BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032228
(145 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P56331|IF1A_ONOVI Eukaryotic translation initiation factor 1A OS=Onobrychis
viciifolia PE=2 SV=2
Length = 145
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 126/145 (86%), Positives = 134/145 (92%)
Query: 1 MPKNKGKGGKNRKRGKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCH 60
MPKNKGKGGKNRKRGKNEADD+KREL+FKEDGQEYAQVLRMLGNGRCEAMCIDG KRLCH
Sbjct: 1 MPKNKGKGGKNRKRGKNEADDDKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 60
Query: 61 IRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPETTRLNEGIA 120
IRGKMHKKVWI AGDIILVGLRDYQDDKADVILK MPDEARLLKAYGELP+ TRLNEGI
Sbjct: 61 IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKLMPDEARLLKAYGELPDNTRLNEGIG 120
Query: 121 AGIDDDDEAGPDNYIEFEDEDIDRI 145
AG D++ ++YIEFEDEDID+I
Sbjct: 121 AGGLDEEMDTANDYIEFEDEDIDKI 145
>sp|P47815|IF1A_WHEAT Eukaryotic translation initiation factor 1A OS=Triticum aestivum
PE=1 SV=2
Length = 144
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 120/146 (82%), Positives = 132/146 (90%), Gaps = 3/146 (2%)
Query: 1 MPKNKGKGGKNRKRGKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCH 60
MPKNKGKGGKNRKRGKNEADD+KREL+FKEDGQEYAQV RMLGNGRCEA+C+DG KRLCH
Sbjct: 1 MPKNKGKGGKNRKRGKNEADDDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCH 60
Query: 61 IRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPETTRLNEGIA 120
IRGKMHKKVWI AGDI+LVGLRDYQDDKADVILKYM DEARLLKAYGELP+T RLNEG+
Sbjct: 61 IRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTVRLNEGVD 120
Query: 121 AGIDDDDEA-GPDNYIEFEDEDIDRI 145
+D +E G +YI+FEDEDID+I
Sbjct: 121 --VDGPEEGEGDSDYIQFEDEDIDKI 144
>sp|Q5RA42|IF1AX_PONAB Eukaryotic translation initiation factor 1A, X-chromosomal OS=Pongo
abelii GN=EIF1AX PE=2 SV=3
Length = 144
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 99/128 (77%), Positives = 108/128 (84%)
Query: 1 MPKNKGKGGKNRKRGKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCH 60
MPKNKGKGGKNR+RGKNE + EKREL+FKEDGQEYAQV++MLGNGR EAMC DG KRLCH
Sbjct: 1 MPKNKGKGGKNRRRGKNENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCH 60
Query: 61 IRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPETTRLNEGIA 120
IRGK+ KKVWI DIILVGLRDYQD+KADVILKY DEAR LKAYGELPE ++NE
Sbjct: 61 IRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDT 120
Query: 121 AGIDDDDE 128
G DDDE
Sbjct: 121 FGPGDDDE 128
>sp|Q8BMJ3|IF1AX_MOUSE Eukaryotic translation initiation factor 1A, X-chromosomal OS=Mus
musculus GN=Eif1ax PE=2 SV=3
Length = 144
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 99/128 (77%), Positives = 108/128 (84%)
Query: 1 MPKNKGKGGKNRKRGKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCH 60
MPKNKGKGGKNR+RGKNE + EKREL+FKEDGQEYAQV++MLGNGR EAMC DG KRLCH
Sbjct: 1 MPKNKGKGGKNRRRGKNENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCH 60
Query: 61 IRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPETTRLNEGIA 120
IRGK+ KKVWI DIILVGLRDYQD+KADVILKY DEAR LKAYGELPE ++NE
Sbjct: 61 IRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDT 120
Query: 121 AGIDDDDE 128
G DDDE
Sbjct: 121 FGPGDDDE 128
>sp|P47813|IF1AX_HUMAN Eukaryotic translation initiation factor 1A, X-chromosomal OS=Homo
sapiens GN=EIF1AX PE=1 SV=2
Length = 144
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 99/128 (77%), Positives = 108/128 (84%)
Query: 1 MPKNKGKGGKNRKRGKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCH 60
MPKNKGKGGKNR+RGKNE + EKREL+FKEDGQEYAQV++MLGNGR EAMC DG KRLCH
Sbjct: 1 MPKNKGKGGKNRRRGKNENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCH 60
Query: 61 IRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPETTRLNEGIA 120
IRGK+ KKVWI DIILVGLRDYQD+KADVILKY DEAR LKAYGELPE ++NE
Sbjct: 61 IRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDT 120
Query: 121 AGIDDDDE 128
G DDDE
Sbjct: 121 FGPGDDDE 128
>sp|Q6GVM3|IF1AY_PANTR Eukaryotic translation initiation factor 1A, Y-chromosomal OS=Pan
troglodytes GN=EIF1AY PE=2 SV=3
Length = 144
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 98/129 (75%), Positives = 108/129 (83%)
Query: 1 MPKNKGKGGKNRKRGKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCH 60
MPKNKGKGGKNR+RGKNE + EKREL+FKEDGQEYAQV++MLGNGR EA+C DG KRLCH
Sbjct: 1 MPKNKGKGGKNRRRGKNENESEKRELVFKEDGQEYAQVIKMLGNGRLEALCFDGVKRLCH 60
Query: 61 IRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPETTRLNEGIA 120
IRGK+ KKVWI DIILVGLRDYQD+KADVILKY DEAR LKAYGELPE ++NE
Sbjct: 61 IRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDT 120
Query: 121 AGIDDDDEA 129
G DDDE
Sbjct: 121 FGPGDDDEV 129
>sp|O14602|IF1AY_HUMAN Eukaryotic translation initiation factor 1A, Y-chromosomal OS=Homo
sapiens GN=EIF1AY PE=1 SV=4
Length = 144
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 98/128 (76%), Positives = 108/128 (84%)
Query: 1 MPKNKGKGGKNRKRGKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCH 60
MPKNKGKGGKNR+RGKNE + EKREL+FKEDGQEYAQV++MLGNGR EA+C DG KRLCH
Sbjct: 1 MPKNKGKGGKNRRRGKNENESEKRELVFKEDGQEYAQVIKMLGNGRLEALCFDGVKRLCH 60
Query: 61 IRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPETTRLNEGIA 120
IRGK+ KKVWI DIILVGLRDYQD+KADVILKY DEAR LKAYGELPE ++NE
Sbjct: 61 IRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDT 120
Query: 121 AGIDDDDE 128
G DDDE
Sbjct: 121 FGPGDDDE 128
>sp|Q6VV72|IF1A_RAT Eukaryotic translation initiation factor 1A OS=Rattus norvegicus
GN=Eif1a PE=2 SV=3
Length = 144
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 108/128 (84%)
Query: 1 MPKNKGKGGKNRKRGKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCH 60
MPKNKGKGGKNR+RGKNE + EKREL+FKEDGQEYAQV++MLGNGR EAMC DG +RLCH
Sbjct: 1 MPKNKGKGGKNRRRGKNENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVRRLCH 60
Query: 61 IRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPETTRLNEGIA 120
IRGK+ KKVWI DIIL+GLRDYQD+KADVILKY DEAR LKAYGELPE ++NE
Sbjct: 61 IRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDT 120
Query: 121 AGIDDDDE 128
G DDDE
Sbjct: 121 FGPGDDDE 128
>sp|Q60872|IF1A_MOUSE Eukaryotic translation initiation factor 1A OS=Mus musculus
GN=Eif1a PE=2 SV=3
Length = 144
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 108/128 (84%)
Query: 1 MPKNKGKGGKNRKRGKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCH 60
MPKNKGKGGKNR+RGKNE + EKREL+FKEDGQEYAQV++MLGNGR EAMC DG +RLCH
Sbjct: 1 MPKNKGKGGKNRRRGKNENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVRRLCH 60
Query: 61 IRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPETTRLNEGIA 120
IRGK+ KKVWI DIIL+GLRDYQD+KADVILKY DEAR LKAYGELPE ++NE
Sbjct: 61 IRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDT 120
Query: 121 AGIDDDDE 128
G DDDE
Sbjct: 121 FGPGDDDE 128
>sp|P47814|IF1A_RABIT Eukaryotic translation initiation factor 1A OS=Oryctolagus
cuniculus GN=EIF1A PE=1 SV=2
Length = 144
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 96/128 (75%), Positives = 106/128 (82%)
Query: 1 MPKNKGKGGKNRKRGKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCH 60
MPKNKGKGGKNR+RGKNE + EKREL+FKEDGQEYAQV++MLGNGR EAM DG KRL H
Sbjct: 1 MPKNKGKGGKNRRRGKNENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMLFDGVKRLFH 60
Query: 61 IRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPETTRLNEGIA 120
IRGK+ KKVWI DIILVGLR+YQD+KADVILKY DEAR LKAYGELPE ++NE
Sbjct: 61 IRGKLRKKVWINTSDIILVGLREYQDNKADVILKYNADEARSLKAYGELPEHAKINETDT 120
Query: 121 AGIDDDDE 128
G DDDE
Sbjct: 121 FGPGDDDE 128
>sp|Q54YJ6|IF1A_DICDI Eukaryotic translation initiation factor 1A OS=Dictyostelium
discoideum GN=eif1a PE=3 SV=1
Length = 141
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 98/145 (67%), Positives = 113/145 (77%), Gaps = 4/145 (2%)
Query: 1 MPKNKGKGGKNRKRGKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCH 60
MPKNKGKGGKNR+RGKNE +++KREL FKE+GQEYAQVLRMLGNGR EA C DG KRLCH
Sbjct: 1 MPKNKGKGGKNRRRGKNE-NEQKRELQFKEEGQEYAQVLRMLGNGRLEASCFDGEKRLCH 59
Query: 61 IRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPETTRLNEGIA 120
I G++ KK WI GDIIL+ LRDYQ+DKADVIL+Y DEAR LK YGELPET R+NE A
Sbjct: 60 ISGRLRKKEWINNGDIILIQLRDYQNDKADVILRYNVDEARNLKTYGELPETARINETDA 119
Query: 121 AGIDDDDEAGPDNYIEFEDEDIDRI 145
DD E P ++ +D DID +
Sbjct: 120 F---DDVEDIPFEFVAEDDIDIDTL 141
>sp|P55877|IF1A_SCHPO Eukaryotic translation initiation factor 1A OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=tif11 PE=2 SV=2
Length = 138
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 101/128 (78%)
Query: 1 MPKNKGKGGKNRKRGKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCH 60
MPKNKGKGGKNR+RGKNE ++EKREL + E+GQ YAQV +MLGNGR EA C DG KRL H
Sbjct: 1 MPKNKGKGGKNRRRGKNENENEKRELTYAEEGQMYAQVTKMLGNGRIEAACFDGVKRLGH 60
Query: 61 IRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPETTRLNEGIA 120
IRGK+ KKVWI GDIIL+ LR++QD+K DVILKY DEAR LK GELPET ++NE
Sbjct: 61 IRGKLRKKVWINQGDIILLSLREFQDEKGDVILKYTADEARTLKNQGELPETAKINETDT 120
Query: 121 AGIDDDDE 128
G + +D+
Sbjct: 121 FGAEGEDD 128
>sp|P38912|IF1A_YEAST Eukaryotic translation initiation factor 1A OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TIF11 PE=1
SV=1
Length = 153
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 86/113 (76%)
Query: 17 NEADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDI 76
N++D KRELI+KE+GQEYAQ+ +MLGNGR EA C DG KR+ HIRGK+ KKVW+G GDI
Sbjct: 17 NDSDGPKRELIYKEEGQEYAQITKMLGNGRVEASCFDGNKRMAHIRGKLRKKVWMGQGDI 76
Query: 77 ILVGLRDYQDDKADVILKYMPDEARLLKAYGELPETTRLNEGIAAGIDDDDEA 129
ILV LRD+QDD+ DV+ KY DEAR LK GELPE ++NE G + D++
Sbjct: 77 ILVSLRDFQDDQCDVVHKYNLDEARTLKNQGELPENAKINETDNFGFESDEDV 129
>sp|Q8TXZ3|IF1A_METKA Translation initiation factor 1A OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=eIF1A PE=3
SV=1
Length = 111
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Query: 15 GKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAG 74
GK D+ +++ ++G+ + V +MLGN R + C+DG R+ I GKM K+VWI G
Sbjct: 2 GKRIDDETLKKIRLPKEGEIFGVVEKMLGNDRVQVRCVDGKTRVARIPGKMRKRVWIREG 61
Query: 75 DIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPE-TTRLNEGIAAG 122
D++LV ++Q ++ADV +Y + LK G+L E T+L E I G
Sbjct: 62 DVVLVKPWEFQPERADVTWRYTRVQVDWLKRKGKLDERVTKLLEEIIPG 110
>sp|B0R7D8|IF1A_HALS3 Translation initiation factor 1A OS=Halobacterium salinarum (strain
ATCC 29341 / DSM 671 / R1) GN=eIF1A PE=3 SV=1
Length = 95
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%)
Query: 23 KRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLR 82
++ L ED + +A+V MLG R + C DG +R I G+M K++WI DI+LV
Sbjct: 8 RKNLRMPEDDEVFAEVTDMLGANRVQVRCADGEERTARIPGRMQKRIWIREDDIVLVEPW 67
Query: 83 DYQDDKADVILKYMPDEARLLKAYGEL 109
D+QDDKADV +Y +A L+ G +
Sbjct: 68 DWQDDKADVTWRYEKSDADQLREEGHI 94
>sp|Q9HN64|IF1A1_HALSA Translation initiation factor 1A 1 OS=Halobacterium salinarum
(strain ATCC 700922 / JCM 11081 / NRC-1) GN=eIF1A1 PE=3
SV=1
Length = 95
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%)
Query: 23 KRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLR 82
++ L ED + +A+V MLG R + C DG +R I G+M K++WI DI+LV
Sbjct: 8 RKNLRMPEDDEVFAEVTDMLGANRVQVRCADGEERTARIPGRMQKRIWIREDDIVLVEPW 67
Query: 83 DYQDDKADVILKYMPDEARLLKAYGEL 109
D+QDDKADV +Y +A L+ G +
Sbjct: 68 DWQDDKADVTWRYEKSDADQLREEGHI 94
>sp|Q5UZM2|IF1A_HALMA Translation initiation factor 1A OS=Haloarcula marismortui (strain
ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=eif1a
PE=3 SV=2
Length = 95
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 55/92 (59%)
Query: 20 DDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILV 79
+D ++ L E+ + +A V+ MLG R + C+DG +R I GKM K++WI D++LV
Sbjct: 4 NDSRKNLRMPEEDEVFAVVMDMLGANRVKVRCMDGVERTARIPGKMQKRIWIREDDVVLV 63
Query: 80 GLRDYQDDKADVILKYMPDEARLLKAYGELPE 111
D+QD+KAD+ +Y +A L+ G + E
Sbjct: 64 EPWDWQDEKADITWRYEKQDADQLREEGHIQE 95
>sp|Q3IT14|IF1A_NATPD Translation initiation factor 1A OS=Natronomonas pharaonis (strain
DSM 2160 / ATCC 35678) GN=eif1a PE=3 SV=1
Length = 97
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Query: 19 ADDEKRELIFKEDGQE-YAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDII 77
+D+E R+ + +G E +A V MLG R + C+DG +R I G+M K++WI D++
Sbjct: 2 SDNEGRKNLRMPEGDEVFAVVTNMLGANRVKVRCMDGTERTARIPGRMQKRIWIREDDVV 61
Query: 78 LVGLRDYQDDKADVILKYMPDEARLLKAYGELPETT 113
LV D+QD+KADV+ +Y EA L+ G + ++
Sbjct: 62 LVEPWDWQDEKADVVWRYEKQEADQLREEGHITDSV 97
>sp|Q6L2G4|IF1A_PICTO Translation initiation factor 1A OS=Picrophilus torridus (strain
ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828)
GN=eif1a PE=3 SV=1
Length = 108
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%)
Query: 29 KEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDK 88
K+ G+ Y V +M G R MC DG R C I GKM K++WI GD+++V ++QD+K
Sbjct: 17 KKSGEIYGIVEKMSGASRLIVMCEDGVTRNCRIPGKMKKRMWIREGDLVIVKPWEFQDEK 76
Query: 89 ADVILKYMPDEARLLKAYGELPE 111
D+I +Y +A L LPE
Sbjct: 77 GDIIYRYTKTQAAYLSRNHMLPE 99
>sp|Q18EX1|IF1A1_HALWD Translation initiation factor 1A 1 OS=Haloquadratum walsbyi (strain
DSM 16790) GN=eif1a1 PE=3 SV=1
Length = 96
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 19 ADDEKR---ELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGD 75
+DDE R +L +D + +A V MLG R C DG +R I G+M K++WI D
Sbjct: 2 SDDENRGSHDLRMPDDDEVFAVVTNMLGANRVTVRCADGNERTARIPGRMQKRIWIREDD 61
Query: 76 IILVGLRDYQDDKADVILKYMPDEARLLKAYGEL 109
++LV D+QD+K D+ +Y EA L+ G +
Sbjct: 62 VVLVEPWDWQDEKGDITWRYEKSEADQLREEGRI 95
>sp|A2STQ8|IF1A_METLZ Translation initiation factor 1A OS=Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z) GN=eIF1A PE=3 SV=1
Length = 105
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%)
Query: 33 QEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVI 92
+++AQ MLG+ C DG RL I+GK+ K+VWI GDI++V D+QDDK D+I
Sbjct: 29 EQFAQAELMLGSNHIRVRCSDGVTRLGRIKGKIKKRVWIREGDILIVVPWDFQDDKCDII 88
Query: 93 LKYMPDEARLLKAYGEL 109
+Y + L+A+ L
Sbjct: 89 YRYTTPQVDWLRAHKYL 105
>sp|C3N8M9|IF1A_SULIY Translation initiation factor 1A OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=eIF1A PE=3 SV=1
Length = 108
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 24 RELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRD 83
R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D
Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWD 72
Query: 84 YQDDKADVILKYMPDEARLL 103
+Q ++ D++ KY DE + L
Sbjct: 73 FQPNRCDILYKYGNDEIKRL 92
>sp|C3NMA0|IF1A_SULIN Translation initiation factor 1A OS=Sulfolobus islandicus (strain
Y.N.15.51 / Yellowstone #2) GN=eIF1A PE=3 SV=1
Length = 108
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 24 RELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRD 83
R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D
Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWD 72
Query: 84 YQDDKADVILKYMPDEARLL 103
+Q ++ D++ KY DE + L
Sbjct: 73 FQPNRCDILYKYGNDEIKRL 92
>sp|C3MU29|IF1A_SULIM Translation initiation factor 1A OS=Sulfolobus islandicus (strain
M.14.25 / Kamchatka #1) GN=eIF1A PE=3 SV=1
Length = 108
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 24 RELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRD 83
R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D
Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWD 72
Query: 84 YQDDKADVILKYMPDEARLL 103
+Q ++ D++ KY DE + L
Sbjct: 73 FQPNRCDILYKYGNDEIKRL 92
>sp|C3MK60|IF1A_SULIL Translation initiation factor 1A OS=Sulfolobus islandicus (strain
L.S.2.15 / Lassen #1) GN=eIF1A PE=3 SV=1
Length = 108
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 24 RELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRD 83
R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D
Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWD 72
Query: 84 YQDDKADVILKYMPDEARLL 103
+Q ++ D++ KY DE + L
Sbjct: 73 FQPNRCDILYKYGNDEIKRL 92
>sp|C4KK84|IF1A_SULIK Translation initiation factor 1A OS=Sulfolobus islandicus (strain
M.16.4 / Kamchatka #3) GN=eIF1A PE=3 SV=1
Length = 108
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 24 RELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRD 83
R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D
Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWD 72
Query: 84 YQDDKADVILKYMPDEARLL 103
+Q ++ D++ KY DE + L
Sbjct: 73 FQPNRCDILYKYGNDEIKRL 92
>sp|C3N0P1|IF1A_SULIA Translation initiation factor 1A OS=Sulfolobus islandicus (strain
M.16.27) GN=eIF1A PE=3 SV=1
Length = 108
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 24 RELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRD 83
R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D
Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWD 72
Query: 84 YQDDKADVILKYMPDEARLL 103
+Q ++ D++ KY DE + L
Sbjct: 73 FQPNRCDILYKYGNDEIKRL 92
>sp|Q97W62|IF1A_SULSO Translation initiation factor 1A OS=Sulfolobus solfataricus (strain
ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=eIF1A PE=3
SV=1
Length = 108
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 24 RELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRD 83
R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D
Sbjct: 13 RDVPRPEEGQTICVVKKMLGGDHLIVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWD 72
Query: 84 YQDDKADVILKYMPDEARLL 103
+Q ++ D++ KY DE + L
Sbjct: 73 FQPNRCDILYKYGNDEIKRL 92
>sp|Q4JA54|IF1A_SULAC Translation initiation factor 1A OS=Sulfolobus acidocaldarius
(strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 /
NCIMB 11770) GN=eif1a PE=3 SV=1
Length = 108
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%)
Query: 16 KNEADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGD 75
K+ + RE++ +G+ V ++ G + +C DG +RL I GK+ KKVWI GD
Sbjct: 5 KSNTEQPTREVVKPIEGEVICVVKKLFGGEHVQVICTDGKERLGRIPGKLKKKVWIREGD 64
Query: 76 IILVGLRDYQDDKADVILKYMPDEARLL 103
++L D+Q +K D++ +Y E R L
Sbjct: 65 VVLAAPWDFQPNKCDIVYRYTESEVRRL 92
>sp|Q974Z9|IF1A_SULTO Translation initiation factor 1A OS=Sulfolobus tokodaii (strain DSM
16993 / JCM 10545 / NBRC 100140 / 7) GN=eIF1A PE=3 SV=2
Length = 108
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 13 KRGKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIG 72
K+ NE K E+ +G+ V +MLG + +C+DG +RL I GKM KK+W+
Sbjct: 3 KKKTNEQPSVK-EVPKPAEGEVICVVKKMLGAEHVQVICLDGKERLGRIPGKMKKKMWVK 61
Query: 73 AGDIILVGLRDYQDDKADVILKYMPDEARLL 103
GD++L D+Q +K D+I KY E R L
Sbjct: 62 EGDVVLAAPWDFQPNKCDIIYKYSESEVRRL 92
>sp|O29481|IF1A_ARCFU Translation initiation factor 1A OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=eIF1A PE=3 SV=2
Length = 97
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%)
Query: 29 KEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDK 88
++ G+ + V MLG G + C DG +RL I GKM KK+WI GD+++V +Q D+
Sbjct: 15 RKKGELFGVVTSMLGAGHIKVRCEDGVERLARIPGKMRKKIWIREGDVVIVVPWSFQKDR 74
Query: 89 ADVILKYMPDEARLLKAYGEL 109
AD++ +Y + L+ G L
Sbjct: 75 ADIVWRYTNPQVEWLERKGYL 95
>sp|A4YEH8|IF1A_METS5 Translation initiation factor 1A OS=Metallosphaera sedula (strain
ATCC 51363 / DSM 5348) GN=eIF1A PE=3 SV=1
Length = 108
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%)
Query: 30 EDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKA 89
E+G+ V +MLG C+DG +R I G+M KK WI GD++L D+Q KA
Sbjct: 19 EEGEVICVVKKMLGAEHIIIACLDGKERTARIPGRMRKKTWIKEGDVVLAAPWDFQPTKA 78
Query: 90 DVILKYMPDEARLL 103
D++ +YM DE R L
Sbjct: 79 DIVYRYMNDEIRKL 92
>sp|Q2NEP1|IF1A_METST Translation initiation factor 1A OS=Methanosphaera stadtmanae
(strain DSM 3091) GN=eif1a PE=3 SV=1
Length = 111
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 38 VLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQ-DDKADVILKYM 96
V ++LG+G+ + C D RLC I GKM K++WI GD++LV D+Q D+KADVI +Y
Sbjct: 37 VEQILGHGKLKVRCNDKQIRLCRIPGKMKKRIWIREGDVVLVKPWDFQSDEKADVIWRYT 96
Query: 97 PDEARLLKAYGEL 109
EA L+ G L
Sbjct: 97 RTEANYLERRGFL 109
>sp|Q469J2|IF1A1_METBF Translation initiation factor 1A 1 OS=Methanosarcina barkeri
(strain Fusaro / DSM 804) GN=eif1a1 PE=3 SV=1
Length = 96
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%)
Query: 29 KEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDK 88
+E+ + A V +LG+ R C+DG R+ I G +KK+WI GD+++V D QD K
Sbjct: 15 RENHEVLATVSSLLGSKRVTLQCMDGVVRMGRIPGSKNKKMWIHEGDVVIVAPWDIQDSK 74
Query: 89 ADVILKYMPDEARLLKAYGEL 109
ADVI KY + L+ G L
Sbjct: 75 ADVIWKYTRPQVEWLERKGYL 95
>sp|B8D5N1|IF1A_DESK1 Translation initiation factor 1A OS=Desulfurococcus kamchatkensis
(strain 1221n / DSM 18924) GN=eIF1A PE=3 SV=1
Length = 116
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%)
Query: 30 EDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKA 89
++G V+R LG A C+DG R I GK+ +KVWI GDIILVGL D+ +K
Sbjct: 25 DEGTIICGVVRHLGGDYLIAKCLDGVDRKIRIPGKLRRKVWITEGDIILVGLWDFSSEKG 84
Query: 90 DVILKYMPDEARLLKAYGELPE 111
+V+ KY +E L G +P+
Sbjct: 85 EVVYKYGKNEVNKLVEKGVVPK 106
>sp|Q8TSA3|IF1A1_METAC Translation initiation factor 1A 1 OS=Methanosarcina acetivorans
(strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
GN=eIF1A1 PE=3 SV=1
Length = 111
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%)
Query: 29 KEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDK 88
+E+ + A V +LG R C+DG R+ I G M KK WI GD+++V ++Q++K
Sbjct: 29 RENNEILATVESLLGANRLRLRCMDGVVRMGRIPGSMKKKTWIREGDVVIVVPWEFQNEK 88
Query: 89 ADVILKYMPDEARLLKAYGEL 109
ADVI KY + L+ G L
Sbjct: 89 ADVIWKYTRPQVDWLERKGYL 109
>sp|Q03590|IF1A_THEAC Translation initiation factor 1A OS=Thermoplasma acidophilum
(strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 /
AMRC-C165) GN=eIF1A PE=3 SV=2
Length = 119
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%)
Query: 29 KEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDK 88
K+ G+ + V +M G R MC DG R I G+M K++WI D+++V ++Q +K
Sbjct: 31 KKKGEMFGIVEKMEGASRLSVMCEDGYTRNARIPGRMRKRMWIREKDLVIVKPWEFQPEK 90
Query: 89 ADVILKYMPDEARLLKAYGELPET 112
ADV+ +Y +A L LPE
Sbjct: 91 ADVVYRYTKTQASYLSRNHMLPEV 114
>sp|Q979F7|IF1A_THEVO Translation initiation factor 1A OS=Thermoplasma volcanium (strain
ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
GN=eIF1A PE=3 SV=1
Length = 123
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%)
Query: 29 KEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDK 88
K+ G+ + V +M G R MC DG R I G+M K++WI D+++V ++Q +K
Sbjct: 35 KKKGEMFGIVEKMEGASRLSVMCEDGYTRNARIPGRMRKRMWIREKDLVIVKPWEFQPEK 94
Query: 89 ADVILKYMPDEARLLKAYGELPET 112
ADV+ +Y +A L LPE
Sbjct: 95 ADVVYRYTKTQASYLSRNHMLPEV 118
>sp|Q8TR33|IF1A2_METAC Translation initiation factor 1A 2 OS=Methanosarcina acetivorans
(strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
GN=eIF1A2 PE=3 SV=1
Length = 105
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 12 RKRGKNEADDEKRELIF-----KEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMH 66
RKR + A +E+ KE+ + A V +LG+ R C+DG R+ I G +
Sbjct: 2 RKRREGSAAPSTQEVTRVRTPRKENHEVLATVGSLLGSKRVNLQCMDGVVRMGRIPGSKN 61
Query: 67 KKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGEL 109
KK+WI GD+++V + QD KADVI KY + L+ G L
Sbjct: 62 KKMWIREGDVVIVTPWEIQDTKADVIWKYTRPQIEWLERKGYL 104
>sp|Q8PUJ8|IF1A2_METMA Translation initiation factor 1A 2 OS=Methanosarcina mazei (strain
ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM
88) GN=eIF1A2 PE=3 SV=1
Length = 106
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%)
Query: 29 KEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDK 88
KE+ + A V +LG+ R C+DG R+ I G +KK+WI GDI++ + QD K
Sbjct: 25 KENHEVLATVGSLLGSKRVNLQCMDGVVRMGRIPGSKNKKMWIREGDIVIATPWEIQDSK 84
Query: 89 ADVILKYMPDEARLLKAYGEL 109
ADVI KY + L+ G L
Sbjct: 85 ADVIWKYTRPQIEWLERKGYL 105
>sp|Q8PVF1|IF1A1_METMA Translation initiation factor 1A 1 OS=Methanosarcina mazei (strain
ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM
88) GN=eIF1A1 PE=3 SV=2
Length = 111
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%)
Query: 29 KEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDK 88
+E+ + A V +LG R C+DG R+ I G M KK WI GD+++ ++Q++K
Sbjct: 29 RENNEILATVESLLGANRLRLRCMDGVVRMGRIPGSMKKKAWIREGDVVIAVPWEFQNEK 88
Query: 89 ADVILKYMPDEARLLKAYGEL 109
ADVI KY + L+ G L
Sbjct: 89 ADVIWKYTRPQVDWLERKGYL 109
>sp|Q12YN5|IF1A_METBU Translation initiation factor 1A OS=Methanococcoides burtonii
(strain DSM 6242) GN=eif1a PE=3 SV=1
Length = 106
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%)
Query: 29 KEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDK 88
+E+ + A V +LG R C+DG R+ I G K++W+ GDI+++ D+QD K
Sbjct: 25 RENNEILATVSALLGGKRVTLQCMDGIVRMGRIPGSKKKRMWVREGDIVIITPWDFQDSK 84
Query: 89 ADVILKYMPDEARLLKAYGEL 109
A+VI KY + L+ G L
Sbjct: 85 AEVIWKYTRPQVEWLERKGFL 105
>sp|Q8TR31|IF1A3_METAC Translation initiation factor 1A 3 OS=Methanosarcina acetivorans
(strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
GN=eIF1A3 PE=3 SV=1
Length = 110
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 5 KGKGGKNRKRGKNEADDEKRELIFKEDGQEY-AQVLRMLGNGRCEAMCIDGAKRLCHIRG 63
K + G N+ + R ++D E A V +LG+ R C+DG R+ I G
Sbjct: 4 KRQSGSNKSVSSGNNQEVTRVRTPRKDRNEVLATVASLLGSKRVTLQCMDGVVRMGRIPG 63
Query: 64 KMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGEL 109
+KK+W+ GD+++ + QD KADVI KY + L+ G L
Sbjct: 64 SKNKKMWVREGDVVIANPWEIQDSKADVIWKYTKPQVDWLERKGYL 109
>sp|Q469I9|IF1A2_METBF Translation initiation factor 1A 2 OS=Methanosarcina barkeri
(strain Fusaro / DSM 804) GN=eif1a2 PE=3 SV=1
Length = 115
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 29 KEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDK 88
K+ + A VL +LG+ R C+DG R+ I G K++WI GDI++ + QD K
Sbjct: 34 KDRNEVLATVLNLLGSKRVTLQCMDGVVRMGRIPGSKKKRMWIREGDIVIANPWEIQDSK 93
Query: 89 ADVILKYMPDEARLLKAYGEL 109
ADV KY + L+ G L
Sbjct: 94 ADVTWKYTRPQVEWLERKGYL 114
>sp|O27085|IF1A_METTH Translation initiation factor 1A OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=eIF1A PE=3 SV=1
Length = 99
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 15 GKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAG 74
+ E R + G+ V +++G+G+ + C DG RL I GKM K++WI G
Sbjct: 2 SRGHQTQEVRRVRTPRRGEIPGVVEQIMGHGKLKVRCADGHIRLGRIPGKMKKRIWIREG 61
Query: 75 DIILVGLRDYQ-DDKADVILKYMPDEARLLKAYGEL 109
D++LV ++Q ++KAD++ +Y E+ L+ G L
Sbjct: 62 DVVLVKPWEFQSEEKADIVWRYTRTESNWLERKGYL 97
>sp|Q9HP87|IF1A2_HALSA Translation initiation factor 1A 2 OS=Halobacterium salinarum
(strain ATCC 700922 / JCM 11081 / NRC-1) GN=eIF1A2 PE=3
SV=2
Length = 94
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%)
Query: 23 KRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLR 82
+R L D + +A V R G C DG +R+ I G+M + WI GD++L
Sbjct: 7 RRNLRMPNDDEVFAVVKRHDGGNHVTLQCEDGKERMGRIPGRMKYRTWINEGDVVLAEPW 66
Query: 83 DYQDDKADVILKYMPDEARLLKAYGEL 109
D+QD+KA+V +Y +A L+ G +
Sbjct: 67 DWQDEKANVEWRYSDQDADQLREEGHI 93
>sp|P57676|IF1A_AERPE Translation initiation factor 1A OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=eIF1A PE=3 SV=1
Length = 111
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%)
Query: 29 KEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDK 88
+++G V R++G G E +C DG + I GKM ++VW+ GD++L D K
Sbjct: 19 EDEGTMLCIVQRVVGAGFLEVLCTDGEVYMARIPGKMRRRVWMREGDVVLFLPWGTADKK 78
Query: 89 ADVILKYMPDEARLLKAYGELPE 111
+V+ +Y+ DE R L LPE
Sbjct: 79 GEVVYRYLRDEVRKLIDMNLLPE 101
>sp|Q18JF4|IF1A2_HALWD Translation initiation factor 1A 2 OS=Haloquadratum walsbyi (strain
DSM 16790) GN=eif1a2 PE=3 SV=1
Length = 94
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 23 KRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLR 82
+R L D + +A V+ G C DG R+ I G+M + WI GD++LV
Sbjct: 7 RRNLRMPSDDEMFAVVVEHNGGNHVRVRCQDGENRMGRIPGRMKYRTWINEGDVVLVEPW 66
Query: 83 DYQDDKADVILKYMPDEARLLKAYGEL 109
+QD+KA++ +Y +A L+ G +
Sbjct: 67 AWQDEKANIEWRYSEQDAEQLRTEGHI 93
>sp|Q57887|IF1A_METJA Translation initiation factor 1A OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=eIF1A PE=1 SV=1
Length = 102
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 29 KEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQ-DD 87
KE+ + + +MLG R C+DG RL I G++ ++W+ GD+++V + Q D
Sbjct: 17 KEENEILGIIEQMLGASRVRVRCLDGKTRLGRIPGRLKNRIWVREGDVVIVKPWEVQGDQ 76
Query: 88 KADVILKYMPDEARLLKAYGELPE 111
K D+I +Y + LK G L E
Sbjct: 77 KCDIIWRYTKTQVEWLKRKGYLDE 100
>sp|A6UUK8|IF1A_META3 Translation initiation factor 1A OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=eIF1A PE=3 SV=1
Length = 105
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 40 RMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDD-KADVILKYMPD 98
+MLG R C+DG R+ I GK+ +K+W+ GDI++V + Q D K D+I +Y
Sbjct: 30 QMLGASRVRVRCMDGHTRMGRIPGKLKRKIWVREGDIVIVVPWEVQSDQKCDIIWRYTKG 89
Query: 99 EARLLKAYGEL 109
+ L G L
Sbjct: 90 QVSWLSKKGYL 100
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.141 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,347,741
Number of Sequences: 539616
Number of extensions: 2886595
Number of successful extensions: 8223
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 8130
Number of HSP's gapped (non-prelim): 100
length of query: 145
length of database: 191,569,459
effective HSP length: 106
effective length of query: 39
effective length of database: 134,370,163
effective search space: 5240436357
effective search space used: 5240436357
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)