BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032248
MRNKVSEMSGRDAEVVRVVVSPYRICPLGAHIDHQGGTVSAMTINKGILLGFVPSGDTEV
VLRSGQFDGEVRFSIDEIQQPRNSVKKHHVVHASDSAKIKEECKWGNYARGALYALQSRG
NNLTQVKMFLCCHFMNHLFALSYG

High Scoring Gene Products

Symbol, full name Information P value
GalAK
AT3G10700 		protein from Arabidopsis thaliana 8.9e-38

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032248
        (144 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2075730 - symbol:GalAK "galacturonic acid kina...   405  8.9e-38   1


>TAIR|locus:2075730 [details] [associations]
            symbol:GalAK "galacturonic acid kinase" species:3702
            "Arabidopsis thaliana" [GO:0004335 "galactokinase activity"
            evidence=IEA;ISS;IDA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
            [GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006012 "galactose
            metabolic process" evidence=IEA] [GO:0008152 "metabolic process"
            evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
            [GO:0016773 "phosphotransferase activity, alcohol group as
            acceptor" evidence=IEA] [GO:0046835 "carbohydrate phosphorylation"
            evidence=IEA;IDA] [GO:0046396 "D-galacturonate metabolic process"
            evidence=IDA] [GO:0047912 "galacturonokinase activity"
            evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            InterPro:IPR000705 InterPro:IPR006204 InterPro:IPR006206
            Pfam:PF00288 PIRSF:PIRSF000530 PRINTS:PR00473 PRINTS:PR00959
            PROSITE:PS00627 GO:GO:0005829 GO:GO:0005524 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0046872 EMBL:AC011560 EMBL:AC011708
            GO:GO:0006012 eggNOG:COG0153 Gene3D:3.30.230.10 InterPro:IPR020568
            InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR013750 Pfam:PF08544
            KO:K00849 EMBL:FJ439676 EMBL:AY072103 EMBL:AY096732 IPI:IPI00522983
            RefSeq:NP_187681.2 UniGene:At.39881 HSSP:Q9R7D7
            ProteinModelPortal:Q8VYG2 SMR:Q8VYG2 STRING:Q8VYG2 PaxDb:Q8VYG2
            PRIDE:Q8VYG2 EnsemblPlants:AT3G10700.1 GeneID:820239
            KEGG:ath:AT3G10700 TAIR:At3g10700 HOGENOM:HOG000083795
            InParanoid:Q8VYG2 OMA:VRECHDA PhylomeDB:Q8VYG2 ProtClustDB:PLN02865
            Genevestigator:Q8VYG2 GO:GO:0047912 GO:GO:0046835 GO:GO:0046396
            Uniprot:Q8VYG2
        Length = 424

 Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
 Identities = 83/125 (66%), Positives = 95/125 (76%)

Query:     1 MRNKVSEMSGRDAEVVRVVVSPYRICPLGAHIDHQGGTVSAMTINKGILLGFVPSGDTEV 60
             ++  V++MSGRD   VRVVV+PYRICPLGAHIDHQGGTVSAMTINKGILLGFVPSGDT+V
Sbjct:    12 IKEAVAQMSGRDKGEVRVVVAPYRICPLGAHIDHQGGTVSAMTINKGILLGFVPSGDTQV 71

Query:    61 VLRSGQFDGEVRFSIDEIQQPRNSVKKHHVVHASDSAKIKEECKWGNYARGALYALQSRG 120
              LRS QF+GEV F +DEIQ P     K+    AS  +  KE+  WG YARGA+YALQS  
Sbjct:    72 QLRSAQFEGEVCFRVDEIQHPIGLANKNG---ASTPSPSKEKSIWGTYARGAVYALQSSK 128

Query:   121 NNLTQ 125
              NL Q
Sbjct:   129 KNLKQ 133


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.136   0.410    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      144       144   0.00091  102 3  11 22  0.42    31
                                                     30  0.48    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  587 (62 KB)
  Total size of DFA:  138 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.47u 0.14s 13.61t   Elapsed:  00:00:01
  Total cpu time:  13.47u 0.14s 13.61t   Elapsed:  00:00:01
  Start:  Fri May 10 23:07:44 2013   End:  Fri May 10 23:07:45 2013

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