Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>032252
MGFRFRNINSMCRTYITRVSSQSNNYYHPIIQCQSLNFQFQNHPSSVCSNQHYLKIPIRW
HLGHSHDHHQQLSGKDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVL
SSIALWSYKAAKAPKDKEHPYGHF

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032252
        (144 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2043328 - symbol:AT2G47830 species:3702 "Arabi...   267  1.2e-22   1
TIGR_CMR|BA_4640 - symbol:BA_4640 "cation efflux family p...   108  1.2e-05   1


>TAIR|locus:2043328 [details] [associations]
            symbol:AT2G47830 species:3702 "Arabidopsis thaliana"
            [GO:0006812 "cation transport" evidence=IEA;ISS] [GO:0008324
            "cation transmembrane transporter activity" evidence=IEA;ISS]
            [GO:0015562 "efflux transmembrane transporter activity"
            evidence=ISS] [GO:0016020 "membrane" evidence=ISS] [GO:0016021
            "integral to membrane" evidence=IEA] [GO:0055085 "transmembrane
            transport" evidence=IEA] InterPro:IPR002524 Pfam:PF01545
            GO:GO:0016021 GO:GO:0005774 EMBL:CP002685 GenomeReviews:CT485783_GR
            EMBL:AC005309 PANTHER:PTHR11562 TIGRFAMs:TIGR01297 GO:GO:0008324
            eggNOG:COG0053 EMBL:AY139998 EMBL:BT006611 IPI:IPI00537601
            IPI:IPI00542773 PIR:A84920 RefSeq:NP_182304.2 RefSeq:NP_850480.1
            UniGene:At.43449 ProteinModelPortal:Q8L725 SMR:Q8L725
            EnsemblPlants:AT2G47830.1 GeneID:819395 KEGG:ath:AT2G47830
            GeneFarm:5024 TAIR:At2g47830 HOGENOM:HOG000030754 InParanoid:Q8L725
            OMA:EVFIHID PhylomeDB:Q8L725 ProtClustDB:CLSN2680304
            Genevestigator:Q8L725 GermOnline:AT2G47830 Uniprot:Q8L725
        Length = 471

 Score = 267 (99.0 bits), Expect = 1.2e-22, P = 1.2e-22
 Identities = 63/143 (44%), Positives = 77/143 (53%)

Query:     3 FRFRNINSMCRTYITRVSSQSNNYYHPIIQCQSLNFQFQNHPSSVCSNQHYLKIPIRWHL 62
             F+  N   +CR+ I  +S +    Y P     S   +     SS  S +       RWH 
Sbjct:     6 FQILNPTRICRSTIYYMSCR----YLPSSSSSSSPLRV----SSSSSQKPSFDFSRRWHF 57

Query:    63 GHSHDHHQQLS--GKDAENIFRLGLASDVGLAAGKALTGYLSGSTXXXXXXXXXXXXVVL 120
             GH  DHHQQ    G++ E IFRLGL +D+GL+  KALTGYL GST            VVL
Sbjct:    58 GHP-DHHQQYQKPGEEGEKIFRLGLTADIGLSVAKALTGYLCGSTAIIADAAHSVSDVVL 116

Query:   121 SSIALWSYKAAKAPKDKEHPYGH 143
             S +AL SY+AA  PKDKEHPYGH
Sbjct:   117 SGVALVSYRAANVPKDKEHPYGH 139


>TIGR_CMR|BA_4640 [details] [associations]
            symbol:BA_4640 "cation efflux family protein"
            species:198094 "Bacillus anthracis str. Ames" [GO:0006812 "cation
            transport" evidence=ISS] [GO:0008324 "cation transmembrane
            transporter activity" evidence=ISS] [GO:0015562 "efflux
            transmembrane transporter activity" evidence=ISS]
            InterPro:IPR002524 Pfam:PF01545 GO:GO:0016021 EMBL:AE016879
            EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
            PANTHER:PTHR11562 TIGRFAMs:TIGR01297 GO:GO:0008324
            HOGENOM:HOG000062182 RefSeq:NP_846857.1 RefSeq:YP_021287.1
            RefSeq:YP_030552.1 DNASU:1085522 EnsemblBacteria:EBBACT00000011259
            EnsemblBacteria:EBBACT00000014373 EnsemblBacteria:EBBACT00000020418
            GeneID:1085522 GeneID:2814861 GeneID:2849270 KEGG:ban:BA_4640
            KEGG:bar:GBAA_4640 KEGG:bat:BAS4305 OMA:GVHSISD
            ProtClustDB:CLSK872799 BioCyc:BANT260799:GJAJ-4360-MONOMER
            BioCyc:BANT261594:GJ7F-4510-MONOMER Uniprot:Q81LH9
        Length = 298

 Score = 108 (43.1 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 24/69 (34%), Positives = 35/69 (50%)

Query:    75 KDAENIFRLGLASDVGLAAGKALTGYLSGSTXXXXXXXXXXXXVVLSSIALWSYKAAKAP 134
             K AE    +G+  ++ LA  KA+ GY+  S             V+ S   L+  +AAK P
Sbjct:     9 KQAEFGAIVGIVGNIILAIIKAVIGYIGNSKALLADAVHSASDVIGSLAVLFGLRAAKQP 68

Query:   135 KDKEHPYGH 143
              D++HPYGH
Sbjct:    69 PDEDHPYGH 77


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.133   0.421    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      144       132   0.00091  102 3  11 22  0.38    31
                                                     30  0.43    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  156 KB (2093 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.30u 0.13s 12.43t   Elapsed:  00:00:00
  Total cpu time:  12.30u 0.13s 12.43t   Elapsed:  00:00:00
  Start:  Fri May 10 23:15:12 2013   End:  Fri May 10 23:15:12 2013

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