BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032215
MMSLLMNTANPWKRMEHGPDIWNCKQLLLLHIVIYAFIGSYHDGEHYNGVRLKEDSCIGS
ARPIIIKADADISAASIQSKTVTSKLKGAAGIINAGSIKLVMAGSGCENSEKVEEVLLQV
GGDVDAAIEFLIAEQGTEEYSVKKQ

High Scoring Gene Products

Symbol, full name Information P value
AT5G67170 protein from Arabidopsis thaliana 3.6e-25

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032215
        (145 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2155588 - symbol:AT5G67170 species:3702 "Arabi...   286  3.6e-25   1


>TAIR|locus:2155588 [details] [associations]
            symbol:AT5G67170 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
            evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
            [GO:0008234 "cysteine-type peptidase activity" evidence=ISS]
            Pfam:PF02338 EMBL:CP002688 GO:GO:0006508 GO:GO:0008233
            InterPro:IPR003323 PROSITE:PS50802 InterPro:IPR004027 Pfam:PF02810
            UniGene:At.28821 UniGene:At.28822 MEROPS:C85.003 EMBL:JQ013452
            IPI:IPI00548219 RefSeq:NP_201518.2 ProteinModelPortal:F4K3M5
            SMR:F4K3M5 PRIDE:F4K3M5 EnsemblPlants:AT5G67170.1 GeneID:836852
            KEGG:ath:AT5G67170 KO:K13717 OMA:NREMFEP Uniprot:F4K3M5
        Length = 375

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 59/101 (58%), Positives = 69/101 (68%)

Query:    40 SYHDGEHYNGVRLKEDSCIGSARPXXXXXXXXXXXXXXQSKTVTSKLKGAAGI--INAGS 97
             SYHDGEHYN VR KED+C G ARP              Q+K   SK K  A    +NAG+
Sbjct:   148 SYHDGEHYNSVRSKEDACGGPARPVVIEADAKVSAASKQAKATESKSKNKADKCHVNAGA 207

Query:    98 IKLVMAGSGCENSEKVEEVLLQVGGDVDAAIEFLIAEQGTE 138
             IK+VM+GS C+N+EK E+VLLQV GDVDAAIEFLIA+QG E
Sbjct:   208 IKVVMSGSCCDNTEKAEQVLLQVNGDVDAAIEFLIADQGME 248


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.133   0.391    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      145       131   0.00091  102 3  11 22  0.43    31
                                                     29  0.42    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  575 (61 KB)
  Total size of DFA:  136 KB (2085 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  10.53u 0.12s 10.65t   Elapsed:  00:00:00
  Total cpu time:  10.53u 0.12s 10.65t   Elapsed:  00:00:01
  Start:  Fri May 10 21:30:35 2013   End:  Fri May 10 21:30:36 2013

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