Query 032249
Match_columns 144
No_of_seqs 154 out of 1014
Neff 8.2
Searched_HMMs 13730
Date Mon Mar 25 18:51:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032249.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032249hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1yvia1 a.24.10.2 (A:2-143) Hi 100.0 3E-28 2.2E-32 169.2 16.6 140 3-143 2-142 (142)
2 d2a0ba_ a.24.10.1 (A:) Aerobic 99.9 4.6E-23 3.4E-27 138.2 10.1 114 19-137 3-116 (118)
3 d2r25a1 a.24.10.2 (A:2-167) Ph 99.9 7.3E-22 5.3E-26 139.9 15.1 119 16-136 1-163 (166)
4 d1y6da_ a.24.10.5 (A:) Phospho 99.8 1.2E-22 9E-27 135.2 1.5 112 19-135 2-113 (114)
5 d1sr2a_ a.24.10.4 (A:) Sensor- 99.8 4.2E-20 3E-24 123.5 4.9 108 17-127 8-115 (116)
6 d2ooca1 a.24.10.6 (A:8-111) Hi 99.7 1.9E-17 1.4E-21 108.5 7.0 96 21-136 1-96 (104)
7 d1tqga_ a.24.10.3 (A:) Chemota 99.1 4.4E-10 3.2E-14 72.6 9.4 88 45-132 5-101 (105)
8 d1i5na_ a.24.10.3 (A:) Chemota 99.1 8.1E-10 5.9E-14 73.6 10.0 89 45-133 4-101 (128)
9 d1nzea_ a.24.18.1 (A:) Oxygen- 83.5 3.3 0.00024 25.3 9.3 74 51-126 15-106 (112)
10 d1fpoa2 a.23.1.1 (A:77-171) HS 81.8 2.9 0.00021 24.7 6.4 42 39-82 34-75 (95)
11 d256ba_ a.24.3.1 (A:) Cytochro 62.7 13 0.00091 22.2 7.4 40 88-127 62-101 (106)
12 d1st6a3 a.24.9.1 (A:253-371) V 55.0 20 0.0014 22.0 8.3 62 72-133 47-117 (119)
13 d1wa8a1 a.25.3.1 (A:1-99) ESAT 51.8 18 0.0013 20.6 7.3 72 70-142 5-79 (99)
14 d1wjta_ a.48.3.1 (A:) Transcri 48.9 9.8 0.00071 22.7 3.7 31 91-121 11-41 (103)
15 d1h2vc1 a.118.1.14 (C:29-290) 46.8 39 0.0028 23.0 11.1 105 25-138 55-178 (262)
16 d2f4mb1 a.189.1.1 (B:275-332) 44.8 11 0.00078 20.2 3.0 39 24-63 7-45 (58)
17 d2di0a1 a.5.2.4 (A:8-70) Activ 43.2 14 0.001 20.1 3.4 37 26-62 8-44 (63)
18 d1s35a1 a.7.1.1 (A:1063-1168) 41.2 27 0.002 19.6 9.6 72 69-140 28-104 (106)
19 d1st6a4 a.24.9.1 (A:372-488) V 37.4 40 0.0029 20.4 8.8 64 73-136 38-111 (117)
20 d2f1ka1 a.100.1.12 (A:166-279) 36.9 38 0.0027 20.0 7.8 51 28-81 47-104 (114)
21 d1fpoa2 a.23.1.1 (A:77-171) HS 35.3 36 0.0026 19.4 6.3 75 49-134 14-88 (95)
22 d1st6a5 a.24.9.1 (A:489-646) V 34.4 52 0.0038 20.9 8.4 61 75-135 34-103 (158)
23 d1fi4a2 d.58.26.2 (A:191-393) 28.9 48 0.0035 22.0 5.0 32 46-79 31-63 (203)
No 1
>d1yvia1 a.24.10.2 (A:2-143) Histidine-containing phosphotransfer protein HP1 {Rice (Oryza sativa) [TaxId: 4530]}
Probab=99.96 E-value=3e-28 Score=169.15 Aligned_cols=140 Identities=37% Similarity=0.705 Sum_probs=128.1
Q ss_pred hhHHHHHHHHhHhccCCCCCCCHHHHHHHHcccc-CCChHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCHHHHHHHHHh
Q 032249 3 SNQLQHQVLYMRRSLFDQGYLDSEQLIQLEDLQD-DANPNFVEEVVSLFYSDSARLIQNIEQTLSNRPVDFSRLDDILHQ 81 (144)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~lD~~~l~~L~~l~~-~~~~~~~~~ll~~Fl~~~~~~l~~L~~a~~~~~~D~~~l~~~aH~ 81 (144)
+.-|++++..+.++++++|++|. .|.++..+.+ +|+|+|+.+++..|+++.+..+..|..+++..++||..++..+|+
T Consensus 2 ~~~l~~~~~~~~~~~~~~g~lD~-~f~~l~~l~~~~~~~~fl~eli~~Fl~~~~~~l~~l~~al~~~~~D~~~~~~~aH~ 80 (142)
T d1yvia1 2 AAALRDQLTALLSSMFSQGLVDE-QFQQLQMLQDEGGTPGFVSEVVTLFCDDADRIINEIATLLEQPVVNFDKVDAYVHQ 80 (142)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCH-HHHHHHHHHC---CTTHHHHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhHHhcccccH-HHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 35689999999999999999995 6777766654 478999999999999999999999999997545699999999999
Q ss_pred hhhhhhhhcHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhh
Q 032249 82 FKGSCSSIGAKKVKDACSQFREYCNAGNAEGCSRSFQLIKQEYETLRRRLESYFQMVKQAKA 143 (144)
Q Consensus 82 LKGss~~lGa~~L~~~~~~lE~~~~~~~~~~~~~~~~~l~~~~~~~~~~L~~~l~~~~~~~~ 143 (144)
|||+|+++|+.+++.+|..||.+++.++.+.+...+..|+.+|..++..|+.|++.++|.-|
T Consensus 81 LKGss~~lGa~~l~~~~~~lE~~~~~~~~~~~~~~~~~L~~e~~~l~~~L~~~l~~~~qi~~ 142 (142)
T d1yvia1 81 LKGSSASVGAQKVKFTCMQFRQFCQDKSRDGCLMALAVVRNDFYDLRNKFQTMLQLEQQIQA 142 (142)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhHHhhccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhC
Confidence 99999999999999999999999999999999999999999999999999999999999754
No 2
>d2a0ba_ a.24.10.1 (A:) Aerobic respiration control sensor protein, ArcB {Escherichia coli [TaxId: 562]}
Probab=99.89 E-value=4.6e-23 Score=138.17 Aligned_cols=114 Identities=17% Similarity=0.258 Sum_probs=107.2
Q ss_pred CCCCCCHHHHHHHHccccCCChHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCHHHHHHHHHhhhhhhhhhcHHHHHHHH
Q 032249 19 DQGYLDSEQLIQLEDLQDDANPNFVEEVVSLFYSDSARLIQNIEQTLSNRPVDFSRLDDILHQFKGSCSSIGAKKVKDAC 98 (144)
Q Consensus 19 ~~~~lD~~~l~~L~~l~~~~~~~~~~~ll~~Fl~~~~~~l~~L~~a~~~~~~D~~~l~~~aH~LKGss~~lGa~~L~~~~ 98 (144)
++++||++++.++... .+++++.+++..|+++.+..+..|+.++. .+|+..+++.+|+|||+|+++|+..|+.+|
T Consensus 3 ~e~~lD~~~L~~l~~~---~g~~~~~~~l~~F~~~~~~~l~~l~~a~~--~~d~~~~~~~aH~LKgsa~~~G~~~l~~~~ 77 (118)
T d2a0ba_ 3 SEALLDIPMLEQYLEL---VGPKLITDGLAVFEKMMPGYVSVLESNLT--AQDKKGIVEEGHKIKGAAGSVGLRHLQQLG 77 (118)
T ss_dssp HHHHSCHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred ccccCCHHHHHHHHHH---hCHHHHHHHHHHHHHHhHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 4578999999999877 46899999999999999999999999997 479999999999999999999999999999
Q ss_pred HHHHHHHHcCChhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 032249 99 SQFREYCNAGNAEGCSRSFQLIKQEYETLRRRLESYFQM 137 (144)
Q Consensus 99 ~~lE~~~~~~~~~~~~~~~~~l~~~~~~~~~~L~~~l~~ 137 (144)
..||..++.++.+.+..++..|...+.....+|+.|+..
T Consensus 78 ~~lE~~~~~~~~~~~~~~l~~l~~~~~~~~~~L~~~l~~ 116 (118)
T d2a0ba_ 78 QQIQSPDLPAWEDNVGEWIEEMKEEWRHDVEVLKAWVAK 116 (118)
T ss_dssp HHHTCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999875
No 3
>d2r25a1 a.24.10.2 (A:2-167) Phosphorelay protein ypd1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.88 E-value=7.3e-22 Score=139.90 Aligned_cols=119 Identities=15% Similarity=0.344 Sum_probs=103.9
Q ss_pred ccCCCCCCCHHHHHHHHccccCCChHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCHHHHHHHHHhhhhhhhhhcHHHHH
Q 032249 16 SLFDQGYLDSEQLIQLEDLQDDANPNFVEEVVSLFYSDSARLIQNIEQTLSNRPVDFSRLDDILHQFKGSCSSIGAKKVK 95 (144)
Q Consensus 16 ~~~~~~~lD~~~l~~L~~l~~~~~~~~~~~ll~~Fl~~~~~~l~~L~~a~~~~~~D~~~l~~~aH~LKGss~~lGa~~L~ 95 (144)
|..+..+||+.+|++|..+.+ ++++|+.+++..|+++++..+..|+.++.+ .+|+..+...+|+|||+|+++|+.++.
T Consensus 1 ~~~p~~~id~~~l~~l~~m~~-~d~~f~~~li~~F~~~~~~~~~~l~~al~~-~~d~~~l~~~aH~lKgss~~~G~~~~~ 78 (166)
T d2r25a1 1 STIPSEIINWTILNEIISMDD-DDSDFSKGLIIQFIDQAQTTFAQMQRQLDG-EKNLTELDNLGHFLKGSSAALGLQRIA 78 (166)
T ss_dssp CCCCSCSSCHHHHHHHHHTTT-TSSHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCcccccCHHHHHHHHHHhC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHhCHHHHH
Confidence 456788999999999999965 799999999999999999999999999963 469999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCh--------------------------------------------hhHHHHHHHHHHHHHHHHHHH
Q 032249 96 DACSQFREYCNAGNA--------------------------------------------EGCSRSFQLIKQEYETLRRRL 131 (144)
Q Consensus 96 ~~~~~lE~~~~~~~~--------------------------------------------~~~~~~~~~l~~~~~~~~~~L 131 (144)
..|..||+.++.++. ..+...+...+..|..++.+|
T Consensus 79 ~~~~~ie~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~l~~I~~~L~~a~d~~~~a~~~L 158 (166)
T d2r25a1 79 WVCERIQNLGRKMEHFFPNKTELVNTLSDKSIINGINIDEDDEEIKIQVDDKDENSIYLILIAKALNQSRLEFKLARIEL 158 (166)
T ss_dssp HHHHHHHHHHTTCCCCCCCHHHHHTTCSSGGGGSSSCTTTTCCCCCCCSSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccccchhHHHHHHHHHHHHHHHHHhhhhcccccccccCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999885421 124566777788888899999
Q ss_pred HHHHH
Q 032249 132 ESYFQ 136 (144)
Q Consensus 132 ~~~l~ 136 (144)
..|+.
T Consensus 159 ~~~~~ 163 (166)
T d2r25a1 159 SKYYN 163 (166)
T ss_dssp HHHTT
T ss_pred HHHhc
Confidence 88875
No 4
>d1y6da_ a.24.10.5 (A:) Phosphorelay protein luxU {Vibrio harveyi [TaxId: 669]}
Probab=99.84 E-value=1.2e-22 Score=135.21 Aligned_cols=112 Identities=14% Similarity=0.211 Sum_probs=102.8
Q ss_pred CCCCCCHHHHHHHHccccCCChHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCHHHHHHHHHhhhhhhhhhcHHHHHHHH
Q 032249 19 DQGYLDSEQLIQLEDLQDDANPNFVEEVVSLFYSDSARLIQNIEQTLSNRPVDFSRLDDILHQFKGSCSSIGAKKVKDAC 98 (144)
Q Consensus 19 ~~~~lD~~~l~~L~~l~~~~~~~~~~~ll~~Fl~~~~~~l~~L~~a~~~~~~D~~~l~~~aH~LKGss~~lGa~~L~~~~ 98 (144)
++++||..++++|.+.. +++++..++..|+++.+..+..|..++. .+|++.++..+|+|||+|+++|+.+|+.+|
T Consensus 2 ~~~lld~~~l~~L~~~~---G~e~~~~ll~~F~~~~~~~~~~L~~a~~--~~d~~~l~~~aH~LKGsa~~~Ga~~L~~~~ 76 (114)
T d1y6da_ 2 NTDVLNQQKIEELSAEI---GSDNVPVLLDIFLGEMDSYIGTLTELQG--SEQLLYLKEISHALKSSAASFGADRLCERA 76 (114)
T ss_dssp CCTTTTTTHHHHHTHHH---HHHHHHHHHHHHHHHHHHHHHHTTTTSS--HHHHHHHHHHHHHHHHHHHHHTTTHHHHHH
T ss_pred CHHHCCHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHHHHHHHHHHh--CcCHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 57899999999998764 4678999999999999999999999996 479999999999999999999999999999
Q ss_pred HHHHHHHHcCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 032249 99 SQFREYCNAGNAEGCSRSFQLIKQEYETLRRRLESYF 135 (144)
Q Consensus 99 ~~lE~~~~~~~~~~~~~~~~~l~~~~~~~~~~L~~~l 135 (144)
..||..++.++.+.+...+..+...+.+++.++++|.
T Consensus 77 ~~lE~~~~~~~~~~~~~~~~~l~~~~~~t~~a~r~w~ 113 (114)
T d1y6da_ 77 IAIDKKAKANQLQEQGMETSEMLALLHITRDAYRSWT 113 (114)
T ss_dssp HHHHHHHHHHHHCTTTSTTTTTTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCChhHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999998888888888999999999999998884
No 5
>d1sr2a_ a.24.10.4 (A:) Sensor-like histidine kinase YojN, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.78 E-value=4.2e-20 Score=123.55 Aligned_cols=108 Identities=14% Similarity=0.183 Sum_probs=88.5
Q ss_pred cCCCCCCCHHHHHHHHccccCCChHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCHHHHHHHHHhhhhhhhhhcHHHHHH
Q 032249 17 LFDQGYLDSEQLIQLEDLQDDANPNFVEEVVSLFYSDSARLIQNIEQTLSNRPVDFSRLDDILHQFKGSCSSIGAKKVKD 96 (144)
Q Consensus 17 ~~~~~~lD~~~l~~L~~l~~~~~~~~~~~ll~~Fl~~~~~~l~~L~~a~~~~~~D~~~l~~~aH~LKGss~~lGa~~L~~ 96 (144)
..++.++|...+....... ++.+.++.+++..|+++.+.++..|+.+++ .+||..+++.+|+|||+++++|+..+..
T Consensus 8 l~~~~l~~~~~~~~~~~~d-~~~~~~~~~~~~lF~~~~p~~l~~L~~a~~--~~D~~~l~~~aH~LKGs~~~~Ga~~l~~ 84 (116)
T d1sr2a_ 8 LIEVQLAQEEVTESPLGGD-ENAQLHASGYYALFVDTVPDDVKRLYTEAA--TSDFAALAQTAHRLKGVFAMLNLVPGKQ 84 (116)
T ss_dssp SCSSSSCSCCCCCCCSCSS-HHHHHHHHTTHHHHTTTHHHHHHHHHHHHH--HTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHhhhhHHHHHHhHhhcc-cchHHHHHHHHHHHHHhhHHHHHHHHHHHH--CcCHHHHHHHHHHHHHHHHHcCchHHHH
Confidence 3455556644322222211 123557788999999999999999999997 4799999999999999999999999999
Q ss_pred HHHHHHHHHHcCChhhHHHHHHHHHHHHHHH
Q 032249 97 ACSQFREYCNAGNAEGCSRSFQLIKQEYETL 127 (144)
Q Consensus 97 ~~~~lE~~~~~~~~~~~~~~~~~l~~~~~~~ 127 (144)
+|..||..++.++.+.+...+.+|...+.++
T Consensus 85 ~~~~lE~~~~~~~~~~~~~ll~~le~~~~~l 115 (116)
T d1sr2a_ 85 LCETLEHLIREKDVPGIEKYISDIDSYVKSL 115 (116)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998888765
No 6
>d2ooca1 a.24.10.6 (A:8-111) Histidine phosphotransferase ShpA {Caulobacter crescentus [TaxId: 155892]}
Probab=99.69 E-value=1.9e-17 Score=108.51 Aligned_cols=96 Identities=18% Similarity=0.282 Sum_probs=74.6
Q ss_pred CCCCHHHHHHHHccccCCChHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCHHHHHHHHHhhhhhhhhhcHHHHHHHHHH
Q 032249 21 GYLDSEQLIQLEDLQDDANPNFVEEVVSLFYSDSARLIQNIEQTLSNRPVDFSRLDDILHQFKGSCSSIGAKKVKDACSQ 100 (144)
Q Consensus 21 ~~lD~~~l~~L~~l~~~~~~~~~~~ll~~Fl~~~~~~l~~L~~a~~~~~~D~~~l~~~aH~LKGss~~lGa~~L~~~~~~ 100 (144)
|.||++++..+ .+ ||++++.+++..|+++.+..+..+ ..|++.++..+|+|||+|+++|+.+|..+|.+
T Consensus 1 gaiD~~~L~~~---~g-gd~~l~~~ll~~F~e~~~~~~~~l-------~~d~~~~~~~aH~LKGsa~~iGa~~L~~~a~~ 69 (104)
T d2ooca1 1 GAVDFAYLEGF---AA-GDFAVVDEVLALFREQAALWAPML-------DPTHPGWKDAVHTVKGAARGVGAFNLGEVCER 69 (104)
T ss_dssp CCSCHHHHHHH---TT-TCHHHHHHHHHHHHHHHHHHGGGC-------STTSTTHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred CccCHHHHHHH---hC-CCHHHHHHHHHHHHHHHHHHHHHH-------ccCHHHHHHHHHHHHhHHHHcCHHHHHHHHHH
Confidence 46898766654 44 799999999999999999877544 25888999999999999999999999999999
Q ss_pred HHHHHHcCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 032249 101 FREYCNAGNAEGCSRSFQLIKQEYETLRRRLESYFQ 136 (144)
Q Consensus 101 lE~~~~~~~~~~~~~~~~~l~~~~~~~~~~L~~~l~ 136 (144)
||..++.++ .+..++......+.+|++
T Consensus 70 lE~~~~~~~---------~~~~~l~~~~~~i~~~~~ 96 (104)
T d2ooca1 70 CEAGQESLE---------GVRTALDAALLDIAAYAH 96 (104)
T ss_dssp HHTTSSCHH---------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccC---------chHHHHHHHHHHHHHHHH
Confidence 999877532 233444445555555544
No 7
>d1tqga_ a.24.10.3 (A:) Chemotaxis protein CheA P1 domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.08 E-value=4.4e-10 Score=72.57 Aligned_cols=88 Identities=19% Similarity=0.355 Sum_probs=64.5
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhC---CCCC---HHHHHHHHHhhhhhhhhhcHHHHHHHHHHHHHHH---HcCChhhHHH
Q 032249 45 EVVSLFYSDSARLIQNIEQTLSN---RPVD---FSRLDDILHQFKGSCSSIGAKKVKDACSQFREYC---NAGNAEGCSR 115 (144)
Q Consensus 45 ~ll~~Fl~~~~~~l~~L~~a~~~---~~~D---~~~l~~~aH~LKGss~~lGa~~L~~~~~~lE~~~---~~~~~~~~~~ 115 (144)
+++..|++++.+.+..++..+.. ...| ...+.+.+|+|||+|+++|+..+..+|..+|... +.+..+.-..
T Consensus 5 E~l~~Fl~Ea~e~l~~l~~~l~~le~~~~~~~~~~~l~R~~HTLKG~a~~~gl~~i~~lah~lE~~l~~~~~~~~~~~~~ 84 (105)
T d1tqga_ 5 EYLGVFVDETKEYLQNLNDTLLELEKNPEDMELINEAFRALHTLKGMAGTMGFSSMAKLCHTLENILDKARNSEIKITSD 84 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTTSSCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCchhhcCHHHHHHHHHHHHHHHHHHHhCCCCCCHH
Confidence 46999999999999999887721 1123 4678999999999999999999999999999864 3444332334
Q ss_pred HHHHHHHHHHHHHHHHH
Q 032249 116 SFQLIKQEYETLRRRLE 132 (144)
Q Consensus 116 ~~~~l~~~~~~~~~~L~ 132 (144)
.+..+...+..+...+.
T Consensus 85 ~~~~l~~~~d~l~~~l~ 101 (105)
T d1tqga_ 85 LLDKIFAGVDMITRMVD 101 (105)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 55555555555555444
No 8
>d1i5na_ a.24.10.3 (A:) Chemotaxis protein CheA P1 domain {Salmonella typhimurium [TaxId: 90371]}
Probab=99.05 E-value=8.1e-10 Score=73.61 Aligned_cols=89 Identities=15% Similarity=0.337 Sum_probs=65.6
Q ss_pred HHHHHHHHhHHHHHHHHHHHhh---CCCCC---HHHHHHHHHhhhhhhhhhcHHHHHHHHHHHHHHHH---cCChhhHHH
Q 032249 45 EVVSLFYSDSARLIQNIEQTLS---NRPVD---FSRLDDILHQFKGSCSSIGAKKVKDACSQFREYCN---AGNAEGCSR 115 (144)
Q Consensus 45 ~ll~~Fl~~~~~~l~~L~~a~~---~~~~D---~~~l~~~aH~LKGss~~lGa~~L~~~~~~lE~~~~---~~~~~~~~~ 115 (144)
+++..|++++.+.+..++..+. +...| ...+.+.+|+|||+|+++|+..+..+|..+|.... .+...--..
T Consensus 4 e~~~~F~~Ea~e~l~~l~~~l~~le~~~~~~~~~~~l~R~~HTLKG~a~~~gl~~i~~lah~lE~~l~~lr~~~~~~~~~ 83 (128)
T d1i5na_ 4 DFYQTFFDEADELLADMEQHLLDLVPESPDAEQLNAIFRAAHSIKGGAGTFGFTILQETTHLMENLLDEARRGEMQLNTD 83 (128)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHCCTTSCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTSSCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhhHHhhcChHHHHHHHHHHHHHHHHHHhCCCCCCHH
Confidence 4689999999999999999872 22234 35889999999999999999999999999998654 454333334
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 032249 116 SFQLIKQEYETLRRRLES 133 (144)
Q Consensus 116 ~~~~l~~~~~~~~~~L~~ 133 (144)
.+..+...+..+...+..
T Consensus 84 ~~~~l~~~~d~l~~~l~~ 101 (128)
T d1i5na_ 84 IINLFLETKDIMQEQLDA 101 (128)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 455555555555554443
No 9
>d1nzea_ a.24.18.1 (A:) Oxygen-evolving enhancer protein 3, {Spinach (Spinacia oleracea) [TaxId: 3562]}
Probab=83.46 E-value=3.3 Score=25.31 Aligned_cols=74 Identities=14% Similarity=0.122 Sum_probs=46.4
Q ss_pred HHhHHHHHHHHHHHhhCCCCCHHHHHHHHHh--------hhhhhhhhcH----------HHHHHHHHHHHHHHHcCChhh
Q 032249 51 YSDSARLIQNIEQTLSNRPVDFSRLDDILHQ--------FKGSCSSIGA----------KKVKDACSQFREYCNAGNAEG 112 (144)
Q Consensus 51 l~~~~~~l~~L~~a~~~~~~D~~~l~~~aH~--------LKGss~~lGa----------~~L~~~~~~lE~~~~~~~~~~ 112 (144)
+.++.++|..|+..+++ ++|..++...|. |.....+++. ..|......|..+++.++...
T Consensus 15 i~~sa~~L~~l~~lI~k--~~W~~v~~~Lr~~~~~Lr~dl~~li~~~~~~~k~~~~~la~~lf~~le~LD~Aar~kd~~~ 92 (112)
T d1nzea_ 15 AKVSASEILNVKQFIDR--KAWPSLQNDLRLRASYLRYDLKTVISAKPKDEKKSLQELTSKLFSSIDNLDHAAKIKSPTE 92 (112)
T ss_dssp HHHHHHHHHTTHHHHHT--TCHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 35677788899999974 799999988887 2333333322 345666666667777776665
Q ss_pred HHHHHHHHHHHHHH
Q 032249 113 CSRSFQLIKQEYET 126 (144)
Q Consensus 113 ~~~~~~~l~~~~~~ 126 (144)
+...+......+..
T Consensus 93 a~~~Y~~t~~~ld~ 106 (112)
T d1nzea_ 93 AEKYYGQTVSNINE 106 (112)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 55544444444433
No 10
>d1fpoa2 a.23.1.1 (A:77-171) HSC20 (HSCB), C-terminal oligomerisation domain {Escherichia coli [TaxId: 562]}
Probab=81.82 E-value=2.9 Score=24.67 Aligned_cols=42 Identities=10% Similarity=0.040 Sum_probs=19.4
Q ss_pred ChHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCHHHHHHHHHhh
Q 032249 39 NPNFVEEVVSLFYSDSARLIQNIEQTLSNRPVDFSRLDDILHQF 82 (144)
Q Consensus 39 ~~~~~~~ll~~Fl~~~~~~l~~L~~a~~~~~~D~~~l~~~aH~L 82 (144)
|++-+..+....-......+..+..+++ .+||......+.+|
T Consensus 34 d~~~l~~l~~ei~~~~~~~~~~l~~~~~--~~d~~~A~~~~~kL 75 (95)
T d1fpoa2 34 DEARLESFIKRVKKMFDTRHQLMVEQLD--NETWDAAADTCRKL 75 (95)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHh--hccHHHHHHHHHHh
Confidence 4444444444444444444444555444 24555555444444
No 11
>d256ba_ a.24.3.1 (A:) Cytochrome b562 {Escherichia coli [TaxId: 562]}
Probab=62.72 E-value=13 Score=22.21 Aligned_cols=40 Identities=10% Similarity=0.120 Sum_probs=31.7
Q ss_pred hhcHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHH
Q 032249 88 SIGAKKVKDACSQFREYCNAGNAEGCSRSFQLIKQEYETL 127 (144)
Q Consensus 88 ~lGa~~L~~~~~~lE~~~~~~~~~~~~~~~~~l~~~~~~~ 127 (144)
.-|...|......++..+.+|+.+.....+..|..-...-
T Consensus 62 ~~g~d~L~~~ld~i~~la~~G~l~eAk~~l~~l~~~r~~Y 101 (106)
T d256ba_ 62 RHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAY 101 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 4567899999999999999999988877777766554443
No 12
>d1st6a3 a.24.9.1 (A:253-371) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=55.02 E-value=20 Score=22.00 Aligned_cols=62 Identities=13% Similarity=0.257 Sum_probs=45.1
Q ss_pred HHHHHHHHHhhhhhhhhhcHHHHHHHHHHHHHHHH---------cCChhhHHHHHHHHHHHHHHHHHHHHH
Q 032249 72 FSRLDDILHQFKGSCSSIGAKKVKDACSQFREYCN---------AGNAEGCSRSFQLIKQEYETLRRRLES 133 (144)
Q Consensus 72 ~~~l~~~aH~LKGss~~lGa~~L~~~~~~lE~~~~---------~~~~~~~~~~~~~l~~~~~~~~~~L~~ 133 (144)
...+-..++++-..+.---...+..+|.+|+..+. .|+++....+-.+|...+..++..++.
T Consensus 47 iR~il~earkva~~~~~~~r~~Il~~c~ei~~lt~qLadLr~~G~G~sPeA~~lA~qi~~kL~~L~~~v~~ 117 (119)
T d1st6a3 47 IRQILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQGLDLLTAKVEN 117 (119)
T ss_dssp HHHHHHHHHHHHHTTCSTTHHHHHHHHHHHHHHHHHHHHHTTTTCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34566667777777665556788888888887654 266778888888888888887776653
No 13
>d1wa8a1 a.25.3.1 (A:1-99) ESAT-6 like protein EsxB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=51.85 E-value=18 Score=20.60 Aligned_cols=72 Identities=11% Similarity=0.156 Sum_probs=47.0
Q ss_pred CCHHHHHHHHHhhhhhhhhhcHHHHHHHHHHHHHHHHc--CC-hhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHhh
Q 032249 70 VDFSRLDDILHQFKGSCSSIGAKKVKDACSQFREYCNA--GN-AEGCSRSFQLIKQEYETLRRRLESYFQMVKQAK 142 (144)
Q Consensus 70 ~D~~~l~~~aH~LKGss~~lGa~~L~~~~~~lE~~~~~--~~-~~~~~~~~~~l~~~~~~~~~~L~~~l~~~~~~~ 142 (144)
.|+..+.+.+..++..++.+- ..|..+...++..... |. ...+...+......+.++...|..+-...+.+.
T Consensus 5 vd~~~l~~~A~~~~~~~~~l~-~~l~~l~~~v~~l~~~W~G~A~~af~~~~~~w~~~~~~l~~~L~~i~~~L~~aa 79 (99)
T d1wa8a1 5 TDAATLAQEAGNFERISGDLK-TQIDQVESTAGSLQGQWRGAAGTAAQAAVVRFQEAANKQKQELDEISTNIRQAG 79 (99)
T ss_dssp SCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHTSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 477888888888888887764 2345555555554432 32 235667777777777778888877766665543
No 14
>d1wjta_ a.48.3.1 (A:) Transcription elongation factor S-II protein 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=48.95 E-value=9.8 Score=22.67 Aligned_cols=31 Identities=6% Similarity=0.199 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHcCChhhHHHHHHHHH
Q 032249 91 AKKVKDACSQFREYCNAGNAEGCSRSFQLIK 121 (144)
Q Consensus 91 a~~L~~~~~~lE~~~~~~~~~~~~~~~~~l~ 121 (144)
-..+..+...|+.+...++.+.+-..+..|.
T Consensus 11 eeei~~i~k~L~~~~~~~~~~~vl~~L~~L~ 41 (103)
T d1wjta_ 11 EEELLRIAKKLEKMVSRKKTEGALDLLKKLN 41 (103)
T ss_dssp HHHHHHHHHHHHHHHHTTCCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHH
Confidence 5777788888887777766665555555543
No 15
>d1h2vc1 a.118.1.14 (C:29-290) CBP80, 80KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.75 E-value=39 Score=23.03 Aligned_cols=105 Identities=15% Similarity=0.214 Sum_probs=71.7
Q ss_pred HHHHHHHHccccCCChHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCHHHHHHHHHhhhhh--hhhhcHHHHHHHHHHHH
Q 032249 25 SEQLIQLEDLQDDANPNFVEEVVSLFYSDSARLIQNIEQTLSNRPVDFSRLDDILHQFKGS--CSSIGAKKVKDACSQFR 102 (144)
Q Consensus 25 ~~~l~~L~~l~~~~~~~~~~~ll~~Fl~~~~~~l~~L~~a~~~~~~D~~~l~~~aH~LKGs--s~~lGa~~L~~~~~~lE 102 (144)
..+...|..+....++++...++..++.. ++.++. .+||..++.++|.|-.- ++.+....+..+...+=
T Consensus 55 ~~~yA~Lv~llN~~~~e~g~~~l~~~~~~-------f~~~l~--~~~~~~~~~llrFla~L~n~~Vv~~~~i~~ll~~ll 125 (262)
T d1h2vc1 55 LTIYTTLVGLLNARNYNFGGEFVEAMIRQ-------LKESLK--ANNYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFV 125 (262)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------HHHHHH--TTCHHHHHHHHHHHHHHHHTTSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCcHHHHHHHHHHHHHH-------HHHHHH--hCCHHHHHHHHHHHHHHccCCCCcHhHHHHHHHHHH
Confidence 34566666666667788877666665554 555665 37999999999999988 78899999999888887
Q ss_pred HHHHcCChhh-----------------HHHHHHHHHHHHHHHHHHHHHHHHhH
Q 032249 103 EYCNAGNAEG-----------------CSRSFQLIKQEYETLRRRLESYFQMV 138 (144)
Q Consensus 103 ~~~~~~~~~~-----------------~~~~~~~l~~~~~~~~~~L~~~l~~~ 138 (144)
..+...+... ...+.+.-..+++.+...++.|++..
T Consensus 126 ~~~~e~~~~~~~~d~~~~~vL~~LP~~g~~l~~~~~~~~~~ll~~i~~y~~~r 178 (262)
T d1h2vc1 126 SVTQEEDVPQVRRDWYVYAFLSSLPWVGKELYEKKDAEMDRIFANTESYLKRR 178 (262)
T ss_dssp HGGGCSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHhhccCCchhHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc
Confidence 6665543221 12333445556777777777777543
No 16
>d2f4mb1 a.189.1.1 (B:275-332) XPC-binding domain of Rad23 homolog B (Hhr23b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.77 E-value=11 Score=20.21 Aligned_cols=39 Identities=21% Similarity=0.430 Sum_probs=31.6
Q ss_pred CHHHHHHHHccccCCChHHHHHHHHHHHHhHHHHHHHHHH
Q 032249 24 DSEQLIQLEDLQDDANPNFVEEVVSLFYSDSARLIQNIEQ 63 (144)
Q Consensus 24 D~~~l~~L~~l~~~~~~~~~~~ll~~Fl~~~~~~l~~L~~ 63 (144)
+...|..++++.- .+|+++..++...-.+.+..+..|.+
T Consensus 7 ~~PqFq~lR~~vq-~nP~~L~~lLqql~~~NP~L~q~I~~ 45 (58)
T d2f4mb1 7 NQPQFQQMRQIIQ-QNPSLLPALLQQIGRENPQLLQQISQ 45 (58)
T ss_dssp TCHHHHHHHHHHH-HCGGGHHHHHHHHHHHCHHHHHHHHH
T ss_pred cChHHHHHHHHHH-HCHHHHHHHHHHHHhhCHHHHHHHHH
Confidence 3457889999886 68999999998888888887777764
No 17
>d2di0a1 a.5.2.4 (A:8-70) Activating signal cointegrator 1 complex subunit 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.24 E-value=14 Score=20.05 Aligned_cols=37 Identities=24% Similarity=0.397 Sum_probs=30.8
Q ss_pred HHHHHHHccccCCChHHHHHHHHHHHHhHHHHHHHHH
Q 032249 26 EQLIQLEDLQDDANPNFVEEVVSLFYSDSARLIQNIE 62 (144)
Q Consensus 26 ~~l~~L~~l~~~~~~~~~~~ll~~Fl~~~~~~l~~L~ 62 (144)
+.+.+++.+..+-+..|+...++.|-.+.++-+..|-
T Consensus 8 s~I~qV~Dl~PdLG~GFi~~~L~~Y~~n~E~vI~~lL 44 (63)
T d2di0a1 8 SLISQVKDLLPDLGEGFILACLEYYHYDPEQVINNIL 44 (63)
T ss_dssp HHHHHHHHHCCSSCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcHHHHHHHHHHhCCCHHHHHHHHH
Confidence 4567888899888999999999999888888777664
No 18
>d1s35a1 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.23 E-value=27 Score=19.59 Aligned_cols=72 Identities=14% Similarity=0.164 Sum_probs=46.9
Q ss_pred CCCHHHHHHHHHhhhhhhhhhcH--HHHHHHHHHHHHHHHc-CC--hhhHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 032249 69 PVDFSRLDDILHQFKGSCSSIGA--KKVKDACSQFREYCNA-GN--AEGCSRSFQLIKQEYETLRRRLESYFQMVKQ 140 (144)
Q Consensus 69 ~~D~~~l~~~aH~LKGss~~lGa--~~L~~~~~~lE~~~~~-~~--~~~~~~~~~~l~~~~~~~~~~L~~~l~~~~~ 140 (144)
..|.+.+.....+.+.--..+.. ..+..+...-+..... +. ...+...+..|...|..+...+...-....+
T Consensus 28 ~~d~~~~~~~l~~h~~l~~ei~~~~~~~~~~~~~g~~L~~~~~~~~~~~I~~~l~~L~~~w~~L~~~~~~R~~~Le~ 104 (106)
T d1s35a1 28 PESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESGEKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQ 104 (106)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35888888888877777666664 3344444444443332 22 2457778888999999988888776665554
No 19
>d1st6a4 a.24.9.1 (A:372-488) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=37.39 E-value=40 Score=20.44 Aligned_cols=64 Identities=6% Similarity=0.109 Sum_probs=44.1
Q ss_pred HHHHHHHHhhhhhhh-hhcHHHHHHHHHHHHHHHH---------cCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 032249 73 SRLDDILHQFKGSCS-SIGAKKVKDACSQFREYCN---------AGNAEGCSRSFQLIKQEYETLRRRLESYFQ 136 (144)
Q Consensus 73 ~~l~~~aH~LKGss~-~lGa~~L~~~~~~lE~~~~---------~~~~~~~~~~~~~l~~~~~~~~~~L~~~l~ 136 (144)
..+-..++++-..+. --....+..+|.+|+..+. .|+.++...+-.+|...+..+...++.-+.
T Consensus 38 R~il~earkva~~~~~P~~r~~il~lc~ei~~lt~qLadLr~~GkG~sPeA~~lA~qi~~kL~~L~~~v~~Av~ 111 (117)
T d1st6a4 38 RGIMSEARKVAELCEEPKERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALAKQIATSLQNLQSKTNRAVA 111 (117)
T ss_dssp HHHHHHHHHHHHHSCSTTTHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556666666653 3466777778888877433 267788888888888888888887776543
No 20
>d2f1ka1 a.100.1.12 (A:166-279) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=36.89 E-value=38 Score=20.03 Aligned_cols=51 Identities=14% Similarity=0.222 Sum_probs=30.0
Q ss_pred HHHHHccccCCChHHHHHH-------HHHHHHhHHHHHHHHHHHhhCCCCCHHHHHHHHHh
Q 032249 28 LIQLEDLQDDANPNFVEEV-------VSLFYSDSARLIQNIEQTLSNRPVDFSRLDDILHQ 81 (144)
Q Consensus 28 l~~L~~l~~~~~~~~~~~l-------l~~Fl~~~~~~l~~L~~a~~~~~~D~~~l~~~aH~ 81 (144)
|.+.-.+.. ++|++...+ +...++.....+..++.+++ .+|++.+.....+
T Consensus 47 frD~tRiA~-s~p~mW~dI~~~N~~~i~~~l~~~~~~L~~l~~~l~--~~d~~~l~~~l~~ 104 (114)
T d2f1ka1 47 FRDTSRVGG-GNPELGTMMATYNQRALLKSLQDYRQHLDQLITLIS--NQQWPELHRLLQQ 104 (114)
T ss_dssp HHHHHTGGG-SCHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHH
T ss_pred HHHHHHHHc-cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCHHHHHHHHHH
Confidence 334444443 566666654 33455555666677777776 3688777665543
No 21
>d1fpoa2 a.23.1.1 (A:77-171) HSC20 (HSCB), C-terminal oligomerisation domain {Escherichia coli [TaxId: 562]}
Probab=35.32 E-value=36 Score=19.38 Aligned_cols=75 Identities=13% Similarity=0.225 Sum_probs=49.8
Q ss_pred HHHHhHHHHHHHHHHHhhCCCCCHHHHHHHHHhhhhhhhhhcHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHH
Q 032249 49 LFYSDSARLIQNIEQTLSNRPVDFSRLDDILHQFKGSCSSIGAKKVKDACSQFREYCNAGNAEGCSRSFQLIKQEYETLR 128 (144)
Q Consensus 49 ~Fl~~~~~~l~~L~~a~~~~~~D~~~l~~~aH~LKGss~~lGa~~L~~~~~~lE~~~~~~~~~~~~~~~~~l~~~~~~~~ 128 (144)
.|+-+.-+.-+.|..+-. .+|...+..+...+++. +..+...+..+...++++.+...+..++= |.++.
T Consensus 14 eFLMeqME~RE~lee~~~--~~d~~~l~~l~~ei~~~--------~~~~~~~l~~~~~~~d~~~A~~~~~kLkF-~~kl~ 82 (95)
T d1fpoa2 14 AFLMEQLELREELDEIEQ--AKDEARLESFIKRVKKM--------FDTRHQLMVEQLDNETWDAAADTCRKLRF-LDKLR 82 (95)
T ss_dssp HHHHHHHHHHHHHHHHHH--HTCHHHHHHHHHHHHHH--------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHHHhhc--CCCHHHHHHHHHHHHHH--------HHHHHHHHHHHHhhccHHHHHHHHHHhHH-HHHHH
Confidence 456666666667777765 36888888888887754 45566677777778888777666666532 44444
Q ss_pred HHHHHH
Q 032249 129 RRLESY 134 (144)
Q Consensus 129 ~~L~~~ 134 (144)
..++++
T Consensus 83 ~ei~~~ 88 (95)
T d1fpoa2 83 SSAEQL 88 (95)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 445443
No 22
>d1st6a5 a.24.9.1 (A:489-646) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=34.35 E-value=52 Score=20.92 Aligned_cols=61 Identities=8% Similarity=0.145 Sum_probs=37.3
Q ss_pred HHHHHHhhhhhhhhhcHHHHHHHHHHHHHHHHc---------CChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 032249 75 LDDILHQFKGSCSSIGAKKVKDACSQFREYCNA---------GNAEGCSRSFQLIKQEYETLRRRLESYF 135 (144)
Q Consensus 75 l~~~aH~LKGss~~lGa~~L~~~~~~lE~~~~~---------~~~~~~~~~~~~l~~~~~~~~~~L~~~l 135 (144)
+...+.+|-..+.----..+...|.+|++...+ |+.+....+-.+|...+..+...+++-+
T Consensus 34 iv~earrvA~~~~~~~r~~Il~~C~el~~l~~~LadLr~~G~G~sPeA~~lA~qi~~kL~dL~~~v~~Av 103 (158)
T d1st6a5 34 LVAEGRRLANVMMGPYRQDLLAKCDRVDQLAAQLADLAARGEGESPQARAIAAQLQDSLKDLKARMQEAM 103 (158)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHSSTTSSCCSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444443333333457788889998887762 5666666666667666666666665543
No 23
>d1fi4a2 d.58.26.2 (A:191-393) Mevalonate 5-diphosphate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=28.89 E-value=48 Score=22.00 Aligned_cols=32 Identities=6% Similarity=0.123 Sum_probs=25.2
Q ss_pred HHHHHHHh-HHHHHHHHHHHhhCCCCCHHHHHHHH
Q 032249 46 VVSLFYSD-SARLIQNIEQTLSNRPVDFSRLDDIL 79 (144)
Q Consensus 46 ll~~Fl~~-~~~~l~~L~~a~~~~~~D~~~l~~~a 79 (144)
++...++. .+.++..+.+|+. .+||..+.+++
T Consensus 31 l~~~r~~~~~p~r~~~m~~AI~--~rDF~~f~eit 63 (203)
T d1fi4a2 31 LFKERIEHVVPKRFEVMRKAIV--EKDFATFAKET 63 (203)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHH--TTCHHHHHHHH
T ss_pred hHHHHHHHHhHHHHHHHHHHHH--hCCHHHHHHHH
Confidence 45666675 5789999999997 48999888765
Done!