Sum_probs=61.3

Q ss_pred             CCCcccccCCc-ccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLI-TVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~-~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++.+..+ +.++|+||+||++++|++|..||... .   ...+...            +.......+...+..+.+
T Consensus       178 ~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~-~---~~~~~~~------------i~~~~~~~p~~~s~~~~~  241 (275)
T 3hyh_A          178 AAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE-S---IPVLFKN------------ISNGVYTLPKFLSPGAAG  241 (275)
T ss_dssp             SCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-S---HHHHHHH------------HHHTCCCCCTTSCHHHHH
T ss_pred             CChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC-C---HHHHHHH------------HHcCCCCCCCCCCHHHHH
Confidence            79999987775 57899999999999999999999743 1   1111111            111111223334566889


Q ss_pred             HHHhcccCCCCCCCCHHHHHH
Q 032213           80 VRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      |+.+||+.||.+|||+.++++
T Consensus       242 li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          242 LIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHccCChhHCcCHHHHHc
Confidence            999999999999999999986

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.63  E-value=6.8e-17  Score=109.02  Aligned_cols=84  Identities=18%  Similarity=0.180  Sum_probs=61.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..|+.++|+||+||++|||++|..||... ..   ..+...            +.......|...+..+.+|
T Consensus       193 mAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~-~~---~~~~~~------------i~~~~~~~p~~~s~~~~~l  256 (304)
T 3ubd_A          193 MAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK-DR---KETMTM------------ILKAKLGMPQFLSPEAQSL  256 (304)
T ss_dssp             CCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-SH---HHHHHH------------HHHCCCCCCTTSCHHHHHH
T ss_pred             CCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc-CH---HHHHHH------------HHcCCCCCCCcCCHHHHHH
Confidence            7999999999999999999999999999999999753 11   111111            1111122233445678999


Q ss_pred             HHhcccCCCCCCCCH-----HHHHH
Q 032213           81 RLLCIQDEPNLRPSM-----KNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~-----~~v~~  100 (145)
                      +.+||+.||.+||++     .+++.
T Consensus       257 i~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          257 LRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             HHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             HHHHcccCHHHCCCCCcCCHHHHHc
Confidence            999999999999984     56653

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.63  E-value=1e-16  Score=112.34  Aligned_cols=87  Identities=11%  Similarity=0.135  Sum_probs=63.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..|+.++||||+||++|||++|..||... ...   .....         +..........+......+.+|
T Consensus       314 mAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~-~~~---~~~~~---------i~~~~~~~~~~~~~~s~~~~dl  380 (423)
T 4fie_A          314 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE-PPL---KAMKM---------IRDNLPPRLKNLHKVSPSLKGF  380 (423)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-CHH---HHHHH---------HHHSCCCCCSCTTSSCHHHHHH
T ss_pred             CCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-CHH---HHHHH---------HHcCCCCCCcccccCCHHHHHH
Confidence            7999999889999999999999999999999999743 111   11111         1111111122223345678999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..||.+|||+.|++.
T Consensus       381 i~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          381 LDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             HHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHcCCChhHCcCHHHHhc
Confidence            99999999999999999875

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.61  E-value=1.9e-16  Score=107.14  Aligned_cols=95  Identities=25%  Similarity=0.318  Sum_probs=68.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..||..... ..   .....          .........+...+..+.++
T Consensus       206 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~-~~---~~~~~----------~~~~~~~~~~~~~~~~l~~l  271 (309)
T 3p86_A          206 MAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP-AQ---VVAAV----------GFKCKRLEIPRNLNPQVAAI  271 (309)
T ss_dssp             SCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH-HH---HHHHH----------HHSCCCCCCCTTSCHHHHHH
T ss_pred             cChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HH---HHHHH----------HhcCCCCCCCccCCHHHHHH
Confidence            589999888899999999999999999999999864411 11   10000          00111112233445678999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhccCCCC
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEGTMEIP  109 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~~~~~~  109 (145)
                      +.+||..+|.+||++.++++.|+.+.+..
T Consensus       272 i~~~l~~dP~~Rps~~~ll~~L~~~~~~~  300 (309)
T 3p86_A          272 IEGCWTNEPWKRPSFATIMDLLRPLIKSA  300 (309)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred             HHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence            99999999999999999999999877643

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.60  E-value=2e-16  Score=107.48  Aligned_cols=106  Identities=35%  Similarity=0.624  Sum_probs=72.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCC-CchhhHhHHHHHHHHHHHhHhhhhhCcch--hhcHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNV-STADVVLLSTWVYNCFIAKELNKLVGEDE--EVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~   77 (145)
                      +|||++.+..++.++|+||+|++++++++|..|+.... ..........+.........+..+.+...  ..+......+
T Consensus       202 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  281 (326)
T 3uim_A          202 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQL  281 (326)
T ss_dssp             CCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHH
T ss_pred             cCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHH
Confidence            58998888889999999999999999999999985220 01111112222211111111222222211  3455667889


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      .+++.+||+.+|.+||++.+|++.|+...
T Consensus       282 ~~li~~cl~~dP~~Rps~~ell~~L~~~~  310 (326)
T 3uim_A          282 IQVALLCTQSSPMERPKMSEVVRMLEGDG  310 (326)
T ss_dssp             HHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred             HHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence            99999999999999999999999998643

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.60  E-value=8e-17  Score=108.85  Aligned_cols=83  Identities=12%  Similarity=0.161  Sum_probs=61.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..|+.++|+||+||+++||++|..||... .   ...+...            +.......|......+.+|
T Consensus       201 mAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~-~---~~~~~~~------------i~~~~~~~p~~~s~~~~dl  264 (311)
T 4aw0_A          201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-N---EGLIFAK------------IIKLEYDFPEKFFPKARDL  264 (311)
T ss_dssp             CCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS-S---HHHHHHH------------HHHTCCCCCTTCCHHHHHH
T ss_pred             CCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC-C---HHHHHHH------------HHcCCCCCCcccCHHHHHH
Confidence            7999999989999999999999999999999999743 1   1111111            1111112233345568999


Q ss_pred             HHhcccCCCCCCCCHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVI   99 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~   99 (145)
                      +.+||..||.+|+++.|++
T Consensus       265 i~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          265 VEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             HHHHSCSSGGGSTTSGGGT
T ss_pred             HHHHccCCHhHCcChHHHc
Confidence            9999999999999998863

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.59  E-value=1.1e-15  Score=102.33  Aligned_cols=100  Identities=9%  Similarity=-0.022  Sum_probs=68.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||||++++++++|..||...........+ ......    ..   ..+........+..+.++
T Consensus       182 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-~~~~~~----~~---~~~~~~~~~~~~~~l~~l  253 (296)
T 3uzp_A          182 ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY-ERISEK----KM---STPIEVLCKGYPSEFATY  253 (296)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHH-HHHHHH----HH---HSCHHHHTTTSCHHHHHH
T ss_pred             CChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhh-hhhccc----cc---CCchHHHHhhCCHHHHHH
Confidence            5889988888999999999999999999999998754211111111 110000    00   000001112234568999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      +.+||..+|.+||++.++++.|+.+...
T Consensus       254 i~~~l~~dp~~Rps~~~l~~~l~~~~~~  281 (296)
T 3uzp_A          254 LNFCRSLRFDDKPDYSYLRQLFRNLFHR  281 (296)
T ss_dssp             HHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCcCcCCCHHHHHHHHHHHHHh
Confidence            9999999999999999999999987543

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.58  E-value=7.8e-16  Score=109.16  Aligned_cols=93  Identities=27%  Similarity=0.430  Sum_probs=68.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++....++.++||||||++++|+++ |..||... ....   .....         ..  ....+.+...+..+.+
T Consensus       352 ~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~-~~~~---~~~~i---------~~--~~~~~~~~~~~~~l~~  416 (454)
T 1qcf_A          352 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM-SNPE---VIRAL---------ER--GYRMPRPENCPEELYN  416 (454)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-CHHH---HHHHH---------HH--TCCCCCCTTSCHHHHH
T ss_pred             cCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC-CHHH---HHHHH---------Hc--CCCCCCCCCCCHHHHH
Confidence            58999988889999999999999999998 88888643 1111   11110         00  0111223344567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      |+.+||..+|.+||++.+|+..|+.+...
T Consensus       417 li~~cl~~dp~~RPt~~~i~~~L~~~~~~  445 (454)
T 1qcf_A          417 IMMRCWKNRPEERPTFEYIQSVLDDFYTA  445 (454)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred             HHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence            99999999999999999999999987653

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.58  E-value=3.4e-16  Score=108.58  Aligned_cols=91  Identities=26%  Similarity=0.340  Sum_probs=66.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.++.++.++||||||++++|+++ |..|+... .........            ..  ....+.+...+..+.+
T Consensus       282 ~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~-~~~~~~~~~------------~~--~~~~~~~~~~~~~l~~  346 (377)
T 3cbl_A          282 TAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL-SNQQTREFV------------EK--GGRLPCPELCPDAVFR  346 (377)
T ss_dssp             SCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS-CHHHHHHHH------------HT--TCCCCCCTTCCHHHHH
T ss_pred             CCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHH------------Hc--CCCCCCCCCCCHHHHH
Confidence            58999988889999999999999999998 88887643 111111000            00  1111223334567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      |+.+||..+|.+||++.++++.|+.+.
T Consensus       347 li~~cl~~dP~~Rps~~~i~~~L~~i~  373 (377)
T 3cbl_A          347 LMEQCWAYEPGQRPSFSTIYQELQSIR  373 (377)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence            999999999999999999999998764

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.58  E-value=3.7e-15  Score=99.95  Aligned_cols=99  Identities=9%  Similarity=-0.024  Sum_probs=68.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..||.......... ...........       ..........+..+.++
T Consensus       185 ~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~-------~~~~~~~~~~~~~l~~l  256 (298)
T 1csn_A          185 MSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ-KYERIGEKKQS-------TPLRELCAGFPEEFYKY  256 (298)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH-HHHHHHHHHHH-------SCHHHHTTTSCHHHHHH
T ss_pred             CCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHH-HHHHHHhhccC-------ccHHHHHhhCcHHHHHH
Confidence            58898888889999999999999999999999997642221111 11111100000       00001111235578999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      +.+||..+|.+||++.+|++.|+.+..
T Consensus       257 i~~~l~~dp~~RP~~~~l~~~l~~~~~  283 (298)
T 1csn_A          257 MHYARNLAFDATPDYDYLQGLFSKVLE  283 (298)
T ss_dssp             HHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred             HHHHhcCCcccCCCHHHHHHHHHHHHH
Confidence            999999999999999999999988754

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.58  E-value=2.1e-15  Score=101.88  Aligned_cols=95  Identities=23%  Similarity=0.406  Sum_probs=67.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||||++++++++|..|+........  ... +.  .        ........+...+..+.++
T Consensus       170 ~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~-~~--~--------~~~~~~~~~~~~~~~l~~l  236 (307)
T 2eva_A          170 MAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF--RIM-WA--V--------HNGTRPPLIKNLPKPIESL  236 (307)
T ss_dssp             SCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH--HHH-HH--H--------HTTCCCCCBTTCCHHHHHH
T ss_pred             EChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH--HHH-HH--H--------hcCCCCCcccccCHHHHHH
Confidence            589999888899999999999999999999999864311111  110 00  0        0001111222334568899


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      +.+||..+|.+||++.++++.|+.+...
T Consensus       237 i~~~l~~dp~~Rps~~ell~~L~~~~~~  264 (307)
T 2eva_A          237 MTRCWSKDPSQRPSMEEIVKIMTHLMRY  264 (307)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHGGG
T ss_pred             HHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence            9999999999999999999999877643

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.58  E-value=3.6e-15  Score=99.85  Aligned_cols=99  Identities=9%  Similarity=-0.028  Sum_probs=67.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++||||+|++++++++|..||...........+. ......    .   ..+........+..+.++
T Consensus       182 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~-~~~~~~----~---~~~~~~~~~~~~~~l~~l  253 (296)
T 4hgt_A          182 ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYE-RISEKK----M---STPIEVLCKGYPSEFATY  253 (296)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHH-HHHHHH----H---HSCHHHHTTTSCHHHHHH
T ss_pred             cchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhh-hhhccc----c---cchhhhhhccCCHHHHHH
Confidence            58898888889999999999999999999999987542211111111 100000    0   000000111224578999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      +.+||..+|.+||++.++++.|+.+..
T Consensus       254 i~~~l~~~p~~Rpt~~~l~~~l~~~~~  280 (296)
T 4hgt_A          254 LNFCRSLRFDDKPDYSYLRQLFRNLFH  280 (296)
T ss_dssp             HHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence            999999999999999999999987654

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.58  E-value=4.1e-15  Score=102.65  Aligned_cols=102  Identities=13%  Similarity=0.086  Sum_probs=68.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++||||||++++|+++|..||.................    ...+..+++.... ....+..+.++
T Consensus       228 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~l  302 (364)
T 3op5_A          228 TSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRY----RENIASLMDKCFP-AANAPGEIAKY  302 (364)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHH----HHCHHHHHHHHSC-TTCCCHHHHHH
T ss_pred             cCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHh----hhhHHHHHHHhcc-cccCHHHHHHH
Confidence            689999888899999999999999999999999974322211111111100    1111111111100 01224568999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      +..||..+|.+||++.++++.|+.+..
T Consensus       303 i~~cl~~~p~~RP~~~~l~~~l~~~~~  329 (364)
T 3op5_A          303 METVKLLDYTEKPLYENLRDILLQGLK  329 (364)
T ss_dssp             HHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred             HHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence            999999999999999999999887654

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.58  E-value=1.7e-15  Score=107.37  Aligned_cols=93  Identities=25%  Similarity=0.361  Sum_probs=68.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++||||||++++|+++ |..|+... ....   ....         +.  .....+.+...+..+.+
T Consensus       348 ~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~-~~~~---~~~~---------i~--~~~~~~~~~~~~~~l~~  412 (452)
T 1fmk_A          348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNRE---VLDQ---------VE--RGYRMPCPPECPESLHD  412 (452)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC-CHHH---HHHH---------HH--TTCCCCCCTTSCHHHHH
T ss_pred             cCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC-CHHH---HHHH---------HH--cCCCCCCCCCCCHHHHH
Confidence            58999888889999999999999999999 88888643 1111   1110         00  01111233345667899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      ++.+||..+|.+||++.+++..|+.+...
T Consensus       413 li~~cl~~dP~~Rpt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          413 LMCQCWRKEPEERPTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence            99999999999999999999999987654

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.57  E-value=1.3e-14  Score=99.52  Aligned_cols=102  Identities=13%  Similarity=0.085  Sum_probs=66.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||||++++|+++|..||........................+.....     ....+..+.++
T Consensus       227 ~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~l  301 (345)
T 2v62_A          227 TSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAP-----SGSSCCEIAQF  301 (345)
T ss_dssp             CCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSC-----TTSCCHHHHHH
T ss_pred             cCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhcc-----ccccHHHHHHH
Confidence            5899988888999999999999999999999998642111111111000000000000000000     00234578999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      +.+||..+|.+||++.+|++.|+.+..
T Consensus       302 i~~~l~~dp~~Rps~~~l~~~L~~~~~  328 (345)
T 2v62_A          302 LVCAHSLAYDEKPNYQALKKILNPHGI  328 (345)
T ss_dssp             HHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred             HHHHhhcCcccCCCHHHHHHHHhccCC
Confidence            999999999999999999999997543

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.57  E-value=9e-16  Score=108.74  Aligned_cols=92  Identities=26%  Similarity=0.289  Sum_probs=68.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++||||||++++|+++ |..|+... ........+            ..  ..++..+..++..+.+
T Consensus       353 ~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~-~~~~~~~~i------------~~--~~~~~~p~~~~~~l~~  417 (450)
T 1k9a_A          353 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKDVVPRV------------EK--GYKMDAPDGCPPAVYD  417 (450)
T ss_dssp             SCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTS-CTTTHHHHH------------HT--TCCCCCCTTCCHHHHH
T ss_pred             eCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHH------------Hc--CCCCCCCCcCCHHHHH
Confidence            68999988899999999999999999998 88888644 111111110            00  0112233344667899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      |+.+||..+|.+||++.+++..|+.+..
T Consensus       418 li~~cl~~dp~~Rpt~~~l~~~L~~i~~  445 (450)
T 1k9a_A          418 VMKNCWHLDAATRPTFLQLREQLEHIRT  445 (450)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence            9999999999999999999999987653

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.56  E-value=1.1e-15  Score=101.19  Aligned_cols=93  Identities=19%  Similarity=0.349  Sum_probs=64.8

Q ss_pred             CCCcccccCCccc---ccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHH
Q 032213            1 MSPEWQNSGLITV---KSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~~~~~~~---~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (145)
                      +|||++.+..+..   ++|+||+|++++++++|..|+...... .   ...        .....  ......+...+..+
T Consensus       175 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~---~~~--------~~~~~--~~~~~~~~~~~~~~  240 (271)
T 3kmu_A          175 VAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM-E---IGM--------KVALE--GLRPTIPPGISPHV  240 (271)
T ss_dssp             SCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH-H---HHH--------HHHHS--CCCCCCCTTCCHHH
T ss_pred             cChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH-H---HHH--------HHHhc--CCCCCCCCCCCHHH
Confidence            5889887655444   799999999999999999998643111 0   000        00000  01112233345678


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      .+++.+||..+|.+||++.++++.|+.+.+
T Consensus       241 ~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          241 SKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            999999999999999999999999988754

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.56  E-value=1.4e-15  Score=105.34  Aligned_cols=92  Identities=24%  Similarity=0.356  Sum_probs=67.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++||++ |..|+... .........            ..  ......+......+.+
T Consensus       272 ~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~-~~~~~~~~~------------~~--~~~~~~~~~~~~~l~~  336 (370)
T 2psq_A          272 MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEELFKLL------------KE--GHRMDKPANCTNELYM  336 (370)
T ss_dssp             CCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-CGGGHHHHH------------HT--TCCCCCCTTSCHHHHH
T ss_pred             ECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHH------------hc--CCCCCCCCCCCHHHHH
Confidence            68999988889999999999999999998 88888643 111111100            00  0111223334567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++.+||+.+|.+||++.++++.|+.+..
T Consensus       337 li~~~l~~dP~~Rpt~~ell~~L~~il~  364 (370)
T 2psq_A          337 MMRDCWHAVPSQRPTFKQLVEDLDRILT  364 (370)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            9999999999999999999999987653

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.56  E-value=1e-15  Score=101.44  Aligned_cols=91  Identities=22%  Similarity=0.300  Sum_probs=65.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..|+......    .....        ..  ........+...+..+.++
T Consensus       181 ~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~~--------~~--~~~~~~~~~~~~~~~~~~l  246 (271)
T 3dtc_A          181 MAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL----AVAYG--------VA--MNKLALPIPSTCPEPFAKL  246 (271)
T ss_dssp             SCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH----HHHHH--------HH--TSCCCCCCCTTCCHHHHHH
T ss_pred             eCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHh--------hh--cCCCCCCCCcccCHHHHHH
Confidence            5889888888999999999999999999999998743110    00000        00  0001112223345678999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      +.+||..+|.+||++.++++.|+.+
T Consensus       247 i~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          247 MEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             HHHHhcCCcccCcCHHHHHHHHhcC
Confidence            9999999999999999999999864

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.56  E-value=1.2e-15  Score=103.97  Aligned_cols=92  Identities=18%  Similarity=0.279  Sum_probs=67.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++|+++ |..|+... ..........            .  ......+......+.+
T Consensus       186 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~-~~~~~~~~~~------------~--~~~~~~~~~~~~~~~~  250 (327)
T 3poz_A          186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILE------------K--GERLPQPPICTIDVYM  250 (327)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CGGGHHHHHH------------T--TCCCCCCTTBCHHHHH
T ss_pred             cChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCC-CHHHHHHHHH------------c--CCCCCCCccCCHHHHH
Confidence            58999888889999999999999999999 88888643 1111111110            0  0111222334556889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++.+||+.+|.+||++.+++..|+.+..
T Consensus       251 li~~~l~~~p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          251 IMVKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             HHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred             HHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            9999999999999999999999987754

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.56  E-value=2e-14  Score=99.21  Aligned_cols=108  Identities=15%  Similarity=0.186  Sum_probs=66.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCch---hhHhHHHHHHHHHH--------HhH-----------
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTA---DVVLLSTWVYNCFI--------AKE-----------   58 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~---~~~~~~~~~~~~~~--------~~~-----------   58 (145)
                      +|||++.+..++.++|+||+|++++++++|..||.......   ....+.. ......        ...           
T Consensus       202 ~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~  280 (373)
T 1q8y_A          202 RSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ-IIELLGELPSYLLRNGKYTRTFFNSRGL  280 (373)
T ss_dssp             CCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHH-HHHHHCSCCHHHHHHCTTHHHHBCC--C
T ss_pred             cCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHH-HHHhcCCCCHHHHhccchhhhhcCCcch
Confidence            68999988889999999999999999999999987431110   0000100 000000        000           


Q ss_pred             -----------hhhhhCcchhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH--HhhccCCCC
Q 032213           59 -----------LNKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL--MLEGTMEIP  109 (145)
Q Consensus        59 -----------~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~--~L~~~~~~~  109 (145)
                                 +..+.......+......+.+|+.+||..||.+||++.+++.  .+.......
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~  344 (373)
T 1q8y_A          281 LRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGME  344 (373)
T ss_dssp             BSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTTCT
T ss_pred             hcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcccCcc
Confidence                       000011111234566778999999999999999999999987  455444433

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.55  E-value=1.9e-15  Score=108.22  Aligned_cols=92  Identities=27%  Similarity=0.310  Sum_probs=67.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++||||||++++|+++ |..|+... .........            ..  ..+...+...+..+.+
T Consensus       386 ~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~-~~~~~~~~~------------~~--~~~~~~~~~~~~~l~~  450 (495)
T 1opk_A          386 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELL------------EK--DYRMERPEGCPEKVYE  450 (495)
T ss_dssp             CCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC-CGGGHHHHH------------HT--TCCCCCCTTCCHHHHH
T ss_pred             eCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC-CHHHHHHHH------------Hc--CCCCCCCCCCCHHHHH
Confidence            58999988889999999999999999998 88887643 111111110            00  1111223344567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      |+.+||+.+|.+||++.+|++.|+.+..
T Consensus       451 li~~cl~~dP~~RPs~~el~~~L~~~~~  478 (495)
T 1opk_A          451 LMRACWQWNPSDRPSFAEIHQAFETMFQ  478 (495)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred             HHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence            9999999999999999999999998764

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.55  E-value=2.1e-15  Score=110.55  Aligned_cols=91  Identities=19%  Similarity=0.242  Sum_probs=68.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++||||||++++|+++ |..||..... ......+            .  ....+..+..++..+.+
T Consensus       506 ~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-~~~~~~i------------~--~~~~~~~p~~~~~~l~~  570 (613)
T 2ozo_A          506 YAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-PEVMAFI------------E--QGKRMECPPECPPELYA  570 (613)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS-HHHHHHH------------H--TTCCCCCCTTCCHHHHH
T ss_pred             eCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH-HHHHHHH------------H--cCCCCCCCCcCCHHHHH
Confidence            68999988899999999999999999998 9999875411 1111110            0  01112233445667899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      |+.+||..+|.+||++.+|++.|+.+.
T Consensus       571 li~~cl~~dP~~RPs~~~l~~~L~~~~  597 (613)
T 2ozo_A          571 LMSDCWIYKWEDRPDFLTVEQRMRACY  597 (613)
T ss_dssp             HHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             HHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            999999999999999999999988754

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.55  E-value=8.1e-16  Score=104.73  Aligned_cols=95  Identities=19%  Similarity=0.316  Sum_probs=69.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++||||||++++++++ |..|+... ...   .....         +..  ....+.+...+..+.+
T Consensus       221 ~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~-~~~---~~~~~---------~~~--~~~~~~~~~~~~~l~~  285 (325)
T 3kul_A          221 TAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM-TNR---DVISS---------VEE--GYRLPAPMGCPHALHQ  285 (325)
T ss_dssp             SCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTS-CHH---HHHHH---------HHT--TCCCCCCTTCCHHHHH
T ss_pred             cCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccC-CHH---HHHHH---------HHc--CCCCCCCCCcCHHHHH
Confidence            58898888889999999999999999998 88888643 111   11100         000  0111223344567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEIPV  110 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~~~  110 (145)
                      |+.+||..+|.+||++.++++.|+.+...+.
T Consensus       286 li~~~l~~dp~~Rps~~eil~~L~~l~~~~~  316 (325)
T 3kul_A          286 LMLDCWHKDRAQRPRFSQIVSVLDALIRSPE  316 (325)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence            9999999999999999999999998876543

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.55  E-value=6.7e-15  Score=99.15  Aligned_cols=103  Identities=29%  Similarity=0.423  Sum_probs=70.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcch-hhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDE-EVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   79 (145)
                      +|||.+.+ .++.++|+||+|++++++++|..|+...........+.....  .....+...++... ..+......+.+
T Consensus       202 ~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~  278 (307)
T 2nru_A          202 MAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIE--DEEKTIEDYIDKKMNDADSTSVEAMYS  278 (307)
T ss_dssp             CCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHH--TTSCCHHHHSCSSCSCCCHHHHHHHHH
T ss_pred             CChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhh--hhhhhhhhhccccccccchHHHHHHHH
Confidence            57887754 578899999999999999999999875422221111111100  00111222233222 345566778999


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      ++.+||..+|.+||++.++++.|+.+.
T Consensus       279 li~~cl~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          279 VASQCLHEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred             HHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            999999999999999999999998764

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.55  E-value=8e-16  Score=106.65  Aligned_cols=93  Identities=23%  Similarity=0.319  Sum_probs=66.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++||||||++++|+++ |..|+... ...   .+...         +..  ....+.+...+..+.+
T Consensus       217 ~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~-~~~---~~~~~---------i~~--~~~~~~~~~~~~~l~~  281 (373)
T 2qol_A          217 TSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM-SNQ---DVIKA---------VDE--GYRLPPPMDCPAALYQ  281 (373)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTC-CHH---HHHHH---------HHT--TEECCCCTTCBHHHHH
T ss_pred             cChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCC-CHH---HHHHH---------HHc--CCCCCCCccccHHHHH
Confidence            58999888889999999999999999997 88888643 111   11110         000  0011222334567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      ++.+||+.+|.+||++.+|++.|+.+...
T Consensus       282 li~~cl~~dp~~RPs~~~i~~~L~~~~~~  310 (373)
T 2qol_A          282 LMLDCWQKDRNNRPKFEQIVSILDKLIRN  310 (373)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence            99999999999999999999999887543

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.55  E-value=1.1e-15  Score=104.16  Aligned_cols=93  Identities=17%  Similarity=0.230  Sum_probs=68.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+|++++++++ |..|+... ..........              .......+...+..+.+
T Consensus       186 ~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~-~~~~~~~~~~--------------~~~~~~~~~~~~~~l~~  250 (327)
T 3lzb_A          186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILE--------------KGERLPQPPICTIDVYM  250 (327)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CGGGHHHHHH--------------TTCCCCCCTTBCHHHHH
T ss_pred             cCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCC-CHHHHHHHHH--------------cCCCCCCCccCCHHHHH
Confidence            58898888889999999999999999999 88888654 1111111100              00111222334556889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      ++.+||..+|.+||++.+++..|+.+...
T Consensus       251 li~~~l~~dp~~Rps~~ell~~L~~~~~~  279 (327)
T 3lzb_A          251 IMRKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred             HHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence            99999999999999999999999987754

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.54  E-value=5.4e-15  Score=98.74  Aligned_cols=93  Identities=22%  Similarity=0.308  Sum_probs=65.0

Q ss_pred             CCCcccc--cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHH
Q 032213            1 MSPEWQN--SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~--~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (145)
                      +|||++.  ...++.++|+||+|++++++++|..||......  .........    .      .......+...+..+.
T Consensus       193 ~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~----~------~~~~~~~~~~~~~~l~  260 (287)
T 4f0f_A          193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG--KIKFINMIR----E------EGLRPTIPEDCPPRLR  260 (287)
T ss_dssp             SCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCC--HHHHHHHHH----H------SCCCCCCCTTSCHHHH
T ss_pred             cCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccccc--HHHHHHHHh----c------cCCCCCCCcccCHHHH
Confidence            5899884  455788999999999999999999998754211  111111000    0      0011122333456789


Q ss_pred             HHHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           79 RVRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      +++.+||..+|.+||++.++++.|+++
T Consensus       261 ~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          261 NVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             HHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            999999999999999999999999864

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.54  E-value=1.5e-15  Score=103.12  Aligned_cols=94  Identities=23%  Similarity=0.387  Sum_probs=67.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+|++++++++ |..|+..... ...   ....           ........+...+..+.+
T Consensus       206 ~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-~~~---~~~~-----------~~~~~~~~~~~~~~~l~~  270 (323)
T 3qup_A          206 LALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN-AEI---YNYL-----------IGGNRLKQPPECMEEVYD  270 (323)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-GGH---HHHH-----------HTTCCCCCCTTCCHHHHH
T ss_pred             cCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh-HHH---HHHH-----------hcCCCCCCCCccCHHHHH
Confidence            57888888889999999999999999999 8888864311 111   1000           001111223334567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEIP  109 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~~  109 (145)
                      ++.+||..+|.+||++.++++.|+.+...+
T Consensus       271 li~~~l~~dp~~Rps~~~l~~~l~~~l~~~  300 (323)
T 3qup_A          271 LMYQCWSADPKQRPSFTCLRMELENILGHL  300 (323)
T ss_dssp             HHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence            999999999999999999999999887654

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.54  E-value=2e-15  Score=103.80  Aligned_cols=92  Identities=27%  Similarity=0.365  Sum_probs=66.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++||||||++++++++ |..|+.............            ..  ......+......+.+
T Consensus       262 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~------------~~--~~~~~~~~~~~~~l~~  327 (359)
T 3vhe_A          262 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL------------KE--GTRMRAPDYTTPEMYQ  327 (359)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHH------------HH--TCCCCCCTTCCHHHHH
T ss_pred             EChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHH------------Hc--CCCCCCCCCCCHHHHH
Confidence            68999888889999999999999999998 988886542111111100            00  0011122233456899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      ++.+||..+|.+||++.++++.|+.+.
T Consensus       328 li~~~l~~dP~~Rps~~ell~~L~~~~  354 (359)
T 3vhe_A          328 TMLDCWHGEPSQRPTFSELVEHLGNLL  354 (359)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHccCChhhCCCHHHHHHHHHHHH
Confidence            999999999999999999999998765

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.54  E-value=1.4e-15  Score=103.36  Aligned_cols=106  Identities=13%  Similarity=0.077  Sum_probs=65.5

Q ss_pred             CCCccccc-----CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhh-----hhCcch---
Q 032213            1 MSPEWQNS-----GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNK-----LVGEDE---   67 (145)
Q Consensus         1 ~aPe~~~~-----~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---   67 (145)
                      +|||++.+     ..++.++||||||++++|+++|+.||.......... +............+..     ...+..   
T Consensus       200 ~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (322)
T 3soc_A          200 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLP-FEEEIGQHPSLEDMQEVVVHKKKRPVLRDY  278 (322)
T ss_dssp             CCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCT-THHHHCSSCCHHHHHHHHTTSCCCCCCCGG
T ss_pred             cCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccc-hhhhhccCCchhhhhhhhhcccCCCCcccc
Confidence            57888865     346678899999999999999999986532111100 0000000000000000     001110   


Q ss_pred             hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           68 EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        68 ~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      -........+.+|+.+||..||.+||++.+|++.|+.+.+
T Consensus       279 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~  318 (322)
T 3soc_A          279 WQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR  318 (322)
T ss_dssp             GGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            1122446679999999999999999999999999987643

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.53  E-value=3.4e-15  Score=100.69  Aligned_cols=83  Identities=23%  Similarity=0.308  Sum_probs=56.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..|+.++||||+||+++||++   ||...   ........         .+...  ..++..........+|
T Consensus       197 mAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~---~~~~~~~~---------~~~~~--~~p~~~~~~~~~~~~l  259 (299)
T 4g31_A          197 MSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ---MERVRTLT---------DVRNL--KFPPLFTQKYPCEYVM  259 (299)
T ss_dssp             SCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH---HHHHHHHH---------HHHTT--CCCHHHHHHCHHHHHH
T ss_pred             cCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc---cHHHHHHH---------HHhcC--CCCCCCcccCHHHHHH
Confidence            79999999999999999999999999985   55421   11111100         00000  0012222334456789


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||+.||.+|||+.++++
T Consensus       260 i~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          260 VQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             HHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHcCCChhHCcCHHHHhc
Confidence            99999999999999999976

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.53  E-value=5.5e-15  Score=98.93  Aligned_cols=96  Identities=23%  Similarity=0.366  Sum_probs=66.3

Q ss_pred             CCCcccc---cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcch-hhcHHHHHH
Q 032213            1 MSPEWQN---SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDE-EVDLRTLET   76 (145)
Q Consensus         1 ~aPe~~~---~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   76 (145)
                      +|||++.   +..++.++|+||+|++++++++|..|+.............       ...    ...... ......+..
T Consensus       189 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~-------~~~----~~~~~~~~~~~~~~~~  257 (289)
T 3og7_A          189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV-------GRG----SLSPDLSKVRSNCPKR  257 (289)
T ss_dssp             CCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHH-------HHT----SCCCCTTSSCTTSCHH
T ss_pred             cCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHh-------ccc----ccCcchhhccccCCHH
Confidence            5788875   5567889999999999999999999987542211111110       000    111111 112233567


Q ss_pred             HHHHHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           77 MVRVRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        77 ~~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      +.+++.+||..+|.+||++.++++.|+.+.+
T Consensus       258 l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          258 MKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             HHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence            8999999999999999999999999998764

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.53  E-value=4.5e-15  Score=99.64  Aligned_cols=101  Identities=17%  Similarity=0.187  Sum_probs=64.3

Q ss_pred             CCCcccccC------CcccccchhhHHHHHHHHHhC----------CCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhC
Q 032213            1 MSPEWQNSG------LITVKSDVYSFGVVLLEIVCC----------RSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVG   64 (145)
Q Consensus         1 ~aPe~~~~~------~~~~~~dv~s~g~v~~el~~g----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   64 (145)
                      +|||++.+.      .++.++||||||++++|+++|          ..|+...............   ........... 
T Consensus       184 ~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~-  259 (301)
T 3q4u_A          184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRK---VVCVDQQRPNI-  259 (301)
T ss_dssp             CCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHH---HHTTSCCCCCC-
T ss_pred             eChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhH---HHhccCCCCCC-
Confidence            588888765      455789999999999999999          6666543111111111000   00000000000 


Q ss_pred             cchhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           65 EDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        65 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      +...........+.+|+.+||..+|.+||++.++++.|+++
T Consensus       260 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          260 PNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             CGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             ChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            00012334577899999999999999999999999999864

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.53  E-value=2.7e-15  Score=103.71  Aligned_cols=93  Identities=26%  Similarity=0.373  Sum_probs=67.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++||||||++++|+++ |..|+... ...   .+....         ..  ......+...+..+.+
T Consensus       253 ~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~-~~~---~~~~~i---------~~--~~~~~~~~~~~~~l~~  317 (367)
T 3l9p_A          253 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-SNQ---EVLEFV---------TS--GGRMDPPKNCPGPVYR  317 (367)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-CHH---HHHHHH---------HT--TCCCCCCTTCCHHHHH
T ss_pred             ECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-CHH---HHHHHH---------Hc--CCCCCCCccCCHHHHH
Confidence            58999888889999999999999999998 88888643 111   111100         00  0011122233556889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      |+.+||+.+|.+||++.+|++.|+.+...
T Consensus       318 li~~~l~~dP~~Rps~~eil~~l~~~~~~  346 (367)
T 3l9p_A          318 IMTQCWQHQPEDRPNFAIILERIEYCTQD  346 (367)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence            99999999999999999999999877653

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.53  E-value=4.1e-15  Score=107.46  Aligned_cols=93  Identities=25%  Similarity=0.378  Sum_probs=68.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++||||||++++||++ |..||... ....   ....         +..  ..+...+..++..+.+
T Consensus       431 ~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~-~~~~---~~~~---------i~~--~~~~~~~~~~~~~l~~  495 (535)
T 2h8h_A          431 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNRE---VLDQ---------VER--GYRMPCPPECPESLHD  495 (535)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC-CHHH---HHHH---------HHT--TCCCCCCTTCCHHHHH
T ss_pred             cCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-CHHH---HHHH---------HHc--CCCCCCCCCCCHHHHH
Confidence            58999888889999999999999999999 88887643 1111   1110         000  0111223344567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      |+.+||..+|.+||++.+|+..|+.+...
T Consensus       496 li~~cl~~dP~~RPt~~~l~~~L~~~~~~  524 (535)
T 2h8h_A          496 LMCQCWRKEPEERPTFEYLQAFLEDYFTS  524 (535)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred             HHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence            99999999999999999999999987654

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.53  E-value=4.5e-15  Score=98.21  Aligned_cols=93  Identities=18%  Similarity=0.341  Sum_probs=66.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||.+.+..++.++|+||+|++++++++ |..|+..... ..   ....         +..  ......+...+..+.+
T Consensus       172 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~---~~~~---------~~~--~~~~~~~~~~~~~l~~  236 (268)
T 3sxs_A          172 SAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN-SE---VVLK---------VSQ--GHRLYRPHLASDTIYQ  236 (268)
T ss_dssp             CCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH-HH---HHHH---------HHT--TCCCCCCTTSCHHHHH
T ss_pred             CCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh-HH---HHHH---------HHc--CCCCCCCCcChHHHHH
Confidence            57888888888999999999999999998 8888864311 11   0000         000  0001112223456889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      ++.+||..+|.+||++.++++.|+.+.+.
T Consensus       237 li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          237 IMYSCWHELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             HHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence            99999999999999999999999988754

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.52  E-value=1.2e-14  Score=100.42  Aligned_cols=37  Identities=27%  Similarity=0.334  Sum_probs=32.8

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCC
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVN   37 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~   37 (145)
                      ||||++.+. .++.++|+||+||+++||++|+.||...
T Consensus       213 ~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~  250 (361)
T 4f9c_A          213 RAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA  250 (361)
T ss_dssp             CCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred             cCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence            699998765 5889999999999999999999999754

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.52  E-value=2.3e-15  Score=102.41  Aligned_cols=93  Identities=25%  Similarity=0.242  Sum_probs=67.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+|++++++++ |..|+..... ........            .  ......+......+.+
T Consensus       184 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-~~~~~~~~------------~--~~~~~~~~~~~~~~~~  248 (325)
T 3kex_A          184 MALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL-AEVPDLLE------------K--GERLAQPQICTIDVYM  248 (325)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT-THHHHHHH------------T--TCBCCCCTTBCTTTTH
T ss_pred             cChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH-HHHHHHHH------------c--CCCCCCCCcCcHHHHH
Confidence            58898888889999999999999999999 9999875411 11111100            0  0011112223445788


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      ++.+||..+|.+||++.+++..|+.+...
T Consensus       249 li~~~l~~dp~~Rps~~el~~~l~~~~~~  277 (325)
T 3kex_A          249 VMVKCWMIDENIRPTFKELANEFTRMARD  277 (325)
T ss_dssp             HHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            99999999999999999999999987653

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.52  E-value=2e-14  Score=97.89  Aligned_cols=97  Identities=7%  Similarity=-0.077  Sum_probs=65.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||||++++|+++|..||..... ...............      .... .......+ .+.++
T Consensus       184 ~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~-~~~~~~~~~i~~~~~------~~~~-~~~~~~~p-~~~~l  254 (330)
T 2izr_A          184 MSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA-DTLKERYQKIGDTKR------ATPI-EVLCENFP-EMATY  254 (330)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-SSHHHHHHHHHHHHH------HSCH-HHHTTTCH-HHHHH
T ss_pred             cChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccc-ccHHHHHHHHHhhhc------cCCH-HHHhccCh-HHHHH
Confidence            589998888899999999999999999999999975421 111111111110000      0000 00000123 78999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      +..||..+|.+||++.+|.+.|+.+.
T Consensus       255 i~~~l~~~p~~RP~~~~l~~~l~~~~  280 (330)
T 2izr_A          255 LRYVRRLDFFEKPDYDYLRKLFTDLF  280 (330)
T ss_dssp             HHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence            99999999999999999999887654

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.52  E-value=2.3e-16  Score=107.01  Aligned_cols=105  Identities=22%  Similarity=0.283  Sum_probs=68.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhC--cchhhcHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVG--EDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~   78 (145)
                      +|||++.+..++.++|+||+|++++++++|..|+...  .........+.........+...+.  .....+...+..+.
T Consensus       204 ~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  281 (318)
T 3lxp_A          204 YAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSP--PTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVY  281 (318)
T ss_dssp             CCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSH--HHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHH
T ss_pred             eChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCccccc--chhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHH
Confidence            5788888888889999999999999999999887632  1110000000000000001111111  11122334456799


Q ss_pred             HHHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           79 RVRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      +|+.+||..+|.+||++.++++.|+.+.+
T Consensus       282 ~li~~~l~~dP~~Rps~~ell~~L~~l~~  310 (318)
T 3lxp_A          282 HLMKNCWETEASFRPTFENLIPILKTVHE  310 (318)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence            99999999999999999999999987654

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.52  E-value=4.5e-15  Score=101.38  Aligned_cols=93  Identities=24%  Similarity=0.230  Sum_probs=67.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++++++ |..|+... ...   .+....    ...       .....+...+..+.+
T Consensus       243 ~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~-~~~---~~~~~~----~~~-------~~~~~~~~~~~~l~~  307 (343)
T 1luf_A          243 MPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM-AHE---EVIYYV----RDG-------NILACPENCPLELYN  307 (343)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-CHH---HHHHHH----HTT-------CCCCCCTTCCHHHHH
T ss_pred             cChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC-ChH---HHHHHH----hCC-------CcCCCCCCCCHHHHH
Confidence            58998888889999999999999999998 88888643 111   111000    000       001122334557899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      ++.+||..+|.+||++.++++.|+.+...
T Consensus       308 li~~~l~~~p~~Rps~~~~~~~L~~~~~~  336 (343)
T 1luf_A          308 LMRLCWSKLPADRPSFCSIHRILQRMCER  336 (343)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred             HHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence            99999999999999999999999987754

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.52  E-value=4e-15  Score=99.66  Aligned_cols=91  Identities=26%  Similarity=0.344  Sum_probs=66.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+|++++++++ |..|+... ....   ....         +..  ......+...+..+.+
T Consensus       187 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-~~~~---~~~~---------~~~--~~~~~~~~~~~~~l~~  251 (291)
T 1xbb_A          187 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM-KGSE---VTAM---------LEK--GERMGCPAGCPREMYD  251 (291)
T ss_dssp             CCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTC-CHHH---HHHH---------HHT--TCCCCCCTTCCHHHHH
T ss_pred             eChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCC-CHHH---HHHH---------HHc--CCCCCCCCCCCHHHHH
Confidence            57888887788899999999999999998 99888643 1111   1100         000  0111223334567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      ++.+||..+|.+||++.++++.|+.+.
T Consensus       252 li~~~l~~dp~~Rps~~~l~~~L~~~~  278 (291)
T 1xbb_A          252 LMNLCWTYDVENRPGFAAVELRLRNYY  278 (291)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            999999999999999999999998764

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.52  E-value=3.9e-15  Score=103.20  Aligned_cols=93  Identities=24%  Similarity=0.349  Sum_probs=65.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++|+++ |..|+... .........      .        .......+...+..+.+
T Consensus       263 ~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~-~~~~~~~~~------~--------~~~~~~~p~~~~~~l~~  327 (373)
T 3c1x_A          263 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYL------L--------QGRRLLQPEYCPDPLYE  327 (373)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS-CSSCHHHHH------H--------TTCCCCCCTTCCHHHHH
T ss_pred             cChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCC-CHHHHHHHH------H--------cCCCCCCCCCCCHHHHH
Confidence            58998888889999999999999999999 55565433 111111100      0        00111122233556899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      ++.+||..+|.+||++.++++.|+.+...
T Consensus       328 li~~cl~~dp~~RPs~~ell~~L~~i~~~  356 (373)
T 3c1x_A          328 VMLKCWHPKAEMRPSFSELVSRISAIFST  356 (373)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            99999999999999999999999987643

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.52  E-value=4.7e-15  Score=98.81  Aligned_cols=91  Identities=24%  Similarity=0.282  Sum_probs=65.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++++++ |..|+...... ......   .    .       ......+...+..+.+
T Consensus       181 ~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~-~~~~~~---~----~-------~~~~~~~~~~~~~l~~  245 (281)
T 3cc6_A          181 MSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK-DVIGVL---E----K-------GDRLPKPDLCPPVLYT  245 (281)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG-GHHHHH---H----H-------TCCCCCCTTCCHHHHH
T ss_pred             eCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH-HHHHHH---h----c-------CCCCCCCCCCCHHHHH
Confidence            58898888889999999999999999998 99888643111 111100   0    0       0011122223456899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      ++.+||..+|.+||++.+++..|+.+.
T Consensus       246 li~~~l~~~p~~Rps~~ell~~L~~~~  272 (281)
T 3cc6_A          246 LMTRCWDYDPSDRPRFTELVCSLSDVY  272 (281)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHccCCchhCcCHHHHHHHHHHHH
Confidence            999999999999999999999998764

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.51  E-value=9.6e-16  Score=102.81  Aligned_cols=105  Identities=21%  Similarity=0.263  Sum_probs=67.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHH-HHHHHH-hHhhhhh-CcchhhcHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWV-YNCFIA-KELNKLV-GEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~-~~~~~~~~~~~~~~   77 (145)
                      +|||++.+..++.++||||||++++++++|..|+...  ........... ...... .....+. ....+.+...+..+
T Consensus       184 ~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  261 (295)
T 3ugc_A          184 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP--PAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEI  261 (295)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSH--HHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHH
T ss_pred             eCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCC--hHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHH
Confidence            5899888888999999999999999999998886532  11000000000 000000 0000000 11112333446678


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      .+++.+||..+|.+||++.++++.|+.+..
T Consensus       262 ~~li~~~l~~dp~~Rps~~el~~~L~~l~~  291 (295)
T 3ugc_A          262 YMIMTECWNNNVNQRPSFRDLALRVDQIRD  291 (295)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence            999999999999999999999999987653

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.51  E-value=4.1e-15  Score=101.71  Aligned_cols=94  Identities=24%  Similarity=0.315  Sum_probs=67.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++++++ |..|+.............            ....  ....+...+..+.+
T Consensus       241 ~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~------------~~~~--~~~~~~~~~~~l~~  306 (344)
T 1rjb_A          241 MAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLI------------QNGF--KMDQPFYATEEIYI  306 (344)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHH------------HTTC--CCCCCTTCCHHHHH
T ss_pred             cCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHH------------hcCC--CCCCCCCCCHHHHH
Confidence            58998888889999999999999999998 888886542111111100            0000  11122233567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      |+.+||..+|.+||++.+++..|+.+...
T Consensus       307 li~~~l~~dp~~Rps~~~l~~~l~~~~~~  335 (344)
T 1rjb_A          307 IMQSCWAFDSRKRPSFPNLTSFLGCQLAD  335 (344)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred             HHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence            99999999999999999999999987654

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.51  E-value=5.8e-15  Score=108.56  Aligned_cols=90  Identities=26%  Similarity=0.330  Sum_probs=66.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++||||||++++|+++ |..||... ....   ....         +.  .......+...+..+.+
T Consensus       539 ~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~-~~~~---~~~~---------i~--~~~~~~~p~~~~~~l~~  603 (635)
T 4fl3_A          539 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM-KGSE---VTAM---------LE--KGERMGCPAGCPREMYD  603 (635)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC-CHHH---HHHH---------HH--TTCCCCCCTTCCHHHHH
T ss_pred             eChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-CHHH---HHHH---------HH--cCCCCCCCCCCCHHHHH
Confidence            58999988889999999999999999998 99998643 1111   1100         00  01111233345667899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      |+..||..+|.+||++.+|++.|+.+
T Consensus       604 li~~cl~~dP~~RPs~~~l~~~L~~~  629 (635)
T 4fl3_A          604 LMNLCWTYDVENRPGFAAVELRLRNY  629 (635)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            99999999999999999999998865

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.51  E-value=3.2e-14  Score=101.61  Aligned_cols=97  Identities=9%  Similarity=-0.005  Sum_probs=67.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|||+||++++||++|..||...........+ ...........+.       ......+..+.+|
T Consensus       180 ~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~-~~i~~~~~~~~~~-------~l~~~~p~~l~~l  251 (483)
T 3sv0_A          180 ASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKY-EKISEKKVATSIE-------ALCRGYPTEFASY  251 (483)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHH-HHHHHHHHHSCHH-------HHHTTSCHHHHHH
T ss_pred             cCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHH-HHHhhccccccHH-------HHhcCCcHHHHHH
Confidence            5788888888999999999999999999999999764222111111 1111110000000       1111234578999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      +..||..+|.+||++.+|++.|+.+
T Consensus       252 i~~cl~~dP~~RPs~~el~~~L~~l  276 (483)
T 3sv0_A          252 FHYCRSLRFDDKPDYSYLKRLFRDL  276 (483)
T ss_dssp             HHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHhcCChhhCcCHHHHHHHHHHH
Confidence            9999999999999999999988776

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.51  E-value=5.6e-15  Score=98.49  Aligned_cols=91  Identities=25%  Similarity=0.342  Sum_probs=65.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+|++++++++ |..||...... .   .....         ..  ......+...+..+.+
T Consensus       184 ~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~-~---~~~~i---------~~--~~~~~~~~~~~~~l~~  248 (281)
T 1mp8_A          184 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-D---VIGRI---------EN--GERLPMPPNCPPTLYS  248 (281)
T ss_dssp             CCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-G---HHHHH---------HT--TCCCCCCTTCCHHHHH
T ss_pred             cChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH-H---HHHHH---------Hc--CCCCCCCCCCCHHHHH
Confidence            58898888889999999999999999996 88888643111 1   11100         00  0111223334567889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      ++.+||..+|.+||++.++++.|+.+.
T Consensus       249 li~~~l~~~p~~Rps~~~l~~~l~~~~  275 (281)
T 1mp8_A          249 LMTKCWAYDPSRRPRFTELKAQLSTIL  275 (281)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            999999999999999999999998764

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.51  E-value=2.6e-15  Score=101.39  Aligned_cols=92  Identities=24%  Similarity=0.303  Sum_probs=65.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhH--hHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVV--LLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (145)
                      +|||++.+..++.++||||||++++++++|..|+..........  .....         ....      .+...+..+.
T Consensus       189 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~---------~~~~------~~~~~~~~l~  253 (310)
T 3s95_A          189 MAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGF---------LDRY------CPPNCPPSFF  253 (310)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHH---------HHHT------CCTTCCTTHH
T ss_pred             eCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcc---------cccc------CCCCCCHHHH
Confidence            58999988889999999999999999999998876432211110  00000         0000      1222344688


Q ss_pred             HHHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           79 RVRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      +++.+||..+|.+||++.++++.|+.+..
T Consensus       254 ~li~~~l~~dP~~Rps~~~l~~~L~~l~~  282 (310)
T 3s95_A          254 PITVRCCDLDPEKRPSFVKLEHWLETLRM  282 (310)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            99999999999999999999999987754

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.51  E-value=9e-15  Score=99.83  Aligned_cols=93  Identities=22%  Similarity=0.333  Sum_probs=67.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++++++ |..|+... ...   .+...         +..  ....+.+...+..+.+
T Consensus       217 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~-~~~---~~~~~---------~~~--~~~~~~~~~~~~~l~~  281 (333)
T 1mqb_A          217 TAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL-SNH---EVMKA---------IND--GFRLPTPMDCPSAIYQ  281 (333)
T ss_dssp             SCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CHH---HHHHH---------HHT--TCCCCCCTTCBHHHHH
T ss_pred             cCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccC-CHH---HHHHH---------HHC--CCcCCCcccCCHHHHH
Confidence            58898888889999999999999999998 88888643 111   11100         000  0011222334566899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      ++.+||..+|.+||++.+++..|+.+...
T Consensus       282 li~~~l~~~p~~Rps~~~l~~~L~~~~~~  310 (333)
T 1mqb_A          282 LMMQCWQQERARRPKFADIVSILDKLIRA  310 (333)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            99999999999999999999999887653

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.51  E-value=2e-15  Score=102.87  Aligned_cols=108  Identities=14%  Similarity=0.136  Sum_probs=66.4

Q ss_pred             CCCccccc-------CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHh-HHH---------HHHHHHHHhHhhhhh
Q 032213            1 MSPEWQNS-------GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVL-LST---------WVYNCFIAKELNKLV   63 (145)
Q Consensus         1 ~aPe~~~~-------~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~-~~~---------~~~~~~~~~~~~~~~   63 (145)
                      +|||++.+       ..++.++||||||++++|+++|..|+........... +..         ..............+
T Consensus       195 ~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (336)
T 3g2f_A          195 MAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKF  274 (336)
T ss_dssp             CCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCC
T ss_pred             eCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCC
Confidence            57888765       3566789999999999999999877654322111000 000         000000000000001


Q ss_pred             CcchhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           64 GEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        64 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      .............+.+|+.+||..+|.+||++.++++.|+.+...
T Consensus       275 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~  319 (336)
T 3g2f_A          275 PEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI  319 (336)
T ss_dssp             CTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             CcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence            111112233566799999999999999999999999999987643

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.51  E-value=9.3e-15  Score=97.98  Aligned_cols=93  Identities=22%  Similarity=0.311  Sum_probs=65.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||.+.+..++.++|+||+|++++++++|..|+..............            .  ......+...+..+.++
T Consensus       195 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~------------~--~~~~~~~~~~~~~l~~l  260 (298)
T 3pls_A          195 TALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLA------------Q--GRRLPQPEYCPDSLYQV  260 (298)
T ss_dssp             SCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHH------------T--TCCCCCCTTCCHHHHHH
T ss_pred             cChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhh------------c--CCCCCCCccchHHHHHH
Confidence            478888888889999999999999999997666543322222111110            0  00111222334568999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      +.+||..+|.+||++.+++..|+.+..
T Consensus       261 i~~~l~~~p~~Rps~~~ll~~l~~~~~  287 (298)
T 3pls_A          261 MQQCWEADPAVRPTFRVLVGEVEQIVS  287 (298)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            999999999999999999999988654

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.51  E-value=8.3e-15  Score=98.56  Aligned_cols=87  Identities=15%  Similarity=0.184  Sum_probs=61.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..||............       .      .........+......+.++
T Consensus       183 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~-------~------~~~~~~~~~~~~~~~~~~~l  249 (297)
T 3fxz_A          183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI-------A------TNGTPELQNPEKLSAIFRDF  249 (297)
T ss_dssp             CCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-------H------HHCSCCCSCGGGSCHHHHHH
T ss_pred             cChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-------H------hCCCCCCCCccccCHHHHHH
Confidence            5899998888999999999999999999999998643111110000       0      00011112233345668899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..||.+||++.++++
T Consensus       250 i~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          250 LNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             HHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHccCChhHCcCHHHHhh
Confidence            99999999999999999975

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.50  E-value=6.8e-15  Score=99.38  Aligned_cols=93  Identities=27%  Similarity=0.350  Sum_probs=66.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+|++++++++ |..|+............            +...  .....+......+.+
T Consensus       217 ~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~------------~~~~--~~~~~~~~~~~~l~~  282 (316)
T 2xir_A          217 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR------------LKEG--TRMRAPDYTTPEMYQ  282 (316)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHH------------HHHT--CCCCCCTTCCHHHHH
T ss_pred             cCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHH------------hccC--ccCCCCCCCCHHHHH
Confidence            58998888889999999999999999998 88888643211111100            0000  001112223456889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++.+||..+|.+||++.++++.|+.+.+
T Consensus       283 li~~~l~~dp~~Rps~~ell~~L~~~~~  310 (316)
T 2xir_A          283 TMLDCWHGEPSQRPTFSELVEHLGNLLQ  310 (316)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            9999999999999999999999987653

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.50  E-value=2.1e-14  Score=97.79  Aligned_cols=105  Identities=21%  Similarity=0.208  Sum_probs=65.4

Q ss_pred             CCCcccccCCcccc------cchhhHHHHHHHHHhC----------CCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhC
Q 032213            1 MSPEWQNSGLITVK------SDVYSFGVVLLEIVCC----------RSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVG   64 (145)
Q Consensus         1 ~aPe~~~~~~~~~~------~dv~s~g~v~~el~~g----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   64 (145)
                      +|||++.+......      +||||||++++|+++|          ..|+..............   .............
T Consensus       213 ~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~  289 (337)
T 3mdy_A          213 MPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMR---EIVCIKKLRPSFP  289 (337)
T ss_dssp             CCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHH---HHHTTSCCCCCCC
T ss_pred             eChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhH---HHHhhhccCcccc
Confidence            58888876655554      8999999999999999          445443211111110000   0000000000000


Q ss_pred             cchhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHhhccCCCC
Q 032213           65 EDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIP  109 (145)
Q Consensus        65 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~~  109 (145)
                      . ..........+.+++.+||..+|.+||++.++++.|+.+.+..
T Consensus       290 ~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~  333 (337)
T 3mdy_A          290 N-RWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ  333 (337)
T ss_dssp             G-GGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             c-cchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence            0 0112356778999999999999999999999999999876543

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.50  E-value=6.1e-15  Score=99.54  Aligned_cols=92  Identities=32%  Similarity=0.385  Sum_probs=66.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+|++++++++ |..|+... .........            ..  ......+...+..+.+
T Consensus       219 ~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~-~~~~~~~~~------------~~--~~~~~~~~~~~~~~~~  283 (314)
T 2ivs_A          219 MAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI-PPERLFNLL------------KT--GHRMERPDNCSEEMYR  283 (314)
T ss_dssp             CCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC-CGGGHHHHH------------HT--TCCCCCCTTCCHHHHH
T ss_pred             cChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHh------------hc--CCcCCCCccCCHHHHH
Confidence            57888888888999999999999999999 88888643 111111100            00  0011122334567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++.+||..+|.+||++.++++.|+.+..
T Consensus       284 li~~~l~~dp~~Rps~~~l~~~l~~~~~  311 (314)
T 2ivs_A          284 LMLQCWKQEPDKRPVFADISKDLEKMMV  311 (314)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            9999999999999999999999987643

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.50  E-value=5.7e-15  Score=98.72  Aligned_cols=92  Identities=17%  Similarity=0.254  Sum_probs=67.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+|++++++++ |..|+..... ..   +....         ..  ......+...+..+.+
T Consensus       180 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-~~---~~~~i---------~~--~~~~~~~~~~~~~l~~  244 (287)
T 1u59_A          180 YAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-PE---VMAFI---------EQ--GKRMECPPECPPELYA  244 (287)
T ss_dssp             CCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT-HH---HHHHH---------HT--TCCCCCCTTCCHHHHH
T ss_pred             cCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH-HH---HHHHH---------hc--CCcCCCCCCcCHHHHH
Confidence            57888887788999999999999999998 9989864411 11   11100         00  0111223344567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++.+||..+|.+||++.++++.|+.+..
T Consensus       245 li~~~l~~~p~~Rps~~~l~~~l~~~~~  272 (287)
T 1u59_A          245 LMSDCWIYKWEDRPDFLTVEQRMRACYY  272 (287)
T ss_dssp             HHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            9999999999999999999999988754

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.50  E-value=6e-15  Score=102.44  Aligned_cols=93  Identities=25%  Similarity=0.316  Sum_probs=67.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++||||||++++++++ |..|+... ...   .+...         +...  .....+......+.+
T Consensus       260 ~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~-~~~---~~~~~---------~~~~--~~~~~~~~~~~~l~~  324 (382)
T 3tt0_A          260 MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVE---ELFKL---------LKEG--HRMDKPSNCTNELYM  324 (382)
T ss_dssp             SCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-CHH---HHHHH---------HHTT--CCCCCCSSCCHHHHH
T ss_pred             eCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-CHH---HHHHH---------HHcC--CCCCCCccCCHHHHH
Confidence            58999888889999999999999999998 88887643 111   11110         0000  011122233557899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      |+.+||..+|.+||++.+|++.|+.+...
T Consensus       325 li~~~l~~dP~~Rps~~ell~~L~~~~~~  353 (382)
T 3tt0_A          325 MMRDCWHAVPSQRPTFKQLVEDLDRIVAL  353 (382)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            99999999999999999999999987643

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.50  E-value=3.4e-14  Score=96.31  Aligned_cols=106  Identities=7%  Similarity=-0.014  Sum_probs=69.1

Q ss_pred             CCCcccc--------cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhh-----------
Q 032213            1 MSPEWQN--------SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNK-----------   61 (145)
Q Consensus         1 ~aPe~~~--------~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------   61 (145)
                      +|||++.        +..++.++|+||||++++|+++|..||........................+..           
T Consensus       182 ~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  261 (319)
T 4euu_A          182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDW  261 (319)
T ss_dssp             CCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEE
T ss_pred             cCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCcccc
Confidence            5788775        467889999999999999999999998754322222222221111110000000           


Q ss_pred             --hhCcchhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           62 --LVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        62 --~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                        .+.............+.+++.+||..||.+||++.++++..+...
T Consensus       262 ~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~  308 (319)
T 4euu_A          262 SGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL  308 (319)
T ss_dssp             ESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred             CccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence              000111234566778899999999999999999999999877544

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.50  E-value=1.1e-14  Score=105.86  Aligned_cols=88  Identities=16%  Similarity=0.070  Sum_probs=62.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..|+.++|+||+||+++||++|..||.....    ........    ..    ...............+.+|
T Consensus       323 ~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~----~~~~~~i~----~~----~~~~~~~~~~~~s~~~~dl  390 (573)
T 3uto_A          323 AAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND----DETLRNVK----SC----DWNMDDSAFSGISEDGKDF  390 (573)
T ss_dssp             CCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH----HHHHHHHH----TT----CCCCCSGGGTTSCHHHHHH
T ss_pred             cCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH----HHHHHHHH----hC----CCCCCcccccCCCHHHHHH
Confidence            799999999999999999999999999999999975411    11111000    00    0000111222335568899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..||.+||++.++++
T Consensus       391 i~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          391 IRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             HHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHccCChhHCcCHHHHhc
Confidence            99999999999999999986

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.50  E-value=9e-15  Score=98.67  Aligned_cols=93  Identities=20%  Similarity=0.309  Sum_probs=66.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+|++++++++ |..|+.............            .....  ...+...+..+.+
T Consensus       214 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~------------~~~~~--~~~~~~~~~~l~~  279 (313)
T 1t46_A          214 MAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI------------KEGFR--MLSPEHAPAEMYD  279 (313)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHH------------HHTCC--CCCCTTSCHHHHH
T ss_pred             eChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHh------------ccCCC--CCCcccCCHHHHH
Confidence            58898888889999999999999999998 888886442111111110            00000  0112223556899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++.+||..+|.+||++.++++.|+++..
T Consensus       280 li~~~l~~dp~~Rps~~ell~~L~~~~~  307 (313)
T 1t46_A          280 IMKTCWDADPLKRPTFKQIVQLIEKQIS  307 (313)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence            9999999999999999999999987653

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.50  E-value=2.2e-15  Score=100.65  Aligned_cols=91  Identities=19%  Similarity=0.330  Sum_probs=62.6

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+ ..++.++|+||+|++++++++|..++.............            .    .....+......+.+
T Consensus       184 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~------------~----~~~~~~~~~~~~l~~  247 (289)
T 4fvq_A          184 VPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY------------E----DRHQLPAPKAAELAN  247 (289)
T ss_dssp             SCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH------------H----TTCCCCCCSSCTTHH
T ss_pred             cCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHh------------h----ccCCCCCCCCHHHHH
Confidence            58998876 678999999999999999999665544321111110000            0    000011112345789


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++.+||+.+|.+||++.++++.|+.+..
T Consensus       248 li~~~l~~dp~~Rps~~~ll~~l~~l~~  275 (289)
T 4fvq_A          248 LINNCMDYEPDHRPSFRAIIRDLNSLFT  275 (289)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred             HHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            9999999999999999999999998876

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.49  E-value=1.2e-14  Score=98.21  Aligned_cols=92  Identities=24%  Similarity=0.374  Sum_probs=66.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++++++ |..|+... ....   +....        .   .......+...+..+.+
T Consensus       216 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-~~~~---~~~~~--------~---~~~~~~~~~~~~~~l~~  280 (313)
T 3brb_A          216 IAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGV-QNHE---MYDYL--------L---HGHRLKQPEDCLDELYE  280 (313)
T ss_dssp             SCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-CGGG---HHHHH--------H---TTCCCCCBTTCCHHHHH
T ss_pred             cCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccC-CHHH---HHHHH--------H---cCCCCCCCccccHHHHH
Confidence            47888888889999999999999999999 77777643 1111   11100        0   00111223334567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++.+||..+|.+||++.+++..|+.+..
T Consensus       281 li~~~l~~dp~~Rps~~~l~~~L~~l~~  308 (313)
T 3brb_A          281 IMYSCWRTDPLDRPTFSVLRLQLEKLLE  308 (313)
T ss_dssp             HHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            9999999999999999999999987653

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.49  E-value=7e-15  Score=100.15  Aligned_cols=92  Identities=22%  Similarity=0.296  Sum_probs=65.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++++++ |..|+.............            .....  ...+...+..+.+
T Consensus       233 ~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~------------~~~~~--~~~~~~~~~~l~~  298 (333)
T 2i1m_A          233 MAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV------------KDGYQ--MAQPAFAPKNIYS  298 (333)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHH------------HHTCC--CCCCTTCCHHHHH
T ss_pred             cCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHH------------hcCCC--CCCCCCCCHHHHH
Confidence            58998888889999999999999999998 888876432111111110            00000  0112223456889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      ++.+||..+|.+||++.++++.|+.+.
T Consensus       299 li~~~l~~~p~~Rps~~~l~~~L~~~~  325 (333)
T 2i1m_A          299 IMQACWALEPTHRPTFQQICSFLQEQA  325 (333)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHhccChhhCcCHHHHHHHHHHHH
Confidence            999999999999999999999988654

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.49  E-value=8.4e-15  Score=97.02  Aligned_cols=92  Identities=22%  Similarity=0.267  Sum_probs=65.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+|++++++++ |..|+... ...   .....         +...  .....+......+.+
T Consensus       174 ~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~-~~~---~~~~~---------~~~~--~~~~~~~~~~~~~~~  238 (269)
T 4hcu_A          174 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR-SNS---EVVED---------ISTG--FRLYKPRLASTHVYQ  238 (269)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CHH---HHHHH---------HHTT--CCCCCCTTSCHHHHH
T ss_pred             CCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCC-CHH---HHHHH---------HhcC--ccCCCCCcCCHHHHH
Confidence            58998888889999999999999999999 88887643 111   11110         0000  011112223456889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++.+||..+|.+||++.++++.|+.+.+
T Consensus       239 li~~~l~~~p~~Rps~~~ll~~l~~l~~  266 (269)
T 4hcu_A          239 IMNHCWRERPEDRPAFSRLLRQLAEIAE  266 (269)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence            9999999999999999999999987643

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.49  E-value=9.9e-15  Score=97.10  Aligned_cols=91  Identities=25%  Similarity=0.313  Sum_probs=65.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+|++++++++ |..|+... ....   ....         +..  ......+...+..+.+
T Consensus       181 ~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~-~~~~---~~~~---------~~~--~~~~~~~~~~~~~l~~  245 (278)
T 1byg_A          181 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKD---VVPR---------VEK--GYKMDAPDGCPPAVYE  245 (278)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS-CGGG---HHHH---------HTT--TCCCCCCTTCCHHHHH
T ss_pred             cCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCC-CHHH---HHHH---------Hhc--CCCCCCcccCCHHHHH
Confidence            58898888889999999999999999998 88887643 1111   1100         000  0011122334567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      ++.+||..+|.+||++.++++.|+.+.
T Consensus       246 li~~~l~~~p~~Rps~~~l~~~L~~i~  272 (278)
T 1byg_A          246 VMKNCWHLDAAMRPSFLQLREQLEHIK  272 (278)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence            999999999999999999999998764

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.49  E-value=3e-14  Score=98.94  Aligned_cols=100  Identities=12%  Similarity=0.038  Sum_probs=64.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchh--hHhHHHHHHHHHHH--------hHhh----------
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTAD--VVLLSTWVYNCFIA--------KELN----------   60 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~--------~~~~----------   60 (145)
                      +|||++.+..++.++||||||+++++|++|..||........  ..............        ....          
T Consensus       260 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  339 (397)
T 1wak_A          260 RSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDL  339 (397)
T ss_dssp             CCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSB
T ss_pred             cCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccc
Confidence            689999888899999999999999999999999875422111  11111111100000        0000          


Q ss_pred             ------------hhhCcchhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           61 ------------KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        61 ------------~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                                  ..+......+......+.+|+.+||..||.+||++.++++
T Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          340 KHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             SSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             ccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence                        0000011234556778999999999999999999999975

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.49  E-value=1.8e-15  Score=102.96  Aligned_cols=107  Identities=21%  Similarity=0.248  Sum_probs=66.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhh--CcchhhcHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLV--GEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~   78 (145)
                      +|||++.+..++.++|+||+|++++++++|..|+...  ...................+...+  ......+...+..+.
T Consensus       197 ~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (327)
T 3lxl_A          197 YAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSP--SAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVH  274 (327)
T ss_dssp             SCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSH--HHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHH
T ss_pred             cCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccc--cchhhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHH
Confidence            5788888888899999999999999999999887632  100000000000000000000000  011122334456789


Q ss_pred             HHHHhcccCCCCCCCCHHHHHHHhhccCCCC
Q 032213           79 RVRLLCIQDEPNLRPSMKNVILMLEGTMEIP  109 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~~  109 (145)
                      +++.+||..+|.+||++.++++.|+.+....
T Consensus       275 ~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  305 (327)
T 3lxl_A          275 ELMKLCWAPSPQDRPSFSALGPQLDMLWSGS  305 (327)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence            9999999999999999999999999876543

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.49  E-value=1.5e-14  Score=99.38  Aligned_cols=103  Identities=14%  Similarity=0.090  Sum_probs=67.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||||++++++++|..||........  .+........  .....+.... ......+..+.++
T Consensus       235 ~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~l~~l  309 (352)
T 2jii_A          235 ISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTE--DIMKQKQKFV--DKPGPFVGPC-GHWIRPSETLQKY  309 (352)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH--HHHHHHHHHH--HSCCCEECTT-SCEECCCHHHHHH
T ss_pred             cCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHH--HHHHHHHhcc--CChhhhhhhc-cccCCCcHHHHHH
Confidence            578988888899999999999999999999999875421111  1111100000  0000010000 0001124568999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      +.+||..+|.+||++.++++.|+.+...
T Consensus       310 i~~~l~~dp~~Rps~~~l~~~L~~~~~~  337 (352)
T 2jii_A          310 LKVVMALTYEEKPPYAMLRNNLEALLQD  337 (352)
T ss_dssp             HHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHhCChhhCCCHHHHHHHHHHHHHh
Confidence            9999999999999999999999887643

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.49  E-value=5.9e-15  Score=98.61  Aligned_cols=94  Identities=19%  Similarity=0.218  Sum_probs=66.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+|++++++++ |..|+.... .   ......         +.. .....+.+...+..+.+
T Consensus       191 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-~---~~~~~~---------~~~-~~~~~~~~~~~~~~l~~  256 (291)
T 1u46_A          191 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN-G---SQILHK---------IDK-EGERLPRPEDCPQDIYN  256 (291)
T ss_dssp             CCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC-H---HHHHHH---------HHT-SCCCCCCCTTCCHHHHH
T ss_pred             eCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCC-H---HHHHHH---------HHc-cCCCCCCCcCcCHHHHH
Confidence            57888887788999999999999999999 888886431 1   111100         000 00111122334567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      ++.+||..+|.+||++.++++.|+++...
T Consensus       257 li~~~l~~~p~~Rps~~~l~~~l~~~~~~  285 (291)
T 1u46_A          257 VMVQCWAHKPEDRPTFVALRDFLLEAQPT  285 (291)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred             HHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence            99999999999999999999999987653

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.48  E-value=1.5e-14  Score=100.94  Aligned_cols=99  Identities=17%  Similarity=0.098  Sum_probs=60.9

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHh-----------HhhhhhCcchh
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAK-----------ELNKLVGEDEE   68 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~   68 (145)
                      ||||++.+. .++.++||||+||+++||++|..||... ........+..........           .....+....+
T Consensus       229 ~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~-~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~  307 (398)
T 4b99_A          229 RAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK-NYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQP  307 (398)
T ss_dssp             CCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS-SHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCC
T ss_pred             cCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC-CHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCC
Confidence            799998764 5689999999999999999999999754 1111111111000000000           00000011111


Q ss_pred             hc-----HHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           69 VD-----LRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        69 ~~-----~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+     ......+.+|+.+||..||.+|||+.++++
T Consensus       308 ~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          308 VPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             CCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            11     122456789999999999999999999976

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.48  E-value=1.7e-14  Score=97.78  Aligned_cols=92  Identities=32%  Similarity=0.480  Sum_probs=66.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+|++++++++ |..|+... ...   ......    ..       ......+...+..+.+
T Consensus       207 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-~~~---~~~~~~----~~-------~~~~~~~~~~~~~l~~  271 (322)
T 1p4o_A          207 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL-SNE---QVLRFV----ME-------GGLLDKPDNCPDMLFE  271 (322)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-CHH---HHHHHH----HT-------TCCCCCCTTCCHHHHH
T ss_pred             cChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC-CHH---HHHHHH----Hc-------CCcCCCCCCCCHHHHH
Confidence            58998888889999999999999999999 77777643 111   111000    00       0001122234556889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++.+||..+|.+||++.+++..|+.+..
T Consensus       272 li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          272 LMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             HHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence            9999999999999999999999998755

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.48  E-value=1.2e-14  Score=95.95  Aligned_cols=92  Identities=22%  Similarity=0.273  Sum_probs=65.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+|++++++++ |..|+... ..   ......         +....  ....+......+.+
T Consensus       172 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-~~---~~~~~~---------i~~~~--~~~~~~~~~~~l~~  236 (267)
T 3t9t_A          172 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR-SN---SEVVED---------ISTGF--RLYKPRLASTHVYQ  236 (267)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CH---HHHHHH---------HHTTC--CCCCCTTSCHHHHH
T ss_pred             cChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCC-CH---HHHHHH---------HhcCC--cCCCCccCcHHHHH
Confidence            57898887888999999999999999999 78887643 11   111110         00000  01112223456889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++.+||..+|.+||++.++++.|+.+.+
T Consensus       237 li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          237 IMNHCWRERPEDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            9999999999999999999999987643

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.47  E-value=1.6e-14  Score=96.98  Aligned_cols=93  Identities=25%  Similarity=0.357  Sum_probs=64.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCC-CCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRS-NFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||.+.+..++.++|+||+|++++++++|.. |+... .........           .   .......+...+..+.+
T Consensus       199 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-~~~~~~~~~-----------~---~~~~~~~~~~~~~~l~~  263 (298)
T 3f66_A          199 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYL-----------L---QGRRLLQPEYCPDPLYE  263 (298)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTS-CTTTHHHHH-----------H---TTCCCCCCTTCCHHHHH
T ss_pred             cChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccC-CHHHHHHHH-----------h---cCCCCCCCccCCHHHHH
Confidence            57888888889999999999999999999555 44322 111111100           0   00011112223456899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      ++.+||..+|.+||++.++++.|+.+...
T Consensus       264 li~~~l~~~p~~Rps~~ell~~L~~~~~~  292 (298)
T 3f66_A          264 VMLKCWHPKAEMRPSFSELVSRISAIFST  292 (298)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            99999999999999999999999887543

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.47  E-value=2.8e-14  Score=96.96  Aligned_cols=88  Identities=14%  Similarity=0.203  Sum_probs=62.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||||++++++++|..|+..... .   .....         +.....+...........+.++
T Consensus       208 ~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~-~---~~~~~---------~~~~~~~~~~~~~~~~~~l~~l  274 (321)
T 2c30_A          208 MAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP-V---QAMKR---------LRDSPPPKLKNSHKVSPVLRDF  274 (321)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-H---HHHHH---------HHHSSCCCCTTGGGSCHHHHHH
T ss_pred             cCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-H---HHHHH---------HhcCCCCCcCccccCCHHHHHH
Confidence            589999888899999999999999999999999864311 1   11100         1111111111122234568899


Q ss_pred             HHhcccCCCCCCCCHHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      +.+||..+|.+||++.++++.
T Consensus       275 i~~~l~~dp~~Rps~~ell~h  295 (321)
T 2c30_A          275 LERMLVRDPQERATAQELLDH  295 (321)
T ss_dssp             HHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHHccCChhhCcCHHHHhcC
Confidence            999999999999999999863

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.47  E-value=1.1e-14  Score=99.26  Aligned_cols=92  Identities=23%  Similarity=0.299  Sum_probs=66.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+|++++++++ |..|+... ...   .+....         ...  .....+......+.+
T Consensus       226 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~-~~~---~~~~~~---------~~~--~~~~~~~~~~~~l~~  290 (334)
T 2pvf_A          226 MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVE---ELFKLL---------KEG--HRMDKPANCTNELYM  290 (334)
T ss_dssp             CCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC-CHH---HHHHHH---------HHT--CCCCCCTTCCHHHHH
T ss_pred             eChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC-CHH---HHHHHH---------hcC--CCCCCCccCCHHHHH
Confidence            57888887888999999999999999999 88887643 111   111100         000  011122233556899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++.+||..+|.+||++.+++..|+.+..
T Consensus       291 li~~~l~~dp~~Rps~~ell~~L~~l~~  318 (334)
T 2pvf_A          291 MMRDCWHAVPSQRPTFKQLVEDLDRILT  318 (334)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            9999999999999999999999998764

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.47  E-value=1.6e-14  Score=96.29  Aligned_cols=92  Identities=18%  Similarity=0.281  Sum_probs=65.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+|++++++++ |..|+..... .   ....         .+....  ....+......+.+
T Consensus       188 ~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~-~---~~~~---------~~~~~~--~~~~~~~~~~~l~~  252 (283)
T 3gen_A          188 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN-S---ETAE---------HIAQGL--RLYRPHLASEKVYT  252 (283)
T ss_dssp             CCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH-H---HHHH---------HHHTTC--CCCCCTTCCHHHHH
T ss_pred             CCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh-h---HHHH---------HHhccc--CCCCCCcCCHHHHH
Confidence            58898888889999999999999999998 8888864411 1   1110         000000  01112222456889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++.+||..+|.+||++.+++..|..+..
T Consensus       253 li~~~l~~~p~~Rps~~~ll~~L~~~~~  280 (283)
T 3gen_A          253 IMYSCWHEKADERPTFKILLSNILDVMD  280 (283)
T ss_dssp             HHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence            9999999999999999999999987653

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.47  E-value=1.7e-14  Score=98.13  Aligned_cols=93  Identities=26%  Similarity=0.373  Sum_probs=66.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||||++++++++ |..|+... ...   ......         ..  ......+...+..+.+
T Consensus       212 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~-~~~---~~~~~~---------~~--~~~~~~~~~~~~~l~~  276 (327)
T 2yfx_A          212 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-SNQ---EVLEFV---------TS--GGRMDPPKNCPGPVYR  276 (327)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-CHH---HHHHHH---------HT--TCCCCCCTTCCHHHHH
T ss_pred             eCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc-CHH---HHHHHH---------hc--CCCCCCCCCCCHHHHH
Confidence            58898888889999999999999999998 88887643 111   111100         00  0011112233456889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      ++.+||..+|.+||++.++++.|+.+...
T Consensus       277 li~~~l~~dp~~Rps~~~ll~~l~~~~~~  305 (327)
T 2yfx_A          277 IMTQCWQHQPEDRPNFAIILERIEYCTQD  305 (327)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence            99999999999999999999999877653

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.46  E-value=4.1e-14  Score=95.00  Aligned_cols=98  Identities=18%  Similarity=0.241  Sum_probs=68.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCc-chhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGE-DEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   79 (145)
                      +|||.+.+..++.++|+||+|++++++++|..||........   ..         ..+...... ........+..+.+
T Consensus       179 ~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~---~~---------~~~~~~~~~~~~~~~~~~~~~l~~  246 (294)
T 4eqm_A          179 FSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI---AI---------KHIQDSVPNVTTDVRKDIPQSLSN  246 (294)
T ss_dssp             CCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH---HH---------HHHSSCCCCHHHHSCTTSCHHHHH
T ss_pred             cCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH---HH---------HHhhccCCCcchhcccCCCHHHHH
Confidence            589998888889999999999999999999999875311000   00         000000000 01112233567899


Q ss_pred             HHHhcccCCCCCCC-CHHHHHHHhhccCCCCC
Q 032213           80 VRLLCIQDEPNLRP-SMKNVILMLEGTMEIPV  110 (145)
Q Consensus        80 l~~~cl~~~p~~Rp-t~~~v~~~L~~~~~~~~  110 (145)
                      ++.+||..+|.+|| ++.++...|..+.....
T Consensus       247 li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~  278 (294)
T 4eqm_A          247 VILRATEKDKANRYKTIQEMKDDLSSVLHENR  278 (294)
T ss_dssp             HHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred             HHHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence            99999999999998 89999999998776543

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.46  E-value=7.7e-14  Score=94.25  Aligned_cols=96  Identities=15%  Similarity=0.227  Sum_probs=64.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+|+||++++++++|..||...  .  ...+..         .+..........+...+..+.++
T Consensus       202 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~--~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~l  268 (309)
T 2h34_A          202 MAPERFSESHATYRADIYALTCVLYECLTGSPPYQGD--Q--LSVMGA---------HINQAIPRPSTVRPGIPVAFDAV  268 (309)
T ss_dssp             CCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSC--H--HHHHHH---------HHHSCCCCGGGTSTTCCTHHHHH
T ss_pred             cCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCc--h--HHHHHH---------HhccCCCCccccCCCCCHHHHHH
Confidence            5899998888899999999999999999999998643  1  001100         01111111111223345568899


Q ss_pred             HHhcccCCCCCCC-CHHHHHHHhhccCCCC
Q 032213           81 RLLCIQDEPNLRP-SMKNVILMLEGTMEIP  109 (145)
Q Consensus        81 ~~~cl~~~p~~Rp-t~~~v~~~L~~~~~~~  109 (145)
                      +.+||..+|.+|| ++.+++..|+......
T Consensus       269 i~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~  298 (309)
T 2h34_A          269 IARGMAKNPEDRYVTCGDLSAAAHAALATA  298 (309)
T ss_dssp             HHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred             HHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence            9999999999999 9999999999876543

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.46  E-value=2.5e-15  Score=101.03  Aligned_cols=101  Identities=24%  Similarity=0.305  Sum_probs=65.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHH---HHHhHh-hhhh-CcchhhcHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNC---FIAKEL-NKLV-GEDEEVDLRTLE   75 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~-~~~~~~~~~~~~   75 (145)
                      +|||++.+..++.++|+||+|++++++++|..|+...  ..   .........   .....+ ..+. ......+...+.
T Consensus       196 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (302)
T 4e5w_A          196 YAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSP--MA---LFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPD  270 (302)
T ss_dssp             CCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSH--HH---HHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCH
T ss_pred             cCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcch--hh---HHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCH
Confidence            5788888888889999999999999999998875421  00   000000000   000000 0000 111122334456


Q ss_pred             HHHHHHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           76 TMVRVRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        76 ~~~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      .+.+|+.+||..+|.+||++.++++.|+.+.
T Consensus       271 ~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          271 EVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            7899999999999999999999999998764

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.46  E-value=5.6e-14  Score=95.04  Aligned_cols=96  Identities=17%  Similarity=0.240  Sum_probs=65.0

Q ss_pred             CCCcccccCC---cccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHH
Q 032213            1 MSPEWQNSGL---ITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~~~~---~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (145)
                      +|||++.+..   ++.++|+||||++++++++|..|+.........  ....         ...  ....+.+...+..+
T Consensus       210 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~--~~~~---------~~~--~~~~~~~~~~~~~l  276 (317)
T 2buj_A          210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS--VALA---------VQN--QLSIPQSPRHSSAL  276 (317)
T ss_dssp             CCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSC--HHHH---------HHC--C--CCCCTTSCHHH
T ss_pred             CCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccch--hhHH---------hhc--cCCCCccccCCHHH
Confidence            5899886443   688999999999999999999987531000000  0000         000  00011122234568


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHHHhhccCCCC
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVILMLEGTMEIP  109 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~~  109 (145)
                      .+++.+||..+|.+||++.+++..|+.+....
T Consensus       277 ~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  308 (317)
T 2buj_A          277 WQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA  308 (317)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred             HHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence            99999999999999999999999999876543

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.46  E-value=2e-14  Score=97.77  Aligned_cols=94  Identities=27%  Similarity=0.328  Sum_probs=67.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+|++++++++ |..|+.... .   ..+..         .+...  .....+......+.+
T Consensus       208 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~-~---~~~~~---------~~~~~--~~~~~~~~~~~~l~~  272 (327)
T 1fvr_A          208 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-C---AELYE---------KLPQG--YRLEKPLNCDDEVYD  272 (327)
T ss_dssp             CCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-H---HHHHH---------HGGGT--CCCCCCTTBCHHHHH
T ss_pred             cChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCc-H---HHHHH---------HhhcC--CCCCCCCCCCHHHHH
Confidence            57888887888999999999999999998 998886431 1   11110         00000  011122233556899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEIP  109 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~~  109 (145)
                      ++.+||..+|.+||++.+++..|+.+....
T Consensus       273 li~~~l~~dp~~Rps~~ell~~L~~~~~~~  302 (327)
T 1fvr_A          273 LMRQCWREKPYERPSFAQILVSLNRMLEER  302 (327)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence            999999999999999999999999876544

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.46  E-value=2.8e-14  Score=95.25  Aligned_cols=92  Identities=26%  Similarity=0.289  Sum_probs=66.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+|++++++++ |..|+.... ...   ....         +...  .....+...+..+.+
T Consensus       179 ~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~-~~~---~~~~---------~~~~--~~~~~~~~~~~~l~~  243 (288)
T 3kfa_A          179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQ---VYEL---------LEKD--YRMERPEGCPEKVYE  243 (288)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-GGG---HHHH---------HHTT--CCCCCCTTCCHHHHH
T ss_pred             CChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-HHH---HHHH---------Hhcc--CCCCCCCCCCHHHHH
Confidence            58898888889999999999999999999 888876431 111   1110         0000  011122333567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++.+||..+|.+||++.++++.|+.+..
T Consensus       244 li~~~l~~dp~~Rps~~~~~~~l~~~~~  271 (288)
T 3kfa_A          244 LMRACWQWNPSDRPSFAEIHQAFETMFQ  271 (288)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence            9999999999999999999999887643

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.45  E-value=2e-14  Score=95.66  Aligned_cols=92  Identities=28%  Similarity=0.356  Sum_probs=65.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+|++++++++ |..|+.... .   ......         +...  .....+...+..+.+
T Consensus       177 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-~---~~~~~~---------~~~~--~~~~~~~~~~~~l~~  241 (279)
T 1qpc_A          177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-N---PEVIQN---------LERG--YRMVRPDNCPEELYQ  241 (279)
T ss_dssp             SCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC-H---HHHHHH---------HHTT--CCCCCCTTCCHHHHH
T ss_pred             cChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC-H---HHHHHH---------Hhcc--cCCCCcccccHHHHH
Confidence            57888887888999999999999999999 888876431 1   111110         0000  011112233567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      ++.+||..+|.+||++.+++..|+.+..
T Consensus       242 li~~~l~~~p~~Rps~~~l~~~l~~~~~  269 (279)
T 1qpc_A          242 LMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (279)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence            9999999999999999999999987653

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.45  E-value=7e-14  Score=95.74  Aligned_cols=84  Identities=19%  Similarity=0.219  Sum_probs=61.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++||++|..||.... .   ..+...            +.......+......+.+|
T Consensus       172 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-~---~~~~~~------------i~~~~~~~p~~~s~~~~~l  235 (337)
T 1o6l_A          172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-H---ERLFEL------------ILMEEIRFPRTLSPEAKSL  235 (337)
T ss_dssp             CCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS-H---HHHHHH------------HHHCCCCCCTTSCHHHHHH
T ss_pred             CChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC-H---HHHHHH------------HHcCCCCCCCCCCHHHHHH
Confidence            68999988889999999999999999999999987431 1   111110            1111112233345678999


Q ss_pred             HHhcccCCCCCCC-----CHHHHHH
Q 032213           81 RLLCIQDEPNLRP-----SMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rp-----t~~~v~~  100 (145)
                      +.+||..+|.+||     ++.+++.
T Consensus       236 i~~lL~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          236 LAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHHhhcCHHHhcCCCCCCHHHHHc
Confidence            9999999999999     8999875

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.45  E-value=2.5e-14  Score=97.63  Aligned_cols=84  Identities=15%  Similarity=0.193  Sum_probs=60.0

Q ss_pred             CCCcccccCCcc-cccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLIT-VKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~-~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..+. .++|+||+|++++++++|..||....    ...+...            +.......|...+..+.+
T Consensus       180 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~----~~~~~~~------------i~~~~~~~p~~~s~~~~~  243 (328)
T 3fe3_A          180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN----LKELRER------------VLRGKYRIPFYMSTDCEN  243 (328)
T ss_dssp             CCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHH------------HHHCCCCCCTTSCHHHHH
T ss_pred             eCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC----HHHHHHH------------HHhCCCCCCCCCCHHHHH
Confidence            589988877664 78999999999999999999987541    1111110            111111122233556889


Q ss_pred             HHHhcccCCCCCCCCHHHHHH
Q 032213           80 VRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      |+.+||..||.+|||+.++++
T Consensus       244 li~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          244 LLKRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             HHHHHCCSSTTTSCCHHHHTT
T ss_pred             HHHHHCCCChhHCcCHHHHhc
Confidence            999999999999999999976

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.45  E-value=3.6e-14  Score=94.43  Aligned_cols=84  Identities=19%  Similarity=0.262  Sum_probs=60.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||.+.+..++.++|+|++|++++++++|..|+... ...   .....            +.......+......+.+|
T Consensus       174 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-~~~---~~~~~------------~~~~~~~~~~~~~~~~~~l  237 (279)
T 3fdn_A          174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-TYQ---ETYKR------------ISRVEFTFPDFVTEGARDL  237 (279)
T ss_dssp             CCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCS-SHH---HHHHH------------HHHTCCCCCTTSCHHHHHH
T ss_pred             cCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCC-cHH---HHHHH------------HHhCCCCCCCcCCHHHHHH
Confidence            5889888888899999999999999999999998643 111   11000            0001111222234568899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.++++
T Consensus       238 i~~~l~~~p~~Rps~~e~l~  257 (279)
T 3fdn_A          238 ISRLLKHNPSQRPMLREVLE  257 (279)
T ss_dssp             HHHHCCSSGGGSCCHHHHHH
T ss_pred             HHHHhccChhhCCCHHHHhh
Confidence            99999999999999999987

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.45  E-value=2.6e-14  Score=98.36  Aligned_cols=37  Identities=32%  Similarity=0.340  Sum_probs=34.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCC
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVN   37 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~   37 (145)
                      +|||++.+..++.++||||+|++++++++|..||...
T Consensus       226 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  262 (360)
T 3llt_A          226 RAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH  262 (360)
T ss_dssp             CCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             cCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence            6899999888999999999999999999999998754

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.45  E-value=7.5e-14  Score=97.60  Aligned_cols=93  Identities=16%  Similarity=0.156  Sum_probs=62.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++||||||+++++|++|..||.................    ...    ..............+.+|
T Consensus       230 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~----~~~----~~~~~~~~~~~s~~~~~l  301 (400)
T 1nxk_A          230 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR----MGQ----YEFPNPEWSEVSEEVKML  301 (400)
T ss_dssp             CCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH----HTC----CCCCTTTTTTSCHHHHHH
T ss_pred             cCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH----cCc----ccCCCcccccCCHHHHHH
Confidence            689999888999999999999999999999999875422111000110000    000    000001112235568999


Q ss_pred             HHhcccCCCCCCCCHHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      +.+||..||.+||++.+++..
T Consensus       302 i~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          302 IRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             HHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHCCCChhHCcCHHHHhcC
Confidence            999999999999999999873

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.44  E-value=1.3e-13  Score=95.64  Aligned_cols=37  Identities=24%  Similarity=0.282  Sum_probs=34.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCC
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVN   37 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~   37 (145)
                      +|||++.+..++.++||||||++++|+++|..||...
T Consensus       225 ~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  261 (382)
T 2vx3_A          225 RSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA  261 (382)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             cChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            6899998888999999999999999999999998754

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.44  E-value=4e-14  Score=95.79  Aligned_cols=95  Identities=17%  Similarity=0.243  Sum_probs=62.4

Q ss_pred             CCCccccc---------CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcH
Q 032213            1 MSPEWQNS---------GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDL   71 (145)
Q Consensus         1 ~aPe~~~~---------~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (145)
                      +|||++.+         ..++.++|+||||++++++++|..|+... ...   .....         +.....+.. ...
T Consensus       201 ~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~-~~~---~~~~~---------~~~~~~~~~-~~~  266 (319)
T 2y4i_B          201 LAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ-PAE---AIIWQ---------MGTGMKPNL-SQI  266 (319)
T ss_dssp             SCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC-CHH---HHHHH---------HHTTCCCCC-CCS
T ss_pred             cChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHH---HHHHH---------hccCCCCCC-CcC
Confidence            47787753         34788999999999999999999998643 111   11000         000000100 011


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCCHHHHHHHhhccCCCC
Q 032213           72 RTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIP  109 (145)
Q Consensus        72 ~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~~  109 (145)
                      ..+..+.+++.+||..+|.+||++.++++.|+.+....
T Consensus       267 ~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~  304 (319)
T 2y4i_B          267 GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN  304 (319)
T ss_dssp             SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred             CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence            12345889999999999999999999999999887653

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.44  E-value=2.8e-14  Score=94.83  Aligned_cols=89  Identities=20%  Similarity=0.215  Sum_probs=62.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..|+.... .   ..+....    ....    .   ...+...+..+.++
T Consensus       183 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-~---~~~~~~i----~~~~----~---~~~~~~~~~~l~~l  247 (279)
T 2w5a_A          183 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS-Q---KELAGKI----REGK----F---RRIPYRYSDELNEI  247 (279)
T ss_dssp             CCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS-H---HHHHHHH----HHTC----C---CCCCTTSCHHHHHH
T ss_pred             cChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC-H---HHHHHHH----hhcc----c---ccCCcccCHHHHHH
Confidence            58999888889999999999999999999999987541 1   1111110    0000    0   01122335568999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhc
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEG  104 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~  104 (145)
                      +.+||..+|.+||++.+++..+..
T Consensus       248 i~~~l~~~p~~Rps~~~ll~~~~~  271 (279)
T 2w5a_A          248 ITRMLNLKDYHRPSVEEILENPLI  271 (279)
T ss_dssp             HHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             HHHHcCCCcccCCCHHHHHhChhh
Confidence            999999999999999999876654

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.44  E-value=4.7e-14  Score=96.06  Aligned_cols=88  Identities=16%  Similarity=0.141  Sum_probs=61.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..||.... ..   ........    .    ............+..+.+|
T Consensus       184 ~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~---~~~~~~~~----~----~~~~~~~~~~~~~~~~~~l  251 (326)
T 2y0a_A          184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-KQ---ETLANVSA----V----NYEFEDEYFSNTSALAKDF  251 (326)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-HH---HHHHHHHH----T----CCCCCHHHHTTSCHHHHHH
T ss_pred             CCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC-HH---HHHHHHHh----c----CCCcCccccccCCHHHHHH
Confidence            68999988889999999999999999999999986431 11   11100000    0    0000001112234568899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.+++.
T Consensus       252 i~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          252 IRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             HHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHccCChhhCCCHHHHhc
Confidence            99999999999999999986

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.44  E-value=4.7e-14  Score=94.08  Aligned_cols=84  Identities=17%  Similarity=0.177  Sum_probs=61.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+|++|++++++++|..|+.....    ....            ..+.......+......+.++
T Consensus       179 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~------------~~~~~~~~~~~~~~~~~~~~l  242 (284)
T 2vgo_A          179 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH----TETH------------RRIVNVDLKFPPFLSDGSKDL  242 (284)
T ss_dssp             CCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH----HHHH------------HHHHTTCCCCCTTSCHHHHHH
T ss_pred             CCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH----hHHH------------HHHhccccCCCCcCCHHHHHH
Confidence            589988888889999999999999999999999864311    0100            001111112223335568899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.+++.
T Consensus       243 i~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          243 ISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             HHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHhhcCHhhCCCHHHHhh
Confidence            99999999999999999986

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.44  E-value=3.3e-14  Score=95.94  Aligned_cols=95  Identities=22%  Similarity=0.281  Sum_probs=65.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+|+||++++++++|..|+.....  ....+...         +.....+. ......+..+.++
T Consensus       203 ~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~---------~~~~~~~~-~~~~~~~~~l~~l  270 (310)
T 2wqm_A          203 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM--NLYSLCKK---------IEQCDYPP-LPSDHYSEELRQL  270 (310)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C--CHHHHHHH---------HHTTCSCC-CCTTTSCHHHHHH
T ss_pred             eChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch--hHHHHHHH---------hhcccCCC-CcccccCHHHHHH
Confidence            588988888899999999999999999999999864311  11111110         00000000 0011234568899


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      +.+||..||.+||++.++++.|+.+..
T Consensus       271 i~~~l~~dp~~Rps~~~il~~l~~l~~  297 (310)
T 2wqm_A          271 VNMCINPDPEKRPDVTYVYDVAKRMHA  297 (310)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence            999999999999999999999988754

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.43  E-value=5.6e-14  Score=97.70  Aligned_cols=106  Identities=20%  Similarity=0.238  Sum_probs=61.7

Q ss_pred             CCCccccc--CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHH-H-----H-------------hHh
Q 032213            1 MSPEWQNS--GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCF-I-----A-------------KEL   59 (145)
Q Consensus         1 ~aPe~~~~--~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~-~-----~-------------~~~   59 (145)
                      +|||++.+  ..++.++|+||+|++++++++|..||.................... .     .             ..+
T Consensus       202 ~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (389)
T 3gni_B          202 LSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGL  281 (389)
T ss_dssp             SCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------------------------------
T ss_pred             cCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccccccccccccccccccccccc
Confidence            58998876  5789999999999999999999999875422211111110000000 0     0             000


Q ss_pred             hhhh-----------CcchhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH--hhccC
Q 032213           60 NKLV-----------GEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILM--LEGTM  106 (145)
Q Consensus        60 ~~~~-----------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~--L~~~~  106 (145)
                      ....           ....+.+......+.+|+.+||..||.+||++.++++.  ++.+.
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~  341 (389)
T 3gni_B          282 SDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK  341 (389)
T ss_dssp             ------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred             ccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHh
Confidence            0000           00001222335668999999999999999999999863  54443

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.43  E-value=3.6e-14  Score=104.75  Aligned_cols=91  Identities=24%  Similarity=0.299  Sum_probs=66.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++.+..++.++|+||||++++|+++ |..||... ...   .......         .  ......+...+..+.+
T Consensus       559 ~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~-~~~---~~~~~i~---------~--~~~~~~~~~~~~~l~~  623 (656)
T 2j0j_A          559 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV-KNN---DVIGRIE---------N--GERLPMPPNCPPTLYS  623 (656)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CHH---HHHHHHH---------H--TCCCCCCTTCCHHHHH
T ss_pred             eCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCC-CHH---HHHHHHH---------c--CCCCCCCccccHHHHH
Confidence            68999988889999999999999999997 88888643 111   1111100         0  0111223334567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      ++.+||..+|.+||++.++++.|+.+.
T Consensus       624 li~~~l~~dP~~RPs~~el~~~L~~il  650 (656)
T 2j0j_A          624 LMTKCWAYDPSRRPRFTELKAQLSTIL  650 (656)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            999999999999999999999998764

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.43  E-value=7.3e-14  Score=95.98  Aligned_cols=89  Identities=11%  Similarity=0.019  Sum_probs=61.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||||++++++++|..|+.......   .+...    ....    ......+........+.+|
T Consensus       217 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~~----i~~~----~~~~~~~~~~~~~~~~~~l  285 (349)
T 2w4o_A          217 CAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ---FMFRR----ILNC----EYYFISPWWDEVSLNAKDL  285 (349)
T ss_dssp             SCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH---HHHHH----HHTT----CCCCCTTTTTTSCHHHHHH
T ss_pred             cCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH---HHHHH----HHhC----CCccCCchhhhCCHHHHHH
Confidence            58999988889999999999999999999999986431111   01100    0000    0000001112335568899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..||.+||++.++++
T Consensus       286 i~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          286 VRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             HHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHccCChhhCcCHHHHhc
Confidence            99999999999999999976

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.43  E-value=8.2e-14  Score=98.63  Aligned_cols=88  Identities=14%  Similarity=0.023  Sum_probs=61.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++||||+|++++++++|..||....    ...+....    ...    ......+.....+..+.+|
T Consensus       180 ~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~----~~~~~~~i----~~~----~~~~~~~~~~~~s~~~~~l  247 (444)
T 3soa_A          180 LSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED----QHRLYQQI----KAG----AYDFPSPEWDTVTPEAKDL  247 (444)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS----HHHHHHHH----HHT----CCCCCTTTTTTSCHHHHHH
T ss_pred             CCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc----HHHHHHHH----HhC----CCCCCccccccCCHHHHHH
Confidence            68999988889999999999999999999999986431    11111110    000    0111111112235568899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..||.+||++.++++
T Consensus       248 i~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          248 INKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             HHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHcCCChhHCCCHHHHhc
Confidence            99999999999999999986

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.43  E-value=1.3e-13  Score=94.30  Aligned_cols=99  Identities=13%  Similarity=0.108  Sum_probs=62.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHh---------------------
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKEL---------------------   59 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------   59 (145)
                      +|||++.+..++.++|+||+|++++|+++|..||..... ..................+                     
T Consensus       206 ~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  284 (355)
T 2eu9_A          206 RPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN-REHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSS  284 (355)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSH
T ss_pred             cCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccc
Confidence            589999888899999999999999999999999875411 1111111111000000000                     


Q ss_pred             -----hhhhC---cchhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           60 -----NKLVG---EDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        60 -----~~~~~---~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                           .....   ............+.+|+.+||..||.+||++.+++.
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  333 (355)
T 2eu9_A          285 DGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL  333 (355)
T ss_dssp             HHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             hhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence                 00000   000111223557889999999999999999999975

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.43  E-value=3.1e-14  Score=99.21  Aligned_cols=85  Identities=22%  Similarity=0.378  Sum_probs=57.9

Q ss_pred             CCCccccc-----------CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcc--h
Q 032213            1 MSPEWQNS-----------GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGED--E   67 (145)
Q Consensus         1 ~aPe~~~~-----------~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~   67 (145)
                      +|||++.+           ..++.++|||||||+++||++|..||......   ...            +..++...  .
T Consensus       223 ~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~---~~~------------~~~~~~~~~~~  287 (390)
T 2zmd_A          223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---ISK------------LHAIIDPNHEI  287 (390)
T ss_dssp             CCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH---HHH------------HHHHHCTTSCC
T ss_pred             cChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH---HHH------------HHHHhCccccC
Confidence            58888754           36888999999999999999999998643111   000            00111110  1


Q ss_pred             hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 ~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ..+......+.+|+.+||..+|.+||++.+++.
T Consensus       288 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          288 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence            111122456889999999999999999999985

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.43  E-value=1.1e-13  Score=94.02  Aligned_cols=99  Identities=13%  Similarity=0.108  Sum_probs=63.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhH----------------------
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKE----------------------   58 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------   58 (145)
                      +|||++.+..++.++|+||+|++++|+++|..|+..... ..................                      
T Consensus       201 ~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  279 (339)
T 1z57_A          201 RAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS-KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSS  279 (339)
T ss_dssp             CCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH-HHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSH
T ss_pred             cChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCCHHHHhhccchhHHhhcccccccccc
Confidence            589999888899999999999999999999999875421 111111111000000000                      


Q ss_pred             ----hhhhhCc---chhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           59 ----LNKLVGE---DEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        59 ----~~~~~~~---~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                          .......   ...........+.+|+.+||..||.+||++.++++
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  328 (339)
T 1z57_A          280 AGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK  328 (339)
T ss_dssp             HHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             ccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence                0000000   00112234667899999999999999999999975

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.43  E-value=2.7e-14  Score=95.05  Aligned_cols=90  Identities=18%  Similarity=0.163  Sum_probs=63.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||||++++++++|..|+...      ....         ..   +....  .+......+.++
T Consensus       188 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~------~~~~---------~~---~~~~~--~~~~~~~~~~~l  247 (284)
T 2a19_B          188 MSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET------SKFF---------TD---LRDGI--ISDIFDKKEKTL  247 (284)
T ss_dssp             SCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH------HHHH---------HH---HHTTC--CCTTSCHHHHHH
T ss_pred             cChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH------HHHH---------HH---hhccc--ccccCCHHHHHH
Confidence            5889888888999999999999999999998775311      0000         00   00000  011123457899


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhccCCCCC
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEGTMEIPV  110 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~~~~~~~  110 (145)
                      +.+||..+|.+||++.+++..|..+...+.
T Consensus       248 i~~~l~~dp~~Rps~~e~l~~l~~~~~~~~  277 (284)
T 2a19_B          248 LQKLLSKKPEDRPNTSEILRTLTVWKKSPE  277 (284)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred             HHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence            999999999999999999999998776544

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.43  E-value=4.2e-14  Score=96.17  Aligned_cols=88  Identities=14%  Similarity=0.163  Sum_probs=61.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..||.....    .......        ...............+..+.+|
T Consensus       170 ~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~~~i--------~~~~~~~~~~~~~~~s~~~~~l  237 (321)
T 1tki_A          170 YAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN----QQIIENI--------MNAEYTFDEEAFKEISIEAMDF  237 (321)
T ss_dssp             SCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHHHH--------HHTCCCCCHHHHTTSCHHHHHH
T ss_pred             cCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH----HHHHHHH--------HcCCCCCChhhhccCCHHHHHH
Confidence            589998888889999999999999999999999875311    1111100        0000011011111235568999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..||.+||++.++++
T Consensus       238 i~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          238 VDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHcCCChhHCcCHHHHhc
Confidence            99999999999999999987

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.43  E-value=8.1e-14  Score=95.09  Aligned_cols=100  Identities=16%  Similarity=0.185  Sum_probs=64.4

Q ss_pred             CCCcccccC------CcccccchhhHHHHHHHHHhC----------CCCCCCCCCch-hhHhHHHHHHHHHHHhHhhhhh
Q 032213            1 MSPEWQNSG------LITVKSDVYSFGVVLLEIVCC----------RSNFEVNVSTA-DVVLLSTWVYNCFIAKELNKLV   63 (145)
Q Consensus         1 ~aPe~~~~~------~~~~~~dv~s~g~v~~el~~g----------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~   63 (145)
                      +|||++.+.      .++.++|+||||++++|+++|          ..|+....... ....+...    .    .....
T Consensus       218 ~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~----~----~~~~~  289 (342)
T 1b6c_B          218 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKV----V----CEQKL  289 (342)
T ss_dssp             CCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHH----H----TTSCC
T ss_pred             CCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHH----H----HHHHh
Confidence            578887654      234689999999999999999          55664331111 11111100    0    00011


Q ss_pred             Ccchh---hcHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           64 GEDEE---VDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        64 ~~~~~---~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      .+..+   ........+.+|+.+||..+|.+||++.+|++.|+.+.+.
T Consensus       290 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~  337 (342)
T 1b6c_B          290 RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  337 (342)
T ss_dssp             CCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             CCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence            11111   1235567899999999999999999999999999987543

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.43  E-value=1.7e-13  Score=94.17  Aligned_cols=87  Identities=15%  Similarity=0.092  Sum_probs=61.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..||...  ..   .+....        ...............+..+.+|
T Consensus       200 ~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~---~~~~~i--------~~~~~~~~~~~~~~~s~~~~~l  266 (351)
T 3c0i_A          200 MAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT--KE---RLFEGI--------IKGKYKMNPRQWSHISESAKDL  266 (351)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS--HH---HHHHHH--------HHTCCCCCHHHHTTSCHHHHHH
T ss_pred             cCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc--HH---HHHHHH--------HcCCCCCCccccccCCHHHHHH
Confidence            6899998888999999999999999999999998743  11   111000        0000001011111235568999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..||.+||++.+++.
T Consensus       267 i~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          267 VRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             HHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHCCCChhHCcCHHHHhc
Confidence            99999999999999999985

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.43  E-value=5.8e-14  Score=98.96  Aligned_cols=37  Identities=19%  Similarity=0.242  Sum_probs=33.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCC
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVN   37 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~   37 (145)
                      +|||++.+..++.++|||||||+++|+++|..||...
T Consensus       266 ~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~  302 (429)
T 3kvw_A          266 RAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE  302 (429)
T ss_dssp             CCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             cChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence            6899999888999999999999999999999998754

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.43  E-value=1.1e-13  Score=94.55  Aligned_cols=94  Identities=15%  Similarity=0.027  Sum_probs=62.7

Q ss_pred             CCCccccc--CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHH
Q 032213            1 MSPEWQNS--GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~--~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (145)
                      +|||++.+  ..++.++||||+|++++++++|..||.......    ....        ..........+........+.
T Consensus       241 ~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~--------~~~~~~~~~~~~~~~~~~~~~  308 (345)
T 3hko_A          241 VAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDAD----TISQ--------VLNKKLCFENPNYNVLSPLAR  308 (345)
T ss_dssp             CCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHH--------HHHCCCCTTSGGGGGSCHHHH
T ss_pred             cCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHH----HHHH--------HHhcccccCCcccccCCHHHH
Confidence            58898864  678899999999999999999999986441111    0000        000000000111112355688


Q ss_pred             HHHHhcccCCCCCCCCHHHHHH--HhhccC
Q 032213           79 RVRLLCIQDEPNLRPSMKNVIL--MLEGTM  106 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~--~L~~~~  106 (145)
                      +|+.+||..+|.+||++.++++  .++.+.
T Consensus       309 ~li~~~l~~~p~~Rps~~~~l~hp~~~~~~  338 (345)
T 3hko_A          309 DLLSNLLNRNVDERFDAMRALQHPWISQFS  338 (345)
T ss_dssp             HHHHHHSCSCTTTSCCHHHHHHSHHHHTTS
T ss_pred             HHHHHHcCCChhHCCCHHHHhcChhhccCh
Confidence            9999999999999999999987  455443

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.43  E-value=6.4e-15  Score=100.20  Aligned_cols=104  Identities=22%  Similarity=0.267  Sum_probs=65.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHH-HHHHHhHhhhhh--CcchhhcHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVY-NCFIAKELNKLV--GEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~   77 (145)
                      +|||.+.+..++.++|+||+|++++++++|..|+...  ............ .......+...+  ....+.+...+..+
T Consensus       215 ~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  292 (326)
T 2w1i_A          215 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP--PAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEI  292 (326)
T ss_dssp             CCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSH--HHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHH
T ss_pred             ECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCC--HHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHH
Confidence            5788888778899999999999999999998876521  000000000000 000000000111  01112233445678


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      .+++.+||..+|.+||++.++++.|+.+.
T Consensus       293 ~~li~~cl~~dP~~Rps~~el~~~L~~l~  321 (326)
T 2w1i_A          293 YMIMTECWNNNVNQRPSFRDLALRVDQIR  321 (326)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            99999999999999999999999998764

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.42  E-value=1.3e-14  Score=100.55  Aligned_cols=80  Identities=13%  Similarity=0.104  Sum_probs=57.5

Q ss_pred             CCCcccccC-----------CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhh
Q 032213            1 MSPEWQNSG-----------LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEV   69 (145)
Q Consensus         1 ~aPe~~~~~-----------~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (145)
                      +|||++.+.           .++.++||||||++++||++|..||.......                ....+...    
T Consensus       269 ~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~----------------~~~~~~~~----  328 (377)
T 3byv_A          269 EPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALG----------------GSEWIFRS----  328 (377)
T ss_dssp             CCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------C----------------CSGGGGSS----
T ss_pred             cChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCccccccc----------------chhhhhhh----
Confidence            589988876           78999999999999999999999986431100                00111111    


Q ss_pred             cHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           70 DLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        70 ~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ....+..+.+|+.+||..||.+||++.++++
T Consensus       329 ~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          329 CKNIPQPVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             ccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence            1122456889999999999999999999985

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.42  E-value=3.5e-14  Score=97.26  Aligned_cols=85  Identities=22%  Similarity=0.375  Sum_probs=57.8

Q ss_pred             CCCccccc-----------CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCc--ch
Q 032213            1 MSPEWQNS-----------GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGE--DE   67 (145)
Q Consensus         1 ~aPe~~~~-----------~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~   67 (145)
                      +|||++.+           ..++.++||||||++++++++|..||........  .+             ..+++.  ..
T Consensus       176 ~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~-------------~~~~~~~~~~  240 (343)
T 3dbq_A          176 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS--KL-------------HAIIDPNHEI  240 (343)
T ss_dssp             CCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH--HH-------------HHHHCTTSCC
T ss_pred             CCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH--HH-------------HHHhcCCccc
Confidence            57888754           5688899999999999999999999864311100  00             011111  11


Q ss_pred             hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 ~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ..+......+.+|+.+||..+|.+||++.+++.
T Consensus       241 ~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~  273 (343)
T 3dbq_A          241 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  273 (343)
T ss_dssp             CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence            122222456889999999999999999999986

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.42  E-value=2.1e-13  Score=94.17  Aligned_cols=88  Identities=18%  Similarity=0.154  Sum_probs=61.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..||... ..   .......        ..................+.+|
T Consensus       185 ~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~-~~---~~~~~~i--------~~~~~~~~~~~~~~~s~~~~~l  252 (361)
T 2yab_A          185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD-TK---QETLANI--------TAVSYDFDEEFFSQTSELAKDF  252 (361)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS-SH---HHHHHHH--------HTTCCCCCHHHHTTSCHHHHHH
T ss_pred             ECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC-CH---HHHHHHH--------HhcCCCCCchhccCCCHHHHHH
Confidence            6899998888999999999999999999999998743 11   1111100        0000000111112235568899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..||.+||++.+++.
T Consensus       253 i~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          253 IRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             HHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHCCCChhHCcCHHHHhc
Confidence            99999999999999999975

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.42  E-value=1.4e-13  Score=93.06  Aligned_cols=82  Identities=18%  Similarity=0.309  Sum_probs=57.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+ .++.++||||||++++|+++|..++...   .....        ...    ....  ...+......+.++
T Consensus       223 ~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~---~~~~~--------~~~----~~~~--~~~~~~~~~~l~~l  284 (311)
T 3p1a_A          223 MAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG---EGWQQ--------LRQ----GYLP--PEFTAGLSSELRSV  284 (311)
T ss_dssp             CCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH---HHHHH--------HTT----TCCC--HHHHTTSCHHHHHH
T ss_pred             cCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc---cHHHH--------Hhc----cCCC--cccccCCCHHHHHH
Confidence            68998875 7899999999999999999997765421   00000        000    0000  01122335678999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.++++
T Consensus       285 i~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          285 LVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             HHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHcCCChhhCcCHHHHHh
Confidence            99999999999999999976

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.42  E-value=1.4e-13  Score=92.72  Aligned_cols=92  Identities=15%  Similarity=0.175  Sum_probs=63.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..|+.....    ..+....        ...............+..+.++
T Consensus       174 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~i--------~~~~~~~~~~~~~~~~~~~~~l  241 (304)
T 2jam_A          174 VAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE----SKLFEKI--------KEGYYEFESPFWDDISESAKDF  241 (304)
T ss_dssp             CCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH----HHHHHHH--------HHCCCCCCTTTTTTSCHHHHHH
T ss_pred             cChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH----HHHHHHH--------HcCCCCCCccccccCCHHHHHH
Confidence            589999888899999999999999999999999864311    1111100        0000011111122335668999


Q ss_pred             HHhcccCCCCCCCCHHHHHH--Hhhc
Q 032213           81 RLLCIQDEPNLRPSMKNVIL--MLEG  104 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~--~L~~  104 (145)
                      +.+||..+|.+||++.+++.  .+..
T Consensus       242 i~~~l~~dp~~Rps~~~~l~h~~~~~  267 (304)
T 2jam_A          242 ICHLLEKDPNERYTCEKALSHPWIDG  267 (304)
T ss_dssp             HHHHHCSSTTTSCCHHHHHTSHHHHS
T ss_pred             HHHHcCCChhHCcCHHHHhcCccccC
Confidence            99999999999999999986  4444

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.42  E-value=3.3e-14  Score=94.52  Aligned_cols=84  Identities=24%  Similarity=0.301  Sum_probs=49.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||.+.+..++.++|+|++|++++++++|..|+........                +..+.......+......+.++
T Consensus       179 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~l  242 (278)
T 3cok_A          179 ISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT----------------LNKVVLADYEMPSFLSIEAKDL  242 (278)
T ss_dssp             -------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------------------CCSSCCCCCTTSCHHHHHH
T ss_pred             CCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH----------------HHHHhhcccCCccccCHHHHHH
Confidence            589998888889999999999999999999999864311100                0001111111222334568899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.+++.
T Consensus       243 i~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          243 IHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             HHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHcccCHhhCCCHHHHhc
Confidence            99999999999999999865

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.41  E-value=3.1e-14  Score=96.83  Aligned_cols=90  Identities=17%  Similarity=0.177  Sum_probs=56.4

Q ss_pred             CCCccc---ccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHH
Q 032213            1 MSPEWQ---NSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~---~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (145)
                      +|||++   .+..++.++||||||++++++++|..|+.....    .....        .    ....  .........+
T Consensus       217 ~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~----~~~~~--------~----~~~~--~~~~~~~~~~  278 (337)
T 3ll6_A          217 RTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK----LRIVN--------G----KYSI--PPHDTQYTVF  278 (337)
T ss_dssp             -------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------------------------CCC--CTTCCSSGGG
T ss_pred             CChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH----HHhhc--------C----cccC--CcccccchHH
Confidence            579988   456688899999999999999999999863311    00000        0    0000  0011112347


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      .+|+.+||..+|.+||++.++++.|+.+...
T Consensus       279 ~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~  309 (337)
T 3ll6_A          279 HSLIRAMLQVNPEERLSIAEVVHQLQEIAAA  309 (337)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            8899999999999999999999999887643

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.41  E-value=8.9e-14  Score=92.64  Aligned_cols=88  Identities=14%  Similarity=0.055  Sum_probs=61.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..|+.....    .......    ...    ......+........+.++
T Consensus       174 ~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~----~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~l  241 (284)
T 3kk8_A          174 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ----HRLYAQI----KAG----AYDYPSPEWDTVTPEAKSL  241 (284)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHH----HHT----CCCCCTTTTTTSCHHHHHH
T ss_pred             cCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch----hHHHHHH----Hhc----cccCCchhhcccCHHHHHH
Confidence            589998888899999999999999999999999864311    1111100    000    0011111112234568899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.++++
T Consensus       242 i~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          242 IDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             HHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHcccChhhCCCHHHHhc
Confidence            99999999999999999976

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.41  E-value=3e-14  Score=97.50  Aligned_cols=84  Identities=19%  Similarity=0.149  Sum_probs=60.3

Q ss_pred             CCCcccccCCc-ccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLI-TVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~-~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..+ +.++|+||+|++++++++|..||........                ...+.......+...+..+.+
T Consensus       174 ~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~----------------~~~i~~~~~~~p~~~s~~~~~  237 (336)
T 3h4j_B          174 AAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL----------------FKKVNSCVYVMPDFLSPGAQS  237 (336)
T ss_dssp             SCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC----------------BCCCCSSCCCCCTTSCHHHHH
T ss_pred             CCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH----------------HHHHHcCCCCCcccCCHHHHH
Confidence            58999987665 6789999999999999999999864311100                000111111123334556889


Q ss_pred             HHHhcccCCCCCCCCHHHHHH
Q 032213           80 VRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      |+.+||..||.+|||+.++++
T Consensus       238 li~~~L~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          238 LIRRMIVADPMQRITIQEIRR  258 (336)
T ss_dssp             HHHTTSCSSGGGSCCHHHHTT
T ss_pred             HHHHHcCCChhHCcCHHHHHh
Confidence            999999999999999999986

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.41  E-value=8.4e-14  Score=98.50  Aligned_cols=84  Identities=18%  Similarity=0.211  Sum_probs=62.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||||++++|+++|..||.... .   ..+...            +.......+......+.+|
T Consensus       316 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-~---~~~~~~------------i~~~~~~~p~~~~~~~~~l  379 (446)
T 4ejn_A          316 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-H---EKLFEL------------ILMEEIRFPRTLGPEAKSL  379 (446)
T ss_dssp             CCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-H---HHHHHH------------HHHCCCCCCTTSCHHHHHH
T ss_pred             cCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC-H---HHHHHH------------HHhCCCCCCccCCHHHHHH
Confidence            68999988889999999999999999999999986431 1   111110            1111112233345678999


Q ss_pred             HHhcccCCCCCCC-----CHHHHHH
Q 032213           81 RLLCIQDEPNLRP-----SMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rp-----t~~~v~~  100 (145)
                      +.+||..||.+||     ++.++++
T Consensus       380 i~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          380 LSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             HHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHHcccCHHHhCCCCCCCHHHHHh
Confidence            9999999999999     9999985

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.41  E-value=3.8e-13  Score=90.44  Aligned_cols=89  Identities=19%  Similarity=0.134  Sum_probs=60.1

Q ss_pred             CCCcccccCC--cccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHH
Q 032213            1 MSPEWQNSGL--ITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~--~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (145)
                      +|||++.+..  ++.++|+||+|++++++++|..|+... .   ...+...            +.......+......+.
T Consensus       178 ~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-~---~~~~~~~------------i~~~~~~~~~~~~~~l~  241 (305)
T 2wtk_C          178 QPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD-N---IYKLFEN------------IGKGSYAIPGDCGPPLS  241 (305)
T ss_dssp             CCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCS-S---HHHHHHH------------HHHCCCCCCSSSCHHHH
T ss_pred             cChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCc-h---HHHHHHH------------HhcCCCCCCCccCHHHH
Confidence            5788876533  367899999999999999999998743 1   1111110            00011112223345688


Q ss_pred             HHHHhcccCCCCCCCCHHHHHH--Hhhcc
Q 032213           79 RVRLLCIQDEPNLRPSMKNVIL--MLEGT  105 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~--~L~~~  105 (145)
                      +++.+||..||.+||++.++++  .+...
T Consensus       242 ~li~~~l~~dp~~Rps~~~ll~~~~~~~~  270 (305)
T 2wtk_C          242 DLLKGMLEYEPAKRFSIRQIRQHSWFRKK  270 (305)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHSHHHHSC
T ss_pred             HHHHHHccCChhhCCCHHHHhcCcccccC
Confidence            9999999999999999999986  34443

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.41  E-value=6.2e-14  Score=95.46  Aligned_cols=88  Identities=17%  Similarity=0.191  Sum_probs=61.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+|++|++++++++|..|+...... .   .....        ..................+.++
T Consensus       200 ~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~---~~~~i--------~~~~~~~~~~~~~~~~~~~~~l  267 (327)
T 3lm5_A          200 LAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ-E---TYLNI--------SQVNVDYSEETFSSVSQLATDF  267 (327)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-H---HHHHH--------HHTCCCCCTTTTTTSCHHHHHH
T ss_pred             cCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch-H---HHHHH--------HhcccccCchhhcccCHHHHHH
Confidence            5899998888999999999999999999999998643111 1   00000        0000111111222335568899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.++++
T Consensus       268 i~~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          268 IQSLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             HHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHcCCChhhCcCHHHHhC
Confidence            99999999999999999976

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.41  E-value=3.6e-13  Score=95.84  Aligned_cols=100  Identities=15%  Similarity=0.104  Sum_probs=62.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHH---HHH---HhHhhhhhC----------
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYN---CFI---AKELNKLVG----------   64 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~----------   64 (145)
                      +|||++.+..++.++||||+|++++||++|+.||...........+......   ...   .......+.          
T Consensus       230 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (464)
T 3ttj_A          230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTF  309 (464)
T ss_dssp             CCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCH
T ss_pred             cCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCCh
Confidence            5899999889999999999999999999999999754211111111110000   000   000000000          


Q ss_pred             -----c-----chhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           65 -----E-----DEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        65 -----~-----~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                           .     ...........+.+|+.+||..||.+|||+.++++
T Consensus       310 ~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  355 (464)
T 3ttj_A          310 PKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  355 (464)
T ss_dssp             HHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                 0     00111122567899999999999999999999986

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.41  E-value=9.7e-14  Score=96.21  Aligned_cols=88  Identities=17%  Similarity=0.137  Sum_probs=61.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||||+++++|++|..||......    ......        ..................+.+|
T Consensus       255 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~----~~~~~i--------~~~~~~~~~~~~~~~~~~~~~l  322 (373)
T 2x4f_A          255 LAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA----ETLNNI--------LACRWDLEDEEFQDISEEAKEF  322 (373)
T ss_dssp             CCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHHHH--------HHTCCCSCSGGGTTSCHHHHHH
T ss_pred             eChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHH--------HhccCCCChhhhccCCHHHHHH
Confidence            5899998888999999999999999999999998744111    111000        0000000011112235578999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.+++.
T Consensus       323 i~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          323 ISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             HHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHcCCChhhCCCHHHHhc
Confidence            99999999999999999986

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.41  E-value=7.5e-14  Score=96.40  Aligned_cols=88  Identities=14%  Similarity=0.049  Sum_probs=61.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..||....    ...+.....    ..    ............+..+.+|
T Consensus       197 ~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~----~~~~~~~i~----~~----~~~~~~~~~~~~~~~~~~l  264 (362)
T 2bdw_A          197 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED----QHRLYAQIK----AG----AYDYPSPEWDTVTPEAKSL  264 (362)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHH----HT----CCCCCTTGGGGSCHHHHHH
T ss_pred             cCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC----HHHHHHHHH----hC----CCCCCcccccCCCHHHHHH
Confidence            68999988889999999999999999999999986431    111111100    00    0010011112234568899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..||.+||++.+++.
T Consensus       265 i~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          265 IDSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             HHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHcCCChhhCcCHHHHhc
Confidence            99999999999999999975

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.41  E-value=1.2e-13  Score=93.86  Aligned_cols=105  Identities=10%  Similarity=0.050  Sum_probs=63.5

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhC---------c-----
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVG---------E-----   65 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-----   65 (145)
                      +|||++.+ ..++.++|+||+|++++++++|..||... ....................+.....         +     
T Consensus       167 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (324)
T 3mtl_A          167 RPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGS-TVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAE  245 (324)
T ss_dssp             CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS-SHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCC
T ss_pred             cChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccch
Confidence            58898875 56889999999999999999999998754 11111111100000000000000000         0     


Q ss_pred             -chhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH--HhhccC
Q 032213           66 -DEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL--MLEGTM  106 (145)
Q Consensus        66 -~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~--~L~~~~  106 (145)
                       ...........+.+|+.+||..||.+|||+.++++  .+..+.
T Consensus       246 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  289 (324)
T 3mtl_A          246 ALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLG  289 (324)
T ss_dssp             CHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred             hhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcc
Confidence             00111223456789999999999999999999987  455443

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.41  E-value=1.3e-13  Score=94.78  Aligned_cols=104  Identities=16%  Similarity=0.182  Sum_probs=63.0

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCc----------ch--
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGE----------DE--   67 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~--   67 (145)
                      +|||++.+. .++.++||||||++++++++|..||...........+.... .......+..+...          ..  
T Consensus       198 ~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (360)
T 3e3p_A          198 RAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVL-GCPSREVLRKLNPSHTDVDLYNSKGIPW  276 (360)
T ss_dssp             CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH-CCCCHHHHHHHCTTCCCGGGGCCCCCCH
T ss_pred             eCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHc-CCCCHHHHHhcccchhhccccccccCCc
Confidence            589988654 48999999999999999999999987542111111111100 00000000000000          00  


Q ss_pred             -----hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH--Hhhcc
Q 032213           68 -----EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL--MLEGT  105 (145)
Q Consensus        68 -----~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~--~L~~~  105 (145)
                           .........+.+|+.+||+.||.+||++.++++  .+..+
T Consensus       277 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  321 (360)
T 3e3p_A          277 SNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDEL  321 (360)
T ss_dssp             HHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGG
T ss_pred             ccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCcccccc
Confidence                 001113567899999999999999999999986  34443

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.40  E-value=2.9e-13  Score=93.38  Aligned_cols=99  Identities=15%  Similarity=0.096  Sum_probs=60.5

Q ss_pred             CCCcccc-cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHh------------hhhhCc-c
Q 032213            1 MSPEWQN-SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKEL------------NKLVGE-D   66 (145)
Q Consensus         1 ~aPe~~~-~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~-~   66 (145)
                      +|||++. ...++.++|+||+|++++++++|..||...........+...... .....+            ...... .
T Consensus       198 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (364)
T 3qyz_A          198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS-PSQEDLNCIINLKARNYLLSLPHKNK  276 (364)
T ss_dssp             CCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCS-CCHHHHHTCCCHHHHHHHHTSCCCCC
T ss_pred             CCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCC-CCHHHHHHhhhhhHHHHHHhcCCccC
Confidence            5888765 445889999999999999999999998754222221111110000 000000            000000 0


Q ss_pred             h---hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           67 E---EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        67 ~---~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .   .........+.+|+.+||..||.+||++.+++.
T Consensus       277 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          277 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             CCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            0   111223456889999999999999999999986

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.40  E-value=1.3e-13  Score=93.49  Aligned_cols=88  Identities=18%  Similarity=0.155  Sum_probs=60.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..|+... ..   .......        ...............+..+.++
T Consensus       185 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-~~---~~~~~~i--------~~~~~~~~~~~~~~~~~~~~~l  252 (321)
T 2a2a_A          185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD-TK---QETLANI--------TSVSYDFDEEFFSHTSELAKDF  252 (321)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS-SH---HHHHHHH--------HTTCCCCCHHHHTTCCHHHHHH
T ss_pred             cCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCC-CH---HHHHHHH--------HhcccccChhhhcccCHHHHHH
Confidence            5899988888999999999999999999999998643 11   1111000        0000000011112234568899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.+++.
T Consensus       253 i~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          253 IRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             HHTTSCSSTTTSCCHHHHHH
T ss_pred             HHHHcCCChhhCcCHHHHhc
Confidence            99999999999999999986

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.40  E-value=3.6e-13  Score=91.55  Aligned_cols=97  Identities=12%  Similarity=0.162  Sum_probs=61.1

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhh---------------hC
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKL---------------VG   64 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~   64 (145)
                      +|||++.+ ..++.++|+||+|++++++++|..|+..............   .......+...               ..
T Consensus       197 ~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (330)
T 3nsz_A          197 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA---KVLGTEDLYDYIDKYNIELDPRFNDILG  273 (330)
T ss_dssp             CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHH---HHHCHHHHHHHHHHTTCCCCTHHHHHHC
T ss_pred             cChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHH---HhcCCchhhhHHHHhccccccchhhhhh
Confidence            57888875 6688999999999999999999999864422211111110   00000000000               00


Q ss_pred             cc----------hhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           65 ED----------EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        65 ~~----------~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ..          ...+......+.+|+.+||..||.+|||+.++++
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          274 RHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             CCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             hccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            00          0011113567899999999999999999999986

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.40  E-value=7.5e-14  Score=94.38  Aligned_cols=99  Identities=13%  Similarity=0.101  Sum_probs=59.2

Q ss_pred             CCCccccc-----CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhc----H
Q 032213            1 MSPEWQNS-----GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVD----L   71 (145)
Q Consensus         1 ~aPe~~~~-----~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~   71 (145)
                      +|||++..     ..++.++|+||+|++++++++|..||.............. ............+.......+    .
T Consensus       188 ~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~  266 (316)
T 2ac3_A          188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGE-ACPACQNMLFESIQEGKYEFPDKDWA  266 (316)
T ss_dssp             CCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC-----CCHHHHHHHHHHHHHCCCCCCHHHHT
T ss_pred             cChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccc-cchhHHHHHHHHHhccCcccCchhcc
Confidence            57887764     4578899999999999999999999875421110000000 000000000000111111111    1


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           72 RTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        72 ~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .....+.+|+.+||..||.+||++.++++
T Consensus       267 ~~~~~~~~li~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          267 HISCAAKDLISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             cCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence            23456899999999999999999999987

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.39  E-value=7.3e-14  Score=97.44  Aligned_cols=107  Identities=7%  Similarity=-0.014  Sum_probs=68.5

Q ss_pred             CCCccccc--------CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhh-----------
Q 032213            1 MSPEWQNS--------GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNK-----------   61 (145)
Q Consensus         1 ~aPe~~~~--------~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------   61 (145)
                      +|||++.+        ..++.++|+||||++++|+++|..||........................+..           
T Consensus       182 ~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  261 (396)
T 4eut_A          182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDW  261 (396)
T ss_dssp             CCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEE
T ss_pred             cCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCccc
Confidence            47787653        45778999999999999999999998754222222222111111000000000           


Q ss_pred             --hhCcchhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           62 --LVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        62 --~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                        .+.............+.+++.+||..||.+||++.++++.+..+..
T Consensus       262 ~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~  309 (396)
T 4eut_A          262 SGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH  309 (396)
T ss_dssp             ESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred             CccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence              0000012235667788999999999999999999999998887654

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.39  E-value=1.6e-13  Score=91.83  Aligned_cols=87  Identities=16%  Similarity=0.294  Sum_probs=59.1

Q ss_pred             CCCcccccCC--cccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHH
Q 032213            1 MSPEWQNSGL--ITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~--~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (145)
                      +|||++.+..  ++.++|+|+||++++++++|..|+........  .....       .    ........+......+.
T Consensus       190 ~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~-------~----~~~~~~~~~~~~~~~~~  256 (295)
T 2clq_A          190 MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA--AMFKV-------G----MFKVHPEIPESMSAEAK  256 (295)
T ss_dssp             CCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH--HHHHH-------H----HHCCCCCCCTTSCHHHH
T ss_pred             cChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH--HHHhh-------c----cccccccccccCCHHHH
Confidence            5788876543  78899999999999999999999864311111  00000       0    00111122233456788


Q ss_pred             HHHHhcccCCCCCCCCHHHHHH
Q 032213           79 RVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +++.+||..+|.+||++.+++.
T Consensus       257 ~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          257 AFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             HHHHHTTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHccCChhhCCCHHHHhc
Confidence            9999999999999999999975

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.39  E-value=2e-13  Score=90.58  Aligned_cols=84  Identities=19%  Similarity=0.253  Sum_probs=58.9

Q ss_pred             CCCcccccCCc-ccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLI-TVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~-~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..+ +.++|+|++|++++++++|..|+.... .   ..+...         +   .......+......+.+
T Consensus       177 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-~---~~~~~~---------~---~~~~~~~~~~~~~~l~~  240 (276)
T 2h6d_A          177 AAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH-V---PTLFKK---------I---RGGVFYIPEYLNRSVAT  240 (276)
T ss_dssp             CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS-H---HHHHHH---------H---HHCCCCCCTTSCHHHHH
T ss_pred             cCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc-H---HHHHHH---------h---hcCcccCchhcCHHHHH
Confidence            58999876654 688999999999999999999986431 1   111110         0   00001112223456889


Q ss_pred             HHHhcccCCCCCCCCHHHHHH
Q 032213           80 VRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ++.+||..+|.+||++.+++.
T Consensus       241 li~~~l~~~p~~Rps~~~~l~  261 (276)
T 2h6d_A          241 LLMHMLQVDPLKRATIKDIRE  261 (276)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHccCChhhCCCHHHHHh
Confidence            999999999999999999987

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.39  E-value=9.2e-14  Score=95.48  Aligned_cols=87  Identities=20%  Similarity=0.177  Sum_probs=59.0

Q ss_pred             CCCcccc---cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHH
Q 032213            1 MSPEWQN---SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~---~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (145)
                      +|||++.   ...++.++||||||++++|+++|..|+........   +.    ... ..    . .+. ..+...+..+
T Consensus       217 ~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~---~~----~~~-~~----~-~~~-~~~~~~~~~l  282 (348)
T 1u5q_A          217 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA---LY----HIA-QN----E-SPA-LQSGHWSEYF  282 (348)
T ss_dssp             CCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH---HH----HHH-HS----C-CCC-CCCTTSCHHH
T ss_pred             eCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HH----HHH-hc----C-CCC-CCCCCCCHHH
Confidence            5899874   56788999999999999999999999864311100   00    000 00    0 000 0111224568


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHHH
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      .+|+.+||..+|.+||++.+++..
T Consensus       283 ~~li~~~l~~dP~~Rps~~~ll~h  306 (348)
T 1u5q_A          283 RNFVDSCLQKIPQDRPTSEVLLKH  306 (348)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             HHHHHHHcccChhhCcCHHHHhhC
Confidence            899999999999999999999763

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.39  E-value=2.1e-13  Score=94.78  Aligned_cols=100  Identities=17%  Similarity=0.160  Sum_probs=60.8

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCc--------------
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGE--------------   65 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------   65 (145)
                      +|||++.+ ..++.++|+||+||+++|+++|..||...........+.... .......+..+..+              
T Consensus       197 ~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~  275 (388)
T 3oz6_A          197 RAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVI-DFPSNEDVESIQSPFAKTMIESLKEKVE  275 (388)
T ss_dssp             CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH-CCCCHHHHHTSCCSSHHHHHHHHHHHCC
T ss_pred             CCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc-CCCCHHHHHhccCHHHHHHHHhCccccc
Confidence            58998875 578999999999999999999999987542111111111100 00000000000000              


Q ss_pred             --------chh----------hcHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 032213           66 --------DEE----------VDLRTLETMVRVRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        66 --------~~~----------~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                              ..+          ........+.+|+.+||..||.+|||+.+++..
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~H  329 (388)
T 3oz6_A          276 IRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKH  329 (388)
T ss_dssp             -----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             ccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCC
Confidence                    000          000224568899999999999999999999763

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.39  E-value=9.5e-14  Score=96.72  Aligned_cols=89  Identities=16%  Similarity=0.084  Sum_probs=61.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|+++++|++|..||.....    ........    ..    ............+..+.+|
T Consensus       217 ~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~----~~~~~~i~----~~----~~~~~~~~~~~~s~~~~~l  284 (387)
T 1kob_A          217 AAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD----LETLQNVK----RC----DWEFDEDAFSSVSPEAKDF  284 (387)
T ss_dssp             CCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH----HHHHHHHH----HC----CCCCCSSTTTTSCHHHHHH
T ss_pred             cCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH----HHHHHHHH----hC----CCCCCccccccCCHHHHHH
Confidence            689999888899999999999999999999999874311    11111000    00    0000001112235568999


Q ss_pred             HHhcccCCCCCCCCHHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      +.+||..||.+||++.++++.
T Consensus       285 i~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          285 IKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             HHTTSCSSGGGSCCHHHHHTS
T ss_pred             HHHHcCCChhHCcCHHHHhhC
Confidence            999999999999999999863

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.39  E-value=1e-13  Score=94.83  Aligned_cols=79  Identities=15%  Similarity=0.152  Sum_probs=59.1

Q ss_pred             CCCcccccCCc-ccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLI-TVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~-~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..+ +.++|+||+|++++++++|..||.....                      ........+......+.+
T Consensus       196 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----------------------~~~~~~~~~~~~~~~l~~  253 (335)
T 3dls_A          196 CAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE----------------------TVEAAIHPPYLVSKELMS  253 (335)
T ss_dssp             CCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG----------------------GTTTCCCCSSCCCHHHHH
T ss_pred             cChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH----------------------HHhhccCCCcccCHHHHH
Confidence            58998887766 7889999999999999999999864200                      000101111123456899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHH
Q 032213           80 VRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      |+.+||..+|.+||++.+++..
T Consensus       254 li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          254 LVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHC
T ss_pred             HHHHHccCChhhCcCHHHHhcC
Confidence            9999999999999999999874

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.39  E-value=3.8e-14  Score=95.60  Aligned_cols=99  Identities=14%  Similarity=0.098  Sum_probs=61.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhh-------hhCcch-----h
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNK-------LVGEDE-----E   68 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-----~   68 (145)
                      +|||++.+..++.++|+||+|++++++++|..||...........+.... .......+..       .+....     .
T Consensus       186 ~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (308)
T 3g33_A          186 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI-GLPPEDDWPRDVSLPRGAFPPRGPRPVQS  264 (308)
T ss_dssp             CCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHH-CCCCTTTSCSSCSSCGGGSCCCCCCCHHH
T ss_pred             cCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh-CCCChhhccchhhccccccCCCCCCcHHH
Confidence            58999988889999999999999999999999987541111111111000 0000000000       000000     1


Q ss_pred             hcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           69 VDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        69 ~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ........+.+|+.+||+.||.+|||+.++++
T Consensus       265 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          265 VVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             HSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence            11123456889999999999999999999975

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.38  E-value=2e-13  Score=92.78  Aligned_cols=84  Identities=15%  Similarity=0.166  Sum_probs=61.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++||++|..||.....    ....            ..+.......+......+.++
T Consensus       170 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~~------------~~i~~~~~~~p~~~~~~~~~l  233 (318)
T 1fot_A          170 IAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT----MKTY------------EKILNAELRFPPFFNEDVKDL  233 (318)
T ss_dssp             CCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH----HHHH------------HHHHHCCCCCCTTSCHHHHHH
T ss_pred             cCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH----HHHH------------HHHHhCCCCCCCCCCHHHHHH
Confidence            689999888899999999999999999999999874311    1111            011111112233345678999


Q ss_pred             HHhcccCCCCCCC-----CHHHHHH
Q 032213           81 RLLCIQDEPNLRP-----SMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rp-----t~~~v~~  100 (145)
                      +.+||..+|.+|+     ++.+++.
T Consensus       234 i~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          234 LSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             HHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHhccCHHHcCCCcCCCHHHHhc
Confidence            9999999999999     8888874

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.38  E-value=1.6e-13  Score=93.51  Aligned_cols=84  Identities=12%  Similarity=0.067  Sum_probs=60.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..||.....    .....            .+.......+......+.++
T Consensus       188 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~~~------------~i~~~~~~~p~~~~~~~~~l  251 (327)
T 3a62_A          188 MAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR----KKTID------------KILKCKLNLPPYLTQEARDL  251 (327)
T ss_dssp             SCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHH------------HHHHTCCCCCTTSCHHHHHH
T ss_pred             cCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH----HHHHH------------HHHhCCCCCCCCCCHHHHHH
Confidence            589998888899999999999999999999999874311    11111            01111112233345678999


Q ss_pred             HHhcccCCCCCCC-----CHHHHHH
Q 032213           81 RLLCIQDEPNLRP-----SMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rp-----t~~~v~~  100 (145)
                      +.+||..+|.+||     ++.+++.
T Consensus       252 i~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          252 LKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             HHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             HHHHHhcCHhhccCCCCCCHHHHHc
Confidence            9999999999999     7788875

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.38  E-value=1.4e-13  Score=91.63  Aligned_cols=88  Identities=20%  Similarity=0.158  Sum_probs=60.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..|+.....    .......    ...    ............+..+.++
T Consensus       178 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~l  245 (283)
T 3bhy_A          178 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK----QETLTNI----SAV----NYDFDEEYFSNTSELAKDF  245 (283)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHHHH----HTT----CCCCCHHHHTTCCHHHHHH
T ss_pred             cCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch----HHHHHHh----Hhc----ccCCcchhcccCCHHHHHH
Confidence            589988888899999999999999999999999864311    1111000    000    0000011112234568899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.+++.
T Consensus       246 i~~~l~~dp~~Rps~~~~l~  265 (283)
T 3bhy_A          246 IRRLLVKDPKRRMTIAQSLE  265 (283)
T ss_dssp             HHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHccCCHhHCcCHHHHHh
Confidence            99999999999999999986

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.38  E-value=1.8e-13  Score=94.14  Aligned_cols=84  Identities=14%  Similarity=0.148  Sum_probs=61.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|+++++|++|..||... ..   ..+..            .+.......+......+.++
T Consensus       205 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-~~---~~~~~------------~i~~~~~~~p~~~~~~~~~l  268 (350)
T 1rdq_E          205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD-QP---IQIYE------------KIVSGKVRFPSHFSSDLKDL  268 (350)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-SH---HHHHH------------HHHHCCCCCCTTCCHHHHHH
T ss_pred             cCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCC-CH---HHHHH------------HHHcCCCCCCCCCCHHHHHH
Confidence            6899998888999999999999999999999998743 11   11111            11111112233345678999


Q ss_pred             HHhcccCCCCCCCC-----HHHHHH
Q 032213           81 RLLCIQDEPNLRPS-----MKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt-----~~~v~~  100 (145)
                      +.+||..||.+||+     +.+++.
T Consensus       269 i~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          269 LRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHhhcCHHhccCCccCCHHHHHh
Confidence            99999999999998     888874

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.38  E-value=2.5e-13  Score=91.74  Aligned_cols=87  Identities=11%  Similarity=0.161  Sum_probs=60.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+|++|++++++++|..|+...... ....      .      +..........+...+..+.++
T Consensus       192 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~------~------~~~~~~~~~~~~~~~~~~l~~l  258 (314)
T 3com_A          192 MAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM-RAIF------M------IPTNPPPTFRKPELWSDNFTDF  258 (314)
T ss_dssp             CCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHH------H------HHHSCCCCCSSGGGSCHHHHHH
T ss_pred             cChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH-HHHH------H------HhcCCCcccCCcccCCHHHHHH
Confidence            5789888888899999999999999999999998643111 0000      0      0000011111122234568899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.+++.
T Consensus       259 i~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          259 VKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             HHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHccCChhhCcCHHHHHh
Confidence            99999999999999999975

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.38  E-value=2.2e-13  Score=92.11  Aligned_cols=94  Identities=19%  Similarity=0.212  Sum_probs=61.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..||...... .   ...   .     ................+..+.++
T Consensus       186 ~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-~---~~~---~-----~~~~~~~~~~~~~~~~~~~l~~l  253 (311)
T 3ork_A          186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV-S---VAY---Q-----HVREDPIPPSARHEGLSADLDAV  253 (311)
T ss_dssp             CCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-H---HHH---H-----HHHCCCCCHHHHSTTCCHHHHHH
T ss_pred             CCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-H---HHH---H-----HhcCCCCCcccccCCCCHHHHHH
Confidence            5899988888999999999999999999999998644111 0   000   0     00000000001112235568899


Q ss_pred             HHhcccCCCCCCCCHHHHHH-HhhccC
Q 032213           81 RLLCIQDEPNLRPSMKNVIL-MLEGTM  106 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~-~L~~~~  106 (145)
                      +.+||..||.+||+..+++. .+....
T Consensus       254 i~~~l~~dP~~R~~~~~~l~~~l~~~~  280 (311)
T 3ork_A          254 VLKALAKNPENRYQTAAEMRADLVRVH  280 (311)
T ss_dssp             HHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             HHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence            99999999999997666654 444443

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.38  E-value=5.3e-13  Score=93.80  Aligned_cols=89  Identities=16%  Similarity=0.114  Sum_probs=59.9

Q ss_pred             CCCcccc---cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHH
Q 032213            1 MSPEWQN---SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~---~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (145)
                      +|||++.   ...++.++|+||+|++++++++|..||..............       ..    ...............+
T Consensus       308 ~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~-------~~----~~~~~~~~~~~~~~~~  376 (419)
T 3i6u_A          308 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT-------SG----KYNFIPEVWAEVSEKA  376 (419)
T ss_dssp             CCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHH-------TT----CCCCCHHHHTTSCHHH
T ss_pred             cCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHh-------cC----CCCCCchhhcccCHHH
Confidence            6899885   35678899999999999999999999875422211111110       00    0000011112235568


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHH
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+|+.+||+.+|.+||++.++++
T Consensus       377 ~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          377 LDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHccCChhHCcCHHHHhC
Confidence            99999999999999999999986

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.38  E-value=2.2e-13  Score=92.16  Aligned_cols=99  Identities=11%  Similarity=0.126  Sum_probs=60.9

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhh-------------hCcc
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKL-------------VGED   66 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~   66 (145)
                      +|||++.+ ..++.++|+||+|++++++++|..||...........+...... .....+...             ....
T Consensus       186 ~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (311)
T 3niz_A          186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGT-PNPREWPQVQELPLWKQRTFQVFEKK  264 (311)
T ss_dssp             CCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCC-CCTTTSGGGTTSHHHHSCCCCCCCCC
T ss_pred             CCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCC-CChHHhhhhhccchhhhcccccccCC
Confidence            58998875 56889999999999999999999998754222221111110000 000000000             0000


Q ss_pred             --hhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           67 --EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        67 --~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                        ..........+.+|+.+||..||.+|||+.+++.
T Consensus       265 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          265 PWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             CHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             cHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence              0011122456789999999999999999999986

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.38  E-value=2.4e-13  Score=91.30  Aligned_cols=86  Identities=17%  Similarity=0.188  Sum_probs=57.8

Q ss_pred             CCCcccccCC---cccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHH
Q 032213            1 MSPEWQNSGL---ITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~~~~---~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (145)
                      +|||++.+..   ++.++|+||+|++++++++|..||....    ...+....    ...    ...  .+........+
T Consensus       204 ~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~----~~~~~~~~----~~~----~~~--~~~~~~~~~~l  269 (298)
T 2zv2_A          204 MAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER----IMCLHSKI----KSQ----ALE--FPDQPDIAEDL  269 (298)
T ss_dssp             CCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHH----HHC----CCC--CCSSSCCCHHH
T ss_pred             cChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc----HHHHHHHH----hcc----cCC--CCCccccCHHH
Confidence            5899887554   3678999999999999999999986431    11111000    000    000  01111234568


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHH
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+++.+||..||.+||++.+++.
T Consensus       270 ~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          270 KDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             HHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHHHhhcChhhCCCHHHHhc
Confidence            99999999999999999999864

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.38  E-value=1.8e-13  Score=92.88  Aligned_cols=99  Identities=14%  Similarity=0.094  Sum_probs=61.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhh-------hC-----cchh
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKL-------VG-----EDEE   68 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-----~~~~   68 (145)
                      +|||++.+..++.++|+||+|++++++++|..||...........+.... .......+...       ..     ....
T Consensus       186 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (326)
T 1blx_A          186 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI-GLPGEEDWPRDVALPRQAFHSKSAQPIEK  264 (326)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH-CCCCGGGSCTTCSSCGGGSCCCCCCCGGG
T ss_pred             eCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHc-CCCCcccCccccccchhhhcccCcchhhh
Confidence            58999888889999999999999999999999987541111111111000 00000000000       00     0001


Q ss_pred             hcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           69 VDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        69 ~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ........+.+|+.+||..+|.+||++.+++.
T Consensus       265 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          265 FVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             TCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            11233556889999999999999999999985

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.38  E-value=8e-13  Score=91.44  Aligned_cols=100  Identities=14%  Similarity=0.064  Sum_probs=62.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHH---------------HHHHHHHh------Hh
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTW---------------VYNCFIAK------EL   59 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~------~~   59 (145)
                      +|||++.+..++.++|+||+|++++++++|..||...........+...               ........      .+
T Consensus       193 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (371)
T 2xrw_A          193 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSF  272 (371)
T ss_dssp             CCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCH
T ss_pred             cCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccch
Confidence            5899998888999999999999999999999998754111111000000               00000000      00


Q ss_pred             hhhh-----CcchhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           60 NKLV-----GEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        60 ~~~~-----~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ....     +............+.+|+.+||..||.+|||+.+++.
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  318 (371)
T 2xrw_A          273 EKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  318 (371)
T ss_dssp             HHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             hhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence            0000     0000112233567899999999999999999999987

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.38  E-value=9.9e-14  Score=95.13  Aligned_cols=91  Identities=13%  Similarity=0.100  Sum_probs=61.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..||.... ......+.....    ..    ........+......+.+|
T Consensus       187 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-~~~~~~~~~~i~----~~----~~~~~~~~~~~~s~~~~~l  257 (342)
T 2qr7_A          187 VAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGP-DDTPEEILARIG----SG----KFSLSGGYWNSVSDTAKDL  257 (342)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSST-TSCHHHHHHHHH----HC----CCCCCSTTTTTSCHHHHHH
T ss_pred             cCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCC-cCCHHHHHHHHc----cC----CcccCccccccCCHHHHHH
Confidence            58898877778899999999999999999999987431 111111111100    00    0010011122345678999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..||.+||++.+++.
T Consensus       258 i~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          258 VSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             HHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHCCCChhHCcCHHHHhc
Confidence            99999999999999999975

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.37  E-value=7.5e-14  Score=93.53  Aligned_cols=84  Identities=14%  Similarity=0.294  Sum_probs=60.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+|++|++++++++|..|+...... .   ..            ..+.......+......+.++
T Consensus       182 ~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~---~~------------~~~~~~~~~~~~~~~~~~~~l  245 (294)
T 2rku_A          182 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-E---TY------------LRIKKNEYSIPKHINPVAASL  245 (294)
T ss_dssp             CCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-H---HH------------HHHHTTCCCCCTTSCHHHHHH
T ss_pred             CCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-H---HH------------HHHhhccCCCccccCHHHHHH
Confidence            5789888888899999999999999999999998643111 0   00            001111111222334568899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.+++.
T Consensus       246 i~~~l~~~p~~Rps~~~ll~  265 (294)
T 2rku_A          246 IQKMLQTDPTARPTINELLN  265 (294)
T ss_dssp             HHHHTCSSGGGSCCGGGGGG
T ss_pred             HHHHcccChhhCcCHHHHhh
Confidence            99999999999999999986

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.37  E-value=2.1e-13  Score=97.28  Aligned_cols=84  Identities=19%  Similarity=0.244  Sum_probs=59.8

Q ss_pred             CCCcccccCCc-ccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLI-TVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~-~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..+ +.++|+||+|++++++++|..||......    .+..            .+.......+......+.+
T Consensus       182 ~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~----~~~~------------~i~~~~~~~p~~~s~~~~~  245 (476)
T 2y94_A          182 AAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP----TLFK------------KICDGIFYTPQYLNPSVIS  245 (476)
T ss_dssp             CCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH----HHHH------------HHHTTCCCCCTTCCHHHHH
T ss_pred             EChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH----HHHH------------HHhcCCcCCCccCCHHHHH
Confidence            58998887655 67899999999999999999998754111    1110            0111111122223456889


Q ss_pred             HHHhcccCCCCCCCCHHHHHH
Q 032213           80 VRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      |+.+||..||.+||++.+++.
T Consensus       246 Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          246 LLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHcCCCchhCcCHHHHHh
Confidence            999999999999999999986

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.37  E-value=5.6e-13  Score=90.66  Aligned_cols=88  Identities=15%  Similarity=0.218  Sum_probs=59.5

Q ss_pred             CCCcccccCCc-ccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLI-TVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~-~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..+ +.++|+||+|++++++++|..||......  ......+.     ..  ....    .........+.+
T Consensus       174 ~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~~~~-----~~--~~~~----~~~~~~~~~~~~  240 (323)
T 3tki_A          174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS--CQEYSDWK-----EK--KTYL----NPWKKIDSAPLA  240 (323)
T ss_dssp             SCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT--SHHHHHHH-----TT--CTTS----TTGGGSCHHHHH
T ss_pred             cCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH--HHHHHHHh-----cc--cccC----CccccCCHHHHH
Confidence            58898876665 77899999999999999999998754111  11111110     00  0000    111223456789


Q ss_pred             HHHhcccCCCCCCCCHHHHHHH
Q 032213           80 VRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      |+.+||..||.+||++.++++.
T Consensus       241 li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          241 LLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             HHHHHSCSSTTTSCCHHHHTTC
T ss_pred             HHHHHccCChhhCcCHHHHhhC
Confidence            9999999999999999999763

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.37  E-value=1.6e-13  Score=92.74  Aligned_cols=85  Identities=22%  Similarity=0.384  Sum_probs=58.1

Q ss_pred             CCCccccc-----------CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCc--ch
Q 032213            1 MSPEWQNS-----------GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGE--DE   67 (145)
Q Consensus         1 ~aPe~~~~-----------~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~   67 (145)
                      +|||++.+           ..++.++|+||||++++++++|..|+......  ...+             ......  ..
T Consensus       195 ~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~~-------------~~~~~~~~~~  259 (313)
T 3cek_A          195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ--ISKL-------------HAIIDPNHEI  259 (313)
T ss_dssp             CCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH--HHHH-------------HHHHCTTSCC
T ss_pred             CCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH--HHHH-------------HHHHhccccc
Confidence            57887754           46788999999999999999999998643111  0000             001111  01


Q ss_pred             hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 ~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ..+......+.+++.+||..+|.+||++.+++.
T Consensus       260 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  292 (313)
T 3cek_A          260 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  292 (313)
T ss_dssp             CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence            112222456889999999999999999999986

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.37  E-value=1.6e-12  Score=89.95  Aligned_cols=100  Identities=11%  Similarity=0.054  Sum_probs=61.5

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHH---H--------HHHhHhhhhhCcc--
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYN---C--------FIAKELNKLVGED--   66 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~---~--------~~~~~~~~~~~~~--   66 (145)
                      +|||++.+ ..++.++|+||+|++++++++|..||...........+......   .        ........+....  
T Consensus       208 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (371)
T 4exu_A          208 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRK  287 (371)
T ss_dssp             SCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCC
T ss_pred             cCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcch
Confidence            58998876 67899999999999999999999998754111111111100000   0        0000000000000  


Q ss_pred             --hhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           67 --EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        67 --~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                        ..........+.+|+.+||..||.+||++.+++.
T Consensus       288 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  323 (371)
T 4exu_A          288 DFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  323 (371)
T ss_dssp             CHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             hHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence              0111223567899999999999999999999986

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.37  E-value=2e-13  Score=93.25  Aligned_cols=84  Identities=14%  Similarity=0.281  Sum_probs=60.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+|+||++++++++|..|+..... ..   ....            +.......+......+.+|
T Consensus       208 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~---~~~~------------~~~~~~~~~~~~~~~~~~l  271 (335)
T 2owb_A          208 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-KE---TYLR------------IKKNEYSIPKHINPVAASL  271 (335)
T ss_dssp             CCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-HH---HHHH------------HHHTCCCCCTTSCHHHHHH
T ss_pred             cCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH-HH---HHHH------------HhcCCCCCCccCCHHHHHH
Confidence            578988888889999999999999999999999864311 11   0000            0000011122234567899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||+.||.+||++.+++.
T Consensus       272 i~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          272 IQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             HHHHTCSSGGGSCCGGGGGG
T ss_pred             HHHHccCChhHCcCHHHHhc
Confidence            99999999999999999986

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.37  E-value=1.1e-13  Score=92.69  Aligned_cols=97  Identities=11%  Similarity=0.078  Sum_probs=60.3

Q ss_pred             CCCcccccCC-cccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHH---hHhhhhh---C---------
Q 032213            1 MSPEWQNSGL-ITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIA---KELNKLV---G---------   64 (145)
Q Consensus         1 ~aPe~~~~~~-~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~---------   64 (145)
                      +|||++.+.. ++.++|+||+|++++++++|..|+.........   ..........   ..+....   +         
T Consensus       168 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (292)
T 3o0g_A          168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ---LKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPA  244 (292)
T ss_dssp             CCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHH---HHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCT
T ss_pred             cChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHH---HHHHHHHhCCCChhhhhhhcccccccccccccC
Confidence            5899887655 799999999999999999998886543222111   1111110000   0000000   0         


Q ss_pred             --cchhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           65 --EDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        65 --~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                        ............+.+|+.+||..||.+|||+.++++
T Consensus       245 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          245 TTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             TCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence              000111233556889999999999999999999976

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.37  E-value=6.4e-13  Score=94.92  Aligned_cols=92  Identities=16%  Similarity=0.106  Sum_probs=62.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+ .++.++|+||+|++++++++|..||... ..   ..+.....    ..    ......+.....+..+.+|
T Consensus       190 ~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~-~~---~~~~~~i~----~~----~~~~~~~~~~~~s~~~~~l  256 (486)
T 3mwu_A          190 IAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK-NE---YDILKRVE----TG----KYAFDLPQWRTISDDAKDL  256 (486)
T ss_dssp             CCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCS-SH---HHHHHHHH----HT----CCCSCSGGGGGSCHHHHHH
T ss_pred             CCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC-CH---HHHHHHHH----hC----CCCCCCcccCCCCHHHHHH
Confidence            68999865 5899999999999999999999998753 11   11111100    00    0111111222335568899


Q ss_pred             HHhcccCCCCCCCCHHHHHH--Hhhcc
Q 032213           81 RLLCIQDEPNLRPSMKNVIL--MLEGT  105 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~--~L~~~  105 (145)
                      +.+||..+|.+|||+.+++.  .+...
T Consensus       257 i~~~L~~dp~~R~t~~~~l~hp~~~~~  283 (486)
T 3mwu_A          257 IRKMLTFHPSLRITATQCLEHPWIQKY  283 (486)
T ss_dssp             HHHHTCSSTTTSCCHHHHHHCHHHHHT
T ss_pred             HHHHcCCChhhCcCHHHHhcCHhhccC
Confidence            99999999999999999987  35443

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.37  E-value=4.7e-13  Score=89.47  Aligned_cols=86  Identities=21%  Similarity=0.324  Sum_probs=58.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++. +.++.++|+||+|++++++++|..|+.........   ...         +.....+ ...+......+.++
T Consensus       197 ~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~---~~~---------~~~~~~~-~~~~~~~~~~l~~l  262 (290)
T 1t4h_A          197 MAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI---YRR---------VTSGVKP-ASFDKVAIPEVKEI  262 (290)
T ss_dssp             CCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH---HHH---------HTTTCCC-GGGGGCCCHHHHHH
T ss_pred             CCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHH---HHH---------HhccCCc-cccCCCCCHHHHHH
Confidence            5899876 45889999999999999999999998643111111   000         0000000 01112223468999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.+++.
T Consensus       263 i~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          263 IEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHccCChhhCCCHHHHhh
Confidence            99999999999999999975

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.37  E-value=1.3e-13  Score=93.84  Aligned_cols=91  Identities=16%  Similarity=0.191  Sum_probs=53.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCc----chhhcHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGE----DEEVDLRTLET   76 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~   76 (145)
                      +|||++.+..++.++|+||+|++++++++|..||..............         .+..+...    ...........
T Consensus       176 ~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~---------~~~~i~~~~~~~~~~~~~~~s~~  246 (325)
T 3kn6_A          176 AAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVE---------IMKKIKKGDFSFEGEAWKNVSQE  246 (325)
T ss_dssp             --------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHH---------HHHHHTTTCCCCCSHHHHTSCHH
T ss_pred             cCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHH---------HHHHHHcCCCCCCcccccCCCHH
Confidence            589999888899999999999999999999999875311100000000         00111111    11112234567


Q ss_pred             HHHHHHhcccCCCCCCCCHHHHHH
Q 032213           77 MVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        77 ~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+|+.+||..||.+||++.+++.
T Consensus       247 ~~~li~~~L~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          247 AKDLIQGLLTVDPNKRLKMSGLRY  270 (325)
T ss_dssp             HHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred             HHHHHHHHCCCChhHCCCHHHHhc
Confidence            899999999999999999998864

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.37  E-value=2.4e-13  Score=93.59  Aligned_cols=84  Identities=17%  Similarity=0.202  Sum_probs=60.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++||++|..||... ..   ..+..            .+.......+......+.+|
T Consensus       188 ~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~-~~---~~~~~------------~i~~~~~~~p~~~s~~~~~l  251 (353)
T 2i0e_A          188 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE-DE---DELFQ------------SIMEHNVAYPKSMSKEAVAI  251 (353)
T ss_dssp             CCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS-SH---HHHHH------------HHHHCCCCCCTTSCHHHHHH
T ss_pred             cChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC-CH---HHHHH------------HHHhCCCCCCCCCCHHHHHH
Confidence            6899998888999999999999999999999998743 11   11111            11111122233445678999


Q ss_pred             HHhcccCCCCCCCC-----HHHHHH
Q 032213           81 RLLCIQDEPNLRPS-----MKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt-----~~~v~~  100 (145)
                      +.+||..+|.+||+     +.+++.
T Consensus       252 i~~lL~~dP~~R~~~~~~~~~~i~~  276 (353)
T 2i0e_A          252 CKGLMTKHPGKRLGCGPEGERDIKE  276 (353)
T ss_dssp             HHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred             HHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            99999999999995     466654

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.37  E-value=1e-12  Score=90.83  Aligned_cols=105  Identities=13%  Similarity=0.091  Sum_probs=64.2

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhH------------hhhhh---C
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKE------------LNKLV---G   64 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~---~   64 (145)
                      +|||++.+ ..++.++|+||+|++++|+++|+.||...........+.... .......            +..+.   .
T Consensus       192 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (367)
T 1cm8_A          192 RAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVT-GTPPAEFVQRLQSDEAKNYMKGLPELEK  270 (367)
T ss_dssp             CCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH-CCCCHHHHHTCSCHHHHHHHHHSCCCCC
T ss_pred             CCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc-CCCCHHHHHHhhhHHHHHHHHhCCCCCC
Confidence            58998876 678999999999999999999999987541111111111000 0000000            00000   0


Q ss_pred             cch-hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH--HhhccC
Q 032213           65 EDE-EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL--MLEGTM  106 (145)
Q Consensus        65 ~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~--~L~~~~  106 (145)
                      ... .........+.+|+.+||..||.+|||+.+++.  .++.+.
T Consensus       271 ~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~  315 (367)
T 1cm8_A          271 KDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  315 (367)
T ss_dssp             CCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             CCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence            000 111223556899999999999999999999987  354443

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.36  E-value=6.1e-14  Score=98.40  Aligned_cols=79  Identities=11%  Similarity=0.089  Sum_probs=56.6

Q ss_pred             CCCccc----------ccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhc
Q 032213            1 MSPEWQ----------NSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVD   70 (145)
Q Consensus         1 ~aPe~~----------~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (145)
                      +|||++          ....++.++||||||++++|+++|+.||.......                ....++....   
T Consensus       274 ~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~----------------~~~~~~~~~~---  334 (413)
T 3dzo_A          274 APPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALG----------------GSEWIFRSCK---  334 (413)
T ss_dssp             CCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGS----------------CSGGGGSSCC---
T ss_pred             eCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhh----------------hHHHHHhhcc---
Confidence            688988          45568889999999999999999999986431110                0111121111   


Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCCHHHHH
Q 032213           71 LRTLETMVRVRLLCIQDEPNLRPSMKNVI   99 (145)
Q Consensus        71 ~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~   99 (145)
                       ..+..+.+|+.+||..+|.+||++.+++
T Consensus       335 -~~~~~~~~li~~~l~~dP~~Rpt~~~~l  362 (413)
T 3dzo_A          335 -NIPQPVRALLEGFLRYPKEDRLLPLQAM  362 (413)
T ss_dssp             -CCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             -cCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence             1235689999999999999999976664

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.36  E-value=1.7e-13  Score=92.14  Aligned_cols=86  Identities=17%  Similarity=0.277  Sum_probs=60.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+|+||++++++++|..|+..... .   .....         +.....  ...+...+..+.++
T Consensus       186 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~---~~~~~---------~~~~~~--~~~~~~~~~~l~~l  250 (303)
T 3a7i_A          186 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP-M---KVLFL---------IPKNNP--PTLEGNYSKPLKEF  250 (303)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-H---HHHHH---------HHHSCC--CCCCSSCCHHHHHH
T ss_pred             cCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH-H---HHHHH---------hhcCCC--CCCccccCHHHHHH
Confidence            588988888889999999999999999999999864311 1   11000         000000  01112234568899


Q ss_pred             HHhcccCCCCCCCCHHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      +.+||..+|.+||++.+++..
T Consensus       251 i~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          251 VEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             HHHHCCSSGGGSCCHHHHTTC
T ss_pred             HHHHcCCChhhCcCHHHHhhC
Confidence            999999999999999999763

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.36  E-value=1.9e-13  Score=94.34  Aligned_cols=88  Identities=19%  Similarity=0.180  Sum_probs=58.7

Q ss_pred             CCCcccccCCcccc-cchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcch--hhcHHHHHHH
Q 032213            1 MSPEWQNSGLITVK-SDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDE--EVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~~~~~~~~-~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~   77 (145)
                      +|||++.+..+..+ +|+||+|++++++++|..||..............            .+.....  +........+
T Consensus       184 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~s~~~  251 (361)
T 3uc3_A          184 IAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQ------------RILSVKYSIPDDIRISPEC  251 (361)
T ss_dssp             SCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHH------------HHHTTCCCCCTTSCCCHHH
T ss_pred             CChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHH------------HHhcCCCCCCCcCCCCHHH
Confidence            58998877776655 8999999999999999999875422222111111            0111111  1111224568


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHH
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+|+.+||..+|.+||++.+++.
T Consensus       252 ~~li~~~L~~dP~~Rps~~ell~  274 (361)
T 3uc3_A          252 CHLISRIFVADPATRISIPEIKT  274 (361)
T ss_dssp             HHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHHHHHHccCChhHCcCHHHHHh
Confidence            89999999999999999999986

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.36  E-value=7.7e-13  Score=87.72  Aligned_cols=87  Identities=15%  Similarity=0.234  Sum_probs=58.9

Q ss_pred             CCCcccccCCc-ccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLI-TVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~-~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..+ +.++|+||+|++++++++|..|+.......  ..+..+.     ..  ....    .........+.+
T Consensus       174 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~-----~~--~~~~----~~~~~~~~~~~~  240 (276)
T 2yex_A          174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QEYSDWK-----EK--KTYL----NPWKKIDSAPLA  240 (276)
T ss_dssp             CCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS--HHHHHHH-----TT--CTTS----TTGGGSCHHHHH
T ss_pred             cChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH--HHHHHhh-----hc--cccc----CchhhcCHHHHH
Confidence            58998876654 778999999999999999999987542111  1111110     00  0000    111123456789


Q ss_pred             HHHhcccCCCCCCCCHHHHHH
Q 032213           80 VRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ++.+||..+|.+||++.+++.
T Consensus       241 li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          241 LLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             HHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHCCCCchhCCCHHHHhc
Confidence            999999999999999999875

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.36  E-value=3.6e-13  Score=90.45  Aligned_cols=87  Identities=17%  Similarity=0.217  Sum_probs=58.7

Q ss_pred             CCCccc-----ccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHH
Q 032213            1 MSPEWQ-----NSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLE   75 (145)
Q Consensus         1 ~aPe~~-----~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (145)
                      +|||++     ....++.++|+|++|++++++++|..|+.......   .+..          +.....+....+...+.
T Consensus       184 ~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~----------~~~~~~~~~~~~~~~~~  250 (302)
T 2j7t_A          184 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR---VLLK----------IAKSDPPTLLTPSKWSV  250 (302)
T ss_dssp             CCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---HHHH----------HHHSCCCCCSSGGGSCH
T ss_pred             cCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH---HHHH----------HhccCCcccCCccccCH
Confidence            578877     35668889999999999999999999987441110   0000          00000111112223355


Q ss_pred             HHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           76 TMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        76 ~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+.+++.+||..+|.+||++.++++
T Consensus       251 ~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          251 EFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             HHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             HHHHHHHHHcccChhhCCCHHHHhc
Confidence            6889999999999999999998864

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.36  E-value=2.3e-13  Score=91.03  Aligned_cols=99  Identities=13%  Similarity=0.111  Sum_probs=59.6

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhh-----hCcch-------
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKL-----VGEDE-------   67 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-------   67 (145)
                      +|||++.+ ..++.++|+||+|++++++++|..||...........+.... .......+...     .++..       
T Consensus       167 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (288)
T 1ob3_A          167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRIL-GTPNSKNWPNVTELPKYDPNFTVYEPLP  245 (288)
T ss_dssp             CCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH-CCCCTTTSTTGGGSTTCCTTCCCCCCCC
T ss_pred             cCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH-CCCChhhchhhhcccccccccccccCcc
Confidence            58998865 458899999999999999999999987541111111110000 00000000000     00000       


Q ss_pred             --hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 --EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 --~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                        .........+.+|+.+||..||.+||++.+++.
T Consensus       246 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          246 WESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             GGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence              011123456789999999999999999999975

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.36  E-value=7.1e-14  Score=96.66  Aligned_cols=91  Identities=9%  Similarity=-0.006  Sum_probs=60.7

Q ss_pred             CCCccccc--CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCc--chhhcHHHHHH
Q 032213            1 MSPEWQNS--GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGE--DEEVDLRTLET   76 (145)
Q Consensus         1 ~aPe~~~~--~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   76 (145)
                      +|||++.+  ..++.++||||||++++++++|..||......... .+        ...........  ..+.....+..
T Consensus       258 ~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~  328 (371)
T 3q60_A          258 APREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKG-SW--------KRPSLRVPGTDSLAFGSCTPLPDF  328 (371)
T ss_dssp             CCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTT-CC--------CBCCTTSCCCCSCCCTTSSCCCHH
T ss_pred             cChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCccccc-ch--------hhhhhhhccccccchhhccCCCHH
Confidence            68999976  67899999999999999999999998754111000 00        00000000000  01111234567


Q ss_pred             HHHHHHhcccCCCCCCCCHHHHHH
Q 032213           77 MVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        77 ~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+|+.+||..||.+||++.+++.
T Consensus       329 ~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          329 VKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             HHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             HHHHHHHHcCCChhhCCCHHHHhc
Confidence            899999999999999999999964

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.36  E-value=5.1e-13  Score=90.08  Aligned_cols=100  Identities=13%  Similarity=0.172  Sum_probs=60.5

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHH-------HHHHHHhHh-hh--hhCcch--
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWV-------YNCFIAKEL-NK--LVGEDE--   67 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~-~~--~~~~~~--   67 (145)
                      +|||++.+ ..++.++|+||+|++++++++|..|+...........+....       ......... ..  +.+...  
T Consensus       169 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (311)
T 4agu_A          169 RSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDME  248 (311)
T ss_dssp             CCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCC
T ss_pred             cChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccc
Confidence            57888865 567899999999999999999999987542111111111000       000000000 00  000000  


Q ss_pred             ---hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 ---EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 ---~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                         .........+.+|+.+||..||.+|||+.++++
T Consensus       249 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          249 PLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             CHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             hhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence               001123456889999999999999999999986

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.36  E-value=7.8e-14  Score=96.05  Aligned_cols=84  Identities=18%  Similarity=0.294  Sum_probs=60.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++||++|..||... ..   ..+..            .+.......+......+.+|
T Consensus       191 ~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~-~~---~~~~~------------~i~~~~~~~p~~~~~~~~~l  254 (353)
T 3txo_A          191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE-NE---DDLFE------------AILNDEVVYPTWLHEDATGI  254 (353)
T ss_dssp             CCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS-SH---HHHHH------------HHHHCCCCCCTTSCHHHHHH
T ss_pred             EChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC-CH---HHHHH------------HHHcCCCCCCCCCCHHHHHH
Confidence            6899988888999999999999999999999999754 11   11111            11111122233345568899


Q ss_pred             HHhcccCCCCCCCCH------HHHHH
Q 032213           81 RLLCIQDEPNLRPSM------KNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~------~~v~~  100 (145)
                      +.+||..+|.+||++      .+++.
T Consensus       255 i~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          255 LKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             HHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             HHHHhhhCHHHccCCcccCCHHHHhh
Confidence            999999999999998      67764

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.36  E-value=1.7e-13  Score=93.65  Aligned_cols=96  Identities=16%  Similarity=0.182  Sum_probs=53.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..|+...............    ....    ......+........+.+|
T Consensus       196 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~----~~~~----~~~~~~~~~~~~~~~~~~l  267 (336)
T 3fhr_A          196 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRR----IRLG----QYGFPNPEWSEVSEDAKQL  267 (336)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------------CCCTTTSTTCCHHHHHH
T ss_pred             cChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHh----hhcc----ccccCchhhccCCHHHHHH
Confidence            5899988888999999999999999999999998643111100000000    0000    0000001112335568899


Q ss_pred             HHhcccCCCCCCCCHHHHHH--Hhhc
Q 032213           81 RLLCIQDEPNLRPSMKNVIL--MLEG  104 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~--~L~~  104 (145)
                      +.+||..+|.+||++.+++.  .++.
T Consensus       268 i~~~L~~dP~~Rpt~~ell~hp~~~~  293 (336)
T 3fhr_A          268 IRLLLKTDPTERLTITQFMNHPWINQ  293 (336)
T ss_dssp             HHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             HHHHCCCChhHCcCHHHHhcCccccc
Confidence            99999999999999999987  4544

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.35  E-value=3.3e-13  Score=94.86  Aligned_cols=99  Identities=16%  Similarity=0.132  Sum_probs=61.6

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhC-------cch-----
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVG-------EDE-----   67 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-----   67 (145)
                      +|||++.+. .++.++||||+||+++||++|+.||...........+.... .......+.....       +..     
T Consensus       223 ~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~l-g~p~~~~~~~~~~~~~~~~~p~~~~~~~  301 (420)
T 1j1b_A          223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL-GTPTREQIREMNPNYTEFKFPQIKAHPW  301 (420)
T ss_dssp             CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH-CSCCHHHHHHHCSCCCCCCCCCCCCCCH
T ss_pred             CCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh-CCCCHHHHHhhChhhhhhccCccCCCCH
Confidence            589988754 68999999999999999999999987541111111111100 0000001110000       000     


Q ss_pred             --hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 --EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 --~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                        ..+......+.+|+.+||..||.+||++.+++.
T Consensus       302 ~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          302 TKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             HHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence              011223467899999999999999999999986

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.35  E-value=1.2e-13  Score=95.78  Aligned_cols=80  Identities=15%  Similarity=0.164  Sum_probs=57.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++||++|..||.... .   ..+..            .+.......+......+.+|
T Consensus       206 ~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-~---~~~~~------------~i~~~~~~~~~~~~~~~~~l  269 (373)
T 2r5t_A          206 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN-T---AEMYD------------NILNKPLQLKPNITNSARHL  269 (373)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB-H---HHHHH------------HHHHSCCCCCSSSCHHHHHH
T ss_pred             cCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-H---HHHHH------------HHHhcccCCCCCCCHHHHHH
Confidence            68999988889999999999999999999999987431 1   11111            11111112222345568999


Q ss_pred             HHhcccCCCCCCCCHH
Q 032213           81 RLLCIQDEPNLRPSMK   96 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~   96 (145)
                      +.+||..+|.+|+++.
T Consensus       270 i~~lL~~dp~~R~~~~  285 (373)
T 2r5t_A          270 LEGLLQKDRTKRLGAK  285 (373)
T ss_dssp             HHHHTCSSGGGSTTTT
T ss_pred             HHHHcccCHHhCCCCC
Confidence            9999999999999974

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.35  E-value=2.5e-13  Score=99.83  Aligned_cols=87  Identities=17%  Similarity=0.146  Sum_probs=61.5

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++.. ..|+.++|+||+||+++||++|..||...... ....+...            +.......|...+..+.+
T Consensus       357 mAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~-~~~~i~~~------------i~~~~~~~p~~~S~~a~d  423 (689)
T 3v5w_A          357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK-DKHEIDRM------------TLTMAVELPDSFSPELRS  423 (689)
T ss_dssp             CCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCC-CHHHHHHH------------HHHCCCCCCTTSCHHHHH
T ss_pred             cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHh------------hcCCCCCCCccCCHHHHH
Confidence            79999964 57999999999999999999999999753111 11111111            111112233344667899


Q ss_pred             HHHhcccCCCCCCCC-----HHHHHH
Q 032213           80 VRLLCIQDEPNLRPS-----MKNVIL  100 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt-----~~~v~~  100 (145)
                      |+.+||..||.+|++     +.+++.
T Consensus       424 LI~~lL~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          424 LLEGLLQRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             HHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred             HHHHHccCCHhHCCCCCCCCHHHHhc
Confidence            999999999999998     677763

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.35  E-value=4.5e-13  Score=88.97  Aligned_cols=87  Identities=15%  Similarity=0.145  Sum_probs=57.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+ .++.++|+||+|++++++++|..|+......    ......    ...    ...............+.++
T Consensus       175 ~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~~~----~~~----~~~~~~~~~~~~~~~~~~l  241 (277)
T 3f3z_A          175 VSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS----EVMLKI----REG----TFTFPEKDWLNVSPQAESL  241 (277)
T ss_dssp             CCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHH----HHC----CCCCCHHHHTTSCHHHHHH
T ss_pred             cChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHH----HHHHHH----HhC----CCCCCchhhhcCCHHHHHH
Confidence            57887754 4889999999999999999999998643111    110000    000    0000000011235578999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.++++
T Consensus       242 i~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          242 IRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             HHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHccCChhhCcCHHHHhc
Confidence            99999999999999999975

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.35  E-value=3.4e-13  Score=91.52  Aligned_cols=83  Identities=22%  Similarity=0.262  Sum_probs=57.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++++++|..++..      ......         .....  ............+.++
T Consensus       243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~------~~~~~~---------~~~~~--~~~~~~~~~~~~~~~l  305 (332)
T 3qd2_B          243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME------RVRIIT---------DVRNL--KFPLLFTQKYPQEHMM  305 (332)
T ss_dssp             SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH------HHHHHH---------HHHTT--CCCHHHHHHCHHHHHH
T ss_pred             cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH------HHHHHH---------Hhhcc--CCCcccccCChhHHHH
Confidence            589998888899999999999999999998655321      000000         00000  1111223344567899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.++++
T Consensus       306 i~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          306 VQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             HHHHHCSSGGGSCCHHHHHH
T ss_pred             HHHHccCCCCcCCCHHHHhh
Confidence            99999999999999999986

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.35  E-value=2.8e-13  Score=94.59  Aligned_cols=87  Identities=15%  Similarity=0.244  Sum_probs=58.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhh-HhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADV-VLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+|++++||++|..||......... .......        ...+.......|......+.+
T Consensus       220 ~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~--------~~~i~~~~~~~p~~~s~~~~~  291 (396)
T 4dc2_A          220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL--------FQVILEKQIRIPRSLSVKAAS  291 (396)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHH--------HHHHHHCCCCCCTTSCHHHHH
T ss_pred             CCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHH--------HHHHhccccCCCCcCCHHHHH
Confidence            6899999888999999999999999999999999643111000 0000000        011111222233344567899


Q ss_pred             HHHhcccCCCCCCCCH
Q 032213           80 VRLLCIQDEPNLRPSM   95 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~   95 (145)
                      |+.+||..||.+|+++
T Consensus       292 li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          292 VLKSFLNKDPKERLGC  307 (396)
T ss_dssp             HHHHHTCSCTTTSTTC
T ss_pred             HHHHHhcCCHhHcCCC
Confidence            9999999999999985

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.35  E-value=6.6e-13  Score=93.72  Aligned_cols=89  Identities=19%  Similarity=0.200  Sum_probs=60.2

Q ss_pred             CCCccccc-------CCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHH
Q 032213            1 MSPEWQNS-------GLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLR   72 (145)
Q Consensus         1 ~aPe~~~~-------~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (145)
                      +|||++.+       ..++.++|+||+||+++|+++ |..|+......  ...+.        .. ..............
T Consensus       199 ~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--~~~i~--------~~-~~~~~~~~~~~~~~  267 (434)
T 2rio_A          199 RAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR--ESNII--------RG-IFSLDEMKCLHDRS  267 (434)
T ss_dssp             SCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH--HHHHH--------HT-CCCCCCCTTCCCHH
T ss_pred             cCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh--HHHHh--------cC-CCCccccccccccc
Confidence            58898865       568899999999999999998 88888543111  10000        00 00000001112344


Q ss_pred             HHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           73 TLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        73 ~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ....+.+|+.+||..+|.+||++.+++.
T Consensus       268 ~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          268 LIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             HHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             chHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            5677899999999999999999999975

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.35  E-value=4.7e-13  Score=92.49  Aligned_cols=88  Identities=14%  Similarity=0.136  Sum_probs=58.1

Q ss_pred             CCCccccc------CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHH
Q 032213            1 MSPEWQNS------GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTL   74 (145)
Q Consensus         1 ~aPe~~~~------~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (145)
                      +|||++.+      ..++.++|+||+|++++++++|..||....    .........    ..    ......+.....+
T Consensus       266 ~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~----~~~~~~~i~----~~----~~~~~~~~~~~~~  333 (365)
T 2y7j_A          266 LAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR----QILMLRMIM----EG----QYQFSSPEWDDRS  333 (365)
T ss_dssp             CCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHH----HT----CCCCCHHHHSSSC
T ss_pred             cChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC----HHHHHHHHH----hC----CCCCCCcccccCC
Confidence            57887753      247889999999999999999999986431    111111000    00    0000001111234


Q ss_pred             HHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           75 ETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        75 ~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ..+.+++.+||..+|.+||++.+++.
T Consensus       334 ~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          334 STVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            56889999999999999999999986

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.34  E-value=7.5e-13  Score=89.80  Aligned_cols=89  Identities=16%  Similarity=0.114  Sum_probs=59.4

Q ss_pred             CCCcccc---cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHH
Q 032213            1 MSPEWQN---SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~---~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (145)
                      +|||++.   ...++.++|+||+|++++++++|..|+..............       ..    ...............+
T Consensus       183 ~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~-------~~----~~~~~~~~~~~~~~~~  251 (322)
T 2ycf_A          183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT-------SG----KYNFIPEVWAEVSEKA  251 (322)
T ss_dssp             CCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHH-------HT----CCCCCHHHHTTSCHHH
T ss_pred             cCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHH-------hC----ccccCchhhhhcCHHH
Confidence            5788863   45678899999999999999999999865422211111110       00    0000001112235568


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHH
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+++.+||..||.+||++.+++.
T Consensus       252 ~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          252 LDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHcccCHhhCCCHHHHhh
Confidence            89999999999999999999974

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.34  E-value=5.6e-13  Score=90.01  Aligned_cols=99  Identities=13%  Similarity=0.106  Sum_probs=60.4

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhh------------hCcc-
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKL------------VGED-   66 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~-   66 (145)
                      +|||.+.+ ..++.++|+||||++++++++|..||...........+.... ..........+            ..+. 
T Consensus       191 ~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (320)
T 2i6l_A          191 RSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESI-PVVHEEDRQELLSVIPVYIRNDMTEPHK  269 (320)
T ss_dssp             CCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHS-CCCCHHHHHHHHTTSCHHHHHHTTSCCC
T ss_pred             cCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc-CCCchhhhhhhhhcCcccccccccCCCC
Confidence            47887754 678899999999999999999999987542111111111000 00000000000            0000 


Q ss_pred             --hhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           67 --EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        67 --~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                        ..........+.+++.+||..||.+||++.+++.
T Consensus       270 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          270 PLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             CHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             ChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence              0111223567899999999999999999999976

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.34  E-value=4.3e-13  Score=90.61  Aligned_cols=88  Identities=17%  Similarity=0.208  Sum_probs=56.7

Q ss_pred             CCCcccc-----cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHH
Q 032213            1 MSPEWQN-----SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLE   75 (145)
Q Consensus         1 ~aPe~~~-----~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (145)
                      +|||++.     ...++.++|+|+||++++++++|..|+.......   ......        .. ......+.....+.
T Consensus       191 ~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~--------~~-~~~~~~~~~~~~~~  258 (318)
T 2dyl_A          191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF---EVLTKV--------LQ-EEPPLLPGHMGFSG  258 (318)
T ss_dssp             CCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH---HHHHHH--------HH-SCCCCCCSSSCCCH
T ss_pred             cChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH---HHHHHH--------hc-cCCCCCCccCCCCH
Confidence            5788874     4567889999999999999999999986431111   111000        00 00010111112345


Q ss_pred             HHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           76 TMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        76 ~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+.+++.+||..+|.+||++.++++
T Consensus       259 ~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          259 DFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             HHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhh
Confidence            6889999999999999999999975

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.34  E-value=3.8e-13  Score=92.58  Aligned_cols=89  Identities=15%  Similarity=0.172  Sum_probs=59.7

Q ss_pred             CCCccccc--CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHH
Q 032213            1 MSPEWQNS--GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~--~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (145)
                      +|||++.+  ..++.++||||||++++++++|..||...........+...            +.......+......+.
T Consensus       227 ~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~  294 (355)
T 1vzo_A          227 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRR------------ILKSEPPYPQEMSALAK  294 (355)
T ss_dssp             CCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHH------------HHHCCCCCCTTSCHHHH
T ss_pred             cChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHH------------HhccCCCCCcccCHHHH
Confidence            58898874  34678999999999999999999998643222221111111            11111122333455688


Q ss_pred             HHHHhcccCCCCCCC-----CHHHHHHH
Q 032213           79 RVRLLCIQDEPNLRP-----SMKNVILM  101 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rp-----t~~~v~~~  101 (145)
                      +|+.+||..||.+||     ++.+++..
T Consensus       295 ~li~~~L~~dP~~R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          295 DLIQRLLMKDPKKRLGCGPRDADEIKEH  322 (355)
T ss_dssp             HHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             HHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence            999999999999999     89999864

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.34  E-value=5e-13  Score=98.96  Aligned_cols=84  Identities=17%  Similarity=0.221  Sum_probs=63.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++|+||||++++||++|..||... .   ...+            +..+.......+......+.+|
T Consensus       509 ~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~-~---~~~~------------~~~i~~~~~~~p~~~s~~~~~l  572 (674)
T 3pfq_A          509 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE-D---EDEL------------FQSIMEHNVAYPKSMSKEAVAI  572 (674)
T ss_dssp             CCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS-S---HHHH------------HHHHHSSCCCCCTTSCHHHHHH
T ss_pred             cCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC-C---HHHH------------HHHHHhCCCCCCccCCHHHHHH
Confidence            6899999889999999999999999999999999753 1   1111            1112223233444456678999


Q ss_pred             HHhcccCCCCCCCCH-----HHHHH
Q 032213           81 RLLCIQDEPNLRPSM-----KNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~-----~~v~~  100 (145)
                      +.+||..||.+|+++     .+|+.
T Consensus       573 i~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          573 CKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             HHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             HHHHccCCHHHCCCCCCCcHHHHhc
Confidence            999999999999997     66653

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.34  E-value=7.4e-13  Score=91.62  Aligned_cols=99  Identities=15%  Similarity=0.123  Sum_probs=60.8

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhh--------hh---hCcch-
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN--------KL---VGEDE-   67 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~---~~~~~-   67 (145)
                      +|||++.+ ..++.++|+||+|++++||++|..||...........+.... .......+.        ..   +.... 
T Consensus       196 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~-g~p~~~~~~~~~~~~~~~~~~~~~~~~~  274 (367)
T 2fst_X          196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV-GTPGAELLKKISSESARNYIQSLTQMPK  274 (367)
T ss_dssp             CCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH-CSCCHHHHTTCCCHHHHHHHHTSCCCCC
T ss_pred             cChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh-CCCCHHHHHHhhhHHHHHHHhccCCCCC
Confidence            58998875 678899999999999999999999987542111111111100 000000000        00   00000 


Q ss_pred             ----hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 ----EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 ----~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                          .........+.+|+.+||..||.+||++.+++.
T Consensus       275 ~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~  311 (367)
T 2fst_X          275 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  311 (367)
T ss_dssp             CCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence                001122456889999999999999999999986

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.33  E-value=9.3e-14  Score=95.41  Aligned_cols=83  Identities=18%  Similarity=0.175  Sum_probs=60.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++||++|..||... ..   ..+...            +.......+......+.+|
T Consensus       185 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-~~---~~~~~~------------i~~~~~~~p~~~s~~~~~l  248 (345)
T 1xjd_A          185 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ-DE---EELFHS------------IRMDNPFYPRWLEKEAKDL  248 (345)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-SH---HHHHHH------------HHHCCCCCCTTSCHHHHHH
T ss_pred             CChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC-CH---HHHHHH------------HHhCCCCCCcccCHHHHHH
Confidence            6899998888999999999999999999999998743 11   111111            1111111222345668999


Q ss_pred             HHhcccCCCCCCCCHH-HHH
Q 032213           81 RLLCIQDEPNLRPSMK-NVI   99 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~-~v~   99 (145)
                      +.+||..+|.+||++. +++
T Consensus       249 i~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          249 LVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             HHHHSCSSGGGSBTTBSCGG
T ss_pred             HHHHhcCCHhHcCCChHHHH
Confidence            9999999999999997 664

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.33  E-value=5.6e-13  Score=91.20  Aligned_cols=93  Identities=15%  Similarity=0.234  Sum_probs=59.2

Q ss_pred             CCCcccccC-Cccc-ccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhh----------Ccch-
Q 032213            1 MSPEWQNSG-LITV-KSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLV----------GEDE-   67 (145)
Q Consensus         1 ~aPe~~~~~-~~~~-~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-   67 (145)
                      +|||++.+. .++. ++|+||+|++++++++|..|+.........   ....    .........          .... 
T Consensus       217 ~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~i----~~~~~~~~~~~~~~~~~~~~~~~~  289 (348)
T 2pml_X          217 MPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVEL---FNNI----RTKNIEYPLDRNHFLYPLTNKKST  289 (348)
T ss_dssp             CCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHH---HHHH----TSCCCCCCCSSSSSTTTTCC----
T ss_pred             cCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH---HHHH----hccCcCCccchhhhhccccccccc
Confidence            589998866 5666 999999999999999999998754221111   1100    000000000          0000 


Q ss_pred             hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 ~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .........+.+|+.+||..+|.+||++.+++.
T Consensus       290 ~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          290 CSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             ----CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             cchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            001233567899999999999999999999976

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.33  E-value=1.4e-12  Score=89.80  Aligned_cols=99  Identities=20%  Similarity=0.263  Sum_probs=60.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHH-HH----------------------HHHH-
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWV-YN----------------------CFIA-   56 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~-~~----------------------~~~~-   56 (145)
                      +|||++.+..++.++|+||+|++++++++|..||...... ......... ..                      .... 
T Consensus       197 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (360)
T 3eqc_A          197 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK-ELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPM  275 (360)
T ss_dssp             CCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHH-HHHHHHC------------------------------CC
T ss_pred             ECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcc
Confidence            5899998888999999999999999999999998754111 110000000 00                      0000 


Q ss_pred             ---hHhhhhhCc-chhh-cHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           57 ---KELNKLVGE-DEEV-DLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        57 ---~~~~~~~~~-~~~~-~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                         ..+..+... .... .......+.+|+.+||..||.+|||+.+++.
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  324 (360)
T 3eqc_A          276 AIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  324 (360)
T ss_dssp             CHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             cchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence               000000000 0000 1112456899999999999999999999985

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.33  E-value=4.3e-13  Score=95.73  Aligned_cols=92  Identities=16%  Similarity=0.105  Sum_probs=62.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+ .++.++|+||+|++++++++|..||.... .   ........    ..    ......+.....+..+.+|
T Consensus       195 ~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~-~---~~~~~~i~----~~----~~~~~~~~~~~~s~~~~~l  261 (484)
T 3nyv_A          195 IAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN-E---YDILKKVE----KG----KYTFELPQWKKVSESAKDL  261 (484)
T ss_dssp             CCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS-H---HHHHHHHH----HC----CCCCCSGGGGGSCHHHHHH
T ss_pred             cCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC-H---HHHHHHHH----cC----CCCCCCcccccCCHHHHHH
Confidence            58998865 68999999999999999999999987431 1   11111100    00    0111112222345668999


Q ss_pred             HHhcccCCCCCCCCHHHHHH--Hhhcc
Q 032213           81 RLLCIQDEPNLRPSMKNVIL--MLEGT  105 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~--~L~~~  105 (145)
                      +.+||..+|.+|||+.+++.  .+...
T Consensus       262 i~~~L~~dp~~R~s~~e~l~h~~~~~~  288 (484)
T 3nyv_A          262 IRKMLTYVPSMRISARDALDHEWIQTY  288 (484)
T ss_dssp             HHHHTCSSGGGSCCHHHHHTSHHHHHH
T ss_pred             HHHHCCCChhHCcCHHHHhhChhhccc
Confidence            99999999999999999986  44443

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.33  E-value=2.8e-13  Score=91.87  Aligned_cols=99  Identities=13%  Similarity=0.148  Sum_probs=59.7

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhh---------hCcc----
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKL---------VGED----   66 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~----   66 (145)
                      +|||++.+ ..++.++|+||+|++++++++|..||...........+.... .......+...         +...    
T Consensus       175 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (317)
T 2pmi_A          175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIM-GTPNESLWPSVTKLPKYNPNIQQRPPRD  253 (317)
T ss_dssp             CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH-CSCCTTTCGGGGGCTTCCTTCCCCCCCC
T ss_pred             cCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh-CCCChhHhhhhhhhhhcccccccccchh
Confidence            58998875 458899999999999999999999987541111111111000 00000000000         0000    


Q ss_pred             ------hhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           67 ------EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        67 ------~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                            ..........+.+|+.+||..||.+||++.+++.
T Consensus       254 ~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          254 LRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             SHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence                  0001122456899999999999999999999975

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.33  E-value=3.9e-13  Score=92.30  Aligned_cols=92  Identities=14%  Similarity=0.221  Sum_probs=60.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhH-hHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVV-LLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|+||+|++++||++|..||.......... ......        ...+.......+......+.+
T Consensus       177 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~--------~~~i~~~~~~~p~~~s~~~~~  248 (345)
T 3a8x_A          177 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL--------FQVILEKQIRIPRSLSVKAAS  248 (345)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHH--------HHHHHHCCCCCCTTSCHHHHH
T ss_pred             cCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHH--------HHHHHcCCCCCCCCCCHHHHH
Confidence            68999988889999999999999999999999986431110000 000000        011111112233344567899


Q ss_pred             HHHhcccCCCCCCCCH------HHHHH
Q 032213           80 VRLLCIQDEPNLRPSM------KNVIL  100 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~------~~v~~  100 (145)
                      |+.+||..||.+||++      .+++.
T Consensus       249 li~~lL~~dP~~R~~~~~~~~~~~i~~  275 (345)
T 3a8x_A          249 VLKSFLNKDPKERLGCHPQTGFADIQG  275 (345)
T ss_dssp             HHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred             HHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence            9999999999999995      56653

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.33  E-value=1.6e-12  Score=90.92  Aligned_cols=37  Identities=19%  Similarity=0.350  Sum_probs=32.1

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCC
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVN   37 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~   37 (145)
                      +|||++.+ ..++.++||||+||++++|++|..||...
T Consensus       202 ~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~  239 (405)
T 3rgf_A          202 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  239 (405)
T ss_dssp             CCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred             cCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence            58998876 45899999999999999999999998643

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.32  E-value=5.5e-13  Score=92.60  Aligned_cols=99  Identities=17%  Similarity=0.191  Sum_probs=61.5

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhh------------hCcc-
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKL------------VGED-   66 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~-   66 (145)
                      +|||++.+. .++.++|+||+|++++++++|..||...........+...... .....+...            .... 
T Consensus       208 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~-p~~~~~~~~~~~~~~~~~~~~~~~~~  286 (383)
T 3eb0_A          208 RAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGT-PTKEQMIRMNPHYTEVRFPTLKAKDW  286 (383)
T ss_dssp             CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC-CCHHHHHHHCTTC--CCCCCCCCCCH
T ss_pred             cCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC-CCHHHHHHhCcccccccCCccCcccH
Confidence            589988754 4899999999999999999999998754222111111111000 000000000            0000 


Q ss_pred             -hhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           67 -EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        67 -~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                       ...+...+..+.+|+.+||..+|.+|||+.+++.
T Consensus       287 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (383)
T 3eb0_A          287 RKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA  321 (383)
T ss_dssp             HHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence             0112223556899999999999999999999985

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.32  E-value=1.5e-13  Score=93.24  Aligned_cols=78  Identities=21%  Similarity=0.402  Sum_probs=56.9

Q ss_pred             CCCcccccCCc-ccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLI-TVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~-~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..+ +.++|+||||++++++++|..|+...    .  ..            ..    .....+...+..+.+
T Consensus       215 ~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~----~--~~------------~~----~~~~~~~~~~~~~~~  272 (320)
T 3a99_A          215 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD----E--EI------------IR----GQVFFRQRVSSECQH  272 (320)
T ss_dssp             SCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH----H--HH------------HH----CCCCCSSCCCHHHHH
T ss_pred             CChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCCh----h--hh------------hc----ccccccccCCHHHHH
Confidence            57888876555 67899999999999999999998632    0  00            00    000111122456889


Q ss_pred             HHHhcccCCCCCCCCHHHHHH
Q 032213           80 VRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      |+.+||..+|.+||++.+++.
T Consensus       273 li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          273 LIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHccCChhhCcCHHHHhc
Confidence            999999999999999999976

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.32  E-value=7e-13  Score=92.49  Aligned_cols=99  Identities=14%  Similarity=0.135  Sum_probs=61.7

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhh----hhhC----cch----
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN----KLVG----EDE----   67 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~----   67 (145)
                      +|||++.+. .++.++|+||+|++++|+++|..||...........+..... ......+.    ....    ...    
T Consensus       208 ~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g-~p~~~~~~~~~~~~~~~~~~~~~~~~~  286 (394)
T 4e7w_A          208 RAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLG-TPSREQIKTMNPNYMEHKFPQIRPHPF  286 (394)
T ss_dssp             CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC-CCCHHHHHHHCGGGSSSCCCCCCCCCH
T ss_pred             cCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC-CCCHHHHHhhChhhhhhccccccCCcH
Confidence            589988654 589999999999999999999999875422111111111100 00000000    0000    000    


Q ss_pred             --hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 --EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 --~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                        ..+......+.+|+.+||..||.+||++.+++.
T Consensus       287 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (394)
T 4e7w_A          287 SKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC  321 (394)
T ss_dssp             HHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence              111123557899999999999999999999986

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.32  E-value=5.1e-13  Score=89.15  Aligned_cols=87  Identities=20%  Similarity=0.311  Sum_probs=57.4

Q ss_pred             CCCccc----ccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHH
Q 032213            1 MSPEWQ----NSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLET   76 (145)
Q Consensus         1 ~aPe~~----~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (145)
                      +|||++    .+..++.++|+||+|++++++++|..|+........  .+...         .......  ......+..
T Consensus       176 ~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~---------~~~~~~~--~~~~~~~~~  242 (290)
T 3fme_A          176 MAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ--QLKQV---------VEEPSPQ--LPADKFSAE  242 (290)
T ss_dssp             SCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH--HHHHH---------HHSCCCC--CCTTTSCHH
T ss_pred             cChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHH--HHHHH---------hccCCCC--cccccCCHH
Confidence            578885    455688899999999999999999999864311111  11000         0000000  011123456


Q ss_pred             HHHHHHhcccCCCCCCCCHHHHHH
Q 032213           77 MVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        77 ~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+++.+||..+|.+||++.++++
T Consensus       243 ~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          243 FVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHhhcChhhCcCHHHHHh
Confidence            899999999999999999999976

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.32  E-value=7.5e-13  Score=88.43  Aligned_cols=87  Identities=17%  Similarity=0.110  Sum_probs=58.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+ .++.++|+||+|++++++++|..|+... ..   ..+....    ...    ......+.....+..+.++
T Consensus       190 ~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~-~~---~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~l  256 (287)
T 2wei_A          190 IAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK-NE---YDILKRV----ETG----KYAFDLPQWRTISDDAKDL  256 (287)
T ss_dssp             CCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS-SH---HHHHHHH----HHC----CCCCCSGGGTTSCHHHHHH
T ss_pred             cChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCC-CH---HHHHHHH----HcC----CCCCCchhhhhcCHHHHHH
Confidence            57888764 4889999999999999999999998643 11   1111100    000    0011111112235568999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.+++.
T Consensus       257 i~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          257 IRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             HHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHcccChhhCcCHHHHhc
Confidence            99999999999999999986

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.32  E-value=3.3e-13  Score=89.78  Aligned_cols=82  Identities=10%  Similarity=0.117  Sum_probs=56.5

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+. .++.++|+||+|++++++++|..++...   .....+        ...    ..   ...+......+.+
T Consensus       197 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~---~~~~~~--------~~~----~~---~~~~~~~~~~~~~  258 (289)
T 1x8b_A          197 LANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG---DQWHEI--------RQG----RL---PRIPQVLSQEFTE  258 (289)
T ss_dssp             CCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS---HHHHHH--------HTT----CC---CCCSSCCCHHHHH
T ss_pred             cChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch---hHHHHH--------HcC----CC---CCCCcccCHHHHH
Confidence            588888755 5668999999999999999888765422   100000        000    00   1112233556899


Q ss_pred             HHHhcccCCCCCCCCHHHHHH
Q 032213           80 VRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ++.+||..||.+||++.++++
T Consensus       259 li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          259 LLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHhCCCcccCCCHHHHhh
Confidence            999999999999999999875

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.32  E-value=4.9e-13  Score=90.71  Aligned_cols=86  Identities=15%  Similarity=0.176  Sum_probs=56.6

Q ss_pred             CCCcccc-----cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHH
Q 032213            1 MSPEWQN-----SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLE   75 (145)
Q Consensus         1 ~aPe~~~-----~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (145)
                      +|||++.     +..++.++|+|+||++++++++|..|+...... ..  +. .    ....    . .+. ......+.
T Consensus       196 ~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~--~~-~----~~~~----~-~~~-~~~~~~~~  261 (326)
T 2x7f_A          196 MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM-RA--LF-L----IPRN----P-APR-LKSKKWSK  261 (326)
T ss_dssp             CCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-HH--HH-H----HHHS----C-CCC-CSCSCSCH
T ss_pred             cChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH-HH--HH-H----hhcC----c-ccc-CCccccCH
Confidence            5788876     456888999999999999999999998643111 00  00 0    0000    0 000 00112245


Q ss_pred             HHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           76 TMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        76 ~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+.+++.+||..+|.+||++.+++.
T Consensus       262 ~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          262 KFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHhccChhhCCCHHHHhh
Confidence            6889999999999999999999986

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.32  E-value=1.6e-12  Score=89.42  Aligned_cols=100  Identities=15%  Similarity=0.101  Sum_probs=61.4

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHH-------HHHHhHhhhhh----Ccch-
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYN-------CFIAKELNKLV----GEDE-   67 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~----~~~~-   67 (145)
                      +|||++.+ ..++.++|+||+|++++++++|..|+...........+......       ...........    .... 
T Consensus       200 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (362)
T 3pg1_A          200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPA  279 (362)
T ss_dssp             CCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCC
T ss_pred             cCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCCh
Confidence            58898875 67889999999999999999999998754211111111110000       00000000000    0000 


Q ss_pred             ----hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 ----EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 ----~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                          .........+.+|+.+||..+|.+||++.++++
T Consensus       280 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  316 (362)
T 3pg1_A          280 RAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR  316 (362)
T ss_dssp             CCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence                111223456889999999999999999999986

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.31  E-value=6.1e-12  Score=86.36  Aligned_cols=99  Identities=12%  Similarity=0.095  Sum_probs=60.9

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHH------------hHhhhhh---C
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIA------------KELNKLV---G   64 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~---~   64 (145)
                      +|||++.+ ..++.++|+||+|++++++++|..||...........+.... .....            ..+..+.   .
T Consensus       190 ~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (353)
T 3coi_A          190 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVT-GVPGTEFVQKLNDKAAKSYIQSLPQTPR  268 (353)
T ss_dssp             SCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHH-CBCCHHHHTTCSCHHHHHHHHTSCBCSS
T ss_pred             CCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh-CCCCHHHHHHHhhHHHHHHHHhCcCCCC
Confidence            58898875 678899999999999999999999987541111110110000 00000            0000000   0


Q ss_pred             cc-hhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           65 ED-EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        65 ~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .. ..........+.+|+.+||..||.+||++.+++.
T Consensus       269 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          269 KDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  305 (353)
T ss_dssp             CCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             ccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            00 0112234567899999999999999999999986

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.31  E-value=2e-13  Score=93.02  Aligned_cols=100  Identities=14%  Similarity=0.211  Sum_probs=61.0

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHH-------HHHHHHh-HhhhhhCcc-----
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWV-------YNCFIAK-ELNKLVGED-----   66 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~~~~~~-----   66 (145)
                      +|||++.+. .++.++|+||+|++++++++|..||...........+....       ....... .......+.     
T Consensus       191 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (331)
T 4aaa_A          191 RAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKERE  270 (331)
T ss_dssp             CCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCC
T ss_pred             cCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccc
Confidence            588988754 68899999999999999999999987542211111111100       0000000 000000000     


Q ss_pred             --hhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           67 --EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        67 --~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                        ..........+.+|+.+||..||.+||++.++++
T Consensus       271 ~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          271 PLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             CHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             hhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence              0111123567899999999999999999999875

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.31  E-value=9.4e-13  Score=89.69  Aligned_cols=99  Identities=12%  Similarity=0.088  Sum_probs=59.6

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhh---------h----Ccc
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKL---------V----GED   66 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~----~~~   66 (145)
                      +|||++.+. .++.++||||+|++++++++|..||...........+.... .......+...         .    ...
T Consensus       204 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (329)
T 3gbz_A          204 RPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVL-GLPDDTTWPGVTALPDWKQSFPKFRGKT  282 (329)
T ss_dssp             CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH-CCCCTTTSTTGGGSTTCCTTCCCCCCCC
T ss_pred             cCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHh-CCCchhhhhhhhhhhhhhhhhhhhcccc
Confidence            589988764 48999999999999999999999986541111111111000 00000000000         0    000


Q ss_pred             h--hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           67 E--EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        67 ~--~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .  ..+......+.+|+.+||..||.+||++.++++
T Consensus       283 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          283 LKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             HHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence            0  001113456789999999999999999999976

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.30  E-value=7e-13  Score=89.49  Aligned_cols=79  Identities=23%  Similarity=0.494  Sum_probs=57.1

Q ss_pred             CCCcccccCCc-ccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLI-TVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~-~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..+ +.++|+||+|++++++++|..|+...    .  ..            .    ......+......+.+
T Consensus       205 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~----~--~~------------~----~~~~~~~~~~~~~~~~  262 (312)
T 2iwi_A          205 SPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD----Q--EI------------L----EAELHFPAHVSPDCCA  262 (312)
T ss_dssp             SCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH----H--HH------------H----HTCCCCCTTSCHHHHH
T ss_pred             cCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh----H--HH------------h----hhccCCcccCCHHHHH
Confidence            47888775555 45899999999999999999988632    0  00            0    0011112233456889


Q ss_pred             HHHhcccCCCCCCCCHHHHHHH
Q 032213           80 VRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      ++.+||..+|.+||++.+++..
T Consensus       263 li~~~l~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          263 LIRRCLAPKPSSRPSLEEILLD  284 (312)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHHS
T ss_pred             HHHHHccCChhhCcCHHHHhcC
Confidence            9999999999999999999863

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.30  E-value=1.3e-12  Score=93.60  Aligned_cols=87  Identities=18%  Similarity=0.097  Sum_probs=59.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++. ..++.++|+||+|++++++++|..||.... .   ..+.....    ..    ......+.....+..+.+|
T Consensus       205 ~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~---~~~~~~i~----~~----~~~~~~~~~~~~s~~~~~l  271 (494)
T 3lij_A          205 IAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQT-D---QEILRKVE----KG----KYTFDSPEWKNVSEGAKDL  271 (494)
T ss_dssp             CCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-H---HHHHHHHH----HT----CCCCCSGGGTTSCHHHHHH
T ss_pred             eCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCC-H---HHHHHHHH----hC----CCCCCchhcccCCHHHHHH
Confidence            5899875 468999999999999999999999987541 1   11111100    00    0000011112235568899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+|||+.+++.
T Consensus       272 i~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          272 IKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             HHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHCCCChhhCccHHHHhc
Confidence            99999999999999999985

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.30  E-value=2.2e-13  Score=92.58  Aligned_cols=85  Identities=26%  Similarity=0.395  Sum_probs=50.8

Q ss_pred             CCCccc----ccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcc---h--hhcH
Q 032213            1 MSPEWQ----NSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGED---E--EVDL   71 (145)
Q Consensus         1 ~aPe~~----~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~   71 (145)
                      +|||++    .+..++.++|+||||++++++++|..|+........               .+..+....   .  ....
T Consensus       192 ~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~  256 (327)
T 3aln_A          192 MAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD---------------QLTQVVKGDPPQLSNSEER  256 (327)
T ss_dssp             --------------CCSHHHHHHHHHHHHHHHHSCCCSSCC----------------------CCCCCSCCCCCCCCSSC
T ss_pred             cCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH---------------HHHHHhcCCCCCCCCcccc
Confidence            589988    455688999999999999999999999864311000               000011100   0  0111


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           72 RTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        72 ~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .....+.+|+.+||..+|.+||++.+++.
T Consensus       257 ~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          257 EFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             cCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            23456899999999999999999999975

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.30  E-value=2.2e-12  Score=89.78  Aligned_cols=87  Identities=21%  Similarity=0.196  Sum_probs=59.3

Q ss_pred             CCCccccc---CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHH
Q 032213            1 MSPEWQNS---GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~~---~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (145)
                      +|||++..   ..++.++|+||+|+++++|++|..||...... ....+...            +.......+......+
T Consensus       181 ~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~-~~~~~~~~------------~~~~~~~~p~~~s~~~  247 (384)
T 4fr4_A          181 MAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST-SSKEIVHT------------FETTVVTYPSAWSQEM  247 (384)
T ss_dssp             CCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS-CHHHHHHH------------HHHCCCCCCTTSCHHH
T ss_pred             cCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc-cHHHHHHH------------HhhcccCCCCcCCHHH
Confidence            68999863   45889999999999999999999999743111 11111110            0011112233345678


Q ss_pred             HHHHHhcccCCCCCCCC-HHHHHH
Q 032213           78 VRVRLLCIQDEPNLRPS-MKNVIL  100 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt-~~~v~~  100 (145)
                      .+|+.+||..+|.+||+ +.+++.
T Consensus       248 ~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          248 VSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             HHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             HHHHHHHhcCCHhHhcccHHHHHc
Confidence            99999999999999998 666653

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.30  E-value=1.3e-12  Score=87.23  Aligned_cols=86  Identities=21%  Similarity=0.182  Sum_probs=56.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++. ..++.++|+||+|++++++++|..||... ...   ......       ... ...... ........+.+|
T Consensus       193 ~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~-~~~---~~~~~~-------~~~-~~~~~~-~~~~~~~~~~~l  258 (285)
T 3is5_A          193 MAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGT-SLE---EVQQKA-------TYK-EPNYAV-ECRPLTPQAVDL  258 (285)
T ss_dssp             CCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCS-SHH---HHHHHH-------HHC-CCCCCC---CCCCHHHHHH
T ss_pred             CChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCC-CHH---HHHhhh-------ccC-Cccccc-ccCcCCHHHHHH
Confidence            5788775 46788999999999999999999998743 111   110000       000 000000 000124467899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..+|.+||++.+++.
T Consensus       259 i~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          259 LKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             HHHHTCSCTTTSCCHHHHHT
T ss_pred             HHHHccCChhhCcCHHHHhc
Confidence            99999999999999999975

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.30  E-value=6e-13  Score=91.28  Aligned_cols=100  Identities=10%  Similarity=0.040  Sum_probs=59.5

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhh-----h------Ccch-
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKL-----V------GEDE-   67 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~------~~~~-   67 (145)
                      +|||++.+ ..++.++|+||+|++++++++|..|+.... ...................+...     .      .... 
T Consensus       195 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (351)
T 3mi9_A          195 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT-EQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKR  273 (351)
T ss_dssp             CCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCC
T ss_pred             cCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHhCCCChhhccccccchhhccccccccccc
Confidence            58998865 457899999999999999999999987541 11111111110000000000000     0      0000 


Q ss_pred             hhcH-----HHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 032213           68 EVDL-----RTLETMVRVRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        68 ~~~~-----~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      ....     .....+.+|+.+||..||.+||++.++++.
T Consensus       274 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          274 KVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  312 (351)
T ss_dssp             CHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence            0000     013457899999999999999999999863

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.29  E-value=4e-12  Score=89.71  Aligned_cols=87  Identities=18%  Similarity=0.165  Sum_probs=56.3

Q ss_pred             CCCcccc---cCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHH
Q 032213            1 MSPEWQN---SGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLET   76 (145)
Q Consensus         1 ~aPe~~~---~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (145)
                      +|||++.   ...++.++||||+||+++|+++ |..|+...  ........           ..................
T Consensus       193 ~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~--~~~~~~~~-----------~~~~~~~~~~~~~~~~~~  259 (432)
T 3p23_A          193 IAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKS--LQRQANIL-----------LGACSLDCLHPEKHEDVI  259 (432)
T ss_dssp             CCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBST--TTHHHHHH-----------TTCCCCTTSCTTCHHHHH
T ss_pred             cChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchh--hHHHHHHH-----------hccCCccccCccccccHH
Confidence            5899987   4556779999999999999999 77777532  11110000           000000001112233455


Q ss_pred             HHHHHHhcccCCCCCCCCHHHHHH
Q 032213           77 MVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        77 ~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+|+.+||..||.+||++.+++.
T Consensus       260 ~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          260 ARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHhCCHhhCCCHHHHHh
Confidence            789999999999999999999983

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.29  E-value=1e-12  Score=95.00  Aligned_cols=87  Identities=16%  Similarity=0.208  Sum_probs=61.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+||+++||++|..||...........+...            +.......+...+..+.+|
T Consensus       356 ~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~------------i~~~~~~~p~~~s~~~~~l  423 (543)
T 3c4z_A          356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR------------VLEQAVTYPDKFSPASKDF  423 (543)
T ss_dssp             SCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHH------------HHHCCCCCCTTSCHHHHHH
T ss_pred             cChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHH------------HhhcccCCCcccCHHHHHH
Confidence            6899998888999999999999999999999999754221111111111            1111112233445678999


Q ss_pred             HHhcccCCCCCCCCH-----HHHH
Q 032213           81 RLLCIQDEPNLRPSM-----KNVI   99 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~-----~~v~   99 (145)
                      +.+||..+|.+||++     .+++
T Consensus       424 i~~lL~~dP~~R~~~~~~~a~ei~  447 (543)
T 3c4z_A          424 CEALLQKDPEKRLGFRDGSCDGLR  447 (543)
T ss_dssp             HHHHSCSSGGGSCCCBTTBSHHHH
T ss_pred             HHHhccCCHhHCCCCcccCHHHHH
Confidence            999999999999975     5665

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.28  E-value=6.7e-12  Score=86.00  Aligned_cols=100  Identities=17%  Similarity=0.121  Sum_probs=60.1

Q ss_pred             CCCcccc-cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHH------------HHhHhhhhh---C
Q 032213            1 MSPEWQN-SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCF------------IAKELNKLV---G   64 (145)
Q Consensus         1 ~aPe~~~-~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~---~   64 (145)
                      +|||++. +..++.++|+||+|++++++++|..||...........+........            ....+..+.   .
T Consensus       189 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (353)
T 2b9h_A          189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPA  268 (353)
T ss_dssp             CCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCC
T ss_pred             cCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCC
Confidence            5788765 46788999999999999999999999875411111100000000000            000000000   0


Q ss_pred             cch-hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           65 EDE-EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        65 ~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ... .........+.+|+.+||..||.+||++.++++
T Consensus       269 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          269 APLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             CCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            000 111233556889999999999999999999986

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.28  E-value=1.6e-12  Score=93.27  Aligned_cols=91  Identities=16%  Similarity=0.107  Sum_probs=61.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++. +.++.++|+||+|++++++++|..||.... ..   .+.....    ..    ............+..+.+|
T Consensus       215 ~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~---~~~~~i~----~~----~~~~~~~~~~~~s~~~~~l  281 (504)
T 3q5i_A          215 IAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQN-DQ---DIIKKVE----KG----KYYFDFNDWKNISDEAKEL  281 (504)
T ss_dssp             CCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-HH---HHHHHHH----HC----CCCCCHHHHTTSCHHHHHH
T ss_pred             CCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCC-HH---HHHHHHH----cC----CCCCCccccCCCCHHHHHH
Confidence            5889876 468999999999999999999999987541 11   1111100    00    0000011112235568999


Q ss_pred             HHhcccCCCCCCCCHHHHHH--Hhhc
Q 032213           81 RLLCIQDEPNLRPSMKNVIL--MLEG  104 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~--~L~~  104 (145)
                      +.+||..+|.+|||+.+++.  .+..
T Consensus       282 i~~~L~~dp~~R~t~~e~l~h~~~~~  307 (504)
T 3q5i_A          282 IKLMLTYDYNKRCTAEEALNSRWIKK  307 (504)
T ss_dssp             HHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred             HHHHcCCChhHCCCHHHHhcCHhhhh
Confidence            99999999999999999985  4544

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.28  E-value=9.7e-13  Score=90.19  Aligned_cols=97  Identities=11%  Similarity=0.119  Sum_probs=59.7

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHH---hHhhhhhC--------cchh
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIA---KELNKLVG--------EDEE   68 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--------~~~~   68 (145)
                      +|||++.+. .++.++|+||+|++++++++|..|+.......    ...........   ..+.....        ....
T Consensus       179 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (346)
T 1ua2_A          179 RAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD----QLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPG  254 (346)
T ss_dssp             CCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCC
T ss_pred             cCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH----HHHHHHHHcCCCChhhhhhhccCcccccccccCC
Confidence            588988653 47889999999999999999998876431111    11111100000   00000000        0000


Q ss_pred             -----hcHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 032213           69 -----VDLRTLETMVRVRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        69 -----~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                           ........+.+|+.+||..||.+|||+.++++.
T Consensus       255 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  292 (346)
T 1ua2_A          255 IPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  292 (346)
T ss_dssp             CCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             CChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence                 011234678999999999999999999999874

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.27  E-value=4.6e-13  Score=89.83  Aligned_cols=92  Identities=21%  Similarity=0.387  Sum_probs=58.2

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhC--cchhhcHHHHHHH
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVG--EDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~   77 (145)
                      +|||++.+ ..++.++|+|++|++++++++|..|+............       . .........  ............+
T Consensus       193 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~  264 (303)
T 2vwi_A          193 MAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT-------L-QNDPPSLETGVQDKEMLKKYGKSF  264 (303)
T ss_dssp             CCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHH-------H-TSSCCCTTC-----CCCCCCCHHH
T ss_pred             cCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHH-------h-ccCCCccccccccchhhhhhhHHH
Confidence            47887764 45788999999999999999999998754111111000       0 000000000  0000111224568


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHH
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+++.+||..+|.+||++.++++
T Consensus       265 ~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          265 RKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             HHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHccCChhhCcCHHHHhh
Confidence            89999999999999999999976

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.27  E-value=1.4e-12  Score=87.35  Aligned_cols=88  Identities=13%  Similarity=0.112  Sum_probs=58.2

Q ss_pred             CCCcccc------cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHH
Q 032213            1 MSPEWQN------SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTL   74 (145)
Q Consensus         1 ~aPe~~~------~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (145)
                      +|||++.      ...++.++|+|++|++++++++|..|+.... .   .......        .........+.....+
T Consensus       190 ~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-~---~~~~~~~--------~~~~~~~~~~~~~~~~  257 (298)
T 1phk_A          190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK-Q---MLMLRMI--------MSGNYQFGSPEWDDYS  257 (298)
T ss_dssp             CCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-H---HHHHHHH--------HHTCCCCCTTTGGGSC
T ss_pred             cCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc-H---HHHHHHH--------hcCCcccCcccccccC
Confidence            4778764      3457889999999999999999999986431 1   1111000        0000011111112335


Q ss_pred             HHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           75 ETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        75 ~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ..+.+++.+||..+|.+||++.+++.
T Consensus       258 ~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          258 DTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHHccCCcccCCCHHHHHh
Confidence            56899999999999999999999975

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.27  E-value=1.1e-12  Score=95.26  Aligned_cols=88  Identities=20%  Similarity=0.205  Sum_probs=62.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+..++.++|+||+|++++||++|..||...........+....            .......+......+.+|
T Consensus       352 ~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i------------~~~~~~~p~~~s~~~~dL  419 (576)
T 2acx_A          352 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV------------KEVPEEYSERFSPQARSL  419 (576)
T ss_dssp             CCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHH------------HHCCCCCCTTSCHHHHHH
T ss_pred             cCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHh------------hcccccCCccCCHHHHHH
Confidence            68999988889999999999999999999999997542211111111110            001111223345678999


Q ss_pred             HHhcccCCCCCCC-----CHHHHHH
Q 032213           81 RLLCIQDEPNLRP-----SMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rp-----t~~~v~~  100 (145)
                      +.+||..||.+||     ++.+++.
T Consensus       420 I~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          420 CSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             HHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             HHHhccCCHHHcCCCCCCCHHHHHh
Confidence            9999999999999     7788874

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.26  E-value=1.9e-11  Score=86.65  Aligned_cols=27  Identities=11%  Similarity=0.146  Sum_probs=24.9

Q ss_pred             HHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           74 LETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        74 ~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ...+.+|+.+||..||.+|||+.+++.
T Consensus       370 s~~~~dLl~~mL~~dP~~R~t~~e~L~  396 (458)
T 3rp9_A          370 SADAIHLLKRMLVFNPNKRITINECLA  396 (458)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CHHHHHHHHHHhccCccccCCHHHHhc
Confidence            556889999999999999999999987

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.19  E-value=1.2e-11  Score=82.87  Aligned_cols=85  Identities=20%  Similarity=0.391  Sum_probs=54.8

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhh-hCcchhhcHHHHHHHH
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKL-VGEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   78 (145)
                      +|||++.+. .++.++|+||+|++++++++   |+...   ........         .+... .......+......+.
T Consensus       197 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~---~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~  261 (303)
T 1zy4_A          197 VATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG---MERVNILK---------KLRSVSIEFPPDFDDNKMKVEK  261 (303)
T ss_dssp             SCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH---HHHHHHHH---------HHHSTTCCCCTTCCTTTSHHHH
T ss_pred             cCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc---hhHHHHHH---------hccccccccCccccccchHHHH
Confidence            578888643 68899999999999999997   33311   11111110         01000 0001112233455688


Q ss_pred             HHHHhcccCCCCCCCCHHHHHH
Q 032213           79 RVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +++.+||..||.+||++.+++.
T Consensus       262 ~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          262 KIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHhcCcccCcCHHHHhC
Confidence            9999999999999999999986

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.16  E-value=2.4e-11  Score=85.67  Aligned_cols=34  Identities=21%  Similarity=0.261  Sum_probs=27.7

Q ss_pred             CCCccc-ccCCcccccchhhHHHHHHHHHhCCCCC
Q 032213            1 MSPEWQ-NSGLITVKSDVYSFGVVLLEIVCCRSNF   34 (145)
Q Consensus         1 ~aPe~~-~~~~~~~~~dv~s~g~v~~el~~g~~~~   34 (145)
                      +|||++ ....++.++|+||+||+++||++|..|+
T Consensus       218 ~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~  252 (432)
T 3n9x_A          218 RAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH  252 (432)
T ss_dssp             CCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred             cCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence            589976 4666899999999999999999854443

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.16  E-value=4.6e-12  Score=88.86  Aligned_cols=88  Identities=17%  Similarity=0.129  Sum_probs=58.8

Q ss_pred             CCCcccccCC----cccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHH
Q 032213            1 MSPEWQNSGL----ITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLET   76 (145)
Q Consensus         1 ~aPe~~~~~~----~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (145)
                      ||||++.+..    ++.++|+||+|++++||++|..||...........+..+        .. .+.-   +........
T Consensus       236 ~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~--------~~-~~~~---p~~~~~s~~  303 (410)
T 3v8s_A          236 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH--------KN-SLTF---PDDNDISKE  303 (410)
T ss_dssp             CCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTH--------HH-HCCC---CTTCCCCHH
T ss_pred             cCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhc--------cc-cccC---CCcccccHH
Confidence            6899887554    788999999999999999999999754111111111000        00 0000   111123456


Q ss_pred             HHHHHHhcccCCCCC--CCCHHHHHH
Q 032213           77 MVRVRLLCIQDEPNL--RPSMKNVIL  100 (145)
Q Consensus        77 ~~~l~~~cl~~~p~~--Rpt~~~v~~  100 (145)
                      +.+|+.+||..+|.+  |+++.+++.
T Consensus       304 ~~~li~~lL~~~~~rlgR~~~~ei~~  329 (410)
T 3v8s_A          304 AKNLICAFLTDREVRLGRNGVEEIKR  329 (410)
T ss_dssp             HHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred             HHHHHHHHccChhhhCCCCCHHHHhc
Confidence            889999999988888  999999986

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.13  E-value=5.7e-12  Score=84.37  Aligned_cols=90  Identities=11%  Similarity=0.145  Sum_probs=57.8

Q ss_pred             CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHHHHhcccCCC
Q 032213           10 LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRVRLLCIQDEP   89 (145)
Q Consensus        10 ~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   89 (145)
                      .++.++|+||||++++++++|..||.............         .................+..+.+++.+||+.||
T Consensus       178 ~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP  248 (286)
T 3uqc_A          178 DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE---------RDTAGQPIEPADIDRDIPFQISAVAARSVQGDG  248 (286)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECC---------BCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTS
T ss_pred             CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH---------HHhccCCCChhhcccCCCHHHHHHHHHHcccCC
Confidence            46789999999999999999999987542111000000         000000000001122335568999999999999


Q ss_pred             CCCCCHHHHHHHhhccCCCC
Q 032213           90 NLRPSMKNVILMLEGTMEIP  109 (145)
Q Consensus        90 ~~Rpt~~~v~~~L~~~~~~~  109 (145)
                      .+| ++.++++.|+.+....
T Consensus       249 ~~R-s~~el~~~L~~~~~~~  267 (286)
T 3uqc_A          249 GIR-SASTLLNLMQQATAVA  267 (286)
T ss_dssp             SCC-CHHHHHHHHHHHHC--
T ss_pred             ccC-CHHHHHHHHHHHhccC
Confidence            999 9999999999866543

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.12  E-value=2.6e-11  Score=85.11  Aligned_cols=88  Identities=17%  Similarity=0.179  Sum_probs=56.8

Q ss_pred             CCCcccc-------cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHH
Q 032213            1 MSPEWQN-------SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRT   73 (145)
Q Consensus         1 ~aPe~~~-------~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (145)
                      ||||++.       ...++.++|+||+||+++||++|..||...........+..+      ...   +.-+  ..+...
T Consensus       230 ~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~------~~~---~~~p--~~~~~~  298 (412)
T 2vd5_A          230 LSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHY------KEH---LSLP--LVDEGV  298 (412)
T ss_dssp             CCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTH------HHH---CCCC------CC
T ss_pred             CCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhc------ccC---cCCC--ccccCC
Confidence            6889886       356889999999999999999999999754111111111100      000   0000  011233


Q ss_pred             HHHHHHHHHhcccCCCCCC---CCHHHHHH
Q 032213           74 LETMVRVRLLCIQDEPNLR---PSMKNVIL  100 (145)
Q Consensus        74 ~~~~~~l~~~cl~~~p~~R---pt~~~v~~  100 (145)
                      +..+.+|+.+||. +|.+|   +++.+++.
T Consensus       299 s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~  327 (412)
T 2vd5_A          299 PEEARDFIQRLLC-PPETRLGRGGAGDFRT  327 (412)
T ss_dssp             CHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred             CHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence            5678999999999 99887   58999875

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.11  E-value=1.4e-11  Score=82.78  Aligned_cols=81  Identities=16%  Similarity=0.185  Sum_probs=52.6

Q ss_pred             cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhc----HHHHHHHHHHHHh
Q 032213            8 SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVD----LRTLETMVRVRLL   83 (145)
Q Consensus         8 ~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~   83 (145)
                      +..++.++|+||+|++++++++|..||.........            ......+.......+    ...+..+.+++.+
T Consensus       172 ~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  239 (299)
T 3m2w_A          172 GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS------------PGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN  239 (299)
T ss_dssp             TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------------------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHH
T ss_pred             cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh------------HHHHHHHhhccccCCchhcccCCHHHHHHHHH
Confidence            456788999999999999999999998643110000            000000000000111    2235678999999


Q ss_pred             cccCCCCCCCCHHHHHH
Q 032213           84 CIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        84 cl~~~p~~Rpt~~~v~~  100 (145)
                      ||..+|.+||++.+++.
T Consensus       240 ~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          240 LLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             HTCSSTTTSCCHHHHHT
T ss_pred             HcccChhhCCCHHHHhc
Confidence            99999999999999986

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.10  E-value=1.3e-11  Score=87.29  Aligned_cols=89  Identities=13%  Similarity=0.119  Sum_probs=58.3

Q ss_pred             CCCcccc-----cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHH
Q 032213            1 MSPEWQN-----SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLE   75 (145)
Q Consensus         1 ~aPe~~~-----~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (145)
                      ||||++.     ...++.++|+||+|++++||++|..||...........+..+.      ..+  .++.   .......
T Consensus       243 ~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~------~~~--~~p~---~~~~~s~  311 (437)
T 4aw2_A          243 ISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK------ERF--QFPT---QVTDVSE  311 (437)
T ss_dssp             CCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH------HHC--CCCS---SCCCSCH
T ss_pred             eChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcc------ccc--cCCc---ccccCCH
Confidence            6899886     4568899999999999999999999997541111111111000      000  0010   1112355


Q ss_pred             HHHHHHHhcccCCCCC--CCCHHHHHH
Q 032213           76 TMVRVRLLCIQDEPNL--RPSMKNVIL  100 (145)
Q Consensus        76 ~~~~l~~~cl~~~p~~--Rpt~~~v~~  100 (145)
                      .+.+|+.+||..+|..  |+++.+++.
T Consensus       312 ~~~dLi~~lL~~~~~r~~r~~~~eil~  338 (437)
T 4aw2_A          312 NAKDLIRRLICSREHRLGQNGIEDFKK  338 (437)
T ss_dssp             HHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred             HHHHHHHHHhcccccccCCCCHHHHhC
Confidence            6889999999888777  999999986

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.09  E-value=3.4e-11  Score=88.83  Aligned_cols=98  Identities=14%  Similarity=0.077  Sum_probs=56.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHH-HHHHHH-HHHhHh------hhhhCcchhhcHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLS-TWVYNC-FIAKEL------NKLVGEDEEVDLR   72 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~------~~~~~~~~~~~~~   72 (145)
                      +|||++.+..++.++|+||+|++++++++|..||............. ...... ......      .............
T Consensus       190 ~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~  269 (676)
T 3qa8_A          190 LAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGI  269 (676)
T ss_dssp             CSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGG
T ss_pred             CChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchh
Confidence            58999988899999999999999999999999986431110000000 000000 000000      0000000012233


Q ss_pred             HHHHHHHHHHhcccCCCCCCCCHHHH
Q 032213           73 TLETMVRVRLLCIQDEPNLRPSMKNV   98 (145)
Q Consensus        73 ~~~~~~~l~~~cl~~~p~~Rpt~~~v   98 (145)
                      ....+.+++.+||..||.+||++.++
T Consensus       270 ls~~L~dLI~~mL~~DP~kRPTa~el  295 (676)
T 3qa8_A          270 LAGKLERWLQCMLMWHQRQRGTDPQN  295 (676)
T ss_dssp             GHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred             hhHHHHHHHHHHccCCHhhCcCHHHH
Confidence            56778999999999999999998774

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.07  E-value=5.5e-11  Score=81.98  Aligned_cols=87  Identities=9%  Similarity=0.001  Sum_probs=61.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++||||||++++||++|+.|+.........               +...+..   .+  ....+.++
T Consensus       252 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~---------------~~~~~~~---~~--~~~~~~~~  311 (365)
T 3e7e_A          252 QCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK---------------PEGLFRR---LP--HLDMWNEF  311 (365)
T ss_dssp             CCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE---------------ECSCCTT---CS--SHHHHHHH
T ss_pred             CChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee---------------echhccc---cC--cHHHHHHH
Confidence            6899999888999999999999999999999988543111000               0000000   11  14456788


Q ss_pred             HHhcccCCCCCC-CCHHHHHHHhhccCC
Q 032213           81 RLLCIQDEPNLR-PSMKNVILMLEGTME  107 (145)
Q Consensus        81 ~~~cl~~~p~~R-pt~~~v~~~L~~~~~  107 (145)
                      +..|+..+|.+| |++.++...|+....
T Consensus       312 ~~~~l~~~p~~r~~~~~~l~~~l~~~l~  339 (365)
T 3e7e_A          312 FHVMLNIPDCHHLPSLDLLRQKLKKVFQ  339 (365)
T ss_dssp             HHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred             HHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence            999999999988 577777777776543

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=98.91  E-value=5.3e-10  Score=82.96  Aligned_cols=81  Identities=23%  Similarity=0.321  Sum_probs=54.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++.+.. +.++||||||++++++++|..++.......                    + .. ..........+.++
T Consensus       244 ~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~--------------------~-~~-~~~~~~~~~~l~~l  300 (681)
T 2pzi_A          244 QAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG--------------------L-PE-DDPVLKTYDSYGRL  300 (681)
T ss_dssp             SCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS--------------------C-CT-TCHHHHHCHHHHHH
T ss_pred             cCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc--------------------c-cc-cccccccCHHHHHH
Confidence            6899887654 889999999999999999987765321000                    0 00 00011223568899


Q ss_pred             HHhcccCCCCCCCC-HHHHHHHhhc
Q 032213           81 RLLCIQDEPNLRPS-MKNVILMLEG  104 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt-~~~v~~~L~~  104 (145)
                      +.+||..+|.+||+ +.++...|..
T Consensus       301 i~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          301 LRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             HHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             HhhhccCChhhCCCHHHHHHHHHHH
Confidence            99999999999996 4445444544

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=97.97  E-value=7.9e-06  Score=55.54  Aligned_cols=82  Identities=9%  Similarity=0.026  Sum_probs=50.4

Q ss_pred             CCCcccccCCcccccchhhHHHH-HHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhh-hC--cchhhcHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVV-LLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKL-VG--EDEEVDLRTLET   76 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v-~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~   76 (145)
                      ||||++.+.. +.++||||++++ ..+++.|..|+...          .|..... ....... ..  .....+......
T Consensus       244 ~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~----------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~  311 (336)
T 2vuw_A          244 MDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV----------LWLHYLT-DKMLKQMTFKTKCNTPAMKQIKRK  311 (336)
T ss_dssp             TCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH----------HHHHHHH-HHHHHTCCCSSCCCSHHHHHHHHH
T ss_pred             cChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch----------hhhhHHH-HhhhhhhccCcccchhhhhhcCHH
Confidence            6899998655 889999998776 55677787776311          0100000 0001000 01  111334456788


Q ss_pred             HHHHHHhcccCCCCCCCCHHHHH
Q 032213           77 MVRVRLLCIQDEPNLRPSMKNVI   99 (145)
Q Consensus        77 ~~~l~~~cl~~~p~~Rpt~~~v~   99 (145)
                      +.+|+.+||..+     |+.+++
T Consensus       312 ~~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          312 IQEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             HHHHHHHGGGSS-----SHHHHH
T ss_pred             HHHHHHHHhccC-----CHHHHH
Confidence            999999999976     888887

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	145
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-13
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	5e-13
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-12
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	6e-12
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-11
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-11
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-11
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	7e-11
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-10
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-10
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	4e-10
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	8e-10
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-09
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	4e-09
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	5e-09
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	5e-09
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	9e-09
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	9e-09
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-08
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-08
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	4e-08
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	7e-08
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-07
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-07
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-07
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-07
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	3e-07
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-07
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	5e-07
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	4e-06
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-05
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-05
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	5e-05
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	5e-05
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	6e-05
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-04
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-04
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-04
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-04
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-04
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	5e-04
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	6e-04
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	7e-04
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	0.001
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	0.002
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	0.003
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	0.003
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	0.004

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.5 bits (151), Expect = 3e-13
 Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 14/109 (12%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
            +PE  +    T  SDV+SFG+V+ E++         +S  +V+            K +N
Sbjct: 180 TAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM------------KAIN 227

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIP 109
              G      +     + ++ + C Q E   RP   +++ +L+  +  P
Sbjct: 228 D--GFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 274

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.9 bits (150), Expect = 5e-13
 Identities = 23/106 (21%), Positives = 48/106 (45%), Gaps = 13/106 (12%)

Query: 1   MSPEW---QNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAK 57
           M+PE    Q+    + +SDVY+FG+VL E++  +  +  N++  D ++            
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIF---------MV 222

Query: 58  ELNKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
               L  +  +V     + M R+   C++ + + RP    ++  +E
Sbjct: 223 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.6 bits (146), Expect = 2e-12
 Identities = 24/107 (22%), Positives = 42/107 (39%), Gaps = 14/107 (13%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           M+ E   +   T KSDV+SFGV+L E++   +    +V+T D+               + 
Sbjct: 201 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT--------------VY 246

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTME 107
            L G          + +  V L C   +  +RPS   ++  +     
Sbjct: 247 LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 293

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.9 bits (142), Expect = 6e-12
 Identities = 24/103 (23%), Positives = 36/103 (34%), Gaps = 14/103 (13%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
            +PE       + KSDV+SFG++L EI          +   DVV          + K   
Sbjct: 167 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR--------VEK--- 215

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
              G   +        +  V   C   +  +RPS   +   LE
Sbjct: 216 ---GYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 255

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.5 bits (141), Expect = 1e-11
 Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 14/103 (13%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
            +PE  N G  T+KSDV+SFG++L EIV         ++  +V+                
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER----------- 225

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
              G          E + ++  LC ++ P  RP+   +  +LE
Sbjct: 226 ---GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.4 bits (138), Expect = 2e-11
 Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 14/107 (13%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
            SPE  +    + KSDV+SFGV++ E+         N S ++VV   +  +  +  +  +
Sbjct: 169 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAS 228

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTME 107
                           + ++   C ++ P  RP+   ++  L    E
Sbjct: 229 --------------THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 261

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.0 bits (137), Expect = 4e-11
 Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 14/103 (13%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
            +PE    G  T+KSDV+SFG++L E+          +   +V+                
Sbjct: 181 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER----------- 229

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
              G          E++  +   C + EP  RP+ + +   LE
Sbjct: 230 ---GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 269

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (135), Expect = 7e-11
 Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 18/126 (14%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           M+ E  N  + T  SDV+S+GV+L EIV         ++ A++                 
Sbjct: 193 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL---------------YE 237

Query: 61  KLV-GEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEI--PVVPFPILS 117
           KL  G   E  L   + +  +   C +++P  RPS   +++ L   +E     V   +  
Sbjct: 238 KLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNTTLYE 297

Query: 118 NFSSNS 123
            F+   
Sbjct: 298 KFTYAG 303

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.7 bits (131), Expect = 2e-10
 Identities = 24/103 (23%), Positives = 36/103 (34%), Gaps = 14/103 (13%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
            +PE  N    + KSDV+SFGV++ E           +  ++V  +        + K   
Sbjct: 177 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM--------LEK--- 225

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
              GE           M  +  LC   +   RP    V L L 
Sbjct: 226 ---GERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 265

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (130), Expect = 3e-10
 Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 18/110 (16%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           M+PE     + T +SDV+SFGV+L EI     +                 Y     +EL 
Sbjct: 204 MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP----------------YPGVPVEELF 247

Query: 61  KLVGEDEEVDL--RTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEI 108
           KL+ E   +D        +  +   C    P+ RP+ K ++  L+  + +
Sbjct: 248 KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 297

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.0 bits (129), Expect = 4e-10
 Identities = 21/110 (19%), Positives = 42/110 (38%), Gaps = 16/110 (14%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
            +PE       T  SDV+S+G+V+ E++        +++  DV               +N
Sbjct: 200 TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV---------------IN 244

Query: 61  KLV-GEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIP 109
            +         +     + ++ L C Q + N RP    ++  L+  +  P
Sbjct: 245 AIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNP 294

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (127), Expect = 8e-10
 Identities = 20/117 (17%), Positives = 37/117 (31%), Gaps = 16/117 (13%)

Query: 1   MSPEW------QNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCF 54
           M+PE               ++D+Y+ G+V  EI    S   ++            V +  
Sbjct: 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP--YYDLVPSDP 236

Query: 55  IAKELNKLVGE--------DEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
             +E+ K+V E        +       L  M ++   C       R +   +   L 
Sbjct: 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.6 bits (123), Expect = 3e-09
 Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 18/105 (17%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
            +PE       ++KSDV++FGV+L EI     +                 Y      ++ 
Sbjct: 183 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDLSQVY 226

Query: 61  KLVGEDEEVDL--RTLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
           +L+ +D  ++      E +  +   C Q  P+ RPS   +    E
Sbjct: 227 ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 271

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.2 bits (122), Expect = 4e-09
 Identities = 18/103 (17%), Positives = 37/103 (35%), Gaps = 14/103 (13%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
             PE       + KSD+++FGV++ EI           + ++            IA+   
Sbjct: 168 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH--------IAQ--- 216

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
              G          E +  +   C  ++ + RP+ K ++  + 
Sbjct: 217 ---GLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNIL 256

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.9 bits (121), Expect = 5e-09
 Identities = 19/103 (18%), Positives = 35/103 (33%), Gaps = 14/103 (13%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
            +PE  N    + +SDV+S+GV + E +         +   +V+         FI +   
Sbjct: 179 YAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA--------FIEQ--- 227

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
              G+  E        +  +   C   +   RP    V   + 
Sbjct: 228 ---GKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 267

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 5e-09
 Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 16/108 (14%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           MSPE    G+ T  SDV+SFGVVL EI          +S   V               L 
Sbjct: 202 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV---------------LR 246

Query: 61  KLV-GEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTME 107
            ++ G   +      + +  +  +C Q  P +RPS   +I  ++  ME
Sbjct: 247 FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 294

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 9e-09
 Identities = 22/127 (17%), Positives = 46/127 (36%), Gaps = 18/127 (14%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           M+ E     + T +SDV+S+GV + E++   S                  Y+   A E++
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKP----------------YDGIPASEIS 223

Query: 61  KLV--GEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTMEIPVVPFPILSN 118
            ++  GE           +  + + C   + + RP  + +I+        P     I  +
Sbjct: 224 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGD 283

Query: 119 FSSNSQT 125
              +  +
Sbjct: 284 ERMHLPS 290

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 50.2 bits (119), Expect = 9e-09
 Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 14/107 (13%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           M PE       T +SDV+++GVVL EI          ++  +V+         ++     
Sbjct: 209 MPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIY--------YVRD--- 257

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTME 107
              G            +  +  LC    P  RPS  ++  +L+   E
Sbjct: 258 ---GNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 301

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (117), Expect = 2e-08
 Identities = 21/107 (19%), Positives = 42/107 (39%), Gaps = 13/107 (12%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           M+PE   + + T +SDV+S+G+ L E+    S+    +                I +   
Sbjct: 214 MAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK-------MIKEGFR 266

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTME 107
            L  E    ++        +   C   +P  RP+ K ++ ++E  + 
Sbjct: 267 MLSPEHAPAEMY------DIMKTCWDADPLKRPTFKQIVQLIEKQIS 307

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.8 bits (116), Expect = 3e-08
 Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 14/99 (14%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           M+PE           DVY+FG+ +LE+      +       +   +   V +       +
Sbjct: 180 MAPE-MYEEKYDESVDVYAFGMCMLEMATSEYPYS---ECQNAAQIYRRVTSGVKPASFD 235

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVI 99
           K+   +          +  +   CI+   + R S+K+++
Sbjct: 236 KVAIPE----------VKEIIEGCIRQNKDERYSIKDLL 264

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.2 bits (114), Expect = 4e-08
 Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           M+PE  N    T  SDV+ FGV + EI+         V   DV+                
Sbjct: 176 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN----------- 224

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTME 107
              GE   +      T+  +   C   +P+ RP    +   L   +E
Sbjct: 225 ---GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 268

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (113), Expect = 7e-08
 Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 19/101 (18%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           MSPE  N      KSD++S G +L E+      F                   F  KEL 
Sbjct: 181 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT-----------------AFSQKELA 223

Query: 61  KLV--GEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVI 99
             +  G+   +  R  + +  +    +  +   RPS++ ++
Sbjct: 224 GKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEIL 264

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 46.8 bits (110), Expect = 1e-07
 Identities = 10/103 (9%), Positives = 24/103 (23%), Gaps = 8/103 (7%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
            S         + + D+ S G VL+        ++           +      +      
Sbjct: 180 ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLK--------AATKRQKYERISEK 231

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
           K+    E +              C     + +P    +  +  
Sbjct: 232 KMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 274

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.5 bits (110), Expect = 2e-07
 Identities = 18/101 (17%), Positives = 37/101 (36%), Gaps = 20/101 (19%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVN--VSTADVVLLSTWVYNCFIAKE 58
           + PE     +   K D++S GV+  E +  +  FE N    T   +    + +  F+ + 
Sbjct: 171 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 230

Query: 59  LNKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVI 99
              L+                     ++  P+ RP ++ V+
Sbjct: 231 ARDLI------------------SRLLKHNPSQRPMLREVL 253

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (109), Expect = 2e-07
 Identities = 20/103 (19%), Positives = 37/103 (35%), Gaps = 13/103 (12%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
            +PE   +   +  SD + FGV L E+        + ++ + ++          I KE  
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK--------IDKE-- 230

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
              GE         + +  V + C   +P  RP+   +   L 
Sbjct: 231 ---GERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 270

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (109), Expect = 3e-07
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFE 35
           MSPE       +V+SD++S G+ L+E+   R    
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP 204

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 3e-07
 Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 13/107 (12%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           M+PE     + T++SDV+SFGV+L EI    ++    V   +              + L 
Sbjct: 203 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC-----------RRLK 251

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTME 107
           +  G        T   M +  L C   EP+ RP+   ++  L   ++
Sbjct: 252 E--GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 296

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 4e-07
 Identities = 24/103 (23%), Positives = 38/103 (36%), Gaps = 13/103 (12%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           M+PE    G+ T+KSDV+S+G++L EI     N    +                  K + 
Sbjct: 233 MAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN-----------FYKLIQ 281

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLE 103
              G   +      E +  +   C   +   RPS  N+   L 
Sbjct: 282 N--GFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (106), Expect = 5e-07
 Identities = 18/99 (18%), Positives = 38/99 (38%), Gaps = 13/99 (13%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           M+PE         K D++S G++ +E++     +  N +    + L        IA    
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL-NENPLRALYL--------IATNGT 233

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVI 99
             +   E++     + + R    C+  +   R S K ++
Sbjct: 234 PELQNPEKLSAIFRDFLNR----CLDMDVEKRGSAKELL 268

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 4e-06
 Identities = 14/99 (14%), Positives = 36/99 (36%), Gaps = 14/99 (14%)

Query: 1   MSPEW-QNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKEL 59
           ++PE  +         DV+S G+VL  ++     ++    +      S W          
Sbjct: 172 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD--QPSDSCQEYSDWKEKKTYLNPW 229

Query: 60  NKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNV 98
            K+  +   + L     + +     + + P+ R ++ ++
Sbjct: 230 KKI--DSAPLAL-----LHK----ILVENPSARITIPDI 257

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 41.1 bits (96), Expect = 1e-05
 Identities = 23/148 (15%), Positives = 53/148 (35%), Gaps = 24/148 (16%)

Query: 1   MSPEW---QNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAK 57
           M+PE     + G    K DV+S G+  +E+   +       + + +  ++        + 
Sbjct: 178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSG 237

Query: 58  ELNKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVI----LMLEGTMEIPVVPF 113
             +              E        C+Q  P  RP+ + ++    ++ E     P V  
Sbjct: 238 HWS--------------EYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE---RPPTVIM 280

Query: 114 PILSNFSSNSQTLDGTKGRDLRFLLEEQ 141
            ++       + LD  + R ++ +L ++
Sbjct: 281 DLIQRTKDAVRELDNLQYRKMKKILFQE 308

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 2e-05
 Identities = 19/102 (18%), Positives = 34/102 (33%), Gaps = 20/102 (19%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEV--NVSTADVVLLSTWVYNCFIAKE 58
           ++PE           D +SFGV+L E++  +S F           + +    Y  ++ KE
Sbjct: 170 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKE 229

Query: 59  LNKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL 100
              L+                  +     EP  R  ++  I 
Sbjct: 230 AKDLL------------------VKLFVREPEKRLGVRGDIR 253

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 39.3 bits (91), Expect = 5e-05
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFE 35
           +SPE      +  +SDVYS G VL E++     F 
Sbjct: 181 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT 215

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 39.4 bits (91), Expect = 5e-05
 Identities = 11/107 (10%), Positives = 27/107 (25%), Gaps = 8/107 (7%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           MS         + + D+ + G V +  +     ++         L +      +      
Sbjct: 180 MSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQ--------GLKAATNKQKYERIGEK 231

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTME 107
           K      E+     E   +          +  P    +  +    +E
Sbjct: 232 KQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE 278

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (91), Expect = 6e-05
 Identities = 17/100 (17%), Positives = 36/100 (36%), Gaps = 23/100 (23%)

Query: 1   MSPEW-QNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKEL 59
             PEW +        + V+S G++L ++VC    FE      + ++     +   ++ E 
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE----HDEEIIRGQVFFRQRVSSEC 231

Query: 60  NKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVI 99
             L+                    C+   P+ RP+ + + 
Sbjct: 232 QHLI------------------RWCLALRPSDRPTFEEIQ 253

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (88), Expect = 1e-04
 Identities = 21/148 (14%), Positives = 47/148 (31%), Gaps = 13/148 (8%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           ++PE           D++S GV++  ++C    F  N      + +S  +       +  
Sbjct: 180 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN----HGLAISPGMKTRIRMGQYE 235

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNV-----ILMLEGTMEIPVVPFPI 115
               E  EV       +       ++ EP  R ++        I+      + P+    +
Sbjct: 236 FPNPEWSEVSEEVKMLIRN----LLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRV 291

Query: 116 LSNFSSNSQTLDGTKGRDLRFLLEEQKQ 143
           L       + +       L  +  + +Q
Sbjct: 292 LKEDKERWEDVKEEMTSALATMRVDYEQ 319

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 38.1 bits (88), Expect = 2e-04
 Identities = 13/99 (13%), Positives = 31/99 (31%), Gaps = 12/99 (12%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
            +PE      +   +D++S GV+   ++   S F    +  +            +    +
Sbjct: 192 AAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE-NDDET-----------LRNVKS 239

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVI 99
                D+       E         +  +PN R ++   +
Sbjct: 240 CDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQAL 278

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 2e-04
 Identities = 15/99 (15%), Positives = 39/99 (39%), Gaps = 12/99 (12%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           ++PE  N   + +++D++S GV+   ++   S F  +     +  +S   Y      E  
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY------EFE 236

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVI 99
                +     +    + R     +  +P  R ++++ +
Sbjct: 237 DEYFSNTSALAKDF--IRR----LLVKDPKKRMTIQDSL 269

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 3e-04
 Identities = 17/104 (16%), Positives = 37/104 (35%), Gaps = 18/104 (17%)

Query: 1   MSPEW-----QNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFI 55
           M+PE              K+DV+S G+ L+E+          ++   V+L         I
Sbjct: 177 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH-ELNPMRVLLK--------I 227

Query: 56  AKELNKLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVI 99
           AK     + +         + + +    C++   + R +   ++
Sbjct: 228 AKSEPPTLAQPSRWSSNFKDFLKK----CLEKNVDARWTTSQLL 267

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (85), Expect = 3e-04
 Identities = 15/110 (13%), Positives = 32/110 (29%), Gaps = 11/110 (10%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVN---------VSTADVVLLSTWVY 51
            +PE           D++S G +  E+   +  F  +         +    +     W  
Sbjct: 182 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 241

Query: 52  NCFIAKELNKLVGEDEEVDLRTLETMVRVRLL--CIQDEPNLRPSMKNVI 99
           +  + ++              T    +   LL  C+   P  R S  + +
Sbjct: 242 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 291

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.6 bits (84), Expect = 5e-04
 Identities = 11/99 (11%), Positives = 32/99 (32%), Gaps = 12/99 (12%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
           ++PE       +   D +S GV+   ++C    F               ++   +  E  
Sbjct: 176 VAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK--------LFEQILKAEYE 227

Query: 61  KLVGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVI 99
                 +++     + +       ++ +P  R + +  +
Sbjct: 228 FDSPYWDDISDSAKDFIRH----LMEKDPEKRFTCEQAL 262

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 6e-04
 Identities = 6/35 (17%), Positives = 18/35 (51%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFE 35
            +PE     +++  +D++S G ++  ++   + F 
Sbjct: 170 YAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFL 204

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (83), Expect = 7e-04
 Identities = 8/35 (22%), Positives = 16/35 (45%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFE 35
           +SPE          SD+++ G ++ ++V     F 
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 211

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (81), Expect = 0.001
 Identities = 23/114 (20%), Positives = 38/114 (33%), Gaps = 16/114 (14%)

Query: 1   MSPE-WQNSGLITVKSDVYSFGVVLLEIVCCRSNFE------------VNVSTADVVLLS 47
            +PE        +   D++S G +  E+V  R+ F               + T D V+  
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228

Query: 48  TWVYNCFIAKELNKLVGEDEEVDLRTLETMVRVRLL--CIQDEPNLRPSMKNVI 99
                        K   +D    +  L+   R  LL   +  +PN R S K  +
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR-SLLSQMLHYDPNKRISAKAAL 281

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.1 bits (80), Expect = 0.002
 Identities = 8/35 (22%), Positives = 19/35 (54%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFE 35
           ++PE  ++       D +SFG+++ E++   + F 
Sbjct: 168 IAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFY 202

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.5 bits (78), Expect = 0.003
 Identities = 9/112 (8%), Positives = 26/112 (23%), Gaps = 14/112 (12%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN 60
                  + L +   D++S G +  E+              D +     +      ++  
Sbjct: 169 PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWP 228

Query: 61  KLVGEDEEVDLRTLETMVRVRLL--------------CIQDEPNLRPSMKNV 98
            +    +            +  +               ++  P  R S +  
Sbjct: 229 SMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA 280

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (78), Expect = 0.003
 Identities = 22/141 (15%), Positives = 44/141 (31%), Gaps = 20/141 (14%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNF----EVNVSTADVVLLSTWVYNCFIA 56
                  +   T   DV+S G VL E++  +  F     V+     + +L T        
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249

Query: 57  KELNKLVGEDEEVDLRTLETMVRVRL---------LCIQDEPNLRPSMKNVIL------M 101
              N    +  ++       + R R            ++  P  R +            +
Sbjct: 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309

Query: 102 LEGTMEIP-VVPFPILSNFSS 121
            +  +++P     P L NF++
Sbjct: 310 RDPNVKLPNGRDTPALFNFTT 330

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 34.3 bits (78), Expect = 0.004
 Identities = 7/35 (20%), Positives = 17/35 (48%)

Query: 1   MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFE 35
            +PE  +   +   +D+++ GV+   ++   S F 
Sbjct: 195 AAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFA 229

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	145
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.77
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.77
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.76
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.75
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.75
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.74
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.74
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.74
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.74
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.74
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.73
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.73
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.73
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.72
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.72
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.72
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.71
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.7
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.7
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.7
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.7
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.68
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.68
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.67
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.64
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.63
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.63
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.63
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.62
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.62
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.62
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.62
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.62
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.61
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.6
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.59
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.59
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.58
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.58
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.56
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.56
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.55
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.55
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.54
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.53
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.53
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.51
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.5
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.49
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.49
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.48
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.44
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.43
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.43
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.42
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.42
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.4
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.38
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.36
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.35
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.35
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.32

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=4.6e-20  Score=122.01  Aligned_cols=95  Identities=22%  Similarity=0.370  Sum_probs=69.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.++.++.++|||||||++|||+++..|+........   +...         +..  ..+++.+...+..+.+|
T Consensus       180 ~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~---~~~~---------i~~--~~~~~~~~~~~~~l~~l  245 (283)
T d1mqba_         180 TAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE---VMKA---------IND--GFRLPTPMDCPSAIYQL  245 (283)
T ss_dssp             SCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HHHH---------HHT--TCCCCCCTTCBHHHHHH
T ss_pred             cCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHH---HHHH---------Hhc--cCCCCCchhhHHHHHHH
Confidence            699999999999999999999999999997766553312111   1111         000  01122333455678999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhccCCCC
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEGTMEIP  109 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~~~~~~  109 (145)
                      +.+||..+|.+||++.+|++.|+.+.+.+
T Consensus       246 i~~cl~~~p~~RPt~~eil~~L~~l~~~p  274 (283)
T d1mqba_         246 MMQCWQQERARRPKFADIVSILDKLIRAP  274 (283)
T ss_dssp             HHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred             HHHHCcCCHhHCcCHHHHHHHHHHHhhCc
Confidence            99999999999999999999999877654

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=4.9e-20  Score=120.73  Aligned_cols=92  Identities=22%  Similarity=0.240  Sum_probs=65.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++|||||||++||++++..|+........   +......           ..+...|..++..+.+|
T Consensus       169 ~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~---~~~~i~~-----------~~~~~~p~~~~~~l~~l  234 (263)
T d1sm2a_         169 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---VVEDIST-----------GFRLYKPRLASTHVYQI  234 (263)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHH---HHHHHHH-----------TCCCCCCTTSCHHHHHH
T ss_pred             CChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHH---HHHHHHh-----------cCCCCCccccCHHHHHH
Confidence            689999999999999999999999999996555443212111   1111100           01111223345678999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      +.+||+.||.+||++.+|++.|+++.
T Consensus       235 i~~cl~~~p~~Rps~~~il~~L~~i~  260 (263)
T d1sm2a_         235 MNHCWKERPEDRPAFSRLLRQLAEIA  260 (263)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHccCCHhHCcCHHHHHHHHHHHH
Confidence            99999999999999999999998764

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.76  E-value=5.7e-20  Score=122.41  Aligned_cols=93  Identities=18%  Similarity=0.258  Sum_probs=69.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++.++.++.++|||||||++|||++ |..||... ...   .+....         .  -+..++.+...+..+.+
T Consensus       200 ~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~-~~~---~~~~~i---------~--~~~~~~~~~~~~~~l~~  264 (299)
T d1jpaa_         200 TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM-TNQ---DVINAI---------E--QDYRLPPPMDCPSALHQ  264 (299)
T ss_dssp             SCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CHH---HHHHHH---------H--TTCCCCCCTTCCHHHHH
T ss_pred             cCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCC-CHH---HHHHHH---------H--cCCCCCCCccchHHHHH
Confidence            68999988899999999999999999997 78888643 111   111110         0  01122334445667899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      |+.+||+.+|.+||++.+|++.|+++.+.
T Consensus       265 li~~cl~~~P~~RPs~~ei~~~L~~~l~~  293 (299)
T d1jpaa_         265 LMLDCWQKDRNHRPKFGQIVNTLDKMIRN  293 (299)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence            99999999999999999999999987653

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=2e-19  Score=118.57  Aligned_cols=96  Identities=21%  Similarity=0.371  Sum_probs=67.8

Q ss_pred             CCCccccc---CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcch-hhcHHHHHH
Q 032213            1 MSPEWQNS---GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDE-EVDLRTLET   76 (145)
Q Consensus         1 ~aPe~~~~---~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   76 (145)
                      ||||++.+   ..++.++|||||||++|||++|+.||..............           .....+.. ..+...+..
T Consensus       173 ~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~-----------~~~~~p~~~~~~~~~~~~  241 (276)
T d1uwha_         173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG-----------RGYLSPDLSKVRSNCPKA  241 (276)
T ss_dssp             CCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHH-----------HTSCCCCGGGSCTTCCHH
T ss_pred             CCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHh-----------cCCCCCcchhccccchHH
Confidence            79999863   3578999999999999999999999875421111111100           00111111 223344567


Q ss_pred             HHHHHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           77 MVRVRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        77 ~~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      +.+|+.+||..+|.+|||+.+|+..|+.+.+
T Consensus       242 l~~li~~cl~~dp~~RPt~~~il~~Le~l~~  272 (276)
T d1uwha_         242 MKRLMAECLKKKRDERPLFPQILASIELLAR  272 (276)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            8999999999999999999999999987754

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.75  E-value=2e-19  Score=119.90  Aligned_cols=92  Identities=25%  Similarity=0.291  Sum_probs=66.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCC-CCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRS-NFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++.+..++.++|||||||++|||++|.. |+... ...+   +....    ..       ...++.+...+..+.+
T Consensus       209 ~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~-~~~e---~~~~v----~~-------~~~~~~p~~~~~~~~~  273 (301)
T d1lufa_         209 MPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM-AHEE---VIYYV----RD-------GNILACPENCPLELYN  273 (301)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-CHHH---HHHHH----HT-------TCCCCCCTTCCHHHHH
T ss_pred             CCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCC-CHHH---HHHHH----Hc-------CCCCCCCccchHHHHH
Confidence            68999998899999999999999999999865 55432 1111   11110    00       0111233344567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      |+.+||+.+|.+||||.+|++.|+++.+
T Consensus       274 li~~cl~~~P~~RPt~~ev~~~L~~i~~  301 (301)
T d1lufa_         274 LMRLCWSKLPADRPSFCSIHRILQRMCE  301 (301)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             HHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            9999999999999999999999998753

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2.2e-19  Score=118.83  Aligned_cols=91  Identities=18%  Similarity=0.261  Sum_probs=67.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++.++.++.++|||||||++||+++ |..||.... ...   +....         ..  ..+++.|...+..+.+
T Consensus       179 ~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~-~~~---~~~~i---------~~--~~~~~~p~~~~~~l~~  243 (285)
T d1u59a_         179 YAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK-GPE---VMAFI---------EQ--GKRMECPPECPPELYA  243 (285)
T ss_dssp             CCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-THH---HHHHH---------HT--TCCCCCCTTCCHHHHH
T ss_pred             cChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCC-HHH---HHHHH---------Hc--CCCCCCCCcCCHHHHH
Confidence            68999998899999999999999999997 888987541 111   11110         00  1112334445667899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      |+.+||..+|.+||++.+|++.|+...
T Consensus       244 li~~cl~~~p~~RPs~~~i~~~L~~~~  270 (285)
T d1u59a_         244 LMSDCWIYKWEDRPDFLTVEQRMRACY  270 (285)
T ss_dssp             HHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            999999999999999999999887643

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=3.4e-19  Score=117.47  Aligned_cols=89  Identities=27%  Similarity=0.344  Sum_probs=66.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++.+..++.++|||||||++||+++ |..||... ........+            ..  ..+++.|...+..+.+
T Consensus       177 ~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~-~~~~~~~~i------------~~--~~~~~~p~~~~~~~~~  241 (277)
T d1xbba_         177 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM-KGSEVTAML------------EK--GERMGCPAGCPREMYD  241 (277)
T ss_dssp             CCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTC-CHHHHHHHH------------HT--TCCCCCCTTCCHHHHH
T ss_pred             cCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCC-CHHHHHHHH------------Hc--CCCCCCCcccCHHHHH
Confidence            69999998899999999999999999997 78888754 111111110            00  1122334445667899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEG  104 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~  104 (145)
                      |+.+||..+|.+||++.+|+..|+.
T Consensus       242 li~~cl~~dp~~RPs~~~i~~~L~~  266 (277)
T d1xbba_         242 LMNLCWTYDVENRPGFAAVELRLRN  266 (277)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             HHHHHcCCCHhHCcCHHHHHHHhhC
Confidence            9999999999999999999888875

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=3.4e-19  Score=116.57  Aligned_cols=91  Identities=26%  Similarity=0.306  Sum_probs=66.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.++.++.++||||||+++|||++ |..|+... .....   ....         .  -..+++.+...+..+.+
T Consensus       167 ~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~-~~~~~---~~~i---------~--~~~~~~~~~~~~~~~~~  231 (262)
T d1byga_         167 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKDV---VPRV---------E--KGYKMDAPDGCPPAVYE  231 (262)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS-CGGGH---HHHH---------T--TTCCCCCCTTCCHHHHH
T ss_pred             CChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCC-CHHHH---HHHH---------H--cCCCCCCCccCCHHHHH
Confidence            68999998899999999999999999998 56665432 22111   1111         0  01122334444567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      |+.+||..||.+|||+.++++.|+.+.
T Consensus       232 li~~cl~~dP~~Rps~~~l~~~L~~i~  258 (262)
T d1byga_         232 VMKNCWHLDAAMRPSFLQLREQLEHIK  258 (262)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence            999999999999999999999998763

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=9.3e-19  Score=115.74  Aligned_cols=94  Identities=24%  Similarity=0.317  Sum_probs=69.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++..+.++.++||||||+++||+++|..|+............+   .     .      ....+.+..++..+.+|
T Consensus       181 ~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i---~-----~------~~~~~~~~~~~~~l~~l  246 (285)
T d1fmka3         181 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV---E-----R------GYRMPCPPECPESLHDL  246 (285)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH---H-----T------TCCCCCCTTSCHHHHHH
T ss_pred             cChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHH---H-----h------cCCCCCCcccCHHHHHH
Confidence            68999999999999999999999999999877665432221111111   0     0      11122344456678999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhccCCC
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEGTMEI  108 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~~~~~  108 (145)
                      +.+||+.||++||++.+|+..|+.....
T Consensus       247 i~~cl~~dP~~Rps~~~i~~~L~~~~~~  274 (285)
T d1fmka3         247 MCQCWRKEPEERPTFEYLQAFLEDYFTS  274 (285)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             HHHHcccCHhHCcCHHHHHHHHhhhhcC
Confidence            9999999999999999999999986643

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2.4e-19  Score=117.96  Aligned_cols=91  Identities=29%  Similarity=0.388  Sum_probs=65.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.++.++.++|||||||++|||++|..|+........   +...         +..  ..++..+...+..+.+|
T Consensus       177 ~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~---~~~~---------i~~--~~~~~~p~~~~~~l~~l  242 (272)
T d1qpca_         177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---VIQN---------LER--GYRMVRPDNCPEELYQL  242 (272)
T ss_dssp             SCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HHHH---------HHT--TCCCCCCTTCCHHHHHH
T ss_pred             cChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHH---HHHH---------HHh--cCCCCCcccChHHHHHH
Confidence            689999988999999999999999999997766543312111   1111         000  11112233445678999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      +.+||+.+|.+|||+.+|++.|+.+
T Consensus       243 i~~cl~~~P~~Rpt~~ei~~~L~~~  267 (272)
T d1qpca_         243 MRLCWKERPEDRPTFDYLRSVLEDF  267 (272)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHcCCCHhHCcCHHHHHHHhhhh
Confidence            9999999999999999999998864

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=4e-19  Score=119.55  Aligned_cols=89  Identities=27%  Similarity=0.367  Sum_probs=66.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++.++.++.++|||||||++|||++ |..||..............        .      ..+++.|...+..+.+
T Consensus       233 ~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~--------~------~~~~~~p~~~~~~l~~  298 (325)
T d1rjba_         233 MAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQ--------N------GFKMDQPFYATEEIYI  298 (325)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH--------T------TCCCCCCTTCCHHHHH
T ss_pred             CChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHh--------c------CCCCCCCCcCCHHHHH
Confidence            79999999999999999999999999997 7888865422211111110        0      0112233445667899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhh
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLE  103 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~  103 (145)
                      |+.+||+.+|.+|||+.+|++.|.
T Consensus       299 li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         299 IMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHcCCChhHCcCHHHHHHHHh
Confidence            999999999999999999999885

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.73  E-value=6.8e-19  Score=116.56  Aligned_cols=93  Identities=26%  Similarity=0.296  Sum_probs=68.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++|||||||++|||++|..|+............+            ..  +..+..+...+..+.+|
T Consensus       183 ~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i------------~~--~~~~~~~~~~~~~l~~l  248 (287)
T d1opja_         183 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------EK--DYRMERPEGCPEKVYEL  248 (287)
T ss_dssp             CCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH------------HT--TCCCCCCTTCCHHHHHH
T ss_pred             cChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHH------------hc--CCCCCCCccchHHHHHH
Confidence            68999998999999999999999999999877765432211111111            00  11122333445678999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      +.+||+.||.+|||+.+|++.|+.+.+
T Consensus       249 i~~cl~~dP~~Rps~~ei~~~L~~~~~  275 (287)
T d1opja_         249 MRACWQWNPSDRPSFAEIHQAFETMFQ  275 (287)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHTTS
T ss_pred             HHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            999999999999999999999987754

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=7.3e-19  Score=114.76  Aligned_cols=89  Identities=19%  Similarity=0.309  Sum_probs=65.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++....++.++||||||+++|||++ |+.||... ...+   +...         +..  ..++..|...+..+.+
T Consensus       168 ~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~-~~~~---~~~~---------i~~--~~~~~~p~~~~~~l~~  232 (258)
T d1k2pa_         168 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF-TNSE---TAEH---------IAQ--GLRLYRPHLASEKVYT  232 (258)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS-CHHH---HHHH---------HHT--TCCCCCCTTCCHHHHH
T ss_pred             CCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCC-CHHH---HHHH---------HHh--CCCCCCcccccHHHHH
Confidence            68999998899999999999999999998 78787644 1111   1110         000  1111223344567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEG  104 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~  104 (145)
                      |+.+||..+|.+|||+.+++..|..
T Consensus       233 li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         233 IMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             HHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             HHHHHccCCHhHCcCHHHHHHHhhC
Confidence            9999999999999999999998864

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=6.7e-19  Score=117.71  Aligned_cols=94  Identities=29%  Similarity=0.351  Sum_probs=68.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCC-CCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRS-NFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||.+.++.++.++||||||+++|||++|.. |+... ...   .+...         +.  -..++..+...+..+.+
T Consensus       193 ~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~-~~~---~~~~~---------i~--~~~~~~~~~~~~~~~~~  257 (309)
T d1fvra_         193 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-TCA---ELYEK---------LP--QGYRLEKPLNCDDEVYD  257 (309)
T ss_dssp             CCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC-CHH---HHHHH---------GG--GTCCCCCCTTBCHHHHH
T ss_pred             cchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCC-CHH---HHHHH---------HH--hcCCCCCCccCCHHHHH
Confidence            58999998899999999999999999999765 45432 111   11110         00  01122233344667999


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccCCCC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTMEIP  109 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~~~~  109 (145)
                      |+.+||..+|++||++.+|+..|+.+.+..
T Consensus       258 li~~cl~~dP~~RPs~~eil~~L~~i~~~~  287 (309)
T d1fvra_         258 LMRQCWREKPYERPSFAQILVSLNRMLEER  287 (309)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             HHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence            999999999999999999999999876544

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=5.4e-19  Score=116.27  Aligned_cols=91  Identities=19%  Similarity=0.222  Sum_probs=66.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++||||||+++|||++ |..||... .   ..........    .      ...++.+...+..+.+
T Consensus       181 ~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~-~---~~~~~~~i~~----~------~~~~~~~~~~~~~l~~  246 (273)
T d1u46a_         181 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-N---GSQILHKIDK----E------GERLPRPEDCPQDIYN  246 (273)
T ss_dssp             CCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC-C---HHHHHHHHHT----S------CCCCCCCTTCCHHHHH
T ss_pred             CCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCc-C---HHHHHHHHHh----C------CCCCCCcccccHHHHH
Confidence            68999998899999999999999999997 78888643 1   1111111100    0      1111223334567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      |+..||..||++|||+.+|++.|.+.
T Consensus       247 li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         247 VMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            99999999999999999999988764

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=7.2e-19  Score=117.63  Aligned_cols=93  Identities=26%  Similarity=0.377  Sum_probs=66.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||++....++.++||||||++++|+++|..|+........   +....           .-+.++..|...+..+.+|
T Consensus       201 ~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~---~~~~i-----------~~g~~~~~p~~~~~~l~~l  266 (311)
T d1r0pa_         201 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYL-----------LQGRRLLQPEYCPDPLYEV  266 (311)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC---------CHHHH-----------HTTCCCCCCTTCCHHHHHH
T ss_pred             cChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHH---HHHHH-----------HcCCCCCCcccCcHHHHHH
Confidence            589998888999999999999999999998887764311111   11110           0011122233445678999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      +.+||+.+|.+||++.+|++.|+++..
T Consensus       267 i~~cl~~dP~~RPs~~ei~~~L~~i~~  293 (311)
T d1r0pa_         267 MLKCWHPKAEMRPSFSELVSRISAIFS  293 (311)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            999999999999999999999998764

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.2e-18  Score=114.60  Aligned_cols=91  Identities=25%  Similarity=0.320  Sum_probs=67.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      +|||++.+..++.++|||||||++|||++ |..|+... ....   +.....           -....+.+...+..+.+
T Consensus       176 ~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~-~~~~---~~~~i~-----------~~~~~~~~~~~~~~~~~  240 (273)
T d1mp8a_         176 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV-KNND---VIGRIE-----------NGERLPMPPNCPPTLYS  240 (273)
T ss_dssp             CCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTC-CGGG---HHHHHH-----------TTCCCCCCTTCCHHHHH
T ss_pred             chhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCC-CHHH---HHHHHH-----------cCCCCCCCCCCCHHHHH
Confidence            68999998899999999999999999987 77777643 1111   111100           01112234445667899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      |+.+||..||.+|||+.+|+..|+.+.
T Consensus       241 li~~cl~~dp~~Rps~~ei~~~L~~i~  267 (273)
T d1mp8a_         241 LMTKCWAYDPSRRPRFTELKAQLSTIL  267 (273)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            999999999999999999999988764

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.9e-18  Score=115.86  Aligned_cols=91  Identities=18%  Similarity=0.256  Sum_probs=67.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++.++.++.++|||||||++|||++ |..|+... ........+..              ..+++.+...+..+.+
T Consensus       180 ~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~-~~~~~~~~i~~--------------~~~~~~p~~~~~~~~~  244 (317)
T d1xkka_         180 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK--------------GERLPQPPICTIDVYM  244 (317)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS-CGGGHHHHHHH--------------TCCCCCCTTBCHHHHH
T ss_pred             cChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCC-CHHHHHHHHHc--------------CCCCCCCcccCHHHHH
Confidence            68999998999999999999999999998 67776543 22111111100              1112233445567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      |+.+||..+|.+|||+.+++..|+.+.
T Consensus       245 li~~cl~~dP~~RPs~~eil~~l~~~~  271 (317)
T d1xkka_         245 IMVKCWMIDADSRPKFRELIIEFSKMA  271 (317)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHhCCCChhhCcCHHHHHHHHHHHH
Confidence            999999999999999999999887764

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=2.4e-18  Score=112.61  Aligned_cols=84  Identities=19%  Similarity=0.279  Sum_probs=63.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++|+||+||+++||++|+.||... ...   .+..            .+.......|...+..+.+|
T Consensus       171 ~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~-~~~---~~~~------------~i~~~~~~~p~~~s~~~~~l  234 (263)
T d2j4za1         171 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-TYQ---ETYK------------RISRVEFTFPDFVTEGARDL  234 (263)
T ss_dssp             CCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCS-SHH---HHHH------------HHHTTCCCCCTTSCHHHHHH
T ss_pred             cCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCC-CHH---HHHH------------HHHcCCCCCCccCCHHHHHH
Confidence            7999999888999999999999999999999998643 111   1111            11111122233345678999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..||.+|||+.++++
T Consensus       235 i~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         235 ISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             HHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHccCCHhHCcCHHHHHc
Confidence            99999999999999999975

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.8e-18  Score=115.14  Aligned_cols=91  Identities=26%  Similarity=0.353  Sum_probs=66.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHh-CCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVC-CRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++.++.++.++||||||+++|||++ |..|+... ...   .+...         +..  ...+..+...+..+.+
T Consensus       204 ~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~-~~~---~~~~~---------i~~--~~~~~~p~~~~~~l~~  268 (299)
T d1fgka_         204 MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVE---ELFKL---------LKE--GHRMDKPSNCTNELYM  268 (299)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-CHH---HHHHH---------HHT--TCCCCCCSSCCHHHHH
T ss_pred             hhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCC-CHH---HHHHH---------HHc--CCCCCCCccchHHHHH
Confidence            68999998999999999999999999998 56666532 111   11111         000  1111223334567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      |+.+||+.+|.+|||+.+|++.|+++.
T Consensus       269 li~~cl~~dP~~Rps~~eil~~L~~i~  295 (299)
T d1fgka_         269 MMRDCWHAVPSQRPTFKQLVEDLDRIV  295 (299)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence            999999999999999999999998764

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=2.4e-18  Score=114.43  Aligned_cols=92  Identities=26%  Similarity=0.362  Sum_probs=66.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCC-CCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRS-NFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++.+..++.++|||||||++|||+++.. |+.............            ..  ...+..+...+..+.+
T Consensus       203 ~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~------------~~--~~~~~~~~~~~~~l~~  268 (299)
T d1ywna1         203 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL------------KE--GTRMRAPDYTTPEMYQ  268 (299)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHH------------HH--TCCCCCCTTCCHHHHH
T ss_pred             cchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHH------------hc--CCCCCCCccCCHHHHH
Confidence            69999999999999999999999999998754 554331111111110            00  0111223334567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      ++.+||+.||.+|||+.++++.|+.+.
T Consensus       269 li~~cl~~dP~~Rpt~~eil~~L~~il  295 (299)
T d1ywna1         269 TMLDCWHGEPSQRPTFSELVEHLGNLL  295 (299)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            999999999999999999999998764

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=7.7e-18  Score=112.45  Aligned_cols=91  Identities=31%  Similarity=0.454  Sum_probs=66.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCC-CCCCCCCchhhHhHHHHHHHHHHHhHhhhhhC-cchhhcHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRS-NFEVNVSTADVVLLSTWVYNCFIAKELNKLVG-EDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   78 (145)
                      ||||.+.++.++.++|+||||++++||++|.. |+... ........               +.+ ..+..+...+..+.
T Consensus       202 ~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~-~~~~~~~~---------------i~~~~~~~~p~~~~~~l~  265 (308)
T d1p4oa_         202 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL-SNEQVLRF---------------VMEGGLLDKPDNCPDMLF  265 (308)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-CHHHHHHH---------------HHTTCCCCCCTTCCHHHH
T ss_pred             CCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCC-CHHHHHHH---------------HHhCCCCCCcccchHHHH
Confidence            68899888899999999999999999999864 44322 11111110               111 11223334456799


Q ss_pred             HHHHhcccCCCCCCCCHHHHHHHhhccCC
Q 032213           79 RVRLLCIQDEPNLRPSMKNVILMLEGTME  107 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt~~~v~~~L~~~~~  107 (145)
                      +++.+||+.+|.+||++.+|++.|++..+
T Consensus       266 ~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         266 ELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            99999999999999999999999987654

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=6.9e-18  Score=110.72  Aligned_cols=85  Identities=22%  Similarity=0.296  Sum_probs=62.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++|||||||+++||++|..||... ...   .+....    .....       ...+...+..+.+|
T Consensus       181 ~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~-~~~---~~~~~i----~~~~~-------~~~~~~~s~~l~~l  245 (269)
T d2java1         181 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF-SQK---ELAGKI----REGKF-------RRIPYRYSDELNEI  245 (269)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS-SHH---HHHHHH----HHTCC-------CCCCTTSCHHHHHH
T ss_pred             CCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCC-CHH---HHHHHH----HcCCC-------CCCCcccCHHHHHH
Confidence            7999999889999999999999999999999998743 111   111110    00000       11222345578999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||+.||.+||++.++++
T Consensus       246 i~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         246 ITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             HHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHcCCChhHCcCHHHHHh
Confidence            99999999999999999864

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.2e-17  Score=111.64  Aligned_cols=92  Identities=21%  Similarity=0.296  Sum_probs=64.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhh-HhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADV-VLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++.+..++.++||||||+++|||+++..|+......... ..+..        ..      .++..+...+..+.+
T Consensus       214 ~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~--------~~------~~~~~~~~~~~~l~~  279 (311)
T d1t46a_         214 MAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK--------EG------FRMLSPEHAPAEMYD  279 (311)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHH--------HT------CCCCCCTTSCHHHHH
T ss_pred             cCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHh--------cC------CCCCCcccccHHHHH
Confidence            6899998888999999999999999999855554332122111 11111        00      111222334567899


Q ss_pred             HHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           80 VRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      |+.+||+.||.+||++.+|++.|++..
T Consensus       280 Li~~cl~~dP~~RPs~~~il~~L~~~i  306 (311)
T d1t46a_         280 IMKTCWDADPLKRPTFKQIVQLIEKQI  306 (311)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHcCCChhHCcCHHHHHHHHHHhh
Confidence            999999999999999999999998643

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=3.9e-17  Score=108.27  Aligned_cols=87  Identities=14%  Similarity=0.161  Sum_probs=62.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++||||+||++++|++|..||...... .   ......    ..     .......+...+..+.+|
T Consensus       183 ~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~-~---~~~~~~----~~-----~~~~~~~~~~~s~~~~~l  249 (293)
T d1yhwa1         183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-R---ALYLIA----TN-----GTPELQNPEKLSAIFRDF  249 (293)
T ss_dssp             CCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-H---HHHHHH----HH-----CSCCCSSGGGSCHHHHHH
T ss_pred             cChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHH-H---HHHHHH----hC-----CCCCCCCcccCCHHHHHH
Confidence            6999999988999999999999999999999998643111 1   100000    00     011112233345678999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..||.+|||+.+++.
T Consensus       250 i~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         250 LNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             HHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHccCChhHCcCHHHHhc
Confidence            99999999999999999864

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.63  E-value=5.9e-17  Score=108.06  Aligned_cols=88  Identities=15%  Similarity=0.138  Sum_probs=63.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++||||+||+++||++|..||.....    ..+....        .........+.+...+..+.+|
T Consensus       176 ~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~----~~~~~~i--------~~~~~~~~~~~~~~~s~~~~~l  243 (307)
T d1a06a_         176 VAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND----AKLFEQI--------LKAEYEFDSPYWDDISDSAKDF  243 (307)
T ss_dssp             SCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHHHH--------HTTCCCCCTTTTTTSCHHHHHH
T ss_pred             cCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCH----HHHHHHH--------hccCCCCCCccccCCCHHHHHH
Confidence            799999988999999999999999999999999974311    1111100        0000111112223345678999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..||.+|||+.|+++
T Consensus       244 i~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         244 IRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             HHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHccCCHhHCcCHHHHhc
Confidence            99999999999999999976

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=7.6e-17  Score=106.62  Aligned_cols=87  Identities=16%  Similarity=0.170  Sum_probs=60.7

Q ss_pred             CCCcccc-----cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHH
Q 032213            1 MSPEWQN-----SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLE   75 (145)
Q Consensus         1 ~aPe~~~-----~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (145)
                      ||||++.     ...++.++||||+||+++||++|..||.............             ....+....+...+.
T Consensus       177 ~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~-------------~~~~~~~~~~~~~s~  243 (288)
T d2jfla1         177 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIA-------------KSEPPTLAQPSRWSS  243 (288)
T ss_dssp             CCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHH-------------HSCCCCCSSGGGSCH
T ss_pred             CCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHH-------------cCCCCCCCccccCCH
Confidence            6899884     4557899999999999999999999987542111111000             000111122334456


Q ss_pred             HHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           76 TMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        76 ~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+.+|+.+||+.||.+|||+.++++
T Consensus       244 ~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         244 NFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhc
Confidence            7899999999999999999999864

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=9.6e-17  Score=105.25  Aligned_cols=86  Identities=21%  Similarity=0.327  Sum_probs=59.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+ .++.++||||+||+++||++|..||........   +...         +..-..+ ...+......+.+|
T Consensus       180 ~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~---~~~~---------i~~~~~~-~~~~~~~~~~~~~l  245 (270)
T d1t4ha_         180 MAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ---IYRR---------VTSGVKP-ASFDKVAIPEVKEI  245 (270)
T ss_dssp             CCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH---HHHH---------HTTTCCC-GGGGGCCCHHHHHH
T ss_pred             cCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHH---HHHH---------HHcCCCC-cccCccCCHHHHHH
Confidence            79998865 699999999999999999999999864311111   1110         0000000 11122234468899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..||.+|||+.|+++
T Consensus       246 i~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         246 IEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             HHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHccCCHhHCcCHHHHhC
Confidence            99999999999999999975

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.7e-17  Score=109.81  Aligned_cols=83  Identities=13%  Similarity=0.201  Sum_probs=61.7

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++||||+||+++||++|..||... ..   ..+..            .+.......+......+.+|
T Consensus       177 ~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~-~~---~~~~~------------~i~~~~~~~p~~~s~~~~~l  240 (288)
T d1uu3a_         177 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-NE---YLIFQ------------KIIKLEYDFPEKFFPKARDL  240 (288)
T ss_dssp             CCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCS-SH---HHHHH------------HHHTTCCCCCTTCCHHHHHH
T ss_pred             cCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCc-CH---HHHHH------------HHHcCCCCCCccCCHHHHHH
Confidence            7999999889999999999999999999999999743 11   11111            11111112233345678999


Q ss_pred             HHhcccCCCCCCCCHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVI   99 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~   99 (145)
                      +.+||..||.+|||+.|++
T Consensus       241 i~~~L~~dP~~R~t~~e~~  259 (288)
T d1uu3a_         241 VEKLLVLDATKRLGCEEME  259 (288)
T ss_dssp             HHTTSCSSGGGSTTSGGGT
T ss_pred             HHHHccCCHhHCcCHHHHc
Confidence            9999999999999999864

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.62  E-value=1.3e-16  Score=105.92  Aligned_cols=97  Identities=10%  Similarity=-0.009  Sum_probs=65.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++||||||++++|+++|..|+................ .    ..   ...+........+..+.++
T Consensus       180 ~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~-~----~~---~~~~~~~~~~~~p~~~~~l  251 (299)
T d1ckia_         180 ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERIS-E----KK---MSTPIEVLCKGYPSEFATY  251 (299)
T ss_dssp             CCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHH-H----HH---HHSCHHHHTTTSCHHHHHH
T ss_pred             cCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhh-c----cc---CCCChhHhccCCCHHHHHH
Confidence            68999988889999999999999999999999997542211111111110 0    00   0001001112234668999


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhcc
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEGT  105 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~~  105 (145)
                      +..||..+|.+||++.++.+.|+.+
T Consensus       252 i~~cl~~~p~~RP~~~~i~~~l~~~  276 (299)
T d1ckia_         252 LNFCRSLRFDDKPDYSYLRQLFRNL  276 (299)
T ss_dssp             HHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHccCChhHCcCHHHHHHHHHHH
Confidence            9999999999999999988877765

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.62  E-value=8.3e-17  Score=105.88  Aligned_cols=93  Identities=20%  Similarity=0.231  Sum_probs=65.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++||||+||+++||++|..||... ....   ...   ..     +..-...........+..+.++
T Consensus       181 ~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~-~~~~---~~~---~~-----~~~~~~~~~~~~~~~s~~l~~l  248 (277)
T d1o6ya_         181 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD-SPVS---VAY---QH-----VREDPIPPSARHEGLSADLDAV  248 (277)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS-SHHH---HHH---HH-----HHCCCCCGGGTSSSCCHHHHHH
T ss_pred             cCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCc-CHHH---HHH---HH-----HhcCCCCCchhccCCCHHHHHH
Confidence            6999999888999999999999999999999998743 1111   100   00     0000000001122335678999


Q ss_pred             HHhcccCCCCCCC-CHHHHHHHhhcc
Q 032213           81 RLLCIQDEPNLRP-SMKNVILMLEGT  105 (145)
Q Consensus        81 ~~~cl~~~p~~Rp-t~~~v~~~L~~~  105 (145)
                      +.+||..||.+|| ++.++...|.++
T Consensus       249 i~~~L~~dp~~R~~sa~~l~~~l~r~  274 (277)
T d1o6ya_         249 VLKALAKNPENRYQTAAEMRADLVRV  274 (277)
T ss_dssp             HHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             HHHHccCCHhHCHhHHHHHHHHHHHH
Confidence            9999999999999 899998877654

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=4.1e-17  Score=108.66  Aligned_cols=102  Identities=15%  Similarity=0.096  Sum_probs=64.2

Q ss_pred             CCCcccccC------CcccccchhhHHHHHHHHHhCCCCCCCCCCchh-hH------hHHHHHHHHHHHhHhhhhhCcch
Q 032213            1 MSPEWQNSG------LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTAD-VV------LLSTWVYNCFIAKELNKLVGEDE   67 (145)
Q Consensus         1 ~aPe~~~~~------~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~   67 (145)
                      ||||++.+.      .++.++|||||||++||+++|..|+........ ..      ..........    .....++..
T Consensus       179 ~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~p~~  254 (303)
T d1vjya_         179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVV----CEQKLRPNI  254 (303)
T ss_dssp             CCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHH----TTSCCCCCC
T ss_pred             CChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHH----hccccCCCC
Confidence            689988643      267789999999999999999877643210000 00      0000000000    011111111


Q ss_pred             ---hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           68 ---EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        68 ---~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                         .........+.+|+.+||+.||.+|||+.+|++.|+++.
T Consensus       255 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~  296 (303)
T d1vjya_         255 PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS  296 (303)
T ss_dssp             CGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence               112345667899999999999999999999999998765

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=7e-17  Score=107.05  Aligned_cols=88  Identities=17%  Similarity=0.177  Sum_probs=62.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++||||+||+++||++|..||... ....   ......    ..    ........+...+..+.+|
T Consensus       183 ~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~-~~~~---~~~~i~----~~----~~~~~~~~~~~~s~~~~~l  250 (293)
T d1jksa_         183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD-TKQE---TLANVS----AV----NYEFEDEYFSNTSALAKDF  250 (293)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHH---HHHHHH----TT----CCCCCHHHHTTSCHHHHHH
T ss_pred             cCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCC-CHHH---HHHHHH----hc----CCCCCchhcCCCCHHHHHH
Confidence            6999999888999999999999999999999998743 1111   110000    00    0000111222335568899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..||.+|||+.+++.
T Consensus       251 i~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         251 IRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             HHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHccCChhHCcCHHHHhc
Confidence            99999999999999999976

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=2e-16  Score=103.76  Aligned_cols=87  Identities=15%  Similarity=0.209  Sum_probs=59.4

Q ss_pred             CCCcccccCCc-ccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLI-TVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~-~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++.+..+ +.++||||+||+++||++|..||.........  +...     ...      ..........+..+.+
T Consensus       172 ~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~--~~~~-----~~~------~~~~~~~~~~s~~~~~  238 (271)
T d1nvra_         172 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE--YSDW-----KEK------KTYLNPWKKIDSAPLA  238 (271)
T ss_dssp             SCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHH--HHHH-----HTT------CTTSTTGGGSCHHHHH
T ss_pred             cCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHH--HHHH-----hcC------CCCCCccccCCHHHHH
Confidence            79999987765 67899999999999999999998643111111  1100     000      0000111223456789


Q ss_pred             HHHhcccCCCCCCCCHHHHHH
Q 032213           80 VRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      |+.+||..||.+|||+.+++.
T Consensus       239 li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         239 LLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             HHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHcCCChhHCcCHHHHhc
Confidence            999999999999999999864

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=4.5e-16  Score=104.36  Aligned_cols=100  Identities=20%  Similarity=0.249  Sum_probs=61.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHH---------HHh--------------
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCF---------IAK--------------   57 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~--------------   57 (145)
                      ||||++.+..++.++||||+||+++||++|+.||....................         ...              
T Consensus       170 ~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (322)
T d1s9ja_         170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMA  249 (322)
T ss_dssp             CCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------------------CCCC
T ss_pred             cCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchh
Confidence            699999999999999999999999999999999975422111110000000000         000              


Q ss_pred             ---HhhhhhCcch-hhc-HHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           58 ---ELNKLVGEDE-EVD-LRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        58 ---~~~~~~~~~~-~~~-~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                         ....+..... ..+ ......+.+|+.+||..||.+|||+.++++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~  297 (322)
T d1s9ja_         250 IFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  297 (322)
T ss_dssp             HHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence               0000000000 000 012356889999999999999999999976

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=1.1e-16  Score=106.58  Aligned_cols=99  Identities=16%  Similarity=0.081  Sum_probs=62.8

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhh-------hhhC-----cchh
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN-------KLVG-----EDEE   68 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-----~~~~   68 (145)
                      ||||++.+..++.++|+||+||+++||++|..||.... .......+...........+.       ....     ....
T Consensus       182 ~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
T d1blxa_         182 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS-DVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEK  260 (305)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGG
T ss_pred             cCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCC-HHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhh
Confidence            69999999999999999999999999999999997541 111111110000000000000       0000     0001


Q ss_pred             hcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           69 VDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        69 ~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ........+.+|+.+||+.||.+|||+.|++.
T Consensus       261 ~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         261 FVTDIDELGKDLLLKCLTFNPAKRISAYSALS  292 (305)
T ss_dssp             TCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            12223456789999999999999999999976

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=3e-16  Score=105.73  Aligned_cols=88  Identities=16%  Similarity=0.175  Sum_probs=62.2

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcch----hhcHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDE----EVDLRTLET   76 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~   76 (145)
                      ||||++.+..|+.++|+||+||++++|++|..||...........+.            ..+.....    ......+..
T Consensus       180 ~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~------------~~i~~~~~~~~~~~~~~~s~~  247 (335)
T d2ozaa1         180 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK------------TRIRMGQYEFPNPEWSEVSEE  247 (335)
T ss_dssp             CCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------------------CCCSCSSSCCTTHHHHSCHH
T ss_pred             CCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHH------------HHHhcCCCCCCCcccccCCHH
Confidence            79999998899999999999999999999999996431111110000            00111100    112234567


Q ss_pred             HHHHHHhcccCCCCCCCCHHHHHH
Q 032213           77 MVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        77 ~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+|+.+||..||.+||++.+++.
T Consensus       248 ~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         248 VKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHccCChhHCcCHHHHHc
Confidence            899999999999999999999986

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.58  E-value=2.7e-16  Score=106.57  Aligned_cols=89  Identities=16%  Similarity=0.109  Sum_probs=62.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++||||+||++++|++|..||... ...   .......    ...    ...........+..+.+|
T Consensus       192 ~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~-~~~---~~~~~i~----~~~----~~~~~~~~~~~s~~~~~l  259 (350)
T d1koaa2         192 AAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE-NDD---ETLRNVK----SCD----WNMDDSAFSGISEDGKDF  259 (350)
T ss_dssp             CCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCS-SHH---HHHHHHH----HTC----CCSCCGGGGGCCHHHHHH
T ss_pred             cCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCC-CHH---HHHHHHH----hCC----CCCCcccccCCCHHHHHH
Confidence            7999999989999999999999999999999998643 111   1111100    000    000011122335568999


Q ss_pred             HHhcccCCCCCCCCHHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      +.+||..||.+|||+.+++..
T Consensus       260 i~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         260 IRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             HHHHCCSSGGGSCCHHHHHHS
T ss_pred             HHHHccCChhHCcCHHHHhcC
Confidence            999999999999999999873

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.58  E-value=2.3e-16  Score=105.21  Aligned_cols=86  Identities=20%  Similarity=0.186  Sum_probs=59.2

Q ss_pred             CCCccccc---CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHH
Q 032213            1 MSPEWQNS---GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETM   77 (145)
Q Consensus         1 ~aPe~~~~---~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (145)
                      ||||++.+   +.|+.++|||||||+++||++|..||...... .   .....   . ...    . +. ..+...+..+
T Consensus       178 ~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~-~---~~~~i---~-~~~----~-~~-~~~~~~s~~~  243 (309)
T d1u5ra_         178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-S---ALYHI---A-QNE----S-PA-LQSGHWSEYF  243 (309)
T ss_dssp             CCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-H---HHHHH---H-HSC----C-CC-CSCTTSCHHH
T ss_pred             cCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHH-H---HHHHH---H-hCC----C-CC-CCCCCCCHHH
Confidence            79999863   45889999999999999999999998643111 1   00000   0 000    0 00 0111234578


Q ss_pred             HHHHHhcccCCCCCCCCHHHHHH
Q 032213           78 VRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        78 ~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+|+.+||..||.+|||+.+++.
T Consensus       244 ~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         244 RNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHCcCChhHCcCHHHHHh
Confidence            99999999999999999999975

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.56  E-value=3.6e-16  Score=105.96  Aligned_cols=88  Identities=16%  Similarity=0.090  Sum_probs=62.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++||||+||++++|++|..||.....    ........    ..    ............+..+.+|
T Consensus       195 ~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~----~~~~~~i~----~~----~~~~~~~~~~~~s~~~~~l  262 (352)
T d1koba_         195 AAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD----LETLQNVK----RC----DWEFDEDAFSSVSPEAKDF  262 (352)
T ss_dssp             CCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH----HHHHHHHH----HC----CCCCCSSTTTTSCHHHHHH
T ss_pred             cCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHH----hC----CCCCCcccccCCCHHHHHH
Confidence            699999998999999999999999999999999974311    11111000    00    0000111222345678999


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||+.||.+|||+.+++.
T Consensus       263 i~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         263 IKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             HHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHHccCChhHCcCHHHHhc
Confidence            99999999999999999976

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.6e-15  Score=102.25  Aligned_cols=84  Identities=19%  Similarity=0.226  Sum_probs=62.1

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++|+||+||+++||++|..||... .   ...+...            +.......|...+..+.+|
T Consensus       172 ~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~-~---~~~~~~~------------i~~~~~~~p~~~s~~~~dl  235 (337)
T d1o6la_         172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-D---HERLFEL------------ILMEEIRFPRTLSPEAKSL  235 (337)
T ss_dssp             CCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS-S---HHHHHHH------------HHHCCCCCCTTSCHHHHHH
T ss_pred             hhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCc-C---HHHHHHH------------HhcCCCCCCccCCHHHHHH
Confidence            7999999999999999999999999999999998754 1   1111111            1111122333445678999


Q ss_pred             HHhcccCCCCCCCC-----HHHHHH
Q 032213           81 RLLCIQDEPNLRPS-----MKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt-----~~~v~~  100 (145)
                      +.+||+.||.+|++     +.+++.
T Consensus       236 i~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         236 LAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHhhccCCchhhcccccccHHHHHc
Confidence            99999999999995     777765

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.55  E-value=7.7e-16  Score=104.29  Aligned_cols=84  Identities=13%  Similarity=0.114  Sum_probs=61.5

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++|+||+||+++||++|..||... .   ...+...            +.......+...+..+.+|
T Consensus       205 ~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~-~---~~~~~~~------------i~~~~~~~p~~~s~~~~~l  268 (350)
T d1rdqe_         205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD-Q---PIQIYEK------------IVSGKVRFPSHFSSDLKDL  268 (350)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-S---HHHHHHH------------HHHCCCCCCTTCCHHHHHH
T ss_pred             CCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCc-C---HHHHHHH------------HhcCCCCCCccCCHHHHHH
Confidence            7999999989999999999999999999999999743 1   1111111            1111112233345678999


Q ss_pred             HHhcccCCCCCCC-----CHHHHHH
Q 032213           81 RLLCIQDEPNLRP-----SMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rp-----t~~~v~~  100 (145)
                      +.+||..||.+|+     ++.+++.
T Consensus       269 i~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         269 LRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHhhhCHHhccccccccHHHHHc
Confidence            9999999999984     8999975

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.55  E-value=9.3e-16  Score=102.58  Aligned_cols=84  Identities=17%  Similarity=0.178  Sum_probs=61.6

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++|+||+||++++|++|..||... ..   ..+..            .+.......+...+..+.++
T Consensus       168 ~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~-~~---~~~~~------------~i~~~~~~~p~~~s~~~~~l  231 (316)
T d1fota_         168 IAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS-NT---MKTYE------------KILNAELRFPPFFNEDVKDL  231 (316)
T ss_dssp             CCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS-SH---HHHHH------------HHHHCCCCCCTTSCHHHHHH
T ss_pred             cCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCc-CH---HHHHH------------HHHcCCCCCCCCCCHHHHHH
Confidence            7999999888999999999999999999999999753 11   11110            11111112233345668899


Q ss_pred             HHhcccCCCCCCC-----CHHHHHH
Q 032213           81 RLLCIQDEPNLRP-----SMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rp-----t~~~v~~  100 (145)
                      +.+||..||.+|+     ++.+++.
T Consensus       232 i~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         232 LSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             HHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHhhhCHHhccccchhhHHHHHc
Confidence            9999999999996     8888875

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=5.1e-16  Score=104.01  Aligned_cols=84  Identities=18%  Similarity=0.196  Sum_probs=61.3

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++|+||+||+++||++|..||... ....   +...            +.......|...+..+.+|
T Consensus       170 ~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~-~~~~---~~~~------------i~~~~~~~p~~~s~~~~dl  233 (320)
T d1xjda_         170 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ-DEEE---LFHS------------IRMDNPFYPRWLEKEAKDL  233 (320)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHH---HHHH------------HHHCCCCCCTTSCHHHHHH
T ss_pred             CCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCC-CHHH---HHHH------------HHcCCCCCCccCCHHHHHH
Confidence            6899999999999999999999999999999999754 1111   1110            1111112233345668999


Q ss_pred             HHhcccCCCCCCCCHH-HHHH
Q 032213           81 RLLCIQDEPNLRPSMK-NVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~-~v~~  100 (145)
                      +.+||..||.+||++. +++.
T Consensus       234 i~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         234 LVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             HHHHSCSSGGGSBTTBSCGGG
T ss_pred             HHHhcccCCCCCcCHHHHHHh
Confidence            9999999999999985 6753

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.53  E-value=2e-15  Score=102.74  Aligned_cols=87  Identities=17%  Similarity=0.145  Sum_probs=61.4

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++.. ..++.++|+||+||+++||++|..||..... .....+.            ..........+...+..+.+
T Consensus       172 ~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~-~~~~~~~------------~~~~~~~~~~~~~~s~~~~~  238 (364)
T d1omwa3         172 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT-KDKHEID------------RMTLTMAVELPDSFSPELRS  238 (364)
T ss_dssp             CCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCS-SCHHHHH------------HHSSSCCCCCCSSSCHHHHH
T ss_pred             chhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCH-HHHHHHH------------HhcccCCCCCCCCCCHHHHH
Confidence            69999874 5689999999999999999999999975411 1111111            11111222223334567899


Q ss_pred             HHHhcccCCCCCCCC-----HHHHHH
Q 032213           80 VRLLCIQDEPNLRPS-----MKNVIL  100 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt-----~~~v~~  100 (145)
                      |+.+||..||.+||+     +.+++.
T Consensus       239 li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         239 LLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             HHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             HHHHHcccCHHHhCCCcccCHHHHHc
Confidence            999999999999999     678864

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=4.2e-16  Score=102.31  Aligned_cols=78  Identities=21%  Similarity=0.402  Sum_probs=57.7

Q ss_pred             CCCcccccCCc-ccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHH
Q 032213            1 MSPEWQNSGLI-TVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVR   79 (145)
Q Consensus         1 ~aPe~~~~~~~-~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (145)
                      ||||++.+..+ +.++||||+||+++||++|..||...    .  ..            ..    .....+...+..+.+
T Consensus       176 ~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~----~--~i------------~~----~~~~~~~~~s~~~~~  233 (273)
T d1xwsa_         176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD----E--EI------------IR----GQVFFRQRVSSECQH  233 (273)
T ss_dssp             SCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH----H--HH------------HH----CCCCCSSCCCHHHHH
T ss_pred             CCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCc----h--HH------------hh----cccCCCCCCCHHHHH
Confidence            68999886665 56789999999999999999998632    0  00            00    001111223456899


Q ss_pred             HHHhcccCCCCCCCCHHHHHH
Q 032213           80 VRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        80 l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      |+.+||..||.+|||+.+++.
T Consensus       234 li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         234 LIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHccCCHhHCcCHHHHhc
Confidence            999999999999999999975

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.51  E-value=3.2e-14  Score=96.44  Aligned_cols=106  Identities=14%  Similarity=0.101  Sum_probs=64.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchh---hHhHHHHHHHHH--HHhHh------hhhh------
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTAD---VVLLSTWVYNCF--IAKEL------NKLV------   63 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~------~~~~------   63 (145)
                      +|||++.+..++.++|+||+||+++++++|+.||........   ...+.......-  .....      ....      
T Consensus       196 ~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  275 (362)
T d1q8ya_         196 RSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLL  275 (362)
T ss_dssp             CCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CB
T ss_pred             cChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhh
Confidence            689999888899999999999999999999999864411110   001111000000  00000      0000      


Q ss_pred             ---------------CcchhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH--hhccC
Q 032213           64 ---------------GEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILM--LEGTM  106 (145)
Q Consensus        64 ---------------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~--L~~~~  106 (145)
                                     .............+.+|+.+|+..||.+|||+.|+++.  ++...
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~  335 (362)
T d1q8ya_         276 RNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL  335 (362)
T ss_dssp             SSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             hccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCCC
Confidence                           00112234567789999999999999999999999863  54433

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=3.1e-15  Score=100.22  Aligned_cols=88  Identities=14%  Similarity=0.167  Sum_probs=61.0

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      +|||...+..++.++|+||+||++++|++|..||.... ..   ......        ...............+..+.+|
T Consensus       170 ~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~-~~---~~~~~i--------~~~~~~~~~~~~~~~s~~~~~l  237 (321)
T d1tkia_         170 YAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET-NQ---QIIENI--------MNAEYTFDEEAFKEISIEAMDF  237 (321)
T ss_dssp             SCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS-HH---HHHHHH--------HHTCCCCCHHHHTTSCHHHHHH
T ss_pred             ccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCC-HH---HHHHHH--------HhCCCCCChhhccCCCHHHHHH
Confidence            57888888889999999999999999999999987541 11   111100        0000000001111235568899


Q ss_pred             HHhcccCCCCCCCCHHHHHH
Q 032213           81 RLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      +.+||..||.+|||+.+++.
T Consensus       238 i~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         238 VDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHccCChhHCcCHHHHhc
Confidence            99999999999999999986

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.49  E-value=2e-14  Score=95.08  Aligned_cols=98  Identities=8%  Similarity=-0.013  Sum_probs=66.4

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHHHH
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMVRV   80 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   80 (145)
                      ||||++.+..++.++|+||+|++++|+++|..|+........... ...............       .....+..+..+
T Consensus       180 ~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~-~~~i~~~~~~~~~~~-------l~~~~p~~l~~i  251 (293)
T d1csna_         180 MSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQK-YERIGEKKQSTPLRE-------LCAGFPEEFYKY  251 (293)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHH-HHHHHHHHHHSCHHH-------HTTTSCHHHHHH
T ss_pred             cCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHH-HHHHHhccCCCChHH-------hcCCCCHHHHHH
Confidence            689999988899999999999999999999999975422211111 111111000000001       111234568899


Q ss_pred             HHhcccCCCCCCCCHHHHHHHhhccC
Q 032213           81 RLLCIQDEPNLRPSMKNVILMLEGTM  106 (145)
Q Consensus        81 ~~~cl~~~p~~Rpt~~~v~~~L~~~~  106 (145)
                      +..||..+|++||+...+.+.|+.+.
T Consensus       252 i~~~~~~~~~~rP~y~~l~~~l~~~~  277 (293)
T d1csna_         252 MHYARNLAFDATPDYDYLQGLFSKVL  277 (293)
T ss_dssp             HHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHhcCCcccCcCHHHHHHHHHHHH
Confidence            99999999999999988888777654

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=3.4e-15  Score=99.02  Aligned_cols=96  Identities=13%  Similarity=0.136  Sum_probs=59.8

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHH---hHhhhhh--------Ccchh
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIA---KELNKLV--------GEDEE   68 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--------~~~~~   68 (145)
                      ||||++.. ..++.++||||+||+++||++|..||... ...+.   ..........   ..+....        .....
T Consensus       167 ~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~-~~~~~---l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (299)
T d1ua2a_         167 RAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD-SDLDQ---LTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPG  242 (299)
T ss_dssp             CCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHH---HHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCC
T ss_pred             ccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCC-CHHHH---HHHHHHhcCCCChhhccchhccchhhhhccCCC
Confidence            68998864 45789999999999999999999888644 11111   1111110000   0000000        00000


Q ss_pred             hc-----HHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           69 VD-----LRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        69 ~~-----~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      .+     ......+.+|+.+||+.||.+|||+.|+++
T Consensus       243 ~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         243 IPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  279 (299)
T ss_dssp             CCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             CChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence            11     122456899999999999999999999975

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=2.3e-14  Score=97.09  Aligned_cols=100  Identities=15%  Similarity=0.104  Sum_probs=63.9

Q ss_pred             CCCcccccCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHH-----------HH---HHHh-------Hh
Q 032213            1 MSPEWQNSGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVY-----------NC---FIAK-------EL   59 (145)
Q Consensus         1 ~aPe~~~~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~-----------~~---~~~~-------~~   59 (145)
                      +|||++.+..++.++|+||+||+++++++|..||...........+.....           ..   ....       ..
T Consensus       185 ~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (355)
T d2b1pa1         185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTF  264 (355)
T ss_dssp             CCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCH
T ss_pred             cChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCcccccccc
Confidence            589999988999999999999999999999999864311111111100000           00   0000       00


Q ss_pred             hhh-----hCcchhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           60 NKL-----VGEDEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        60 ~~~-----~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ...     ..............+.+|+.+||..||.+|||+.|+++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~  310 (355)
T d2b1pa1         265 PKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  310 (355)
T ss_dssp             HHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            000     01111223345677899999999999999999999986

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=2.6e-14  Score=95.41  Aligned_cols=100  Identities=11%  Similarity=0.081  Sum_probs=59.3

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhh------------hhCcch
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNK------------LVGEDE   67 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~   67 (145)
                      +|||++.+. .++.++|+||+||+++||++|+.||...... ....................            ......
T Consensus       188 ~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (318)
T d3blha1         188 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ-HQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKR  266 (318)
T ss_dssp             CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCB
T ss_pred             hhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHH-HHHHHHHHhcCCCChhhccccchhhhhhhhcccccccc
Confidence            588988754 6889999999999999999999998754111 11111110000000000000            000000


Q ss_pred             hh-----cHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 032213           68 EV-----DLRTLETMVRVRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        68 ~~-----~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      ..     .......+.+|+.+||+.||.+|||+.|++..
T Consensus       267 ~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H  305 (318)
T d3blha1         267 KVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  305 (318)
T ss_dssp             CHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             cchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence            00     01113456789999999999999999999863

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.43  E-value=1.7e-14  Score=94.68  Aligned_cols=88  Identities=11%  Similarity=0.092  Sum_probs=58.2

Q ss_pred             CCCccccc------CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHH
Q 032213            1 MSPEWQNS------GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTL   74 (145)
Q Consensus         1 ~aPe~~~~------~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (145)
                      +|||++.+      ..++.++|+||+||++++|++|..||.... ...   .....    .....    ....+.....+
T Consensus       176 ~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~-~~~---~~~~i----~~~~~----~~~~~~~~~~s  243 (277)
T d1phka_         176 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK-QML---MLRMI----MSGNY----QFGSPEWDDYS  243 (277)
T ss_dssp             CCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHH---HHHHH----HHTCC----CCCTTTGGGSC
T ss_pred             CCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCC-HHH---HHHHH----HhCCC----CCCCcccccCC
Confidence            46777642      346788999999999999999999997541 111   11000    00000    01111222345


Q ss_pred             HHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           75 ETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        75 ~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ..+.+|+.+||..+|.+||++.++++
T Consensus       244 ~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         244 DTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHHc
Confidence            67899999999999999999999865

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=5e-13  Score=90.14  Aligned_cols=100  Identities=15%  Similarity=0.082  Sum_probs=59.7

Q ss_pred             CCCcccc-cCCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHh-----------HhhhhhCcchh
Q 032213            1 MSPEWQN-SGLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAK-----------ELNKLVGEDEE   68 (145)
Q Consensus         1 ~aPe~~~-~~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~   68 (145)
                      +|||++. +..++.++|+||+||++++|++|..||... ...................           ...........
T Consensus       179 ~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (345)
T d1pmea_         179 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK-HYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK  257 (345)
T ss_dssp             CCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCS-SHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCC
T ss_pred             chHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCC-CHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCC
Confidence            5899885 456788999999999999999999998644 1111111110000000000           00000000000


Q ss_pred             h-----cHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 032213           69 V-----DLRTLETMVRVRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        69 ~-----~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                      .     .......+.+|+.+||..||.+|||+.++++.
T Consensus       258 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         258 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             CCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             CCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            0     11123467899999999999999999999863

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.42  E-value=2.8e-14  Score=93.99  Aligned_cols=99  Identities=17%  Similarity=0.128  Sum_probs=59.2

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhh---hhhC---------cc-
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN---KLVG---------ED-   66 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---------~~-   66 (145)
                      +|||.+.+ ..++.++|+||+||+++||++|+.||.... ...................+.   ....         .. 
T Consensus       167 ~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (286)
T d1ob3a_         167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS-EADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLP  245 (286)
T ss_dssp             CCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCC
T ss_pred             hhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCC-HHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcc
Confidence            47887764 456899999999999999999999987541 111111100000000000000   0000         00 


Q ss_pred             -hhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           67 -EEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        67 -~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                       ..........+.+|+.+||+.||.+|||+.|+++
T Consensus       246 ~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         246 WESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             GGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             0112223456889999999999999999999974

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=3.4e-14  Score=95.16  Aligned_cols=88  Identities=16%  Similarity=0.202  Sum_probs=58.8

Q ss_pred             CCCcccccC--CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhhhCcchhhcHHHHHHHH
Q 032213            1 MSPEWQNSG--LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKLVGEDEEVDLRTLETMV   78 (145)
Q Consensus         1 ~aPe~~~~~--~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (145)
                      ++||.+.+.  .++.++||||+||++++|++|..||...........+...            ........+...+..+.
T Consensus       197 ~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~------------~~~~~~~~~~~~s~~~~  264 (322)
T d1vzoa_         197 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRR------------ILKSEPPYPQEMSALAK  264 (322)
T ss_dssp             CCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHH------------HHHCCCCCCTTSCHHHH
T ss_pred             chhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh------------cccCCCCCcccCCHHHH
Confidence            467777643  4678999999999999999999998754222221111110            11111223344567789


Q ss_pred             HHHHhcccCCCCCCCC-----HHHHHH
Q 032213           79 RVRLLCIQDEPNLRPS-----MKNVIL  100 (145)
Q Consensus        79 ~l~~~cl~~~p~~Rpt-----~~~v~~  100 (145)
                      +|+.+||..||.+|++     +.|+++
T Consensus       265 ~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         265 DLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             HHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             HHHHHHcccCHHHcCCCCcccHHHHHc
Confidence            9999999999999994     788875

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=2.2e-13  Score=91.94  Aligned_cols=105  Identities=16%  Similarity=0.085  Sum_probs=63.3

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHH-----------hHhhhhh----C
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIA-----------KELNKLV----G   64 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~----~   64 (145)
                      +|||++.+ ..++.++|+||+||++++|++|..|+...... ...............           .......    .
T Consensus       185 ~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (346)
T d1cm8a_         185 RAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEK  263 (346)
T ss_dssp             CCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCC
T ss_pred             cCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChH-HHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccc
Confidence            68998875 45688999999999999999999998754111 111111000000000           0000000    0


Q ss_pred             cch-hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH--hhccC
Q 032213           65 EDE-EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILM--LEGTM  106 (145)
Q Consensus        65 ~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~--L~~~~  106 (145)
                      ... .........+.+|+.+||..||.+|||+.+++..  ++.+.
T Consensus       264 ~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~  308 (346)
T d1cm8a_         264 KDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  308 (346)
T ss_dssp             CCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             cchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence            000 1112234567899999999999999999999873  55544

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=7.4e-14  Score=92.51  Aligned_cols=100  Identities=18%  Similarity=0.107  Sum_probs=59.0

Q ss_pred             CCCcccccCC-cccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhh---hhC------cch---
Q 032213            1 MSPEWQNSGL-ITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNK---LVG------EDE---   67 (145)
Q Consensus         1 ~aPe~~~~~~-~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------~~~---   67 (145)
                      +|||.+.... ++.++|+||+||++++|++|+.||... .......................   ...      ...   
T Consensus       169 ~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (298)
T d1gz8a_         169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD  247 (298)
T ss_dssp             CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCS-SHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCC
T ss_pred             eehhhhccccCCCccccccccchhhhHHhhCCCCCCCC-CHHHHHHHHHHhcCCCchhhccccccccccccccccccccc
Confidence            5788776544 578999999999999999999998743 11111110000000000000000   000      000   


Q ss_pred             --hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 032213           68 --EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVILM  101 (145)
Q Consensus        68 --~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~~  101 (145)
                        .........+.+|+.+||..||.+|||+.|+++.
T Consensus       248 ~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H  283 (298)
T d1gz8a_         248 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH  283 (298)
T ss_dssp             HHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence              0011224568899999999999999999999863

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=5.3e-14  Score=92.76  Aligned_cols=100  Identities=13%  Similarity=0.043  Sum_probs=59.5

Q ss_pred             CCCcccccCC-cccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhh---hhhC-----------c
Q 032213            1 MSPEWQNSGL-ITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELN---KLVG-----------E   65 (145)
Q Consensus         1 ~aPe~~~~~~-~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-----------~   65 (145)
                      +|||++.... ++.++|+||+||+++||++|+.|+........................+.   ....           .
T Consensus       168 ~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (292)
T d1unla_         168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTS  247 (292)
T ss_dssp             CCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCC
T ss_pred             hhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccch
Confidence            3677766444 68899999999999999999999764422222221111110000000000   0000           0


Q ss_pred             chhhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           66 DEEVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        66 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                      ...........+.+|+.+||+.||.+|||+.|++.
T Consensus       248 ~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         248 LVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             CTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            00112233456889999999999999999999975

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=1.6e-13  Score=92.82  Aligned_cols=104  Identities=15%  Similarity=0.121  Sum_probs=62.3

Q ss_pred             CCCccccc-CCcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHhHhhhh----hCcc---h-----
Q 032213            1 MSPEWQNS-GLITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAKELNKL----VGED---E-----   67 (145)
Q Consensus         1 ~aPe~~~~-~~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---~-----   67 (145)
                      +|||.+.+ ..++.++||||+||+++||++|..||...........+...... .....+...    ....   .     
T Consensus       189 ~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (350)
T d1q5ka_         189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT-PTREQIREMNPNYTEFKFPQIKAHPW  267 (350)
T ss_dssp             CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCC-CCHHHHHHHCC---CCCCCCCCCCCG
T ss_pred             cChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCC-ChHHhhhhhccchhhccccccccCch
Confidence            57887764 56899999999999999999999998754211111111110000 000000000    0000   0     


Q ss_pred             --hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH--Hhhcc
Q 032213           68 --EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL--MLEGT  105 (145)
Q Consensus        68 --~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~--~L~~~  105 (145)
                        .........+.+|+.+||..||.+|||+.|+++  .++.+
T Consensus       268 ~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  309 (350)
T d1q5ka_         268 TKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL  309 (350)
T ss_dssp             GGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             hhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccc
Confidence              011123456889999999999999999999986  35544

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=7.2e-13  Score=89.33  Aligned_cols=99  Identities=14%  Similarity=0.104  Sum_probs=59.1

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHHHh-----------HhhhhhCcch-
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFIAK-----------ELNKLVGEDE-   67 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~-   67 (145)
                      +|||...+. .++.++|+||+||++++|++|..||...........+.... ......           .......... 
T Consensus       185 ~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (348)
T d2gfsa1         185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV-GTPGAELLKKISSESARNYIQSLTQMPK  263 (348)
T ss_dssp             SCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH-CCCCHHHHTTCCCHHHHHHHTTSCCCCC
T ss_pred             cCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhc-CCCChHHhhhccchhhhhhhhhcccCCC
Confidence            578876544 46889999999999999999999987541111111111000 000000           0000000000 


Q ss_pred             ----hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 ----EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 ----~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                          .........+.+|+.+||..||.+|||+.|++.
T Consensus       264 ~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~  300 (348)
T d2gfsa1         264 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  300 (348)
T ss_dssp             CCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence                011123456789999999999999999999986

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.32  E-value=7.8e-13  Score=88.54  Aligned_cols=100  Identities=13%  Similarity=0.117  Sum_probs=61.3

Q ss_pred             CCCcccccC-CcccccchhhHHHHHHHHHhCCCCCCCCCCchhhHhHHHHHHHHHH-HhH-----------hhhhhCcch
Q 032213            1 MSPEWQNSG-LITVKSDVYSFGVVLLEIVCCRSNFEVNVSTADVVLLSTWVYNCFI-AKE-----------LNKLVGEDE   67 (145)
Q Consensus         1 ~aPe~~~~~-~~~~~~dv~s~g~v~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----------~~~~~~~~~   67 (145)
                      +|||.+.+. .++.++|+||+|++++++++|..|+..................... ...           .........
T Consensus       196 ~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (328)
T d3bqca1         196 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHS  275 (328)
T ss_dssp             CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCC
T ss_pred             cCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhccccc
Confidence            588987754 4789999999999999999999998754332222211111100000 000           000000000


Q ss_pred             ----------hhcHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 032213           68 ----------EVDLRTLETMVRVRLLCIQDEPNLRPSMKNVIL  100 (145)
Q Consensus        68 ----------~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~v~~  100 (145)
                                .........+.+|+.+||..||.+|||+.|+++
T Consensus       276 ~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         276 RKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             CCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                      011123456889999999999999999999976