Query 032246
Match_columns 144
No_of_seqs 154 out of 1113
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 18:46:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032246.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032246hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ip4_C Aspartyl/glutamyl-tRNA( 99.9 3.8E-23 1.3E-27 149.6 8.4 68 55-122 1-69 (100)
2 3h0l_C Glutamyl-tRNA(Gln) amid 99.9 8E-22 2.7E-26 141.1 7.3 65 57-122 1-66 (94)
3 3kfu_G Glutamyl-tRNA(Gln) amid 99.8 4.4E-20 1.5E-24 131.9 7.8 62 56-122 4-65 (92)
4 3al0_C Glutamyl-tRNA(Gln) amid 99.7 4E-18 1.4E-22 153.9 5.5 69 55-123 2-71 (592)
5 2lv7_A Calcium-binding protein 59.9 5.4 0.00019 26.9 2.4 44 42-86 38-81 (100)
6 3i5g_B Myosin regulatory light 49.1 14 0.00048 26.0 3.2 42 42-84 87-128 (153)
7 3j04_B Myosin regulatory light 48.1 19 0.00065 23.6 3.6 43 42-85 78-120 (143)
8 3a1k_A Amidase; AS family enzy 47.1 17 0.00058 31.8 4.0 45 56-100 4-48 (521)
9 1tiz_A Calmodulin-related prot 46.8 31 0.0011 19.7 4.0 30 56-85 16-45 (67)
10 2ovk_B RLC, myosin regulatory 46.4 26 0.00089 23.4 4.1 42 44-86 89-130 (153)
11 2lhi_A Calmodulin, serine/thre 45.3 34 0.0011 24.5 4.8 42 44-86 88-129 (176)
12 2b1u_A Calmodulin-like protein 44.2 15 0.00053 21.4 2.4 38 46-84 12-49 (71)
13 3deu_A Transcriptional regulat 44.1 23 0.00078 25.2 3.7 28 73-100 139-166 (166)
14 2d8n_A Recoverin; structural g 43.8 44 0.0015 23.6 5.2 30 57-88 15-44 (207)
15 1ggw_A Protein (CDC4P); light 43.4 21 0.00073 23.4 3.2 39 45-84 81-119 (140)
16 2kn2_A Calmodulin; S MAPK phos 43.3 37 0.0013 21.0 4.2 31 56-86 24-54 (92)
17 1h8b_A ACT-EF34, alpha-actinin 42.6 20 0.00069 23.5 3.0 26 53-85 21-46 (75)
18 1taf_B TFIID TBP associated fa 42.0 74 0.0025 21.1 6.4 41 54-94 3-44 (70)
19 2jjz_A Ionized calcium-binding 40.8 55 0.0019 22.7 5.2 45 42-87 52-96 (150)
20 1s6j_A CDPK, calcium-dependent 40.8 33 0.0011 20.9 3.7 39 46-85 29-67 (87)
21 2kz2_A Calmodulin, CAM; TR2C, 40.3 52 0.0018 21.0 4.7 41 44-85 33-73 (94)
22 3o0r_C Nitric oxide reductase 40.2 24 0.00083 24.4 3.2 24 84-107 120-143 (146)
23 1k2h_A S100A1, S-100 protein, 39.7 56 0.0019 20.1 4.7 31 57-87 27-62 (93)
24 1avs_A Troponin C; muscle cont 39.6 45 0.0015 20.6 4.2 38 47-85 27-64 (90)
25 2qac_A Myosin A tail domain in 39.0 30 0.001 22.9 3.4 42 44-86 88-129 (146)
26 3i5g_C Myosin catalytic light 38.0 27 0.00094 24.7 3.3 40 46-86 91-130 (159)
27 2d58_A Allograft inflammatory 37.3 49 0.0017 21.3 4.3 44 42-86 34-77 (107)
28 1exr_A Calmodulin; high resolu 36.3 65 0.0022 21.4 4.8 40 45-85 88-127 (148)
29 2mys_B Myosin; muscle protein, 35.5 46 0.0016 22.5 4.0 41 45-86 100-140 (166)
30 4ds7_A Calmodulin, CAM; protei 35.3 54 0.0018 21.2 4.2 40 46-86 90-129 (147)
31 2ktg_A Calmodulin, putative; e 34.8 31 0.001 20.9 2.8 40 46-86 20-59 (85)
32 4gyt_A Uncharacterized protein 34.5 30 0.001 26.2 3.1 36 59-94 134-170 (194)
33 2joj_A Centrin protein; N-term 34.1 36 0.0012 20.1 2.9 30 56-85 22-51 (77)
34 2gxg_A 146AA long hypothetical 33.8 1E+02 0.0035 20.4 5.6 30 68-97 116-145 (146)
35 3bpv_A Transcriptional regulat 33.7 95 0.0032 20.4 5.3 27 70-96 111-137 (138)
36 2fji_1 Exocyst complex compone 33.3 74 0.0025 26.4 5.6 53 57-110 338-390 (399)
37 3a1y_A 50S ribosomal protein P 33.0 61 0.0021 20.6 4.0 32 56-87 15-46 (58)
38 3qrx_A Centrin; calcium-bindin 32.9 79 0.0027 21.1 4.9 40 46-86 107-146 (169)
39 3k0l_A Repressor protein; heli 32.6 47 0.0016 23.1 3.7 31 71-101 129-159 (162)
40 3ox6_A Calcium-binding protein 32.6 78 0.0027 20.5 4.7 40 46-86 94-134 (153)
41 3rm1_A Protein S100-B; alpha-h 32.2 67 0.0023 20.5 4.2 31 56-86 26-61 (92)
42 2obh_A Centrin-2; DNA repair c 31.5 87 0.003 20.8 4.9 41 44-85 83-123 (143)
43 4hbl_A Transcriptional regulat 31.3 51 0.0017 22.5 3.7 28 71-98 121-148 (149)
44 2lmt_A Calmodulin-related prot 31.2 64 0.0022 21.8 4.2 39 46-85 89-127 (148)
45 4aik_A Transcriptional regulat 31.0 1E+02 0.0035 21.5 5.4 28 71-98 115-142 (151)
46 1wdc_B Scallop myosin; calcium 30.9 39 0.0013 22.5 3.0 41 45-86 92-132 (156)
47 2lbf_B 60S acidic ribosomal pr 30.3 46 0.0016 22.1 3.2 31 57-87 18-48 (70)
48 2lnk_A Protein S100-A4; EF-han 30.2 41 0.0014 23.4 3.1 43 44-86 26-74 (113)
49 2bl0_C Myosin regulatory light 29.6 70 0.0024 20.7 4.0 39 46-85 85-123 (142)
50 3nso_A Protein S100-A3; EF-han 29.3 73 0.0025 21.6 4.2 32 56-87 27-63 (101)
51 2p1m_A SKP1-like protein 1A; F 29.2 34 0.0012 25.1 2.6 28 58-86 128-155 (160)
52 1nya_A Calerythrin; EF-hand, m 29.1 1.3E+02 0.0044 20.0 6.2 43 47-90 14-60 (176)
53 1wy9_A Allograft inflammatory 28.8 75 0.0026 21.9 4.3 44 42-86 50-93 (147)
54 1wlz_A DJBP, CAP-binding prote 28.2 50 0.0017 20.9 3.0 40 46-86 30-69 (105)
55 1k94_A Grancalcin; penta-EF-ha 27.9 1.1E+02 0.0039 20.5 5.0 41 45-86 75-115 (165)
56 5pal_A Parvalbumin; calcium-bi 27.6 75 0.0026 20.0 3.8 40 46-86 47-89 (109)
57 2sas_A Sarcoplasmic calcium-bi 27.2 1E+02 0.0035 20.6 4.7 35 56-90 24-62 (185)
58 2kgr_A Intersectin-1; structur 27.1 45 0.0015 22.5 2.7 39 45-86 19-57 (111)
59 2wuj_A Septum site-determining 26.9 16 0.00056 23.1 0.4 36 56-91 1-37 (57)
60 3nrv_A Putative transcriptiona 26.6 1.2E+02 0.004 20.3 4.9 26 71-96 123-148 (148)
61 2lbf_A 60S acidic ribosomal pr 26.6 55 0.0019 21.6 3.0 31 56-86 21-51 (69)
62 2opw_A Phyhd1 protein; double- 26.5 54 0.0019 25.2 3.5 38 55-92 1-42 (291)
63 3ox6_A Calcium-binding protein 26.5 1.2E+02 0.004 19.6 4.7 31 56-86 26-56 (153)
64 1rwy_A Parvalbumin alpha; EF-h 26.2 82 0.0028 19.8 3.8 40 46-86 47-89 (109)
65 1k9u_A Polcalcin PHL P 7; poll 25.8 69 0.0024 18.9 3.2 28 57-85 19-46 (78)
66 2e9x_A DNA replication complex 25.3 1.1E+02 0.0037 22.3 4.8 31 73-103 105-138 (149)
67 2jnf_A Troponin C; stretch act 25.3 91 0.0031 20.5 4.1 38 48-86 99-136 (158)
68 2veb_A Protoglobin; hemoprotei 25.2 74 0.0025 25.1 4.0 35 49-85 11-45 (195)
69 1juo_A Sorcin; calcium-binding 25.0 67 0.0023 22.6 3.5 41 44-85 107-147 (198)
70 1w7j_B Myosin light chain 1; m 25.0 32 0.0011 22.7 1.6 38 45-83 92-129 (151)
71 3boq_A Transcriptional regulat 24.7 1.1E+02 0.0036 20.8 4.4 28 72-99 132-159 (160)
72 3s2w_A Transcriptional regulat 24.3 1.3E+02 0.0044 20.6 4.8 24 73-96 135-158 (159)
73 3h4s_E KCBP interacting Ca2+-b 24.3 95 0.0032 20.9 4.0 43 43-86 43-86 (135)
74 3ll8_B Calcineurin subunit B t 24.2 1.5E+02 0.0051 19.2 5.0 38 47-85 82-120 (155)
75 1wdc_C Scallop myosin; calcium 24.2 71 0.0024 21.1 3.3 40 45-85 89-128 (156)
76 2opo_A Polcalcin CHE A 3; calc 24.0 76 0.0026 19.2 3.2 29 57-86 27-55 (86)
77 1pva_A Parvalbumin; calcium bi 23.9 81 0.0028 19.8 3.5 41 45-86 47-90 (110)
78 2h5n_A Hypothetical protein PG 23.7 97 0.0033 21.9 4.1 31 57-87 34-65 (133)
79 1bu3_A Calcium-binding protein 23.6 93 0.0032 19.6 3.7 39 46-85 48-89 (109)
80 1eh2_A EPS15; calcium binding, 23.5 1E+02 0.0036 20.8 4.1 38 43-84 18-55 (106)
81 2ccm_A Calexcitin; EF hand, ca 23.5 1.8E+02 0.0062 19.8 5.7 43 50-93 23-69 (191)
82 1top_A Troponin C; contractIle 23.0 1.3E+02 0.0045 19.7 4.5 40 46-86 102-141 (162)
83 2pvb_A Protein (parvalbumin); 22.9 85 0.0029 19.7 3.4 40 45-85 46-88 (108)
84 3fs7_A Parvalbumin, thymic; ca 22.7 82 0.0028 19.8 3.3 40 45-85 47-89 (109)
85 1c7v_A CAVP, calcium vector pr 22.5 59 0.002 19.4 2.4 30 57-86 24-54 (81)
86 3bj6_A Transcriptional regulat 21.9 1.3E+02 0.0046 20.0 4.4 26 72-97 124-149 (152)
87 3v5w_G G gamma-I, guanine nucl 21.5 76 0.0026 21.7 3.0 53 57-122 19-73 (77)
88 1qjt_A EH1, epidermal growth f 21.3 1E+02 0.0036 20.2 3.7 36 47-85 18-53 (99)
89 3bdd_A Regulatory protein MARR 21.3 1.4E+02 0.0049 19.5 4.4 25 72-96 116-140 (142)
90 1yx7_A Calsensin, LAN3-6 antig 21.2 1E+02 0.0035 18.3 3.4 28 56-83 22-51 (83)
91 1uhk_A Aequorin 2, aequorin; E 21.1 86 0.0029 21.4 3.3 39 47-86 116-154 (191)
92 4ioe_A Secreted protein ESXB; 21.1 1.4E+02 0.0048 18.8 4.2 12 57-68 8-19 (93)
93 2f5j_A Mortality factor 4-like 21.0 1.1E+02 0.0038 23.2 4.2 28 69-96 124-151 (181)
94 3n22_A Protein S100-A2; EF-han 20.9 99 0.0034 20.5 3.5 31 56-86 28-63 (98)
95 2olt_A Hypothetical protein; s 20.9 66 0.0023 24.2 2.9 38 59-96 66-103 (227)
96 3fx7_A Putative uncharacterize 20.8 1.1E+02 0.0038 21.6 3.8 24 70-93 2-25 (94)
97 1m45_A MLC1P, myosin light cha 20.7 46 0.0016 21.8 1.8 30 57-86 20-49 (148)
98 2mys_C Myosin; muscle protein, 20.4 1.7E+02 0.0059 18.7 4.6 31 56-86 23-53 (149)
99 1z91_A Organic hydroperoxide r 20.2 1E+02 0.0036 20.5 3.5 31 62-94 114-144 (147)
100 3fwb_A Cell division control p 20.1 1.5E+02 0.005 19.4 4.2 41 45-86 28-68 (161)
101 3mse_B Calcium-dependent prote 20.1 1.2E+02 0.004 21.1 3.9 37 47-86 115-151 (180)
No 1
>3ip4_C Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} SCOP: a.137.12.1 PDB: 2df4_C 2dqn_C* 2g5h_C 2g5i_C* 2f2a_C
Probab=99.89 E-value=3.8e-23 Score=149.56 Aligned_cols=68 Identities=22% Similarity=0.430 Sum_probs=65.0
Q ss_pred CCCCChhHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccCC-CCCCCCCCCccc
Q 032246 55 RSSLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRA-GFKNPFQPPFFF 122 (144)
Q Consensus 55 ~M~Is~EeVkkLA~LARL~L~EEEle~l~~eLn~IL~~~d~L~eVDTegVEPm~hp-~~~NvLREDv~~ 122 (144)
||+||+++|+|||+||||+|+|+|++.+.++|++|++||++|++|||+||+||+|+ +..|+||||++.
T Consensus 1 Mm~i~~e~v~~iA~LArL~l~eeE~~~~~~~l~~Il~~ve~L~evDt~~VeP~~~~~~~~~~lReD~v~ 69 (100)
T 3ip4_C 1 MTKVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAI 69 (100)
T ss_dssp --CCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHGGGGGSCCTTCCCCSCCSCCCCCCBCSCCC
T ss_pred CCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccccccCCCCCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999 999999999986
No 2
>3h0l_C Glutamyl-tRNA(Gln) amidotransferase subunit C; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_C 3h0r_C*
Probab=99.85 E-value=8e-22 Score=141.07 Aligned_cols=65 Identities=23% Similarity=0.451 Sum_probs=62.7
Q ss_pred CCChhHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccCC-CCCCCCCCCccc
Q 032246 57 SLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRA-GFKNPFQPPFFF 122 (144)
Q Consensus 57 ~Is~EeVkkLA~LARL~L~EEEle~l~~eLn~IL~~~d~L~eVDTegVEPm~hp-~~~NvLREDv~~ 122 (144)
+||+++|+|||+||||+++|+|++.+.++|++|++||++|+++||+||+||+|+ +. |+||||++.
T Consensus 1 ~i~~e~v~~iA~LArL~l~eee~~~~~~~l~~Il~~ve~L~evDt~~VeP~~~~~~~-~~lReD~v~ 66 (94)
T 3h0l_C 1 MVDREWVLKIAKLARLELKEEEIEVFQKQLSDILDFIDQLKELDTENVEPYIQEFEE-TPMREDEPH 66 (94)
T ss_dssp -CCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTTGGGSCCTTCCCCCCCCSS-CCCBCSCCC
T ss_pred CCCHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCcCcccCcccc-cCCCCCCCC
Confidence 489999999999999999999999999999999999999999999999999999 88 999999986
No 3
>3kfu_G Glutamyl-tRNA(Gln) amidotransferase subunit C; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus}
Probab=99.81 E-value=4.4e-20 Score=131.89 Aligned_cols=62 Identities=18% Similarity=0.282 Sum_probs=59.4
Q ss_pred CCCChhHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccCCCCCCCCCCCccc
Q 032246 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRAGFKNPFQPPFFF 122 (144)
Q Consensus 56 M~Is~EeVkkLA~LARL~L~EEEle~l~~eLn~IL~~~d~L~eVDTegVEPm~hp~~~NvLREDv~~ 122 (144)
|+||+++|+|||+||||+++|+|++.++++|++|++|+++|++|||+||+| ..|+||||++.
T Consensus 4 M~i~~e~V~~iA~LArL~l~eeE~~~~~~~l~~Il~~ve~L~evDt~~VeP-----~~~~lReD~v~ 65 (92)
T 3kfu_G 4 MELSPELLRKLETLAKIRLSPEEEALLLQDLKRILDFVDALPRVEEGGAEE-----ALGRLREDEPR 65 (92)
T ss_dssp -CCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCC-----CCCCCBCSCCC
T ss_pred CccCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-----CcCCCCCCCCC
Confidence 789999999999999999999999999999999999999999999999999 68999999985
No 4
>3al0_C Glutamyl-tRNA(Gln) amidotransferase subunit C, GL tRNA synthetase 2; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima}
Probab=99.71 E-value=4e-18 Score=153.92 Aligned_cols=69 Identities=17% Similarity=0.274 Sum_probs=65.3
Q ss_pred CCCCChhHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccCC-CCCCCCCCCcccc
Q 032246 55 RSSLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRA-GFKNPFQPPFFFW 123 (144)
Q Consensus 55 ~M~Is~EeVkkLA~LARL~L~EEEle~l~~eLn~IL~~~d~L~eVDTegVEPm~hp-~~~NvLREDv~~~ 123 (144)
||+||+++|+|||+||||+++|+|++.++++|++|++||++|++|||+|||||+|+ +..|+||||++.-
T Consensus 2 ~m~i~~e~v~~iA~LArL~l~eee~~~~~~~l~~Il~~ve~L~evDt~~Vep~~~~~~~~~~lReD~v~~ 71 (592)
T 3al0_C 2 GIKVTKDLVLHLENLARLELSEDQRESLMKDFQEILDYVELLNEVDVEGVEPMYTPVEDSAKLRKGDPRF 71 (592)
T ss_dssp --CCCSTHHHHHHTTTTCCCCSSSHHHHHHHHHHHHHHHTTTCSSCCSSCCCCSCCSCSCCCCBCCCCCC
T ss_pred CCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcCcccccccccCCCCcCCC
Confidence 58899999999999999999999999999999999999999999999999999999 9999999999863
No 5
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=59.92 E-value=5.4 Score=26.89 Aligned_cols=44 Identities=5% Similarity=0.027 Sum_probs=32.4
Q ss_pred ccCcccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 42 YNNRTRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 42 ~~~~~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
+...++.+++..++ .|+.+|++++.+-.-..++++|++++.+++
T Consensus 38 l~~~F~~~D~d~~G-~I~~~El~~~l~~lg~~~~~~ei~~l~~~~ 81 (100)
T 2lv7_A 38 IREAFKVFDRDGNG-FISKQELGTAMRSLGYMPNEVELEVIIQRL 81 (100)
T ss_dssp HHHHHHHTCSSCSS-CBCHHHHHHHHHHHTCCCCTTTHHHHHHHH
T ss_pred HHHHHHHHcCCCCC-cCCHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 33445566665555 799999999998888899999887765443
No 6
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=49.12 E-value=14 Score=26.03 Aligned_cols=42 Identities=7% Similarity=0.012 Sum_probs=31.8
Q ss_pred ccCcccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHH
Q 032246 42 YNNRTRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAP 84 (144)
Q Consensus 42 ~~~~~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~ 84 (144)
+...++.+....++ .|+.++++++..-.-..++++|++.+.+
T Consensus 87 l~~aF~~fD~d~~G-~I~~~el~~~l~~~g~~ls~~ei~~~~~ 128 (153)
T 3i5g_B 87 LRNAFSMFDEDGQG-FIPEDYLKDLLENMGDNFSKEEIKNVWK 128 (153)
T ss_dssp HHHHHHTTCSSCSS-CCCHHHHHHHHHSSSSCCCHHHHHHHHT
T ss_pred HHHHHhccccCCCC-eEeHHHHHHHHHHcCCcCCHHHHHHHHH
Confidence 44556667665555 7999999999876667899999877654
No 7
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=48.09 E-value=19 Score=23.62 Aligned_cols=43 Identities=16% Similarity=0.130 Sum_probs=30.9
Q ss_pred ccCcccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 032246 42 YNNRTRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (144)
Q Consensus 42 ~~~~~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~e 85 (144)
+...++.+.+...+ .|+.+|++++..-....++++|++.+...
T Consensus 78 l~~~F~~~D~d~~G-~I~~~El~~~l~~~g~~~~~~~~~~~~~~ 120 (143)
T 3j04_B 78 IRNAFACFDEEASG-FIHEDHLRELLTTMGDRFTDEEVDEMYRE 120 (143)
T ss_dssp HHHHHTTSCSSSCC-CCCTTTHHHHHHTSSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCC-eEcHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 33445566655554 79999999999877788999887665443
No 8
>3a1k_A Amidase; AS family enzyme, hydrolase; 2.17A {Rhodococcus SP} PDB: 3a1i_A
Probab=47.12 E-value=17 Score=31.79 Aligned_cols=45 Identities=11% Similarity=0.121 Sum_probs=39.7
Q ss_pred CCCChhHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHhccCC
Q 032246 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVD 100 (144)
Q Consensus 56 M~Is~EeVkkLA~LARL~L~EEEle~l~~eLn~IL~~~d~L~eVD 100 (144)
..+++++++..+....+.|.++|++.+.+-++..++-++.+++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 48 (521)
T 3a1k_A 4 IRPDDKAIDAAARHYGITLDKTARLEWPALIDGALGSYDVVDQLY 48 (521)
T ss_dssp CCCCHHHHHHHHHHTTCCCCTTHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHhhh
Confidence 358999999999999999999999999999998888887777654
No 9
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=46.83 E-value=31 Score=19.66 Aligned_cols=30 Identities=13% Similarity=0.173 Sum_probs=24.0
Q ss_pred CCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 032246 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (144)
Q Consensus 56 M~Is~EeVkkLA~LARL~L~EEEle~l~~e 85 (144)
..|+.+|++++..-....+++++++.+...
T Consensus 16 G~i~~~el~~~l~~~~~~~~~~~~~~~~~~ 45 (67)
T 1tiz_A 16 GKLSLDEFREVALAFSPYFTQEDIVKFFEE 45 (67)
T ss_dssp SCEEHHHHHHHHHHTCTTSCHHHHHHHHHH
T ss_pred CcCcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 479999999998888888998887665544
No 10
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=46.39 E-value=26 Score=23.38 Aligned_cols=42 Identities=7% Similarity=0.007 Sum_probs=31.4
Q ss_pred CcccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 44 NRTRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 44 ~~~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
..++.+++...+ .|+.+|++++..-....++++|++.+...+
T Consensus 89 ~~F~~~D~d~~G-~I~~~el~~~l~~~g~~~~~~~~~~~~~~~ 130 (153)
T 2ovk_B 89 NAFSMFDEDGQG-FIPEDYLKDLLENMGDNFSKEEIKNVWKDA 130 (153)
T ss_dssp HHHHTTCSSCSS-CCCHHHHHHHHHHSSSCCCHHHHHHHHHHC
T ss_pred HHHHHHCCCCCC-eEcHHHHHHHHHHcCCCCCHHHHHHHHHHc
Confidence 334555555444 799999999999888889999887766543
No 11
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=45.28 E-value=34 Score=24.53 Aligned_cols=42 Identities=10% Similarity=0.174 Sum_probs=31.8
Q ss_pred CcccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 44 NRTRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 44 ~~~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
..++.+.....+ .|+.+|++++..-....++++|++++..++
T Consensus 88 ~aF~~fD~d~~G-~I~~~el~~~l~~~g~~~~~~ei~~l~~~~ 129 (176)
T 2lhi_A 88 EAFKVFDKNGDG-LISAAELKHVLTSIGEKLTDAEVDDMLREV 129 (176)
T ss_dssp HHHHHHCSSCSS-SBCHHHHHHHHHTTTCCCCHHHHHHHHHHH
T ss_pred HHHHHhCCCCCC-cCcHHHHHHHHHHcCcccchHHHHHHHHhh
Confidence 334455554444 799999999998888899999988876654
No 12
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=44.24 E-value=15 Score=21.38 Aligned_cols=38 Identities=11% Similarity=0.121 Sum_probs=26.4
Q ss_pred ccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHH
Q 032246 46 TRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAP 84 (144)
Q Consensus 46 ~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~ 84 (144)
++.+.+...+ .|+.+|++++..-....+++++++.+..
T Consensus 12 F~~~D~d~~G-~i~~~el~~~l~~~~~~~~~~~~~~~~~ 49 (71)
T 2b1u_A 12 FRAFDQDGDG-HITVDELRRAMAGLGQPLPQEELDAMIR 49 (71)
T ss_dssp HTTSCCSSSS-EEEHHHHHHHGGGTTCSSCHHHHHHHHH
T ss_pred HHHHCCCCCC-cCcHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 3344443333 7999999999887778888887665443
No 13
>3deu_A Transcriptional regulator SLYA; MARR, WING-helix, transcription regulator, activator, DNA-binding, repressor; HET: SAL; 2.30A {Salmonella typhimurium} SCOP: a.4.5.28
Probab=44.09 E-value=23 Score=25.18 Aligned_cols=28 Identities=18% Similarity=0.239 Sum_probs=22.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhccCC
Q 032246 73 SLTPHEVEEFAPKIRQVIDWFGQLQDVD 100 (144)
Q Consensus 73 ~L~EEEle~l~~eLn~IL~~~d~L~eVD 100 (144)
.++++|.+.+..-|+++.+.++++.+-|
T Consensus 139 ~l~~~e~~~l~~~L~~l~~~l~~~~~~d 166 (166)
T 3deu_A 139 GISSEEIELLIKLIAKLEHNIMELHSHD 166 (166)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHC----
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 7999999999999999999999877643
No 14
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=43.82 E-value=44 Score=23.59 Aligned_cols=30 Identities=10% Similarity=0.148 Sum_probs=23.2
Q ss_pred CCChhHHHHHHHHcCCCCCHHHHHHHHHHHHH
Q 032246 57 SLEPPDVPRLAQTARISLTPHEVEEFAPKIRQ 88 (144)
Q Consensus 57 ~Is~EeVkkLA~LARL~L~EEEle~l~~eLn~ 88 (144)
.|++++++.+.+-. .++++|+..+-..++.
T Consensus 15 ~l~~~el~~~~~~~--~~~~~~i~~~f~~~d~ 44 (207)
T 2d8n_A 15 ALSKEILEELQLNT--KFSEEELCSWYQSFLK 44 (207)
T ss_dssp CCCHHHHHHHHHHS--SCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHc--CCCHHHHHHHHHHHHh
Confidence 68999999998764 4688888887766543
No 15
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=43.36 E-value=21 Score=23.38 Aligned_cols=39 Identities=10% Similarity=0.096 Sum_probs=27.6
Q ss_pred cccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHH
Q 032246 45 RTRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAP 84 (144)
Q Consensus 45 ~~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~ 84 (144)
.++.+.+...+ .|+.+|++++..-.-..++++|++.+..
T Consensus 81 ~F~~~D~d~~G-~i~~~el~~~l~~~g~~~~~~~~~~~~~ 119 (140)
T 1ggw_A 81 GFQVFDKDATG-MIGVGELRYVLTSLGEKLSNEEMDELLK 119 (140)
T ss_dssp HHHTTCSSCSS-CCCHHHHHHHHHHHHSCSCHHHHHHHHH
T ss_pred HHHHhCCCCCC-cEeHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 34455554444 6999999998877777788888766544
No 16
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=43.28 E-value=37 Score=20.95 Aligned_cols=31 Identities=16% Similarity=0.221 Sum_probs=26.1
Q ss_pred CCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 56 M~Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
-.|+.+|++++..-....++++|++.+...+
T Consensus 24 G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~ 54 (92)
T 2kn2_A 24 GYISASELRHVMINLGEKLTDEEVEQMIKEA 54 (92)
T ss_dssp SEECHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred CeEcHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 3699999999998888889999988776654
No 17
>1h8b_A ACT-EF34, alpha-actinin 2, skeletal muscle isoform; structural protein, Z-DISK structural complex; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=42.57 E-value=20 Score=23.45 Aligned_cols=26 Identities=12% Similarity=0.314 Sum_probs=21.3
Q ss_pred CCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 032246 53 TTRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (144)
Q Consensus 53 ~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~e 85 (144)
...-.|+.+++++ .++++|++.+.++
T Consensus 21 dg~G~It~~eLr~-------~lt~eevd~~i~~ 46 (75)
T 1h8b_A 21 SDKPYILAEELRR-------ELPPDQAQYCIKR 46 (75)
T ss_dssp TSCSSBCHHHHHH-------HSCHHHHHHHHHH
T ss_pred cCCCCcCHHHHHh-------cCCHHHHHHHHHh
Confidence 3445799999999 5999999988776
No 18
>1taf_B TFIID TBP associated factor 62; transcription initiation, histone fold, complex (TWO transcr factors); 2.00A {Drosophila melanogaster} SCOP: a.22.1.3
Probab=41.96 E-value=74 Score=21.11 Aligned_cols=41 Identities=17% Similarity=0.237 Sum_probs=35.1
Q ss_pred CCCCCChhHHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHH
Q 032246 54 TRSSLEPPDVPRLAQTARI-SLTPHEVEEFAPKIRQVIDWFG 94 (144)
Q Consensus 54 ~~M~Is~EeVkkLA~LARL-~L~EEEle~l~~eLn~IL~~~d 94 (144)
.|..+..+-|+.+|+-+=+ +++|+-...+.++++..+.-+-
T Consensus 3 ~~s~lp~~~v~~iaes~Gi~~lsddaa~~LA~dvEyr~~eI~ 44 (70)
T 1taf_B 3 YGSSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIV 44 (70)
T ss_dssp CSCCCCHHHHHHHHHHTTCCCBCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4568999999999999999 8999999999999887666554
No 19
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=40.83 E-value=55 Score=22.66 Aligned_cols=45 Identities=7% Similarity=0.209 Sum_probs=34.4
Q ss_pred ccCcccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHHHH
Q 032246 42 YNNRTRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPKIR 87 (144)
Q Consensus 42 ~~~~~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~eLn 87 (144)
+...+..+++...+ .|+.+|++++..-.-..++++|++.+...++
T Consensus 52 l~~~F~~~D~d~~G-~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D 96 (150)
T 2jjz_A 52 FKEKYMEFDLNNEG-EIDLMSLKRMMEKLGVPKTHLEMKKMISEVT 96 (150)
T ss_dssp HHHHHTTSCCCTTS-SBCHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCcC-cCCHHHHHHHHHHcCCCCCHHHHHHHHHHHC
Confidence 44455566655444 7999999999887778899999998887664
No 20
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=40.82 E-value=33 Score=20.86 Aligned_cols=39 Identities=8% Similarity=0.110 Sum_probs=27.8
Q ss_pred ccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 032246 46 TRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (144)
Q Consensus 46 ~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~e 85 (144)
++.+..... ..|+.++++++..-....++++|++.+...
T Consensus 29 F~~~D~d~~-G~i~~~el~~~l~~~~~~~~~~~~~~l~~~ 67 (87)
T 1s6j_A 29 FKMIDTDNS-GTITFDELKDGLKRVGSELMESEIKDLMDA 67 (87)
T ss_dssp HHHHCTTCS-SCEEHHHHHHHHHTTTSSCCHHHHHHHHHH
T ss_pred HHHHCCCCC-CcCcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 334444333 479999999998888888998887665544
No 21
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=40.29 E-value=52 Score=21.01 Aligned_cols=41 Identities=15% Similarity=0.164 Sum_probs=28.8
Q ss_pred CcccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 032246 44 NRTRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (144)
Q Consensus 44 ~~~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~e 85 (144)
..+..++....+ .|+.+|++++..-....++++|++.+.++
T Consensus 33 ~~F~~~D~d~~G-~I~~~El~~~l~~~g~~~~~~e~~~l~~~ 73 (94)
T 2kz2_A 33 EAFRVEDKDGNG-YISAAELRHVMTNLGEKLTDEEVDEMIRE 73 (94)
T ss_dssp HHHHHHCTTCCS-CBCHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred HHHHHHCCCCcC-cCCHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 334444444333 69999999998887888998887766544
No 22
>3o0r_C Nitric oxide reductase subunit C; oxidoreductase, electron transport, heme, iron, membrane, CY membrane; HET: HEM HEC; 2.70A {Pseudomonas aeruginosa}
Probab=40.19 E-value=24 Score=24.42 Aligned_cols=24 Identities=8% Similarity=0.288 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCc
Q 032246 84 PKIRQVIDWFGQLQDVDLDSVDPA 107 (144)
Q Consensus 84 ~eLn~IL~~~d~L~eVDTegVEPm 107 (144)
+|+.+|++|+..+.++|+.+-+|-
T Consensus 120 ~ei~~l~ayl~~l~~~~~~~wP~~ 143 (146)
T 3o0r_C 120 GQVDDLAEFLKWSSKIDTNQWPPN 143 (146)
T ss_dssp HHHHHHHHHHHHHTTSCCSSCSSS
T ss_pred HHHHHHHHHHHHhccCccCCCCCC
Confidence 346778889999999999887764
No 23
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=39.70 E-value=56 Score=20.11 Aligned_cols=31 Identities=16% Similarity=0.279 Sum_probs=24.7
Q ss_pred CCChhHHHHHHHH-----cCCCCCHHHHHHHHHHHH
Q 032246 57 SLEPPDVPRLAQT-----ARISLTPHEVEEFAPKIR 87 (144)
Q Consensus 57 ~Is~EeVkkLA~L-----ARL~L~EEEle~l~~eLn 87 (144)
.|+.+|++.+..- ....+++++++.+...++
T Consensus 27 ~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D 62 (93)
T 1k2h_A 27 KLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELD 62 (93)
T ss_dssp SCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence 7999999998875 567889998887766553
No 24
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=39.60 E-value=45 Score=20.57 Aligned_cols=38 Identities=5% Similarity=0.086 Sum_probs=27.6
Q ss_pred cCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 032246 47 RNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (144)
Q Consensus 47 ~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~e 85 (144)
..+..... ..|+.++++++..-....+++++++.+...
T Consensus 27 ~~~D~d~~-G~i~~~el~~~l~~~g~~~~~~~~~~l~~~ 64 (90)
T 1avs_A 27 DMFDADGG-GDISTKELGTVMRMLGQNPTKEELDAIIEE 64 (90)
T ss_dssp HHHCTTCS-SEECHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHCCCCC-CcCcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 33444333 369999999999888888999887776544
No 25
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=39.02 E-value=30 Score=22.90 Aligned_cols=42 Identities=14% Similarity=0.057 Sum_probs=31.3
Q ss_pred CcccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 44 NRTRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 44 ~~~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
..++.+++...+ .|+.+|++++..-....++++|++.+...+
T Consensus 88 ~~F~~~D~d~~G-~I~~~el~~~l~~~g~~~~~~~~~~~~~~~ 129 (146)
T 2qac_A 88 KMFAHFDNNCTG-YLTKSQMKNILTTWGDALTDQEAIDALNAF 129 (146)
T ss_dssp HHHHTTCTTCSS-EEEHHHHHHHHHHSSSCCCHHHHHHHHHHH
T ss_pred HHHHHhCCCCCC-CCCHHHHHHHHHHhCCCCCHHHHHHHHHHc
Confidence 344555554444 699999999988877889999988776654
No 26
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=37.98 E-value=27 Score=24.65 Aligned_cols=40 Identities=3% Similarity=0.056 Sum_probs=30.3
Q ss_pred ccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 46 TRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 46 ~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
++.+.....+ .|+.++++++..-.-..++++|++.+.+.+
T Consensus 91 F~~fD~d~~G-~I~~~el~~~l~~~g~~ls~~e~~~l~~~~ 130 (159)
T 3i5g_C 91 FKTFDREGQG-LISSAEIRNVLKMLGERITEDQCNDIFTFC 130 (159)
T ss_dssp HHHHCTTSSS-EECHHHHHHHHHHSSSCCCHHHHHHHHHHT
T ss_pred HHHHhcCCCC-cCcHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 4455554444 799999999998888899999988775543
No 27
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=37.31 E-value=49 Score=21.32 Aligned_cols=44 Identities=7% Similarity=0.194 Sum_probs=32.0
Q ss_pred ccCcccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 42 YNNRTRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 42 ~~~~~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
+...+..++....+ .|+.+|++++..-.-..+++++++.+...+
T Consensus 34 l~~~F~~~D~d~~G-~I~~~el~~~l~~~g~~~~~~~~~~l~~~~ 77 (107)
T 2d58_A 34 FKEKYMEFDLNGNG-DIDIMSLKRMLEKLGVPKTHLELKKLIGEV 77 (107)
T ss_dssp HHHHHTTSCCCTTS-CEEHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCC-cCcHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 34445566655554 799999999998888889998887765543
No 28
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=36.32 E-value=65 Score=21.36 Aligned_cols=40 Identities=13% Similarity=0.158 Sum_probs=29.5
Q ss_pred cccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 032246 45 RTRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (144)
Q Consensus 45 ~~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~e 85 (144)
.++.+.....+ .|+.+|++++..-....++++|++.+..+
T Consensus 88 ~F~~~D~d~~G-~I~~~el~~~l~~~g~~~~~~~~~~~~~~ 127 (148)
T 1exr_A 88 AFKVFDRDGNG-LISAAELRHVMTNLGEKLTDDEVDEMIRE 127 (148)
T ss_dssp HHHHHSTTCSS-CBCHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHhCCCCCC-cCCHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 34455554444 69999999998887788999988776554
No 29
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=35.48 E-value=46 Score=22.46 Aligned_cols=41 Identities=15% Similarity=0.151 Sum_probs=29.4
Q ss_pred cccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 45 RTRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 45 ~~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
.++.+++...+ .|+.+|++++..-....++++|++.+...+
T Consensus 100 ~F~~~D~d~~G-~I~~~el~~~l~~~g~~~~~~~~~~~~~~~ 140 (166)
T 2mys_B 100 AFKVLDPDGKG-SIKKSFLEELLTTGGGRFTPEEIKNMWAAF 140 (166)
T ss_pred HHHHhCCCCCc-ceeHHHHHHHHHHcCCCCCHHHHHHHHHhc
Confidence 34445544444 699999999988777788998887776543
No 30
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=35.35 E-value=54 Score=21.20 Aligned_cols=40 Identities=13% Similarity=0.188 Sum_probs=29.2
Q ss_pred ccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 46 TRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 46 ~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
++.+.....+ .|+.+|++++..-....++++|++.+...+
T Consensus 90 F~~~D~d~~G-~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 129 (147)
T 4ds7_A 90 FKVFDKNGDG-LISAAELKHVLTSIGEKLTDAEVDEMLREV 129 (147)
T ss_dssp HHHHCTTCSS-EECHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred HHHhCCCCCC-eECHHHHHHHHHHcCCCCCHHHHHHHHHHh
Confidence 3344443333 699999999999888889998877766544
No 31
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=34.83 E-value=31 Score=20.92 Aligned_cols=40 Identities=8% Similarity=0.116 Sum_probs=28.7
Q ss_pred ccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 46 TRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 46 ~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
+..+.....+ .|+.+|++++..-....+++++++.+...+
T Consensus 20 F~~~D~d~~G-~i~~~el~~~l~~~g~~~~~~~~~~~~~~~ 59 (85)
T 2ktg_A 20 FQLFDKDNDN-KLTAEELGTVMRALGANPTKQKISEIVKDY 59 (85)
T ss_dssp HHHTCTTCCS-EEEHHHHHHHHHTTSSCCCHHHHHHHHHHH
T ss_pred HHHHCCCCCC-cCcHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 3344443333 699999999988777889998887766554
No 32
>4gyt_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, predicted legionella effector; 2.05A {Legionella pneumophila subsp}
Probab=34.52 E-value=30 Score=26.21 Aligned_cols=36 Identities=14% Similarity=0.127 Sum_probs=26.3
Q ss_pred ChhHHHHHHHHcCCCCCH-HHHHHHHHHHHHHHHHHH
Q 032246 59 EPPDVPRLAQTARISLTP-HEVEEFAPKIRQVIDWFG 94 (144)
Q Consensus 59 s~EeVkkLA~LARL~L~E-EEle~l~~eLn~IL~~~d 94 (144)
.+|-++.++.+|+++.++ ++-++-...+.+|++|+.
T Consensus 134 ~~E~l~dl~~Ia~l~~d~~dd~ee~E~~~~El~EyvR 170 (194)
T 4gyt_A 134 SQDALQHLMEFAELDCESLEVGEEDERALMEVSEYTR 170 (194)
T ss_dssp HHHHHHHHHHHTTCCTTTCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCcccCcCcccHHHHHHHHHHHH
Confidence 356677789999998764 334556778888888875
No 33
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=34.07 E-value=36 Score=20.10 Aligned_cols=30 Identities=10% Similarity=0.164 Sum_probs=23.9
Q ss_pred CCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 032246 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (144)
Q Consensus 56 M~Is~EeVkkLA~LARL~L~EEEle~l~~e 85 (144)
..|+.+|++++..-....+++++++.+...
T Consensus 22 G~i~~~el~~~l~~~g~~~~~~~~~~~~~~ 51 (77)
T 2joj_A 22 GSIDYHELKVAMRALGFDVKKPEILELMNE 51 (77)
T ss_dssp SEEEHHHHHHHHHHHTCCCHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 368999999998888888888887765544
No 34
>2gxg_A 146AA long hypothetical transcriptional regulator; winged helix; 1.45A {Sulfolobus tokodaii} PDB: 2eb7_A 2yr2_A 3gez_A 3gf2_A* 3gfi_A 3gfm_A 3gfj_A 3gfl_A
Probab=33.82 E-value=1e+02 Score=20.41 Aligned_cols=30 Identities=17% Similarity=0.222 Sum_probs=24.4
Q ss_pred HHcCCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 032246 68 QTARISLTPHEVEEFAPKIRQVIDWFGQLQ 97 (144)
Q Consensus 68 ~LARL~L~EEEle~l~~eLn~IL~~~d~L~ 97 (144)
.-..=.++++|.+.+.+-++++.+.++.+.
T Consensus 116 ~~~~~~l~~~e~~~l~~~l~~~~~~l~~~~ 145 (146)
T 2gxg_A 116 NEVTGDLSEDEVILVLDKISKILKRIEEIS 145 (146)
T ss_dssp HHHTTTSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 333447899999999999999999888764
No 35
>3bpv_A Transcriptional regulator; MARR, DNA binding, transcription factor, winged helix motif, DNA-binding; 1.40A {Methanobacterium thermoautotrophicum} PDB: 3bpx_A*
Probab=33.69 E-value=95 Score=20.38 Aligned_cols=27 Identities=15% Similarity=0.073 Sum_probs=22.8
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 032246 70 ARISLTPHEVEEFAPKIRQVIDWFGQL 96 (144)
Q Consensus 70 ARL~L~EEEle~l~~eLn~IL~~~d~L 96 (144)
..=.++++|.+.+.+-++++.+.++.+
T Consensus 111 ~~~~l~~~e~~~l~~~l~~~~~~l~~~ 137 (138)
T 3bpv_A 111 LFRDFTEDERKLFRKMCRRLAEEAVRM 137 (138)
T ss_dssp HTTTSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 334799999999999999999888765
No 36
>2fji_1 Exocyst complex component SEC6; exocytosis, tandem helical bundles, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=33.28 E-value=74 Score=26.36 Aligned_cols=53 Identities=8% Similarity=0.120 Sum_probs=45.4
Q ss_pred CCChhHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccCC
Q 032246 57 SLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRA 110 (144)
Q Consensus 57 ~Is~EeVkkLA~LARL~L~EEEle~l~~eLn~IL~~~d~L~eVDTegVEPm~hp 110 (144)
.++++.|+.|-. .|-+++.+++.++.+.+.+|..-=.+..++++++-+|+...
T Consensus 338 D~~~~~V~aiL~-~R~D~~~~~~k~ll~~~~~~~~~~~~~~~~~~~~~~~t~~~ 390 (399)
T 2fji_1 338 DSRIDLLVGILK-CRKDVSSSERKKIVQQATEMLHEYRRNMEANGVDREPTLMR 390 (399)
T ss_dssp TCCSHHHHHHHT-TCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCGGG
T ss_pred CCCHHHHHHHHH-hccCCCHHHHHHHHHHHHHHHHhHHHHhhccccCCCCchhh
Confidence 578999999985 67899999999999999999888888888888888876543
No 37
>3a1y_A 50S ribosomal protein P1 (L12P); stalk, helix SPIN, ribonucleoprotein; 2.13A {Pyrococcus horikoshii}
Probab=33.02 E-value=61 Score=20.58 Aligned_cols=32 Identities=6% Similarity=0.216 Sum_probs=29.1
Q ss_pred CCCChhHHHHHHHHcCCCCCHHHHHHHHHHHH
Q 032246 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPKIR 87 (144)
Q Consensus 56 M~Is~EeVkkLA~LARL~L~EEEle~l~~eLn 87 (144)
..+|.++|++|-+-+-++.+++-...+.+.|+
T Consensus 15 ~~~t~~~I~~il~aaGveve~~~~~~~~~~L~ 46 (58)
T 3a1y_A 15 KEINEENLKAVLQAAGVEPEEARIKALVAALE 46 (58)
T ss_dssp CCCCHHHHHHHHHHTTCCCCHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHcCCCccHHHHHHHHHHHC
Confidence 47899999999999999999999999988773
No 38
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=32.94 E-value=79 Score=21.14 Aligned_cols=40 Identities=20% Similarity=0.266 Sum_probs=29.0
Q ss_pred ccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 46 TRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 46 ~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
++.++....+ .|+.+|++++..-....++++|++.+...+
T Consensus 107 F~~~D~d~~G-~i~~~el~~~l~~~g~~~~~~~~~~~~~~~ 146 (169)
T 3qrx_A 107 FRLFDDDNSG-TITIKDLRRVAKELGENLTEEELQEMIAEA 146 (169)
T ss_dssp HHHHCTTCSS-SBCHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred HHHhCCCCCC-cCCHHHHHHHHHHcCCCCCHHHHHHHHHHh
Confidence 4444444433 799999999998888889999887665443
No 39
>3k0l_A Repressor protein; helix-turn-helix, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.35A {Acinetobacter SP}
Probab=32.58 E-value=47 Score=23.06 Aligned_cols=31 Identities=3% Similarity=0.011 Sum_probs=22.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhccCCC
Q 032246 71 RISLTPHEVEEFAPKIRQVIDWFGQLQDVDL 101 (144)
Q Consensus 71 RL~L~EEEle~l~~eLn~IL~~~d~L~eVDT 101 (144)
.=.++++|++.+..-|+++.+.++.+...|-
T Consensus 129 ~~~l~~~e~~~l~~~L~~l~~~l~~~~~~d~ 159 (162)
T 3k0l_A 129 LQGVDINLAFLIRNNLELMVKNLSTFSSLDQ 159 (162)
T ss_dssp TTTSCHHHHHHHHHHHHHHHHHTCC------
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 3479999999999999999998888776654
No 40
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=32.58 E-value=78 Score=20.46 Aligned_cols=40 Identities=10% Similarity=0.212 Sum_probs=28.2
Q ss_pred ccCCCCCCCCCCCChhHHHHHHHH-cCCCCCHHHHHHHHHHH
Q 032246 46 TRNCSTTTTRSSLEPPDVPRLAQT-ARISLTPHEVEEFAPKI 86 (144)
Q Consensus 46 ~~~~st~~~~M~Is~EeVkkLA~L-ARL~L~EEEle~l~~eL 86 (144)
++.+..... -.|+.+|++++..- ....+++++++.+...+
T Consensus 94 F~~~D~d~~-G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~ 134 (153)
T 3ox6_A 94 FREFDTNGD-GEISTSELREAMRALLGHQVGHRDIEEIIRDV 134 (153)
T ss_dssp HHHHCTTCS-SSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHH
T ss_pred HHHhCCCCC-CcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHh
Confidence 334444333 37999999999877 78889998877765543
No 41
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=32.20 E-value=67 Score=20.50 Aligned_cols=31 Identities=10% Similarity=0.147 Sum_probs=24.1
Q ss_pred CCCChhHHHHHHHH-----cCCCCCHHHHHHHHHHH
Q 032246 56 SSLEPPDVPRLAQT-----ARISLTPHEVEEFAPKI 86 (144)
Q Consensus 56 M~Is~EeVkkLA~L-----ARL~L~EEEle~l~~eL 86 (144)
-.|+.+|++++.+- ....+++++++++.+++
T Consensus 26 g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~ 61 (92)
T 3rm1_A 26 HKLKKSELKELINNELSHFLEEIKEQEVVDKVMETL 61 (92)
T ss_dssp TSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHH
T ss_pred CeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHH
Confidence 47999999998876 55678888888776653
No 42
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=31.48 E-value=87 Score=20.78 Aligned_cols=41 Identities=17% Similarity=0.208 Sum_probs=29.5
Q ss_pred CcccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 032246 44 NRTRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (144)
Q Consensus 44 ~~~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~e 85 (144)
..++.+.....+ .|+.+|++++..-.-..++++|++.+.++
T Consensus 83 ~~F~~~D~d~~G-~I~~~el~~~l~~~g~~~~~~~~~~~~~~ 123 (143)
T 2obh_A 83 KAFKLFDDDETG-KISFKNLKRVAKELGENLTDEELQEMIDE 123 (143)
T ss_dssp HHHHHHCTTCSS-SBCHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHHhCCCCCC-cCcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 344455554444 69999999998776677899888877544
No 43
>4hbl_A Transcriptional regulator, MARR family; HTH, transcription factor, DNA binding; 2.50A {Staphylococcus epidermidis}
Probab=31.26 E-value=51 Score=22.51 Aligned_cols=28 Identities=11% Similarity=0.087 Sum_probs=23.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhcc
Q 032246 71 RISLTPHEVEEFAPKIRQVIDWFGQLQD 98 (144)
Q Consensus 71 RL~L~EEEle~l~~eLn~IL~~~d~L~e 98 (144)
.=.++++|.+.+..-|+++.+.++.+.+
T Consensus 121 ~~~l~~~e~~~l~~~l~~l~~~l~~~~~ 148 (149)
T 4hbl_A 121 PQEFDTTEYDETKYVFEELEQTLKHLIE 148 (149)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HhhCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3378999999999999999999887753
No 44
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=31.20 E-value=64 Score=21.76 Aligned_cols=39 Identities=10% Similarity=0.144 Sum_probs=28.5
Q ss_pred ccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 032246 46 TRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (144)
Q Consensus 46 ~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~e 85 (144)
++.+....++ .|+.+|++++..-.-..++++|++.+..+
T Consensus 89 F~~~D~d~~G-~I~~~El~~~l~~~g~~~~~~e~~~l~~~ 127 (148)
T 2lmt_A 89 FKIFDRDGDG-FISPAELRFVMINLGEKVTDEEIDEMIRE 127 (148)
T ss_dssp HHHHHSSCSS-EECHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred HHHHCCCCcC-cCcHHHHHHHHHHcCccccHHHHHHHHHH
Confidence 3344444444 79999999998888889999988776544
No 45
>4aik_A Transcriptional regulator SLYA; transcription, transcription factor; 1.85A {Yersinia pseudotuberculosis} PDB: 4aih_A 4aij_A 3qpt_A* 3q5f_A*
Probab=30.97 E-value=1e+02 Score=21.52 Aligned_cols=28 Identities=18% Similarity=0.122 Sum_probs=23.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhcc
Q 032246 71 RISLTPHEVEEFAPKIRQVIDWFGQLQD 98 (144)
Q Consensus 71 RL~L~EEEle~l~~eLn~IL~~~d~L~e 98 (144)
.=.++++|.+.+..-|++|.+-++++++
T Consensus 115 ~~~l~~ee~~~l~~~L~kl~~nl~~l~~ 142 (151)
T 4aik_A 115 LGGISSDEIAVLSGLIDKLEKNIIQLQT 142 (151)
T ss_dssp TTTSCHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3478999999999999999998887754
No 46
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=30.94 E-value=39 Score=22.54 Aligned_cols=41 Identities=10% Similarity=0.019 Sum_probs=30.4
Q ss_pred cccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 45 RTRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 45 ~~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
.++.+++...+ .|+.+|++++..-....++++|++.+.+.+
T Consensus 92 ~F~~~D~d~~G-~I~~~el~~~l~~~g~~~~~~~~~~~~~~~ 132 (156)
T 1wdc_B 92 AFAMFDEQETK-KLNIEYIKDLLENMGDNFNKDEMRMTFKEA 132 (156)
T ss_dssp HHHTTCTTCCS-CEEHHHHHHHHHHSSSCCCHHHHHHHHHHC
T ss_pred HHHHHCcCCCC-ccCHHHHHHHHHHhCCCCCHHHHHHHHHhc
Confidence 34555554444 699999999988777789999888776553
No 47
>2lbf_B 60S acidic ribosomal protein P2; ribosome, stalk, P1/P2; NMR {Homo sapiens} PDB: 2w1o_A
Probab=30.32 E-value=46 Score=22.15 Aligned_cols=31 Identities=10% Similarity=0.258 Sum_probs=28.7
Q ss_pred CCChhHHHHHHHHcCCCCCHHHHHHHHHHHH
Q 032246 57 SLEPPDVPRLAQTARISLTPHEVEEFAPKIR 87 (144)
Q Consensus 57 ~Is~EeVkkLA~LARL~L~EEEle~l~~eLn 87 (144)
.++.++|++|-+-+-++.+++-.+.+.+.|+
T Consensus 18 ~~ta~~I~~il~aaGvevd~~~~~~~~~aL~ 48 (70)
T 2lbf_B 18 SPSAKDIKKILDSVGIEADDDRLNKVISELN 48 (70)
T ss_dssp SCCHHHHHHHHHTTTCCCCTTHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHcCCCccHHHHHHHHHHHc
Confidence 6899999999999999999999999988774
No 48
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=30.23 E-value=41 Score=23.40 Aligned_cols=43 Identities=7% Similarity=0.105 Sum_probs=28.4
Q ss_pred CcccCCC-CCCCCCCCChhHHHHHHHH-----cCCCCCHHHHHHHHHHH
Q 032246 44 NRTRNCS-TTTTRSSLEPPDVPRLAQT-----ARISLTPHEVEEFAPKI 86 (144)
Q Consensus 44 ~~~~~~s-t~~~~M~Is~EeVkkLA~L-----ARL~L~EEEle~l~~eL 86 (144)
..++.|+ ....+-.|+.+|++.+..- ....++++|++++.+++
T Consensus 26 ~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~ 74 (113)
T 2lnk_A 26 STFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNL 74 (113)
T ss_dssp HHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHH
T ss_pred HHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHh
Confidence 3445565 2222237999999999853 23467888888887654
No 49
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=29.57 E-value=70 Score=20.73 Aligned_cols=39 Identities=21% Similarity=0.187 Sum_probs=27.4
Q ss_pred ccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 032246 46 TRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (144)
Q Consensus 46 ~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~e 85 (144)
++.+.+...+ .|+.+|++++..-....+++++++.+...
T Consensus 85 F~~~D~d~~G-~i~~~el~~~l~~~g~~~~~~~~~~~~~~ 123 (142)
T 2bl0_C 85 FRTFDPEGTG-YIPKAALQDALLNLGDRLKPHEFAEFLGI 123 (142)
T ss_dssp HHHTCCSSCS-CEEHHHHHHHHHHSSSCCCHHHHHHHHHH
T ss_pred HHHHCCCCCC-cCcHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 3344443333 79999999998877778898887665443
No 50
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=29.32 E-value=73 Score=21.57 Aligned_cols=32 Identities=16% Similarity=0.226 Sum_probs=25.3
Q ss_pred CCCChhHHHHHHHH--c---CCCCCHHHHHHHHHHHH
Q 032246 56 SSLEPPDVPRLAQT--A---RISLTPHEVEEFAPKIR 87 (144)
Q Consensus 56 M~Is~EeVkkLA~L--A---RL~L~EEEle~l~~eLn 87 (144)
-.|+.+|++++-+- . .-.++++|++++.++++
T Consensus 27 G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D 63 (101)
T 3nso_A 27 YKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLD 63 (101)
T ss_dssp TEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHH
T ss_pred CEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhC
Confidence 47999999998863 2 35688999999887764
No 51
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=29.23 E-value=34 Score=25.14 Aligned_cols=28 Identities=21% Similarity=0.298 Sum_probs=23.0
Q ss_pred CChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 58 LEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 58 Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
-|+++++++.++.. ++++||.+++.++-
T Consensus 128 kt~eeir~~f~I~n-d~t~eEe~~ir~en 155 (160)
T 2p1m_A 128 KTPEEIRTTFNIKN-DFTPEEEEEVRREN 155 (160)
T ss_dssp CCHHHHHHHTTCCC-CCCHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCCC-CCCHHHHHHHHHhC
Confidence 38999999998876 89999988877653
No 52
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=29.06 E-value=1.3e+02 Score=20.03 Aligned_cols=43 Identities=14% Similarity=0.178 Sum_probs=30.1
Q ss_pred cCCCCCCCCCCCChhHHHH----HHHHcCCCCCHHHHHHHHHHHHHHH
Q 032246 47 RNCSTTTTRSSLEPPDVPR----LAQTARISLTPHEVEEFAPKIRQVI 90 (144)
Q Consensus 47 ~~~st~~~~M~Is~EeVkk----LA~LARL~L~EEEle~l~~eLn~IL 90 (144)
..+.+... ..|+.+|+.. +.....+.++++|+..+...+...+
T Consensus 14 ~~~D~d~~-G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~ 60 (176)
T 1nya_A 14 DRWDFDGN-GALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLF 60 (176)
T ss_dssp HHCCSSCC-SSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHH
T ss_pred HHHcCCCC-CcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHH
Confidence 34444333 3799999999 6677788899999987776555433
No 53
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=28.79 E-value=75 Score=21.91 Aligned_cols=44 Identities=7% Similarity=0.169 Sum_probs=34.0
Q ss_pred ccCcccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 42 YNNRTRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 42 ~~~~~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
+...+..+++...+ .|+.+|++++..-.-..++++|++.+...+
T Consensus 50 l~~~F~~~D~d~dG-~I~~~El~~~l~~~g~~~~~~~~~~l~~~~ 93 (147)
T 1wy9_A 50 FKVKYMEFDLNGNG-DIDIMSLKRMLEKLGVPKTHLELKRLIREV 93 (147)
T ss_dssp HHHHHTTSCCCTTS-SEEHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCC-cCcHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 44455666655544 799999999998888889999999887765
No 54
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=28.15 E-value=50 Score=20.94 Aligned_cols=40 Identities=13% Similarity=0.179 Sum_probs=29.6
Q ss_pred ccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 46 TRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 46 ~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
++.+..... ..|+.+|++++..-....++++|++.+...+
T Consensus 30 F~~~D~d~~-G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~ 69 (105)
T 1wlz_A 30 FENFDTMKT-NTISREEFRAICNRRVQILTDEQFDRLWNEM 69 (105)
T ss_dssp HHHHCTTCS-SCBCHHHHHHHHHHHTCCCCHHHHHHHHTTS
T ss_pred HHHHCCCCC-CcCcHHHHHHHHHHhCCCCCHHHHHHHHHHc
Confidence 334444333 3799999999998888899999988776543
No 55
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=27.89 E-value=1.1e+02 Score=20.52 Aligned_cols=41 Identities=7% Similarity=0.148 Sum_probs=29.9
Q ss_pred cccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 45 RTRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 45 ~~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
.++.+.....+ .|+.+|++++..-....+++++++.+...+
T Consensus 75 ~F~~~D~d~~G-~i~~~el~~~l~~~g~~~~~~~~~~~~~~~ 115 (165)
T 1k94_A 75 NFMTVDQDGSG-TVEHHELRQAIGLMGYRLSPQTLTTIVKRY 115 (165)
T ss_dssp HHHHHCTTCCS-BCCHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred HHHHhCCCCCc-eECHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 34444444443 799999999988877889999988877653
No 56
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=27.56 E-value=75 Score=20.05 Aligned_cols=40 Identities=8% Similarity=0.009 Sum_probs=28.0
Q ss_pred ccCCCCCCCCCCCChhHHHHHHHHc---CCCCCHHHHHHHHHHH
Q 032246 46 TRNCSTTTTRSSLEPPDVPRLAQTA---RISLTPHEVEEFAPKI 86 (144)
Q Consensus 46 ~~~~st~~~~M~Is~EeVkkLA~LA---RL~L~EEEle~l~~eL 86 (144)
++.+.+...+ .|+.+|++++.... ...+++++++.+.+.+
T Consensus 47 F~~~D~d~~G-~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~ 89 (109)
T 5pal_A 47 FEILDKDQSG-FIEEEELKGVLKGFSAHGRDLNDTETKALLAAG 89 (109)
T ss_dssp HHHHCTTCSS-EECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHH
T ss_pred HHHHCCCCCC-cCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHh
Confidence 3344444443 69999999988876 7889988877665443
No 57
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=27.20 E-value=1e+02 Score=20.64 Aligned_cols=35 Identities=11% Similarity=0.181 Sum_probs=27.0
Q ss_pred CCCChhHHHHHHHHcC----CCCCHHHHHHHHHHHHHHH
Q 032246 56 SSLEPPDVPRLAQTAR----ISLTPHEVEEFAPKIRQVI 90 (144)
Q Consensus 56 M~Is~EeVkkLA~LAR----L~L~EEEle~l~~eLn~IL 90 (144)
-.|+.+|+..+..... ..+++++++.+...+....
T Consensus 24 G~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~ 62 (185)
T 2sas_A 24 GSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEW 62 (185)
T ss_dssp SEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHH
T ss_pred CeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence 3789999988877666 8899999988866655544
No 58
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=27.06 E-value=45 Score=22.48 Aligned_cols=39 Identities=13% Similarity=0.088 Sum_probs=28.4
Q ss_pred cccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 45 RTRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 45 ~~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
.+..+++...+ .|+.+|++.+.. ...+++++++.+..++
T Consensus 19 ~F~~~D~d~dG-~I~~~El~~~l~--~~~~~~~~~~~i~~~~ 57 (111)
T 2kgr_A 19 LFNSHDKTMSG-HLTGPQARTILM--QSSLPQAQLASIWNLS 57 (111)
T ss_dssp HHHTTSCSSCC-EEEHHHHHHHHH--TTCCCHHHHHHHHHHH
T ss_pred HHHHHCCCCCC-cCcHHHHHHHHH--hCCCCHHHHHHHHHHH
Confidence 34455554444 699999999887 6788999988877543
No 59
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=26.90 E-value=16 Score=23.14 Aligned_cols=36 Identities=25% Similarity=0.356 Sum_probs=19.9
Q ss_pred CCCChhHHHHHHHH-cCCCCCHHHHHHHHHHHHHHHH
Q 032246 56 SSLEPPDVPRLAQT-ARISLTPHEVEEFAPKIRQVID 91 (144)
Q Consensus 56 M~Is~EeVkkLA~L-ARL~L~EEEle~l~~eLn~IL~ 91 (144)
|.+|+.||....-- ..=+.+++|++.+..++.+-++
T Consensus 1 M~lTp~dI~~k~F~~~~rGY~~~EVD~FLd~v~~~~~ 37 (57)
T 2wuj_A 1 MPLTPNDIHNKTFTKSFRGYDEDEVNEFLAQVRKDYE 37 (57)
T ss_dssp --CCHHHHTTCCCCEETTEEEHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHhhCcCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 45666666543221 2226788888877766655444
No 60
>3nrv_A Putative transcriptional regulator (MARR/EMRR FAM; PSI-2, protein structure initiati structural genomics; HET: MSE; 2.00A {Acinetobacter SP}
Probab=26.61 E-value=1.2e+02 Score=20.32 Aligned_cols=26 Identities=8% Similarity=0.105 Sum_probs=22.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHh
Q 032246 71 RISLTPHEVEEFAPKIRQVIDWFGQL 96 (144)
Q Consensus 71 RL~L~EEEle~l~~eLn~IL~~~d~L 96 (144)
-=.++++|.+.+..-|+++.+.++.+
T Consensus 123 ~~~l~~~e~~~l~~~l~~l~~~l~~l 148 (148)
T 3nrv_A 123 LEEFEEAEKDQLFILLKKLRNKVDQM 148 (148)
T ss_dssp TTTCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHcCCHHHHHHHHHHHHHHHHHhhcC
Confidence 34689999999999999999888764
No 61
>2lbf_A 60S acidic ribosomal protein P1; ribosome, stalk, P1/P2; NMR {Homo sapiens}
Probab=26.56 E-value=55 Score=21.60 Aligned_cols=31 Identities=16% Similarity=0.265 Sum_probs=27.0
Q ss_pred CCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 56 M~Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
..+|.++|++|-+-+-++.++.-...+.+.|
T Consensus 21 ~~~ta~~I~~il~AaGveve~~~~~lf~~aL 51 (69)
T 2lbf_A 21 VTVTEDKINALIKAAGVNVEPFWPGLFAKAL 51 (69)
T ss_dssp CCCCHHHHHHHHHHHTCCCCTHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHcCCCccHHHHHHHHHHH
Confidence 4789999999999999999999888887754
No 62
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=26.47 E-value=54 Score=25.18 Aligned_cols=38 Identities=16% Similarity=0.324 Sum_probs=29.8
Q ss_pred CCCCChhHHHHHHHHcCC----CCCHHHHHHHHHHHHHHHHH
Q 032246 55 RSSLEPPDVPRLAQTARI----SLTPHEVEEFAPKIRQVIDW 92 (144)
Q Consensus 55 ~M~Is~EeVkkLA~LARL----~L~EEEle~l~~eLn~IL~~ 92 (144)
||.+|.++++...+---+ =++++|++++.+++.++++-
T Consensus 1 m~~Lt~e~~~~f~~dGyvvl~~~l~~e~v~~l~~~~~~~~~~ 42 (291)
T 2opw_A 1 MACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAE 42 (291)
T ss_dssp -CCCCHHHHHHHHHHSEEEETTSSCHHHHHHHHHHHHHHHHT
T ss_pred CCcCCHHHHHHHHhCCEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence 567899999888875443 35899999999999988764
No 63
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=26.47 E-value=1.2e+02 Score=19.56 Aligned_cols=31 Identities=19% Similarity=0.158 Sum_probs=24.9
Q ss_pred CCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 56 M~Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
-.|+.+|+.++..-..+.++++++..+...+
T Consensus 26 G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~ 56 (153)
T 3ox6_A 26 GYINCRDLGNCMRTMGYMPTEMELIELSQQI 56 (153)
T ss_dssp SSCCHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred CcCcHHHHHHHHHHcCCCCCHHHHHHHHHHh
Confidence 3789999999888888888988887776553
No 64
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=26.22 E-value=82 Score=19.77 Aligned_cols=40 Identities=8% Similarity=0.047 Sum_probs=27.7
Q ss_pred ccCCCCCCCCCCCChhHHHHHHHHc---CCCCCHHHHHHHHHHH
Q 032246 46 TRNCSTTTTRSSLEPPDVPRLAQTA---RISLTPHEVEEFAPKI 86 (144)
Q Consensus 46 ~~~~st~~~~M~Is~EeVkkLA~LA---RL~L~EEEle~l~~eL 86 (144)
++.+.+...+ .|+.+|++++..-. ...++++|++.+...+
T Consensus 47 F~~~D~d~~G-~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~ 89 (109)
T 1rwy_A 47 FHILDKDKSG-FIEEDELGSILKGFSSDARDLSAKETKTLMAAG 89 (109)
T ss_dssp HHHHSTTCSS-EECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHH
T ss_pred HHHHCCCCCC-eEcHHHHHHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 3444444443 69999999988876 6788988877665543
No 65
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=25.81 E-value=69 Score=18.95 Aligned_cols=28 Identities=14% Similarity=0.234 Sum_probs=21.5
Q ss_pred CCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 032246 57 SLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (144)
Q Consensus 57 ~Is~EeVkkLA~LARL~L~EEEle~l~~e 85 (144)
.|+.+|++.+..-.. .+++++++.+...
T Consensus 19 ~i~~~el~~~l~~~g-~~~~~~~~~~~~~ 46 (78)
T 1k9u_A 19 KISLSELTDALRTLG-STSADEVQRMMAE 46 (78)
T ss_dssp EECHHHHHHHHHHHH-TCCHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHhC-CCCHHHHHHHHHH
Confidence 689999998876666 8888887766544
No 66
>2e9x_A DNA replication complex GINS protein PSF1; eukaryotic DNA replication; HET: DNA; 2.30A {Homo sapiens} SCOP: a.278.1.1 PDB: 2eho_B*
Probab=25.35 E-value=1.1e+02 Score=22.30 Aligned_cols=31 Identities=19% Similarity=0.360 Sum_probs=25.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcc---CCCCC
Q 032246 73 SLTPHEVEEFAPKIRQVIDWFGQLQD---VDLDS 103 (144)
Q Consensus 73 ~L~EEEle~l~~eLn~IL~~~d~L~e---VDTeg 103 (144)
.++++|.+-+.+--+-+-+|+..+.+ +|.++
T Consensus 105 ~LS~~E~~f~~~Y~~lL~~y~~~~~~~~~ldlt~ 138 (149)
T 2e9x_A 105 HMAAEEMEWFNNYKRSLATYMRSLGGDEGLDITQ 138 (149)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHSSSSSCCCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhcCcccccCCCC
Confidence 57889988888888888889998874 77766
No 67
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=25.29 E-value=91 Score=20.54 Aligned_cols=38 Identities=5% Similarity=0.103 Sum_probs=27.3
Q ss_pred CCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 48 NCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 48 ~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
.+.+...+ .|+.+|++++..-....+++++++.+...+
T Consensus 99 ~~D~d~~G-~I~~~el~~~l~~~g~~~~~~~~~~~~~~~ 136 (158)
T 2jnf_A 99 LYDKEGNG-YISTDVMREILAELDETLSSEDLDAMIDEI 136 (158)
T ss_dssp HHCSSSSS-SEEHHHHHHHHHHHCTTCCHHHHHHHHHHH
T ss_pred HhCCCCCC-eEcHHHHHHHHHHhCCcCCHHHHHHHHHHh
Confidence 34443333 699999999998888889988877665443
No 68
>2veb_A Protoglobin; hemoprotein structure, protein matrix tunnels, methanogenesis, archaea protein, transport protein; HET: HEM; 1.30A {Methanosarcina acetivorans} PDB: 2vee_A* 3r0g_A* 3qzz_A* 3qzx_A*
Probab=25.17 E-value=74 Score=25.05 Aligned_cols=35 Identities=17% Similarity=0.259 Sum_probs=25.1
Q ss_pred CCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 032246 49 CSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (144)
Q Consensus 49 ~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~e 85 (144)
|++....|.|+.+++++|-.+ +.++|++.+.+..-
T Consensus 11 ~g~~~~~~~i~m~~le~Lk~~--~~fTeeD~~~L~~l 45 (195)
T 2veb_A 11 YGETENRAPFNLEDLKLLKEA--VMFTAEDEEYIQKA 45 (195)
T ss_dssp TTCCCCCCSCCHHHHHHHHHH--HTCCHHHHHHHHHH
T ss_pred CCCccccCCccHHHHHHHHHH--hCCCHHHHHHHHHh
Confidence 444446789999999999765 56778887765543
No 69
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=25.03 E-value=67 Score=22.65 Aligned_cols=41 Identities=17% Similarity=0.359 Sum_probs=30.9
Q ss_pred CcccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 032246 44 NRTRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (144)
Q Consensus 44 ~~~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~e 85 (144)
..++.++....+ .|+.+|++++..-....+++++++.+...
T Consensus 107 ~~F~~~D~d~~G-~I~~~el~~~l~~~g~~~~~~~~~~l~~~ 147 (198)
T 1juo_A 107 QHFISFDTDRSG-TVDPQELQKALTTMGFRLSPQAVNSIAKR 147 (198)
T ss_dssp HHHHTTCTTCCS-EECHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHHhCCCCCC-cCCHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 335556554444 69999999998887888999998887765
No 70
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=25.01 E-value=32 Score=22.72 Aligned_cols=38 Identities=16% Similarity=0.117 Sum_probs=27.9
Q ss_pred cccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHH
Q 032246 45 RTRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFA 83 (144)
Q Consensus 45 ~~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~ 83 (144)
.++.+.....+ .|+.+|++++..-....++++|++.+.
T Consensus 92 ~F~~~D~d~~G-~I~~~el~~~l~~~g~~~~~~~~~~~~ 129 (151)
T 1w7j_B 92 GFRVFDKEGNG-KVMGAELRHVLTTLGEKMTEEEVETVL 129 (151)
T ss_dssp HHHTTCTTSSS-EEEHHHHHHHHHHSSSCCCHHHHHHHH
T ss_pred HHHHhCCCCCC-cCcHHHHHHHHHHcCCCCCHHHHHHHH
Confidence 34455554444 699999999998888889998877664
No 71
>3boq_A Transcriptional regulator, MARR family; MARR famil structural genomics, PSI-2, protein structure initiative; 2.39A {Silicibacter pomeroyi dss-3}
Probab=24.69 E-value=1.1e+02 Score=20.84 Aligned_cols=28 Identities=7% Similarity=0.208 Sum_probs=19.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhccC
Q 032246 72 ISLTPHEVEEFAPKIRQVIDWFGQLQDV 99 (144)
Q Consensus 72 L~L~EEEle~l~~eLn~IL~~~d~L~eV 99 (144)
=.++++|.+.+.+-|.++.+.++.-..+
T Consensus 132 ~~l~~~e~~~l~~~l~~l~~~l~~~~~~ 159 (160)
T 3boq_A 132 RAVSDQDMVEASAALRGILESMQTGASL 159 (160)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHC------
T ss_pred hcCCHHHHHHHHHHHHHHHHHhhccccc
Confidence 3699999999999999998776654443
No 72
>3s2w_A Transcriptional regulator, MARR family; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 2.45A {Methanosarcina mazei}
Probab=24.33 E-value=1.3e+02 Score=20.57 Aligned_cols=24 Identities=8% Similarity=0.090 Sum_probs=21.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHh
Q 032246 73 SLTPHEVEEFAPKIRQVIDWFGQL 96 (144)
Q Consensus 73 ~L~EEEle~l~~eLn~IL~~~d~L 96 (144)
.++++|.+.+..-|+++.+-++++
T Consensus 135 ~l~~~e~~~l~~~l~~l~~~l~~~ 158 (159)
T 3s2w_A 135 SFDDRQRREITNSLEIMFENGLKI 158 (159)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhc
Confidence 789999999999999999988875
No 73
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=24.25 E-value=95 Score=20.92 Aligned_cols=43 Identities=5% Similarity=0.027 Sum_probs=30.4
Q ss_pred cCcccCCCCCCCCCCCChhHHHHHHHHcCC-CCCHHHHHHHHHHH
Q 032246 43 NNRTRNCSTTTTRSSLEPPDVPRLAQTARI-SLTPHEVEEFAPKI 86 (144)
Q Consensus 43 ~~~~~~~st~~~~M~Is~EeVkkLA~LARL-~L~EEEle~l~~eL 86 (144)
...++.++....+ .|+.+|++++..-... .++++|++.+..++
T Consensus 43 ~~~F~~~D~d~~G-~I~~~el~~~l~~~g~~~~~~~e~~~~~~~~ 86 (135)
T 3h4s_E 43 CKGFSLLADPERH-LITAESLRRNSGILGIEGMSKEDAQGMVREG 86 (135)
T ss_dssp HHHHHHHSBTTTT-BBCHHHHHHHGGGGTCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCC-cCCHHHHHHHHHHhCCCCCCHHHHHHHHHHh
Confidence 3344455554444 7999999999887775 88999887776543
No 74
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=24.20 E-value=1.5e+02 Score=19.21 Aligned_cols=38 Identities=8% Similarity=0.121 Sum_probs=27.7
Q ss_pred cCCCCCCCCCCCChhHHHHHHHH-cCCCCCHHHHHHHHHH
Q 032246 47 RNCSTTTTRSSLEPPDVPRLAQT-ARISLTPHEVEEFAPK 85 (144)
Q Consensus 47 ~~~st~~~~M~Is~EeVkkLA~L-ARL~L~EEEle~l~~e 85 (144)
+.++....+ .|+.+|++++..- ....+++++++.+...
T Consensus 82 ~~~D~d~~G-~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 120 (155)
T 3ll8_B 82 RIYDMDKDG-YISNGELFQVLKMMVGNNLKDTQLQQIVDK 120 (155)
T ss_dssp HHHCTTCSS-CBCHHHHHHHHHHHHGGGSCHHHHHHHHHH
T ss_pred HHhCCCCCC-cCcHHHHHHHHHHHhccCCCHHHHHHHHHH
Confidence 334443333 6999999998887 5788999988777665
No 75
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=24.18 E-value=71 Score=21.13 Aligned_cols=40 Identities=8% Similarity=0.102 Sum_probs=29.3
Q ss_pred cccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 032246 45 RTRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (144)
Q Consensus 45 ~~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~e 85 (144)
.++.+.....+ .|+.+|++++..-....++++|++.+...
T Consensus 89 ~F~~~D~d~~G-~I~~~el~~~l~~~g~~~~~~~~~~~~~~ 128 (156)
T 1wdc_C 89 AFKTFDREGQG-FISGAELRHVLTALGERLSDEDVDEIIKL 128 (156)
T ss_dssp HHHTTCSSSSS-EEEHHHHHHHHHHSSSCCCHHHHHHHHHH
T ss_pred HHHHhCCCCCC-cCcHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 34455554444 69999999998877778999888777655
No 76
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=24.01 E-value=76 Score=19.15 Aligned_cols=29 Identities=24% Similarity=0.399 Sum_probs=22.6
Q ss_pred CCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 57 SLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 57 ~Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
.|+.+|++++..... .+++++++.+...+
T Consensus 27 ~i~~~el~~~l~~~g-~~~~~~~~~~~~~~ 55 (86)
T 2opo_A 27 KISSSELGDALKTLG-SVTPDEVRRMMAEI 55 (86)
T ss_dssp EEEHHHHHHHHHTTT-TCCHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHcC-CCCHHHHHHHHHHh
Confidence 689999998887666 78888877665544
No 77
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=23.90 E-value=81 Score=19.84 Aligned_cols=41 Identities=12% Similarity=0.122 Sum_probs=27.6
Q ss_pred cccCCCCCCCCCCCChhHHHHHHHHc---CCCCCHHHHHHHHHHH
Q 032246 45 RTRNCSTTTTRSSLEPPDVPRLAQTA---RISLTPHEVEEFAPKI 86 (144)
Q Consensus 45 ~~~~~st~~~~M~Is~EeVkkLA~LA---RL~L~EEEle~l~~eL 86 (144)
.++.+.+...+ .|+.+|++++..-. ...++++|++.+...+
T Consensus 47 ~F~~~D~d~~G-~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~ 90 (110)
T 1pva_A 47 VFKAIDADASG-FIEEEELKFVLKSFAADGRDLTDAETKAFLKAA 90 (110)
T ss_dssp HHHHHCTTCSS-SBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHH
T ss_pred HHHHhCCCCCC-cCcHHHHHHHHHHHhhcCCCCCHHHHHHHHHHh
Confidence 34444444444 69999999987766 5678888877665543
No 78
>2h5n_A Hypothetical protein PG_1108; SAD, MCSG,PSI, structural genomics, PR structure initiative; 2.01A {Porphyromonas gingivalis} SCOP: a.287.1.2
Probab=23.68 E-value=97 Score=21.93 Aligned_cols=31 Identities=6% Similarity=0.246 Sum_probs=24.8
Q ss_pred CCChhHHHHHHHHcC-CCCCHHHHHHHHHHHH
Q 032246 57 SLEPPDVPRLAQTAR-ISLTPHEVEEFAPKIR 87 (144)
Q Consensus 57 ~Is~EeVkkLA~LAR-L~L~EEEle~l~~eLn 87 (144)
.++++|.+.+..+.+ ++++++|.+++...++
T Consensus 34 ~v~~~E~~~l~~~l~~lgl~~~e~~~l~~~~~ 65 (133)
T 2h5n_A 34 KIKPAEIAVMTREFMRFGILQDQVDLLLKASD 65 (133)
T ss_dssp CCCHHHHHHHHHHHGGGTCCHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHH
Confidence 578888888887765 8889888888887774
No 79
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=23.55 E-value=93 Score=19.57 Aligned_cols=39 Identities=15% Similarity=0.091 Sum_probs=26.8
Q ss_pred ccCCCCCCCCCCCChhHHHHHHHHc---CCCCCHHHHHHHHHH
Q 032246 46 TRNCSTTTTRSSLEPPDVPRLAQTA---RISLTPHEVEEFAPK 85 (144)
Q Consensus 46 ~~~~st~~~~M~Is~EeVkkLA~LA---RL~L~EEEle~l~~e 85 (144)
++.+.....+ .|+.+|++++..-. ...++++|++.+.+.
T Consensus 48 F~~~D~d~~G-~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~ 89 (109)
T 1bu3_A 48 FFVIDQDKSG-FIEEDELKLFLQVFSAGARALTDAETKAFLKA 89 (109)
T ss_dssp HHHHCTTCSS-SEEHHHHHTHHHHHSTTCCCCCHHHHHHHHHH
T ss_pred HHHHCCCCCC-cCcHHHHHHHHHHHcccCCCCCHHHHHHHHHH
Confidence 3344443333 68999999988776 677898887766544
No 80
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=23.53 E-value=1e+02 Score=20.79 Aligned_cols=38 Identities=11% Similarity=-0.030 Sum_probs=26.9
Q ss_pred cCcccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHH
Q 032246 43 NNRTRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAP 84 (144)
Q Consensus 43 ~~~~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~ 84 (144)
...+..++. .. -.|+.+|++.+-.- +.++++|++++.+
T Consensus 18 ~~~F~~~D~-~d-G~Is~~el~~~l~~--~gl~~~el~~i~~ 55 (106)
T 1eh2_A 18 DAIFDSLSP-VN-GFLSGDKVKPVLLN--SKLPVDILGRVWE 55 (106)
T ss_dssp HHHHTTSCC-SS-SCCBHHHHHHHHHT--TTCCHHHHHHHHH
T ss_pred HHHHHHhCC-CC-CeEcHHHHHHHHHH--cCCCHHHHHHHHH
Confidence 334556666 33 47999999988764 5688888888764
No 81
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=23.49 E-value=1.8e+02 Score=19.84 Aligned_cols=43 Identities=9% Similarity=0.052 Sum_probs=30.5
Q ss_pred CCCCCCCCCChhHHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHH
Q 032246 50 STTTTRSSLEPPDVPRLAQTA----RISLTPHEVEEFAPKIRQVIDWF 93 (144)
Q Consensus 50 st~~~~M~Is~EeVkkLA~LA----RL~L~EEEle~l~~eLn~IL~~~ 93 (144)
.+... -.|+.+|+..+..-. -...++++++.+...+..+.+.+
T Consensus 23 D~d~d-G~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~ 69 (191)
T 2ccm_A 23 DCNHD-GVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGL 69 (191)
T ss_dssp CTTCS-SEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHH
T ss_pred cCCCC-CeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHH
Confidence 44333 378999998887765 78889999888876666554443
No 82
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=23.00 E-value=1.3e+02 Score=19.65 Aligned_cols=40 Identities=8% Similarity=0.157 Sum_probs=27.4
Q ss_pred ccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 46 TRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 46 ~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
++.+++...+ .|+.+|++++..-....+++++++.+...+
T Consensus 102 F~~~D~d~~G-~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~ 141 (162)
T 1top_A 102 FRIFDKNADG-FIDIEELGEILRATGEHVTEEDIEDLMKDS 141 (162)
T ss_dssp HHHHCTTCSS-CBCHHHHHHHHHTTTCCCCHHHHHHHHHHH
T ss_pred HHHhCCCCCC-cCcHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 3344444343 699999999987766778988877665443
No 83
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=22.86 E-value=85 Score=19.73 Aligned_cols=40 Identities=15% Similarity=0.115 Sum_probs=26.6
Q ss_pred cccCCCCCCCCCCCChhHHHHHHHHc---CCCCCHHHHHHHHHH
Q 032246 45 RTRNCSTTTTRSSLEPPDVPRLAQTA---RISLTPHEVEEFAPK 85 (144)
Q Consensus 45 ~~~~~st~~~~M~Is~EeVkkLA~LA---RL~L~EEEle~l~~e 85 (144)
.++.+.....+ .|+.+|++++..-. ...++++|++.+...
T Consensus 46 ~F~~~D~d~~G-~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~ 88 (108)
T 2pvb_A 46 AFYVIDQDKSG-FIEEDELKLFLQNFSPSARALTDAETKAFLAD 88 (108)
T ss_dssp HHHHHCTTCSS-SBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHH
T ss_pred HHHHHCCCCCC-cCCHHHHHHHHHHHhccCCCCCHHHHHHHHHH
Confidence 33444443333 79999999887765 567898887766544
No 84
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=22.71 E-value=82 Score=19.84 Aligned_cols=40 Identities=13% Similarity=0.081 Sum_probs=27.7
Q ss_pred cccCCCCCCCCCCCChhHHHHHHHHc---CCCCCHHHHHHHHHH
Q 032246 45 RTRNCSTTTTRSSLEPPDVPRLAQTA---RISLTPHEVEEFAPK 85 (144)
Q Consensus 45 ~~~~~st~~~~M~Is~EeVkkLA~LA---RL~L~EEEle~l~~e 85 (144)
.++.+++..++ .|+.+|++++.... ...+++++++.+.+.
T Consensus 47 ~F~~~D~d~~G-~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~ 89 (109)
T 3fs7_A 47 VFGILDQDKSG-FIEEEELQLFLKNFSSSARVLTSAETKAFLAA 89 (109)
T ss_dssp HHHHHSTTCSS-SBCHHHHHTTGGGTCTTSCCCCHHHHHHHHHH
T ss_pred HHHHHCCCCCC-eEeHHHHHHHHHHHhcccccCCHHHHHHHHHH
Confidence 34445544444 79999999987776 678898887666543
No 85
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=22.46 E-value=59 Score=19.45 Aligned_cols=30 Identities=23% Similarity=0.187 Sum_probs=22.9
Q ss_pred CCChhHHHHHHHHcC-CCCCHHHHHHHHHHH
Q 032246 57 SLEPPDVPRLAQTAR-ISLTPHEVEEFAPKI 86 (144)
Q Consensus 57 ~Is~EeVkkLA~LAR-L~L~EEEle~l~~eL 86 (144)
.|+.+|++++..-.. ..+++++++.+...+
T Consensus 24 ~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~ 54 (81)
T 1c7v_A 24 VIDFDEFKFIMQKVGEEPLTDAEVEEAMKEA 54 (81)
T ss_dssp EECHHHHHHHSSTTTTCCCCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHhCCCCCCHHHHHHHHHHh
Confidence 689999998876655 678888887766554
No 86
>3bj6_A Transcriptional regulator, MARR family; helix-turn-helix, trasnscription regulator, STR genomics, PSI-2, protein structure initiative; 2.01A {Silicibacter pomeroyi dss-3}
Probab=21.93 E-value=1.3e+02 Score=20.03 Aligned_cols=26 Identities=12% Similarity=0.249 Sum_probs=22.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhc
Q 032246 72 ISLTPHEVEEFAPKIRQVIDWFGQLQ 97 (144)
Q Consensus 72 L~L~EEEle~l~~eLn~IL~~~d~L~ 97 (144)
=.++++|.+.+..-|+++.+.++...
T Consensus 124 ~~l~~~e~~~l~~~l~~l~~~l~~~~ 149 (152)
T 3bj6_A 124 EGFSSVELTAYHKVQLALTRFFADLA 149 (152)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 37899999999999999998887654
No 87
>3v5w_G G gamma-I, guanine nucleotide-binding protein G(I)/G(S)/G(O) gamma-2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Bos taurus} PDB: 1xhm_B 3pvu_G* 3cik_G 3krw_G* 3krx_G* 3psc_G 1omw_G* 3pvw_G* 3uzs_G 1gp2_G* 1gg2_G* 2bcj_G* 3ah8_G* 2qns_B 3kj5_B 3sn6_G*
Probab=21.49 E-value=76 Score=21.75 Aligned_cols=53 Identities=21% Similarity=0.312 Sum_probs=35.2
Q ss_pred CCChhHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccCC--CCCCCCCCCccc
Q 032246 57 SLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRA--GFKNPFQPPFFF 122 (144)
Q Consensus 57 ~Is~EeVkkLA~LARL~L~EEEle~l~~eLn~IL~~~d~L~eVDTegVEPm~hp--~~~NvLREDv~~ 122 (144)
.-..|+++.=|.+-|+.++ +--.++++|+++=..= +|+..+ ...|++||...+
T Consensus 19 rk~VeQLr~Ea~i~RikVS--------qaaadL~~yc~~~~~~-----DpLl~Gvp~~~NPFkeKk~~ 73 (77)
T 3v5w_G 19 RKLVEQLKMEANIDRIKVS--------KAAADLMAYCEAHAKE-----DPLLTPVPASENPFREKKFF 73 (77)
T ss_dssp HHHHHHHHHHHSSCCCCHH--------HHHHHHHHHHHHSGGG-----CTTTSCCCGGGCTTTTC---
T ss_pred HHHHHHHHHHhccchhhHH--------HHHHHHHHHHHhcCCC-----CCCcCCCCCCCCCCCCCcCc
Confidence 3356777777888888865 5556778888764433 466655 567999997764
No 88
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=21.35 E-value=1e+02 Score=20.19 Aligned_cols=36 Identities=11% Similarity=0.073 Sum_probs=24.5
Q ss_pred cCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 032246 47 RNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (144)
Q Consensus 47 ~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~e 85 (144)
+.+.....+ .|+.+|++++.. ++.++++|++++.+.
T Consensus 18 ~~~D~d~dG-~Is~~el~~~l~--~~~l~~~~l~~i~~~ 53 (99)
T 1qjt_A 18 RQVEAGNTG-RVLALDAAAFLK--KSGLPDLILGKIWDL 53 (99)
T ss_dssp HHHCCTTSS-CCCSHHHHHHHH--TSSSCHHHHHHHHHH
T ss_pred HHHCCCCCC-cCCHHHHHHHHH--HcCCCHHHHHHHHHH
Confidence 344444333 799999998865 456888888777654
No 89
>3bdd_A Regulatory protein MARR; putative multiple antibiotic-resistance repressor, structura genomics, joint center for structural genomics, JCSG; 2.20A {Streptococcus suis}
Probab=21.28 E-value=1.4e+02 Score=19.51 Aligned_cols=25 Identities=24% Similarity=0.295 Sum_probs=21.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHh
Q 032246 72 ISLTPHEVEEFAPKIRQVIDWFGQL 96 (144)
Q Consensus 72 L~L~EEEle~l~~eLn~IL~~~d~L 96 (144)
=.++++|.+.+.+-++++.+.++++
T Consensus 116 ~~l~~~e~~~l~~~l~~~~~~l~~~ 140 (142)
T 3bdd_A 116 QILTVEESEQFLATLDKLLIGLQNL 140 (142)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHTS
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 3799999999999999998877643
No 90
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Probab=21.25 E-value=1e+02 Score=18.34 Aligned_cols=28 Identities=14% Similarity=0.188 Sum_probs=22.8
Q ss_pred CCCChhHHHHHHHHcC--CCCCHHHHHHHH
Q 032246 56 SSLEPPDVPRLAQTAR--ISLTPHEVEEFA 83 (144)
Q Consensus 56 M~Is~EeVkkLA~LAR--L~L~EEEle~l~ 83 (144)
-.|+.+|++++..-.. ..++++|++.+.
T Consensus 22 G~i~~~el~~~l~~~~~~~~~~~~~~~~~~ 51 (83)
T 1yx7_A 22 GYVTALELQTFMVTLDAYKALSKDKVKEAS 51 (83)
T ss_dssp SSCSHHHHHHHHHHHTTCTTTTTTTTHHHH
T ss_pred CcCcHHHHHHHHHHHccccCCCHHHHHHHH
Confidence 3799999999988777 788988887744
No 91
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=21.13 E-value=86 Score=21.35 Aligned_cols=39 Identities=10% Similarity=0.049 Sum_probs=28.8
Q ss_pred cCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 47 RNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 47 ~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
+.+.+...+ .|+.+|++++..-....+++++++.+...+
T Consensus 116 ~~~D~d~~G-~Is~~El~~~l~~~g~~~~~~~~~~~~~~~ 154 (191)
T 1uhk_A 116 DIVDKDQNG-AITLDEWKAYTKAAGIIQSSEDCEETFRVC 154 (191)
T ss_dssp HHHCTTCSS-EECHHHHHHHHHHHTSCCSHHHHHHHHHHS
T ss_pred HHhcCCCCC-cCcHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 344443333 699999999998888889999888776543
No 92
>4ioe_A Secreted protein ESXB; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.44A {Bacillus anthracis} PDB: 4iog_A
Probab=21.07 E-value=1.4e+02 Score=18.81 Aligned_cols=12 Identities=25% Similarity=0.634 Sum_probs=6.0
Q ss_pred CCChhHHHHHHH
Q 032246 57 SLEPPDVPRLAQ 68 (144)
Q Consensus 57 ~Is~EeVkkLA~ 68 (144)
.+++++++..|.
T Consensus 8 ~v~~e~l~~~A~ 19 (93)
T 4ioe_A 8 KITPEELERIAG 19 (93)
T ss_dssp CCCHHHHHHHHH
T ss_pred cCCHHHHHHHHH
Confidence 455555555543
No 93
>2f5j_A Mortality factor 4-like protein 1; MRG fold, mainly A-helix, gene regulation; 2.20A {Homo sapiens} PDB: 2aql_A 2lkm_B
Probab=21.02 E-value=1.1e+02 Score=23.24 Aligned_cols=28 Identities=7% Similarity=0.157 Sum_probs=25.0
Q ss_pred HcCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 032246 69 TARISLTPHEVEEFAPKIRQVIDWFGQL 96 (144)
Q Consensus 69 LARL~L~EEEle~l~~eLn~IL~~~d~L 96 (144)
|+.-.++++.+..+.+.++++++|+++=
T Consensus 124 l~~t~~d~~s~~~L~~~l~~fl~fL~~n 151 (181)
T 2f5j_A 124 LAYTPLDEKSLALLLNYLHDFLKYLAKN 151 (181)
T ss_dssp HTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4677999999999999999999999853
No 94
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=20.88 E-value=99 Score=20.50 Aligned_cols=31 Identities=6% Similarity=0.128 Sum_probs=22.6
Q ss_pred CCCChhHHHHHHHH-----cCCCCCHHHHHHHHHHH
Q 032246 56 SSLEPPDVPRLAQT-----ARISLTPHEVEEFAPKI 86 (144)
Q Consensus 56 M~Is~EeVkkLA~L-----ARL~L~EEEle~l~~eL 86 (144)
-.|+++|++++-+- -.-.++++|++++.+++
T Consensus 28 G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~ 63 (98)
T 3n22_A 28 FKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSL 63 (98)
T ss_dssp TSBCHHHHHHHHHHHCHHHHCSSCCHHHHHHHHHHH
T ss_pred CeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHh
Confidence 37999999998763 13467888888876654
No 95
>2olt_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 2.00A {Shewanella oneidensis} PDB: 2iiu_A*
Probab=20.88 E-value=66 Score=24.17 Aligned_cols=38 Identities=5% Similarity=0.022 Sum_probs=22.2
Q ss_pred ChhHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 032246 59 EPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQL 96 (144)
Q Consensus 59 s~EeVkkLA~LARL~L~EEEle~l~~eLn~IL~~~d~L 96 (144)
+.+-..+|.+..-..++.+++-.+..++++|.++++.+
T Consensus 66 ~~~I~~~L~~~~~~P~dredi~~L~~~lD~I~D~~~~~ 103 (227)
T 2olt_A 66 KREIRLTLPSGLFMPVERTDLLELLTQQDKIANKAKDI 103 (227)
T ss_dssp HHHHHHHGGGCCSCSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccccCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445555555666666666666666666666544
No 96
>3fx7_A Putative uncharacterized protein; double helix, unknown function; 1.65A {Helicobacter pylori} SCOP: a.25.5.1 PDB: 2gts_A
Probab=20.79 E-value=1.1e+02 Score=21.64 Aligned_cols=24 Identities=21% Similarity=0.504 Sum_probs=13.4
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHH
Q 032246 70 ARISLTPHEVEEFAPKIRQVIDWF 93 (144)
Q Consensus 70 ARL~L~EEEle~l~~eLn~IL~~~ 93 (144)
|+--.+++|++.++++|.+..+-+
T Consensus 2 ~qa~~dpeElr~Fa~~L~~F~d~L 25 (94)
T 3fx7_A 2 SRVQMDTEEVREFVGHLERFKELL 25 (94)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHHHHHH
Confidence 445566777777776666655544
No 97
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=20.72 E-value=46 Score=21.80 Aligned_cols=30 Identities=7% Similarity=0.035 Sum_probs=23.7
Q ss_pred CCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 57 SLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 57 ~Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
.|+.+|+..+..-.-+.+++++++.+...+
T Consensus 20 ~i~~~el~~~l~~~g~~~~~~~~~~l~~~~ 49 (148)
T 1m45_A 20 AIAKDSLGDYLRAIGYNPTNQLVQDIINAD 49 (148)
T ss_dssp EEEGGGHHHHHHHTTCCCCHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 688999988888778888888888776654
No 98
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=20.42 E-value=1.7e+02 Score=18.68 Aligned_cols=31 Identities=13% Similarity=0.161 Sum_probs=24.4
Q ss_pred CCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 56 M~Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
-.|+.+|+..+..-..+.++++++..+...+
T Consensus 23 G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~ 53 (149)
T 2mys_C 23 AKITASQVGDIARALGQNPTNAEINKILGNP 53 (149)
T ss_pred CcCcHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 3689999998877777788888888777655
No 99
>1z91_A Organic hydroperoxide resistance transcriptional; OHRR, MARR family, bacterial transcription factor, DNA bindi protein; 2.50A {Bacillus subtilis} SCOP: a.4.5.28 PDB: 1z9c_A*
Probab=20.18 E-value=1e+02 Score=20.49 Aligned_cols=31 Identities=0% Similarity=0.069 Sum_probs=22.9
Q ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Q 032246 62 DVPRLAQTARISLTPHEVEEFAPKIRQVIDWFG 94 (144)
Q Consensus 62 eVkkLA~LARL~L~EEEle~l~~eLn~IL~~~d 94 (144)
.+..+..-. .++++|++.+..-++++.+.++
T Consensus 114 ~~~~~~~~~--~l~~~e~~~l~~~l~~l~~~l~ 144 (147)
T 1z91_A 114 IPGTILGLS--KQSGEDLKQLKSALYTLLETLH 144 (147)
T ss_dssp HHHHHHHHT--CCCTHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHh
Confidence 344444443 9999999999999998877654
No 100
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=20.10 E-value=1.5e+02 Score=19.42 Aligned_cols=41 Identities=7% Similarity=0.048 Sum_probs=29.4
Q ss_pred cccCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 45 RTRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 45 ~~~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
.+..++....+ .|+.+|+.++.+...+.+++++++.+...+
T Consensus 28 ~F~~~D~~~~G-~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~ 68 (161)
T 3fwb_A 28 AFSLFDMNNDG-FLDYHELKVAMKALGFELPKREILDLIDEY 68 (161)
T ss_dssp HHHHHCTTSSS-EECHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred HHHHHCCCCCC-cCcHHHHHHHHHHcCCCCCHHHHHHHHHHh
Confidence 33344443333 689999999988888889999888776553
No 101
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=20.07 E-value=1.2e+02 Score=21.07 Aligned_cols=37 Identities=11% Similarity=0.249 Sum_probs=25.7
Q ss_pred cCCCCCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 032246 47 RNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (144)
Q Consensus 47 ~~~st~~~~M~Is~EeVkkLA~LARL~L~EEEle~l~~eL 86 (144)
+.+++...+ .|+.+|++++.. ...++++|++.+...+
T Consensus 115 ~~~D~d~~G-~I~~~El~~~l~--~~~~~~~~~~~~~~~~ 151 (180)
T 3mse_B 115 NKIDKDEDG-YISKSDIVSLVH--DKVLDNNDIDNFFLSV 151 (180)
T ss_dssp HHHCTTCSS-CBCHHHHHHHTT--TSSCCHHHHHHHHHHH
T ss_pred HHHCCCCCC-CCCHHHHHHHHc--CCCCCHHHHHHHHHHh
Confidence 334443333 799999999987 6788888877665544
Done!