BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032244
(144 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SGA6|RS191_ARATH 40S ribosomal protein S19-1 OS=Arabidopsis thaliana GN=RPS19A PE=2
SV=1
Length = 143
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 122/141 (86%), Positives = 130/141 (92%)
Query: 1 METAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAAS 60
M T K VKDVSPH+FVKAYA+HLKRSGKIELPTW DIVKTG LKELAPYDPDWYYIRAAS
Sbjct: 1 MATGKTVKDVSPHDFVKAYASHLKRSGKIELPTWTDIVKTGKLKELAPYDPDWYYIRAAS 60
Query: 61 MARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
MARK+YLRGGLGVG+FRRIYGG KRNGSRPPHF KSSG +ARHIL QL+ NI+ELD+KG
Sbjct: 61 MARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMNIVELDTKG 120
Query: 121 GRRITSSGQRDLDQVAGRIAV 141
GRRITSSGQRDLDQVAGRIAV
Sbjct: 121 GRRITSSGQRDLDQVAGRIAV 141
>sp|Q9FNP8|RS193_ARATH 40S ribosomal protein S19-3 OS=Arabidopsis thaliana GN=RPS19C PE=2
SV=1
Length = 143
Score = 258 bits (659), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 122/140 (87%), Positives = 128/140 (91%)
Query: 1 METAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAAS 60
M T K VKDVSPHEFVKAYAAHLKRSGKIELP W DIVKTG LKELAPYDPDWYYIRAAS
Sbjct: 1 MATGKTVKDVSPHEFVKAYAAHLKRSGKIELPLWTDIVKTGKLKELAPYDPDWYYIRAAS 60
Query: 61 MARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
MARK+YLRGGLGVG+FRRIYGG KRNGSRPPHF KSSG VARHIL QLQ NI++LD+KG
Sbjct: 61 MARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGVARHILQQLQTMNIVDLDTKG 120
Query: 121 GRRITSSGQRDLDQVAGRIA 140
GR+ITSSGQRDLDQVAGRIA
Sbjct: 121 GRKITSSGQRDLDQVAGRIA 140
>sp|Q9LF30|RS192_ARATH 40S ribosomal protein S19-2 OS=Arabidopsis thaliana GN=RPS19B PE=2
SV=1
Length = 143
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 120/140 (85%), Positives = 128/140 (91%)
Query: 1 METAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAAS 60
M T K VKDVSPH+FVKAYA+HLKRSGKIELP W DIVKTG LKELAPYDPDWYYIRAAS
Sbjct: 1 MATGKTVKDVSPHDFVKAYASHLKRSGKIELPLWTDIVKTGRLKELAPYDPDWYYIRAAS 60
Query: 61 MARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
MARKIYLRGGLGVG+FRRIYGG KRNGSRPPHF KSSG +ARHIL QL+ +I+ELD+KG
Sbjct: 61 MARKIYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMSIVELDTKG 120
Query: 121 GRRITSSGQRDLDQVAGRIA 140
GRRITSSGQRDLDQVAGRIA
Sbjct: 121 GRRITSSGQRDLDQVAGRIA 140
>sp|P40978|RS19_ORYSJ 40S ribosomal protein S19 OS=Oryza sativa subsp. japonica GN=RPS19A
PE=3 SV=1
Length = 146
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 102/140 (72%), Positives = 119/140 (85%)
Query: 3 TAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMA 62
TA+ VKDV+PHEFVKAY+AHLKRSGK+ELP W DIVKT KEL PYDPDWYY RAAS+A
Sbjct: 5 TARTVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIA 64
Query: 63 RKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGR 122
RKIYLR G+GVG F++IYGG +RNGSRPPHF KSSG+++R+IL QLQ II++D KGGR
Sbjct: 65 RKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGR 124
Query: 123 RITSSGQRDLDQVAGRIAVV 142
ITS G+RDLDQVAGR+ V
Sbjct: 125 LITSQGRRDLDQVAGRVDVT 144
>sp|Q94613|RS19_MYAAR 40S ribosomal protein S19 OS=Mya arenaria GN=RPS19 PE=2 SV=1
Length = 149
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 76/135 (56%), Positives = 105/135 (77%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
+VKDVS HEF +A+AA LK+SGK+++P W D VKTG KEL+PY+PDWY+IRAAS+ R +
Sbjct: 4 SVKDVSSHEFTRAFAAFLKKSGKMKVPEWTDFVKTGMFKELSPYEPDWYFIRAASICRHL 63
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRIT 125
Y+R G+GSF +IYGG +R G+ P HF K++GS++R +L L+ I+E D GGRR+T
Sbjct: 64 YIRSPAGIGSFEKIYGGRRRRGTAPSHFCKANGSISRRLLQSLEGLKIVEKDPNGGRRLT 123
Query: 126 SSGQRDLDQVAGRIA 140
S G+RDLD++A +IA
Sbjct: 124 SQGRRDLDRIAAQIA 138
>sp|Q8T5Z4|RS19_BRABE 40S ribosomal protein S19 OS=Branchiostoma belcheri GN=RPS19 PE=2
SV=1
Length = 147
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 78/136 (57%), Positives = 104/136 (76%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
VKDV+ EFVKA+AA LK+SGK++LP W D+VKT KELAPYDPDW+Y+RAAS AR +
Sbjct: 6 TVKDVNQQEFVKAFAAFLKKSGKLKLPEWVDLVKTAPHKELAPYDPDWFYLRAASTARHL 65
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRIT 125
Y+RGG+GVG+ +IYGG KR G++P F S V+R +L L+ ++E D+ GGRR+T
Sbjct: 66 YMRGGVGVGAMCKIYGGRKRRGTKPAKFRVCSRGVSRTVLQSLEGIKMVEKDAAGGRRLT 125
Query: 126 SSGQRDLDQVAGRIAV 141
S GQRDLD++AG++A
Sbjct: 126 SQGQRDLDRIAGQVAT 141
>sp|Q9Y0H3|RS19_MYXGL 40S ribosomal protein S19 OS=Myxine glutinosa GN=rps19 PE=2 SV=1
Length = 145
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 77/138 (55%), Positives = 105/138 (76%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
VKDV+ EFVKA AA K+SGK++ P W D VK G KELAP+D DWYYIR AS+AR +
Sbjct: 5 TVKDVNQQEFVKALAAFFKKSGKLKKPDWVDTVKLGKHKELAPFDIDWYYIRTASVARHL 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRIT 125
Y+RGG+GVG+ +IYGG +RNG+RP H+S+ S +VAR +L L+ ++E D GGRR+T
Sbjct: 65 YMRGGVGVGAMTKIYGGRQRNGTRPSHYSRGSRNVARKVLQSLEMLKMVEKDPNGGRRLT 124
Query: 126 SSGQRDLDQVAGRIAVVA 143
S GQRD+D++AG++ V++
Sbjct: 125 SIGQRDMDRIAGQVVVLS 142
>sp|P17074|RS19_RAT 40S ribosomal protein S19 OS=Rattus norvegicus GN=Rps19 PE=2 SV=3
Length = 145
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 78/135 (57%), Positives = 100/135 (74%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
VKDV+ EFV+A AA LK+SGK+++P W D VK KELAPYD +W+Y RAAS AR +
Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHL 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRIT 125
YLRGG GVGS +IYGG +RNG RP HFS+ S SVAR +L L+ ++E D GGR++T
Sbjct: 65 YLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLT 124
Query: 126 SSGQRDLDQVAGRIA 140
GQRDLD++AG++A
Sbjct: 125 PQGQRDLDRIAGQVA 139
>sp|Q9CZX8|RS19_MOUSE 40S ribosomal protein S19 OS=Mus musculus GN=Rps19 PE=1 SV=3
Length = 145
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 78/135 (57%), Positives = 100/135 (74%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
VKDV+ EFV+A AA LK+SGK+++P W D VK KELAPYD +W+Y RAAS AR +
Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHL 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRIT 125
YLRGG GVGS +IYGG +RNG RP HFS+ S SVAR +L L+ ++E D GGR++T
Sbjct: 65 YLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLT 124
Query: 126 SSGQRDLDQVAGRIA 140
GQRDLD++AG++A
Sbjct: 125 PQGQRDLDRIAGQVA 139
>sp|Q5R8M9|RS19_PONAB 40S ribosomal protein S19 OS=Pongo abelii GN=RPS19 PE=2 SV=3
Length = 145
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 77/135 (57%), Positives = 99/135 (73%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
VKDV+ EFV+A AA LK+SGK+++P W D VK KELAPYD +W+Y RAAS AR +
Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHL 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRIT 125
YLRGG GVGS +IYGG +RNG P HFS+ S SVAR +L L+ ++E D GGR++T
Sbjct: 65 YLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLT 124
Query: 126 SSGQRDLDQVAGRIA 140
GQRDLD++AG++A
Sbjct: 125 PQGQRDLDRIAGQVA 139
>sp|P39019|RS19_HUMAN 40S ribosomal protein S19 OS=Homo sapiens GN=RPS19 PE=1 SV=2
Length = 145
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 77/135 (57%), Positives = 99/135 (73%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
VKDV+ EFV+A AA LK+SGK+++P W D VK KELAPYD +W+Y RAAS AR +
Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHL 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRIT 125
YLRGG GVGS +IYGG +RNG P HFS+ S SVAR +L L+ ++E D GGR++T
Sbjct: 65 YLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLT 124
Query: 126 SSGQRDLDQVAGRIA 140
GQRDLD++AG++A
Sbjct: 125 PQGQRDLDRIAGQVA 139
>sp|Q32PD5|RS19_BOVIN 40S ribosomal protein S19 OS=Bos taurus GN=RPS19 PE=2 SV=3
Length = 145
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 77/135 (57%), Positives = 99/135 (73%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
VKDV+ EFV+A AA LK+SGK+++P W D VK KELAPYD +W+Y RAAS AR +
Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHL 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRIT 125
YLRGG GVGS +IYGG +RNG P HFS+ S SVAR +L L+ ++E D GGR++T
Sbjct: 65 YLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLT 124
Query: 126 SSGQRDLDQVAGRIA 140
GQRDLD++AG++A
Sbjct: 125 PQGQRDLDRIAGQVA 139
>sp|Q54X51|RS19_DICDI 40S ribosomal protein S19 OS=Dictyostelium discoideum GN=rps19 PE=3
SV=1
Length = 148
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 103/138 (74%), Gaps = 1/138 (0%)
Query: 3 TAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMA 62
TA +KDV P EF+ YA LK++G++++P WNDI KT T +EL P +PDW Y R A++A
Sbjct: 4 TAVTLKDVCPQEFIATYARFLKKTGRVQIPKWNDIAKTATYRELPPTNPDWIYYRIATLA 63
Query: 63 RKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDS-KGG 121
RK+Y+RGG GV ++RR++GG +RNG RP HF+ +G R+ L QLQ+ +IE D+ KGG
Sbjct: 64 RKVYIRGGDGVATYRRVFGGNRRNGVRPNHFADVNGGNIRYCLKQLQNLKVIETDAVKGG 123
Query: 122 RRITSSGQRDLDQVAGRI 139
R IT++G+RDLD++A +I
Sbjct: 124 RTITATGRRDLDRIAKQI 141
>sp|Q29308|RS19_PIG 40S ribosomal protein S19 (Fragment) OS=Sus scrofa GN=RPS19 PE=2
SV=3
Length = 136
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 76/132 (57%), Positives = 96/132 (72%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
VKDV+ EFV+A AA LK+SGK+++P W D VK KELAPYD +W+Y RAAS AR +
Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAXHKELAPYDENWFYTRAASTARHL 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRIT 125
YLRGG GVGS +IYGG +RNG P HFS+ S SVAR +L L+ ++E D GGR++T
Sbjct: 65 YLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLT 124
Query: 126 SSGQRDLDQVAG 137
GQRDLD++AG
Sbjct: 125 PQGQRDLDRIAG 136
>sp|Q90YQ4|RS19_ICTPU 40S ribosomal protein S19 OS=Ictalurus punctatus GN=rps19 PE=2 SV=1
Length = 147
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/135 (57%), Positives = 98/135 (72%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
VKDV+ EFV+A AA LK+SGK+++P W DIVK KELAP D +W+YIRAAS R +
Sbjct: 7 TVKDVNQQEFVRALAAFLKKSGKLKVPDWVDIVKLAKHKELAPCDDNWFYIRAASTVRHL 66
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRIT 125
YLRGG+GVGS +IYGG KRNG P HFS S +VAR +L L+ ++E D GGRR+T
Sbjct: 67 YLRGGVGVGSMIKIYGGRKRNGVCPSHFSVGSKNVARKVLQALEALKMVEKDPNGGRRLT 126
Query: 126 SSGQRDLDQVAGRIA 140
G RDLD++AG++A
Sbjct: 127 PQGTRDLDRIAGQVA 141
>sp|Q9DFR5|RS19_GILMI 40S ribosomal protein S19 OS=Gillichthys mirabilis GN=rps19 PE=2
SV=1
Length = 147
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 101/138 (73%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
VKDV+ EFV+A AA LK+SGK+++P W D+VK G KELAP D +W+YIRAAS R +
Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPDWVDLVKLGRHKELAPSDENWFYIRAASTVRHL 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRIT 125
YLRGG GVGS +IYGG +RNG P H+S+ S +VAR +L L+ +IE D GGRR+T
Sbjct: 65 YLRGGAGVGSMTKIYGGRQRNGVCPAHYSEGSKNVARKVLQALELLKMIEKDPNGGRRLT 124
Query: 126 SSGQRDLDQVAGRIAVVA 143
+ G RDLD++AG+++ +
Sbjct: 125 AQGTRDLDRIAGQVSAAS 142
>sp|P79016|RS19B_SCHPO 40S ribosomal protein S19-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps19b PE=3 SV=2
Length = 143
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 92/131 (70%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
+VKDV +F+ AYAA LKRSGK+ P W DIVKTGT KELAPYDPDWYY+RAA++AR I
Sbjct: 5 SVKDVDAQQFINAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHI 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRIT 125
YLR +GVG ++YGG G RP H SGSV R ++ L+ ++E GGRRI+
Sbjct: 65 YLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRIS 124
Query: 126 SSGQRDLDQVA 136
GQRDLD++A
Sbjct: 125 QQGQRDLDRIA 135
>sp|P58234|RS19A_SCHPO 40S ribosomal protein S19-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps19a PE=2 SV=1
Length = 144
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 92/131 (70%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
+VKDV +F+ AYAA LKRSGK+ P W DIVKTGT KELAPYDPDWYY+RAA++AR I
Sbjct: 5 SVKDVDAQKFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHI 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRIT 125
YLR +GVG ++YGG G RP H SGSV R ++ L+ ++E GGRRI+
Sbjct: 65 YLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRIS 124
Query: 126 SSGQRDLDQVA 136
GQRDLD++A
Sbjct: 125 QQGQRDLDRIA 135
>sp|Q8ITC3|RS19_ARGIR 40S ribosomal protein S19 OS=Argopecten irradians GN=RPS19 PE=2
SV=1
Length = 144
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 96/134 (71%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
+VKDV H F KA AA LK+SGK+++P W I+K EL+PYD DW+Y RAAS+ R +
Sbjct: 4 SVKDVDSHTFTKALAAFLKKSGKMKIPEWATIIKLSKFNELSPYDEDWFYTRAASICRHL 63
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRIT 125
Y+R GVG+ +IYG KRNG+ P H+ +SSGSVAR +L L+ ++E D+ GGR++T
Sbjct: 64 YIRSPAGVGALTKIYGDRKRNGTVPSHYCRSSGSVARRVLQALETQKLVEKDANGGRKLT 123
Query: 126 SSGQRDLDQVAGRI 139
S GQ+DLD++A ++
Sbjct: 124 SQGQKDLDRIAAQV 137
>sp|P61155|RS19_PAGMA 40S ribosomal protein S19 OS=Pagrus major GN=rps19 PE=2 SV=1
Length = 146
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/135 (54%), Positives = 98/135 (72%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
VKDV+ EFV+A AA LK+SGK+++P W D+VK G KELAP D +W+YIR+AS R +
Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPDWVDLVKLGKHKELAPSDENWFYIRSASTVRHL 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRIT 125
YLRGG GVGS +IYG +RNG P H+S S +VAR +L L+ +IE D GGRR+T
Sbjct: 65 YLRGGAGVGSMTKIYGSRQRNGVCPAHYSVGSKNVARKVLQALELLKMIEKDPNGGRRLT 124
Query: 126 SSGQRDLDQVAGRIA 140
+ G RDLD++AG++A
Sbjct: 125 AQGTRDLDRIAGQVA 139
>sp|P27073|RS19_EMENI 40S ribosomal protein S19 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rps19 PE=3
SV=1
Length = 148
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 70/132 (53%), Positives = 90/132 (68%), Gaps = 1/132 (0%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
V+DV +F+ AYAA LKR GK+ +P W D VKT EL P D DWYY+RAA++AR I
Sbjct: 5 TVRDVDAQKFIVAYAAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWYYVRAAAVARHI 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELD-SKGGRRI 124
YLR +GVG R+++G K GSRP H +SG+V R +L L+ ++E D KGGRRI
Sbjct: 65 YLRKTVGVGRLRKVHGSTKNRGSRPAHHVDASGAVDRKVLQSLEKIGVLEQDEEKGGRRI 124
Query: 125 TSSGQRDLDQVA 136
T SGQRDLD++A
Sbjct: 125 TQSGQRDLDRIA 136
>sp|P39018|RS19A_DROME 40S ribosomal protein S19a OS=Drosophila melanogaster GN=RpS19a
PE=2 SV=3
Length = 156
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 89/134 (66%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
VKD+ H KA A LK++GK+++P DIVKT KELAPYDPDW+Y+R AS+ R +
Sbjct: 5 TVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHL 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRIT 125
Y R GVGS +IYGG KRNG P HF +++ AR L L+ ++E GGR+++
Sbjct: 65 YHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLS 124
Query: 126 SSGQRDLDQVAGRI 139
S GQRDLD++A +I
Sbjct: 125 SIGQRDLDRIANQI 138
>sp|P39698|RS19S_ASCSU 40S ribosomal protein S19S OS=Ascaris suum GN=RPS19S PE=2 SV=1
Length = 150
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 95/140 (67%), Gaps = 1/140 (0%)
Query: 1 METAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAAS 60
M +VKDV HE V+ A LK+SGK+++P W+D+VK G KELAP D DWYY+R AS
Sbjct: 1 MVKQPSVKDVDQHEIVRYIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSDWYYVRTAS 60
Query: 61 MARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
+AR++Y+R GVG+ RR+YGG KR G P HF+++SGSV R L L+ +E G
Sbjct: 61 VARRLYIRSPTGVGALRRVYGGNKRRGVTPNHFARASGSVIRKALQTLEAIKWVEKHPDG 120
Query: 121 -GRRITSSGQRDLDQVAGRI 139
GR +T G++DLD++A ++
Sbjct: 121 NGRILTKQGRKDLDRIASQM 140
>sp|O15631|RS19_ENTHI 40S ribosomal protein S19 OS=Entamoeba histolytica GN=RPS19 PE=2
SV=1
Length = 148
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 67/139 (48%), Positives = 91/139 (65%), Gaps = 1/139 (0%)
Query: 1 METAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAAS 60
M N+KDV +F+KAYA HLK+SGK+E+P W D VKTG KELAP +PDW YIRAA+
Sbjct: 1 MHHFSNIKDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNPDWIYIRAAA 60
Query: 61 MARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
+ARK+YL G+GV + RR YG P H + SG V R+IL QL+ I+ +
Sbjct: 61 IARKVYLNNGIGVMALRRAYGDQYNKHYYPSHRTLGSGKVNRYILQQLEKMGIVG-KIQS 119
Query: 121 GRRITSSGQRDLDQVAGRI 139
GR +T G++D+D++A +
Sbjct: 120 GRSLTKEGRKDMDKIASKF 138
>sp|P24494|RS19G_ASCSU 40S ribosomal protein S19G OS=Ascaris suum GN=RPS19G PE=2 SV=1
Length = 148
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 93/140 (66%), Gaps = 1/140 (0%)
Query: 1 METAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAAS 60
M A +VKDV HE V+ A LK+SGK+++P W+D+ K G KELAP + DWYY+R AS
Sbjct: 1 MVKATSVKDVDQHEIVQHIAKFLKKSGKVKVPEWSDVTKMGISKELAPLNSDWYYVRTAS 60
Query: 61 MARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
+AR++Y+R GV + R +YGG KR G P HF+K+SGSV R L L+ ++ G
Sbjct: 61 IARRLYVRSPTGVDALRLVYGGSKRRGVVPNHFAKASGSVIRKALQTLEAIKWVQKHPDG 120
Query: 121 -GRRITSSGQRDLDQVAGRI 139
GR +T G++DLD++A ++
Sbjct: 121 NGRVLTKQGRKDLDRIASQM 140
>sp|O18650|RS19_CAEEL 40S ribosomal protein S19 OS=Caenorhabditis elegans GN=rps-19 PE=2
SV=1
Length = 146
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 64/137 (46%), Positives = 92/137 (67%), Gaps = 2/137 (1%)
Query: 1 METAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAAS 60
M A ++KDV HE K+ A LK+SGK+++P W+D+VK G KELAP DPDW+Y RAAS
Sbjct: 1 MTRATSIKDVDQHEATKSIAHFLKKSGKVKVPEWSDLVKLGVNKELAPVDPDWFYTRAAS 60
Query: 61 MARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
+AR +Y R G+G+F+++YGG KR G P HF S+G+ R + QL+ +E G
Sbjct: 61 LARHLYFRPA-GIGAFKKVYGGNKRRGVAPNHFQTSAGNCLRKAVQQLEKIKWVEKHPDG 119
Query: 121 -GRRITSSGQRDLDQVA 136
GR ++ G++DLD++A
Sbjct: 120 KGRILSKQGRKDLDRIA 136
>sp|P07281|RS19B_YEAST 40S ribosomal protein S19-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS19B PE=1 SV=2
Length = 144
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPD-WYYIRAASMARK 64
+V+DV+ +F+ AYA+ L+R GK+E+P + DIVKT + E+ P D + W+Y RAAS+AR
Sbjct: 5 SVRDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARH 64
Query: 65 IYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRI 124
IY+R +GVG ++YGG K G RP +SGS+ R +L L+ I+E+ KGGRRI
Sbjct: 65 IYMRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEISPKGGRRI 124
Query: 125 TSSGQRDLDQVAGR 138
+ +GQRDLD++A +
Sbjct: 125 SENGQRDLDRIAAQ 138
>sp|P07280|RS19A_YEAST 40S ribosomal protein S19-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS19A PE=1 SV=2
Length = 144
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPD-WYYIRAASMARK 64
+V+DV+ +F+ AYA+ L+R GK+E+P + DIVKT + E+ P D + W+Y RAAS+AR
Sbjct: 5 SVRDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARH 64
Query: 65 IYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRI 124
IY+R +GVG ++YGG K G RP +SGS+ R +L L+ I+E+ KGGRRI
Sbjct: 65 IYMRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEISPKGGRRI 124
Query: 125 TSSGQRDLDQVAGR 138
+ +GQRDLD++A +
Sbjct: 125 SENGQRDLDRIAAQ 138
>sp|Q7KS38|RS19B_DROME 40S ribosomal protein S19b OS=Drosophila melanogaster GN=RpS19b
PE=1 SV=3
Length = 155
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 82/134 (61%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
VK++ H K AA LK+SGKI +P +KTG KE AP D DW+Y R AS+ R +
Sbjct: 5 TVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASIMRHL 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRIT 125
YLR GVG+F ++Y G KRNG RP +SS R L L+ N++E GGR++T
Sbjct: 65 YLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDGGRKLT 124
Query: 126 SSGQRDLDQVAGRI 139
GQR+LD++A +I
Sbjct: 125 PQGQRNLDRIANKI 138
>sp|O27653|RS19E_METTH 30S ribosomal protein S19e OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rps19e PE=3 SV=1
Length = 145
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 80/133 (60%), Gaps = 1/133 (0%)
Query: 7 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIY 66
V DV + A LK K++ P W + VKTG KE P +PDW+Y+RAA++ R++Y
Sbjct: 4 VYDVPADLLINRVAEELKNDSKVKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRVY 63
Query: 67 LRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITS 126
+ G +GV S R YGG K GSRP F + SG++ R L QL+++ +I+ + + GR IT
Sbjct: 64 IDGPVGVNSLRTHYGGKKDRGSRPEKFRRGSGAIIRRALQQLEESGLIKRE-ENGRVITP 122
Query: 127 SGQRDLDQVAGRI 139
G+ LD+ A +
Sbjct: 123 EGRSFLDKAAAEV 135
>sp|O28210|RS19E_ARCFU 30S ribosomal protein S19e OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rps19e PE=3 SV=1
Length = 147
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 77/134 (57%), Gaps = 3/134 (2%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
V DV +K A LK + P W VKTG KE +P DW+Y+R AS+ R++
Sbjct: 3 TVYDVPADLLIKRVAERLK--DMVAPPEWAKYVKTGVHKERSPEQDDWWYLRLASIFRRV 60
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRIT 125
Y+ G +G+ R YGG KR GS+PP F K SG++ R+ LHQL+ ++ ++ GR +T
Sbjct: 61 YIDGPVGIERLRTFYGGRKRRGSKPPKFRKGSGAIVRNALHQLEQLGFVK-KTREGRVVT 119
Query: 126 SSGQRDLDQVAGRI 139
G+ LD+VA +
Sbjct: 120 PMGRSFLDKVATEL 133
>sp|P54057|RS19E_METJA 30S ribosomal protein S19e OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rps19e PE=3 SV=1
Length = 148
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
V DV + ++ A LK I +P W D VKTG +E P DW+YIR AS+ RKI
Sbjct: 3 TVYDVPADKLIQKTAEKLKEMN-IGVPEWVDFVKTGVSRERRPDQDDWWYIRCASILRKI 61
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRIT 125
Y+ G +GV R YGG K G P HF K SG++ R L +L+ ++E + GR +T
Sbjct: 62 YIYGPVGVSRLRTAYGGRKNRGHEPEHFYKGSGNIIRKALQELEKLGLVE-KTPEGRVVT 120
Query: 126 SSGQRDLDQVAGRI 139
G+ LD +A +
Sbjct: 121 PKGRSFLDNIAKEV 134
>sp|P19952|RS19E_HALMA 30S ribosomal protein S19e OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rps19e PE=1
SV=3
Length = 153
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Query: 9 DVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLR 68
DV P E ++A L IE P W + KTG +EL P D++ RAAS+ RK+ +
Sbjct: 6 DVPPEELIEALTETLADEDDIEAPDWAEFTKTGVDRELPPEQEDFWTRRAASLLRKVAVD 65
Query: 69 GGLGVGSFRRIYGGGKRNGS----RPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRI 124
G +GV + R YG K+ + RP +K SG++ R L QL+D +E GRR+
Sbjct: 66 GPVGVNALRSEYGTSKQGTTRYRVRPHQKTKGSGNIIRTALQQLEDAGYVETSENDGRRV 125
Query: 125 TSSGQRDLDQVAGRI 139
T G+ LD AG +
Sbjct: 126 TGDGRSLLDDTAGDL 140
>sp|Q9V0G8|RS19E_PYRAB 30S ribosomal protein S19e OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rps19e PE=1 SV=1
Length = 150
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 69/134 (51%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
V DV V+ A LK +I+ P W VKTG KE P DW+Y R AS+ R++
Sbjct: 3 TVYDVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRV 62
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRIT 125
YL G +G+ R YGG K G P F K+ GS+ R L QL+ +E GR IT
Sbjct: 63 YLDGPVGIERLRTYYGGRKNRGHAPERFYKAGGSIIRKALQQLEAAGFVEKVPGKGRVIT 122
Query: 126 SSGQRDLDQVAGRI 139
G+ LD++A +
Sbjct: 123 PKGRSFLDKIATEL 136
>sp|Q9YD22|RS19E_AERPE 30S ribosomal protein S19e OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rps19e
PE=3 SV=1
Length = 153
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 76/136 (55%), Gaps = 2/136 (1%)
Query: 6 NVKDVSPHEFVKAYAAHLK-RSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARK 64
N +V ++ A LK + +++ P W KTG KE P D DW+Y+RAAS+ RK
Sbjct: 3 NALEVPADLLIRRVARKLKEKYPQVKPPAWAYFAKTGPHKERPPTDRDWWYVRAASILRK 62
Query: 65 IYLRG-GLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRR 123
+Y +G+ +FR IYGG + GS P HF K+ GSV R IL QL++ ++ GR
Sbjct: 63 LYKSPEPIGIETFRTIYGGRQNRGSAPEHFRKAGGSVPRKILQQLEEAGLVVKVPGRGRT 122
Query: 124 ITSSGQRDLDQVAGRI 139
I+ +G+ LD A I
Sbjct: 123 ISPAGRSLLDTTAREI 138
>sp|O59041|RS19E_PYRHO 30S ribosomal protein S19e OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rps19e PE=3 SV=1
Length = 150
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 69/134 (51%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
V DV V+ A LK +I+ P W VKTG KE P DW+Y R AS+ R++
Sbjct: 3 TVYDVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRV 62
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRIT 125
Y+ G +G+ R YGG K G P F K+ GS+ R L QL+ IE GR +T
Sbjct: 63 YIDGPVGIERLRTYYGGRKNRGHAPERFYKAGGSIIRKALQQLEAAGFIEKVPGKGRVVT 122
Query: 126 SSGQRDLDQVAGRI 139
G+ LD++A +
Sbjct: 123 PKGRSFLDKIATEL 136
>sp|Q9HM21|RS19E_THEAC 30S ribosomal protein S19e OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=rps19e PE=3 SV=1
Length = 150
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
+VK V + + LK KI P W+ VKTG +E +P + DW Y+RAA+M RK+
Sbjct: 3 SVKYVPSDLLINYVSEKLKSEKKIAEPDWSKYVKTGISREKSPVNRDWIYVRAAAMLRKL 62
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRIT 125
Y+ G LG+ YGG GS+ H ++ S S+ R++ H+L+ ++ K GR ++
Sbjct: 63 YINGYLGISRMSSEYGGKVDRGSKRYHAAQGSRSIIRYLFHELEKAGYVQKTPK-GRSLS 121
Query: 126 SSGQRDLDQVAGRI 139
G LD + I
Sbjct: 122 PQGMSLLDNASKDI 135
>sp|Q97CU4|RS19E_THEVO 30S ribosomal protein S19e OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
GN=rps19e PE=3 SV=1
Length = 150
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 32 PTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPP 91
P W VKTG KE P DW Y+RAASM RK+Y+ G LG+ YGG GS+
Sbjct: 29 PNWVKFVKTGVSKEKPPLQDDWIYVRAASMLRKLYINGYLGISRMSSEYGGKVDRGSKRY 88
Query: 92 HFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRI 139
H + S S+ R + H+L+ +++ K GR ++ G LD + I
Sbjct: 89 HAASGSRSITRFLFHELESAGLVQKTQK-GRSLSPQGMSLLDNASKEI 135
>sp|Q8SQS8|RS19_ENCCU 40S ribosomal protein S19 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPS19 PE=1 SV=1
Length = 137
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%)
Query: 7 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIY 66
+ +V P +F +A ++LK + ++ +DI+KTG +E AP + DWY+ R AS+ R+I
Sbjct: 5 IYEVMPEKFNEALKSYLKSTNEVVPLQDHDIMKTGEGREQAPIEEDWYFTRMASIVRQIS 64
Query: 67 LRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQD 110
++G + + YG K G RP + + + +L L++
Sbjct: 65 IKGAVTSEFLAKRYGSLKNRGCRPSKYVGAYPEIGESVLENLKN 108
>sp|P80735|SODN_STRCO Superoxide dismutase [Ni] OS=Streptomyces coelicolor (strain ATCC
BAA-471 / A3(2) / M145) GN=sodN PE=1 SV=2
Length = 131
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Query: 89 RPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVA 136
+PPHF K LHQL + + L + G + ++GQ+ LD +A
Sbjct: 78 KPPHFEKYPE------LHQLVNDTLKALSAAKGSKDPATGQKALDYIA 119
>sp|C9S0R2|BGAL_GEOSY Beta-galactosidase BgaB OS=Geobacillus sp. (strain Y412MC61)
GN=bgaB PE=3 SV=1
Length = 672
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 27 GKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRG-GLGVGSF 76
G+ + TW DI++ + LA + DWY A + R Y +G G+ VG++
Sbjct: 528 GEYDCTTWADIIRLEGAEPLATFKGDWYAGLPA-VTRNCYGKGEGIYVGTY 577
>sp|P19668|BGAL_GEOKU Beta-galactosidase bgaB OS=Geobacillus kaustophilus GN=bgaB PE=1
SV=1
Length = 672
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 27 GKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRG-GLGVGSF 76
G+ + TW DI++ + LA + DWY A + R Y +G G+ VG++
Sbjct: 528 GEYDCTTWADIIRLEGAEPLATFKGDWYAGLPA-VTRNCYGKGEGIYVGTY 577
>sp|Q67JT4|RPOC_SYMTH DNA-directed RNA polymerase subunit beta' OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=rpoC PE=3 SV=1
Length = 1179
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Query: 12 PHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWY 54
PHE + AY ++G +EL W +I K+L PY +W+
Sbjct: 518 PHEALLAY-----QNGLVELHDWVEIRFPEPPKDLEPYSEEWW 555
>sp|Q3AD50|HIS5_CARHZ Imidazole glycerol phosphate synthase subunit HisH
OS=Carboxydothermus hydrogenoformans (strain Z-2901 /
DSM 6008) GN=hisH PE=3 SV=1
Length = 199
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 7/104 (6%)
Query: 9 DVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLR 68
D+ P E V+ +++ KI WN++V T EL PD+Y S + R
Sbjct: 99 DLIPGEVVR-----FQKAPKIPHMGWNNLVPVDTTHELFKNLPDYYVYFVHSYYAQTDSR 153
Query: 69 GGLGVGSFRRIYGGGKRNGSRP--PHFSKSSGSVARHILHQLQD 110
L + + R GS + SG V R IL L++
Sbjct: 154 YVLAYTEYGEKFPAAVRRGSIIGFQFHPEKSGPVGRQILKNLRE 197
>sp|Q64VB3|Y1818_BACFR Uncharacterized transporter BF1818 OS=Bacteroides fragilis (strain
YCH46) GN=BF1818 PE=3 SV=1
Length = 553
Score = 29.3 bits (64), Expect = 8.7, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 5 KNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTG 41
K++KD++ + K + L R G + +PT I+K G
Sbjct: 216 KSIKDIAHMSYPKFVISRLWRDGNVSIPTSEKIIKEG 252
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,167,305
Number of Sequences: 539616
Number of extensions: 2429665
Number of successful extensions: 7560
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 7507
Number of HSP's gapped (non-prelim): 49
length of query: 144
length of database: 191,569,459
effective HSP length: 106
effective length of query: 38
effective length of database: 134,370,163
effective search space: 5106066194
effective search space used: 5106066194
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)