Your job contains 1 sequence.
>032225
MRVTLRILPQVKKGVCGNGSGITGTNRDLRIREDIPKYLLNLDENSAYYDPKIRSMREDL
NPDDNPNEKFYAGYNRYRMGGQALEWKQVNIHAWKASGRGQDIHPEAALTQAELHYRWEK
DIEEKKRLCKKEKIMEKYGNAASED
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 032225
(145 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2018496 - symbol:SMP1 "SWELLMAP 1" species:370... 409 3.4e-38 1
TAIR|locus:2115115 - symbol:SMP2 "SWELLMAP 2" species:370... 397 6.3e-37 1
TAIR|locus:2077157 - symbol:AT3G45950 species:3702 "Arabi... 346 1.6e-31 1
UNIPROTKB|O95391 - symbol:SLU7 "Pre-mRNA-splicing factor ... 259 3.3e-23 2
MGI|MGI:2385598 - symbol:Slu7 "SLU7 splicing factor homol... 259 6.8e-23 2
UNIPROTKB|Q3ZBE5 - symbol:SLU7 "Pre-mRNA-splicing factor ... 259 6.9e-23 2
UNIPROTKB|F1RR54 - symbol:SLU7 "Uncharacterized protein" ... 259 6.9e-23 2
RGD|631432 - symbol:Slu7 "SLU7 splicing factor homolog (S... 259 6.9e-23 2
UNIPROTKB|E2RRD5 - symbol:SLU7 "Uncharacterized protein" ... 259 9.8e-23 2
ZFIN|ZDB-GENE-041114-62 - symbol:slu7 "SLU7 splicing fact... 255 3.1e-22 2
UNIPROTKB|F1NNB9 - symbol:SLU7 "Pre-mRNA-splicing factor ... 260 1.3e-21 1
UNIPROTKB|Q5ZIG2 - symbol:SLU7 "Pre-mRNA-splicing factor ... 260 1.3e-21 1
UNIPROTKB|F1NRP0 - symbol:SLU7 "Pre-mRNA-splicing factor ... 260 1.4e-21 1
FB|FBgn0039626 - symbol:Slu7 "Slu7" species:7227 "Drosoph... 238 3.3e-19 1
GENEDB_PFALCIPARUM|PFF0500c - symbol:PFF0500c "step II sp... 233 5.8e-19 1
UNIPROTKB|C6KSU8 - symbol:PFF0500c "Step II splicing fact... 233 5.8e-19 1
DICTYBASE|DDB_G0281901 - symbol:slu7 "putative RNA splici... 229 3.0e-18 1
ASPGD|ASPL0000074217 - symbol:AN4788 species:162425 "Emer... 197 5.8e-15 1
UNIPROTKB|Q51LA6 - symbol:SLU7 "Pre-mRNA-splicing factor ... 183 2.0e-13 1
WB|WBGene00010629 - symbol:K07C5.6 species:6239 "Caenorha... 180 7.5e-13 1
POMBASE|SPBC365.05c - symbol:slu7 "splicing factor Slu7" ... 145 1.7e-09 1
>TAIR|locus:2018496 [details] [associations]
symbol:SMP1 "SWELLMAP 1" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=RCA;IMP] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0030422 "production of siRNA involved
in RNA interference" evidence=RCA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0048522 "positive regulation of cellular process"
evidence=RCA] [GO:0051276 "chromosome organization" evidence=RCA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0008380 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0003727 GO:GO:0006397 GO:GO:0005681
EMBL:AC001229 EMBL:AC007234 EMBL:BT002797 IPI:IPI00532994
PIR:E96681 RefSeq:NP_564859.2 UniGene:At.35860 PaxDb:Q9SHY8
PRIDE:Q9SHY8 EnsemblPlants:AT1G65660.1 GeneID:842877
KEGG:ath:AT1G65660 TAIR:At1g65660 eggNOG:NOG251791
HOGENOM:HOG000194391 InParanoid:Q9SHY8 KO:K12819 OMA:PQTLMEM
PhylomeDB:Q9SHY8 ProtClustDB:CLSN2684786 Genevestigator:Q9SHY8
InterPro:IPR021715 Pfam:PF11708 Uniprot:Q9SHY8
Length = 535
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 82/136 (60%), Positives = 104/136 (76%)
Query: 10 QVKKGVCGNGSGITGTNRDLRIREDIPKYLLNLDENSAYYDPKIRSMREDLNPDDNPNEK 69
+V+K V G G TGT R+LRIRED KYLLNLD NSA+YDPK RSMRED PD +PN+K
Sbjct: 219 KVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNDK 278
Query: 70 FYAGYNRYRMGGQALEWKQVNIHAWKASGRGQDIHPEAALTQAELHYRWEKDIEEKKRLC 129
FY G N+YR GQALE+KQ+NIH+W+A +GQD+H +AA +QAEL Y+ + +EK +
Sbjct: 279 FYLGDNQYRNSGQALEFKQLNIHSWEAFDKGQDMHMQAAPSQAELLYKSFQVAKEKLKSQ 338
Query: 130 KKEKIMEKYGNAASED 145
K+ IM+KYGNAA+ED
Sbjct: 339 TKDTIMDKYGNAATED 354
>TAIR|locus:2115115 [details] [associations]
symbol:SMP2 "SWELLMAP 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IGI;RCA] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0051276 "chromosome organization"
evidence=RCA] InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008380 GO:GO:0046872
GO:GO:0008284 GO:GO:0008270 GO:GO:0003727 GO:GO:0006397
GO:GO:0005681 EMBL:Z99707 EMBL:AL161590 eggNOG:NOG251791
HOGENOM:HOG000194391 KO:K12819 ProtClustDB:CLSN2684786
InterPro:IPR021715 Pfam:PF11708 EMBL:AY056418 IPI:IPI00533640
PIR:E85438 RefSeq:NP_568017.1 UniGene:At.4652 PaxDb:O23174
PRIDE:O23174 EnsemblPlants:AT4G37120.1 GeneID:829866
KEGG:ath:AT4G37120 TAIR:At4g37120 InParanoid:O23174 OMA:DSAKYDP
PhylomeDB:O23174 Genevestigator:O23174 Uniprot:O23174
Length = 536
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 82/135 (60%), Positives = 101/135 (74%)
Query: 10 QVKKGVCGNGSGITGTNRDLRIREDIPKYLLNLDENSAYYDPKIRSMREDLNPDDNPNEK 69
+V+K V G G TGT R+LRIRED KYLLNLD NSA+YDPK RSMRED PD +PNEK
Sbjct: 219 KVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNEK 278
Query: 70 FYAGYNRYRMGGQALEWKQVNIHAWKASGRGQDIHPEAALTQAELHYRWEKDIEEKKRLC 129
FY G N+YR GQALE+KQ+NIH+ +A +G D+H +AA +QAEL Y+ K +EK +
Sbjct: 279 FYLGDNQYRNSGQALEFKQINIHSCEAFDKGHDMHMQAAPSQAELLYKNFKVAKEKLKTQ 338
Query: 130 KKEKIMEKYGNAASE 144
K+ IMEKYGNAA+E
Sbjct: 339 TKDTIMEKYGNAATE 353
>TAIR|locus:2077157 [details] [associations]
symbol:AT3G45950 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 SMART:SM00343 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0008270 GO:GO:0003676 EMBL:AL162459
HOGENOM:HOG000194391 KO:K12819 ProtClustDB:CLSN2684786
InterPro:IPR021715 Pfam:PF11708 IPI:IPI00542568 PIR:T47535
RefSeq:NP_190181.1 UniGene:At.65253 PaxDb:Q9LZT6 PRIDE:Q9LZT6
EnsemblPlants:AT3G45950.1 GeneID:823738 KEGG:ath:AT3G45950
TAIR:At3g45950 eggNOG:NOG305850 InParanoid:Q9LZT6 OMA:DDIPMEL
PhylomeDB:Q9LZT6 Genevestigator:Q9LZT6 Uniprot:Q9LZT6
Length = 385
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 75/136 (55%), Positives = 96/136 (70%)
Query: 10 QVKKGVCGNGSGITGTNRDLRIREDIPKYLLNLDENSAYYDPKIRSMREDLNPDDNPNEK 69
+VKK V G GT R+LRIRED KYLLNLD NSAYYDPK RSMRED P +PNEK
Sbjct: 209 KVKKRVRTTDGGSKGTVRNLRIREDPAKYLLNLDVNSAYYDPKSRSMREDPLPYTDPNEK 268
Query: 70 FYAGYNRYRMGGQALEWKQVNIHAWKASGRGQDIHPEAALTQAELHYRWEKDIEEKKRLC 129
F N+YR GQA+E+KQ N+++ +A +GQDIH +AA +QAEL Y+ K +EK
Sbjct: 269 FCLRDNQYRNSGQAIEFKQQNMYSCEAFDKGQDIHMQAAPSQAELCYKRVKIAKEKLNSQ 328
Query: 130 KKEKIMEKYGNAASED 145
+K+ I+ KYG+AA++D
Sbjct: 329 RKDAIIAKYGDAAAKD 344
>UNIPROTKB|O95391 [details] [associations]
symbol:SLU7 "Pre-mRNA-splicing factor SLU7" species:9606
"Homo sapiens" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006886 "intracellular protein
transport" evidence=IDA] [GO:0033554 "cellular response to stress"
evidence=IDA] [GO:0000380 "alternative mRNA splicing, via
spliceosome" evidence=IDA] [GO:0000389 "mRNA 3'-splice site
recognition" evidence=IDA] [GO:0016607 "nuclear speck"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0030532 "small nuclear ribonucleoprotein complex" evidence=IDA]
[GO:0030628 "pre-mRNA 3'-splice site binding" evidence=IDA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 GO:GO:0005737
GO:GO:0006886 EMBL:CH471062 GO:GO:0033554 GO:GO:0046872
GO:GO:0016607 GO:GO:0008270 GO:GO:0071013 GO:GO:0030532
EMBL:AC091842 GO:GO:0000380 GO:GO:0000389 eggNOG:NOG251791
HOGENOM:HOG000194391 KO:K12819 OMA:PQTLMEM InterPro:IPR021715
Pfam:PF11708 CTD:10569 HOVERGEN:HBG053287 OrthoDB:EOG42RD76
GO:GO:0030628 GO:GO:0000386 EMBL:AF101074 EMBL:BC010634
EMBL:AY486334 EMBL:DQ174516 EMBL:DQ174517 IPI:IPI00294435
RefSeq:NP_006416.3 UniGene:Hs.435342 IntAct:O95391
MINT:MINT-1467161 STRING:O95391 PhosphoSite:O95391 PaxDb:O95391
PRIDE:O95391 DNASU:10569 Ensembl:ENST00000297151
Ensembl:ENST00000520664 GeneID:10569 KEGG:hsa:10569 UCSC:uc003lyg.3
GeneCards:GC05M159762 HGNC:HGNC:16939 HPA:HPA035907 MIM:605974
neXtProt:NX_O95391 PharmGKB:PA128394574 InParanoid:O95391
PhylomeDB:O95391 ChiTaRS:SLU7 GenomeRNAi:10569 NextBio:40113
PMAP-CutDB:O95391 ArrayExpress:O95391 Bgee:O95391 CleanEx:HS_SLU7
Genevestigator:O95391 Uniprot:O95391
Length = 586
Score = 259 (96.2 bits), Expect = 3.3e-23, Sum P(2) = 3.3e-23
Identities = 57/117 (48%), Positives = 74/117 (63%)
Query: 25 TNRDLRIREDIPKYLLNLDENSAYYDPKIRSMRED--LNPDDNPNEKFYAGYNRYRMGGQ 82
T R+LRIREDI KYL NLD NSAYYDPK R+MRE+ N NP+E YAG N R G
Sbjct: 261 TVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANAGKNPDEVSYAGDNFVRYTGD 320
Query: 83 ALEWKQVNIHAWKASGRGQDIHPEAALTQAELHYRWEKDIEEKKRLCKKEKIMEKYG 139
+ Q + AW+A +G ++H +A T+ EL Y+ K +E + +KE I+EKYG
Sbjct: 321 TISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKSFKVKKEDFKEQQKESILEKYG 377
Score = 39 (18.8 bits), Expect = 3.3e-23, Sum P(2) = 3.3e-23
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 7 ILPQVKKGVCGNGSGITGTNRD 28
I+ + +KG C N +T +D
Sbjct: 111 IITKYRKGACENCGAMTHKKKD 132
>MGI|MGI:2385598 [details] [associations]
symbol:Slu7 "SLU7 splicing factor homolog (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISO] [GO:0000380
"alternative mRNA splicing, via spliceosome" evidence=ISO]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=ISO] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=ISO] [GO:0008270 "zinc
ion binding" evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=ISO] [GO:0030628
"pre-mRNA 3'-splice site binding" evidence=ISO] [GO:0033554
"cellular response to stress" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
MGI:MGI:2385598 GO:GO:0005737 GO:GO:0006886 GO:GO:0033554
GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 GO:GO:0005681
GO:GO:0071013 GO:GO:0030532 EMBL:AL670472 GO:GO:0000380
GO:GO:0000389 eggNOG:NOG251791 KO:K12819 OMA:PQTLMEM
InterPro:IPR021715 Pfam:PF11708 CTD:10569
GeneTree:ENSGT00390000002292 HOVERGEN:HBG053287 OrthoDB:EOG42RD76
GO:GO:0030628 GO:GO:0000386 ChiTaRS:SLU7 EMBL:AK029117
EMBL:AK046262 EMBL:AK047597 EMBL:AK049178 EMBL:BC013810
EMBL:BC023057 EMBL:BC060954 EMBL:BC082780 EMBL:BC106099
IPI:IPI00221882 RefSeq:NP_683514.2 RefSeq:NP_945174.1
UniGene:Mm.28200 ProteinModelPortal:Q8BHJ9 STRING:Q8BHJ9
PhosphoSite:Q8BHJ9 PaxDb:Q8BHJ9 PRIDE:Q8BHJ9 DNASU:193116
Ensembl:ENSMUST00000020681 Ensembl:ENSMUST00000151880
Ensembl:ENSMUST00000178622 GeneID:193116 KEGG:mmu:193116
UCSC:uc007imp.1 InParanoid:Q8BHJ9 NextBio:371430 Bgee:Q8BHJ9
CleanEx:MM_SLU7 Genevestigator:Q8BHJ9 Uniprot:Q8BHJ9
Length = 585
Score = 259 (96.2 bits), Expect = 6.8e-23, Sum P(2) = 6.8e-23
Identities = 57/117 (48%), Positives = 74/117 (63%)
Query: 25 TNRDLRIREDIPKYLLNLDENSAYYDPKIRSMRED--LNPDDNPNEKFYAGYNRYRMGGQ 82
T R+LRIREDI KYL NLD NSAYYDPK R+MRE+ N NP+E YAG N R G
Sbjct: 261 TVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANAGKNPDEVSYAGDNFVRYTGD 320
Query: 83 ALEWKQVNIHAWKASGRGQDIHPEAALTQAELHYRWEKDIEEKKRLCKKEKIMEKYG 139
+ Q + AW+A +G ++H +A T+ EL Y+ K +E + +KE I+EKYG
Sbjct: 321 TISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKSFKVKKEDFKEQQKESILEKYG 377
Score = 36 (17.7 bits), Expect = 6.8e-23, Sum P(2) = 6.8e-23
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 7 ILPQVKKGVCGNGSGITGTNRD 28
I + +KG C N +T +D
Sbjct: 111 ITTKYRKGACENCGAMTHKRKD 132
>UNIPROTKB|Q3ZBE5 [details] [associations]
symbol:SLU7 "Pre-mRNA-splicing factor SLU7" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0033554 "cellular
response to stress" evidence=IEA] [GO:0030628 "pre-mRNA 3'-splice
site binding" evidence=IEA] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0000380 "alternative mRNA splicing, via
spliceosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
GO:GO:0005737 GO:GO:0006886 GO:GO:0033554 GO:GO:0046872
GO:GO:0016607 GO:GO:0008270 GO:GO:0071013 GO:GO:0030532
GO:GO:0000380 GO:GO:0000389 eggNOG:NOG251791 HOGENOM:HOG000194391
KO:K12819 OMA:PQTLMEM InterPro:IPR021715 Pfam:PF11708 EMBL:BC103394
IPI:IPI00709999 RefSeq:NP_001160089.1 UniGene:Bt.105667
STRING:Q3ZBE5 PRIDE:Q3ZBE5 Ensembl:ENSBTAT00000011131 GeneID:512318
KEGG:bta:512318 CTD:10569 GeneTree:ENSGT00390000002292
HOVERGEN:HBG053287 InParanoid:Q3ZBE5 OrthoDB:EOG42RD76
NextBio:20870335 GO:GO:0030628 GO:GO:0000386 Uniprot:Q3ZBE5
Length = 586
Score = 259 (96.2 bits), Expect = 6.9e-23, Sum P(2) = 6.9e-23
Identities = 57/117 (48%), Positives = 74/117 (63%)
Query: 25 TNRDLRIREDIPKYLLNLDENSAYYDPKIRSMRED--LNPDDNPNEKFYAGYNRYRMGGQ 82
T R+LRIREDI KYL NLD NSAYYDPK R+MRE+ N NP+E YAG N R G
Sbjct: 261 TVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANAGKNPDEVSYAGDNFVRYTGD 320
Query: 83 ALEWKQVNIHAWKASGRGQDIHPEAALTQAELHYRWEKDIEEKKRLCKKEKIMEKYG 139
+ Q + AW+A +G ++H +A T+ EL Y+ K +E + +KE I+EKYG
Sbjct: 321 TISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKSFKVKKEDFKEQQKESILEKYG 377
Score = 36 (17.7 bits), Expect = 6.9e-23, Sum P(2) = 6.9e-23
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 7 ILPQVKKGVCGNGSGITGTNRD 28
I + +KG C N +T +D
Sbjct: 111 ITTKYRKGACENCGAMTHKKKD 132
>UNIPROTKB|F1RR54 [details] [associations]
symbol:SLU7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0033554 "cellular response to stress" evidence=IEA] [GO:0030628
"pre-mRNA 3'-splice site binding" evidence=IEA] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000389 "mRNA 3'-splice site recognition" evidence=IEA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IEA] [GO:0000380 "alternative mRNA splicing, via
spliceosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001878 SMART:SM00343 GO:GO:0005737
GO:GO:0006886 GO:GO:0033554 GO:GO:0016607 GO:GO:0008270
GO:GO:0071013 GO:GO:0030532 GO:GO:0000380 GO:GO:0000389 KO:K12819
OMA:PQTLMEM InterPro:IPR021715 Pfam:PF11708
GeneTree:ENSGT00390000002292 GO:GO:0030628 GO:GO:0000386
EMBL:CU571129 EMBL:CU928350 RefSeq:XP_003134141.1 UniGene:Ssc.83723
Ensembl:ENSSSCT00000018545 GeneID:100517791 KEGG:ssc:100517791
Uniprot:F1RR54
Length = 586
Score = 259 (96.2 bits), Expect = 6.9e-23, Sum P(2) = 6.9e-23
Identities = 57/117 (48%), Positives = 74/117 (63%)
Query: 25 TNRDLRIREDIPKYLLNLDENSAYYDPKIRSMRED--LNPDDNPNEKFYAGYNRYRMGGQ 82
T R+LRIREDI KYL NLD NSAYYDPK R+MRE+ N NP+E YAG N R G
Sbjct: 261 TVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANAGKNPDEVSYAGDNFVRYTGD 320
Query: 83 ALEWKQVNIHAWKASGRGQDIHPEAALTQAELHYRWEKDIEEKKRLCKKEKIMEKYG 139
+ Q + AW+A +G ++H +A T+ EL Y+ K +E + +KE I+EKYG
Sbjct: 321 TISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKSFKVKKEDFKEQQKESILEKYG 377
Score = 36 (17.7 bits), Expect = 6.9e-23, Sum P(2) = 6.9e-23
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 7 ILPQVKKGVCGNGSGITGTNRD 28
I + +KG C N +T +D
Sbjct: 111 ITTKYRKGACENCGAMTHKKKD 132
>RGD|631432 [details] [associations]
symbol:Slu7 "SLU7 splicing factor homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0000380
"alternative mRNA splicing, via spliceosome" evidence=ISS]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=ISS] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=ISS] [GO:0030532
"small nuclear ribonucleoprotein complex" evidence=ISS] [GO:0030628
"pre-mRNA 3'-splice site binding" evidence=ISS] [GO:0033554
"cellular response to stress" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] InterPro:IPR001878
PROSITE:PS50158 SMART:SM00343 RGD:631432 GO:GO:0005737
GO:GO:0006886 GO:GO:0033554 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0005681 GO:GO:0071013 GO:GO:0030532
GO:GO:0000380 GO:GO:0000389 UniGene:Rn.137183 eggNOG:NOG251791
HOGENOM:HOG000194391 KO:K12819 OMA:PQTLMEM InterPro:IPR021715
Pfam:PF11708 CTD:10569 GeneTree:ENSGT00390000002292
HOVERGEN:HBG053287 OrthoDB:EOG42RD76 GO:GO:0030628 GO:GO:0000386
EMBL:AY207315 EMBL:AABR03074285 EMBL:AABR03076495 EMBL:BC062243
IPI:IPI00197160 RefSeq:NP_001094020.1 STRING:Q80ZG5
PhosphoSite:Q80ZG5 PRIDE:Q80ZG5 Ensembl:ENSRNOT00000005132
GeneID:303057 KEGG:rno:303057 UCSC:RGD:631432 InParanoid:Q80ZG5
NextBio:650615 ArrayExpress:Q80ZG5 Genevestigator:Q80ZG5
Uniprot:Q80ZG5
Length = 586
Score = 259 (96.2 bits), Expect = 6.9e-23, Sum P(2) = 6.9e-23
Identities = 57/117 (48%), Positives = 74/117 (63%)
Query: 25 TNRDLRIREDIPKYLLNLDENSAYYDPKIRSMRED--LNPDDNPNEKFYAGYNRYRMGGQ 82
T R+LRIREDI KYL NLD NSAYYDPK R+MRE+ N NP+E YAG N R G
Sbjct: 261 TVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANAGKNPDEVSYAGDNFVRYTGD 320
Query: 83 ALEWKQVNIHAWKASGRGQDIHPEAALTQAELHYRWEKDIEEKKRLCKKEKIMEKYG 139
+ Q + AW+A +G ++H +A T+ EL Y+ K +E + +KE I+EKYG
Sbjct: 321 TISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKSFKVKKEDFKEQQKESILEKYG 377
Score = 36 (17.7 bits), Expect = 6.9e-23, Sum P(2) = 6.9e-23
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 7 ILPQVKKGVCGNGSGITGTNRD 28
I + +KG C N +T +D
Sbjct: 111 ITTKYRKGACENCGAMTHKRKD 132
>UNIPROTKB|E2RRD5 [details] [associations]
symbol:SLU7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IEA] [GO:0030628 "pre-mRNA 3'-splice site binding"
evidence=IEA] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000389 "mRNA 3'-splice site
recognition" evidence=IEA] [GO:0000386 "second spliceosomal
transesterification activity" evidence=IEA] [GO:0000380
"alternative mRNA splicing, via spliceosome" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001878
SMART:SM00343 GO:GO:0005737 GO:GO:0006886 GO:GO:0033554
GO:GO:0016607 GO:GO:0008270 GO:GO:0071013 GO:GO:0030532
GO:GO:0000380 GO:GO:0000389 KO:K12819 OMA:PQTLMEM
InterPro:IPR021715 Pfam:PF11708 CTD:10569
GeneTree:ENSGT00390000002292 GO:GO:0030628 GO:GO:0000386
EMBL:AAEX03003047 RefSeq:XP_536446.2 Ensembl:ENSCAFT00000027355
GeneID:479308 KEGG:cfa:479308 Uniprot:E2RRD5
Length = 633
Score = 259 (96.2 bits), Expect = 9.8e-23, Sum P(2) = 9.8e-23
Identities = 57/117 (48%), Positives = 74/117 (63%)
Query: 25 TNRDLRIREDIPKYLLNLDENSAYYDPKIRSMRED--LNPDDNPNEKFYAGYNRYRMGGQ 82
T R+LRIREDI KYL NLD NSAYYDPK R+MRE+ N NP+E YAG N R G
Sbjct: 308 TVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANAGKNPDEVSYAGDNFVRYTGD 367
Query: 83 ALEWKQVNIHAWKASGRGQDIHPEAALTQAELHYRWEKDIEEKKRLCKKEKIMEKYG 139
+ Q + AW+A +G ++H +A T+ EL Y+ K +E + +KE I+EKYG
Sbjct: 368 TISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKSFKVKKEDFKEQQKESILEKYG 424
Score = 36 (17.7 bits), Expect = 9.8e-23, Sum P(2) = 9.8e-23
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 7 ILPQVKKGVCGNGSGITGTNRD 28
I + +KG C N +T +D
Sbjct: 158 ITTKYRKGACENCGAMTHKKKD 179
>ZFIN|ZDB-GENE-041114-62 [details] [associations]
symbol:slu7 "SLU7 splicing factor homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR001878 SMART:SM00343
ZFIN:ZDB-GENE-041114-62 GO:GO:0008270 GO:GO:0003676
InterPro:IPR021715 Pfam:PF11708 GeneTree:ENSGT00390000002292
EMBL:AL929007 IPI:IPI00486196 Ensembl:ENSDART00000145241
ArrayExpress:F1RCR0 Bgee:F1RCR0 Uniprot:F1RCR0
Length = 619
Score = 255 (94.8 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 60/126 (47%), Positives = 78/126 (61%)
Query: 25 TNRDLRIREDIPKYLLNLDENSAYYDPKIRSMRED--LNPDDNPNEKFYAGYNRYRMGGQ 82
T R+LRIREDI KYL NLD NSAYYDPK R+MRE+ N NP E YAG N R G
Sbjct: 294 TVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYSNTGKNPEEVGYAGDNFVRYSGD 353
Query: 83 ALEWKQVNIHAWKASGRGQDIHPEAALTQAEL-H--YRWEKDIEEKKRLCKKEKIMEKYG 139
+ Q + AW+A +G ++H +A T+ EL H Y+ +KD ++K+ KE I+EKYG
Sbjct: 354 TISMAQTQLFAWEAYEKGSEVHLQADPTKLELLHQSYKVKKDDFKEKQ---KETILEKYG 410
Query: 140 NAASED 145
+ D
Sbjct: 411 GSEHLD 416
Score = 35 (17.4 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 12 KKGVCGNGSGITGTNRD 28
+KG C N +T +D
Sbjct: 157 RKGACENCGALTHKKKD 173
>UNIPROTKB|F1NNB9 [details] [associations]
symbol:SLU7 "Pre-mRNA-splicing factor SLU7" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001878
SMART:SM00343 GO:GO:0008270 GO:GO:0003676 InterPro:IPR021715
Pfam:PF11708 GeneTree:ENSGT00390000002292 IPI:IPI00600893
EMBL:AADN02035864 Ensembl:ENSGALT00000041066 ArrayExpress:F1NNB9
Uniprot:F1NNB9
Length = 564
Score = 260 (96.6 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 57/117 (48%), Positives = 74/117 (63%)
Query: 25 TNRDLRIREDIPKYLLNLDENSAYYDPKIRSMRED--LNPDDNPNEKFYAGYNRYRMGGQ 82
T R+LRIREDI KYL NLD NSAYYDPK R+MRE+ N NP+E YAG N R G
Sbjct: 242 TVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANTGKNPDEVGYAGDNFVRYTGD 301
Query: 83 ALEWKQVNIHAWKASGRGQDIHPEAALTQAELHYRWEKDIEEKKRLCKKEKIMEKYG 139
+ Q + AW+A +G ++H +A T+ EL Y+ K +E + +KE I+EKYG
Sbjct: 302 TISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKSFKVKKEDFKAQQKESILEKYG 358
>UNIPROTKB|Q5ZIG2 [details] [associations]
symbol:SLU7 "Pre-mRNA-splicing factor SLU7" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 GO:GO:0008380
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 eggNOG:NOG251791 HOGENOM:HOG000194391 KO:K12819
InterPro:IPR021715 Pfam:PF11708 CTD:10569 HOVERGEN:HBG053287
OrthoDB:EOG42RD76 EMBL:AJ720822 IPI:IPI00600893
RefSeq:NP_001006146.1 UniGene:Gga.20067 STRING:Q5ZIG2 PRIDE:Q5ZIG2
GeneID:416157 KEGG:gga:416157 NextBio:20819662 Uniprot:Q5ZIG2
Length = 564
Score = 260 (96.6 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 57/117 (48%), Positives = 74/117 (63%)
Query: 25 TNRDLRIREDIPKYLLNLDENSAYYDPKIRSMRED--LNPDDNPNEKFYAGYNRYRMGGQ 82
T R+LRIREDI KYL NLD NSAYYDPK R+MRE+ N NP+E YAG N R G
Sbjct: 242 TVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANTGKNPDEVGYAGDNFVRYTGD 301
Query: 83 ALEWKQVNIHAWKASGRGQDIHPEAALTQAELHYRWEKDIEEKKRLCKKEKIMEKYG 139
+ Q + AW+A +G ++H +A T+ EL Y+ K +E + +KE I+EKYG
Sbjct: 302 TISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKSFKVKKEDFKAQQKESILEKYG 358
>UNIPROTKB|F1NRP0 [details] [associations]
symbol:SLU7 "Pre-mRNA-splicing factor SLU7" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000380 "alternative mRNA splicing, via spliceosome"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0000389 "mRNA 3'-splice site
recognition" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=IEA] [GO:0030628
"pre-mRNA 3'-splice site binding" evidence=IEA] [GO:0033554
"cellular response to stress" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] InterPro:IPR001878 SMART:SM00343
GO:GO:0005737 GO:GO:0006886 GO:GO:0033554 GO:GO:0016607
GO:GO:0008270 GO:GO:0071013 GO:GO:0030532 GO:GO:0000380
GO:GO:0000389 OMA:PQTLMEM InterPro:IPR021715 Pfam:PF11708
GeneTree:ENSGT00390000002292 GO:GO:0030628 GO:GO:0000386
EMBL:AADN02035864 IPI:IPI00818963 Ensembl:ENSGALT00000002279
ArrayExpress:F1NRP0 Uniprot:F1NRP0
Length = 582
Score = 260 (96.6 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 57/117 (48%), Positives = 74/117 (63%)
Query: 25 TNRDLRIREDIPKYLLNLDENSAYYDPKIRSMRED--LNPDDNPNEKFYAGYNRYRMGGQ 82
T R+LRIREDI KYL NLD NSAYYDPK R+MRE+ N NP+E YAG N R G
Sbjct: 260 TVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANTGKNPDEVGYAGDNFVRYTGD 319
Query: 83 ALEWKQVNIHAWKASGRGQDIHPEAALTQAELHYRWEKDIEEKKRLCKKEKIMEKYG 139
+ Q + AW+A +G ++H +A T+ EL Y+ K +E + +KE I+EKYG
Sbjct: 320 TISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKSFKVKKEDFKAQQKESILEKYG 376
>FB|FBgn0039626 [details] [associations]
symbol:Slu7 "Slu7" species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007052 "mitotic spindle organization"
evidence=IMP] InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
EMBL:AE014297 GO:GO:0007052 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0005681 GO:GO:0000389 eggNOG:NOG251791
KO:K12819 OMA:PQTLMEM InterPro:IPR021715 Pfam:PF11708 CTD:10569
GeneTree:ENSGT00390000002292 GO:GO:0030628 EMBL:AY061470
RefSeq:NP_651659.2 UniGene:Dm.3588 IntAct:Q9VAQ7 MINT:MINT-806770
STRING:Q9VAQ7 PaxDb:Q9VAQ7 EnsemblMetazoa:FBtr0085418 GeneID:43427
KEGG:dme:Dmel_CG1420 UCSC:CG1420-RA FlyBase:FBgn0039626
InParanoid:Q9VAQ7 OrthoDB:EOG4JDFP0 PhylomeDB:Q9VAQ7
GenomeRNAi:43427 NextBio:833867 Bgee:Q9VAQ7 Uniprot:Q9VAQ7
Length = 574
Score = 238 (88.8 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 56/118 (47%), Positives = 69/118 (58%)
Query: 25 TNRDLRIREDIPKYLLNLDENSAYYDPKIRSMREDLNPDDNPNEKFYAGYNRYRMGGQAL 84
T R+LRIRED KYL NLD NSAYYDPK RSMR++ NP E +AG N R G
Sbjct: 234 TVRNLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNPNPAVPEEEAEFAGENFVRFSGDTT 293
Query: 85 EWKQVNIHAWKASGRGQDIHPEAALTQAELHYRWEKDIEEKKRLCK---KEKIMEKYG 139
+ AW+A G+G D+H A T+ EL +K+ E+KK K K I+EKYG
Sbjct: 294 AQATAQLFAWEAHGKGVDVHLLAEPTKLEL---LQKEYEQKKEQFKSSTKTHIVEKYG 348
>GENEDB_PFALCIPARUM|PFF0500c [details] [associations]
symbol:PFF0500c "step II splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] InterPro:IPR001878 SMART:SM00343 GO:GO:0008380
GO:GO:0008270 GO:GO:0005681 GO:GO:0003676 EMBL:AL844505
HOGENOM:HOG000194391 KO:K12819 OMA:PQTLMEM InterPro:IPR021715
Pfam:PF11708 RefSeq:XP_966091.1 ProteinModelPortal:C6KSU8
PRIDE:C6KSU8 EnsemblProtists:PFF0500c:mRNA GeneID:3885881
KEGG:pfa:PFF0500c EuPathDB:PlasmoDB:PF3D7_0610100
ProtClustDB:CLSZ2432798 Uniprot:C6KSU8
Length = 444
Score = 233 (87.1 bits), Expect = 5.8e-19, P = 5.8e-19
Identities = 52/118 (44%), Positives = 75/118 (63%)
Query: 27 RDLRIREDIPKYLLNLDENSAYYDPKIRSMRED----LNPDDNPNEKFYAGYNRYRMGGQ 82
R+LRIRED KYL NL NSA+YDPK RSMRED + N ++ +Y G N Y
Sbjct: 243 RNLRIREDTAKYLYNLSLNSAFYDPKSRSMREDPFANIRKHLNDDDNYYKGENYYNNTDD 302
Query: 83 ALEWKQVNIHAWKASGRGQDIHPEAALTQAELHYRWEKDIEEKKRLCKK--EKIMEKY 138
A+E K++ + AW++ RG+++H A TQ EL Y+ + +E+KK++ KK E I++ Y
Sbjct: 303 AIESKKLEVFAWESYKRGENVHFNAQPTQLELMYK--EYLEKKKKIIKKKQEDILKTY 358
>UNIPROTKB|C6KSU8 [details] [associations]
symbol:PFF0500c "Step II splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001878 SMART:SM00343 GO:GO:0008380 GO:GO:0008270
GO:GO:0005681 GO:GO:0003676 EMBL:AL844505 HOGENOM:HOG000194391
KO:K12819 OMA:PQTLMEM InterPro:IPR021715 Pfam:PF11708
RefSeq:XP_966091.1 ProteinModelPortal:C6KSU8 PRIDE:C6KSU8
EnsemblProtists:PFF0500c:mRNA GeneID:3885881 KEGG:pfa:PFF0500c
EuPathDB:PlasmoDB:PF3D7_0610100 ProtClustDB:CLSZ2432798
Uniprot:C6KSU8
Length = 444
Score = 233 (87.1 bits), Expect = 5.8e-19, P = 5.8e-19
Identities = 52/118 (44%), Positives = 75/118 (63%)
Query: 27 RDLRIREDIPKYLLNLDENSAYYDPKIRSMRED----LNPDDNPNEKFYAGYNRYRMGGQ 82
R+LRIRED KYL NL NSA+YDPK RSMRED + N ++ +Y G N Y
Sbjct: 243 RNLRIREDTAKYLYNLSLNSAFYDPKSRSMREDPFANIRKHLNDDDNYYKGENYYNNTDD 302
Query: 83 ALEWKQVNIHAWKASGRGQDIHPEAALTQAELHYRWEKDIEEKKRLCKK--EKIMEKY 138
A+E K++ + AW++ RG+++H A TQ EL Y+ + +E+KK++ KK E I++ Y
Sbjct: 303 AIESKKLEVFAWESYKRGENVHFNAQPTQLELMYK--EYLEKKKKIIKKKQEDILKTY 358
>DICTYBASE|DDB_G0281901 [details] [associations]
symbol:slu7 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA;ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
dictyBase:DDB_G0281901 GenomeReviews:CM000152_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006397 GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000043 GO:GO:0000375 eggNOG:NOG251791 KO:K12819
OMA:PQTLMEM InterPro:IPR021715 Pfam:PF11708 RefSeq:XP_640489.1
STRING:Q54TA0 EnsemblProtists:DDB0233423 GeneID:8623303
KEGG:ddi:DDB_G0281901 ProtClustDB:CLSZ2846778 Uniprot:Q54TA0
Length = 558
Score = 229 (85.7 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 50/116 (43%), Positives = 75/116 (64%)
Query: 25 TNRDLRIREDIPKYLLNLDENSAYYDPKIRSMREDLNPDDNPNEKFYAGYNRYRMGGQAL 84
T R+LRIRED KYL NLD NSA+Y+PK RSMR++ P+ NPN+ +AG N R G+
Sbjct: 226 TIRNLRIREDTAKYLYNLDVNSAFYEPKSRSMRDNPLPNANPNDIKFAGDNFARTSGETK 285
Query: 85 EWKQVNIHAWKASGRGQDIHPEAALTQAEL-HYRWEKDIEEKKRLCKKEKIMEKYG 139
E++ + AW+A +GQD+ +A +QA L H + + E+ K+ + + ++ KYG
Sbjct: 286 EFRDLQRFAWEAQEKGQDVDISSAPSQAALLHADFLRKKEQLKQQTRNQ-LLTKYG 340
>ASPGD|ASPL0000074217 [details] [associations]
symbol:AN4788 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 GO:GO:0008380
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:BN001303 EMBL:AACD01000081 eggNOG:NOG251791
HOGENOM:HOG000194391 KO:K12819 InterPro:IPR021715 Pfam:PF11708
OMA:DSAKYDP EMBL:DQ157008 RefSeq:XP_662392.1 STRING:Q5B3U2
EnsemblFungi:CADANIAT00005634 GeneID:2872587 KEGG:ani:AN4788.2
OrthoDB:EOG49GPRB Uniprot:Q5B3U2
Length = 466
Score = 197 (74.4 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 50/118 (42%), Positives = 67/118 (56%)
Query: 23 TGTNRDLRIREDIPKYLLNLDENSAYYDPKIRSMREDLNPDDNPNEKFYAGYNRYRMGGQ 82
T T R+LRIRED KYLLNLD +SA YDPK R M D+ ++ A N R G
Sbjct: 183 TAT-RNLRIREDTAKYLLNLDLDSAKYDPKTRRM-VDMGAAEDQAAALVAEENFVRSSGD 240
Query: 83 ALEWKQVNIHAWKASGRG-QDIHPEAALTQAELHYRWEKDIEEKKRLCKKEKIMEKYG 139
A E+++ +AW+A RG Q IH +A T E+ + E E KR ++ ++EKYG
Sbjct: 241 AAEFERAQRYAWEAQERGTQKIHLQANPTSGEITRKKELAESEAKRDAHRKALLEKYG 298
>UNIPROTKB|Q51LA6 [details] [associations]
symbol:SLU7 "Pre-mRNA-splicing factor SLU7" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 GO:GO:0008380
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:CM000230 EMBL:CM001237 eggNOG:NOG251791
KO:K12819 InterPro:IPR021715 Pfam:PF11708 OrthoDB:EOG49GPRB
RefSeq:XP_003720714.1 STRING:Q51LA6 EnsemblFungi:MGG_02985T0
GeneID:2682538 KEGG:mgr:MGG_02985 Uniprot:Q51LA6
Length = 474
Score = 183 (69.5 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 43/117 (36%), Positives = 66/117 (56%)
Query: 25 TNRDLRIREDIPKYLLNLDENSAYYDPKIRSMREDLNPDDNPNEKFYAGYNRYRMGGQAL 84
+ R LR+RED KYLLNLD +SA YDPK R++ D ++ + YA R G A
Sbjct: 185 STRQLRLREDTAKYLLNLDLDSAKYDPKTRTI-VDAGATNDKTAELYAEQGFLRQSGDAA 243
Query: 85 EWKQVNIHAWKASGRGQD--IHPEAALTQAELHYRWEKDIEEKKRLCKKEKIMEKYG 139
E+++ +AW+A +G D +H +A T + K+ E+ KR ++ ++ EKYG
Sbjct: 244 EFEKAQRYAWEAQEKGGDTSLHLQANPTAGSYMRKKLKEEEDAKREERERQLREKYG 300
>WB|WBGene00010629 [details] [associations]
symbol:K07C5.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0018996 "molting cycle,
collagen and cuticulin-based cuticle" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0008340 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
GO:GO:0008380 GO:GO:0046872 GO:GO:0018996 GO:GO:0008270
GO:GO:0006397 GO:GO:0040011 GO:GO:0005681 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 EMBL:Z71181
eggNOG:NOG251791 HOGENOM:HOG000194391 KO:K12819 InterPro:IPR021715
Pfam:PF11708 GeneTree:ENSGT00390000002292 PIR:T23407
RefSeq:NP_505661.1 ProteinModelPortal:Q21278 STRING:Q21278
PaxDb:Q21278 EnsemblMetazoa:K07C5.6.1 EnsemblMetazoa:K07C5.6.2
GeneID:179443 KEGG:cel:CELE_K07C5.6 UCSC:K07C5.6.1 CTD:179443
WormBase:K07C5.6 InParanoid:Q21278 OMA:TESYIEY NextBio:905420
Uniprot:Q21278
Length = 647
Score = 180 (68.4 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 50/121 (41%), Positives = 65/121 (53%)
Query: 25 TNRDLRIREDIPKYLLNLDENSAYYDPKIRSMREDLNPDDNPNEKF-----YAGYNRYRM 79
T R+LRIRED KYL NL ENS YYDPK RSMRE NP K ++G N R
Sbjct: 236 TVRNLRIREDTAKYLYNLAENSPYYDPKSRSMRE--NPFAGVAGKELEAARFSGDNFVRY 293
Query: 80 GGQALEWKQVNIHAWKASGRGQDIHPEAALTQAE-LHYRWEKDIEEKKRLCKKEKIMEKY 138
G+ + + AW+A+ G H A T+ E L +EK+ K +KE +++KY
Sbjct: 294 SGEVTAANEAQVFAWQATRGGVYAHSIAEPTKLEALKKEYEKEKSTLKNETQKE-LLDKY 352
Query: 139 G 139
G
Sbjct: 353 G 353
>POMBASE|SPBC365.05c [details] [associations]
symbol:slu7 "splicing factor Slu7" species:4896
"Schizosaccharomyces pombe" [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=ISO]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=ISO] InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
PomBase:SPBC365.05c GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676 GO:GO:0000350
eggNOG:NOG251791 HOGENOM:HOG000194391 KO:K12819 InterPro:IPR021715
Pfam:PF11708 OrthoDB:EOG49GPRB PIR:T40312 RefSeq:NP_596034.1
IntAct:Q9Y7Y2 EnsemblFungi:SPBC365.05c.1 GeneID:2540941
KEGG:spo:SPBC365.05c NextBio:20802056 Uniprot:Q9Y7Y2
Length = 379
Score = 145 (56.1 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 37/130 (28%), Positives = 65/130 (50%)
Query: 15 VCGNGSGITGTNRDLRIREDIPKYLLNLDENSAYYDPKIRSMREDLNPDDNPNEKFYAGY 74
V G+ + T LR+RED+ YL D + Y+PK RSMR++ + AG+
Sbjct: 207 VSGSEDSASITTPSLRMREDVVAYL-RADNKNLQYEPKSRSMRDETGYHMVDDSSGGAGF 265
Query: 75 NRYRMGGQALEWKQVNIHAWKASGRGQDIHPEAALTQAELHYRWEKDIEEKKRLCKKEKI 134
+ GG+ +++++ + AW+A G +H A T EL +R K + + I
Sbjct: 266 VK-ASGGEKEDFEKLQMFAWEAERSGTRVHVVANPTAGELEFRKNKASRMTTQKHIDQSI 324
Query: 135 MEKYGNAASE 144
+++YG+ S+
Sbjct: 325 LDRYGDGTSK 334
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.134 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 145 145 0.00071 103 3 11 23 0.38 32
30 0.49 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 600 (64 KB)
Total size of DFA: 160 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.66u 0.10s 15.76t Elapsed: 00:00:03
Total cpu time: 15.66u 0.10s 15.76t Elapsed: 00:00:03
Start: Fri May 10 22:12:47 2013 End: Fri May 10 22:12:50 2013