Query 032235
Match_columns 144
No_of_seqs 144 out of 871
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 11:24:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032235.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/032235hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2265 Nuclear distribution p 100.0 4.3E-31 9.3E-36 200.0 9.5 133 1-133 1-137 (179)
2 cd06495 p23_NUDCD3_like p23-li 100.0 1E-27 2.2E-32 169.3 12.2 94 18-112 4-102 (102)
3 cd06492 p23_mNUDC_like p23-lik 99.9 4.8E-26 1E-30 156.3 10.2 84 21-104 1-87 (87)
4 cd06494 p23_NUDCD2_like p23-li 99.9 2.1E-25 4.5E-30 155.1 10.9 86 18-104 5-93 (93)
5 cd06493 p23_NUDCD1_like p23_NU 99.9 3E-25 6.5E-30 151.1 10.6 84 21-104 1-85 (85)
6 cd06467 p23_NUDC_like p23_like 99.9 5.2E-23 1.1E-27 138.8 11.3 84 21-104 1-85 (85)
7 cd06465 p23_hB-ind1_like p23_l 99.9 7.8E-21 1.7E-25 134.4 10.6 90 19-111 1-94 (108)
8 cd06468 p23_CacyBP p23_like do 99.8 1.9E-18 4.1E-23 118.4 10.4 85 19-104 2-92 (92)
9 PF04969 CS: CS domain; Inter 99.8 2.6E-18 5.7E-23 112.9 9.8 75 19-93 1-79 (79)
10 cd06463 p23_like Proteins cont 99.8 4.9E-18 1.1E-22 112.3 9.5 81 23-104 1-84 (84)
11 cd06466 p23_CS_SGT1_like p23_l 99.7 1.9E-17 4.1E-22 111.0 7.9 80 22-103 1-83 (84)
12 cd06469 p23_DYX1C1_like p23_li 99.7 4.8E-17 1E-21 107.9 8.6 77 23-103 1-77 (78)
13 cd00237 p23 p23 binds heat sho 99.7 1.9E-16 4E-21 112.5 10.3 89 18-109 1-92 (106)
14 cd06488 p23_melusin_like p23_l 99.7 3.4E-16 7.4E-21 107.0 9.1 83 20-104 2-87 (87)
15 cd06489 p23_CS_hSgt1_like p23_ 99.7 2.7E-16 5.9E-21 106.3 8.3 81 22-104 1-84 (84)
16 KOG4379 Uncharacterized conser 99.6 1.8E-15 3.9E-20 128.9 8.1 119 13-132 284-407 (596)
17 KOG1309 Suppressor of G2 allel 99.4 3E-13 6.6E-18 103.5 7.5 88 18-107 3-93 (196)
18 PLN03088 SGT1, suppressor of 99.4 1.3E-12 2.7E-17 109.4 9.5 88 18-107 156-246 (356)
19 cd06490 p23_NCB5OR p23_like do 99.4 5.7E-12 1.2E-16 86.2 8.7 81 21-103 1-86 (87)
20 cd00298 ACD_sHsps_p23-like Thi 99.1 1.8E-10 3.9E-15 73.9 6.4 70 23-93 1-80 (80)
21 KOG3158 HSP90 co-chaperone p23 99.1 3.1E-10 6.7E-15 86.5 6.2 90 18-110 7-100 (180)
22 KOG3260 Calcyclin-binding prot 98.8 5.8E-09 1.3E-13 80.3 5.1 84 19-104 75-162 (224)
23 KOG1667 Zn2+-binding protein M 98.6 9.8E-08 2.1E-12 77.0 7.3 95 9-105 202-303 (320)
24 COG0071 IbpA Molecular chapero 98.1 3.8E-05 8.3E-10 56.8 9.2 79 17-96 39-135 (146)
25 cd06472 ACD_ScHsp26_like Alpha 97.9 6.1E-05 1.3E-09 51.4 7.2 73 20-93 1-92 (92)
26 COG5091 SGT1 Suppressor of G2 97.7 2.7E-05 5.8E-10 64.0 3.2 85 19-105 177-265 (368)
27 PF00011 HSP20: Hsp20/alpha cr 97.7 0.00028 6.1E-09 48.5 7.7 74 22-96 1-90 (102)
28 cd06471 ACD_LpsHSP_like Group 97.6 0.00047 1E-08 46.9 7.6 72 20-93 2-93 (93)
29 cd06464 ACD_sHsps-like Alpha-c 97.5 0.00054 1.2E-08 45.1 6.9 70 23-93 2-88 (88)
30 cd06497 ACD_alphaA-crystallin_ 97.2 0.0017 3.7E-08 44.1 6.6 69 24-93 6-86 (86)
31 cd06478 ACD_HspB4-5-6 Alpha-cr 97.1 0.0021 4.5E-08 43.3 6.5 68 25-93 4-83 (83)
32 cd06470 ACD_IbpA-B_like Alpha- 97.1 0.0048 1E-07 42.0 8.1 70 21-93 3-90 (90)
33 cd06498 ACD_alphaB-crystallin_ 97.1 0.0025 5.4E-08 43.1 6.4 69 25-94 4-84 (84)
34 PF08190 PIH1: pre-RNA process 97.0 0.0095 2.1E-07 48.8 10.3 68 25-92 258-327 (328)
35 cd06479 ACD_HspB7_like Alpha c 97.0 0.0037 8E-08 42.2 6.5 69 24-93 4-81 (81)
36 cd06475 ACD_HspB1_like Alpha c 97.0 0.0049 1.1E-07 41.8 7.2 69 22-91 4-84 (86)
37 PRK10743 heat shock protein Ib 97.0 0.0093 2E-07 44.1 9.1 73 19-94 35-124 (137)
38 cd06526 metazoan_ACD Alpha-cry 96.8 0.0042 9.1E-08 41.5 5.4 65 28-93 7-83 (83)
39 cd06476 ACD_HspB2_like Alpha c 96.7 0.0096 2.1E-07 40.2 6.9 67 26-93 5-83 (83)
40 PRK11597 heat shock chaperone 96.7 0.012 2.5E-07 43.9 7.9 73 19-94 33-122 (142)
41 cd06481 ACD_HspB9_like Alpha c 96.0 0.029 6.3E-07 38.1 6.1 65 26-91 5-85 (87)
42 cd06477 ACD_HspB3_Like Alpha c 95.5 0.1 2.2E-06 35.3 7.2 65 25-90 4-80 (83)
43 cd06482 ACD_HspB10 Alpha cryst 94.9 0.17 3.7E-06 34.5 6.8 64 26-90 6-84 (87)
44 PF05455 GvpH: GvpH; InterPro 94.7 0.27 5.9E-06 37.9 8.2 71 24-97 97-171 (177)
45 cd06480 ACD_HspB8_like Alpha-c 89.9 2.1 4.5E-05 29.4 6.7 64 27-91 14-89 (91)
46 COG3354 FlaG Putative archaeal 71.2 9.7 0.00021 28.6 4.6 70 18-94 60-131 (154)
47 KOG0710 Molecular chaperone (s 64.3 17 0.00037 28.1 5.0 76 20-96 84-182 (196)
48 cd06464 ACD_sHsps-like Alpha-c 59.6 29 0.00064 21.9 4.8 35 24-58 52-86 (88)
49 KOG3247 Uncharacterized conser 57.1 9.6 0.00021 33.4 2.6 83 18-103 3-88 (466)
50 cd00298 ACD_sHsps_p23-like Thi 56.6 32 0.0007 20.6 4.5 32 27-58 47-78 (80)
51 KOG3591 Alpha crystallins [Pos 49.4 1E+02 0.0022 23.5 7.0 68 28-96 72-151 (173)
52 cd06526 metazoan_ACD Alpha-cry 45.9 47 0.001 21.6 4.1 31 28-58 50-81 (83)
53 cd06477 ACD_HspB3_Like Alpha c 45.3 44 0.00095 22.3 3.9 31 29-59 51-82 (83)
54 cd06497 ACD_alphaA-crystallin_ 45.2 31 0.00068 23.0 3.2 29 30-58 55-84 (86)
55 PF00011 HSP20: Hsp20/alpha cr 44.9 68 0.0015 21.3 4.9 35 25-59 52-86 (102)
56 cd06479 ACD_HspB7_like Alpha c 43.0 36 0.00077 22.6 3.2 31 29-59 49-80 (81)
57 cd06498 ACD_alphaB-crystallin_ 42.3 34 0.00073 22.7 3.0 30 29-58 51-81 (84)
58 cd06469 p23_DYX1C1_like p23_li 41.7 65 0.0014 20.2 4.3 31 29-59 37-67 (78)
59 cd06472 ACD_ScHsp26_like Alpha 37.2 47 0.001 22.0 3.1 31 28-58 60-90 (92)
60 PF13174 TPR_6: Tetratricopept 33.6 64 0.0014 16.2 2.7 19 116-134 15-33 (33)
61 PF13349 DUF4097: Domain of un 28.8 1.2E+02 0.0026 21.7 4.3 30 27-56 117-146 (166)
62 COG1470 Predicted membrane pro 25.9 96 0.0021 27.8 3.8 25 27-51 443-467 (513)
63 PF15060 PPDFL: Differentiatio 24.2 32 0.0007 24.5 0.5 21 88-108 43-63 (110)
64 PF11069 DUF2870: Protein of u 22.4 2E+02 0.0044 20.1 4.2 37 85-130 27-63 (98)
65 PF10618 Tail_tube: Phage tail 21.2 1.5E+02 0.0033 21.1 3.5 55 4-59 25-82 (119)
66 cd01768 RA RA (Ras-associating 20.6 74 0.0016 20.6 1.7 24 119-142 28-52 (87)
No 1
>KOG2265 consensus Nuclear distribution protein NUDC [Signal transduction mechanisms]
Probab=99.97 E-value=4.3e-31 Score=200.02 Aligned_cols=133 Identities=37% Similarity=0.580 Sum_probs=118.1
Q ss_pred CCCCCCcccccceecCCCCcEEEEeeCCEEEEEEECCCCC-CCCceEEEEeccEEEEEecCCCceecCCCCCCcccCCce
Q 032235 1 MAEKLAPEKRHRFLHNGQTVFEWDQTLDEINIYINLPPNV-HSKQFYCKIQSKHIELGIKGNPPYLNHELTCPVKTDSSF 79 (144)
Q Consensus 1 ~~~~~~~~~r~~~~~ng~~~Y~W~Qt~~~V~V~v~lp~~~-~~kdv~V~~~~~~l~V~v~g~~~~l~g~L~~~I~~d~s~ 79 (144)
|.+.+.++.|.+.++++.+.|.|+||..+|.|.|+||+++ ++++|.|.+..+||.|+++|++++++|+|+++|++|+|+
T Consensus 1 ~~~~~~eE~p~~~ng~~~~~y~W~QtL~EV~i~i~vp~~~~ksk~v~~~Iq~~hI~V~~kg~~~ildG~L~~~vk~des~ 80 (179)
T KOG2265|consen 1 EDEKPKEEKPNSGNGADEEKYTWDQTLEEVEIQIPVPPGTAKSKDVHCSIQSKHIKVGLKGQPPILDGELSHSVKVDEST 80 (179)
T ss_pred CCccccccCCcccCCccccceeeeeehhheEEEeecCCCCcccceEEEEeeeeEEEEecCCCCceecCccccccccccce
Confidence 3466778889999999999999999999999999999999 999999999999999999999889999999999999999
Q ss_pred EEeeCCE-EEEEEEECCCCCCcCcccCCCCCCChhhHHH-H-HHHHHHHHHHHhCcc
Q 032235 80 WTLEDDV-MHITLTKRDKGQTWASPIMGQGQLDPYVTDQ-E-QKRLMLQRFQEEVNY 133 (144)
Q Consensus 80 W~l~~~~-l~I~L~K~~~~~~W~~L~~g~~~id~~~~~e-~-~~~~~~e~~~~~~p~ 133 (144)
|+|++++ +.++|+|.+.+.||.+|++|+++||+...+. . +.+++.+++|+++|+
T Consensus 81 WtiEd~k~i~i~l~K~~~~eWW~~ll~gep~ID~~ki~~e~skl~dldeEtra~vek 137 (179)
T KOG2265|consen 81 WTIEDGKMIVILLKKSNKMEWWDSLLEGEPEIDTKKIEPEESKLSDLDEETRATVEK 137 (179)
T ss_pred EEecCCEEEEEEeeccchHHHHHHHHcCCCCCCccccChhhhhhhhccHHHHHhhhc
Confidence 9999985 7888888887899999999999999875544 3 556777777777664
No 2
>cd06495 p23_NUDCD3_like p23-like NUD (nuclear distribution) C-like domain found in human NUDC domain-containing protein 3 (NUDCD3) and similar proteins. Little is known about the function of the proteins in this subgroup.
Probab=99.95 E-value=1e-27 Score=169.26 Aligned_cols=94 Identities=21% Similarity=0.537 Sum_probs=86.3
Q ss_pred CCcEEEEeeCCEEEEEEECCCC-CCCCceEEEEeccEEEEEecC---CCceecCCCCCCcccCCceEEeeCC-EEEEEEE
Q 032235 18 QTVFEWDQTLDEINIYINLPPN-VHSKQFYCKIQSKHIELGIKG---NPPYLNHELTCPVKTDSSFWTLEDD-VMHITLT 92 (144)
Q Consensus 18 ~~~Y~W~Qt~~~V~V~v~lp~~-~~~kdv~V~~~~~~l~V~v~g---~~~~l~g~L~~~I~~d~s~W~l~~~-~l~I~L~ 92 (144)
.+.|+|+||.++|+|+|++|++ ++++|++|+|++++|+|++++ +.++++|+||++|++|+|+|+++++ .|+|+|.
T Consensus 4 ~e~Y~WtQTl~eV~V~i~lp~~~~~~kdv~v~i~~~~l~v~~~~~~~~~~~i~G~L~~~V~~des~Wtled~~~l~I~L~ 83 (102)
T cd06495 4 RENYTWSQDYTDVEVRVPVPKDVVKGRQVSVDLQSSSIRVSVRDGGGEKVLMEGEFTHKINTENSLWSLEPGKCVLLSLS 83 (102)
T ss_pred CCceEEEeECCeEEEEEECCCCCccceEEEEEEEcCEEEEEEecCCCCceEEeCcccCcccCccceEEEeCCCEEEEEEE
Confidence 4689999999999999999998 579999999999999999974 3479999999999999999999996 5899999
Q ss_pred ECCCCCCcCcccCCCCCCCh
Q 032235 93 KRDKGQTWASPIMGQGQLDP 112 (144)
Q Consensus 93 K~~~~~~W~~L~~g~~~id~ 112 (144)
|.+. .||++|++|+++||.
T Consensus 84 K~~~-~wW~~v~~g~~~iD~ 102 (102)
T cd06495 84 KCSE-VWWNAVLKGEEEIDI 102 (102)
T ss_pred ECCC-cccchhhCCCCcCCC
Confidence 9964 799999999999984
No 3
>cd06492 p23_mNUDC_like p23-like NUD (nuclear distribution) C-like domain of mammalian(m) NUDC and similar proteins. Mammalian(m) NUDC associates both with the dynein complex and also with an anti-inflammatory enzyme, platelet activating factor acetylhydrolase I, PAF-AH(I) complex, through binding mNUDF, the regulatory beta subunit of PAF-AH(I). mNUDC is important for cell proliferation both in normal and tumor tissues. Its expression is elevated in various cell types undergoing mitosis or stimulated to proliferate, with high expression levels observed in leukemic cells and tumors. For a leukemic cell line, human NUDC was shown to activate the thrombopoietin (TPO) receptor (Mpl) by binding to its extracellular domain, and promoting cell proliferation and differentiation.
Probab=99.93 E-value=4.8e-26 Score=156.33 Aligned_cols=84 Identities=33% Similarity=0.682 Sum_probs=79.5
Q ss_pred EEEEeeCCEEEEEEECCCC--CCCCceEEEEeccEEEEEecCCCceecCCCCCCcccCCceEEeeCC-EEEEEEEECCCC
Q 032235 21 FEWDQTLDEINIYINLPPN--VHSKQFYCKIQSKHIELGIKGNPPYLNHELTCPVKTDSSFWTLEDD-VMHITLTKRDKG 97 (144)
Q Consensus 21 Y~W~Qt~~~V~V~v~lp~~--~~~kdv~V~~~~~~l~V~v~g~~~~l~g~L~~~I~~d~s~W~l~~~-~l~I~L~K~~~~ 97 (144)
|+|+||.++|+|+|++|.+ ++++|++|++++++|+|+++|++++++|+||++|++|+|+|+++++ .|+|+|.|++++
T Consensus 1 Y~W~QT~~ev~v~v~l~~~~~~~~kdv~v~i~~~~l~v~~~g~~~~i~G~L~~~V~~des~Wtled~~~l~i~L~K~~~~ 80 (87)
T cd06492 1 YRWTQTLSEVELKVPFKVSFRLKGKDVVVDIQRKHLKVGLKGQPPIIDGELYNEVKVEESSWLIEDGKVVTVNLEKINKM 80 (87)
T ss_pred CccEeecCEEEEEEECCCCCCccceEEEEEEecCEEEEEECCCceEEeCcccCcccccccEEEEeCCCEEEEEEEECCCC
Confidence 8999999999999999987 8999999999999999999997679999999999999999999996 699999999888
Q ss_pred CCcCccc
Q 032235 98 QTWASPI 104 (144)
Q Consensus 98 ~~W~~L~ 104 (144)
+||++|+
T Consensus 81 ~wW~~l~ 87 (87)
T cd06492 81 EWWSRLV 87 (87)
T ss_pred ccccccC
Confidence 9999984
No 4
>cd06494 p23_NUDCD2_like p23-like NUD (nuclear distribution) C-like found in human NUDC domain-containing protein 2 (NUDCD2) and similar proteins. Little is known about the function of the proteins in this subgroup.
Probab=99.93 E-value=2.1e-25 Score=155.05 Aligned_cols=86 Identities=38% Similarity=0.657 Sum_probs=80.6
Q ss_pred CCcEEEEeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEecCCCceecCCCCCCcccCCceEEeeCCE-EEEEEEECCC
Q 032235 18 QTVFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNPPYLNHELTCPVKTDSSFWTLEDDV-MHITLTKRDK 96 (144)
Q Consensus 18 ~~~Y~W~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~~~~l~g~L~~~I~~d~s~W~l~~~~-l~I~L~K~~~ 96 (144)
++.|.|+||.++|+|+|++|++++++|++|+|++++|+|.++|+ .+++|+||++|++|+|+|++++++ |+|+|.|.+.
T Consensus 5 ~~~y~W~QT~~eV~v~i~lp~~~~~kdv~V~i~~~~l~V~~~g~-~~l~G~L~~~I~~destWtled~k~l~I~L~K~~~ 83 (93)
T cd06494 5 TPWGCWYQTMDEVFIEVNVPPGTRAKDVKCKLGSRDISLAVKGQ-EVLKGKLFDSVVADECTWTLEDRKLIRIVLTKSNR 83 (93)
T ss_pred CCCcEEEeEcCEEEEEEECCCCCceeeEEEEEEcCEEEEEECCE-EEEcCcccCccCcccCEEEEECCcEEEEEEEeCCC
Confidence 57999999999999999999999999999999999999999986 599999999999999999999998 7999999964
Q ss_pred --CCCcCccc
Q 032235 97 --GQTWASPI 104 (144)
Q Consensus 97 --~~~W~~L~ 104 (144)
|++|++|+
T Consensus 84 ~~~~~W~sl~ 93 (93)
T cd06494 84 DAGNCWKSLL 93 (93)
T ss_pred CCCccccccC
Confidence 46999985
No 5
>cd06493 p23_NUDCD1_like p23_NUDCD1: p23-like NUD (nuclear distribution) C-like domain found in human NUD (nuclear distribution) C domain-containing protein 1, NUDCD1 (also known as CML66), and similar proteins. NUDCD1/CML66 is a broadly immunogenic tumor associated antigen, which is highly expressed in a variety of solid tumors and in leukemias. In normal tissues high expression of NUDCD1/CML66 is limited to testis and heart.
Probab=99.93 E-value=3e-25 Score=151.10 Aligned_cols=84 Identities=26% Similarity=0.648 Sum_probs=79.0
Q ss_pred EEEEeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEecCCCceecCCCCCCcccCCceEEeeCC-EEEEEEEECCCCCC
Q 032235 21 FEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNPPYLNHELTCPVKTDSSFWTLEDD-VMHITLTKRDKGQT 99 (144)
Q Consensus 21 Y~W~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~~~~l~g~L~~~I~~d~s~W~l~~~-~l~I~L~K~~~~~~ 99 (144)
|.|+||.++|+|+|++|++++++|++|+|++++|.|.+++++++++|+||++|++|+|+|+++++ +|+|+|.|+++|.+
T Consensus 1 Y~W~Qt~~~V~v~i~~p~~~~~~dv~v~~~~~~l~v~~~~~~~~~~g~L~~~I~~d~Stw~i~~~~~l~i~L~K~~~~~~ 80 (85)
T cd06493 1 YYWQQTEEDLTLTIRLPEDTTKEDIRIKFLPDHISIALKDQAPLLEGKLYSSIDHESSTWIIKENKSLEVSLIKKDEGPT 80 (85)
T ss_pred CccEEeCCEEEEEEECCCCCChhhEEEEEecCEEEEEeCCCCeEEeCcccCcccccCcEEEEeCCCEEEEEEEECCCCcc
Confidence 89999999999999999999999999999999999999866578999999999999999999876 69999999988889
Q ss_pred cCccc
Q 032235 100 WASPI 104 (144)
Q Consensus 100 W~~L~ 104 (144)
|++|+
T Consensus 81 W~~L~ 85 (85)
T cd06493 81 WPELV 85 (85)
T ss_pred ccccC
Confidence 99985
No 6
>cd06467 p23_NUDC_like p23_like domain of NUD (nuclear distribution) C and similar proteins. Aspergillus nidulas (An) NUDC is needed for nuclear movement. AnNUDC is localized at the hyphal cortex, and binds NUDF at spindle pole bodies (SPBs) and in the cytoplasm at different stages in the cell cycle. At the SPBs it is part of the dynein molecular motor/NUDF complex that regulates microtubule dynamics. Mammalian(m) NUDC associates both with the dynein complex and also with an anti-inflammatory enzyme, platelet activating factor acetylhydrolase I, PAF-AH(I) complex, through binding mNUDF, the regulatory beta subunit of PAF-AH(I). mNUDC is important for cell proliferation both in normal and tumor tissues. Its expression is elevated in various cell types undergoing mitosis or stimulated to proliferate, with high expression levels observed in leukemic cells and tumors. For a leukemic cell line, human NUDC was shown to activate the thrombopoietin (TPO) receptor (Mpl) by binding to its ext
Probab=99.90 E-value=5.2e-23 Score=138.81 Aligned_cols=84 Identities=45% Similarity=0.830 Sum_probs=79.5
Q ss_pred EEEEeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEecCCCceecCCCCCCcccCCceEEeeC-CEEEEEEEECCCCCC
Q 032235 21 FEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNPPYLNHELTCPVKTDSSFWTLED-DVMHITLTKRDKGQT 99 (144)
Q Consensus 21 Y~W~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~~~~l~g~L~~~I~~d~s~W~l~~-~~l~I~L~K~~~~~~ 99 (144)
|.|+||.++|+|+|++|++++++|++|++++++|+|++.|+.++++|.||++|++++|+|++++ ++++|+|.|+++|.+
T Consensus 1 y~W~Qt~~~V~i~i~~~~~~~~~dv~v~~~~~~l~v~~~~~~~~l~~~L~~~I~~~~s~w~~~~~~~v~i~L~K~~~~~~ 80 (85)
T cd06467 1 YSWTQTLDEVTVTIPLPEGTKSKDVKVEITPKHLKVGVKGGEPLLDGELYAKVKVDESTWTLEDGKLLEITLEKRNEGEW 80 (85)
T ss_pred CEEEeeCCEEEEEEECCCCCcceeEEEEEEcCEEEEEECCCCceEcCcccCceeEcCCEEEEeCCCEEEEEEEECCCCcc
Confidence 8999999999999999999999999999999999999986557899999999999999999999 899999999987679
Q ss_pred cCccc
Q 032235 100 WASPI 104 (144)
Q Consensus 100 W~~L~ 104 (144)
|++|+
T Consensus 81 W~~L~ 85 (85)
T cd06467 81 WPSLV 85 (85)
T ss_pred ccccC
Confidence 99986
No 7
>cd06465 p23_hB-ind1_like p23_like domain found in human (h) butyrate-induced transcript 1 (B-ind1) and similar proteins. hB-ind1 participates in signaling by the small GTPase Rac1. It binds to Rac1 and enhances different Rac1 effects including activation of nuclear factor (NF) kappaB and activation of c-Jun N-terminal kinase (JNK). hB-ind1 also plays a part in the RNA replication and particle production of Hepatitis C virus (HCV) through its interaction with heat shock protein Hsp90, HCV nonstructural protein 5A (NS5A), and the immunophilin FKBP8. hB-ind1 is upregulated in the outer layer of Chinese hamster V79 cells grown as multicell spheroids, versus in the same cells grown as monolayers. This group includes the Saccharomyces cerevisiae Sba1, a co-chaperone of the Hsp90. Sba1 has been shown to be is required for telomere length maintenance, and may modulate telomerase DNA-binding activity.
Probab=99.85 E-value=7.8e-21 Score=134.40 Aligned_cols=90 Identities=20% Similarity=0.370 Sum_probs=80.4
Q ss_pred CcEEEEeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEecCC----CceecCCCCCCcccCCceEEeeCCEEEEEEEEC
Q 032235 19 TVFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGN----PPYLNHELTCPVKTDSSFWTLEDDVMHITLTKR 94 (144)
Q Consensus 19 ~~Y~W~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~----~~~l~g~L~~~I~~d~s~W~l~~~~l~I~L~K~ 94 (144)
|.|.|+||.++|+|+|++|.. +++.|.|++++|.|++.+. ...++++||++|+|++|+|++.+++|+|+|.|+
T Consensus 1 p~~~W~Qt~~~V~i~i~~~~~---~~~~V~~~~~~l~v~~~~~~~~~~y~~~~~L~~~I~pe~s~~~v~~~kveI~L~K~ 77 (108)
T cd06465 1 PPVLWAQRSDVVYLTIELPDA---KDPKIKLEPTSLSFKAKGGGGGKKYEFDLEFYKEIDPEESKYKVTGRQIEFVLRKK 77 (108)
T ss_pred CceeeeECCCEEEEEEEeCCC---CCcEEEEECCEEEEEEEcCCCCeeEEEEeEhhhhccccccEEEecCCeEEEEEEEC
Confidence 579999999999999999953 8999999999999988642 146899999999999999999999999999999
Q ss_pred CCCCCcCcccCCCCCCC
Q 032235 95 DKGQTWASPIMGQGQLD 111 (144)
Q Consensus 95 ~~~~~W~~L~~g~~~id 111 (144)
+.+.+|++|.+++++++
T Consensus 78 ~~~~~W~~L~~~~~k~~ 94 (108)
T cd06465 78 EAGEYWPRLTKEKGKLP 94 (108)
T ss_pred CCCCCCcccccCCCCCC
Confidence 73469999999998876
No 8
>cd06468 p23_CacyBP p23_like domain found in proteins similar to Calcyclin-Binding Protein(CacyBP)/Siah-1-interacting protein (SIP). CacyBP/SIP interacts with S100A6 (calcyclin), with some other members of the S100 family, with tubulin, and with Siah-1 and Skp-1. The latter two are components of the ubiquitin ligase that regulates beta-catenin degradation. The beta-catenin gene is an oncogene participating in tumorigenesis in many different cancers. Overexpression of CacyBP/SIP, in part through its effect on the expression of beta-catenin, inhibits the proliferation, tumorigenicity, and invasion of gastric cancer cells. CacyBP/SIP is abundant in neurons and neuroblastoma NB2a cells. An extensive re-organization of microtubules accompanies the differentiation of NB2a cells. CacyBP/SIP may contribute to NB2a cell differentiation through binding to and increasing the oligomerization of tubulin. CacyBP/SIP is also implicated in differentiation of erythroid cells, rat neonatal cardiomyocytes
Probab=99.78 E-value=1.9e-18 Score=118.41 Aligned_cols=85 Identities=22% Similarity=0.418 Sum_probs=73.1
Q ss_pred CcEEEEeeCCEEEEEEECCCCCC--CCceEEEEeccEEEEEecC---CCc-eecCCCCCCcccCCceEEeeCCEEEEEEE
Q 032235 19 TVFEWDQTLDEINIYINLPPNVH--SKQFYCKIQSKHIELGIKG---NPP-YLNHELTCPVKTDSSFWTLEDDVMHITLT 92 (144)
Q Consensus 19 ~~Y~W~Qt~~~V~V~v~lp~~~~--~kdv~V~~~~~~l~V~v~g---~~~-~l~g~L~~~I~~d~s~W~l~~~~l~I~L~ 92 (144)
.+|.|+||.++|+|+|.+|.... ++|+.|+|++++|.|.+.+ .+. +..+.||++|+|++|+|++.+++|+|.|.
T Consensus 2 ~~y~W~Qt~~~V~i~i~~~~~~~~~~~~v~v~~~~~~l~v~~~~~~~~~~~~~~~~L~~~I~~e~s~~~~~~~ki~i~L~ 81 (92)
T cd06468 2 TKYAWDQSDKFVKIYITLKGVHQLPKENIQVEFTERSFELKVHDLNGKNYRFTINRLLKKIDPEKSSFKVKTDRIVITLA 81 (92)
T ss_pred ceeeeecCCCEEEEEEEccCCCcCCcccEEEEecCCEEEEEEECCCCcEEEEEehHhhCccCccccEEEEeCCEEEEEEE
Confidence 47999999999999999995543 5999999999999998864 222 34457999999999999999999999999
Q ss_pred ECCCCCCcCccc
Q 032235 93 KRDKGQTWASPI 104 (144)
Q Consensus 93 K~~~~~~W~~L~ 104 (144)
|+++ .+|++|.
T Consensus 82 K~~~-~~W~~L~ 92 (92)
T cd06468 82 KKKE-KKWESLT 92 (92)
T ss_pred eCCC-CccCccC
Confidence 9987 6999983
No 9
>PF04969 CS: CS domain; InterPro: IPR017447 The function of the CS domain is unknown. The CS domain is sometimes found C-terminal to the CHORD domain (IPR007051 from INTERPRO) in metazoan proteins, but occurs separately from the CHORD domain in plants. This association is thought to be indicative of an functional interaction between CS and CHORD domains [].; PDB: 1WGV_A 2KMW_A 2O30_B 1WH0_A 1EJF_A 2RH0_B 1RL1_A 2CR0_A 1WFI_A 2XCM_D ....
Probab=99.78 E-value=2.6e-18 Score=112.90 Aligned_cols=75 Identities=28% Similarity=0.534 Sum_probs=66.3
Q ss_pred CcEEEEeeCCEEEEEEEC-CCCCCCCceEEEEeccEEEEEec-C--CCceecCCCCCCcccCCceEEeeCCEEEEEEEE
Q 032235 19 TVFEWDQTLDEINIYINL-PPNVHSKQFYCKIQSKHIELGIK-G--NPPYLNHELTCPVKTDSSFWTLEDDVMHITLTK 93 (144)
Q Consensus 19 ~~Y~W~Qt~~~V~V~v~l-p~~~~~kdv~V~~~~~~l~V~v~-g--~~~~l~g~L~~~I~~d~s~W~l~~~~l~I~L~K 93 (144)
|+|.|+||.++|+|+|++ |..++++|++|++++++|.|.+. + ...+++++||++|+|++|+|++.+++|+|+|.|
T Consensus 1 ~~y~W~Qt~~~V~v~i~~~~~~~~~~dv~v~~~~~~l~v~~~~~~~~~~~~~~~L~~~I~~~~s~~~~~~~~i~i~L~K 79 (79)
T PF04969_consen 1 PRYDWYQTDDEVTVTIPVKPVDISKEDVKVDFTDTSLSVSIKSGDGKEYLLEGELFGEIDPDESTWKVKDNKIEITLKK 79 (79)
T ss_dssp SSEEEEEESSEEEEEEE-TTTTSSGGGEEEEEETTEEEEEEEETTSCEEEEEEEBSS-BECCCEEEEEETTEEEEEEEB
T ss_pred CCeEEEECCCEEEEEEEEcCCCCChHHeEEEEEeeEEEEEEEccCCceEEEEEEEeeeEcchhcEEEEECCEEEEEEEC
Confidence 689999999999999999 54578999999999999999987 2 234689999999999999999999999999998
No 10
>cd06463 p23_like Proteins containing this p23_like domain include p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1. Both are co-chaperones for the heat shock protein (Hsp) 90. p23 binds Hsp90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis. Both p23 and Sba1p can regulate telomerase activity. This group includes domains similar to the C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1). Sgt1 interacts with multiple protein complexes and has the features of a co-chaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. This group also includes the p23_like domains of
Probab=99.76 E-value=4.9e-18 Score=112.29 Aligned_cols=81 Identities=35% Similarity=0.582 Sum_probs=73.7
Q ss_pred EEeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEecC---CCceecCCCCCCcccCCceEEeeCCEEEEEEEECCCCCC
Q 032235 23 WDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKG---NPPYLNHELTCPVKTDSSFWTLEDDVMHITLTKRDKGQT 99 (144)
Q Consensus 23 W~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g---~~~~l~g~L~~~I~~d~s~W~l~~~~l~I~L~K~~~~~~ 99 (144)
|+|+.++|+|+|++|... ++++.|++++++|.|.+.+ ....+++.|+++|++++|+|++.++.|+|+|.|++++.+
T Consensus 1 W~Q~~~~v~i~v~~~~~~-~~~~~v~~~~~~l~i~~~~~~~~~~~~~~~L~~~I~~~~s~~~~~~~~l~i~L~K~~~~~~ 79 (84)
T cd06463 1 WYQTLDEVTITIPLKDVT-KKDVKVEFTPKSLTVSVKGGGGKEYLLEGELFGPIDPEESKWTVEDRKIEITLKKKEPGEW 79 (84)
T ss_pred CcccccEEEEEEEcCCCC-ccceEEEEecCEEEEEeeCCCCCceEEeeEccCccchhhcEEEEeCCEEEEEEEECCCCCC
Confidence 999999999999999544 8999999999999999874 445689999999999999999999999999999988789
Q ss_pred cCccc
Q 032235 100 WASPI 104 (144)
Q Consensus 100 W~~L~ 104 (144)
|++|+
T Consensus 80 W~~l~ 84 (84)
T cd06463 80 WPRLE 84 (84)
T ss_pred CcccC
Confidence 99984
No 11
>cd06466 p23_CS_SGT1_like p23_like domain similar to the C-terminal CHORD-SGT1 (CS) domain of Sgt1 (suppressor of G2 allele of Skp1). Sgt1 interacts with multiple protein complexes and has the features of a cochaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. ScSgt1 is needed for the G1/S and G2/M cell-cycle transitions, and for assembly of the core kinetochore complex (CBF3) via activation of Ctf13, the F-box protein. Binding of Hsp82 (a yeast Hsp90 homologue) to ScSgt1, promotes the binding of Sgt1 to Skp1 and of Skp1 to Ctf13. Some proteins in this group have an SGT1-specific (SGS) domain at the extreme C-terminus. The ScSgt1-SGS domain binds adenylate cyclase. The hSgt1-SGS domain interacts with some S100 family proteins, and studies sug
Probab=99.72 E-value=1.9e-17 Score=111.01 Aligned_cols=80 Identities=21% Similarity=0.326 Sum_probs=72.6
Q ss_pred EEEeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEecC---CCceecCCCCCCcccCCceEEeeCCEEEEEEEECCCCC
Q 032235 22 EWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKG---NPPYLNHELTCPVKTDSSFWTLEDDVMHITLTKRDKGQ 98 (144)
Q Consensus 22 ~W~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g---~~~~l~g~L~~~I~~d~s~W~l~~~~l~I~L~K~~~~~ 98 (144)
.|+||.++|+|+|++| ++.++++.|.+++++|.|.+.+ ....++++||++|+|++|+|++.+++|+|+|.|+.+ .
T Consensus 1 dW~Qt~~~v~i~v~~~-~~~~~~v~v~~~~~~l~i~~~~~~~~~~~~~~~L~~~I~~~~s~~~~~~~~vei~L~K~~~-~ 78 (84)
T cd06466 1 DWYQTDTSVTVTIYAK-NVDKEDVKVEFNEQSLSVSIILPGGSEYQLELDLFGPIDPEQSKVSVLPTKVEITLKKAEP-G 78 (84)
T ss_pred CccccCCEEEEEEEEC-CCCHHHCEEEEecCEEEEEEECCCCCeEEEecccccccCchhcEEEEeCeEEEEEEEcCCC-C
Confidence 4999999999999988 8889999999999999998763 334589999999999999999999999999999987 5
Q ss_pred CcCcc
Q 032235 99 TWASP 103 (144)
Q Consensus 99 ~W~~L 103 (144)
+|++|
T Consensus 79 ~W~~L 83 (84)
T cd06466 79 SWPSL 83 (84)
T ss_pred CCccC
Confidence 89998
No 12
>cd06469 p23_DYX1C1_like p23_like domain found in proteins similar to dyslexia susceptibility 1 (DYX1) candidate 1 (C1) protein, DYX1C1. The human gene encoding this protein is a positional candidate gene for developmental dyslexia (DD), it is located on 15q21.3 by the DYX1 DD susceptibility locus (15q15-21). Independent association studies have reported conflicting results. However, association of short-term memory, which plays a role in DD, with a variant within the DYX1C1 gene has been reported. Most proteins belonging to this group contain a C-terminal tetratricopeptide repeat (TPR) protein binding region.
Probab=99.71 E-value=4.8e-17 Score=107.92 Aligned_cols=77 Identities=19% Similarity=0.406 Sum_probs=70.5
Q ss_pred EEeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEecCCCceecCCCCCCcccCCceEEeeCCEEEEEEEECCCCCCcCc
Q 032235 23 WDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNPPYLNHELTCPVKTDSSFWTLEDDVMHITLTKRDKGQTWAS 102 (144)
Q Consensus 23 W~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~~~~l~g~L~~~I~~d~s~W~l~~~~l~I~L~K~~~~~~W~~ 102 (144)
|+||.++|+|+|.+| +++++|++|++++++|.|.. .+..+.++|++.|++++|+|++.+++|+|+|.|+++ .+|++
T Consensus 1 W~Qt~~~v~i~i~~p-~v~~~~v~v~~~~~~l~i~~--~~~~~~~~l~~~I~~e~~~~~~~~~~l~i~L~K~~~-~~W~~ 76 (78)
T cd06469 1 WSQTDEDVKISVPLK-GVKTSKVDIFCSDLYLKVNF--PPYLFELDLAAPIDDEKSSAKIGNGVLVFTLVKKEP-GIWEA 76 (78)
T ss_pred CcccCCEEEEEEEeC-CCccccceEEEecCEEEEcC--CCEEEEEeCcccccccccEEEEeCCEEEEEEEeCCC-Ccccc
Confidence 999999999999999 79999999999999888765 435688999999999999999999999999999987 58999
Q ss_pred c
Q 032235 103 P 103 (144)
Q Consensus 103 L 103 (144)
|
T Consensus 77 L 77 (78)
T cd06469 77 L 77 (78)
T ss_pred c
Confidence 8
No 13
>cd00237 p23 p23 binds heat shock protein (Hsp)90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis.
Probab=99.70 E-value=1.9e-16 Score=112.47 Aligned_cols=89 Identities=17% Similarity=0.182 Sum_probs=78.4
Q ss_pred CCcEEEEeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEecC---CCceecCCCCCCcccCCceEEeeCCEEEEEEEEC
Q 032235 18 QTVFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKG---NPPYLNHELTCPVKTDSSFWTLEDDVMHITLTKR 94 (144)
Q Consensus 18 ~~~Y~W~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g---~~~~l~g~L~~~I~~d~s~W~l~~~~l~I~L~K~ 94 (144)
.|.+.|+|+.+.|+|+|.++. .+|++|++++++|++...| ...+++.+||++|+|++|++++.+++|+|.|.|+
T Consensus 1 ~p~v~WaQr~~~V~ltI~v~d---~~d~~v~l~~~~l~f~~~~~~g~~y~~~l~l~~~I~pe~Sk~~v~~r~ve~~L~K~ 77 (106)
T cd00237 1 PAKTLWYDRRDYVFIEFCVED---SKDVKVDFEKSKLTFSCLNGDNVKIYNEIELYDRVDPNDSKHKRTDRSILCCLRKG 77 (106)
T ss_pred CCcceeeECCCEEEEEEEeCC---CCCcEEEEecCEEEEEEECCCCcEEEEEEEeecccCcccCeEEeCCceEEEEEEeC
Confidence 367899999999999999994 7899999999999998753 3345788999999999999999999999999999
Q ss_pred CCCCCcCcccCCCCC
Q 032235 95 DKGQTWASPIMGQGQ 109 (144)
Q Consensus 95 ~~~~~W~~L~~g~~~ 109 (144)
+++.+|++|++...+
T Consensus 78 ~~~~~WprL~k~~~k 92 (106)
T cd00237 78 KEGVAWPRLTKEKAK 92 (106)
T ss_pred CCCCCCchhhcCCCC
Confidence 876689999987654
No 14
>cd06488 p23_melusin_like p23_like domain similar to the C-terminal (tail) domain of vertebrate Melusin and related proteins. Melusin's tail domain interacts with the cytoplasmic domain of beta1-A and beta1-D isoforms of beta1 integrin, it does not bind other integrin beta subunits. Melusin is a muscle-specific protein expressed in skeletal and cardiac muscles but not in smooth muscle or other tissues. It is needed for heart hypertrophy following mechanical overload. The integrin-binding portion of this domain appears to be sequestered in the full length melusin protein, Ca2+ may modulate the protein's conformation exposing this binding site. This group includes Chordc1, also known as Chp-1, which is conserved from vertebrates to humans. Mammalian Chordc1 interacts with the heat shock protein (HSP) Hsp90 and is implicated in circadian and/or homeostatic mechanisms in the brain. The N-terminal portions of proteins belonging to this group contain two cysteine and histidine rich domain (C
Probab=99.67 E-value=3.4e-16 Score=106.95 Aligned_cols=83 Identities=19% Similarity=0.251 Sum_probs=72.4
Q ss_pred cEEEEeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEec---CCCceecCCCCCCcccCCceEEeeCCEEEEEEEECCC
Q 032235 20 VFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIK---GNPPYLNHELTCPVKTDSSFWTLEDDVMHITLTKRDK 96 (144)
Q Consensus 20 ~Y~W~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~---g~~~~l~g~L~~~I~~d~s~W~l~~~~l~I~L~K~~~ 96 (144)
+|.|+||.+.|+|+|.+. ++.++++.|.+++++++|.+. |....+..+||++|+|+.|+|.+.+++|+|.|.|+++
T Consensus 2 R~dW~Qs~~~V~ItI~~k-~~~~~~~~v~~~~~~l~v~~~~~~~~~y~~~l~L~~~I~~~~s~~~v~~~kvei~L~K~~~ 80 (87)
T cd06488 2 RHDWHQTGSHVVVSVYAK-NSNPELSVVEANSTVLTIHIVFEGNKEFQLDIELWGVIDVEKSSVNMLPTKVEIKLRKAEP 80 (87)
T ss_pred CccEeeCCCEEEEEEEEC-cCCccceEEEecCCEEEEEEECCCCceEEEEeeccceEChhHcEEEecCcEEEEEEEeCCC
Confidence 699999999999999875 888999999999999887653 3223477799999999999999999999999999986
Q ss_pred CCCcCccc
Q 032235 97 GQTWASPI 104 (144)
Q Consensus 97 ~~~W~~L~ 104 (144)
+ .|++|.
T Consensus 81 ~-~W~~Le 87 (87)
T cd06488 81 G-SWAKLE 87 (87)
T ss_pred C-cCccCC
Confidence 4 899983
No 15
>cd06489 p23_CS_hSgt1_like p23_like domain similar to the C-terminal CS (CHORD-SGT1) domain of human (h) Sgt1 and related proteins. hSgt1 is a co-chaperone which has been shown to be elevated in HEp-2 cells as a result of stress conditions such as heat shock. It interacts with the heat shock proteins (HSPs) Hsp70 and Hsp90, and it expression pattern is synchronized with these two Hsps. The interaction with HSP90 has been shown to involve the hSgt1_CS domain, and appears to be required for correct kinetochore assembly and efficient cell division. Some proteins in this subgroup contain a tetratricopeptide repeat (TPR) HSP-binding domain N-terminal to this CS domain, and most proteins in this subgroup contain a Sgt1-specific (SGS) domain C-terminal to the CS domain. The SGS domain interacts with some S100 family proteins. Studies suggest that S100A6 modulates in a Ca2+ dependent manner the interactions of hSgt1 with Hsp90 and Hsp70. The yeast Sgt1 CS domain is not found in this subgroup.
Probab=99.67 E-value=2.7e-16 Score=106.28 Aligned_cols=81 Identities=21% Similarity=0.351 Sum_probs=72.2
Q ss_pred EEEeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEecC---CCceecCCCCCCcccCCceEEeeCCEEEEEEEECCCCC
Q 032235 22 EWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKG---NPPYLNHELTCPVKTDSSFWTLEDDVMHITLTKRDKGQ 98 (144)
Q Consensus 22 ~W~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g---~~~~l~g~L~~~I~~d~s~W~l~~~~l~I~L~K~~~~~ 98 (144)
.|+|+.+.|+|+|.++ ++.++++.|++++++++|.+.+ ....++++||++|+|++|+|++.+++|+|.|.|+++ .
T Consensus 1 dW~Q~~~~V~iti~~k-~~~~~~~~v~~~~~~l~~~~~~~~~~~y~~~~~L~~~I~p~~s~~~v~~~kiei~L~K~~~-~ 78 (84)
T cd06489 1 DWYQTESQVVITILIK-NVKPEDVSVEFEKRELSATVKLPSGNDYSLKLHLLHPIVPEQSSYKILSTKIEIKLKKTEA-I 78 (84)
T ss_pred CccccCCEEEEEEEEC-CCCHHHCEEEEeCCEEEEEEECCCCCcEEEeeecCceecchhcEEEEeCcEEEEEEEcCCC-C
Confidence 4999999999999866 8888999999999999998763 334588999999999999999999999999999975 6
Q ss_pred CcCccc
Q 032235 99 TWASPI 104 (144)
Q Consensus 99 ~W~~L~ 104 (144)
+|++|.
T Consensus 79 ~W~~Le 84 (84)
T cd06489 79 RWSKLE 84 (84)
T ss_pred CCccCC
Confidence 899983
No 16
>KOG4379 consensus Uncharacterized conserved protein (tumor antigen CML66 in humans) [Function unknown]
Probab=99.60 E-value=1.8e-15 Score=128.94 Aligned_cols=119 Identities=20% Similarity=0.358 Sum_probs=108.0
Q ss_pred eecCCCCcEEEEeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEecCCCceecCCCCCCcccCCceEEeeC-CEEEEEE
Q 032235 13 FLHNGQTVFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNPPYLNHELTCPVKTDSSFWTLED-DVMHITL 91 (144)
Q Consensus 13 ~~~ng~~~Y~W~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~~~~l~g~L~~~I~~d~s~W~l~~-~~l~I~L 91 (144)
+...|.|.|+|.||.+++.+++.+|...+++++.|.+..+++-+...+. .+|+|+||..|..+.|.|.+.. ++|++.|
T Consensus 284 ~e~~~~p~y~w~qt~d~~~~~~~~p~~~~~~~i~Iq~~~~~v~v~~~dh-~~~~g~lyasv~he~s~~ii~ean~Le~sl 362 (596)
T KOG4379|consen 284 LENGGPPSYSWSQTDDNVLIRFNVPSTASAKEINIQGSKTTVVVKHLDH-VIFDGELYASVGHELSAFIIAEANGLELSL 362 (596)
T ss_pred hhccCCccceeeeccCcceEEEecccccccceEEEEecCceEEEEeeee-EEeccchhhhccccchhhhhhhhccceEEE
Confidence 3445578999999999999999999999999999999999999988765 7999999999999999999987 7999999
Q ss_pred EECCCCCCcCcccCCC--CCC--ChhhHHHHHHHHHHHHHHHhCc
Q 032235 92 TKRDKGQTWASPIMGQ--GQL--DPYVTDQEQKRLMLQRFQEEVN 132 (144)
Q Consensus 92 ~K~~~~~~W~~L~~g~--~~i--d~~~~~e~~~~~~~e~~~~~~p 132 (144)
.|++++..|++|+.+| ++| |.+.++.+++||++-.|..-||
T Consensus 363 ~K~de~~twprL~~~dksGEideDveiCad~aEkLisveyeel~p 407 (596)
T KOG4379|consen 363 TKADEIQTWPRLFAQDKSGEIDEDVEICADVAEKLISVEYEELHP 407 (596)
T ss_pred eecccccccchheeecccccchhhhHHHHHHHHHhhccchhhcCC
Confidence 9998889999999887 577 4567899999999999999888
No 17
>KOG1309 consensus Suppressor of G2 allele of skp1 [Signal transduction mechanisms]
Probab=99.44 E-value=3e-13 Score=103.49 Aligned_cols=88 Identities=23% Similarity=0.301 Sum_probs=76.6
Q ss_pred CCcEEEEeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEec---CCCceecCCCCCCcccCCceEEeeCCEEEEEEEEC
Q 032235 18 QTVFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIK---GNPPYLNHELTCPVKTDSSFWTLEDDVMHITLTKR 94 (144)
Q Consensus 18 ~~~Y~W~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~---g~~~~l~g~L~~~I~~d~s~W~l~~~~l~I~L~K~ 94 (144)
..+|.|+||.++|+|+|.. +++.++||+|.|+.+.|++.++ |....+.+.||++|.|+.|++.+-+.+|+|+|.|.
T Consensus 3 k~r~DwyQt~~~vvIti~~-k~v~~~~v~v~~s~~~l~~~~~~~~g~~~~l~~~L~~~I~pe~~s~k~~stKVEI~L~K~ 81 (196)
T KOG1309|consen 3 KIRHDWYQTETSVVITIFA-KNVPKEDVNVEISENTLSIVIQLPSGSEYNLQLKLYHEIIPEKSSFKVFSTKVEITLAKA 81 (196)
T ss_pred cccceeecCCceEEEEEEe-cCCCccceeEEeecceEEEEEecCCchhhhhhHHhcccccccceeeEeeeeeEEEEeccc
Confidence 3589999999999999965 5899999999999999988766 23344788899999999999999999999999997
Q ss_pred CCCCCcCcccCCC
Q 032235 95 DKGQTWASPIMGQ 107 (144)
Q Consensus 95 ~~~~~W~~L~~g~ 107 (144)
+ +..|.+|.+|.
T Consensus 82 ~-~irW~~Le~g~ 93 (196)
T KOG1309|consen 82 E-IIRWESLEKGK 93 (196)
T ss_pred c-chhhhhhhccc
Confidence 5 58999999664
No 18
>PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional
Probab=99.40 E-value=1.3e-12 Score=109.44 Aligned_cols=88 Identities=18% Similarity=0.238 Sum_probs=76.7
Q ss_pred CCcEEEEeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEec---CCCceecCCCCCCcccCCceEEeeCCEEEEEEEEC
Q 032235 18 QTVFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIK---GNPPYLNHELTCPVKTDSSFWTLEDDVMHITLTKR 94 (144)
Q Consensus 18 ~~~Y~W~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~---g~~~~l~g~L~~~I~~d~s~W~l~~~~l~I~L~K~ 94 (144)
..+|.|+||.+.|+|+|.+. ++.++++.|+|++++|+|.+. |....+...||++|+|+.|++++...+|+|+|.|+
T Consensus 156 ~~r~dWyQs~~~V~i~i~~k-~~~~~~~~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~p~~s~~~v~~~Kiei~l~K~ 234 (356)
T PLN03088 156 KYRHEFYQKPEEVVVTVFAK-GVPAENVNVDFGEQILSVVIEVPGEDAYHLQPRLFGKIIPDKCKYEVLSTKIEIRLAKA 234 (356)
T ss_pred ccccceeecCCEEEEEEEec-CCChHHcEEEeecCEEEEEEecCCCcceeecccccccccccccEEEEecceEEEEEecC
Confidence 36899999999999999876 889999999999999999875 32234778999999999999999999999999999
Q ss_pred CCCCCcCcccCCC
Q 032235 95 DKGQTWASPIMGQ 107 (144)
Q Consensus 95 ~~~~~W~~L~~g~ 107 (144)
++ ..|++|...+
T Consensus 235 ~~-~~W~~L~~~~ 246 (356)
T PLN03088 235 EP-ITWASLEYGK 246 (356)
T ss_pred CC-CCccccccCC
Confidence 76 6899997543
No 19
>cd06490 p23_NCB5OR p23_like domain found in NAD(P)H cytochrome b5 (NCB5) oxidoreductase (OR) and similar proteins. NCB5OR is widely expressed in human organs and tissues and is localized in the ER (endoplasmic reticulum). It appears to play a critical role in maintaining viable pancreatic beta cells. Mice homozygous for a targeted knockout (KO) of the gene encoding NCB5OR develop an early-onset nonautoimmune diabetes phenotype with a non-inflammatory beta-cell deficiency. The role of NCB5OR in beta cells may be in maintaining or regulating their redox status. Proteins in this group in addition contain an N-terminal cytochrome b5 domain and a C-terminal cytochrome b5 oxidoreductase domain. The gene encoding NCB5OR has been considered as a positional candidate for type II diabetes and other diabetes subtypes related to B-cell dysfunction, however variation in its coding region does not appear not to be a major contributor to the pathogenesis of these diseases.
Probab=99.36 E-value=5.7e-12 Score=86.24 Aligned_cols=81 Identities=17% Similarity=0.297 Sum_probs=65.7
Q ss_pred EEEEeeCCEEEEEEECCC-CCCCCceEEEEeccEEEEEec--CCCceecCCCCCCcccCCceEEee--CCEEEEEEEECC
Q 032235 21 FEWDQTLDEINIYINLPP-NVHSKQFYCKIQSKHIELGIK--GNPPYLNHELTCPVKTDSSFWTLE--DDVMHITLTKRD 95 (144)
Q Consensus 21 Y~W~Qt~~~V~V~v~lp~-~~~~kdv~V~~~~~~l~V~v~--g~~~~l~g~L~~~I~~d~s~W~l~--~~~l~I~L~K~~ 95 (144)
|.|+||.+.|+|+|..+. +..+.++.+.+..+++++.+. +....++.+|+++|+++. +.++. .++|+|.|+|++
T Consensus 1 ~DWyQt~~~Vtitiy~K~~~~~~~~v~v~~~~~~l~v~~~~~~~~~~~~~~L~~~I~~~~-~~~~~~~~~KVEI~L~K~e 79 (87)
T cd06490 1 YDWFQTDSEVTIVVYTKSKGNPADIVIVDDQQRELRVEIILGDKSYLLHLDLSNEVQWPC-EVRISTETGKIELVLKKKE 79 (87)
T ss_pred CCceECCCEEEEEEEEcccCCCCccEEEECCCCEEEEEEECCCceEEEeeeccccCCCCc-EEEEcccCceEEEEEEcCC
Confidence 789999999999998764 566777888888888988764 433347778999998654 77887 569999999998
Q ss_pred CCCCcCcc
Q 032235 96 KGQTWASP 103 (144)
Q Consensus 96 ~~~~W~~L 103 (144)
+ ..|++|
T Consensus 80 ~-~~W~~L 86 (87)
T cd06490 80 P-EKWTSL 86 (87)
T ss_pred C-CccccC
Confidence 6 579987
No 20
>cd00298 ACD_sHsps_p23-like This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small heat shock proteins (sHsps) and a similar domain found in p23-like proteins. sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is this ACD. sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. p23 is a cochaperone of the Hsp90 chaperoning pathway. It binds Hsp90 and participates in the folding of a number of Hsp90 clients including the progesterone receptor. p23 also has a passive chaperoning activity. p23 in addition may act as the cytosolic prostaglandin E2 synthase. Included in this family is the p23-like C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1) and the p23-like domains of human butyrate-induced transcript 1 (hB-ind
Probab=99.13 E-value=1.8e-10 Score=73.91 Aligned_cols=70 Identities=29% Similarity=0.405 Sum_probs=62.1
Q ss_pred EEeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEecCC----------CceecCCCCCCcccCCceEEeeCCEEEEEEE
Q 032235 23 WDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGN----------PPYLNHELTCPVKTDSSFWTLEDDVMHITLT 92 (144)
Q Consensus 23 W~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~----------~~~l~g~L~~~I~~d~s~W~l~~~~l~I~L~ 92 (144)
|+|+.+.+.|+|.+| +..++++.|.++++.|.|+.... .......|++.|+++.++|++.++.|.|.|.
T Consensus 1 ~~q~~~~v~i~i~~~-~~~~~~i~v~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~L~~~i~~~~~~~~~~~~~l~i~l~ 79 (80)
T cd00298 1 WYQTDDEVVVTVDLP-GVKKEDIKVEVEDNVLTISGKREEEEERERSYGEFERSFELPEDVDPEKSKASLENGVLEITLP 79 (80)
T ss_pred CEEcCCEEEEEEECC-CCCHHHeEEEEECCEEEEEEEEcCCCcceEeeeeEEEEEECCCCcCHHHCEEEEECCEEEEEEc
Confidence 899999999999999 56799999999999999987632 2347778999999999999999999999998
Q ss_pred E
Q 032235 93 K 93 (144)
Q Consensus 93 K 93 (144)
|
T Consensus 80 K 80 (80)
T cd00298 80 K 80 (80)
T ss_pred C
Confidence 6
No 21
>KOG3158 consensus HSP90 co-chaperone p23 [Posttranslational modification, protein turnover, chaperones]
Probab=99.06 E-value=3.1e-10 Score=86.46 Aligned_cols=90 Identities=13% Similarity=0.235 Sum_probs=76.8
Q ss_pred CCcEEEEeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEecCC-C---ceecCCCCCCcccCCceEEeeCCEEEEEEEE
Q 032235 18 QTVFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGN-P---PYLNHELTCPVKTDSSFWTLEDDVMHITLTK 93 (144)
Q Consensus 18 ~~~Y~W~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~-~---~~l~g~L~~~I~~d~s~W~l~~~~l~I~L~K 93 (144)
.|...|+|+.+-|+++|-|+ .+++++|.+.+..|.++.++. . .+.+.+||+.|+|++|+-+..++.+-..|.|
T Consensus 7 ~p~v~Waqr~~~vyltv~Ve---d~~d~~v~~e~~~l~fs~k~~~d~~~~~~~ief~~eIdpe~sk~k~~~r~if~i~~K 83 (180)
T KOG3158|consen 7 PPEVKWAQRRDLVYLTVCVE---DAKDVHVNLEPSKLTFSCKSGADNHKYENEIEFFDEIDPEKSKHKRTSRSIFCILRK 83 (180)
T ss_pred CCcchhhhhcCeEEEEEEec---cCccceeeccccEEEEEeccCCCceeeEEeeehhhhcCHhhccccccceEEEEEEEc
Confidence 46789999999999999999 688999999999999987742 1 2366899999999999999998778888888
Q ss_pred CCCCCCcCcccCCCCCC
Q 032235 94 RDKGQTWASPIMGQGQL 110 (144)
Q Consensus 94 ~~~~~~W~~L~~g~~~i 110 (144)
++.+.+||+|++...++
T Consensus 84 ~e~~~~WprLtkeK~K~ 100 (180)
T KOG3158|consen 84 KELGEYWPRLTKEKAKL 100 (180)
T ss_pred cccccccchhhhccccc
Confidence 87778999999877644
No 22
>KOG3260 consensus Calcyclin-binding protein CacyBP [Signal transduction mechanisms]
Probab=98.82 E-value=5.8e-09 Score=80.35 Aligned_cols=84 Identities=20% Similarity=0.410 Sum_probs=73.1
Q ss_pred CcEEEEeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEec---CCCc-eecCCCCCCcccCCceEEeeCCEEEEEEEEC
Q 032235 19 TVFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIK---GNPP-YLNHELTCPVKTDSSFWTLEDDVMHITLTKR 94 (144)
Q Consensus 19 ~~Y~W~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~---g~~~-~l~g~L~~~I~~d~s~W~l~~~~l~I~L~K~ 94 (144)
..|.|.|+.+.|.++|.|. |+....|.|.|++.+|.+.++ |... ++-.+|..+|+++.|.-.+..+.+.|+++|.
T Consensus 75 t~ygWDQs~kfVK~yItL~-GV~eenVqv~ftp~Sldl~v~dlqGK~y~~~vnnLlk~I~vEks~~kvKtd~v~I~~kkV 153 (224)
T KOG3260|consen 75 TLYGWDQSNKFVKMYITLE-GVDEENVQVEFTPMSLDLKVHDLQGKNYRMIVNNLLKPISVEKSSKKVKTDTVLILCKKV 153 (224)
T ss_pred hhcCccccCCeeEEEEEee-cccccceeEEecccceeeeeeecCCcceeeehhhhccccChhhcccccccceEEEeehhh
Confidence 3699999999999999987 888999999999999999876 4422 3566899999999999999999999999887
Q ss_pred CCCCCcCccc
Q 032235 95 DKGQTWASPI 104 (144)
Q Consensus 95 ~~~~~W~~L~ 104 (144)
+. ..|+-|.
T Consensus 154 e~-~rwd~Lt 162 (224)
T KOG3260|consen 154 EN-TRWDYLT 162 (224)
T ss_pred hc-ccchHHH
Confidence 64 6898885
No 23
>KOG1667 consensus Zn2+-binding protein Melusin/RAR1, contains CHORD domain [General function prediction only]
Probab=98.64 E-value=9.8e-08 Score=76.99 Aligned_cols=95 Identities=20% Similarity=0.340 Sum_probs=73.6
Q ss_pred cccceecCCC---CcEEEEeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEec---CCCce-ecCCCCCCcccCCceEE
Q 032235 9 KRHRFLHNGQ---TVFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIK---GNPPY-LNHELTCPVKTDSSFWT 81 (144)
Q Consensus 9 ~r~~~~~ng~---~~Y~W~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~---g~~~~-l~g~L~~~I~~d~s~W~ 81 (144)
++|....+.. -+|.|.||...|+|.|+-. +.....-.|+.++..|.|.+. |+..+ ++-+|++-|++++|+-.
T Consensus 202 GeH~w~k~~~V~~cR~Dwhqt~~~Vti~VY~k-~~lpe~s~iean~~~l~V~ivf~~gna~fd~d~kLwgvvnve~s~v~ 280 (320)
T KOG1667|consen 202 GEHKWRKNEIVVKCRHDWHQTNGFVTINVYAK-GALPETSNIEANGTTLHVSIVFGFGNASFDLDYKLWGVVNVEESSVV 280 (320)
T ss_pred cchhhhccCccccchhhhhhcCCeEEEEEEec-cCCcccceeeeCCeEEEEEEEecCCCceeeccceeeeeechhhceEE
Confidence 4555555543 3899999999999999854 433444578888888888654 43233 56689999999999999
Q ss_pred eeCCEEEEEEEECCCCCCcCcccC
Q 032235 82 LEDDVMHITLTKRDKGQTWASPIM 105 (144)
Q Consensus 82 l~~~~l~I~L~K~~~~~~W~~L~~ 105 (144)
+...+|+|+|.|+++| .|++|.-
T Consensus 281 m~~tkVEIsl~k~ep~-sWa~Le~ 303 (320)
T KOG1667|consen 281 MGETKVEISLKKAEPG-SWARLEF 303 (320)
T ss_pred eecceEEEEEeccCCC-CcccccC
Confidence 9999999999999886 6999943
No 24
>COG0071 IbpA Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]
Probab=98.07 E-value=3.8e-05 Score=56.84 Aligned_cols=79 Identities=18% Similarity=0.289 Sum_probs=66.9
Q ss_pred CCCcEEEEeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEecCCC--------c------e--ec--CCCCCCcccCCc
Q 032235 17 GQTVFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNP--------P------Y--LN--HELTCPVKTDSS 78 (144)
Q Consensus 17 g~~~Y~W~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~~--------~------~--l~--g~L~~~I~~d~s 78 (144)
+.|.|...++++++.|.+.|| |++++||+|.+.++.|.|+..-.. . + |. -.|...|+++..
T Consensus 39 ~~P~vdi~e~~~~~~I~~elP-G~~kedI~I~~~~~~l~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~Lp~~v~~~~~ 117 (146)
T COG0071 39 GTPPVDIEETDDEYRITAELP-GVDKEDIEITVEGNTLTIRGEREEEEEEEEEGYLRRERAYGEFERTFRLPEKVDPEVI 117 (146)
T ss_pred CCCcEEEEEcCCEEEEEEEcC-CCChHHeEEEEECCEEEEEEEecccccccCCceEEEEEEeeeEEEEEECcccccccce
Confidence 578999999999999999999 999999999999999888765210 0 1 22 358899999988
Q ss_pred eEEeeCCEEEEEEEECCC
Q 032235 79 FWTLEDDVMHITLTKRDK 96 (144)
Q Consensus 79 ~W~l~~~~l~I~L~K~~~ 96 (144)
.-++..|.|.|+|.|..+
T Consensus 118 ~A~~~nGvL~I~lpk~~~ 135 (146)
T COG0071 118 KAKYKNGLLTVTLPKAEP 135 (146)
T ss_pred eeEeeCcEEEEEEecccc
Confidence 999999999999999865
No 25
>cd06472 ACD_ScHsp26_like Alpha crystallin domain (ACD) found in Saccharomyces cerevisiae (Sc) small heat shock protein (Hsp)26 and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. ScHsp26 is temperature-regulated, it switches from an inactive to a chaperone-active form upon elevation in temperature. It associates into large 24-mers storage forms which upon heat shock disassociate into dimers. These dimers initiate the interaction with non-native substrate proteins and re-assemble into large globular assemblies having one monomer of substrate bound per dimer. This group also contains Arabidopsis thaliana (Ath) Hsp15.7, a peroxisomal matrix protein which can complement the morphological phenotype of S. cerevisiae mutants deficient in Hsps26. AthHsp15.7 is minimally expressed under normal conditions and is strongly induced by heat and oxidative st
Probab=97.92 E-value=6.1e-05 Score=51.43 Aligned_cols=73 Identities=15% Similarity=0.255 Sum_probs=58.3
Q ss_pred cEEEEeeCCEEEEEEECCCCCCCCceEEEEecc-EEEEEecC--------CCc--------ee--cCCCCCCcccCCceE
Q 032235 20 VFEWDQTLDEINIYINLPPNVHSKQFYCKIQSK-HIELGIKG--------NPP--------YL--NHELTCPVKTDSSFW 80 (144)
Q Consensus 20 ~Y~W~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~-~l~V~v~g--------~~~--------~l--~g~L~~~I~~d~s~W 80 (144)
++.|.+|.+.+.|.+.|| |++++|++|.+.++ .|.|+..- ... -| .-.|...|+++.-+-
T Consensus 1 ~~dv~E~~~~~~i~~~lP-Gv~~edi~i~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~v~~~~i~A 79 (92)
T cd06472 1 RVDWKETPEAHVFKADVP-GVKKEDVKVEVEDGRVLRISGERKKEEEKKGDDWHRVERSSGRFVRRFRLPENADADEVKA 79 (92)
T ss_pred CccEEEcCCeEEEEEECC-CCChHhEEEEEeCCCEEEEEEEecccccccCCCEEEEEEeccEEEEEEECCCCCCHHHCEE
Confidence 367899999999999999 89999999999865 78886531 000 12 225888999999999
Q ss_pred EeeCCEEEEEEEE
Q 032235 81 TLEDDVMHITLTK 93 (144)
Q Consensus 81 ~l~~~~l~I~L~K 93 (144)
++.+|.|.|+|.|
T Consensus 80 ~~~nGvL~I~lPK 92 (92)
T cd06472 80 FLENGVLTVTVPK 92 (92)
T ss_pred EEECCEEEEEecC
Confidence 9999999999976
No 26
>COG5091 SGT1 Suppressor of G2 allele of skp1 and related proteins [General function prediction only]
Probab=97.71 E-value=2.7e-05 Score=63.95 Aligned_cols=85 Identities=15% Similarity=0.165 Sum_probs=70.4
Q ss_pred CcEEEEeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEecC---C-CceecCCCCCCcccCCceEEeeCCEEEEEEEEC
Q 032235 19 TVFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKG---N-PPYLNHELTCPVKTDSSFWTLEDDVMHITLTKR 94 (144)
Q Consensus 19 ~~Y~W~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g---~-~~~l~g~L~~~I~~d~s~W~l~~~~l~I~L~K~ 94 (144)
-+|.|+||...+.|.|.-| .+...+|.+-+.++.|++.++- . ...+...||..|.|+-++..+-+..++++|.|.
T Consensus 177 i~yd~s~Ts~t~~ifiy~~-pv~deqVs~~~e~NTL~I~~q~~~~~~~~~~~~~Ly~ev~P~~~s~k~fsK~~e~~l~KV 255 (368)
T COG5091 177 IAYDFSETSDTAIIFIYRP-PVGDEQVSPVLEGNTLSISYQPRRLRLWNDITISLYKEVYPDIRSIKSFSKRVEVHLRKV 255 (368)
T ss_pred eeeeccccceeEEEEEecC-CCCccccceeecCCcceeeeeccccchHHHhhhhhhhhcCcchhhhhhcchhheehhhhh
Confidence 4799999999999998644 6788899999999999998762 1 123567899999999999998888899999999
Q ss_pred CCCCCcCcccC
Q 032235 95 DKGQTWASPIM 105 (144)
Q Consensus 95 ~~~~~W~~L~~ 105 (144)
+. ..|..|.+
T Consensus 256 ~~-v~W~~l~~ 265 (368)
T COG5091 256 EM-VRWGGLNG 265 (368)
T ss_pred hh-hhhccccc
Confidence 64 78988864
No 27
>PF00011 HSP20: Hsp20/alpha crystallin family This prints entry is a subset of the Pfam entry.; InterPro: IPR002068 Prokaryotic and eukaryotic organisms respond to heat shock or other environmental stress by inducing the synthesis of proteins collectively known as heat-shock proteins (hsp) []. Amongst them is a family of proteins with an average molecular weight of 20 Kd, known as the hsp20 proteins []. These seem to act as chaperones that can protect other proteins against heat-induced denaturation and aggregation. Hsp20 proteins seem to form large heterooligomeric aggregates. Structurally, this family is characterised by the presence of a conserved C-terminal domain of about 100 residues.; PDB: 2BOL_B 3N3E_B 2H50_P 2H53_F 2BYU_L 1GME_D 3VQM_J 3VQK_E 3VQL_A 3AAC_A ....
Probab=97.69 E-value=0.00028 Score=48.46 Aligned_cols=74 Identities=20% Similarity=0.293 Sum_probs=56.3
Q ss_pred EEEeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEecCC------Cc--------eec--CCCCCCcccCCceEEeeCC
Q 032235 22 EWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGN------PP--------YLN--HELTCPVKTDSSFWTLEDD 85 (144)
Q Consensus 22 ~W~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~------~~--------~l~--g~L~~~I~~d~s~W~l~~~ 85 (144)
.|.++.+.+.|.+.+| |+.++|++|.+.++.|.|..... .. -|. -.|...++++.-+.++++|
T Consensus 1 di~e~~~~~~i~~~lp-G~~~edi~I~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~f~r~~~lP~~vd~~~i~a~~~~G 79 (102)
T PF00011_consen 1 DIKEDEDEYIIKVDLP-GFDKEDIKIKVDDNKLVISGKRKEEEEDDRYYRSERRYGSFERSIRLPEDVDPDKIKASYENG 79 (102)
T ss_dssp EEEESSSEEEEEEE-T-TS-GGGEEEEEETTEEEEEEEEEGEECTTCEEEE-S-SEEEEEEEE-STTB-GGG-EEEETTS
T ss_pred CeEECCCEEEEEEECC-CCChHHEEEEEecCccceeceeeeeeeeeeeeecccccceEEEEEcCCCcCCcceEEEEecCC
Confidence 4789999999999999 89999999999999998865421 11 122 3588889999999999999
Q ss_pred EEEEEEEECCC
Q 032235 86 VMHITLTKRDK 96 (144)
Q Consensus 86 ~l~I~L~K~~~ 96 (144)
.|.|++.|...
T Consensus 80 vL~I~~pk~~~ 90 (102)
T PF00011_consen 80 VLTITIPKKEE 90 (102)
T ss_dssp EEEEEEEBSSS
T ss_pred EEEEEEEcccc
Confidence 99999999864
No 28
>cd06471 ACD_LpsHSP_like Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18.5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic me
Probab=97.59 E-value=0.00047 Score=46.90 Aligned_cols=72 Identities=21% Similarity=0.274 Sum_probs=57.1
Q ss_pred cEEEEeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEecCCC---------ce---------ec--CCCCCCcccCCce
Q 032235 20 VFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNP---------PY---------LN--HELTCPVKTDSSF 79 (144)
Q Consensus 20 ~Y~W~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~~---------~~---------l~--g~L~~~I~~d~s~ 79 (144)
+..+.++.+.+.|.+.|| |++++|++|.+.++.|.|+..... .+ |. -.|. .|+++..+
T Consensus 2 ~~di~e~~~~~~i~~~lP-Gv~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lp-~v~~~~i~ 79 (93)
T cd06471 2 KTDIKETDDEYIVEADLP-GFKKEDIKLDYKDGYLTISAKRDESKDEKDKKGNYIRRERYYGSFSRSFYLP-NVDEEEIK 79 (93)
T ss_pred ceeEEEcCCEEEEEEECC-CCCHHHeEEEEECCEEEEEEEEccccccccccCCEEEEeeeccEEEEEEECC-CCCHHHCE
Confidence 467899999999999999 899999999999999999653210 01 11 1354 68888889
Q ss_pred EEeeCCEEEEEEEE
Q 032235 80 WTLEDDVMHITLTK 93 (144)
Q Consensus 80 W~l~~~~l~I~L~K 93 (144)
-++.+|.|.|+|.|
T Consensus 80 A~~~dGvL~I~lPK 93 (93)
T cd06471 80 AKYENGVLKITLPK 93 (93)
T ss_pred EEEECCEEEEEEcC
Confidence 99999999999976
No 29
>cd06464 ACD_sHsps-like Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.
Probab=97.52 E-value=0.00054 Score=45.10 Aligned_cols=70 Identities=20% Similarity=0.245 Sum_probs=57.2
Q ss_pred EEeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEecCC---------------C-ce-ecCCCCCCcccCCceEEeeCC
Q 032235 23 WDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGN---------------P-PY-LNHELTCPVKTDSSFWTLEDD 85 (144)
Q Consensus 23 W~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~---------------~-~~-l~g~L~~~I~~d~s~W~l~~~ 85 (144)
+.++.+.+.|.+.|| ++.+++++|.+.++.|.|..+-. . .+ -.-.|...|+++..+..+.+|
T Consensus 2 i~e~~~~~~i~~~lp-g~~~~~i~V~v~~~~l~I~g~~~~~~~~~~~~~~~~~~~~~f~r~~~LP~~vd~~~i~a~~~~G 80 (88)
T cd06464 2 VYETDDAYVVEADLP-GFKKEDIKVEVEDGVLTISGEREEEEEEEENYLRRERSYGSFSRSFRLPEDVDPDKIKASLENG 80 (88)
T ss_pred cEEcCCEEEEEEECC-CCCHHHeEEEEECCEEEEEEEEecccccCCcEEEEEEeCcEEEEEEECCCCcCHHHcEEEEeCC
Confidence 567889999999999 79999999999999999974411 0 11 223588999999999999999
Q ss_pred EEEEEEEE
Q 032235 86 VMHITLTK 93 (144)
Q Consensus 86 ~l~I~L~K 93 (144)
.|.|++.|
T Consensus 81 ~L~I~~pk 88 (88)
T cd06464 81 VLTITLPK 88 (88)
T ss_pred EEEEEEcC
Confidence 99999875
No 30
>cd06497 ACD_alphaA-crystallin_HspB4 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaA-crystallin (HspB4, 20kDa). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 does not belong to this group. Mutations inHspB4 have been associated with Autosomal Dominant Congenital Cataract (ADCC). The chaperone-like functions of HspB4 are considered important for maintaining lens transparency and preventing cataract.
Probab=97.21 E-value=0.0017 Score=44.12 Aligned_cols=69 Identities=17% Similarity=0.304 Sum_probs=55.9
Q ss_pred EeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEecCC-----Cce----ec--CCCCCCcccCCceEEe-eCCEEEEEE
Q 032235 24 DQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGN-----PPY----LN--HELTCPVKTDSSFWTL-EDDVMHITL 91 (144)
Q Consensus 24 ~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~-----~~~----l~--g~L~~~I~~d~s~W~l-~~~~l~I~L 91 (144)
..+.+.+.|.+.|| |++++||+|++.++.|.|+..-. ..+ |. -.|...|+++.-+-++ .+|.|.|++
T Consensus 6 ~e~~~~~~v~~dlp-G~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~Vd~~~i~A~~~~dGvL~I~~ 84 (86)
T cd06497 6 RSDRDKFTIYLDVK-HFSPEDLTVKVLDDYVEIHGKHSERQDDHGYISREFHRRYRLPSNVDQSAITCSLSADGMLTFSG 84 (86)
T ss_pred EEcCCEEEEEEECC-CCCHHHeEEEEECCEEEEEEEEcceeCCCCEEEEEEEEEEECCCCCChHHeEEEeCCCCEEEEEe
Confidence 45788999999999 99999999999999999875411 112 22 2588899999999999 789999998
Q ss_pred EE
Q 032235 92 TK 93 (144)
Q Consensus 92 ~K 93 (144)
.|
T Consensus 85 PK 86 (86)
T cd06497 85 PK 86 (86)
T ss_pred cC
Confidence 76
No 31
>cd06478 ACD_HspB4-5-6 Alpha-crystallin domain found in alphaA-crystallin (HspB4), alphaB-crystallin (HspB5), and the small heat shock protein (sHsp) HspB6, also known as Hsp20. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 on the other hand is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. HspB5's functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its ol
Probab=97.15 E-value=0.0021 Score=43.32 Aligned_cols=68 Identities=15% Similarity=0.238 Sum_probs=54.2
Q ss_pred eeCCEEEEEEECCCCCCCCceEEEEeccEEEEEecCC-----Cce----ec--CCCCCCcccCCceEEe-eCCEEEEEEE
Q 032235 25 QTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGN-----PPY----LN--HELTCPVKTDSSFWTL-EDDVMHITLT 92 (144)
Q Consensus 25 Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~-----~~~----l~--g~L~~~I~~d~s~W~l-~~~~l~I~L~ 92 (144)
.+.+.+.|.+.|| |++++||+|++.++.|.|...-. ..+ |. -.|...|+++.-+-++ .+|.|.|++.
T Consensus 4 ~~~~~~~v~~dlp-G~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~dGvL~I~~P 82 (83)
T cd06478 4 LDKDRFSVNLDVK-HFSPEELSVKVLGDFVEIHGKHEERQDEHGFISREFHRRYRLPPGVDPAAITSSLSADGVLTISGP 82 (83)
T ss_pred ecCceEEEEEECC-CCCHHHeEEEEECCEEEEEEEEceEcCCCCEEEEEEEEEEECCCCcChHHeEEEECCCCEEEEEec
Confidence 5778999999999 99999999999999999866421 112 22 2577889999989999 5889999987
Q ss_pred E
Q 032235 93 K 93 (144)
Q Consensus 93 K 93 (144)
|
T Consensus 83 K 83 (83)
T cd06478 83 R 83 (83)
T ss_pred C
Confidence 6
No 32
>cd06470 ACD_IbpA-B_like Alpha-crystallin domain (ACD) found in Escherichia coli inclusion body-associated proteins IbpA and IbpB, and similar proteins. IbpA and IbpB are 16 kDa small heat shock proteins (sHsps). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. IbpA and IbpB are produced during high-level production of various heterologous proteins, specifically human prorenin, renin and bovine insulin-like growth factor 2 (bIGF-2), and are strongly associated with inclusion bodies containing these heterologous proteins. IbpA and IbpB work as an integrated system to stabilize thermally aggregated proteins in a disaggregation competent state. The chaperone activity of IbpB is also significantly elevated as the temperature increases from normal to heat shock. The high temperature results in the disassociation of 2-3-MDa IbpB oligomers into smaller approximately 6
Probab=97.11 E-value=0.0048 Score=41.97 Aligned_cols=70 Identities=16% Similarity=0.290 Sum_probs=51.9
Q ss_pred EEEEee-CCEEEEEEECCCCCCCCceEEEEeccEEEEEecCC------Cce---------ec--CCCCCCcccCCceEEe
Q 032235 21 FEWDQT-LDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGN------PPY---------LN--HELTCPVKTDSSFWTL 82 (144)
Q Consensus 21 Y~W~Qt-~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~------~~~---------l~--g~L~~~I~~d~s~W~l 82 (144)
+.=.++ ++...|.+.|| |++++||+|.+..+.|.|+..-. ..+ |. -.|...|+.+ ...+
T Consensus 3 ~di~e~~~~~~~v~~~lP-G~~kedi~v~~~~~~L~I~g~~~~~~~~~~~~~~~e~~~g~f~R~~~LP~~vd~~--~A~~ 79 (90)
T cd06470 3 YNIEKTGENNYRITLAVA-GFSEDDLEIEVENNQLTVTGKKADEENEEREYLHRGIAKRAFERSFNLADHVKVK--GAEL 79 (90)
T ss_pred eeeEEcCCCeEEEEEECC-CCCHHHeEEEEECCEEEEEEEEcccccCCCcEEEEEEeceEEEEEEECCCCceEC--eeEE
Confidence 334455 48999999999 89999999999999999975310 000 11 2477778775 6789
Q ss_pred eCCEEEEEEEE
Q 032235 83 EDDVMHITLTK 93 (144)
Q Consensus 83 ~~~~l~I~L~K 93 (144)
++|.|.|+|.+
T Consensus 80 ~~GvL~I~l~~ 90 (90)
T cd06470 80 ENGLLTIDLER 90 (90)
T ss_pred eCCEEEEEEEC
Confidence 99999999864
No 33
>cd06498 ACD_alphaB-crystallin_HspB5 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaB-crystallin (HspB5, 20kDa). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. HspB4 does not belong to this group. HspB5 shows increased synthesis in response to stress. HspB5 is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. Its functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its oligomerization and anti-apoptotic activ
Probab=97.09 E-value=0.0025 Score=43.14 Aligned_cols=69 Identities=13% Similarity=0.239 Sum_probs=55.4
Q ss_pred eeCCEEEEEEECCCCCCCCceEEEEeccEEEEEecCC-----Cce----ec--CCCCCCcccCCceEEee-CCEEEEEEE
Q 032235 25 QTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGN-----PPY----LN--HELTCPVKTDSSFWTLE-DDVMHITLT 92 (144)
Q Consensus 25 Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~-----~~~----l~--g~L~~~I~~d~s~W~l~-~~~l~I~L~ 92 (144)
-+.+...|.+.+| |++++||+|++.++.|.|...-+ ..+ |. -.|...|+++.-+-++. +|.|.|+|.
T Consensus 4 ~~~~~~~v~~dlp-G~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~~~dGvL~I~lP 82 (84)
T cd06498 4 LEKDKFSVNLDVK-HFSPEELKVKVLGDFIEIHGKHEERQDEHGFISREFQRKYRIPADVDPLTITSSLSPDGVLTVCGP 82 (84)
T ss_pred eCCceEEEEEECC-CCCHHHeEEEEECCEEEEEEEEcceeCCCCEEEEEEEEEEECCCCCChHHcEEEeCCCCEEEEEEe
Confidence 3578899999998 99999999999999999976421 112 22 25888999999999995 899999998
Q ss_pred EC
Q 032235 93 KR 94 (144)
Q Consensus 93 K~ 94 (144)
|.
T Consensus 83 k~ 84 (84)
T cd06498 83 RK 84 (84)
T ss_pred CC
Confidence 74
No 34
>PF08190 PIH1: pre-RNA processing PIH1/Nop17
Probab=97.00 E-value=0.0095 Score=48.77 Aligned_cols=68 Identities=18% Similarity=0.263 Sum_probs=57.8
Q ss_pred eeCCEEEEEEECCCCCCCCceEEEEeccEEEEEecCCCceecCCCCCCcccCCceEEeeC--CEEEEEEE
Q 032235 25 QTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNPPYLNHELTCPVKTDSSFWTLED--DVMHITLT 92 (144)
Q Consensus 25 Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~~~~l~g~L~~~I~~d~s~W~l~~--~~l~I~L~ 92 (144)
...+.+.|.|.||.-.+.+++++++.++.|.|...+..++++..|..+|+.+.+.-.+.. +.|.|+|.
T Consensus 258 ~~p~~lvv~i~LP~~~s~~~i~LdV~~~~l~l~~~~~~y~L~l~LP~~V~~~~~~Akf~~~~~~L~vtlp 327 (328)
T PF08190_consen 258 GSPEELVVEIELPGVESASDIDLDVSEDRLSLSSPKPKYRLDLPLPYPVDEDNGKAKFDKKTKTLTVTLP 327 (328)
T ss_pred CCCceEEEEEECCCcCccceeEEEEeCCEEEEEeCCCceEEEccCCCcccCCCceEEEccCCCEEEEEEE
Confidence 347899999999965599999999999999999887445699999999999998877765 47888874
No 35
>cd06479 ACD_HspB7_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB7, also known as cardiovascular small heat shock protein (cvHsp), and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB7 is a 25-kDa protein, preferentially expressed in heart and skeletal muscle. It binds the cytoskeleton protein alpha-filamin (also known as actin-binding protein 280). The expression of HspB7 is increased during rat muscle aging. Its expression is also modulated in obesity implicating this protein in this and related metabolic disorders. As the human gene encoding HspB7 is mapped to chromosome 1p36.23-p34.3 it is a positional candidate for several dystrophies and myopathies.
Probab=96.99 E-value=0.0037 Score=42.17 Aligned_cols=69 Identities=14% Similarity=0.217 Sum_probs=54.8
Q ss_pred EeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEec--CCC--ce--ec--CCCCCCcccCCceEEe-eCCEEEEEEEE
Q 032235 24 DQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIK--GNP--PY--LN--HELTCPVKTDSSFWTL-EDDVMHITLTK 93 (144)
Q Consensus 24 ~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~--g~~--~~--l~--g~L~~~I~~d~s~W~l-~~~~l~I~L~K 93 (144)
..+.+.+.|.+.|| +++++||+|++..+.|.|+.. ... .+ |. -.|...|+++.-+-++ .+|.|.|++.+
T Consensus 4 ~e~~~~~~v~~dlp-G~~pedi~V~v~~~~L~I~ger~~~~~~~~g~F~R~~~LP~~vd~e~v~A~l~~~GvL~I~~~~ 81 (81)
T cd06479 4 KTLGDTYQFAVDVS-DFSPEDIIVTTSNNQIEVHAEKLASDGTVMNTFTHKCQLPEDVDPTSVSSSLGEDGTLTIKARR 81 (81)
T ss_pred cCcCCeEEEEEECC-CCCHHHeEEEEECCEEEEEEEEeccCCCEEEEEEEEEECCCCcCHHHeEEEecCCCEEEEEecC
Confidence 35788999999999 999999999999999999653 110 11 22 2588999999999998 88999998863
No 36
>cd06475 ACD_HspB1_like Alpha crystallin domain (ACD) found in mammalian small (s)heat shock protein (Hsp)-27 (also denoted HspB1 in human) and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Hsp27 shows enhanced synthesis in response to stress. It is a molecular chaperone which interacts with a large number of different proteins. It is found in many types of human cells including breast, uterus, cervix, platelets and cancer cells. Hsp27 has diverse cellular functions including, chaperoning, regulation of actin polymerization, keratinocyte differentiation, regulation of inflammatory pathways in keratinocytes, and protection from oxidative stress through modulating glutathione levels. It is also a subunit of AUF1-containing protein complexes. It has been linked to several transduction pathways regulating cellular functions including differentiat
Probab=96.99 E-value=0.0049 Score=41.84 Aligned_cols=69 Identities=16% Similarity=0.236 Sum_probs=55.2
Q ss_pred EEEeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEecCCC-----ce----ec--CCCCCCcccCCceEEee-CCEEEE
Q 032235 22 EWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNP-----PY----LN--HELTCPVKTDSSFWTLE-DDVMHI 89 (144)
Q Consensus 22 ~W~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~~-----~~----l~--g~L~~~I~~d~s~W~l~-~~~l~I 89 (144)
....+++.+.|.+.|| |++++|++|++.++.|.|+.+-.. .+ |. -.|...|+++.-+-.+. +|.|.|
T Consensus 4 ~i~e~~~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~f~R~f~LP~~vd~~~v~A~~~~dGvL~I 82 (86)
T cd06475 4 EIRQTADRWKVSLDVN-HFAPEELVVKTKDGVVEITGKHEEKQDEHGFVSRCFTRKYTLPPGVDPTAVTSSLSPDGILTV 82 (86)
T ss_pred eEEEcCCeEEEEEECC-CCCHHHEEEEEECCEEEEEEEECcCcCCCCEEEEEEEEEEECCCCCCHHHcEEEECCCCeEEE
Confidence 4678999999999999 999999999999999999765211 12 22 24778899999899997 888888
Q ss_pred EE
Q 032235 90 TL 91 (144)
Q Consensus 90 ~L 91 (144)
+|
T Consensus 83 ~l 84 (86)
T cd06475 83 EA 84 (86)
T ss_pred Ee
Confidence 76
No 37
>PRK10743 heat shock protein IbpA; Provisional
Probab=96.97 E-value=0.0093 Score=44.05 Aligned_cols=73 Identities=11% Similarity=0.148 Sum_probs=58.4
Q ss_pred CcEEEEe-eCCEEEEEEECCCCCCCCceEEEEeccEEEEEecCC-----Cce-----ecC------CCCCCcccCCceEE
Q 032235 19 TVFEWDQ-TLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGN-----PPY-----LNH------ELTCPVKTDSSFWT 81 (144)
Q Consensus 19 ~~Y~W~Q-t~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~-----~~~-----l~g------~L~~~I~~d~s~W~ 81 (144)
|.+.-.+ +.+.+.|.+.|| |++++||+|.+..+.|.|+..-. ..+ -.| .|...|+++. -+
T Consensus 35 p~~di~ee~~~~~~v~aelP-Gv~kedi~V~v~~~~LtI~ge~~~~~~~~~~~~~Er~~g~F~R~~~LP~~Vd~~~--A~ 111 (137)
T PRK10743 35 PPYNVELVDENHYRIAIAVA-GFAESELEITAQDNLLVVKGAHADEQKERTYLYQGIAERNFERKFQLAENIHVRG--AN 111 (137)
T ss_pred CcEEEEEcCCCEEEEEEECC-CCCHHHeEEEEECCEEEEEEEECccccCCcEEEEEEECCEEEEEEECCCCcccCc--CE
Confidence 7788884 899999999999 99999999999999999975411 011 112 4777888883 78
Q ss_pred eeCCEEEEEEEEC
Q 032235 82 LEDDVMHITLTKR 94 (144)
Q Consensus 82 l~~~~l~I~L~K~ 94 (144)
+++|.|.|+|.|.
T Consensus 112 ~~dGVL~I~lPK~ 124 (137)
T PRK10743 112 LVNGLLYIDLERV 124 (137)
T ss_pred EeCCEEEEEEeCC
Confidence 8899999999996
No 38
>cd06526 metazoan_ACD Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.
Probab=96.78 E-value=0.0042 Score=41.49 Aligned_cols=65 Identities=15% Similarity=0.256 Sum_probs=52.2
Q ss_pred CEEEEEEECCCCCCCCceEEEEeccEEEEEecCCC----------ce-ecCCCCCCcccCCceEEeeC-CEEEEEEEE
Q 032235 28 DEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNP----------PY-LNHELTCPVKTDSSFWTLED-DVMHITLTK 93 (144)
Q Consensus 28 ~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~~----------~~-l~g~L~~~I~~d~s~W~l~~-~~l~I~L~K 93 (144)
+.+.|.+.|| |++++||+|.+.++.|.|...-+. .+ -.-.|...|+++.-+-++.+ |.|.|++.|
T Consensus 7 ~~~~v~~dlp-G~~~edI~v~v~~~~L~I~g~~~~~~~~~~~~~~~f~r~~~LP~~vd~~~i~A~~~~~GvL~I~~Pk 83 (83)
T cd06526 7 EKFQVTLDVK-GFKPEELKVKVSDNKLVVEGKHEEREDEHGYVSREFTRRYQLPEGVDPDSVTSSLSSDGVLTIEAPK 83 (83)
T ss_pred eeEEEEEECC-CCCHHHcEEEEECCEEEEEEEEeeeccCCCEEEEEEEEEEECCCCCChHHeEEEeCCCcEEEEEecC
Confidence 5899999999 899999999999999999765110 11 22358889999998999997 889998875
No 39
>cd06476 ACD_HspB2_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB2/heat shock 27kDa protein 2 and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB2 is preferentially and constitutively expressed in skeletal muscle and heart. HspB2 shows homooligomeric activity and forms aggregates in muscle cytosol. Although its expression is not induced by heat shock, it redistributes to the insoluble fraction in response to heat shock. In the mouse heart, HspB2 plays a role in maintaining energetic balance, by protecting cardiac energetics during ischemia/reperfusion, and allowing for increased work during acute inotropic challenge. hHspB2 [previously also known as myotonic dystrophy protein kinase (DMPK) binding protein (MKBP)] is selectively up-regulated in skeletal muscles from myotonic dystrophy patients.
Probab=96.72 E-value=0.0096 Score=40.22 Aligned_cols=67 Identities=10% Similarity=0.190 Sum_probs=52.5
Q ss_pred eCCEEEEEEECCCCCCCCceEEEEeccEEEEEecCC-----Cce----ec--CCCCCCcccCCceEEee-CCEEEEEEEE
Q 032235 26 TLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGN-----PPY----LN--HELTCPVKTDSSFWTLE-DDVMHITLTK 93 (144)
Q Consensus 26 t~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~-----~~~----l~--g~L~~~I~~d~s~W~l~-~~~l~I~L~K 93 (144)
..+...|.+.|| |.+++||+|++.++.|.|..+-. .-+ |. -.|...|+++.-+-++. +|.|.|+|.|
T Consensus 5 ~~d~y~v~~dlp-G~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~v~A~~~~dGvL~I~~Pr 83 (83)
T cd06476 5 EDDKYQVFLDVC-HFTPDEITVRTVDNLLEVSARHPQRMDRHGFVSREFTRTYILPMDVDPLLVRASLSHDGILCIQAPR 83 (83)
T ss_pred cCCeEEEEEEcC-CCCHHHeEEEEECCEEEEEEEEcceecCCCEEEEEEEEEEECCCCCChhhEEEEecCCCEEEEEecC
Confidence 456788999999 99999999999999999966411 112 22 24788899999999996 8899998864
No 40
>PRK11597 heat shock chaperone IbpB; Provisional
Probab=96.71 E-value=0.012 Score=43.87 Aligned_cols=73 Identities=10% Similarity=0.213 Sum_probs=56.9
Q ss_pred CcEEEEe-eCCEEEEEEECCCCCCCCceEEEEeccEEEEEecCC-----Cce---------ec--CCCCCCcccCCceEE
Q 032235 19 TVFEWDQ-TLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGN-----PPY---------LN--HELTCPVKTDSSFWT 81 (144)
Q Consensus 19 ~~Y~W~Q-t~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~-----~~~---------l~--g~L~~~I~~d~s~W~ 81 (144)
|.+.=.+ +++.+.|.+.|| |++++||+|.+..+.|+|+...+ ..+ |. -.|...|+++ .-+
T Consensus 33 P~vdI~e~~~~~y~v~adlP-Gv~kedi~V~v~~~~LtI~ge~~~~~~~~~~~~~Er~~g~F~R~f~LP~~vd~~--~A~ 109 (142)
T PRK11597 33 PPYNIEKSDDNHYRITLALA-GFRQEDLDIQLEGTRLTVKGTPEQPEKEVKWLHQGLVNQPFSLSFTLAENMEVS--GAT 109 (142)
T ss_pred CcEEEEEcCCCEEEEEEEeC-CCCHHHeEEEEECCEEEEEEEEccccCCCcEEEEEEeCcEEEEEEECCCCcccC--cCE
Confidence 6677776 567999999999 99999999999999999976411 011 11 1366788887 578
Q ss_pred eeCCEEEEEEEEC
Q 032235 82 LEDDVMHITLTKR 94 (144)
Q Consensus 82 l~~~~l~I~L~K~ 94 (144)
+++|.|.|+|.|.
T Consensus 110 ~~nGVL~I~lPK~ 122 (142)
T PRK11597 110 FVNGLLHIDLIRN 122 (142)
T ss_pred EcCCEEEEEEecc
Confidence 8999999999986
No 41
>cd06481 ACD_HspB9_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB9 and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB9 is expressed exclusively in the normal testis and in various tumor samples and is a cancer/testis antigen. hHspB9 interacts with TCTEL1 (T-complex testis expressed protein -1), a subunit of dynein. hHspB9 and TCTEL1 are co-expressed in similar cells within the testis and in tumor cells. Included in this group is Xenopus Hsp30, a developmentally-regulated heat-inducible molecular chaperone.
Probab=96.00 E-value=0.029 Score=38.08 Aligned_cols=65 Identities=11% Similarity=0.242 Sum_probs=50.2
Q ss_pred eCCEEEEEEECCCCCCCCceEEEEeccEEEEEecC---C----Cce------ec--CCCCCCcccCCceEEe-eCCEEEE
Q 032235 26 TLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKG---N----PPY------LN--HELTCPVKTDSSFWTL-EDDVMHI 89 (144)
Q Consensus 26 t~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g---~----~~~------l~--g~L~~~I~~d~s~W~l-~~~~l~I 89 (144)
..+.+.|.+.|| +++++||+|++..+.|.|...- . ..+ |. -.|...|+++.-.-.+ .+|.|.|
T Consensus 5 ~~d~~~v~~dlp-G~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~F~R~~~LP~~Vd~~~i~A~~~~dGvL~I 83 (87)
T cd06481 5 GKEGFSLKLDVR-GFSPEDLSVRVDGRKLVVTGKREKKNEDEKGSFSYEYQEFVREAQLPEHVDPEAVTCSLSPSGHLHI 83 (87)
T ss_pred ccceEEEEEECC-CCChHHeEEEEECCEEEEEEEEeeecccCCCcEEEEeeEEEEEEECCCCcChHHeEEEeCCCceEEE
Confidence 357889999998 9999999999999999996541 0 011 11 2477889999988999 7888888
Q ss_pred EE
Q 032235 90 TL 91 (144)
Q Consensus 90 ~L 91 (144)
++
T Consensus 84 ~~ 85 (87)
T cd06481 84 RA 85 (87)
T ss_pred Ec
Confidence 76
No 42
>cd06477 ACD_HspB3_Like Alpha crystallin domain (ACD) found in mammalian HspB3, also known as heat-shock protein 27-like protein (HSPL27, 17-kDa) and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB3 is expressed in adult skeletal muscle, smooth muscle, and heart, and in several other fetal tissues. In muscle cells HspB3 forms an oligomeric 150 kDa complex with myotonic dystrophy protein kinase-binding protein (MKBP/ HspB2), this complex may comprise one of two independent muscle-cell specific chaperone systems. The expression of HspB3 is induced during muscle differentiation controlled by the myogenic factor MyoD. HspB3 may also interact with Hsp22 (HspB8).
Probab=95.53 E-value=0.1 Score=35.31 Aligned_cols=65 Identities=8% Similarity=0.123 Sum_probs=49.7
Q ss_pred eeCCEEEEEEECCCCCCCCceEEEEeccEEEEEecCC-----Cce----ec--CCCCCCcccCCceEEe-eCCEEEEE
Q 032235 25 QTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGN-----PPY----LN--HELTCPVKTDSSFWTL-EDDVMHIT 90 (144)
Q Consensus 25 Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~-----~~~----l~--g~L~~~I~~d~s~W~l-~~~~l~I~ 90 (144)
.+.+...|.+.|| |.++.||+|++..+.|+|+..-. .-+ |. -.|...|+++.-+-++ ++|.|.|.
T Consensus 4 e~~~~~~v~~dlp-G~~~edI~V~v~~~~L~I~ge~~~~~~~~~~~~r~F~R~~~LP~~Vd~~~v~A~~~~dGvL~I~ 80 (83)
T cd06477 4 EGKPMFQILLDVV-QFRPEDIIIQVFEGWLLIKGQHGVRMDEHGFISRSFTRQYQLPDGVEHKDLSAMLCHDGILVVE 80 (83)
T ss_pred cCCceEEEEEEcC-CCCHHHeEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcchheEEEEEcCCCEEEEE
Confidence 3677899999999 99999999999999999976411 112 22 2478889999888887 67877765
No 43
>cd06482 ACD_HspB10 Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB10, also known as sperm outer dense fiber protein (ODFP), and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB10 occurs exclusively in the axoneme of sperm cells and may have a cytoskeletal role.
Probab=94.88 E-value=0.17 Score=34.54 Aligned_cols=64 Identities=11% Similarity=0.191 Sum_probs=48.4
Q ss_pred eCCEEEEEEECCCCCCCCceEEEEeccEEEEEecCC------C--ce----ec--CCCCCCcccCCceEEeeCC-EEEEE
Q 032235 26 TLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGN------P--PY----LN--HELTCPVKTDSSFWTLEDD-VMHIT 90 (144)
Q Consensus 26 t~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~------~--~~----l~--g~L~~~I~~d~s~W~l~~~-~l~I~ 90 (144)
..+.+.|++.|| |++++||+|++..+.|+|...-+ . .+ |. -.|...|+.+.-+-++.++ .|.|.
T Consensus 6 ~~~~~~v~adlP-G~~kedI~V~v~~~~L~I~ger~~~~e~~~~~er~~g~F~R~f~LP~~Vd~d~i~A~~~~~~~l~i~ 84 (87)
T cd06482 6 DSSNVLASVDVC-GFEPDQVKVKVKDGKVQVSAERENRYDCLGSKKYSYMNICKEFSLPPGVDEKDVTYSYGLGSVVKIE 84 (87)
T ss_pred cCCEEEEEEECC-CCCHHHeEEEEECCEEEEEEEEecccccCCccEEEEEEEEEEEECCCCcChHHcEEEEcCCCEEEEe
Confidence 467899999999 99999999999999999976411 0 11 22 2477788888888888876 56653
No 44
>PF05455 GvpH: GvpH; InterPro: IPR008633 This family consists of archaeal GvpH proteins which are thought to be involved in gas vesicle synthesis [].
Probab=94.71 E-value=0.27 Score=37.94 Aligned_cols=71 Identities=13% Similarity=0.289 Sum_probs=50.2
Q ss_pred EeeCC-EEEEEEECCCCCCCCc-eEEEEec--cEEEEEecCCCceecCCCCCCcccCCceEEeeCCEEEEEEEECCCC
Q 032235 24 DQTLD-EINIYINLPPNVHSKQ-FYCKIQS--KHIELGIKGNPPYLNHELTCPVKTDSSFWTLEDDVMHITLTKRDKG 97 (144)
Q Consensus 24 ~Qt~~-~V~V~v~lp~~~~~kd-v~V~~~~--~~l~V~v~g~~~~l~g~L~~~I~~d~s~W~l~~~~l~I~L~K~~~~ 97 (144)
.+.++ ++.|...|| ++.+.+ ++|.+.. ..|.+.+.+. ++=...|..+ .++-..+++..+.|+|.|.|.++.
T Consensus 97 re~dDge~~VvAdLP-GVs~dd~idV~l~~d~~~L~i~~~~~-~~krv~L~~~-~~e~~~~t~nNgILEIri~~~~~~ 171 (177)
T PF05455_consen 97 RERDDGELVVVADLP-GVSDDDAIDVTLDDDEGALTIRVGEK-YLKRVALPWP-DPEITSATFNNGILEIRIRRTEES 171 (177)
T ss_pred EecCCCcEEEEEeCC-CCCcccceeeEeecCCceEEEecCCc-eEeeEecCCC-ccceeeEEEeCceEEEEEeecCCC
Confidence 34556 799999999 776666 8888874 4555554443 4433466666 566668899989999999998753
No 45
>cd06480 ACD_HspB8_like Alpha-crystallin domain (ACD) found in mammalian 21.6 KDa small heat shock protein (sHsp) HspB8, also denoted as Hsp22 in humans, and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. A chaperone complex formed of HspB8 and Bag3 stimulates degradation of protein complexes by macroautophagy. HspB8 also forms complexes with Hsp27 (HspB1), MKBP (HspB2), HspB3, alphaB-crystallin (HspB5), Hsp20 (HspB6), and cvHsp (HspB7). These latter interactions may depend on phosphorylation of the respective partner sHsp. HspB8 may participate in the regulation of cell proliferation, cardiac hypertrophy, apoptosis, and carcinogenesis. Point mutations in HspB8 have been correlated with the development of several congenital neurological diseases, including Charcot Marie tooth disease and distal motor neuropathy type II.
Probab=89.89 E-value=2.1 Score=29.42 Aligned_cols=64 Identities=14% Similarity=0.239 Sum_probs=45.8
Q ss_pred CCEEEEEEECCCCCCCCceEEEEeccEEEEEec-C----CCceecC------CCCCCcccCCceEEee-CCEEEEEE
Q 032235 27 LDEINIYINLPPNVHSKQFYCKIQSKHIELGIK-G----NPPYLNH------ELTCPVKTDSSFWTLE-DDVMHITL 91 (144)
Q Consensus 27 ~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~-g----~~~~l~g------~L~~~I~~d~s~W~l~-~~~l~I~L 91 (144)
.+.-.|.+.+. +.+++||.|++.++.|.|..+ . +.-++.+ .|...|+++.-+-.+. +|.|.|..
T Consensus 14 ~~~f~v~ldv~-gF~pEDL~Vkv~~~~L~V~Gkh~~~~~e~g~~~r~F~R~~~LP~~Vd~~~v~s~l~~dGvL~Iea 89 (91)
T cd06480 14 SEPWKVCVNVH-SFKPEELTVKTKDGFVEVSGKHEEQQKEGGIVSKNFTKKIQLPPEVDPVTVFASLSPEGLLIIEA 89 (91)
T ss_pred CCcEEEEEEeC-CCCHHHcEEEEECCEEEEEEEECcccCCCCEEEEEEEEEEECCCCCCchhEEEEeCCCCeEEEEc
Confidence 34455677665 899999999999999999654 1 1112222 4788889999888888 67777764
No 46
>COG3354 FlaG Putative archaeal flagellar protein G [Cell motility and secretion]
Probab=71.17 E-value=9.7 Score=28.64 Aligned_cols=70 Identities=17% Similarity=0.154 Sum_probs=47.9
Q ss_pred CCcEEEEeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEecCCCceecCCCCCCcccCCceEEeeCCEE--EEEEEEC
Q 032235 18 QTVFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNPPYLNHELTCPVKTDSSFWTLEDDVM--HITLTKR 94 (144)
Q Consensus 18 ~~~Y~W~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~~~~l~g~L~~~I~~d~s~W~l~~~~l--~I~L~K~ 94 (144)
.+.|..+-.....+++|+ ++.+ ..+-++++++.|-+.|+ +..+.--.-+.++.+.|++.+|.+ ++++--.
T Consensus 60 ~i~~~~~~g~~t~t~yiK---NtG~--~~~~fd~~sitVliDG~--iv~~a~~~~~~~~gs~i~l~PG~Vg~ev~vn~~ 131 (154)
T COG3354 60 QIPYVGTDGPYTYTFYIK---NTGS--DSIAFDNTSITVLIDGN--IVTPAYVTFTSVNGSSIRLSPGQVGREVTVNEA 131 (154)
T ss_pred CCccccCCCceEEEEEEe---cCCC--cccccCCCeEEEEEcCc--EeccceEEEEecCCCeeEecCCceeeEEEeccC
Confidence 456666656667777774 5533 35889999999999985 445544455788999999887632 5555544
No 47
>KOG0710 consensus Molecular chaperone (small heat-shock protein Hsp26/Hsp42) [Posttranslational modification, protein turnover, chaperones]
Probab=64.31 E-value=17 Score=28.13 Aligned_cols=76 Identities=14% Similarity=0.302 Sum_probs=51.5
Q ss_pred cEEE--EeeCCEEEEEEECCCCCCCCceEEEEeccE-EEEEecCCC----------c--------eec--CCCCCCcccC
Q 032235 20 VFEW--DQTLDEINIYINLPPNVHSKQFYCKIQSKH-IELGIKGNP----------P--------YLN--HELTCPVKTD 76 (144)
Q Consensus 20 ~Y~W--~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~-l~V~v~g~~----------~--------~l~--g~L~~~I~~d 76 (144)
+..| .++.+...+.+.+| ++++.+++|++...+ +.++-.... . .|. ..|...++.|
T Consensus 84 ~~~~~v~e~~~~~~~~~~~P-gl~ke~iKv~~~~~~~l~isGe~~~e~e~~~~~~~~~~~E~~~g~F~r~~~lPenv~~d 162 (196)
T KOG0710|consen 84 RVPWDVKESPDAHEFKVDLP-GLKKEDIKVEVEDEKVLTISGERKKEEEESGSGKKWKRVERKLGKFKRRFELPENVDVD 162 (196)
T ss_pred cCCcccccCCCceEEEeeCC-CCCchhceEEeccCcEEEEecccccccccccCCccceeehhcccceEeeecCCccccHH
Confidence 5677 69999999999999 777999999999886 555322100 0 011 1355555555
Q ss_pred CceEEeeCCEEEEEEEECCC
Q 032235 77 SSFWTLEDDVMHITLTKRDK 96 (144)
Q Consensus 77 ~s~W~l~~~~l~I~L~K~~~ 96 (144)
+=.-.+++|.|.|++.|..+
T Consensus 163 ~ikA~~~nGVL~VvvpK~~~ 182 (196)
T KOG0710|consen 163 EIKAEMENGVLTVVVPKLEP 182 (196)
T ss_pred HHHHHhhCCeEEEEEecccc
Confidence 55556666778888888754
No 48
>cd06464 ACD_sHsps-like Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.
Probab=59.64 E-value=29 Score=21.95 Aligned_cols=35 Identities=9% Similarity=0.320 Sum_probs=29.9
Q ss_pred EeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEe
Q 032235 24 DQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGI 58 (144)
Q Consensus 24 ~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v 58 (144)
........-.++||.+++.+.++..+.+.-|.|.+
T Consensus 52 ~~~~~~f~r~~~LP~~vd~~~i~a~~~~G~L~I~~ 86 (88)
T cd06464 52 ERSYGSFSRSFRLPEDVDPDKIKASLENGVLTITL 86 (88)
T ss_pred EEeCcEEEEEEECCCCcCHHHcEEEEeCCEEEEEE
Confidence 34567788889999999999999999999888876
No 49
>KOG3247 consensus Uncharacterized conserved protein [Function unknown]
Probab=57.06 E-value=9.6 Score=33.36 Aligned_cols=83 Identities=14% Similarity=0.199 Sum_probs=57.7
Q ss_pred CCcEEEEeeCCEEEEEEECCCCCCCCceEEEEeccEEEEEecCCCceecCCCCCCcccCCc---eEEeeCCEEEEEEEEC
Q 032235 18 QTVFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNPPYLNHELTCPVKTDSS---FWTLEDDVMHITLTKR 94 (144)
Q Consensus 18 ~~~Y~W~Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~~~~l~g~L~~~I~~d~s---~W~l~~~~l~I~L~K~ 94 (144)
+|+|.=+|.++.+++.|+.| -.+++.+.+....+.+.+.+. +.++...+.+.+..|.. .+-..++.+.|.+.|.
T Consensus 3 tp~f~itqdee~~~L~I~~p-~~~a~~le~~a~~nm~~f~~~--pyflrl~~p~~~~~d~~~n~s~d~kd~~~~vK~~K~ 79 (466)
T KOG3247|consen 3 TPQFAITQDEEFCTLIIPRP-LNQASKLEIDAAANMASFSAG--PYFLRLAGPGMVEDDARPNASYDAKDGYAHVKVPKF 79 (466)
T ss_pred CceeeeeecCceEEEEeecc-ccchhccchhhHhhhhhhccc--hhHHhhcCcchhhhhccccCccccccceeEEeecCC
Confidence 56888899999999999998 455666777777777666653 23455556665555443 2445567889999997
Q ss_pred CCCCCcCcc
Q 032235 95 DKGQTWASP 103 (144)
Q Consensus 95 ~~~~~W~~L 103 (144)
.+++..+.|
T Consensus 80 ~~~e~F~~L 88 (466)
T KOG3247|consen 80 HPGEHFSDL 88 (466)
T ss_pred Cccccccch
Confidence 776555544
No 50
>cd00298 ACD_sHsps_p23-like This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small heat shock proteins (sHsps) and a similar domain found in p23-like proteins. sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is this ACD. sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. p23 is a cochaperone of the Hsp90 chaperoning pathway. It binds Hsp90 and participates in the folding of a number of Hsp90 clients including the progesterone receptor. p23 also has a passive chaperoning activity. p23 in addition may act as the cytosolic prostaglandin E2 synthase. Included in this family is the p23-like C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1) and the p23-like domains of human butyrate-induced transcript 1 (hB-ind
Probab=56.58 E-value=32 Score=20.65 Aligned_cols=32 Identities=16% Similarity=0.338 Sum_probs=26.9
Q ss_pred CCEEEEEEECCCCCCCCceEEEEeccEEEEEe
Q 032235 27 LDEINIYINLPPNVHSKQFYCKIQSKHIELGI 58 (144)
Q Consensus 27 ~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v 58 (144)
.......+.||..+..+.+...+.++.|.|.+
T Consensus 47 ~~~~~~~~~L~~~i~~~~~~~~~~~~~l~i~l 78 (80)
T cd00298 47 YGEFERSFELPEDVDPEKSKASLENGVLEITL 78 (80)
T ss_pred eeeEEEEEECCCCcCHHHCEEEEECCEEEEEE
Confidence 45777888999999888899999998888765
No 51
>KOG3591 consensus Alpha crystallins [Posttranslational modification, protein turnover, chaperones]
Probab=49.44 E-value=1e+02 Score=23.51 Aligned_cols=68 Identities=19% Similarity=0.232 Sum_probs=48.1
Q ss_pred CEEEEEEECCCCCCCCceEEEEeccEEEEEecCC-----Cce----ec--CCCCCCcccCCceEEeeC-CEEEEEEEECC
Q 032235 28 DEINIYINLPPNVHSKQFYCKIQSKHIELGIKGN-----PPY----LN--HELTCPVKTDSSFWTLED-DVMHITLTKRD 95 (144)
Q Consensus 28 ~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~g~-----~~~----l~--g~L~~~I~~d~s~W~l~~-~~l~I~L~K~~ 95 (144)
+...|.+.+. ..++++++|+..++.|.|..+-+ .-+ |. -.|...|+|+.-+-++.. |.|.|.-.|..
T Consensus 72 ~~F~V~lDV~-~F~PeEl~Vk~~~~~l~V~gkHeer~d~~G~v~R~F~R~y~LP~~vdp~~V~S~LS~dGvLtI~ap~~~ 150 (173)
T KOG3591|consen 72 DKFEVNLDVH-QFKPEELKVKTDDNTLEVEGKHEEKEDEHGYVSRSFVRKYLLPEDVDPTSVTSTLSSDGVLTIEAPKPP 150 (173)
T ss_pred CcEEEEEEcc-cCcccceEEEeCCCEEEEEeeeccccCCCCeEEEEEEEEecCCCCCChhheEEeeCCCceEEEEccCCC
Confidence 3445555554 67889999999999888876511 112 22 258999999998888876 57899888874
Q ss_pred C
Q 032235 96 K 96 (144)
Q Consensus 96 ~ 96 (144)
.
T Consensus 151 ~ 151 (173)
T KOG3591|consen 151 P 151 (173)
T ss_pred C
Confidence 3
No 52
>cd06526 metazoan_ACD Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.
Probab=45.92 E-value=47 Score=21.57 Aligned_cols=31 Identities=16% Similarity=0.232 Sum_probs=26.8
Q ss_pred CEEEEEEECCCCCCCCceEEEEec-cEEEEEe
Q 032235 28 DEINIYINLPPNVHSKQFYCKIQS-KHIELGI 58 (144)
Q Consensus 28 ~~V~V~v~lp~~~~~kdv~V~~~~-~~l~V~v 58 (144)
....=+|+||.+++.+.+...+++ .-|.|.+
T Consensus 50 ~~f~r~~~LP~~vd~~~i~A~~~~~GvL~I~~ 81 (83)
T cd06526 50 REFTRRYQLPEGVDPDSVTSSLSSDGVLTIEA 81 (83)
T ss_pred EEEEEEEECCCCCChHHeEEEeCCCcEEEEEe
Confidence 467778999999999999999998 8787765
No 53
>cd06477 ACD_HspB3_Like Alpha crystallin domain (ACD) found in mammalian HspB3, also known as heat-shock protein 27-like protein (HSPL27, 17-kDa) and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB3 is expressed in adult skeletal muscle, smooth muscle, and heart, and in several other fetal tissues. In muscle cells HspB3 forms an oligomeric 150 kDa complex with myotonic dystrophy protein kinase-binding protein (MKBP/ HspB2), this complex may comprise one of two independent muscle-cell specific chaperone systems. The expression of HspB3 is induced during muscle differentiation controlled by the myogenic factor MyoD. HspB3 may also interact with Hsp22 (HspB8).
Probab=45.28 E-value=44 Score=22.31 Aligned_cols=31 Identities=16% Similarity=0.233 Sum_probs=26.0
Q ss_pred EEEEEEECCCCCCCCceEEEE-eccEEEEEec
Q 032235 29 EINIYINLPPNVHSKQFYCKI-QSKHIELGIK 59 (144)
Q Consensus 29 ~V~V~v~lp~~~~~kdv~V~~-~~~~l~V~v~ 59 (144)
...=+|+||.+++...|+-.+ ...-|+|..+
T Consensus 51 ~F~R~~~LP~~Vd~~~v~A~~~~dGvL~I~~~ 82 (83)
T cd06477 51 SFTRQYQLPDGVEHKDLSAMLCHDGILVVETK 82 (83)
T ss_pred EEEEEEECCCCcchheEEEEEcCCCEEEEEec
Confidence 677789999999999999998 6887887654
No 54
>cd06497 ACD_alphaA-crystallin_HspB4 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaA-crystallin (HspB4, 20kDa). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 does not belong to this group. Mutations inHspB4 have been associated with Autosomal Dominant Congenital Cataract (ADCC). The chaperone-like functions of HspB4 are considered important for maintaining lens transparency and preventing cataract.
Probab=45.15 E-value=31 Score=22.96 Aligned_cols=29 Identities=17% Similarity=0.338 Sum_probs=24.7
Q ss_pred EEEEEECCCCCCCCceEEEE-eccEEEEEe
Q 032235 30 INIYINLPPNVHSKQFYCKI-QSKHIELGI 58 (144)
Q Consensus 30 V~V~v~lp~~~~~kdv~V~~-~~~~l~V~v 58 (144)
..=+|.||.+++...++..+ ...-|.|.+
T Consensus 55 f~R~~~LP~~Vd~~~i~A~~~~dGvL~I~~ 84 (86)
T cd06497 55 FHRRYRLPSNVDQSAITCSLSADGMLTFSG 84 (86)
T ss_pred EEEEEECCCCCChHHeEEEeCCCCEEEEEe
Confidence 66679999999999999999 688787765
No 55
>PF00011 HSP20: Hsp20/alpha crystallin family This prints entry is a subset of the Pfam entry.; InterPro: IPR002068 Prokaryotic and eukaryotic organisms respond to heat shock or other environmental stress by inducing the synthesis of proteins collectively known as heat-shock proteins (hsp) []. Amongst them is a family of proteins with an average molecular weight of 20 Kd, known as the hsp20 proteins []. These seem to act as chaperones that can protect other proteins against heat-induced denaturation and aggregation. Hsp20 proteins seem to form large heterooligomeric aggregates. Structurally, this family is characterised by the presence of a conserved C-terminal domain of about 100 residues.; PDB: 2BOL_B 3N3E_B 2H50_P 2H53_F 2BYU_L 1GME_D 3VQM_J 3VQK_E 3VQL_A 3AAC_A ....
Probab=44.88 E-value=68 Score=21.27 Aligned_cols=35 Identities=14% Similarity=0.279 Sum_probs=26.8
Q ss_pred eeCCEEEEEEECCCCCCCCceEEEEeccEEEEEec
Q 032235 25 QTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIK 59 (144)
Q Consensus 25 Qt~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~ 59 (144)
++.....-+++||.++..+.++..+.+.-|.|.+.
T Consensus 52 ~~~~~f~r~~~lP~~vd~~~i~a~~~~GvL~I~~p 86 (102)
T PF00011_consen 52 RRYGSFERSIRLPEDVDPDKIKASYENGVLTITIP 86 (102)
T ss_dssp S-SEEEEEEEE-STTB-GGG-EEEETTSEEEEEEE
T ss_pred cccceEEEEEcCCCcCCcceEEEEecCCEEEEEEE
Confidence 45567778899999999999999999999999875
No 56
>cd06479 ACD_HspB7_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB7, also known as cardiovascular small heat shock protein (cvHsp), and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB7 is a 25-kDa protein, preferentially expressed in heart and skeletal muscle. It binds the cytoskeleton protein alpha-filamin (also known as actin-binding protein 280). The expression of HspB7 is increased during rat muscle aging. Its expression is also modulated in obesity implicating this protein in this and related metabolic disorders. As the human gene encoding HspB7 is mapped to chromosome 1p36.23-p34.3 it is a positional candidate for several dystrophies and myopathies.
Probab=42.95 E-value=36 Score=22.60 Aligned_cols=31 Identities=10% Similarity=0.247 Sum_probs=25.0
Q ss_pred EEEEEEECCCCCCCCceEEEE-eccEEEEEec
Q 032235 29 EINIYINLPPNVHSKQFYCKI-QSKHIELGIK 59 (144)
Q Consensus 29 ~V~V~v~lp~~~~~kdv~V~~-~~~~l~V~v~ 59 (144)
...=++.||.+++...|+..+ ...-|+|.+.
T Consensus 49 ~F~R~~~LP~~vd~e~v~A~l~~~GvL~I~~~ 80 (81)
T cd06479 49 TFTHKCQLPEDVDPTSVSSSLGEDGTLTIKAR 80 (81)
T ss_pred EEEEEEECCCCcCHHHeEEEecCCCEEEEEec
Confidence 344468899999999999998 7888888763
No 57
>cd06498 ACD_alphaB-crystallin_HspB5 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaB-crystallin (HspB5, 20kDa). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. HspB4 does not belong to this group. HspB5 shows increased synthesis in response to stress. HspB5 is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. Its functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its oligomerization and anti-apoptotic activ
Probab=42.29 E-value=34 Score=22.71 Aligned_cols=30 Identities=10% Similarity=0.148 Sum_probs=25.7
Q ss_pred EEEEEEECCCCCCCCceEEEEe-ccEEEEEe
Q 032235 29 EINIYINLPPNVHSKQFYCKIQ-SKHIELGI 58 (144)
Q Consensus 29 ~V~V~v~lp~~~~~kdv~V~~~-~~~l~V~v 58 (144)
+..=+|.||.+++...++..++ ..-|.|.+
T Consensus 51 eF~R~~~LP~~vd~~~i~A~~~~dGvL~I~l 81 (84)
T cd06498 51 EFQRKYRIPADVDPLTITSSLSPDGVLTVCG 81 (84)
T ss_pred EEEEEEECCCCCChHHcEEEeCCCCEEEEEE
Confidence 3666799999999999999996 88888876
No 58
>cd06469 p23_DYX1C1_like p23_like domain found in proteins similar to dyslexia susceptibility 1 (DYX1) candidate 1 (C1) protein, DYX1C1. The human gene encoding this protein is a positional candidate gene for developmental dyslexia (DD), it is located on 15q21.3 by the DYX1 DD susceptibility locus (15q15-21). Independent association studies have reported conflicting results. However, association of short-term memory, which plays a role in DD, with a variant within the DYX1C1 gene has been reported. Most proteins belonging to this group contain a C-terminal tetratricopeptide repeat (TPR) protein binding region.
Probab=41.73 E-value=65 Score=20.19 Aligned_cols=31 Identities=10% Similarity=0.133 Sum_probs=26.4
Q ss_pred EEEEEEECCCCCCCCceEEEEeccEEEEEec
Q 032235 29 EINIYINLPPNVHSKQFYCKIQSKHIELGIK 59 (144)
Q Consensus 29 ~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~ 59 (144)
...+.+.|+..+..++....+.++.|.|.+.
T Consensus 37 ~~~~~~~l~~~I~~e~~~~~~~~~~l~i~L~ 67 (78)
T cd06469 37 PYLFELDLAAPIDDEKSSAKIGNGVLVFTLV 67 (78)
T ss_pred CEEEEEeCcccccccccEEEEeCCEEEEEEE
Confidence 3567789999999999999999999988875
No 59
>cd06472 ACD_ScHsp26_like Alpha crystallin domain (ACD) found in Saccharomyces cerevisiae (Sc) small heat shock protein (Hsp)26 and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. ScHsp26 is temperature-regulated, it switches from an inactive to a chaperone-active form upon elevation in temperature. It associates into large 24-mers storage forms which upon heat shock disassociate into dimers. These dimers initiate the interaction with non-native substrate proteins and re-assemble into large globular assemblies having one monomer of substrate bound per dimer. This group also contains Arabidopsis thaliana (Ath) Hsp15.7, a peroxisomal matrix protein which can complement the morphological phenotype of S. cerevisiae mutants deficient in Hsps26. AthHsp15.7 is minimally expressed under normal conditions and is strongly induced by heat and oxidative st
Probab=37.20 E-value=47 Score=22.00 Aligned_cols=31 Identities=10% Similarity=0.207 Sum_probs=26.7
Q ss_pred CEEEEEEECCCCCCCCceEEEEeccEEEEEe
Q 032235 28 DEINIYINLPPNVHSKQFYCKIQSKHIELGI 58 (144)
Q Consensus 28 ~~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v 58 (144)
....-+|+||.++..+.++..+.+.-|+|.+
T Consensus 60 g~f~r~i~LP~~v~~~~i~A~~~nGvL~I~l 90 (92)
T cd06472 60 GRFVRRFRLPENADADEVKAFLENGVLTVTV 90 (92)
T ss_pred cEEEEEEECCCCCCHHHCEEEEECCEEEEEe
Confidence 4677789999999999999999998888875
No 60
>PF13174 TPR_6: Tetratricopeptide repeat; PDB: 3QKY_A 2XEV_A 3URZ_B 2Q7F_A.
Probab=33.58 E-value=64 Score=16.17 Aligned_cols=19 Identities=16% Similarity=0.137 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHhCccc
Q 032235 116 DQEQKRLMLQRFQEEVNYH 134 (144)
Q Consensus 116 ~e~~~~~~~e~~~~~~p~~ 134 (144)
+-.+.+..++++...+|+|
T Consensus 15 ~~~~A~~~~~~~~~~~P~s 33 (33)
T PF13174_consen 15 DYDEAIEYFQRLIKRYPDS 33 (33)
T ss_dssp HHHHHHHHHHHHHHHSTTS
T ss_pred CHHHHHHHHHHHHHHCcCC
Confidence 3346678899999999986
No 61
>PF13349 DUF4097: Domain of unknown function (DUF4097)
Probab=28.75 E-value=1.2e+02 Score=21.66 Aligned_cols=30 Identities=23% Similarity=0.266 Sum_probs=18.1
Q ss_pred CCEEEEEEECCCCCCCCceEEEEeccEEEE
Q 032235 27 LDEINIYINLPPNVHSKQFYCKIQSKHIEL 56 (144)
Q Consensus 27 ~~~V~V~v~lp~~~~~kdv~V~~~~~~l~V 56 (144)
.....+.|.||++.+-++++++.....+.+
T Consensus 117 ~~~~~i~I~lP~~~~l~~i~i~~~~G~i~i 146 (166)
T PF13349_consen 117 DNKSKITIYLPKDYKLDKIDIKTSSGDITI 146 (166)
T ss_pred CCCcEEEEEECCCCceeEEEEEeccccEEE
Confidence 445556666666655556666666665555
No 62
>COG1470 Predicted membrane protein [Function unknown]
Probab=25.90 E-value=96 Score=27.76 Aligned_cols=25 Identities=12% Similarity=0.345 Sum_probs=18.9
Q ss_pred CCEEEEEEECCCCCCCCceEEEEec
Q 032235 27 LDEINIYINLPPNVHSKQFYCKIQS 51 (144)
Q Consensus 27 ~~~V~V~v~lp~~~~~kdv~V~~~~ 51 (144)
...|.++|.+|+++.+.|..|+|+.
T Consensus 443 ~~tV~ltI~vP~~a~aGdY~i~i~~ 467 (513)
T COG1470 443 SKTVSLTITVPEDAGAGDYRITITA 467 (513)
T ss_pred cceEEEEEEcCCCCCCCcEEEEEEE
Confidence 3567888888888888887777754
No 63
>PF15060 PPDFL: Differentiation and proliferation regulator
Probab=24.23 E-value=32 Score=24.54 Aligned_cols=21 Identities=43% Similarity=0.691 Sum_probs=16.9
Q ss_pred EEEEEECCCCCCcCcccCCCC
Q 032235 88 HITLTKRDKGQTWASPIMGQG 108 (144)
Q Consensus 88 ~I~L~K~~~~~~W~~L~~g~~ 108 (144)
.--|.|+.+|.||.+.|.+..
T Consensus 43 hpGLpkad~g~WW~sfFF~k~ 63 (110)
T PF15060_consen 43 HPGLPKADPGHWWASFFFGKS 63 (110)
T ss_pred CcCccccCCCcceEEeEeccc
Confidence 345889999999998887764
No 64
>PF11069 DUF2870: Protein of unknown function (DUF2870); InterPro: IPR021298 This is a eukaryotic family of proteins with unknown function.
Probab=22.42 E-value=2e+02 Score=20.14 Aligned_cols=37 Identities=24% Similarity=0.504 Sum_probs=22.7
Q ss_pred CEEEEEEEECCCCCCcCcccCCCCCCChhhHHHHHHHHHHHHHHHh
Q 032235 85 DVMHITLTKRDKGQTWASPIMGQGQLDPYVTDQEQKRLMLQRFQEE 130 (144)
Q Consensus 85 ~~l~I~L~K~~~~~~W~~L~~g~~~id~~~~~e~~~~~~~e~~~~~ 130 (144)
.+|.+.|.|...| .|.-.+-..+|.++++|+.-|+++
T Consensus 27 tKiivKl~~~g~g---------~P~REp~isee~qk~mm~~~~rrq 63 (98)
T PF11069_consen 27 TKIIVKLQKRGQG---------PPPREPVISEEEQKAMMAYYYRRQ 63 (98)
T ss_pred eeEEEEeccCCCC---------CCCCCCCCCHHHHHHHHHHHHHHH
Confidence 3789999988544 232333444666777777666553
No 65
>PF10618 Tail_tube: Phage tail tube protein; InterPro: IPR019596 This entry is represented by Bacteriophage Mu, GpM tail tube protein. Bacteriophage Mu has an eicosahedral head and contractile tail. The tail is composed of an outer sheath and an inner tube.
Probab=21.20 E-value=1.5e+02 Score=21.08 Aligned_cols=55 Identities=15% Similarity=0.168 Sum_probs=35.5
Q ss_pred CCCcccccceecCC-CCcEEEEeeCC--EEEEEEECCCCCCCCceEEEEeccEEEEEec
Q 032235 4 KLAPEKRHRFLHNG-QTVFEWDQTLD--EINIYINLPPNVHSKQFYCKIQSKHIELGIK 59 (144)
Q Consensus 4 ~~~~~~r~~~~~ng-~~~Y~W~Qt~~--~V~V~v~lp~~~~~kdv~V~~~~~~l~V~v~ 59 (144)
++.|.+-.+...-| ...+.++|+.. .|.++|..+++++-+++. .+++-.|.+...
T Consensus 25 ~~~~gg~~Re~~~G~~~v~G~sE~~~~~~i~~ti~~~~~~~~~~i~-~~~~~tvt~e~~ 82 (119)
T PF10618_consen 25 TYNPGGVKRETVVGQDGVHGYSETPKAPFIKCTIRDTKDTDVDDIN-DITDATVTFELD 82 (119)
T ss_pred EECCCCeEEeeeECCCCcccEeccccCcEEEEEEEcCCCCCHHHHh-CCcccEEEEEec
Confidence 45566655665555 33567777776 677777777777766664 566666666655
No 66
>cd01768 RA RA (Ras-associating) ubiquitin domain. The RA (Ras-associating) domain is structurally similar to ubiquitin and is present in one or two copies in a number of signalling molecules that bind and regulate a small GTPase called Ras or the Ras-related GTPases, Ral and Rap. RA-containing proteins include RalGDS, AF6, RIN1, RASSF1, SNX27, CYR1, STE50, and phospholipase C epsilon.
Probab=20.63 E-value=74 Score=20.58 Aligned_cols=24 Identities=21% Similarity=0.217 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHh-Cccceeeeeeee
Q 032235 119 QKRLMLQRFQEE-VNYHWLLFIVLV 142 (144)
Q Consensus 119 ~~~~~~e~~~~~-~p~~~~~~~~~~ 142 (144)
=-+.++++|.-. +|.+|-|+.++.
T Consensus 28 Vi~~~l~k~~l~~~~~~y~L~ev~~ 52 (87)
T cd01768 28 VIQQLLKKFGLDDDPEDYALVEVLG 52 (87)
T ss_pred HHHHHHHHhCCcCCcccEEEEEEEC
Confidence 456778999888 999999998864
Done!