Your job contains 1 sequence.
>032216
MALNLKTTIHHSPLASSSRQFINGFSPKPTSMSFSRSSSLKGFGTQIAIERKERLSFVQT
EAVRHLTGFLTKNEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSF
EIGVVAQQLGKSGKYTAVLCIGAVV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 032216
(145 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2051739 - symbol:COS1 "AT2G44050" species:3702... 442 1.1e-41 1
TIGR_CMR|DET_1187 - symbol:DET_1187 "6,7-dimethyl-8-ribit... 227 6.5e-19 1
TIGR_CMR|BA_4334 - symbol:BA_4334 "6,7-dimethyl-8-ribityl... 201 3.7e-16 1
TIGR_CMR|GSU_1691 - symbol:GSU_1691 "6,7-dimethyl-8-ribit... 186 1.4e-14 1
TIGR_CMR|CHY_1472 - symbol:CHY_1472 "6,7-dimethyl-8-ribit... 185 1.8e-14 1
UNIPROTKB|P61714 - symbol:ribE "RibE" species:83333 "Esch... 182 3.8e-14 1
TIGR_CMR|CBU_0648 - symbol:CBU_0648 "6,7-dimethyl-8-ribit... 162 5.0e-12 1
TIGR_CMR|CPS_1531 - symbol:CPS_1531 "6,7-dimethyl-8-ribit... 162 5.0e-12 1
TIGR_CMR|SO_3466 - symbol:SO_3466 "6,7-dimethyl-8-ribityl... 162 5.0e-12 1
TIGR_CMR|CJE_0432 - symbol:CJE_0432 "6,7-dimethyl-8-ribit... 161 6.4e-12 1
TIGR_CMR|VC_2268 - symbol:VC_2268 "6,7-dimethyl-8-ribityl... 157 1.7e-11 1
TIGR_CMR|ECH_0783 - symbol:ECH_0783 "6,7-dimethyl-8-ribit... 119 1.8e-07 1
POMBASE|SPBC409.13 - symbol:SPBC409.13 "6,7-dimethyl-8-ri... 113 7.8e-07 1
TIGR_CMR|SPO_0268 - symbol:SPO_0268 "riboflavin synthase,... 108 7.8e-06 1
ASPGD|ASPL0000028987 - symbol:riboG species:162425 "Emeri... 103 9.0e-05 1
>TAIR|locus:2051739 [details] [associations]
symbol:COS1 "AT2G44050" species:3702 "Arabidopsis
thaliana" [GO:0000906 "6,7-dimethyl-8-ribityllumazine synthase
activity" evidence=IGI;ISS] [GO:0009231 "riboflavin biosynthetic
process" evidence=IEA;IGI;ISS] [GO:0009349 "riboflavin synthase
complex" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=IGI] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0006007 "glucose catabolic process" evidence=RCA]
InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275 GO:GO:0009570
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016740 EMBL:AC004005
GO:GO:0009231 GO:GO:0009867 eggNOG:COG0054 KO:K00794 GO:GO:0009349
GO:GO:0000906 Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
TIGRFAMs:TIGR00114 OMA:GRFNSFI EMBL:AF148649 EMBL:AY050913
EMBL:AY091343 IPI:IPI00529546 PIR:T00685 RefSeq:NP_181933.1
UniGene:At.11483 ProteinModelPortal:O80575 SMR:O80575 IntAct:O80575
STRING:O80575 PaxDb:O80575 PRIDE:O80575 EnsemblPlants:AT2G44050.1
GeneID:819010 KEGG:ath:AT2G44050 GeneFarm:2212 TAIR:At2g44050
HOGENOM:HOG000229249 InParanoid:O80575 PhylomeDB:O80575
ProtClustDB:PLN02404 BioCyc:MetaCyc:AT2G44050-MONOMER
Genevestigator:O80575 GermOnline:AT2G44050 InterPro:IPR017420
PIRSF:PIRSF038166 Uniprot:O80575
Length = 227
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 93/145 (64%), Positives = 113/145 (77%)
Query: 3 LNLKTTIHH--SPLASSSRQFINGFSPKPTSMSFSRSSSLKGFGTQIAIERKERLSFVQT 60
L L T H + SSS +I+G S S + S SSS GF + +A+E++ R SFVQT
Sbjct: 10 LRLIPTAHRQLNSRQSSSACYIHGGSSVNKSNNLSFSSSTSGFASPLAVEKELRSSFVQT 69
Query: 61 EAVRHLTGFLTKNEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSF 120
AVRH+TG L + EGLRFA+VVARFNE+VTKLLLEGA+ETFKKYSV+EE+I+V+WVPGSF
Sbjct: 70 AAVRHVTGSLIRGEGLRFAIVVARFNEVVTKLLLEGAIETFKKYSVREEDIEVIWVPGSF 129
Query: 121 EIGVVAQQLGKSGKYTAVLCIGAVV 145
EIGVVAQ LGKSGK+ AVLCIGAV+
Sbjct: 130 EIGVVAQNLGKSGKFHAVLCIGAVI 154
>TIGR_CMR|DET_1187 [details] [associations]
symbol:DET_1187 "6,7-dimethyl-8-ribityllumazine synthase"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
GO:GO:0016740 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0009231
eggNOG:COG0054 KO:K00794 GO:GO:0009349 Gene3D:3.40.50.960
PANTHER:PTHR21058 SUPFAM:SSF52121 TIGRFAMs:TIGR00114 OMA:GRFNSFI
HOGENOM:HOG000229249 ProtClustDB:PRK00061 HSSP:Q9UUB1
RefSeq:YP_181900.1 ProteinModelPortal:Q3Z799 SMR:Q3Z799
STRING:Q3Z799 GeneID:3229536 KEGG:det:DET1187 PATRIC:21609409
BioCyc:DETH243164:GJNF-1188-MONOMER Uniprot:Q3Z799
Length = 155
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 42/82 (51%), Positives = 61/82 (74%)
Query: 64 RHLTGFLTKNEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIG 123
+ +G L +GL+ ALVV+RFNE +T LL GA ++ +++ V +N DV WVPG+FEI
Sbjct: 3 KEFSGVLN-GQGLKVALVVSRFNEFITSKLLSGAKDSLERHGVSADNTDVAWVPGAFEIP 61
Query: 124 VVAQQLGKSGKYTAVLCIGAVV 145
+VAQ+L KSG+Y AV+C+GAV+
Sbjct: 62 LVAQKLAKSGRYDAVICLGAVI 83
>TIGR_CMR|BA_4334 [details] [associations]
symbol:BA_4334 "6,7-dimethyl-8-ribityllumazine synthase"
species:198094 "Bacillus anthracis str. Ames" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0016740
GO:GO:0009231 eggNOG:COG0054 HOGENOM:HOG000229253 KO:K00794
GO:GO:0009349 Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
TIGRFAMs:TIGR00114 OMA:GRFNSFI RefSeq:NP_846567.1
RefSeq:YP_020980.1 RefSeq:YP_030271.1 PDB:1VSW PDB:1VSX PDB:3JV8
PDBsum:1VSW PDBsum:1VSX PDBsum:3JV8 ProteinModelPortal:Q81MB5
SMR:Q81MB5 DNASU:1087551 EnsemblBacteria:EBBACT00000008556
EnsemblBacteria:EBBACT00000015171 EnsemblBacteria:EBBACT00000022183
GeneID:1087551 GeneID:2815209 GeneID:2850962 KEGG:ban:BA_4334
KEGG:bar:GBAA_4334 KEGG:bat:BAS4021 ProtClustDB:PRK00061
BioCyc:BANT260799:GJAJ-4078-MONOMER
BioCyc:BANT261594:GJ7F-4218-MONOMER Uniprot:Q81MB5
Length = 153
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 36/71 (50%), Positives = 53/71 (74%)
Query: 75 GLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGK 134
GL+ +VV RFNE +T LL GAL+ K++ V+E +IDV WVPG+FEI ++A+++ SGK
Sbjct: 11 GLKVGVVVGRFNEFITSKLLGGALDGLKRHGVEENDIDVAWVPGAFEIPLIAKKMANSGK 70
Query: 135 YTAVLCIGAVV 145
Y AV+ +G V+
Sbjct: 71 YDAVITLGTVI 81
>TIGR_CMR|GSU_1691 [details] [associations]
symbol:GSU_1691 "6,7-dimethyl-8-ribityllumazine synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
GO:GO:0016740 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0009231
eggNOG:COG0054 HOGENOM:HOG000229253 KO:K00794 GO:GO:0009349
Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
TIGRFAMs:TIGR00114 OMA:GRFNSFI ProtClustDB:PRK00061
RefSeq:NP_952742.1 ProteinModelPortal:P61723 SMR:P61723
GeneID:2687086 KEGG:gsu:GSU1691 PATRIC:22026231
BioCyc:GSUL243231:GH27-1721-MONOMER Uniprot:P61723
Length = 155
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 38/82 (46%), Positives = 56/82 (68%)
Query: 64 RHLTGFLTKNEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIG 123
R + G L GLRF ++V+RFN + + LLEGAL+ ++ + +IDVV VPG+FEI
Sbjct: 3 RFIEGKLDAT-GLRFGIIVSRFNSFIGERLLEGALDALVRHGGDDGDIDVVRVPGAFEIP 61
Query: 124 VVAQQLGKSGKYTAVLCIGAVV 145
+ AQ+L + G Y AV+C+GAV+
Sbjct: 62 LTAQKLVQKGNYDAVICLGAVI 83
>TIGR_CMR|CHY_1472 [details] [associations]
symbol:CHY_1472 "6,7-dimethyl-8-ribityllumazine synthase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000906 "6,7-dimethyl-8-ribityllumazine synthase activity"
evidence=ISS] [GO:0009231 "riboflavin biosynthetic process"
evidence=ISS] HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885
UniPathway:UPA00275 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0016740 GO:GO:0009231 eggNOG:COG0054 KO:K00794 GO:GO:0009349
Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
TIGRFAMs:TIGR00114 OMA:GRFNSFI HOGENOM:HOG000229249
RefSeq:YP_360304.1 ProteinModelPortal:Q3AC30 SMR:Q3AC30
STRING:Q3AC30 GeneID:3727825 KEGG:chy:CHY_1472 PATRIC:21276075
BioCyc:CHYD246194:GJCN-1471-MONOMER Uniprot:Q3AC30
Length = 152
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 33/72 (45%), Positives = 53/72 (73%)
Query: 74 EGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSG 133
+GL+ ++V+RFNE +T+ LL GAL+ ++ V+ NIDV+WVPG+FEI +VA++
Sbjct: 11 KGLKIGIIVSRFNEFITQKLLAGALDCLTRHEVENTNIDVIWVPGAFEIPLVAKRAVHKD 70
Query: 134 KYTAVLCIGAVV 145
Y A++C+GAV+
Sbjct: 71 -YDAIICLGAVI 81
>UNIPROTKB|P61714 [details] [associations]
symbol:ribE "RibE" species:83333 "Escherichia coli K-12"
[GO:0009349 "riboflavin synthase complex" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0009231 "riboflavin
biosynthetic process" evidence=IEA] [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=IDA]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0016740 EMBL:U82664 GO:GO:0009231
EMBL:X64395 eggNOG:COG0054 KO:K00794 GO:GO:0009349 GO:GO:0000906
Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
TIGRFAMs:TIGR00114 BRENDA:2.5.1.9 ProtClustDB:PRK00061 PIR:S26202
RefSeq:NP_414949.1 RefSeq:YP_488707.1 ProteinModelPortal:P61714
SMR:P61714 IntAct:P61714 MINT:MINT-1225919 SWISS-2DPAGE:P61714
PaxDb:P61714 PRIDE:P61714 EnsemblBacteria:EBESCT00000003525
EnsemblBacteria:EBESCT00000014873 GeneID:12930511 GeneID:946453
KEGG:ecj:Y75_p0403 KEGG:eco:b0415 PATRIC:32115979 EchoBASE:EB1298
EcoGene:EG11322 HOGENOM:HOG000229250 OMA:TALEMVS
BioCyc:EcoCyc:LUMAZINESYN-MONOMER BioCyc:ECOL316407:JW0405-MONOMER
BioCyc:MetaCyc:LUMAZINESYN-MONOMER Genevestigator:P61714
Uniprot:P61714
Length = 156
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 34/70 (48%), Positives = 49/70 (70%)
Query: 77 RFALVVARFNELVTKLLLEGALETFKKYS-VKEENIDVVWVPGSFEIGVVAQQLGKSGKY 135
R A+ +ARFN + LLEGA++ K+ VK+ENI VVWVPG++E+ + A L K+GKY
Sbjct: 14 RVAITIARFNNFINDSLLEGAIDALKRIGQVKDENITVVWVPGAYELPLAAGALAKTGKY 73
Query: 136 TAVLCIGAVV 145
AV+ +G V+
Sbjct: 74 DAVIALGTVI 83
>TIGR_CMR|CBU_0648 [details] [associations]
symbol:CBU_0648 "6,7-dimethyl-8-ribityllumazine synthase"
species:227377 "Coxiella burnetii RSA 493" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
GO:GO:0016740 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0009231
eggNOG:COG0054 KO:K00794 GO:GO:0009349 Gene3D:3.40.50.960
PANTHER:PTHR21058 SUPFAM:SSF52121 TIGRFAMs:TIGR00114 OMA:GRFNSFI
HOGENOM:HOG000229249 ProtClustDB:PRK00061 RefSeq:NP_819678.1
ProteinModelPortal:Q83DP8 PRIDE:Q83DP8 GeneID:1208533
KEGG:cbu:CBU_0648 PATRIC:17929975
BioCyc:CBUR227377:GJ7S-645-MONOMER Uniprot:Q83DP8
Length = 151
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 31/69 (44%), Positives = 47/69 (68%)
Query: 77 RFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYT 136
+ A+VV++FN VT+ LL G L+ + V+ I VWVPG+ EI ++A++L KS Y
Sbjct: 7 KLAIVVSQFNRAVTEKLLNGVLQRLTELGVQANQIKTVWVPGAVEIPLLAKRLAKSKHYQ 66
Query: 137 AVLCIGAVV 145
AV+C+GAV+
Sbjct: 67 AVVCLGAVI 75
>TIGR_CMR|CPS_1531 [details] [associations]
symbol:CPS_1531 "6,7-dimethyl-8-ribityllumazine synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0009231
"riboflavin biosynthetic process" evidence=ISS] HAMAP:MF_00178
InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275 GO:GO:0016740
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0009231
eggNOG:COG0054 KO:K00794 GO:GO:0009349 Gene3D:3.40.50.960
PANTHER:PTHR21058 SUPFAM:SSF52121 TIGRFAMs:TIGR00114 OMA:GRFNSFI
HOGENOM:HOG000229249 ProtClustDB:PRK00061 RefSeq:YP_268273.1
HSSP:Q9UUB1 ProteinModelPortal:Q485J2 SMR:Q485J2 STRING:Q485J2
GeneID:3519446 KEGG:cps:CPS_1531 PATRIC:21466269
BioCyc:CPSY167879:GI48-1612-MONOMER Uniprot:Q485J2
Length = 154
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 29/73 (39%), Positives = 54/73 (73%)
Query: 74 EGLRFALVVARFNELVTKLLLEGALETFKKY-SVKEENIDVVWVPGSFEIGVVAQQLGKS 132
+G +FA+VV+RFN + LL+GA++ K++ +V +E+I +V VPG++E+ + A+++ K
Sbjct: 11 KGKKFAIVVSRFNHFIVDSLLDGAVDALKRHGNVNDEDITIVRVPGAYELPLAAKKIAKK 70
Query: 133 GKYTAVLCIGAVV 145
G+ A++ IGAV+
Sbjct: 71 GEADAIIAIGAVI 83
>TIGR_CMR|SO_3466 [details] [associations]
symbol:SO_3466 "6,7-dimethyl-8-ribityllumazine synthase"
species:211586 "Shewanella oneidensis MR-1" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
GO:GO:0016740 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0009231
eggNOG:COG0054 KO:K00794 GO:GO:0009349 Gene3D:3.40.50.960
PANTHER:PTHR21058 SUPFAM:SSF52121 TIGRFAMs:TIGR00114 OMA:GRFNSFI
HOGENOM:HOG000229249 ProtClustDB:PRK00061 RefSeq:NP_719015.1
ProteinModelPortal:Q8EBP3 SMR:Q8EBP3 GeneID:1171142
KEGG:son:SO_3466 PATRIC:23526628 Uniprot:Q8EBP3
Length = 158
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 30/70 (42%), Positives = 51/70 (72%)
Query: 77 RFALVVARFNELVTKLLLEGALETFKKYS-VKEENIDVVWVPGSFEIGVVAQQLGKSGKY 135
+ A+V++RFN + + LLEGAL+T K++ V +ENI VV VPG+ E+ + A+++ SGK+
Sbjct: 14 KVAIVISRFNSFLVESLLEGALDTLKRFGQVSDENITVVRVPGAVELPLAARRVAASGKF 73
Query: 136 TAVLCIGAVV 145
++ +GAV+
Sbjct: 74 DGIIALGAVI 83
>TIGR_CMR|CJE_0432 [details] [associations]
symbol:CJE_0432 "6,7-dimethyl-8-ribityllumazine synthase"
species:195099 "Campylobacter jejuni RM1221" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
GO:GO:0016740 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0009231
eggNOG:COG0054 KO:K00794 GO:GO:0009349 Gene3D:3.40.50.960
PANTHER:PTHR21058 SUPFAM:SSF52121 TIGRFAMs:TIGR00114
HOGENOM:HOG000229249 ProtClustDB:PRK00061 RefSeq:YP_178451.1
HSSP:O66529 ProteinModelPortal:Q5HW84 SMR:Q5HW84 STRING:Q5HW84
GeneID:3231194 KEGG:cjr:CJE0432 PATRIC:20042564 OMA:IVSMESA
BioCyc:CJEJ195099:GJC0-437-MONOMER Uniprot:Q5HW84
Length = 154
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 29/80 (36%), Positives = 52/80 (65%)
Query: 66 LTGFLTKNEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVV 125
+ G L + + A++ ARFN ++T L+EGA + F ++ KEEN+ ++ VPG+FE+
Sbjct: 4 IEGKLNLDSNTKIAIINARFNHIITDRLVEGAKDAFLRHGGKEENLSLILVPGAFELPYA 63
Query: 126 AQQLGKSGKYTAVLCIGAVV 145
++ +S K+ A+ C+GAV+
Sbjct: 64 LKKAIESKKFDAICCVGAVI 83
>TIGR_CMR|VC_2268 [details] [associations]
symbol:VC_2268 "6,7-dimethyl-8-ribityllumazine synthase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
GO:GO:0016740 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0009231
eggNOG:COG0054 KO:K00794 OMA:TLAMIET GO:GO:0009349
Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
TIGRFAMs:TIGR00114 ProtClustDB:PRK00061 PIR:C82098
RefSeq:NP_231899.2 ProteinModelPortal:Q9KPU4 SMR:Q9KPU4
DNASU:2613190 GeneID:2613190 KEGG:vch:VC2268 PATRIC:20083577
Uniprot:Q9KPU4
Length = 156
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 30/79 (37%), Positives = 53/79 (67%)
Query: 68 GFLTKNEGLRFALVVARFNELVTKLLLEGALETFKKYS-VKEENIDVVWVPGSFEIGVVA 126
GF N + A+V++RFN + + LL GA++T K++ + ++NI VV PG+ E+ +VA
Sbjct: 7 GFPAPNA--KIAIVISRFNSFINESLLSGAIDTLKRHGQISDDNITVVRCPGAVELPLVA 64
Query: 127 QQLGKSGKYTAVLCIGAVV 145
Q++ K+G Y A++ +G V+
Sbjct: 65 QRVAKTGDYDAIVSLGCVI 83
>TIGR_CMR|ECH_0783 [details] [associations]
symbol:ECH_0783 "6,7-dimethyl-8-ribityllumazine synthase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0016874 GO:GO:0016740
GO:GO:0009231 eggNOG:COG0054 KO:K00794 GO:GO:0009349 GO:GO:0000906
Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
TIGRFAMs:TIGR00114 ProtClustDB:PRK00061 HOGENOM:HOG000229250
RefSeq:YP_507581.1 ProteinModelPortal:Q2GG52 STRING:Q2GG52
GeneID:3927968 KEGG:ech:ECH_0783 PATRIC:20576994 OMA:GLCIGNG
BioCyc:ECHA205920:GJNR-786-MONOMER Uniprot:Q2GG52
Length = 149
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 73 NEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEI--GVVAQQLG 130
N+ + +VV++F V LLL GA++ KKYS K D+V+VPGSFEI +V +
Sbjct: 3 NDHINILIVVSQFYSDVADLLLNGAVDQLKKYS-KPVKYDIVYVPGSFEIPAAIVFAIMS 61
Query: 131 KSGKYTAVLCIGAVV 145
Y + +G V+
Sbjct: 62 DRHHYDGYIALGCVI 76
>POMBASE|SPBC409.13 [details] [associations]
symbol:SPBC409.13 "6,7-dimethyl-8-ribityllumazine
synthase (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0000906 "6,7-dimethyl-8-ribityllumazine synthase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0009231 "riboflavin biosynthetic
process" evidence=ISO] [GO:0009349 "riboflavin synthase complex"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
PomBase:SPBC409.13 GO:GO:0005634 GO:GO:0005737 GO:GO:0016740
EMBL:CU329671 GenomeReviews:CU329671_GR DrugBank:DB00140
GO:GO:0009231 PIR:T40440 RefSeq:NP_595463.1 PDB:1KYV PDB:1KYX
PDB:1KYY PDB:1KZ1 PDB:1KZ4 PDB:1KZ6 PDB:1KZ9 PDB:2A57 PDB:2A58
PDB:2A59 PDBsum:1KYV PDBsum:1KYX PDBsum:1KYY PDBsum:1KZ1
PDBsum:1KZ4 PDBsum:1KZ6 PDBsum:1KZ9 PDBsum:2A57 PDBsum:2A58
PDBsum:2A59 ProteinModelPortal:Q9UUB1 SMR:Q9UUB1 STRING:Q9UUB1
PRIDE:Q9UUB1 EnsemblFungi:SPBC409.13.1 GeneID:2541125
KEGG:spo:SPBC409.13 eggNOG:COG0054 HOGENOM:HOG000229253 KO:K00794
OMA:TLAMIET OrthoDB:EOG49S9GR EvolutionaryTrace:Q9UUB1
NextBio:20802238 GO:GO:0009349 GO:GO:0000906 Gene3D:3.40.50.960
PANTHER:PTHR21058 SUPFAM:SSF52121 TIGRFAMs:TIGR00114 Uniprot:Q9UUB1
Length = 159
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 72 KNEGLRFALVVARFNELVTKLLLEGALETF-KKYSVKEENIDVVWVPGSFEI--GVVAQQ 128
K LR +V AR+N + L++GA+ET +K+ VK ENID+ VPGS+E+ G+ A
Sbjct: 14 KGPELRILIVHARWNLQAIEPLVKGAVETMIEKHDVKLENIDIESVPGSWELPQGIRAS- 72
Query: 129 LGKSGKYTAVLCIGAVV 145
+ ++ Y AV+ IG ++
Sbjct: 73 IARN-TYDAVIGIGVLI 88
>TIGR_CMR|SPO_0268 [details] [associations]
symbol:SPO_0268 "riboflavin synthase, beta subunit"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004746 "riboflavin
synthase activity" evidence=ISS] [GO:0009231 "riboflavin
biosynthetic process" evidence=ISS] HAMAP:MF_00178
InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016740 GO:GO:0009231 GO:GO:0009349
GO:GO:0000906 Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
ProteinModelPortal:Q5LX59 SMR:Q5LX59 PATRIC:23373787
HOGENOM:HOG000229252 ProtClustDB:PRK12419 Uniprot:Q5LX59
Length = 245
Score = 108 (43.1 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 25/69 (36%), Positives = 40/69 (57%)
Query: 77 RFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYT 136
R+A + A ++ + LEG LE + E +DV VPG+FE+ ++A+ L ++G+Y
Sbjct: 104 RYAFIKANWHADIVDRALEGFLEL-----IPPEQVDVYDVPGAFEMPLLARDLAQTGRYA 158
Query: 137 AVLCIGAVV 145
AV C VV
Sbjct: 159 AVACAAFVV 167
>ASPGD|ASPL0000028987 [details] [associations]
symbol:riboG species:162425 "Emericella nidulans"
[GO:0009231 "riboflavin biosynthetic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IDA] [GO:0009349 "riboflavin
synthase complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005758 "mitochondrial intermembrane space" evidence=IEA]
[GO:0000906 "6,7-dimethyl-8-ribityllumazine synthase activity"
evidence=IEA] HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885
UniPathway:UPA00275 EMBL:BN001305 GO:GO:0009231
HOGENOM:HOG000229253 GO:GO:0009349 Gene3D:3.40.50.960
PANTHER:PTHR21058 SUPFAM:SSF52121 TIGRFAMs:TIGR00114 GO:GO:0004746
EnsemblFungi:CADANIAT00003256 OMA:ETMHFEY Uniprot:C8VFD4
Length = 207
Score = 103 (41.3 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 75 GLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGK 134
GLR A+V AR+N + L++GA +T + V E++I++ VPGS+E+ Q+L + +
Sbjct: 17 GLRVAIVHARWNMGIIGPLVDGATKTLRAAGVAEDHIEIHTVPGSYELPFAVQRLYSASQ 76
Query: 135 YTA 137
A
Sbjct: 77 LQA 79
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 145 145 0.00071 103 3 11 22 0.43 31
30 0.49 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 552 (59 KB)
Total size of DFA: 114 KB (2076 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.59u 0.22s 14.81t Elapsed: 00:00:01
Total cpu time: 14.59u 0.22s 14.81t Elapsed: 00:00:01
Start: Fri May 10 21:31:44 2013 End: Fri May 10 21:31:45 2013