BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032236
MANVESDSTPSVPKKENITPVGSKIAELNESRAELLNRIQGLKQDLQNWRSKLDTQVKIY
RDELTDMKKTLSVEVEQLRSEFQELRSTLQQQQDDVTASLRNLGLQDFSGDDKERKDDPN
INGKDEEVHAIATPVEDNAKADDK

High Scoring Gene Products

Symbol, full name Information P value
AT4G15790 protein from Arabidopsis thaliana 8.0e-37
RUFY3
Uncharacterized protein
protein from Canis lupus familiaris 3.7e-05
AT2G16460 protein from Arabidopsis thaliana 0.00016
zipA
zipper-like domain-containing protein
gene from Dictyostelium discoideum 0.00095

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032236
        (144 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2130719 - symbol:AT4G15790 species:3702 "Arabi...   396  8.0e-37   1
UNIPROTKB|E2R6S6 - symbol:RUFY3 "Uncharacterized protein"...   108  3.7e-05   1
TAIR|locus:2042644 - symbol:AT2G16460 "AT2G16460" species...   102  0.00016   1
DICTYBASE|DDB_G0286985 - symbol:zipA "zipper-like domain-...   103  0.00095   1


>TAIR|locus:2130719 [details] [associations]
            symbol:AT4G15790 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002687 EMBL:AY072116
            EMBL:AY122964 IPI:IPI00544761 RefSeq:NP_567475.5 UniGene:At.33141
            PRIDE:Q8VYF2 EnsemblPlants:AT4G15790.1 GeneID:827259
            KEGG:ath:AT4G15790 TAIR:At4g15790 InParanoid:Q8VYF2 OMA:TPIGSKI
            PhylomeDB:Q8VYF2 ProtClustDB:CLSN2718618 Genevestigator:Q8VYF2
            Uniprot:Q8VYF2
        Length = 147

 Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
 Identities = 83/135 (61%), Positives = 108/135 (80%)

Query:     6 SDSTPSVPKKENITPVGSKIAELNESRAELLNRIQGLKQDLQNWRSKLDTQVKIYRDELT 65
             S S+P+  KK+N  PV SK+ ELNESRAELLNRIQ LKQDLQ+WR KLDTQVK+YR+EL+
Sbjct:    16 SVSSPTATKKDNTNPVDSKLTELNESRAELLNRIQNLKQDLQSWRGKLDTQVKVYREELS 75

Query:    66 DMKKTLSVEVEQLRSEFQELRSTLQQQQDDVTASLRNLGLQDFSGDDKERKDDPNINGKD 125
              +KKTL++EVEQLR EF++L++TL QQQDDV+ASL++LGLQD     KE+ D  +    +
Sbjct:    76 GLKKTLNLEVEQLREEFKDLKTTLNQQQDDVSASLKSLGLQD----SKEQIDKRS-EVTE 130

Query:   126 EEVHAIATPVEDNAK 140
             E+V A++T  +DNAK
Sbjct:   131 EKVEALST--DDNAK 143


>UNIPROTKB|E2R6S6 [details] [associations]
            symbol:RUFY3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0046872 "metal ion binding" evidence=IEA]
            InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 GO:GO:0046872
            Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178
            InterPro:IPR004012 Pfam:PF02759 SMART:SM00593 PROSITE:PS50826
            ProteinModelPortal:E2R6S6 Ensembl:ENSCAFT00000004667 Uniprot:E2R6S6
        Length = 607

 Score = 108 (43.1 bits), Expect = 3.7e-05, P = 3.7e-05
 Identities = 41/129 (31%), Positives = 63/129 (48%)

Query:    26 AELNESRAELLNRIQGLKQDLQNWRSKLDTQVKIYRDELTDMKKTLSVEVEQLRSEFQEL 85
             AE     AEL NR+   KQD  +  + L  +V    +ELT  +  L +E++Q R + QEL
Sbjct:   400 AERGRQSAELDNRL--FKQDFGDKINSLQLEV----EELTRQRHQLELELKQEREKLQEL 453

Query:    86 RSTLQQQQDDVTASLRNL-----GLQDFSGDDKERKDDPNINGK---DEEVHAIATPVED 137
             R+ LQQ++  + +  + L      L+ +  D K +  + N+  K   DE     A   E 
Sbjct:   454 RNDLQQRKSLIPSLRKKLLSFIRRLKQYRQDGKHKIQEENVKLKKPLDESHSTTALKNEG 513

Query:   138 N--AKADDK 144
             N  A A+DK
Sbjct:   514 NKVAAAEDK 522


>TAIR|locus:2042644 [details] [associations]
            symbol:AT2G16460 "AT2G16460" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0005739 "mitochondrion"
            evidence=IDA] [GO:0046872 "metal ion binding" evidence=IDA]
            [GO:0005774 "vacuolar membrane" evidence=IDA] GO:GO:0005739
            GO:GO:0005774 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
            EMBL:AC007047 eggNOG:NOG297085 InterPro:IPR012439
            InterPro:IPR024461 PANTHER:PTHR14360:SF1 Pfam:PF07798
            HOGENOM:HOG000005849 EMBL:AY065418 EMBL:AY084372 EMBL:BT006146
            IPI:IPI00532342 PIR:E84540 RefSeq:NP_565388.1 UniGene:At.28491
            PaxDb:Q9SIV6 PRIDE:Q9SIV6 EnsemblPlants:AT2G16460.1 GeneID:816144
            KEGG:ath:AT2G16460 TAIR:At2g16460 InParanoid:Q9SIV6 OMA:KLRGDID
            PhylomeDB:Q9SIV6 ProtClustDB:CLSN2688168 ArrayExpress:Q9SIV6
            Genevestigator:Q9SIV6 Uniprot:Q9SIV6
        Length = 230

 Score = 102 (41.0 bits), Expect = 0.00016, P = 0.00016
 Identities = 39/146 (26%), Positives = 69/146 (47%)

Query:     1 MANVESDSTPSVPKKENITPVGSKIAE-LNESRAELLNRIQGLKQDLQNWRSKLDTQVKI 59
             +A V S     VP K+    + S I E LN+S   +       K ++Q      D+ +  
Sbjct:    58 LALVRSLEAQGVPSKQ-AEAITSAITEVLNDSLENVSESFVS-KAEMQKIEMIQDSNLSK 115

Query:    60 YRDELTDMKK----TLSVEVEQLRSEFQELRSTLQQQQDDVTASLR-NLGLQDFSGDDK- 113
             ++ E+   ++     L  E E+LR + +++RS L+ + D VTA  R +L L+     D+ 
Sbjct:   116 FKSEVKSSQEHHFTVLQRETEKLRGDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRDEL 175

Query:   114 --ERKDDPNINGK-DEEVHAIATPVE 136
               +  +  N+  K D E+HA+   +E
Sbjct:   176 ANQNTETTNLTNKLDREIHALRAQLE 201


>DICTYBASE|DDB_G0286985 [details] [associations]
            symbol:zipA "zipper-like domain-containing protein"
            species:44689 "Dictyostelium discoideum" [GO:0005615 "extracellular
            space" evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0003674
            "molecular_function" evidence=ND] [GO:0044351 "macropinocytosis"
            evidence=RCA] dictyBase:DDB_G0286985 GO:GO:0005615
            GenomeReviews:CM000153_GR EMBL:AAFI02000093 RefSeq:XP_637450.1
            EnsemblProtists:DDB0191488 GeneID:8625896 KEGG:ddi:DDB_G0286985
            InParanoid:Q54L07 OMA:LQSTKDQ Uniprot:Q54L07
        Length = 1024

 Score = 103 (41.3 bits), Expect = 0.00095, P = 0.00095
 Identities = 34/131 (25%), Positives = 65/131 (49%)

Query:     2 ANVESDSTPSVPKKENITPVGSKIAELNESRAELLNRIQGLKQDLQNWRSKLDTQVKIYR 61
             A +E  S  S  K E +     K  ELN  +   L ++Q   Q+LQN +S+L+ Q +   
Sbjct:   500 ALLEQQSEDSQSKDEKL-----KSVELNLQQT--LQQLQSKDQELQNVKSQLEQQSE--D 550

Query:    62 DELTDMK-KTLSVEVEQLRSEFQELRSTLQQQQDDVTASLRNLGLQDFSGDDKERKDDPN 120
              E  D K K++ + ++Q   + Q+++S L+QQ +   +    L   + +   + +  D  
Sbjct:   551 SESKDQKLKSVELTLQQTLQQLQDVKSQLEQQSEHNESKDEKLKSIELNLQQQLQSKDSE 610

Query:   121 INGKDEEVHAI 131
             ++ KDE++  +
Sbjct:   611 LSSKDEQLKCL 621


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.306   0.125   0.332    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      144       144   0.00091  102 3  11 23  0.44    32
                                                     30  0.48    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  520 (55 KB)
  Total size of DFA:  118 KB (2079 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.51u 0.12s 23.63t   Elapsed:  00:00:02
  Total cpu time:  23.51u 0.12s 23.63t   Elapsed:  00:00:02
  Start:  Fri May 10 22:34:02 2013   End:  Fri May 10 22:34:04 2013

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