BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032220
MAEEEPKKLETETPTEPPPPPSTEPAAPAAAEPPKDVADDKTVIPSPPAEDKPEESKALA
VVDKAPEAEPPAGEKSTEGSVNRDAVLARVETEKRISLIRAWEESEKSQAENKAHKKLSS
IVSWENSRKAAVEAELKKIEVNVNF

High Scoring Gene Products

Symbol, full name Information P value
P93788
Remorin
protein from Solanum tuberosum 1.0e-29
AT5G23750 protein from Arabidopsis thaliana 8.2e-28
AT3G48940 protein from Arabidopsis thaliana 1.4e-25
AT3G61260 protein from Arabidopsis thaliana 2.0e-24
AT2G45820 protein from Arabidopsis thaliana 2.6e-24
AT2G02170 protein from Arabidopsis thaliana 1.0e-05
AT1G30320 protein from Arabidopsis thaliana 1.8e-05
AT4G00670 protein from Arabidopsis thaliana 8.1e-05
AT1G69325 protein from Arabidopsis thaliana 0.00072
AT4G36970 protein from Arabidopsis thaliana 0.00093

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032220
        (145 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|P93788 - symbol:P93788 "Remorin" species:4113 "...   329  1.0e-29   1
TAIR|locus:2172793 - symbol:AT5G23750 "AT5G23750" species...   311  8.2e-28   1
TAIR|locus:2101303 - symbol:AT3G48940 "AT3G48940" species...   290  1.4e-25   1
TAIR|locus:2098921 - symbol:AT3G61260 species:3702 "Arabi...   279  2.0e-24   1
TAIR|locus:2050704 - symbol:AT2G45820 "AT2G45820" species...   278  2.6e-24   1
TAIR|locus:2051673 - symbol:AT2G02170 "AT2G02170" species...   112  1.0e-05   1
TAIR|locus:2204197 - symbol:AT1G30320 "AT1G30320" species...   110  1.8e-05   1
TAIR|locus:2127058 - symbol:AT4G00670 "AT4G00670" species...    94  8.1e-05   1
TAIR|locus:1005716754 - symbol:AT1G69325 "AT1G69325" spec...    85  0.00072   1
TAIR|locus:2115085 - symbol:AT4G36970 "AT4G36970" species...    93  0.00093   1


>UNIPROTKB|P93788 [details] [associations]
            symbol:P93788 "Remorin" species:4113 "Solanum tuberosum"
            [GO:0005886 "plasma membrane" evidence=IDA] [GO:0007267 "cell-cell
            signaling" evidence=NAS] [GO:0048032 "galacturonate binding"
            evidence=IDA] Pfam:PF03763 Pfam:PF03766 GO:GO:0005886 GO:GO:0006810
            GO:GO:0007267 InterPro:IPR005516 InterPro:IPR005518 EMBL:U72489
            PIR:T07780 KEGG:dosa:Os10t0503800-01 GO:GO:0048032 Uniprot:P93788
        Length = 198

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 73/110 (66%), Positives = 92/110 (83%)

Query:    37 VADDKTVI-PS--PPAEDK--PEESKALAVVD-KAPEAEPPAGEKSTEGSVNRDAVLARV 90
             VAD+K ++ P+  PPAE+K  P++SKAL VV+ KAPE   PA EK  EGS++RDAVLARV
Sbjct:    29 VADEKAIVAPALPPPAEEKEKPDDSKALVVVETKAPE---PADEKK-EGSIDRDAVLARV 84

Query:    91 ETEKRISLIRAWEESEKSQAENKAHKKLSSIVSWENSRKAAVEAELKKIE 140
              TEKR+SLI+AWEESEKS+AENKA KK+S+I +WENS+KA +EAELKK+E
Sbjct:    85 ATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWENSKKANLEAELKKME 134


>TAIR|locus:2172793 [details] [associations]
            symbol:AT5G23750 "AT5G23750" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0042546 "cell wall biogenesis" evidence=RCA]
            Pfam:PF03763 Pfam:PF03766 EMBL:CP002688 EMBL:AB005244
            InterPro:IPR005516 InterPro:IPR005518 EMBL:AF387006 EMBL:BT000016
            IPI:IPI00519664 RefSeq:NP_197764.1 UniGene:At.22829 IntAct:Q9FFA5
            PRIDE:Q9FFA5 EnsemblPlants:AT5G23750.1 GeneID:832440
            KEGG:ath:AT5G23750 TAIR:At5g23750 InParanoid:Q9FFA5 OMA:CKVENKA
            PhylomeDB:Q9FFA5 ProtClustDB:CLSN2686297 ArrayExpress:Q9FFA5
            Genevestigator:Q9FFA5 Uniprot:Q9FFA5
        Length = 202

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 70/100 (70%), Positives = 82/100 (82%)

Query:    43 VIPSP-PAEDKPEESKALA-VVDKAPEAEPPAGEKSTEGSVNRDAVLARVETEKRISLIR 100
             V+PSP PAE+K E+SKA+  VV K  E E    E+  EGSVNRDAVLARVETEKR+SLI+
Sbjct:    45 VLPSPAPAEEKQEDSKAIVPVVPK--EVE----EEKKEGSVNRDAVLARVETEKRMSLIK 98

Query:   101 AWEESEKSQAENKAHKKLSSIVSWENSRKAAVEAELKKIE 140
             AWEE+EK + ENKA KKLSSI SWEN++KAAVEAELKK+E
Sbjct:    99 AWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKME 138


>TAIR|locus:2101303 [details] [associations]
            symbol:AT3G48940 "AT3G48940" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0048765 "root hair cell differentiation"
            evidence=RCA] Pfam:PF03763 Pfam:PF03766 EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AL132967 HOGENOM:HOG000239299
            InterPro:IPR005516 InterPro:IPR005518 IPI:IPI00526150 PIR:T46136
            RefSeq:NP_190463.1 UniGene:At.53841 EnsemblPlants:AT3G48940.1
            GeneID:824055 KEGG:ath:AT3G48940 TAIR:At3g48940 eggNOG:NOG272280
            InParanoid:Q9SMT2 OMA:GAWENSK PhylomeDB:Q9SMT2
            ProtClustDB:CLSN2913484 Genevestigator:Q9SMT2 Uniprot:Q9SMT2
        Length = 175

 Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 61/101 (60%), Positives = 80/101 (79%)

Query:    45 PSPPA-EDKPEESKALAVVDKAPEAEPPAGEKSTEGSVNRDAVLARVETEKRISLIRAWE 103
             PSPP+ E+K ++SKA+ +V  A E   P  +K   GSV+RDAVL R+E +KRISLI+AWE
Sbjct:    19 PSPPSKEEKSDDSKAIVLVVAAKE---PTEDKKV-GSVHRDAVLVRLEQDKRISLIKAWE 74

Query:   104 ESEKSQAENKAHKKLSSIVSWENSRKAAVEAELKKIEVNVN 144
             E+EKS+ ENKA KK+SS+ +WENS+KA+VEAELKKIE  +N
Sbjct:    75 EAEKSKVENKAQKKISSVGAWENSKKASVEAELKKIEEQLN 115


>TAIR|locus:2098921 [details] [associations]
            symbol:AT3G61260 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] [GO:0005773 "vacuole" evidence=IDA] [GO:0009506
            "plasmodesma" evidence=IDA] Pfam:PF03763 Pfam:PF03766 GO:GO:0005886
            GO:GO:0009506 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
            EMBL:AL137898 HOGENOM:HOG000239299 ProtClustDB:CLSN2683444
            InterPro:IPR005516 InterPro:IPR005518 EMBL:AF370346 EMBL:AY062977
            EMBL:AY088061 IPI:IPI00539947 PIR:T47918 RefSeq:NP_191685.1
            UniGene:At.21524 IntAct:Q9M2D8 STRING:Q9M2D8 PaxDb:Q9M2D8
            PRIDE:Q9M2D8 EnsemblPlants:AT3G61260.1 GeneID:825298
            KEGG:ath:AT3G61260 TAIR:At3g61260 eggNOG:NOG252013
            InParanoid:Q9M2D8 OMA:IADVHAW PhylomeDB:Q9M2D8
            Genevestigator:Q9M2D8 Uniprot:Q9M2D8
        Length = 212

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 60/105 (57%), Positives = 78/105 (74%)

Query:    36 DVADDKTVIPSPPAEDKPEESKALAVVDKAPEAEPPAGEKSTEGSVNRDAVLARVETEKR 95
             DVA++K  I +PP E   ++SKAL VV+K P  E PA  K    S++RD  LA +  EKR
Sbjct:    48 DVAEEK--IQNPPPEQIFDDSKALTVVEK-P-VEEPAPAKPASASLDRDVKLADLSKEKR 103

Query:    96 ISLIRAWEESEKSQAENKAHKKLSSIVSWENSRKAAVEAELKKIE 140
             +S +RAWEESEKS+AENKA KK++ + +WENS+KAAVEA+LKKIE
Sbjct:   104 LSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIE 148


>TAIR|locus:2050704 [details] [associations]
            symbol:AT2G45820 "AT2G45820" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005886
            "plasma membrane" evidence=ISM;IDA] [GO:0008150
            "biological_process" evidence=ND] [GO:0005515 "protein binding"
            evidence=IPI] Pfam:PF03763 Pfam:PF03766 GO:GO:0005886 EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC004665 EMBL:M25268 EMBL:AY045996
            EMBL:AY079329 IPI:IPI00539171 PIR:T02465 RefSeq:NP_182106.1
            UniGene:At.24530 IntAct:O80837 STRING:O80837 PaxDb:O80837
            PRIDE:O80837 ProMEX:O80837 EnsemblPlants:AT2G45820.1 GeneID:819190
            KEGG:ath:AT2G45820 TAIR:At2g45820 eggNOG:NOG288404
            HOGENOM:HOG000239299 InParanoid:O80837 OMA:AILSWEN PhylomeDB:O80837
            ProtClustDB:CLSN2683444 Genevestigator:O80837 InterPro:IPR005516
            InterPro:IPR005518 Uniprot:O80837
        Length = 190

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 60/105 (57%), Positives = 80/105 (76%)

Query:    36 DVADDKTVIPSPPAEDKPEESKALAVVDKAPEAEPPAGEKSTEGSVNRDAVLARVETEKR 95
             +VAD+K  I +PP    P ESKALAVV+K  E   P  +K++ GS +RD +LA +E EK+
Sbjct:    30 EVADEK--IHNPP----PVESKALAVVEKPIEEHTP--KKASSGSADRDVILADLEKEKK 81

Query:    96 ISLIRAWEESEKSQAENKAHKKLSSIVSWENSRKAAVEAELKKIE 140
              S I+AWEESEKS+AEN+A KK+S + +WENS+KAAVEA+L+KIE
Sbjct:    82 TSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLRKIE 126


>TAIR|locus:2051673 [details] [associations]
            symbol:AT2G02170 "AT2G02170" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005886
            "plasma membrane" evidence=ISM;IDA] [GO:0008150
            "biological_process" evidence=ND] Pfam:PF03763 GO:GO:0005886
            EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC005936
            InterPro:IPR005516 HOGENOM:HOG000238733 EMBL:AF385733 EMBL:BT003022
            IPI:IPI00526082 PIR:G84433 RefSeq:NP_001077869.1 RefSeq:NP_027421.1
            UniGene:At.13362 PRIDE:Q9ZUM1 EnsemblPlants:AT2G02170.1
            EnsemblPlants:AT2G02170.2 GeneID:814748 KEGG:ath:AT2G02170
            TAIR:At2g02170 eggNOG:NOG267380 InParanoid:Q9ZUM1 OMA:MKTRREI
            PhylomeDB:Q9ZUM1 ProtClustDB:CLSN2687932 ArrayExpress:Q9ZUM1
            Genevestigator:Q9ZUM1 Uniprot:Q9ZUM1
        Length = 486

 Score = 112 (44.5 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 25/58 (43%), Positives = 37/58 (63%)

Query:    88 ARVETEKRISLIRA--WEESEKSQAENKAHKKLSSIVSWENSRKAAVEAELKKIEVNV 143
             A ++T K +S  RA  WEE+EK++   +  ++   I +WEN +KA  EAE+KK EV V
Sbjct:   364 ASLQTSKSVSEARATAWEEAEKAKHMARFRREEMKIQAWENHQKAKSEAEMKKTEVKV 421


>TAIR|locus:2204197 [details] [associations]
            symbol:AT1G30320 "AT1G30320" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
            evidence=IDA] Pfam:PF03763 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0005886 EMBL:AC025295 InterPro:IPR005516 EMBL:BT006124
            EMBL:AK118811 IPI:IPI00542493 PIR:E86427 RefSeq:NP_174322.1
            UniGene:At.40574 PRIDE:Q9C8G3 EnsemblPlants:AT1G30320.1
            GeneID:839912 KEGG:ath:AT1G30320 TAIR:At1g30320 eggNOG:NOG317405
            HOGENOM:HOG000238733 InParanoid:Q9C8G3 OMA:DAEKWIM PhylomeDB:Q9C8G3
            ProtClustDB:CLSN2682078 Genevestigator:Q9C8G3 Uniprot:Q9C8G3
        Length = 509

 Score = 110 (43.8 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 28/74 (37%), Positives = 44/74 (59%)

Query:    72 AGEKSTEGSVNR-DAVLA-RVETEKRISLIRAWEESEKSQAENKAHKKLSSIVSWENSRK 129
             A ++  E   N  DA  A ++E EKR +   AWEE+EKS+   +  ++   I +WE+  K
Sbjct:   373 ASKEEEENKKNNGDAEEAQKIEFEKRAT---AWEEAEKSKHNARYKREEIRIQAWESQEK 429

Query:   130 AAVEAELKKIEVNV 143
             A +EAE+++IE  V
Sbjct:   430 AKLEAEMRRIEAKV 443


>TAIR|locus:2127058 [details] [associations]
            symbol:AT4G00670 "AT4G00670" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005886
            "plasma membrane" evidence=ISM] Pfam:PF03763 EMBL:CP002687
            GenomeReviews:CT486007_GR InterPro:IPR005516 UniGene:At.25593
            EMBL:BT014759 EMBL:BT015948 IPI:IPI00526954 RefSeq:NP_191976.2
            UniGene:At.48814 PaxDb:Q6IDB4 PRIDE:Q6IDB4
            EnsemblPlants:AT4G00670.1 GeneID:828034 KEGG:ath:AT4G00670
            TAIR:At4g00670 OMA:KISHEAK PhylomeDB:Q6IDB4 Genevestigator:Q6IDB4
            Uniprot:Q6IDB4
        Length = 123

 Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 16/48 (33%), Positives = 30/48 (62%)

Query:    93 EKRISLIRAWEESEKSQAENKAHKKLSSIVSWENSRKAAVEAELKKIE 140
             +++  +I+AW+E + ++  NK  KKL  I  WE  +   +E+EL +I+
Sbjct:    11 DEQSKVIKAWKELKITKVNNKTQKKLLDISGWEKKKTTKIESELARIQ 58


>TAIR|locus:1005716754 [details] [associations]
            symbol:AT1G69325 "AT1G69325" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF03763 EMBL:CP002684 InterPro:IPR005516
            IPI:IPI00543104 RefSeq:NP_849866.1 UniGene:At.52446
            EnsemblPlants:AT1G69325.1 GeneID:843264 KEGG:ath:AT1G69325
            Uniprot:F4I0M0
        Length = 120

 Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
 Identities = 16/60 (26%), Positives = 34/60 (56%)

Query:    84 DAVLARVETEKRISLIRAWEESEKSQAENKAHKKLSSIVSWENSRKAAVEAELKKIEVNV 143
             ++ + R + E   +++  W+E+E S++  K  K    IVSWE+ ++   + +L + E +V
Sbjct:     3 ESTVQRAKPEHMAAVVDQWKETEISKSRKKYEKLSEKIVSWEDKKRKKAKRKLHRTERSV 62


>TAIR|locus:2115085 [details] [associations]
            symbol:AT4G36970 "AT4G36970" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005886
            "plasma membrane" evidence=ISM;IDA] [GO:0009507 "chloroplast"
            evidence=IDA] Pfam:PF03763 GO:GO:0005886 GO:GO:0009507
            EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:Z99707 EMBL:AL161590
            InterPro:IPR005516 EMBL:AY150393 IPI:IPI00530871 PIR:F85436
            RefSeq:NP_568012.1 UniGene:At.4642 UniGene:At.4643 IntAct:O23188
            PRIDE:O23188 EnsemblPlants:AT4G36970.1 GeneID:829851
            KEGG:ath:AT4G36970 TAIR:At4g36970 eggNOG:NOG272009
            HOGENOM:HOG000005670 InParanoid:O23188 OMA:SSSWDIS PhylomeDB:O23188
            ProtClustDB:CLSN2714874 Genevestigator:O23188 Uniprot:O23188
        Length = 427

 Score = 93 (37.8 bits), Expect = 0.00093, P = 0.00093
 Identities = 28/103 (27%), Positives = 49/103 (47%)

Query:    42 TVIPSPPAEDKPEESKALAVVDK-APEAEPPAGEKSTEGSVNRDAVLARVETEKRISLIR 100
             +VI  PP   +  E K    +DK A   + P     +   + R+       +E   S   
Sbjct:   250 SVIEPPPCRGEVREVK----MDKGARMIKRPKRRVMSSRIIRREQPEVEDNSEASASS-S 304

Query:   101 AWEESEKSQAENKAHKKLSSIVSWENSRKAAVEAELKKIEVNV 143
             +W+ SE +   +K  ++ + I +WEN +KA  EA ++K+EV +
Sbjct:   305 SWDISEPAMTLSKLQREEAKIAAWENLQKAKAEAAIRKLEVKL 347


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.301   0.119   0.315    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      145       111   0.00091  102 3  11 23  0.46    31
                                                     29  0.42    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  499 (53 KB)
  Total size of DFA:  105 KB (2074 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.87u 0.09s 19.96t   Elapsed:  00:00:02
  Total cpu time:  19.87u 0.09s 19.96t   Elapsed:  00:00:02
  Start:  Mon May 20 17:35:26 2013   End:  Mon May 20 17:35:28 2013

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