BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032245
(144 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224073967|ref|XP_002304206.1| hypothetical protein POPTRDRAFT_712066 [Populus trichocarpa]
gi|118487059|gb|ABK95360.1| unknown [Populus trichocarpa]
gi|222841638|gb|EEE79185.1| hypothetical protein POPTRDRAFT_712066 [Populus trichocarpa]
Length = 144
Score = 265 bits (678), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 133/144 (92%), Positives = 138/144 (95%)
Query: 1 MASLATIAAVQPATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFDL 60
MASLAT AAVQPATIKGLGGSSL+GTKL VKP+RQ RPKS ++GAVVAKYGDKSVYFDL
Sbjct: 1 MASLATFAAVQPATIKGLGGSSLSGTKLHVKPSRQGLRPKSLRSGAVVAKYGDKSVYFDL 60
Query: 61 EDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120
EDLGNTTGQWDLYGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT
Sbjct: 61 EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120
Query: 121 ASGDILPIKKGPQLPPKLGPRGKI 144
ASGDILPIKKGPQLPPKLGPRGK+
Sbjct: 121 ASGDILPIKKGPQLPPKLGPRGKL 144
>gi|351726538|ref|NP_001236618.1| uncharacterized protein LOC100499832 [Glycine max]
gi|255627007|gb|ACU13848.1| unknown [Glycine max]
Length = 144
Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/144 (89%), Positives = 137/144 (95%)
Query: 1 MASLATIAAVQPATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFDL 60
MASLAT+AAVQPATI GL GSSL+GTKL+ KP+R S + K+F++GAVVAKYGDKSVYFDL
Sbjct: 1 MASLATLAAVQPATINGLAGSSLSGTKLSFKPSRHSVKSKNFRSGAVVAKYGDKSVYFDL 60
Query: 61 EDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120
EDLGNTTGQWDLYGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT
Sbjct: 61 EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120
Query: 121 ASGDILPIKKGPQLPPKLGPRGKI 144
ASGDILPIKKGPQLPPKLGPRGKI
Sbjct: 121 ASGDILPIKKGPQLPPKLGPRGKI 144
>gi|255549948|ref|XP_002516025.1| Photosystem I reaction center subunit VI, chloroplast precursor,
putative [Ricinus communis]
gi|223544930|gb|EEF46445.1| Photosystem I reaction center subunit VI, chloroplast precursor,
putative [Ricinus communis]
Length = 144
Score = 258 bits (660), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 129/144 (89%), Positives = 135/144 (93%)
Query: 1 MASLATIAAVQPATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFDL 60
MASLAT AAVQPAT+KGLGGSSL GTKL VKP+RQS RPK+ + GAV AKYGDKSVYFDL
Sbjct: 1 MASLATFAAVQPATVKGLGGSSLTGTKLHVKPSRQSLRPKNRRNGAVEAKYGDKSVYFDL 60
Query: 61 EDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120
EDLGNTTGQWDLYGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILGGGSTLAY SAT
Sbjct: 61 EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYLSAT 120
Query: 121 ASGDILPIKKGPQLPPKLGPRGKI 144
A+GD+LPIKKGPQLPPKLGPRGKI
Sbjct: 121 ATGDVLPIKKGPQLPPKLGPRGKI 144
>gi|388522817|gb|AFK49470.1| unknown [Lotus japonicus]
Length = 144
Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/144 (88%), Positives = 135/144 (93%)
Query: 1 MASLATIAAVQPATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFDL 60
MASLAT+AAVQPA I GL GSSL GTKL+ K +RQS + K+F+ GAVVAKYGDKSVYFDL
Sbjct: 1 MASLATLAAVQPAAINGLAGSSLNGTKLSFKSSRQSIKSKNFRNGAVVAKYGDKSVYFDL 60
Query: 61 EDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120
ED+GNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAY+SAT
Sbjct: 61 EDIGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYYSAT 120
Query: 121 ASGDILPIKKGPQLPPKLGPRGKI 144
ASGDILPIKKGPQLPPKLGPRGKI
Sbjct: 121 ASGDILPIKKGPQLPPKLGPRGKI 144
>gi|359806751|ref|NP_001241299.1| uncharacterized protein LOC100811201 [Glycine max]
gi|255626535|gb|ACU13612.1| unknown [Glycine max]
Length = 144
Score = 255 bits (652), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 126/144 (87%), Positives = 136/144 (94%)
Query: 1 MASLATIAAVQPATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFDL 60
MASLAT+AAVQPA + GL GSSL+GTKL+ KP+R + + K+F++GAVVAKYGDKSVYFDL
Sbjct: 1 MASLATLAAVQPAALNGLAGSSLSGTKLSFKPSRHTVKSKNFRSGAVVAKYGDKSVYFDL 60
Query: 61 EDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120
EDLGNTTGQWDLYGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT
Sbjct: 61 EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120
Query: 121 ASGDILPIKKGPQLPPKLGPRGKI 144
ASGDILPIKKGPQLPPKLGPRGKI
Sbjct: 121 ASGDILPIKKGPQLPPKLGPRGKI 144
>gi|115187527|gb|ABI84258.1| photosystem I psaH protein [Arachis hypogaea]
Length = 144
Score = 251 bits (641), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 124/144 (86%), Positives = 133/144 (92%)
Query: 1 MASLATIAAVQPATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFDL 60
MASLAT+AAVQPA + GL GSSL GTKL+ K + Q+ + K F++GAVVAKYGDKSVYFDL
Sbjct: 1 MASLATLAAVQPAAVNGLAGSSLNGTKLSFKSSHQTLKSKKFRSGAVVAKYGDKSVYFDL 60
Query: 61 EDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120
ED+GNTTGQWDLYGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT
Sbjct: 61 EDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120
Query: 121 ASGDILPIKKGPQLPPKLGPRGKI 144
ASGDILPIKKGPQLPPKLGPRGKI
Sbjct: 121 ASGDILPIKKGPQLPPKLGPRGKI 144
>gi|358248194|ref|NP_001240092.1| uncharacterized protein LOC100776789 [Glycine max]
gi|255640766|gb|ACU20667.1| unknown [Glycine max]
Length = 139
Score = 251 bits (640), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 125/144 (86%), Positives = 136/144 (94%), Gaps = 5/144 (3%)
Query: 1 MASLATIAAVQPATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFDL 60
MASLA++A VQP+T+KGL AGTKL+ KP+RQSFRPK+F++GAVVAKYGDKSVYFDL
Sbjct: 1 MASLASLAVVQPSTVKGL-----AGTKLSFKPSRQSFRPKNFRSGAVVAKYGDKSVYFDL 55
Query: 61 EDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120
EDLGNTTGQWDLYGSDAPSPYN LQSKFFETFA+PFTKRGLLLKFLILGGGSTLAYFS+T
Sbjct: 56 EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFASPFTKRGLLLKFLILGGGSTLAYFSST 115
Query: 121 ASGDILPIKKGPQLPPKLGPRGKI 144
ASGDILPIKKGPQLPPKLGPRGKI
Sbjct: 116 ASGDILPIKKGPQLPPKLGPRGKI 139
>gi|407353|dbj|BAA04633.1| PSI-H precursor [Nicotiana sylvestris]
Length = 145
Score = 248 bits (634), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 126/145 (86%), Positives = 133/145 (91%), Gaps = 1/145 (0%)
Query: 1 MASLATIAAVQPAT-IKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFD 59
MASLAT+ VQP T IKGL GSS+AGTKL VK +R + +P +AGAVVAKYGDKSVYFD
Sbjct: 1 MASLATLTVVQPTTTIKGLAGSSIAGTKLHVKSSRLNLKPSKSRAGAVVAKYGDKSVYFD 60
Query: 60 LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSA 119
LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFS+
Sbjct: 61 LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSS 120
Query: 120 TASGDILPIKKGPQLPPKLGPRGKI 144
TASGDILPIKKGPQLPPKLGPRGKI
Sbjct: 121 TASGDILPIKKGPQLPPKLGPRGKI 145
>gi|110631498|gb|ABG81094.1| photosystem I subunit H [Pelargonium x hortorum]
Length = 161
Score = 247 bits (630), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 124/146 (84%), Positives = 132/146 (90%), Gaps = 2/146 (1%)
Query: 1 MASLATIAAVQPAT--IKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYF 58
MASLAT AAVQP+ +KGL GSS++G KL +PTRQSFR + AVVAKYGDKSVYF
Sbjct: 1 MASLATFAAVQPSISPVKGLAGSSISGKKLHFQPTRQSFRQTKLRTSAVVAKYGDKSVYF 60
Query: 59 DLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFS 118
DLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFS
Sbjct: 61 DLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFS 120
Query: 119 ATASGDILPIKKGPQLPPKLGPRGKI 144
+TA+GDILPIKKGPQLPPKLGPRGKI
Sbjct: 121 STATGDILPIKKGPQLPPKLGPRGKI 146
>gi|357454927|ref|XP_003597744.1| Photosystem I reaction center subunit VI [Medicago truncatula]
gi|217075672|gb|ACJ86196.1| unknown [Medicago truncatula]
gi|355486792|gb|AES67995.1| Photosystem I reaction center subunit VI [Medicago truncatula]
gi|388507210|gb|AFK41671.1| unknown [Medicago truncatula]
Length = 147
Score = 244 bits (623), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 124/147 (84%), Positives = 134/147 (91%), Gaps = 3/147 (2%)
Query: 1 MASLAT-IAAVQPA--TIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVY 57
MASLAT +A VQPA +KGL GSS+ GTKLT KP+RQ F+ + ++G+VVAKYGDKSVY
Sbjct: 1 MASLATSLACVQPAGLNVKGLAGSSITGTKLTFKPSRQIFKSNNLRSGSVVAKYGDKSVY 60
Query: 58 FDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYF 117
FDLED+GNTTGQWDLYGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYF
Sbjct: 61 FDLEDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYF 120
Query: 118 SATASGDILPIKKGPQLPPKLGPRGKI 144
SATASGDILPIKKGPQLPPKLGPRGKI
Sbjct: 121 SATASGDILPIKKGPQLPPKLGPRGKI 147
>gi|407355|dbj|BAA04634.1| PSI-H precursor [Nicotiana sylvestris]
Length = 145
Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 123/145 (84%), Positives = 132/145 (91%), Gaps = 1/145 (0%)
Query: 1 MASLATIAAVQPAT-IKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFD 59
MASLAT+AAVQP T + GL GSS+ GTKL VK +R + + +AG+VVAKYGDKSVYFD
Sbjct: 1 MASLATLAAVQPTTAVNGLAGSSIIGTKLHVKSSRLNLKSTKSRAGSVVAKYGDKSVYFD 60
Query: 60 LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSA 119
LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFS+
Sbjct: 61 LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSS 120
Query: 120 TASGDILPIKKGPQLPPKLGPRGKI 144
TASGDILPIKKGPQLPPKLGPRGKI
Sbjct: 121 TASGDILPIKKGPQLPPKLGPRGKI 145
>gi|351725503|ref|NP_001235815.1| uncharacterized protein LOC100500540 [Glycine max]
gi|255630589|gb|ACU15654.1| unknown [Glycine max]
Length = 139
Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 123/144 (85%), Positives = 132/144 (91%), Gaps = 5/144 (3%)
Query: 1 MASLATIAAVQPATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFDL 60
MASLA++A VQP+T+KGL AGTKL+ KP+RQSFRPK+F++GAVVAKYGDKSVYFDL
Sbjct: 1 MASLASLAVVQPSTVKGL-----AGTKLSFKPSRQSFRPKNFRSGAVVAKYGDKSVYFDL 55
Query: 61 EDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120
EDLGNTTGQWD YGSDAPSPYN LQSK FETFAAPFTKRGLLLKFLILGGGSTLAY SAT
Sbjct: 56 EDLGNTTGQWDSYGSDAPSPYNPLQSKLFETFAAPFTKRGLLLKFLILGGGSTLAYLSAT 115
Query: 121 ASGDILPIKKGPQLPPKLGPRGKI 144
ASGDILPIKKGPQLPPK GPRGKI
Sbjct: 116 ASGDILPIKKGPQLPPKPGPRGKI 139
>gi|33520419|gb|AAQ21121.1| photosystem I psaH protein [Trifolium pratense]
Length = 146
Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/146 (83%), Positives = 132/146 (90%), Gaps = 2/146 (1%)
Query: 1 MASLATIAAVQPA--TIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYF 58
MASLAT+A VQP+ +KGL GSS GTKL+ KP+RQS + K+ ++ +VVAKYGDKSVYF
Sbjct: 1 MASLATLACVQPSALNVKGLAGSSFTGTKLSFKPSRQSVKSKNLRSVSVVAKYGDKSVYF 60
Query: 59 DLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFS 118
DLEDLGNTTGQWDLYGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFS
Sbjct: 61 DLEDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFS 120
Query: 119 ATASGDILPIKKGPQLPPKLGPRGKI 144
ATASGDILPIKKGPQLPPKLGPR KI
Sbjct: 121 ATASGDILPIKKGPQLPPKLGPRDKI 146
>gi|397555|emb|CAA43841.1| photosystem I psaH protein [Nicotiana sylvestris]
Length = 145
Score = 242 bits (617), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 123/145 (84%), Positives = 131/145 (90%), Gaps = 1/145 (0%)
Query: 1 MASLATIAAVQPAT-IKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFD 59
MASLA AAVQP T +KGL GSS+ GTKL +K +R + +P +AG VVAKYGDKSVYFD
Sbjct: 1 MASLAAFAAVQPTTNVKGLAGSSITGTKLHLKSSRLNLKPTKSRAGPVVAKYGDKSVYFD 60
Query: 60 LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSA 119
LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFS+
Sbjct: 61 LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSS 120
Query: 120 TASGDILPIKKGPQLPPKLGPRGKI 144
TASGDILPIKKGPQLPPKLGPRGKI
Sbjct: 121 TASGDILPIKKGPQLPPKLGPRGKI 145
>gi|15218186|ref|NP_175633.1| photosystem I reaction center subunit VI-2 [Arabidopsis thaliana]
gi|17369623|sp|Q9SUI6.1|PSAH2_ARATH RecName: Full=Photosystem I reaction center subunit VI-2,
chloroplastic; AltName: Full=PSI-H1; Flags: Precursor
gi|6850347|gb|AAF29410.1|AC022354_9 photosystem I subunit VI precursor [Arabidopsis thaliana]
gi|14326518|gb|AAK60304.1|AF385712_1 At1g52230/F9I5_11 [Arabidopsis thaliana]
gi|5734524|emb|CAB52750.1| photosystem I subunit VI precursor [Arabidopsis thaliana]
gi|21553440|gb|AAM62533.1| Photosystem I reaction center subunit VI-2, chloroplast precursor
(PSI-H1) [Arabidopsis thaliana]
gi|22137304|gb|AAM91497.1| At1g52230/F9I5_11 [Arabidopsis thaliana]
gi|332194651|gb|AEE32772.1| photosystem I reaction center subunit VI-2 [Arabidopsis thaliana]
Length = 145
Score = 242 bits (617), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 121/145 (83%), Positives = 132/145 (91%), Gaps = 1/145 (0%)
Query: 1 MASLATIAAVQP-ATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFD 59
MAS ATIAAVQP A +KGLGGSSLAG KL +KP+RQSF+ KS +AGAVVAKYGDKSVYFD
Sbjct: 1 MASFATIAAVQPSAAVKGLGGSSLAGAKLFIKPSRQSFKTKSTRAGAVVAKYGDKSVYFD 60
Query: 60 LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSA 119
LEDLGNTTGQWD+YGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILGGGS L Y SA
Sbjct: 61 LEDLGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA 120
Query: 120 TASGDILPIKKGPQLPPKLGPRGKI 144
++GD+LPIK+GPQ PPKLGPRGK+
Sbjct: 121 NSTGDVLPIKRGPQEPPKLGPRGKL 145
>gi|15233291|ref|NP_188235.1| photosystem I reaction center subunit VI-1 [Arabidopsis thaliana]
gi|20143886|sp|Q9SUI7.1|PSAH1_ARATH RecName: Full=Photosystem I reaction center subunit VI-1,
chloroplastic; AltName: Full=PSI-H1; Flags: Precursor
gi|5734522|emb|CAB52749.1| photosystem I subunit VI precursor [Arabidopsis thaliana]
gi|9294461|dbj|BAB02680.1| photosystem I subunit VI (PSI-H) precursor-like protein
[Arabidopsis thaliana]
gi|21618081|gb|AAM67131.1| photosystem I subunit VI precursor [Arabidopsis thaliana]
gi|110740595|dbj|BAE98402.1| PSI-H protein [Arabidopsis thaliana]
gi|114050607|gb|ABI49453.1| At3g16140 [Arabidopsis thaliana]
gi|332642255|gb|AEE75776.1| photosystem I reaction center subunit VI-1 [Arabidopsis thaliana]
Length = 145
Score = 241 bits (614), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 119/145 (82%), Positives = 133/145 (91%), Gaps = 1/145 (0%)
Query: 1 MASLATIAAVQP-ATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFD 59
MASLAT+AAV+P A IKGLGGSSLAG KL++KP+R SF+PKS +A VVAKYGDKSVYFD
Sbjct: 1 MASLATVAAVKPSAAIKGLGGSSLAGAKLSIKPSRLSFKPKSIRANGVVAKYGDKSVYFD 60
Query: 60 LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSA 119
LEDLGNTTGQWD+YGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILGGGS L Y SA
Sbjct: 61 LEDLGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA 120
Query: 120 TASGDILPIKKGPQLPPKLGPRGKI 144
T++G++LPIK+GPQ PPKLGPRGK+
Sbjct: 121 TSTGEVLPIKRGPQEPPKLGPRGKL 145
>gi|297847604|ref|XP_002891683.1| hypothetical protein ARALYDRAFT_474340 [Arabidopsis lyrata subsp.
lyrata]
gi|297337525|gb|EFH67942.1| hypothetical protein ARALYDRAFT_474340 [Arabidopsis lyrata subsp.
lyrata]
Length = 145
Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/145 (82%), Positives = 131/145 (90%), Gaps = 1/145 (0%)
Query: 1 MASLATIAAVQP-ATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFD 59
MAS ATIAAVQP A +KGLGGSSL G KL +KP+RQSF+ KS +AGAVVAKYGDKSVYFD
Sbjct: 1 MASFATIAAVQPSAAVKGLGGSSLVGAKLFIKPSRQSFKTKSTRAGAVVAKYGDKSVYFD 60
Query: 60 LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSA 119
LEDLGNTTGQWD+YGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILGGGS L Y SA
Sbjct: 61 LEDLGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA 120
Query: 120 TASGDILPIKKGPQLPPKLGPRGKI 144
++GD+LPIK+GPQ PPKLGPRGK+
Sbjct: 121 NSTGDVLPIKRGPQEPPKLGPRGKL 145
>gi|3914442|sp|O04006.1|PSAH_BRARA RecName: Full=Photosystem I reaction center subunit VI,
chloroplastic; Short=PSI-H; AltName:
Full=Light-harvesting complex I 11 kDa protein; Flags:
Precursor
gi|1916350|gb|AAB51159.1| PSI-H subunit [Brassica rapa]
Length = 145
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/145 (82%), Positives = 132/145 (91%), Gaps = 1/145 (0%)
Query: 1 MASLATIAAVQP-ATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFD 59
MAS ATIAAVQP + +KGLGGSSL G KL +KP+RQSF+PKS +AGAVVAKYGDKSVYFD
Sbjct: 1 MASFATIAAVQPYSAVKGLGGSSLTGAKLFIKPSRQSFKPKSTRAGAVVAKYGDKSVYFD 60
Query: 60 LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSA 119
LEDLGNTTGQWDLYGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILGGGS L Y SA
Sbjct: 61 LEDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA 120
Query: 120 TASGDILPIKKGPQLPPKLGPRGKI 144
+++GD+LPIK+GPQ PKLGPRGK+
Sbjct: 121 SSTGDVLPIKRGPQEKPKLGPRGKL 145
>gi|131199|sp|P22179.1|PSAH_SPIOL RecName: Full=Photosystem I reaction center subunit VI,
chloroplastic; Short=PSI-H; AltName:
Full=Light-harvesting complex I 11 kDa protein; Flags:
Precursor
gi|268612151|pdb|2WSC|H Chain H, Improved Model Of Plant Photosystem I
gi|268612169|pdb|2WSE|H Chain H, Improved Model Of Plant Photosystem I
gi|268612187|pdb|2WSF|H Chain H, Improved Model Of Plant Photosystem I
gi|21287|emb|CAA34749.1| psaH [Spinacia oleracea]
Length = 144
Score = 238 bits (608), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 115/144 (79%), Positives = 128/144 (88%)
Query: 1 MASLATIAAVQPATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFDL 60
MASLAT+AAVQP T+KGL GSS+AGTKL +KP RQSF+ + ++GA+VAKYGDKSVYFDL
Sbjct: 1 MASLATLAAVQPTTLKGLAGSSIAGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFDL 60
Query: 61 EDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120
ED+ NTTGQWD+YGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGS L Y SA
Sbjct: 61 EDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSAN 120
Query: 121 ASGDILPIKKGPQLPPKLGPRGKI 144
A D+LPI +GPQ PPKLGPRGKI
Sbjct: 121 APQDVLPITRGPQQPPKLGPRGKI 144
>gi|445928|prf||1910333A photosystem I:SUBUNIT=PS I-H
Length = 145
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/145 (81%), Positives = 126/145 (86%), Gaps = 1/145 (0%)
Query: 1 MASLATIAAVQPAT-IKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFD 59
MASLA AAVQP T +KGL GSS+ GTKL +K +R + +P +AG VVAK GDKSV FD
Sbjct: 1 MASLAAFAAVQPTTNVKGLAGSSITGTKLHLKSSRLNLKPTKSRAGPVVAKVGDKSVVFD 60
Query: 60 LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSA 119
LEDLGNTTGQWDL GSDAPSP NSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLA FS+
Sbjct: 61 LEDLGNTTGQWDLVGSDAPSPVNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAVFSS 120
Query: 120 TASGDILPIKKGPQLPPKLGPRGKI 144
TASGDILPIKKGPQLPPKLGPRGKI
Sbjct: 121 TASGDILPIKKGPQLPPKLGPRGKI 145
>gi|268044989|gb|ACY92095.1| photosystem I subunit H [Lycoris radiata]
Length = 145
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/145 (81%), Positives = 125/145 (86%), Gaps = 1/145 (0%)
Query: 1 MASLATIAAVQPATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAG-AVVAKYGDKSVYFD 59
MASL T+A QP T+KGLGGSSL GTKL+V+ R S + S G AVVAKYG+KSVYFD
Sbjct: 1 MASLTTMAVAQPLTVKGLGGSSLHGTKLSVRSRRVSTQSNSKSVGGAVVAKYGEKSVYFD 60
Query: 60 LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSA 119
LEDLGNTTGQWDLYGSDAPSPYN LQSKFFETFA PFTKR LLLKFLILGGGSTLAY S+
Sbjct: 61 LEDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAGPFTKRALLLKFLILGGGSTLAYLSS 120
Query: 120 TASGDILPIKKGPQLPPKLGPRGKI 144
TASGDILPIKKGPQLPPK GPRGKI
Sbjct: 121 TASGDILPIKKGPQLPPKKGPRGKI 145
>gi|445929|prf||1910333B photosystem I:SUBUNIT=PS I-H
Length = 143
Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 118/145 (81%), Positives = 126/145 (86%), Gaps = 3/145 (2%)
Query: 1 MASLATIAAVQPAT-IKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFD 59
MASLAT+ AVQP T IKGL ++AGTKL VK +R + +P +AGAVVAK GDKSV FD
Sbjct: 1 MASLATLTAVQPTTTIKGL--RAIAGTKLNVKSSRLNLKPSKSRAGAVVAKVGDKSVVFD 58
Query: 60 LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSA 119
LEDLGNTTGQWDL GSDAPSP N LQSKFFETFAAPFTKRGLLLKFLILGGGSTLA FS+
Sbjct: 59 LEDLGNTTGQWDLVGSDAPSPVNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAVFSS 118
Query: 120 TASGDILPIKKGPQLPPKLGPRGKI 144
TASGDILPIKKGPQLPPKLGPRGKI
Sbjct: 119 TASGDILPIKKGPQLPPKLGPRGKI 143
>gi|339716080|gb|AEJ88287.1| putative photosystem I PsaH protein [Wolffia australiana]
gi|374096149|gb|AEY84987.1| photosystem I reaction centre subunit VI (chloroplast) [Wolffia
australiana]
gi|374096159|gb|AEY84992.1| photosystem I reaction centre subunit VI (chloroplast) [Wolffia
australiana]
gi|374412416|gb|AEZ49166.1| photosystem I reaction centre subunit VI [Wolffia australiana]
gi|374412438|gb|AEZ49177.1| photosystem I reaction centre subunit VI [Wolffia australiana]
gi|374433986|gb|AEZ52385.1| photosystem I reaction centre subunit VI [Wolffia australiana]
gi|374433988|gb|AEZ52386.1| photosystem I reaction centre subunit VI [Wolffia australiana]
Length = 145
Score = 221 bits (563), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 123/145 (84%), Gaps = 1/145 (0%)
Query: 1 MASLATIAA-VQPATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFD 59
MASLAT V+P KGLGGSSL+GTKL VKP R+S + + GAVVAKYGDKSVYFD
Sbjct: 1 MASLATATTIVRPVNAKGLGGSSLSGTKLAVKPGRRSVSRPNLRHGAVVAKYGDKSVYFD 60
Query: 60 LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSA 119
L D+ N+TGQWDLYGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILGGG T+AY S+
Sbjct: 61 LNDIPNSTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGFTIAYLSS 120
Query: 120 TASGDILPIKKGPQLPPKLGPRGKI 144
T SGD+LPIKKGPQLPPKLGPR KI
Sbjct: 121 TVSGDLLPIKKGPQLPPKLGPRDKI 145
>gi|374096143|gb|AEY84984.1| photosystem I reaction centre subunit VI (chloroplast) [Wolffia
australiana]
Length = 145
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 123/145 (84%), Gaps = 1/145 (0%)
Query: 1 MASLATIAA-VQPATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFD 59
MASLAT V+P KGLGGSSL+GTKL VKP R+S + + GAVVAKYGDKSVYFD
Sbjct: 1 MASLATATTIVRPVNAKGLGGSSLSGTKLAVKPGRRSVSRPNLRHGAVVAKYGDKSVYFD 60
Query: 60 LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSA 119
L D+ N+TGQWDLYGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILGGG T+AY S+
Sbjct: 61 LNDIPNSTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGFTIAYSSS 120
Query: 120 TASGDILPIKKGPQLPPKLGPRGKI 144
T SGD+LPIKKGPQLPPKLGPR KI
Sbjct: 121 TVSGDLLPIKKGPQLPPKLGPRDKI 145
>gi|374412432|gb|AEZ49174.1| photosystem I reaction centre subunit VI [Wolffia australiana]
Length = 145
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 122/145 (84%), Gaps = 1/145 (0%)
Query: 1 MASLATIAA-VQPATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFD 59
MASLAT V+P KGLGGSSL+GTKL VKP R+S + GAVVAKYGDKSVYFD
Sbjct: 1 MASLATATTIVRPVNAKGLGGSSLSGTKLAVKPGRRSVSRPNLGHGAVVAKYGDKSVYFD 60
Query: 60 LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSA 119
L D+ N+TGQWDLYGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILGGG T+AY S+
Sbjct: 61 LNDIPNSTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGFTIAYLSS 120
Query: 120 TASGDILPIKKGPQLPPKLGPRGKI 144
T SGD+LPIKKGPQLPPKLGPR KI
Sbjct: 121 TVSGDLLPIKKGPQLPPKLGPRDKI 145
>gi|131196|sp|P20143.1|PSAH_HORVU RecName: Full=Photosystem I reaction center subunit VI,
chloroplastic; Short=PSI-H; AltName:
Full=Light-harvesting complex I 11 kDa protein; Flags:
Precursor
gi|19093|emb|CAA34218.1| 10.2 kDa photosystem I polypeptide [Hordeum vulgare]
Length = 143
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/143 (70%), Positives = 120/143 (83%), Gaps = 2/143 (1%)
Query: 4 LATIAAVQPATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKA--GAVVAKYGDKSVYFDLE 61
+A++ AVQPA +KGL GSS++G KL V+P+ + + +A AVVAKYG+KSVYFDL+
Sbjct: 1 MASLVAVQPAAVKGLSGSSISGRKLAVRPSSAAVSRSTRRARGAAVVAKYGEKSVYFDLD 60
Query: 62 DLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSATA 121
D+ NTTGQWDLYGSDAPSPYN LQSKFF TFAAPFTKRGLLLKFL++GGGS +AY SA+A
Sbjct: 61 DIANTTGQWDLYGSDAPSPYNGLQSKFFNTFAAPFTKRGLLLKFLLIGGGSLVAYVSASA 120
Query: 122 SGDILPIKKGPQLPPKLGPRGKI 144
S D+LPIKKGPQLPP GPRGKI
Sbjct: 121 SPDLLPIKKGPQLPPTPGPRGKI 143
>gi|351066186|gb|AEQ39067.1| putative photosystem I psaH protein [Wolffia arrhiza]
Length = 140
Score = 204 bits (520), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 106/145 (73%), Positives = 118/145 (81%), Gaps = 6/145 (4%)
Query: 1 MASLATIAAV-QPATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFD 59
MASLAT + +P KGL GS KL +KP R S ++ + G+VVAKYGDKSVYFD
Sbjct: 1 MASLATATTIARPVNAKGLSGS-----KLPIKPARTSLPRRNLRQGSVVAKYGDKSVYFD 55
Query: 60 LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSA 119
L D+ NTTGQWDLYGSD+PSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGG T+AY S+
Sbjct: 56 LNDIPNTTGQWDLYGSDSPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGFTVAYESS 115
Query: 120 TASGDILPIKKGPQLPPKLGPRGKI 144
TASGD+LPIKKGPQ PPKLGPR KI
Sbjct: 116 TASGDLLPIKKGPQEPPKLGPRDKI 140
>gi|324331717|gb|ADY38655.1| putative photosystem I reaction centre subunit VI [Wolffia arrhiza]
Length = 140
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/145 (72%), Positives = 117/145 (80%), Gaps = 6/145 (4%)
Query: 1 MASLATIAAV-QPATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFD 59
MASLAT + +P KGL GS KL +KP R S ++ + G+VVAKYGDKSVYFD
Sbjct: 1 MASLATATTIARPVNAKGLSGS-----KLPIKPARTSLPRRNLRKGSVVAKYGDKSVYFD 55
Query: 60 LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSA 119
L D+ NTTGQWDLYGSD+PSPYNSL SKFFETFAAPFTKRGLLLKFLILGGG T+AY S+
Sbjct: 56 LNDIPNTTGQWDLYGSDSPSPYNSLHSKFFETFAAPFTKRGLLLKFLILGGGFTVAYVSS 115
Query: 120 TASGDILPIKKGPQLPPKLGPRGKI 144
TASGD+LPIKKGPQ PPKLGPR KI
Sbjct: 116 TASGDLLPIKKGPQEPPKLGPRDKI 140
>gi|326524069|dbj|BAJ97045.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326534178|dbj|BAJ89439.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 143
Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 100/143 (69%), Positives = 118/143 (82%), Gaps = 2/143 (1%)
Query: 4 LATIAAVQPATIKGLGGSSLAGTKLTVKPTRQ--SFRPKSFKAGAVVAKYGDKSVYFDLE 61
+A++ AVQPA +KGL GSS++G KL V+P+ S + + AVVAKYG+KSVYFDL+
Sbjct: 1 MASLVAVQPAAVKGLSGSSISGRKLAVRPSSAAASRSTRRARGAAVVAKYGEKSVYFDLD 60
Query: 62 DLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSATA 121
D+ NTTGQWDLYGSDA SPYN LQSKFF TFAAPFTKRGLLLKFL++GGGS +AY SA+A
Sbjct: 61 DIANTTGQWDLYGSDAASPYNGLQSKFFNTFAAPFTKRGLLLKFLLIGGGSLVAYVSASA 120
Query: 122 SGDILPIKKGPQLPPKLGPRGKI 144
S D+LPIKKGPQLPP GPRGKI
Sbjct: 121 SPDLLPIKKGPQLPPTPGPRGKI 143
>gi|326490281|dbj|BAJ84804.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 143
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/143 (69%), Positives = 118/143 (82%), Gaps = 2/143 (1%)
Query: 4 LATIAAVQPATIKGLGGSSLAGTKLTVKPTRQ--SFRPKSFKAGAVVAKYGDKSVYFDLE 61
+A++ AVQPA +KGL GSS++G KL V+P+ S + + AVVAKYG+KSVYFDL+
Sbjct: 1 MASLVAVQPAAVKGLSGSSISGRKLAVRPSSAAASRSTRRARGAAVVAKYGEKSVYFDLD 60
Query: 62 DLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSATA 121
D+ NTTGQWDLYGSDA SPYN LQSKFF TFAAPFTKRGLLLKFL++GGGS +AY SA+A
Sbjct: 61 DIANTTGQWDLYGSDAASPYNGLQSKFFNTFAAPFTKRGLLLKFLLIGGGSLVAYVSASA 120
Query: 122 SGDILPIKKGPQLPPKLGPRGKI 144
S D+LPIK+GPQLPP GPRGKI
Sbjct: 121 SPDLLPIKEGPQLPPTPGPRGKI 143
>gi|416274|dbj|BAA04635.1| PSI-H precursor [Nicotiana sylvestris]
Length = 101
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/101 (98%), Positives = 100/101 (99%)
Query: 44 AGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLL 103
AG VVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLL
Sbjct: 1 AGPVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLL 60
Query: 104 KFLILGGGSTLAYFSATASGDILPIKKGPQLPPKLGPRGKI 144
KFLILGGGSTLAYFS+TASGDILPIKKGPQLPPKLGPRGKI
Sbjct: 61 KFLILGGGSTLAYFSSTASGDILPIKKGPQLPPKLGPRGKI 101
>gi|449465272|ref|XP_004150352.1| PREDICTED: photosystem I reaction center subunit VI,
chloroplastic-like [Cucumis sativus]
Length = 123
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/118 (90%), Positives = 115/118 (97%)
Query: 27 KLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQS 86
KL ++P+RQ+FRPK+FKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQS
Sbjct: 6 KLPLRPSRQTFRPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQS 65
Query: 87 KFFETFAAPFTKRGLLLKFLILGGGSTLAYFSATASGDILPIKKGPQLPPKLGPRGKI 144
KFFETFAAPFTKRGLLLKFL+LGGG+TLAYFSATA D+LPIKKGPQLPPKLGPRGKI
Sbjct: 66 KFFETFAAPFTKRGLLLKFLLLGGGATLAYFSATAPDDVLPIKKGPQLPPKLGPRGKI 123
>gi|225442607|ref|XP_002284496.1| PREDICTED: photosystem I reaction center subunit VI, chloroplastic
isoform 1 [Vitis vinifera]
gi|225442613|ref|XP_002284498.1| PREDICTED: photosystem I reaction center subunit VI, chloroplastic
isoform 2 [Vitis vinifera]
gi|359482927|ref|XP_003632861.1| PREDICTED: photosystem I reaction center subunit VI, chloroplastic
[Vitis vinifera]
gi|147865862|emb|CAN78973.1| hypothetical protein VITISV_006187 [Vitis vinifera]
gi|297743260|emb|CBI36127.3| unnamed protein product [Vitis vinifera]
Length = 144
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/144 (83%), Positives = 130/144 (90%)
Query: 1 MASLATIAAVQPATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFDL 60
MASLAT+AAVQP IKGL GSS++GTKL+VKP R+S R + +AGAVVAKYGDKSVYFDL
Sbjct: 1 MASLATLAAVQPINIKGLAGSSISGTKLSVKPARRSLRVGNSRAGAVVAKYGDKSVYFDL 60
Query: 61 EDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120
EDLGNTTGQWD+YGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFL+LGGGS LAY SAT
Sbjct: 61 EDLGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLLLGGGSVLAYVSAT 120
Query: 121 ASGDILPIKKGPQLPPKLGPRGKI 144
AS D LPIKKGPQLPP+ GPRGKI
Sbjct: 121 ASDDYLPIKKGPQLPPQPGPRGKI 144
>gi|115465409|ref|NP_001056304.1| Os05g0560000 [Oryza sativa Japonica Group]
gi|122168800|sp|Q0DG05.1|PSAH_ORYSJ RecName: Full=Photosystem I reaction center subunit VI,
chloroplastic; Short=PSI-H; AltName:
Full=Light-harvesting complex I 11 kDa protein; AltName:
Full=Protein GOS5; Flags: Precursor
gi|158512932|sp|A2Y7D9.1|PSAH_ORYSI RecName: Full=Photosystem I reaction center subunit VI,
chloroplastic; Short=PSI-H; AltName:
Full=Light-harvesting complex I 11 kDa protein; AltName:
Full=Protein GOS5; Flags: Precursor
gi|3885894|gb|AAC78107.1| photosystem-1 H subunit GOS5 [Oryza sativa Japonica Group]
gi|50878331|gb|AAT85106.1| light-harvesting complex I 11 kDa protein [Oryza sativa Japonica
Group]
gi|51854258|gb|AAU10639.1| photosystem I reaction center subunit VI, light-harvesting complex
I 11 kDa protein [Oryza sativa Japonica Group]
gi|113579855|dbj|BAF18218.1| Os05g0560000 [Oryza sativa Japonica Group]
gi|125553290|gb|EAY98999.1| hypothetical protein OsI_20958 [Oryza sativa Indica Group]
gi|215692614|dbj|BAG88034.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765685|dbj|BAG87382.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632537|gb|EEE64669.1| hypothetical protein OsJ_19524 [Oryza sativa Japonica Group]
Length = 142
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 105/146 (71%), Positives = 122/146 (83%), Gaps = 9/146 (6%)
Query: 4 LATIAAVQPATIKGLGGSSLAGTKLTVKPT-----RQSFRPKSFKAGAVVAKYGDKSVYF 58
+A++ AVQP +KGL GSS++G KL V+P+ R + RP++ AVVAKYG+KSVYF
Sbjct: 1 MASLVAVQPVAVKGLAGSSISGRKLAVRPSPRALCRTTRRPRA----AVVAKYGEKSVYF 56
Query: 59 DLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFS 118
DLED+GNTTGQWDLYGSDAPSPYN LQSKFFETFA PFTKRGLLLKFL+LGGGS +AY S
Sbjct: 57 DLEDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAGPFTKRGLLLKFLLLGGGSLVAYVS 116
Query: 119 ATASGDILPIKKGPQLPPKLGPRGKI 144
A+AS D+LPIKKGPQLPP GPRGKI
Sbjct: 117 ASASPDLLPIKKGPQLPPTPGPRGKI 142
>gi|20240|emb|CAA36191.1| GOS5 [Oryza sativa Indica Group]
Length = 142
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 102/146 (69%), Positives = 120/146 (82%), Gaps = 9/146 (6%)
Query: 4 LATIAAVQPATIKGLGGSSLAGTKLTVKPT-----RQSFRPKSFKAGAVVAKYGDKSVYF 58
+A++ AVQP +KGL GSS++G KL V+P+ R + RP++ AVVAKYG+KSVYF
Sbjct: 1 MASLVAVQPVAVKGLAGSSISGRKLAVRPSPRALCRTTRRPRA----AVVAKYGEKSVYF 56
Query: 59 DLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFS 118
DLED+GNTTGQWDLY SDAPSPYN LQSKFFETFA PFTKRGLLLKFL+LGGGS +AY S
Sbjct: 57 DLEDIGNTTGQWDLYASDAPSPYNPLQSKFFETFAGPFTKRGLLLKFLLLGGGSLVAYVS 116
Query: 119 ATASGDILPIKKGPQLPPKLGPRGKI 144
A+AS D+LPIKKGP +PP GPRGKI
Sbjct: 117 ASASPDLLPIKKGPHVPPTPGPRGKI 142
>gi|449516169|ref|XP_004165120.1| PREDICTED: photosystem I reaction center subunit VI,
chloroplastic-like, partial [Cucumis sativus]
Length = 108
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/104 (93%), Positives = 101/104 (97%)
Query: 41 SFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG 100
F+AGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG
Sbjct: 5 CFRAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG 64
Query: 101 LLLKFLILGGGSTLAYFSATASGDILPIKKGPQLPPKLGPRGKI 144
LLLKFL+LGGG+TLAYFSATA D+LPIKKGPQLPPKLGPRGKI
Sbjct: 65 LLLKFLLLGGGATLAYFSATAPDDVLPIKKGPQLPPKLGPRGKI 108
>gi|357132590|ref|XP_003567912.1| PREDICTED: photosystem I reaction center subunit VI,
chloroplastic-like [Brachypodium distachyon]
Length = 145
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/147 (69%), Positives = 119/147 (80%), Gaps = 8/147 (5%)
Query: 4 LATIAAVQP-ATIKGLGGSSLAGTKL--TVKPT---RQSFRPKSFKAGAVVAKYGDKSVY 57
+ ++ AVQP A +KGL GSS++G KL T +P+ R + RP + AV AKYG+KSVY
Sbjct: 1 MVSLVAVQPSAAVKGLAGSSMSGRKLAATARPSSLCRSTRRPA--RGVAVQAKYGEKSVY 58
Query: 58 FDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYF 117
FDL+D+GNTTGQWDLYGSDAPSPYN LQSKFF+TFAAPFTKRGLLLKFL+LGGGS +AY
Sbjct: 59 FDLDDIGNTTGQWDLYGSDAPSPYNGLQSKFFQTFAAPFTKRGLLLKFLLLGGGSLIAYL 118
Query: 118 SATASGDILPIKKGPQLPPKLGPRGKI 144
AT S D+LPIKKGPQLPP GPRGKI
Sbjct: 119 GATTSPDLLPIKKGPQLPPTPGPRGKI 145
>gi|168047946|ref|XP_001776429.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672155|gb|EDQ58696.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 140
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/137 (57%), Positives = 99/137 (72%), Gaps = 1/137 (0%)
Query: 8 AAVQPATIKGLGGSSLAGTKLTVKPTRQ-SFRPKSFKAGAVVAKYGDKSVYFDLEDLGNT 66
AA + GL GSSLAG K + P + S R S + GA+ AKYG+KSVYFDL ++ NT
Sbjct: 3 AASATMAVSGLAGSSLAGQKFAIAPAKSVSVRSPSNRVGAISAKYGEKSVYFDLGEIDNT 62
Query: 67 TGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSATASGDIL 126
TG WDLYG+D P+ YN Q+KFFETFA FTKRGLLLKFL+LGG +T+ Y +T+SGD+L
Sbjct: 63 TGNWDLYGNDDPNRYNGFQNKFFETFAGAFTKRGLLLKFLVLGGATTIGYLGSTSSGDLL 122
Query: 127 PIKKGPQLPPKLGPRGK 143
IK GP+ P +GPRG+
Sbjct: 123 AIKNGPKQAPIMGPRGR 139
>gi|162460533|ref|NP_001104905.1| photosystem I reaction center subunit VI, chloroplastic precursor
[Zea mays]
gi|3914465|sp|O65101.1|PSAH_MAIZE RecName: Full=Photosystem I reaction center subunit VI,
chloroplastic; Short=PSI-H; AltName:
Full=Light-harvesting complex I 11 kDa protein; Flags:
Precursor
gi|2981207|gb|AAC26196.1| photosystem I complex PsaH subunit precursor [Zea mays]
gi|194697992|gb|ACF83080.1| unknown [Zea mays]
gi|195620762|gb|ACG32211.1| hypothetical protein [Zea mays]
gi|195640350|gb|ACG39643.1| hypothetical protein [Zea mays]
gi|238012298|gb|ACR37184.1| unknown [Zea mays]
gi|413946476|gb|AFW79125.1| photosystem I reaction center subunit VI, Precursor [Zea mays]
Length = 142
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/145 (75%), Positives = 124/145 (85%), Gaps = 4/145 (2%)
Query: 1 MASLATIAAVQPATIKGLGGSSLAGTKLTV-KPTRQSFRPKSFKAGAVVAKYGDKSVYFD 59
MASLA ++ V+P IKGL GSS++G KL V +P+ +S R +A AVVAKYGDKSVYFD
Sbjct: 1 MASLAAVS-VKPVAIKGLAGSSISGRKLAVARPSARSIRRP--RAAAVVAKYGDKSVYFD 57
Query: 60 LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSA 119
L+D+GNTTGQWDLYGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFL+LGGGS LAY SA
Sbjct: 58 LDDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLLLGGGSLLAYVSA 117
Query: 120 TASGDILPIKKGPQLPPKLGPRGKI 144
+AS D+LPIKKGPQ PP+ GPRGKI
Sbjct: 118 SASPDLLPIKKGPQEPPQPGPRGKI 142
>gi|242088809|ref|XP_002440237.1| hypothetical protein SORBIDRAFT_09g028260 [Sorghum bicolor]
gi|241945522|gb|EES18667.1| hypothetical protein SORBIDRAFT_09g028260 [Sorghum bicolor]
Length = 147
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/135 (73%), Positives = 111/135 (82%), Gaps = 7/135 (5%)
Query: 1 MASLATIAAVQPATIKGLGGSSLAGTKLTV--KPT---RQSFRPKSFKAGAVVAKYGDKS 55
MASLA +VQP +KGL GSS++G KL V +P+ R + R S + AVVAKYGDKS
Sbjct: 1 MASLAAAVSVQPVAVKGLSGSSISGRKLAVASRPSSSARAACR--STRRAAVVAKYGDKS 58
Query: 56 VYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLA 115
VYFDLED+GNTTGQWDLYGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFL+LGGGS LA
Sbjct: 59 VYFDLEDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLLLGGGSLLA 118
Query: 116 YFSATASGDILPIKK 130
Y SA+AS D+LPIKK
Sbjct: 119 YVSASASPDLLPIKK 133
>gi|168028893|ref|XP_001766961.1| PsaH photosystem I reaction center subunit [Physcomitrella patens
subsp. patens]
gi|162681703|gb|EDQ68127.1| PsaH photosystem I reaction center subunit [Physcomitrella patens
subsp. patens]
Length = 140
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 94/129 (72%)
Query: 15 IKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYG 74
+ GL GSSLAG KL + P++ K G V AKYG+KSVYFDL ++ NTTG WDLYG
Sbjct: 11 VSGLAGSSLAGKKLAIAPSKSVSMRSPSKVGVVSAKYGEKSVYFDLGEIDNTTGNWDLYG 70
Query: 75 SDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSATASGDILPIKKGPQL 134
+D P+ YN Q+KFFETFA FTKRGLLLKFL+LGG +T+ Y +T+S D+L IK GP+
Sbjct: 71 NDDPNRYNGFQNKFFETFAGAFTKRGLLLKFLVLGGATTIGYLGSTSSPDLLAIKNGPKQ 130
Query: 135 PPKLGPRGK 143
P +GPRG+
Sbjct: 131 VPVMGPRGR 139
>gi|118486808|gb|ABK95239.1| unknown [Populus trichocarpa]
Length = 86
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/85 (88%), Positives = 79/85 (92%)
Query: 1 MASLATIAAVQPATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFDL 60
MASLAT AAVQPATIKGLGGSSL+GTKL VKP+RQ RPKS ++GAVVAKYGDKSVYFDL
Sbjct: 1 MASLATFAAVQPATIKGLGGSSLSGTKLHVKPSRQGLRPKSLRSGAVVAKYGDKSVYFDL 60
Query: 61 EDLGNTTGQWDLYGSDAPSPYNSLQ 85
EDLGNTTGQWDLYGSDAPSPYN LQ
Sbjct: 61 EDLGNTTGQWDLYGSDAPSPYNPLQ 85
>gi|255634224|gb|ACU17476.1| unknown [Glycine max]
gi|255638650|gb|ACU19630.1| unknown [Glycine max]
Length = 104
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/94 (74%), Positives = 81/94 (86%)
Query: 1 MASLATIAAVQPATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFDL 60
MASLAT+AAVQPA + GL GSSL+GTKL+ KP+R + + K+F++GAVVAKYGDKSVYFDL
Sbjct: 1 MASLATLAAVQPAALNGLAGSSLSGTKLSFKPSRHTVKSKNFRSGAVVAKYGDKSVYFDL 60
Query: 61 EDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAA 94
EDLGNTTGQWDLYGSDAPSPYN LQ F T A+
Sbjct: 61 EDLGNTTGQWDLYGSDAPSPYNPLQVCCFFTCAS 94
>gi|356566167|ref|XP_003551306.1| PREDICTED: uncharacterized protein LOC100789467 [Glycine max]
Length = 230
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 76/85 (89%), Gaps = 1/85 (1%)
Query: 1 MASLATIAAVQPATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFDL 60
MASLA++ VQP+T+KGL GSSLAGTKL+ KP+RQSFRPK+F +G VVAKYGDKSVYFDL
Sbjct: 1 MASLASLVVVQPSTVKGLAGSSLAGTKLSFKPSRQSFRPKNF-SGVVVAKYGDKSVYFDL 59
Query: 61 EDLGNTTGQWDLYGSDAPSPYNSLQ 85
EDLGNT GQWDLYGSDAPSP N LQ
Sbjct: 60 EDLGNTIGQWDLYGSDAPSPNNPLQ 84
>gi|356541580|ref|XP_003539252.1| PREDICTED: photosystem I reaction center subunit VI,
chloroplastic-like [Glycine max]
Length = 100
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 74/88 (84%)
Query: 1 MASLATIAAVQPATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFDL 60
MASLA++ VQP+TIKGL GSSL GTKL+ KP+ QSFRPK+F+ G VVA YGDKSVYFDL
Sbjct: 1 MASLASLDIVQPSTIKGLAGSSLTGTKLSFKPSHQSFRPKNFRNGVVVANYGDKSVYFDL 60
Query: 61 EDLGNTTGQWDLYGSDAPSPYNSLQSKF 88
EDLGNT GQWDLY DAPSPYN L+ +F
Sbjct: 61 EDLGNTIGQWDLYVFDAPSPYNPLRVRF 88
>gi|302757878|ref|XP_002962362.1| hypothetical protein SELMODRAFT_227307 [Selaginella moellendorffii]
gi|300169223|gb|EFJ35825.1| hypothetical protein SELMODRAFT_227307 [Selaginella moellendorffii]
Length = 140
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/129 (62%), Positives = 93/129 (72%), Gaps = 2/129 (1%)
Query: 17 GLGGSSLAGTKLTVKPTRQ-SFRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGS 75
GL SSL GTKL +KPT Q S R + K G V AKYG+KSVYFDL D+ NTTG WDLYGS
Sbjct: 13 GLASSSLNGTKLRIKPTAQVSMRRSTAKLG-VSAKYGEKSVYFDLGDINNTTGAWDLYGS 71
Query: 76 DAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSATASGDILPIKKGPQLP 135
D PSPYN LQS+FF+ FA FTKRGLLLKFL+L G +A+ A A ++P+K+G P
Sbjct: 72 DTPSPYNGLQSQFFQIFAGAFTKRGLLLKFLLLAGTGAVAFTGANAPASLVPVKRGAVGP 131
Query: 136 PKLGPRGKI 144
P GPRGKI
Sbjct: 132 PTPGPRGKI 140
>gi|302758982|ref|XP_002962914.1| hypothetical protein SELMODRAFT_227329 [Selaginella moellendorffii]
gi|300169775|gb|EFJ36377.1| hypothetical protein SELMODRAFT_227329 [Selaginella moellendorffii]
Length = 140
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/129 (62%), Positives = 93/129 (72%), Gaps = 2/129 (1%)
Query: 17 GLGGSSLAGTKLTVKPTRQ-SFRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGS 75
GL SSL GTKL +KPT Q S R + K G V AKYG+KSVYFDL D+ NTTG WDLYGS
Sbjct: 13 GLASSSLNGTKLRIKPTAQVSMRRSTAKLG-VSAKYGEKSVYFDLGDINNTTGAWDLYGS 71
Query: 76 DAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSATASGDILPIKKGPQLP 135
D PSPYN LQS+FF+ FA FTKRGLLLKFL+L G +A+ A A ++P+K+G P
Sbjct: 72 DMPSPYNGLQSQFFQIFAGAFTKRGLLLKFLLLAGTGAVAFTGANAPASLVPVKRGAVGP 131
Query: 136 PKLGPRGKI 144
P GPRGKI
Sbjct: 132 PTPGPRGKI 140
>gi|357454929|ref|XP_003597745.1| Photosystem I reaction center subunit VI [Medicago truncatula]
gi|355486793|gb|AES67996.1| Photosystem I reaction center subunit VI [Medicago truncatula]
Length = 108
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 75/88 (85%), Gaps = 3/88 (3%)
Query: 1 MASLAT-IAAVQPA--TIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVY 57
MASLAT +A VQPA +KGL GSS+ GTKLT KP+RQ F+ + ++G+VVAKYGDKSVY
Sbjct: 1 MASLATSLACVQPAGLNVKGLAGSSITGTKLTFKPSRQIFKSNNLRSGSVVAKYGDKSVY 60
Query: 58 FDLEDLGNTTGQWDLYGSDAPSPYNSLQ 85
FDLED+GNTTGQWDLYGSDAPSPYN LQ
Sbjct: 61 FDLEDIGNTTGQWDLYGSDAPSPYNPLQ 88
>gi|148907308|gb|ABR16791.1| unknown [Picea sitchensis]
gi|148907801|gb|ABR17026.1| unknown [Picea sitchensis]
Length = 152
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/135 (63%), Positives = 97/135 (71%), Gaps = 5/135 (3%)
Query: 15 IKGLGGSS--LAGTKLTVKPTRQSF--RPKSFKAGAV-VAKYGDKSVYFDLEDLGNTTGQ 69
+ GL SS G KL+V R K +AG V VAKYG+KS+YFDLED+ NTTG
Sbjct: 18 VHGLCSSSSGFNGRKLSVALPRVCAPATSKRKRAGGVAVAKYGEKSIYFDLEDISNTTGA 77
Query: 70 WDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSATASGDILPIK 129
WDLYGSD PSPYN LQSKFFETFA PFTKRGLLLKFL+L GG L Y + A+GDILPI
Sbjct: 78 WDLYGSDTPSPYNPLQSKFFETFAKPFTKRGLLLKFLLLAGGGGLVYAGSNATGDILPIV 137
Query: 130 KGPQLPPKLGPRGKI 144
+GPQ PP LGPR K+
Sbjct: 138 RGPQQPPVLGPREKL 152
>gi|149242534|pdb|2O01|H Chain H, The Structure Of A Plant Photosystem I Supercomplex At 3.4
Angstrom Resolution
Length = 75
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/75 (85%), Positives = 67/75 (89%)
Query: 70 WDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSATASGDILPIK 129
WD+YGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGS L Y SA A D+LPI
Sbjct: 1 WDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSANAPQDVLPIT 60
Query: 130 KGPQLPPKLGPRGKI 144
+GPQ PPKLGPRGKI
Sbjct: 61 RGPQQPPKLGPRGKI 75
>gi|116780874|gb|ABK21857.1| unknown [Picea sitchensis]
gi|116784120|gb|ABK23221.1| unknown [Picea sitchensis]
Length = 154
Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/100 (74%), Positives = 82/100 (82%)
Query: 45 GAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLK 104
G VAKYG+KS+YFDLED+ NTTG WDLYGSD PSPYN LQSKFFETFA PFTKRGLLLK
Sbjct: 55 GVAVAKYGEKSIYFDLEDISNTTGAWDLYGSDTPSPYNPLQSKFFETFAKPFTKRGLLLK 114
Query: 105 FLILGGGSTLAYFSATASGDILPIKKGPQLPPKLGPRGKI 144
FL+L GG L Y + A+GDILPI +GPQ PP LGPR K+
Sbjct: 115 FLLLAGGGGLVYAGSNATGDILPIVRGPQQPPVLGPREKL 154
>gi|303324971|pdb|3LW5|H Chain H, Improved Model Of Plant Photosystem I
Length = 69
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/69 (94%), Positives = 65/69 (94%)
Query: 59 DLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFS 118
DLEDLGNTTGQWD YGSDAPSPYN LQSK FETFAAPFTKRGLLLKFLILGGGSTLAY S
Sbjct: 1 DLEDLGNTTGQWDSYGSDAPSPYNPLQSKLFETFAAPFTKRGLLLKFLILGGGSTLAYLS 60
Query: 119 ATASGDILP 127
ATASGDILP
Sbjct: 61 ATASGDILP 69
>gi|149392485|gb|ABR26045.1| photosystem i reaction center subunit vi [Oryza sativa Indica
Group]
Length = 83
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/83 (85%), Positives = 76/83 (91%)
Query: 62 DLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSATA 121
D+GNTTGQWDLYGSDAPSPYN LQSKFFETFA PFTKRGLLLKFL+LGGGS +AY SA+A
Sbjct: 1 DIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAGPFTKRGLLLKFLLLGGGSLVAYVSASA 60
Query: 122 SGDILPIKKGPQLPPKLGPRGKI 144
S D+LPIKKGPQLPP GPRGKI
Sbjct: 61 SPDLLPIKKGPQLPPTPGPRGKI 83
>gi|384251275|gb|EIE24753.1| photosystem I reaction centre subunit VI [Coccomyxa subellipsoidea
C-169]
Length = 133
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
Query: 35 QSFRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAA 94
Q+ R + A V AKYG S YFDL+DL +TTG W+LYG + Y SLQ++FF AA
Sbjct: 23 QARRTSNRLATPVQAKYGSDSEYFDLDDLEDTTGSWELYGQEDEKRYPSLQAEFFNRAAA 82
Query: 95 PFTKRGLLLKFLILGGGSTLAYFSATASGDI-LPIKKGPQLPPKLGPRGKI 144
P T+R LL F +GG +L + A S D+ LPI++GP+ + GPRGKI
Sbjct: 83 PLTRRESLLAFTFVGGAGSLLLWGAKGSKDVALPIQQGPKKGGEKGPRGKI 133
>gi|307110390|gb|EFN58626.1| hypothetical protein CHLNCDRAFT_140851 [Chlorella variabilis]
Length = 130
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
Query: 47 VVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFL 106
V AKYG++S +FDL+DL NT G WD+YG + + YNSLQS+FFE A T+R +L +
Sbjct: 33 VQAKYGEESRFFDLQDLENTIGSWDMYGQEDKNRYNSLQSEFFERAAGGLTRREYVLGLV 92
Query: 107 ILGGGSTLAYFSATASGDI-LPIKKGPQLPPKLGPRGKI 144
+G LA+ A S D+ LPI GPQ P +GPRG++
Sbjct: 93 AIGAAGILAW-GAKGSADVKLPITVGPQQTPAVGPRGRL 130
>gi|255075737|ref|XP_002501543.1| photosystem I subunit VI, chloroplast precursor [Micromonas sp.
RCC299]
gi|226516807|gb|ACO62801.1| photosystem I subunit VI, chloroplast precursor [Micromonas sp.
RCC299]
Length = 131
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Query: 49 AKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLIL 108
AKYGD+SVYFDL D+ +TTG WD+YG ++ + Y Q KFFE A +R + FL L
Sbjct: 35 AKYGDESVYFDLGDVESTTGSWDVYGVESKARYPDQQEKFFEQAAQGLGRREAMYSFLAL 94
Query: 109 GGGSTLAYFSATASGDI-LPIKKGPQLPPKLGPRGKI 144
G + F A S D LPI GPQ P+LGPR ++
Sbjct: 95 AGPAACLVFGAKGSKDAKLPITVGPQKEPQLGPRDRL 131
>gi|302850724|ref|XP_002956888.1| photosystem I reaction center subunit VI, chloroplast precursor
[Volvox carteri f. nagariensis]
gi|300257769|gb|EFJ42013.1| photosystem I reaction center subunit VI, chloroplast precursor
[Volvox carteri f. nagariensis]
Length = 131
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 35 QSFRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAA 94
Q R + KA V AKYG++S YFDL+DL NTTG WDLYG D Y QSKFF A
Sbjct: 17 QRPRVAARKAVTVRAKYGEQSRYFDLQDLENTTGSWDLYGVDDKKRYPENQSKFFTQAAD 76
Query: 95 PFTKRGLLLKFLILGGGSTLAYFSATASGDI-LPIKKGPQLPPKLGPRGKI 144
++R L F+ L G + +A F + D LPI KGPQ + G G I
Sbjct: 77 ILSRREALRAFVALSGVAAIATFGLKGAKDASLPITKGPQTSGENGKGGAI 127
>gi|145354259|ref|XP_001421408.1| psaH, PSI-H, subunit VI, photosystem I polypeptide [Ostreococcus
lucimarinus CCE9901]
gi|144581645|gb|ABO99701.1| psaH, PSI-H, subunit VI, photosystem I polypeptide [Ostreococcus
lucimarinus CCE9901]
Length = 130
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Query: 35 QSFRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAA 94
+S R + +A AKYGD+SVYFDL D+ TTG WD+YG DA S Y Q+ FFE A
Sbjct: 20 RSTRARRERAMKTNAKYGDESVYFDLSDVEATTGSWDVYGVDASSRYPDQQAAFFEYAAQ 79
Query: 95 PFTKRGLLLKFLILGGG-STLAYFSATASGDILPIKKGPQLPPKLGPRGKI 144
+R + L + G T+ Y A LPI GPQ P +GPR +I
Sbjct: 80 GLGRREAVYSLLAVSAGLLTVGYGVKGAKDAKLPITVGPQQPAVVGPRDRI 130
>gi|412986329|emb|CCO14755.1| unknown [Bathycoccus prasinos]
Length = 135
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Query: 47 VVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFL 106
+ AKYGD+SVYFDL D+ +TTG WD+YG ++ + Y Q+KFFE A +R + FL
Sbjct: 37 ISAKYGDESVYFDLGDVESTTGSWDVYGVESTARYPDQQAKFFENAAQGLGRREAMYSFL 96
Query: 107 ILGGGSTLAYFSATASGDI-LPIKKGPQLPPKLGPRGKI 144
L GG+ F S D LPI GPQ GPR ++
Sbjct: 97 ALSGGAACLVFGGKGSKDAKLPITIGPQKEAVKGPRDRL 135
>gi|74272699|gb|ABA01145.1| chloroplast photosystem 1 11 kDa subunit [Chlamydomonas incerta]
Length = 130
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 38 RPK--SFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAP 95
RP+ + KA V AKYG+ S YFDL+D+ NTTG WD+YG D Y Q+KFF
Sbjct: 17 RPRVAARKAVRVSAKYGENSRYFDLQDMENTTGSWDMYGVDEKKRYPDNQAKFFTQATDI 76
Query: 96 FTKRGLLLKFLILGGGSTLAYFSATASGDI-LPIKKGPQLPPKLGPRGKI 144
++R L + L G + + + + D LPI KGPQ + G G +
Sbjct: 77 ISRRESLRALIALSGVAAIVTYGIKGAKDADLPITKGPQTTGENGKGGSV 126
>gi|303277339|ref|XP_003057963.1| photosystem I subunit VI, chloroplast precursor [Micromonas pusilla
CCMP1545]
gi|226460620|gb|EEH57914.1| photosystem I subunit VI, chloroplast precursor [Micromonas pusilla
CCMP1545]
Length = 128
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 67/125 (53%), Gaps = 7/125 (5%)
Query: 21 SSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSP 80
S+ AG K+ VKP ++ +A A AKYGD+SVYFDL D+ +TTG WD+YG + +
Sbjct: 10 STFAGAKVAVKPVAAR---RASRATAAKAKYGDESVYFDLGDVESTTGAWDVYGEASTAR 66
Query: 81 YNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSATASGDI-LPIKKGPQLPPKLG 139
Y Q FFE +R + FL L G + F + D LPI GPQ LG
Sbjct: 67 YPGQQEAFFEK---GLGRREAMYSFLALAGPAACLVFGGKGAKDAKLPITVGPQKEAPLG 123
Query: 140 PRGKI 144
PR K+
Sbjct: 124 PRDKL 128
>gi|159464799|ref|XP_001690629.1| subunit H of photosystem I [Chlamydomonas reinhardtii]
gi|131195|sp|P13352.1|PSAH_CHLRE RecName: Full=Photosystem I reaction center subunit VI,
chloroplastic; Short=PSI-H; AltName:
Full=Light-harvesting complex I 11 kDa protein; AltName:
Full=P28 protein; Flags: Precursor
gi|18192|emb|CAA33256.1| polypeptide 28 precursor [Chlamydomonas reinhardtii]
gi|158280129|gb|EDP05888.1| subunit H of photosystem I [Chlamydomonas reinhardtii]
gi|227067|prf||1613444A photosystem I P28 protein
Length = 130
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 38 RPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFT 97
R + KA V AKYG+ S YFDL+D+ NTTG WD+YG D Y Q+KFF +
Sbjct: 19 RVAARKAVRVSAKYGENSRYFDLQDMENTTGSWDMYGVDEKKRYPDNQAKFFTQATDIIS 78
Query: 98 KRGLLLKFLILGGGSTLAYFSATASGDI-LPIKKGPQLPPKLGPRGKI 144
+R L + L G + + + + D LPI KGPQ + G G +
Sbjct: 79 RRESLRALVALSGIAAIVTYGLKGAKDADLPITKGPQTTGENGKGGSV 126
>gi|131198|sp|P20121.1|PSAH_PEA RecName: Full=Photosystem I reaction center subunit VI; AltName:
Full=Light-harvesting complex I 11 kDa protein;
AltName: Full=PSI-H
Length = 36
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/36 (91%), Positives = 35/36 (97%)
Query: 50 KYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQ 85
KYGDKSVYFDLED+GNTTGQWDLYGSDAPSPY+ LQ
Sbjct: 1 KYGDKSVYFDLEDIGNTTGQWDLYGSDAPSPYSXLQ 36
>gi|109676330|gb|ABG37647.1| photosystem I reaction center subunit VI [Populus trichocarpa]
Length = 96
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/47 (76%), Positives = 39/47 (82%)
Query: 1 MASLATIAAVQPATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAV 47
MASLAT AAVQPATIKGLGGSSL+GTKL VKP+RQ RPKS + V
Sbjct: 1 MASLATFAAVQPATIKGLGGSSLSGTKLHVKPSRQGLRPKSLRTSGV 47
>gi|145354327|ref|XP_001421439.1| psaH, PSI-H, subunit VI, photosystem I polypeptide [Ostreococcus
lucimarinus CCE9901]
gi|144581676|gb|ABO99732.1| psaH, PSI-H, subunit VI, photosystem I polypeptide, partial
[Ostreococcus lucimarinus CCE9901]
Length = 91
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 49 AKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLIL 108
AKYGD+SVYFDL D+ TTG WD+YG DA S Y Q+ FFE A +R + L +
Sbjct: 6 AKYGDESVYFDLSDVEATTGSWDVYGVDASSRYPDQQAAFFEYAAQGLGRREAVYSLLAV 65
Query: 109 GGG-STLAYFSATASGDILPIKKGPQ 133
G T+ Y A LPI GPQ
Sbjct: 66 SAGLLTVGYGVKGAKDAKLPITVGPQ 91
>gi|308811871|ref|XP_003083243.1| Photosystem I subunit VI, chloroplast precursor (IC)
[Ostreococcus tauri]
gi|116055122|emb|CAL57518.1| Photosystem I subunit VI, chloroplast precursor (IC)
[Ostreococcus tauri]
Length = 104
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 26/33 (78%)
Query: 49 AKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPY 81
AKYGD+SVYFDL D+ TTG WD+YG D+ S Y
Sbjct: 4 AKYGDESVYFDLSDVEATTGSWDVYGVDSASRY 36
>gi|544736|gb|AAB29514.1| PSI-H2=9.2 kda photosystem I psaH product {N-terminal} [Nicotiana
tabacum, leaves, Peptide Chloroplast Partial, 24 aa]
Length = 24
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/24 (91%), Positives = 22/24 (91%)
Query: 50 KYGDKSVYFDLEDLGNTTGQWDLY 73
KYGDKSVYFDLEDLGNTTGQ D Y
Sbjct: 1 KYGDKSVYFDLEDLGNTTGQXDXY 24
>gi|544735|gb|AAB29513.1| PSI-H2=9 kda photosystem I psaH product {N-terminal} [Nicotiana
tabacum, leaves, Peptide Chloroplast Partial, 24 aa]
Length = 24
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/24 (87%), Positives = 21/24 (87%)
Query: 50 KYGDKSVYFDLEDLGNTTGQWDLY 73
KYGDKSVYFDLEDL NTTGQ D Y
Sbjct: 1 KYGDKSVYFDLEDLANTTGQXDXY 24
>gi|1172666|sp|P42050.1|PSAH_CUCSA RecName: Full=Photosystem I reaction center subunit VI,
chloroplastic; Short=PSI-H; AltName: Full=PS I subunit
9B; AltName: Full=Photosystem I 7.6 kDa protein
gi|234771|gb|AAB19688.1| PS I complex subunit 9b [cucumbers, Peptide Chloroplast Partial,
24 aa]
Length = 24
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 17/23 (73%), Positives = 17/23 (73%)
Query: 51 YGDKSVYFDLEDLGNTTGQWDLY 73
Y DKSVYFDLED GNT GQ Y
Sbjct: 2 YXDKSVYFDLEDKGNTXGQXXXY 24
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,339,689,994
Number of Sequences: 23463169
Number of extensions: 95075889
Number of successful extensions: 209821
Number of sequences better than 100.0: 69
Number of HSP's better than 100.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 209720
Number of HSP's gapped (non-prelim): 69
length of query: 144
length of database: 8,064,228,071
effective HSP length: 108
effective length of query: 36
effective length of database: 9,825,173,115
effective search space: 353706232140
effective search space used: 353706232140
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)