Query 032245
Match_columns 144
No_of_seqs 32 out of 34
Neff 2.3
Searched_HMMs 13730
Date Mon Mar 25 18:45:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032245.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032245hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1bg2a_ c.37.1.9 (A:) Kinesin 41.1 15 0.0011 27.0 4.3 42 72-125 49-90 (323)
2 d1q25a2 b.64.1.1 (A:130-280) C 39.8 6.2 0.00045 26.0 1.8 23 55-77 14-36 (151)
3 d1u2ka_ a.93.1.3 (A:) Catalase 38.5 3.5 0.00026 31.4 0.3 16 83-98 267-282 (292)
4 d1ub2a2 a.93.1.3 (A:427-720) C 28.1 8.6 0.00062 29.3 1.0 16 83-98 269-284 (294)
5 d1h6ya_ b.18.1.7 (A:) Xylan-bi 24.8 19 0.0014 22.1 2.1 22 54-76 4-25 (157)
6 d1goja_ c.37.1.9 (A:) Kinesin 23.4 74 0.0054 23.4 5.6 37 83-125 58-94 (354)
7 d1q25a3 b.64.1.1 (A:281-432) C 23.4 8.1 0.00059 24.9 0.0 25 55-79 18-42 (152)
8 d2j0na1 a.250.1.1 (A:144-314) 22.7 2.7 0.0002 30.7 -2.8 40 47-88 94-140 (171)
9 d2zfia1 c.37.1.9 (A:4-352) Kin 22.6 1.2E+02 0.0086 22.1 6.7 48 72-125 52-101 (349)
10 d1itka2 a.93.1.3 (A:424-731) C 21.2 11 0.00081 29.0 0.4 16 83-98 283-298 (308)
11 d2euta1 a.93.1.1 (A:4-294) Cyt 20.9 9 0.00066 29.0 -0.2 18 81-98 248-265 (291)
12 d1bgpa_ a.93.1.1 (A:) Plant pe 20.3 9.5 0.00069 28.9 -0.2 19 81-99 266-284 (309)
13 d1qgja_ a.93.1.1 (A:) Plant pe 20.0 9.6 0.0007 28.9 -0.2 19 81-99 262-280 (300)
No 1
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.12 E-value=15 Score=27.03 Aligned_cols=42 Identities=21% Similarity=0.331 Sum_probs=30.6
Q ss_pred eeccCCCCCCChhHHHHHHHhhccchhhHHHHHHHHHhCCceEEEeecccCCcc
Q 032245 72 LYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSATASGDI 125 (144)
Q Consensus 72 lYGsDaps~Yn~lQskFFe~fA~~ftkR~lllkfl~LgG~~~l~y~ga~as~D~ 125 (144)
+|+.|+ -|+++|+....|+- .-++=|--++|..+|.++||--
T Consensus 49 vf~~~~------~q~~vf~~~~~~lv------~~~l~G~n~~i~aYGqtgSGKT 90 (323)
T d1bg2a_ 49 VFQSST------SQEQVYNDCAKKIV------KDVLEGYNGTIFAYGQTSSGKT 90 (323)
T ss_dssp EECTTC------CHHHHHHHHTHHHH------HHHHTTCCEEEEEECSTTSSHH
T ss_pred EECCCC------CHHHHHHHHHHHHH------HHHHcCCCcceeeecccCCCCc
Confidence 566554 49999999888762 2233566678999999998854
No 2
>d1q25a2 b.64.1.1 (A:130-280) Cation-independent mannose-6-phosphate receptor (MIR-receptor) {Cow (Bos taurus) [TaxId: 9913]}
Probab=39.79 E-value=6.2 Score=25.97 Aligned_cols=23 Identities=30% Similarity=0.291 Sum_probs=19.3
Q ss_pred eeeeeccCCCCCcccceeeccCC
Q 032245 55 SVYFDLEDLGNTTGQWDLYGSDA 77 (144)
Q Consensus 55 SvYFDL~Di~nTTG~WDlYGsDa 77 (144)
.-.|||.-|-+.++.|.+..+|.
T Consensus 14 g~~fDLspL~~~~~~~~~~~~~~ 36 (151)
T d1q25a2 14 LKKHDLNPLIKTSGAYLVDDSDP 36 (151)
T ss_dssp CCEEECGGGCCSSBCEECBCSCS
T ss_pred CCEEeCchhhccCCCEEEecCCC
Confidence 45799999999999999877653
No 3
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]}
Probab=38.52 E-value=3.5 Score=31.43 Aligned_cols=16 Identities=31% Similarity=0.600 Sum_probs=13.9
Q ss_pred hhHHHHHHHhhccchh
Q 032245 83 SLQSKFFETFAAPFTK 98 (144)
Q Consensus 83 ~lQskFFe~fA~~ftk 98 (144)
+.|.+||+.||..+.|
T Consensus 267 dnq~~Ff~dFa~A~~K 282 (292)
T d1u2ka_ 267 DAHEKFVKDFVAAWVK 282 (292)
T ss_dssp SCHHHHHHHHHHHHHH
T ss_pred CCHhHHHHHHHHHHHH
Confidence 4699999999998876
No 4
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]}
Probab=28.08 E-value=8.6 Score=29.31 Aligned_cols=16 Identities=38% Similarity=0.605 Sum_probs=13.9
Q ss_pred hhHHHHHHHhhccchh
Q 032245 83 SLQSKFFETFAAPFTK 98 (144)
Q Consensus 83 ~lQskFFe~fA~~ftk 98 (144)
..|.+||+.||..+.|
T Consensus 269 enqd~Ff~dFa~A~~K 284 (294)
T d1ub2a2 269 DNKEKFVRDFVAAWTK 284 (294)
T ss_dssp TCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4599999999998877
No 5
>d1h6ya_ b.18.1.7 (A:) Xylan-binding domain {Clostridium thermocellum [TaxId: 1515]}
Probab=24.79 E-value=19 Score=22.09 Aligned_cols=22 Identities=23% Similarity=0.703 Sum_probs=17.5
Q ss_pred eeeeeeccCCCCCcccceeeccC
Q 032245 54 KSVYFDLEDLGNTTGQWDLYGSD 76 (144)
Q Consensus 54 kSvYFDL~Di~nTTG~WDlYGsD 76 (144)
+.++|+ ++.||-++.|..+|..
T Consensus 4 ~~~~~n-~~FE~G~~gW~~~g~~ 25 (157)
T d1h6ya_ 4 NGYYYH-DTFEGSVGQWTARGPA 25 (157)
T ss_dssp TSEEEE-ECCSSCCTTCEEESSC
T ss_pred CccEEc-CcccCCCCCeEECCCC
Confidence 345677 8999999999998864
No 6
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=23.44 E-value=74 Score=23.37 Aligned_cols=37 Identities=22% Similarity=0.275 Sum_probs=26.7
Q ss_pred hhHHHHHHHhhccchhhHHHHHHHHHhCCceEEEeecccCCcc
Q 032245 83 SLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSATASGDI 125 (144)
Q Consensus 83 ~lQskFFe~fA~~ftkR~lllkfl~LgG~~~l~y~ga~as~D~ 125 (144)
..|..+|+..+.|+- -. ++=|--++|..+|.++||--
T Consensus 58 ~~q~~vy~~~~~plv-----~~-~l~G~n~ti~aYG~tgSGKT 94 (354)
T d1goja_ 58 CKQSDIFDFSIKPTV-----DD-ILNGYNGTVFAYGQTGAGKS 94 (354)
T ss_dssp CCHHHHHHHHTHHHH-----HH-HTTTCCEEEEEECSTTSSHH
T ss_pred CCHHHHHHHHHHHHH-----HH-hhccCceeEEecccCCCCcc
Confidence 469999999887753 22 33455568888999998754
No 7
>d1q25a3 b.64.1.1 (A:281-432) Cation-independent mannose-6-phosphate receptor (MIR-receptor) {Cow (Bos taurus) [TaxId: 9913]}
Probab=23.42 E-value=8.1 Score=24.88 Aligned_cols=25 Identities=20% Similarity=0.268 Sum_probs=19.7
Q ss_pred eeeeeccCCCCCcccceeeccCCCC
Q 032245 55 SVYFDLEDLGNTTGQWDLYGSDAPS 79 (144)
Q Consensus 55 SvYFDL~Di~nTTG~WDlYGsDaps 79 (144)
...|||.-|.+.+|.|+.+-.+...
T Consensus 18 ~~~~DLspL~~~~~~~~~~~~~~~~ 42 (152)
T d1q25a3 18 DVAVDLQPLSRVEASDSLFYTSEAD 42 (152)
T ss_dssp SSCEECGGGSCCCTTSCSSEEEECS
T ss_pred CceEECCccccCCCCCceEEEeCCC
Confidence 4679999999999999876554443
No 8
>d2j0na1 a.250.1.1 (A:144-314) Invasin IpaD {Shigella flexneri [TaxId: 623]}
Probab=22.65 E-value=2.7 Score=30.73 Aligned_cols=40 Identities=23% Similarity=0.322 Sum_probs=28.4
Q ss_pred eEeeeCCeeeeeeccC-------CCCCcccceeeccCCCCCCChhHHHH
Q 032245 47 VVAKYGDKSVYFDLED-------LGNTTGQWDLYGSDAPSPYNSLQSKF 88 (144)
Q Consensus 47 v~AKYGdkSvYFDL~D-------i~nTTG~WDlYGsDaps~Yn~lQskF 88 (144)
|.++=|+--||||+.. +.++-|.||. .-+...|+.+|+.|
T Consensus 94 v~~~~g~~~I~~d~~pi~~~~~s~~~~~~~~~~--~l~~a~yqaw~a~f 140 (171)
T d2j0na1 94 VSQKNGGYVVSINMTPIDNMLKSLDNLGGNGEV--VLDNAKYQAWNAGF 140 (171)
T ss_dssp EEEETTEEEEEECCHHHHHHHHHHHHSCCSSEE--EEEHHHHHHHHHHH
T ss_pred EEccCCceEEEeCchHHHHHHHhccCCCCCCcc--cccHHHHHHHHHHH
Confidence 5555566579999755 5566677765 44567799999888
No 9
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=22.57 E-value=1.2e+02 Score=22.11 Aligned_cols=48 Identities=13% Similarity=0.165 Sum_probs=33.3
Q ss_pred eeccCCC--CCCChhHHHHHHHhhccchhhHHHHHHHHHhCCceEEEeecccCCcc
Q 032245 72 LYGSDAP--SPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSATASGDI 125 (144)
Q Consensus 72 lYGsDap--s~Yn~lQskFFe~fA~~ftkR~lllkfl~LgG~~~l~y~ga~as~D~ 125 (144)
+|+++.. ..+..-|.+.|+..+.|+-. .++-|=-++|..+|.++||--
T Consensus 52 vf~~~~~~~~~~~~sQ~~vy~~~~~plv~------~~l~G~n~ti~aYGqTgSGKT 101 (349)
T d2zfia1 52 SYWSHTSPEDINYASQKQVYRDIGEEMLQ------HAFEGYNVCIFAYGQTGAGKS 101 (349)
T ss_dssp EEECSSCTTSSSCCCHHHHHHHTHHHHHH------HHHTTCCEEEEEECSTTSSHH
T ss_pred EeCCCCCccccccccHHHHHHHhhHHHHH------HHHhccCceeeeeccCCCCCc
Confidence 5666543 34566799999998888543 233355568888899998754
No 10
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=21.25 E-value=11 Score=29.03 Aligned_cols=16 Identities=19% Similarity=0.459 Sum_probs=14.4
Q ss_pred hhHHHHHHHhhccchh
Q 032245 83 SLQSKFFETFAAPFTK 98 (144)
Q Consensus 83 ~lQskFFe~fA~~ftk 98 (144)
+.|.+||+.||..+.|
T Consensus 283 d~q~~Ff~DFa~A~~K 298 (308)
T d1itka2 283 DAEKKLVHDFVDTWSK 298 (308)
T ss_dssp TCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 6799999999998877
No 11
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.89 E-value=9 Score=29.01 Aligned_cols=18 Identities=44% Similarity=0.816 Sum_probs=14.3
Q ss_pred CChhHHHHHHHhhccchh
Q 032245 81 YNSLQSKFFETFAAPFTK 98 (144)
Q Consensus 81 Yn~lQskFFe~fA~~ftk 98 (144)
|-..|.+||+.||..+.|
T Consensus 248 yA~d~~~F~~dFa~Am~K 265 (291)
T d2euta1 248 YANDQDKFFKDFSKAFEK 265 (291)
T ss_dssp HHHCHHHHHHHHHHHHHH
T ss_pred HhhCHHHHHHHHHHHHHH
Confidence 334589999999988776
No 12
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]}
Probab=20.26 E-value=9.5 Score=28.86 Aligned_cols=19 Identities=32% Similarity=0.585 Sum_probs=15.4
Q ss_pred CChhHHHHHHHhhccchhh
Q 032245 81 YNSLQSKFFETFAAPFTKR 99 (144)
Q Consensus 81 Yn~lQskFFe~fA~~ftkR 99 (144)
|-..|..||+.||+.+.|=
T Consensus 266 yA~d~~~F~~~Fa~Am~Km 284 (309)
T d1bgpa_ 266 FAQSQQDFFEQFGVSIGKM 284 (309)
T ss_dssp HHHCHHHHHHHHHHHHHHH
T ss_pred HhhCHHHHHHHHHHHHHHH
Confidence 5466999999999987773
No 13
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]}
Probab=20.02 E-value=9.6 Score=28.89 Aligned_cols=19 Identities=32% Similarity=0.597 Sum_probs=15.3
Q ss_pred CChhHHHHHHHhhccchhh
Q 032245 81 YNSLQSKFFETFAAPFTKR 99 (144)
Q Consensus 81 Yn~lQskFFe~fA~~ftkR 99 (144)
|-..|..||+.|+..+.|=
T Consensus 262 yA~d~~~Ff~~Fa~Am~KL 280 (300)
T d1qgja_ 262 YSRSQSLFFRDFTCAMIRM 280 (300)
T ss_dssp HHHCHHHHHHHHHHHHHHH
T ss_pred HhhCHHHHHHHHHHHHHHH
Confidence 4456999999999987773
Done!