Your job contains 1 sequence.
>032257
MGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMG
TPALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRC
HDVEEYAKQFPTIGFEKETMKYKS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 032257
(144 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2005518 - symbol:SHM1 "serine transhydroxymeth... 603 9.3e-59 1
TAIR|locus:2148463 - symbol:SHM2 "serine hydroxymethyltra... 599 2.5e-58 1
UNIPROTKB|Q3SZ20 - symbol:SHMT2 "Serine hydroxymethyltran... 364 2.0e-33 1
UNIPROTKB|F1SL74 - symbol:LOC100626911 "Serine hydroxymet... 361 4.1e-33 1
UNIPROTKB|B4DLV4 - symbol:SHMT2 "Serine hydroxymethyltran... 347 1.3e-31 1
UNIPROTKB|B4DPM9 - symbol:SHMT1 "Serine hydroxymethyltran... 347 1.3e-31 1
UNIPROTKB|P34896 - symbol:SHMT1 "Serine hydroxymethyltran... 347 1.3e-31 1
UNIPROTKB|P34897 - symbol:SHMT2 "Serine hydroxymethyltran... 347 1.3e-31 1
UNIPROTKB|Q4KLG7 - symbol:Shmt1 "Serine hydroxymethyltran... 345 2.0e-31 1
UNIPROTKB|Q60V73 - symbol:mel-32 "Serine hydroxymethyltra... 343 4.6e-31 1
UNIPROTKB|G4MRB4 - symbol:MGG_13781 "Serine hydroxymethyl... 341 8.6e-31 1
RGD|1312011 - symbol:Shmt1 "serine hydroxymethyltransfera... 345 1.3e-30 1
WB|WBGene00003214 - symbol:mel-32 species:6239 "Caenorhab... 338 1.6e-30 1
UNIPROTKB|P50432 - symbol:mel-32 "Serine hydroxymethyltra... 338 1.6e-30 1
MGI|MGI:98299 - symbol:Shmt1 "serine hydroxymethyltransfe... 336 1.8e-30 1
POMBASE|SPAC18G6.04c - symbol:shm2 "serine hydroxymethylt... 334 3.1e-30 1
RGD|1308582 - symbol:Shmt2 "serine hydroxymethyltransfera... 335 3.4e-30 1
UNIPROTKB|Q5E9P9 - symbol:SHMT1 "Serine hydroxymethyltran... 333 3.8e-30 1
UNIPROTKB|P14519 - symbol:SHMT2 "Serine hydroxymethyltran... 333 5.9e-30 1
UNIPROTKB|E1BS67 - symbol:SHMT1 "Uncharacterized protein"... 331 6.9e-30 1
POMBASE|SPAC24C9.12c - symbol:SPAC24C9.12c "glycine hydro... 312 1.2e-29 2
CGD|CAL0003822 - symbol:SHM1 species:5476 "Candida albica... 327 2.4e-29 1
UNIPROTKB|Q59PP7 - symbol:SHM1 "Putative uncharacterized ... 327 2.4e-29 1
ZFIN|ZDB-GENE-071213-1 - symbol:shmt2 "serine hydroxymeth... 325 4.1e-29 1
ASPGD|ASPL0000008876 - symbol:AN10745 species:162425 "Eme... 328 6.0e-29 1
TAIR|locus:2127806 - symbol:SHM3 "serine hydroxymethyltra... 325 7.1e-29 1
SGD|S000000467 - symbol:SHM1 "Mitochondrial serine hydrox... 322 8.9e-29 1
UNIPROTKB|E2RIV3 - symbol:SHMT1 "Uncharacterized protein"... 317 3.1e-28 1
CGD|CAL0001464 - symbol:SHM2 species:5476 "Candida albica... 310 1.5e-27 1
UNIPROTKB|O13426 - symbol:SHM2 "Serine hydroxymethyltrans... 310 1.5e-27 1
UNIPROTKB|E2R4L7 - symbol:SHMT2 "Uncharacterized protein"... 313 1.6e-27 1
UNIPROTKB|H0YIZ0 - symbol:SHMT2 "Serine hydroxymethyltran... 306 2.8e-27 1
TAIR|locus:2129251 - symbol:SHM4 "serine hydroxymethyltra... 292 5.3e-27 2
ZFIN|ZDB-GENE-040426-1558 - symbol:shmt1 "serine hydroxym... 307 5.7e-27 1
ASPGD|ASPL0000040474 - symbol:AN3058 species:162425 "Emer... 303 1.0e-26 1
DICTYBASE|DDB_G0291652 - symbol:shmt2 "serine hydroxymeth... 289 1.5e-26 2
FB|FBgn0029823 - symbol:CG3011 species:7227 "Drosophila m... 299 6.0e-26 1
SGD|S000004048 - symbol:SHM2 "Cytosolic serine hydroxymet... 296 6.4e-26 1
TAIR|locus:2119545 - symbol:EDA36 "EMBRYO SAC DEVELOPMENT... 282 7.9e-26 2
UNIPROTKB|G4NDG3 - symbol:MGG_00923 "Serine hydroxymethyl... 293 1.7e-25 1
DICTYBASE|DDB_G0277947 - symbol:shmt1 "serine hydroxymeth... 269 2.0e-24 2
GENEDB_PFALCIPARUM|PFL1720w - symbol:PFL1720w "Serine hyd... 233 5.7e-19 1
UNIPROTKB|Q8I566 - symbol:PFL1720w "Serine hydroxymethylt... 233 5.7e-19 1
TAIR|locus:2035937 - symbol:SHM7 "serine hydroxymethyltra... 230 2.7e-18 1
UNIPROTKB|A8MYA6 - symbol:SHMT1 "Serine hydroxymethyltran... 169 2.2e-16 2
TIGR_CMR|CBU_1419 - symbol:CBU_1419 "serine hydroxymethyl... 208 2.8e-16 1
UNIPROTKB|O53441 - symbol:glyA1 "Serine hydroxymethyltran... 186 7.5e-16 2
TAIR|locus:2030581 - symbol:SHM6 "serine hydroxymethyltra... 197 9.8e-15 1
UNIPROTKB|Q9KTG1 - symbol:glyA1 "Serine hydroxymethyltran... 193 1.2e-14 1
TIGR_CMR|VC_0941 - symbol:VC_0941 "serine hydroxymethyltr... 193 1.2e-14 1
TIGR_CMR|CHY_2557 - symbol:CHY_2557 "serine hydroxymethyl... 192 1.6e-14 1
UNIPROTKB|Q9KMP4 - symbol:glyA2 "Serine hydroxymethyltran... 192 1.7e-14 1
TIGR_CMR|VC_A0278 - symbol:VC_A0278 "serine hydroxymethyl... 192 1.7e-14 1
TIGR_CMR|CPS_2477 - symbol:CPS_2477 "serine hydroxymethyl... 191 2.0e-14 1
TIGR_CMR|CPS_4031 - symbol:CPS_4031 "serine hydroxymethyl... 191 2.0e-14 1
TIGR_CMR|BA_5558 - symbol:BA_5558 "serine hydroxymethyltr... 189 3.2e-14 1
UNIPROTKB|P0A825 - symbol:glyA species:83333 "Escherichia... 188 4.3e-14 1
TIGR_CMR|CPS_0728 - symbol:CPS_0728 "serine hydroxymethyl... 186 7.2e-14 1
UNIPROTKB|O53615 - symbol:glyA2 "Serine hydroxymethyltran... 185 9.6e-14 1
TIGR_CMR|GSU_1607 - symbol:GSU_1607 "serine hydroxymethyl... 182 1.9e-13 1
TIGR_CMR|SPO_1572 - symbol:SPO_1572 "serine hydroxymethyl... 182 2.1e-13 1
TIGR_CMR|SPO_2940 - symbol:SPO_2940 "serine hydroxymethyl... 182 2.1e-13 1
TIGR_CMR|SO_3471 - symbol:SO_3471 "serine hydroxymethyltr... 181 2.5e-13 1
TIGR_CMR|CJE_0451 - symbol:CJE_0451 "serine hydroxymethyl... 178 5.2e-13 1
TIGR_CMR|APH_0154 - symbol:APH_0154 "serine hydroxymethyl... 175 1.2e-12 1
TIGR_CMR|CPS_3844 - symbol:CPS_3844 "serine hydroxymethyl... 175 1.2e-12 1
TIGR_CMR|DET_0436 - symbol:DET_0436 "Serine hydroxymethyl... 172 2.4e-12 1
TIGR_CMR|ECH_0311 - symbol:ECH_0311 "serine hydroxymethyl... 152 3.7e-10 1
TIGR_CMR|NSE_0218 - symbol:NSE_0218 "serine hydroxymethyl... 150 6.1e-10 1
UNIPROTKB|G3V2Y4 - symbol:SHMT2 "Serine hydroxymethyltran... 110 4.1e-06 1
>TAIR|locus:2005518 [details] [associations]
symbol:SHM1 "serine transhydroxymethyltransferase 1"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS;TAS]
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0006544 "glycine
metabolic process" evidence=IEA;ISS] [GO:0006563 "L-serine
metabolic process" evidence=IEA;ISS] [GO:0019464 "glycine
decarboxylation via glycine cleavage system" evidence=IMP]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009626
"plant-type hypersensitive response" evidence=TAS] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0046686 "response to cadmium
ion" evidence=IEP] [GO:0009409 "response to cold" evidence=IEP;RCA]
[GO:0010319 "stromule" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009853 "photorespiration" evidence=IMP]
[GO:0016020 "membrane" evidence=IDA] [GO:0008266 "poly(U) RNA
binding" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009534
"chloroplast thylakoid" evidence=IDA] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0009697 "salicylic acid biosynthetic
process" evidence=RCA] [GO:0009814 "defense response, incompatible
interaction" evidence=RCA] [GO:0019684 "photosynthesis, light
reaction" evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005886
GO:GO:0005634 GO:GO:0046686 GO:GO:0009570 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161592 GO:GO:0008266 GO:GO:0005759 GO:GO:0048046
GO:GO:0009409 GO:GO:0009626 EMBL:AL035538 GO:GO:0009853
GO:GO:0009534 GO:GO:0022626 GO:GO:0010319 GO:GO:0006544
GO:GO:0035999 eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 OMA:GKIDYED HOGENOM:HOG000239405 EMBL:AJ271726
EMBL:AY054254 EMBL:AY057645 EMBL:AY070726 EMBL:AF428388
EMBL:BT006353 IPI:IPI00525727 PIR:T05620 RefSeq:NP_195506.1
UniGene:At.21766 ProteinModelPortal:Q9SZJ5 SMR:Q9SZJ5 IntAct:Q9SZJ5
STRING:Q9SZJ5 PaxDb:Q9SZJ5 PRIDE:Q9SZJ5 ProMEX:Q9SZJ5
EnsemblPlants:AT4G37930.1 GeneID:829949 KEGG:ath:AT4G37930
TAIR:At4g37930 InParanoid:Q9SZJ5 PhylomeDB:Q9SZJ5
ProtClustDB:PLN03226 BioCyc:MetaCyc:AT4G37930-MONOMER
Genevestigator:Q9SZJ5 GermOnline:AT4G37930 Uniprot:Q9SZJ5
Length = 517
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 119/144 (82%), Positives = 132/144 (91%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT 61
GYELVSGGT+NHLVLVNLK KGIDGSRVEKVLEAVHIA+NKNTVPGDVSAMVPGGIRMGT
Sbjct: 374 GYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHIASNKNTVPGDVSAMVPGGIRMGT 433
Query: 62 PALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVATTQSAN-FQSEIAKRC 120
PALTSRGFVEEDFAKVA +FD AV + +K+KSE QGTKLKDFV+ +S++ QSEIAK
Sbjct: 434 PALTSRGFVEEDFAKVAEYFDKAVTIALKVKSEAQGTKLKDFVSAMESSSTIQSEIAKLR 493
Query: 121 HDVEEYAKQFPTIGFEKETMKYKS 144
H+VEE+AKQFPTIGFEKETMKYK+
Sbjct: 494 HEVEEFAKQFPTIGFEKETMKYKN 517
>TAIR|locus:2148463 [details] [associations]
symbol:SHM2 "serine hydroxymethyltransferase 2"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006544 "glycine metabolic
process" evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0050897 "cobalt ion binding" evidence=IDA] [GO:0005747
"mitochondrial respiratory chain complex I" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009744 "response to
sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005829
EMBL:CP002688 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0008270 GO:GO:0050897
GO:GO:0005747 GO:GO:0008168 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 OMA:ERFRAIC HSSP:P07511
ProtClustDB:PLN03226 EMBL:BT001097 EMBL:BT001113 IPI:IPI00525834
RefSeq:NP_568488.2 RefSeq:NP_851081.1 UniGene:At.22652
ProteinModelPortal:Q8GRI1 STRING:Q8GRI1 PaxDb:Q8GRI1 PRIDE:Q8GRI1
EnsemblPlants:AT5G26780.2 EnsemblPlants:AT5G26780.3 GeneID:832736
KEGG:ath:AT5G26780 TAIR:At5g26780 InParanoid:Q8GRI1
PhylomeDB:Q8GRI1 Genevestigator:Q8GRI1 Uniprot:Q8GRI1
Length = 533
Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 119/143 (83%), Positives = 130/143 (90%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT 61
GY+LVSGGT+NHLVLVNLKNKGIDGSRVEKVLE VHIAANKNTVPGDVSAMVPGGIRMGT
Sbjct: 390 GYDLVSGGTDNHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMVPGGIRMGT 449
Query: 62 PALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVATTQS-ANFQSEIAKRC 120
PALTSRGF+EEDFAKVA +FD AVK+ +KIK+E+QGTKLKDFVAT QS QSE++K
Sbjct: 450 PALTSRGFIEEDFAKVAEYFDLAVKIALKIKAESQGTKLKDFVATMQSNEKLQSEMSKLR 509
Query: 121 HDVEEYAKQFPTIGFEKETMKYK 143
VEEYAKQFPTIGFEKETM+YK
Sbjct: 510 EMVEEYAKQFPTIGFEKETMRYK 532
>UNIPROTKB|Q3SZ20 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9913 "Bos taurus" [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0005759 "mitochondrial matrix"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0015630
"microtubule cytoskeleton" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0015630 GO:GO:0005743 GO:GO:0003682
GO:GO:0042645 GO:GO:0008168 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 OMA:GKIDYED HOGENOM:HOG000239405
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 EMBL:BC103242
IPI:IPI00718654 RefSeq:NP_001029454.1 UniGene:Bt.49106
ProteinModelPortal:Q3SZ20 SMR:Q3SZ20 STRING:Q3SZ20 PRIDE:Q3SZ20
Ensembl:ENSBTAT00000038244 GeneID:507197 KEGG:bta:507197 CTD:6472
InParanoid:Q3SZ20 OrthoDB:EOG4G4GQ7 NextBio:20867950 Uniprot:Q3SZ20
Length = 504
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 73/136 (53%), Positives = 98/136 (72%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT 61
GY LVSGGT+NHLVLV+L+ KG+DG+R E+VLE V I ANKNT PGD SA+ PGG+R+G
Sbjct: 369 GYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGA 428
Query: 62 PALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVA-TTQSANFQSEIAKRC 120
PALTSRGF+E+DF KV F D V + +++KS+T TKL+DF + + ++A
Sbjct: 429 PALTSRGFLEDDFRKVVGFIDEGVNIGLEVKSKT--TKLQDFKSFLLKDPETSHQLADLR 486
Query: 121 HDVEEYAKQFPTIGFE 136
VE++A+ FP GF+
Sbjct: 487 QRVEQFARAFPMPGFD 502
>UNIPROTKB|F1SL74 [details] [associations]
symbol:LOC100626911 "Serine hydroxymethyltransferase"
species:9823 "Sus scrofa" [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0006544 "glycine metabolic
process" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 OMA:GKIDYED
GeneTree:ENSGT00390000002762 EMBL:CU633428 EMBL:FP340566
Ensembl:ENSSSCT00000023184 Ensembl:ENSSSCT00000023666
Uniprot:F1SL74
Length = 504
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 75/137 (54%), Positives = 98/137 (71%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT 61
GY LVSGGT+NHLVLV+L+ KG+DG+RVE+VLE V I ANKNT PGD SA+ PGG+R+GT
Sbjct: 369 GYSLVSGGTDNHLVLVDLRPKGLDGARVERVLELVSITANKNTCPGDRSAITPGGLRLGT 428
Query: 62 PALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVA-TTQSANFQSEIAKRC 120
PALTSR F E+DF KV F D V + +++KS+T TKL+DF + + +A
Sbjct: 429 PALTSRQFREDDFRKVVAFIDEGVSIGLEVKSKT--TKLQDFKSFLLKDPETCRRLADLR 486
Query: 121 HDVEEYAKQFPTIGFEK 137
VE++A+ FP GFE+
Sbjct: 487 QRVEQFARAFPMPGFEE 503
>UNIPROTKB|B4DLV4 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase" species:9606
"Homo sapiens" [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005739 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0015630 EMBL:CH471054 GO:GO:0008168
GO:GO:0006544 GO:GO:0035999 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HOVERGEN:HBG002807
EMBL:AC137834 UniGene:Hs.741179 HGNC:HGNC:10852 ChiTaRS:SHMT2
EMBL:AK297173 IPI:IPI00794549 SMR:B4DLV4 STRING:B4DLV4
Ensembl:ENST00000393827 UCSC:uc001snj.2 Uniprot:B4DLV4
Length = 408
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 70/137 (51%), Positives = 96/137 (70%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT 61
GY LVSGGT+NHLVLV+L+ KG+DG+R E+VLE V I ANKNT PGD SA+ PGG+R+G
Sbjct: 273 GYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGA 332
Query: 62 PALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVA-TTQSANFQSEIAKRC 120
PALTSR F E+DF +V F D V + +++KS+T KL+DF + + + +A
Sbjct: 333 PALTSRQFREDDFRRVVDFIDEGVNIGLEVKSKT--AKLQDFKSFLLKDSETSQRLANLR 390
Query: 121 HDVEEYAKQFPTIGFEK 137
VE++A+ FP GF++
Sbjct: 391 QRVEQFARAFPMPGFDE 407
>UNIPROTKB|B4DPM9 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase" species:9606
"Homo sapiens" [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008732 "L-allo-threonine
aldolase activity" evidence=IEA] [GO:0016597 "amino acid binding"
evidence=IEA] [GO:0019264 "glycine biosynthetic process from
serine" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051289 "protein homotetramerization"
evidence=IEA] [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005829
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0016597 GO:GO:0051289
GO:GO:0008168 GO:GO:0035999 EMBL:AC127537 GO:GO:0008732
GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264 HOVERGEN:HBG002807
UniGene:Hs.513987 UniGene:Hs.636044 HGNC:HGNC:10850 ChiTaRS:SHMT1
EMBL:AL353997 EMBL:AK298415 IPI:IPI01015924 SMR:B4DPM9
STRING:B4DPM9 Ensembl:ENST00000539052 Uniprot:B4DPM9
Length = 345
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 68/136 (50%), Positives = 97/136 (71%)
Query: 1 MGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMG 60
+GY++V+GG++NHL+LV+L++KG DG R EKVLEA IA NKNT PGD SA+ P G+R+G
Sbjct: 207 LGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLG 266
Query: 61 TPALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTK--LKDFVATTQSANFQSEIAK 118
TPALTSRG +E+DF KVA+F ++LT++I+S+T G + LK+F +Q+ +
Sbjct: 267 TPALTSRGLLEKDFQKVAHFIHRGIELTLQIQSDT-GVRATLKEFKERLAGDKYQAAVQA 325
Query: 119 RCHDVEEYAKQFPTIG 134
+VE +A FP G
Sbjct: 326 LREEVESFASLFPLPG 341
>UNIPROTKB|P34896 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008732 "L-allo-threonine aldolase activity"
evidence=IEA] [GO:0016597 "amino acid binding" evidence=IEA]
[GO:0019264 "glycine biosynthetic process from serine"
evidence=IEA] [GO:0051289 "protein homotetramerization"
evidence=IEA] [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0051262 "protein tetramerization" evidence=IDA]
[GO:0046655 "folic acid metabolic process" evidence=IDA;TAS]
[GO:0030170 "pyridoxal phosphate binding" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA;TAS] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IDA;TAS] [GO:0006565
"L-serine catabolic process" evidence=IDA] [GO:0009113 "purine
nucleobase biosynthetic process" evidence=IDA] [GO:0006766 "vitamin
metabolic process" evidence=TAS] [GO:0006767 "water-soluble vitamin
metabolic process" evidence=TAS] [GO:0034641 "cellular nitrogen
compound metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] [GO:0045329 "carnitine
biosynthetic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
UniPathway:UPA00193 Reactome:REACT_111217 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 EMBL:L11931
GO:GO:0005829 GO:GO:0005739 GO:GO:0005634 GO:GO:0042803
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0051262 DrugBank:DB00114
GO:GO:0016597 GO:GO:0051289 GO:GO:0045329 DrugBank:DB00145
DrugBank:DB00116 EMBL:CH471196 GO:GO:0009113 GO:GO:0035999
GO:GO:0046655 GO:GO:0006565 DrugBank:DB01055 GO:GO:0008732
eggNOG:COG0112 KO:K00600 GO:GO:0004372 PANTHER:PTHR11680
HOGENOM:HOG000239405 GO:GO:0019264 CTD:6470 HOVERGEN:HBG002807
OrthoDB:EOG42Z4Q2 EMBL:L23928 EMBL:Y14485 EMBL:Y14486 EMBL:Y14487
EMBL:BC007979 EMBL:BC022874 EMBL:BC038598 IPI:IPI00002519
IPI:IPI00220668 IPI:IPI00220669 PIR:A46746 RefSeq:NP_004160.3
RefSeq:NP_683718.1 UniGene:Hs.513987 UniGene:Hs.636044 PDB:1BJ4
PDBsum:1BJ4 ProteinModelPortal:P34896 SMR:P34896 IntAct:P34896
STRING:P34896 PhosphoSite:P34896 DMDM:462184 PaxDb:P34896
PRIDE:P34896 DNASU:6470 Ensembl:ENST00000316694
Ensembl:ENST00000352886 Ensembl:ENST00000354098 GeneID:6470
KEGG:hsa:6470 UCSC:uc002gsz.3 UCSC:uc002gtb.3 GeneCards:GC17M018231
HGNC:HGNC:10850 HPA:HPA023314 MIM:182144 neXtProt:NX_P34896
PharmGKB:PA35753 InParanoid:P34896 OMA:VDLRESH BindingDB:P34896
ChEMBL:CHEMBL1772927 ChiTaRS:SHMT1 EvolutionaryTrace:P34896
GenomeRNAi:6470 NextBio:25133 ArrayExpress:P34896 Bgee:P34896
CleanEx:HS_SHMT1 Genevestigator:P34896 GermOnline:ENSG00000176974
Uniprot:P34896
Length = 483
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 68/136 (50%), Positives = 97/136 (71%)
Query: 1 MGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMG 60
+GY++V+GG++NHL+LV+L++KG DG R EKVLEA IA NKNT PGD SA+ P G+R+G
Sbjct: 345 LGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLG 404
Query: 61 TPALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTK--LKDFVATTQSANFQSEIAK 118
TPALTSRG +E+DF KVA+F ++LT++I+S+T G + LK+F +Q+ +
Sbjct: 405 TPALTSRGLLEKDFQKVAHFIHRGIELTLQIQSDT-GVRATLKEFKERLAGDKYQAAVQA 463
Query: 119 RCHDVEEYAKQFPTIG 134
+VE +A FP G
Sbjct: 464 LREEVESFASLFPLPG 479
>UNIPROTKB|P34897 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0005758 "mitochondrial intermembrane
space" evidence=IEA] [GO:0006564 "L-serine biosynthetic process"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008732 "L-allo-threonine aldolase
activity" evidence=IEA] [GO:0016597 "amino acid binding"
evidence=IEA] [GO:0019264 "glycine biosynthetic process from
serine" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051289 "protein homotetramerization"
evidence=IEA] [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=IDA]
[GO:0006730 "one-carbon metabolic process" evidence=IDA]
[GO:0005759 "mitochondrial matrix" evidence=IDA] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0042645 "mitochondrial nucleoid"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0008284
EMBL:CH471054 DrugBank:DB00114 GO:GO:0003682 GO:GO:0016597
GO:GO:0051289 GO:GO:0042645 DrugBank:DB00145 DrugBank:DB00116
GO:GO:0008168 GO:GO:0006730 GO:GO:0035999 GO:GO:0006564
GO:GO:0008732 eggNOG:COG0112 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 OMA:GKIDYED HOGENOM:HOG000239405 GO:GO:0019264
HOVERGEN:HBG002807 CTD:6472 EMBL:AK315916 EMBL:BT006866
EMBL:AC137834 EMBL:BC011911 EMBL:BC013677 EMBL:BC032584
EMBL:BC044211 EMBL:Y12331 EMBL:U23143 EMBL:L11932 IPI:IPI00002520
IPI:IPI00795816 PIR:B46746 RefSeq:NP_001159828.1
RefSeq:NP_001159829.1 RefSeq:NP_001159830.1 RefSeq:NP_001159831.1
RefSeq:NP_005403.2 UniGene:Hs.741179 PDB:3OU5 PDBsum:3OU5
ProteinModelPortal:P34897 SMR:P34897 IntAct:P34897 STRING:P34897
PhosphoSite:P34897 DMDM:6226865 PaxDb:P34897 PRIDE:P34897
DNASU:6472 Ensembl:ENST00000328923 Ensembl:ENST00000414700
Ensembl:ENST00000449049 Ensembl:ENST00000553474
Ensembl:ENST00000557487 GeneID:6472 KEGG:hsa:6472 UCSC:uc001snf.2
GeneCards:GC12P057623 HGNC:HGNC:10852 HPA:HPA020543 HPA:HPA020549
MIM:138450 neXtProt:NX_P34897 PharmGKB:PA35755 InParanoid:P34897
PhylomeDB:P34897 BioCyc:MetaCyc:HS00049-MONOMER ChiTaRS:SHMT2
EvolutionaryTrace:P34897 GenomeRNAi:6472 NextBio:25141
ArrayExpress:P34897 Bgee:P34897 CleanEx:HS_SHMT2
Genevestigator:P34897 GermOnline:ENSG00000182199 Uniprot:P34897
Length = 504
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 70/137 (51%), Positives = 96/137 (70%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT 61
GY LVSGGT+NHLVLV+L+ KG+DG+R E+VLE V I ANKNT PGD SA+ PGG+R+G
Sbjct: 369 GYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGA 428
Query: 62 PALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVA-TTQSANFQSEIAKRC 120
PALTSR F E+DF +V F D V + +++KS+T KL+DF + + + +A
Sbjct: 429 PALTSRQFREDDFRRVVDFIDEGVNIGLEVKSKT--AKLQDFKSFLLKDSETSQRLANLR 486
Query: 121 HDVEEYAKQFPTIGFEK 137
VE++A+ FP GF++
Sbjct: 487 QRVEQFARAFPMPGFDE 503
>UNIPROTKB|Q4KLG7 [details] [associations]
symbol:Shmt1 "Serine hydroxymethyltransferase"
species:10116 "Rattus norvegicus" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
RGD:1312011 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 HOVERGEN:HBG002807 EMBL:BC099219
IPI:IPI00627076 UniGene:Rn.3684 STRING:Q4KLG7
Ensembl:ENSRNOT00000057973 OMA:MTPEFKL Genevestigator:Q4KLG7
Uniprot:Q4KLG7
Length = 352
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 69/136 (50%), Positives = 94/136 (69%)
Query: 1 MGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMG 60
+GY++V+GG++NHL+L++L+ KG DG R EKVLEA IA NKNT PGD SA+ P G+R+G
Sbjct: 213 LGYKIVTGGSDNHLILMDLRPKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLG 272
Query: 61 TPALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSE-TQGTKLKDFVAT-TQSANFQSEIAK 118
TPALTSRG +EEDF K+A+F ++LT++I+S T LK+F T FQS +A
Sbjct: 273 TPALTSRGLLEEDFQKIAHFIHRGIELTLQIQSHMTMRATLKEFKEKLTGDEKFQSAVAA 332
Query: 119 RCHDVEEYAKQFPTIG 134
+VE +A F G
Sbjct: 333 LREEVENFASNFSLPG 348
>UNIPROTKB|Q60V73 [details] [associations]
symbol:mel-32 "Serine hydroxymethyltransferase"
species:6238 "Caenorhabditis briggsae" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=TAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0009069 "serine family amino
acid metabolic process" evidence=TAS] [GO:0030170 "pyridoxal
phosphate binding" evidence=TAS] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 EMBL:HE600934 HSSP:P07511
ProteinModelPortal:Q60V73 STRING:Q60V73 PRIDE:Q60V73
EnsemblMetazoa:CBG19673 WormBase:CBG19673 GO:GO:0009069
Uniprot:Q60V73
Length = 511
Score = 343 (125.8 bits), Expect = 4.6e-31, P = 4.6e-31
Identities = 69/134 (51%), Positives = 92/134 (68%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT 61
GY L +GGT+NHL+LV+L+ G++G+R E +L+ HIA NKNT PGDVSA+ PGGIR+GT
Sbjct: 375 GYSLATGGTDNHLLLVDLRPIGVEGARAEHILDLAHIACNKNTCPGDVSALRPGGIRLGT 434
Query: 62 PALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVA-TTQSANFQSEIAKRC 120
PALTSRGF E+DF KV F V++ K +E G LKDF A T + F+ E+A+
Sbjct: 435 PALTSRGFKEQDFEKVGDFIHEGVQIAKKYNAEA-GKTLKDFKAFTATNEQFKQEVAELA 493
Query: 121 HDVEEYAKQFPTIG 134
VEE++ +F G
Sbjct: 494 KRVEEFSGKFEIPG 507
>UNIPROTKB|G4MRB4 [details] [associations]
symbol:MGG_13781 "Serine hydroxymethyltransferase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0008168 EMBL:CM001231 GO:GO:0006544 GO:GO:0035999 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 RefSeq:XP_003710851.1
ProteinModelPortal:G4MRB4 SMR:G4MRB4 EnsemblFungi:MGG_13781T0
GeneID:5049001 KEGG:mgr:MGG_13781 Uniprot:G4MRB4
Length = 516
Score = 341 (125.1 bits), Expect = 8.6e-31, P = 8.6e-31
Identities = 71/141 (50%), Positives = 97/141 (68%)
Query: 1 MGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMG 60
+GY++VSGGT+NHLVL +LK +GIDG+RVE+VLE V IAANKNTVPGD SA+ PGG+RMG
Sbjct: 369 LGYKIVSGGTDNHLVLADLKPQGIDGARVERVLELVGIAANKNTVPGDKSALTPGGLRMG 428
Query: 61 TPALTSRGFVEEDFAKVAYFFDAAVKLTVKI----------KSETQGTKLKDFVATTQSA 110
TPA+T+RGF E+DF +VA D AV + V++ K E KLK+F+ +
Sbjct: 429 TPAMTTRGFGEDDFVRVADIVDRAVTIAVRVDKAARKAAEAKGEKSPGKLKNFLEYLGNG 488
Query: 111 NFQSEIAKRCHDVEEYAKQFP 131
+SEI + +V ++ +P
Sbjct: 489 ETESEIVQLRSEVSDWVGTYP 509
>RGD|1312011 [details] [associations]
symbol:Shmt1 "serine hydroxymethyltransferase 1 (soluble)"
species:10116 "Rattus norvegicus" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISO;IDA;TAS]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA;TAS] [GO:0006544 "glycine
metabolic process" evidence=IDA;TAS] [GO:0006545 "glycine
biosynthetic process" evidence=IDA] [GO:0006563 "L-serine metabolic
process" evidence=TAS] [GO:0006565 "L-serine catabolic process"
evidence=IEA;ISO] [GO:0008732 "L-allo-threonine aldolase activity"
evidence=IDA] [GO:0009113 "purine nucleobase biosynthetic process"
evidence=IEA;ISO] [GO:0016597 "amino acid binding" evidence=IPI]
[GO:0019264 "glycine biosynthetic process from serine"
evidence=IDA] [GO:0030170 "pyridoxal phosphate binding"
evidence=ISO;IDA;TAS] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] [GO:0046655 "folic acid metabolic
process" evidence=IEA;ISO] [GO:0051262 "protein tetramerization"
evidence=ISO] [GO:0051289 "protein homotetramerization"
evidence=IDA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PROSITE:PS00096 RGD:1312011 GO:GO:0005829
GO:GO:0005739 GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0016597 GO:GO:0051289 GO:GO:0042802 GO:GO:0009113
GO:GO:0035999 GO:GO:0046655 GO:GO:0006565 GO:GO:0008732 KO:K00600
GO:GO:0004372 PANTHER:PTHR11680 HOGENOM:HOG000239405 GO:GO:0019264
CTD:6470 GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807
OrthoDB:EOG42Z4Q2 UniGene:Rn.3684 EMBL:AY383687 IPI:IPI00421364
RefSeq:NP_001041307.1 SMR:Q6TXG7 STRING:Q6TXG7
Ensembl:ENSRNOT00000007092 GeneID:287379 KEGG:rno:287379
UCSC:RGD:1312011 InParanoid:Q6TXG7 NextBio:625985
Genevestigator:Q6TXG7 Uniprot:Q6TXG7
Length = 681
Score = 345 (126.5 bits), Expect = 1.3e-30, P = 1.3e-30
Identities = 69/136 (50%), Positives = 94/136 (69%)
Query: 1 MGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMG 60
+GY++V+GG++NHL+L++L+ KG DG R EKVLEA IA NKNT PGD SA+ P G+R+G
Sbjct: 542 LGYKIVTGGSDNHLILMDLRPKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLG 601
Query: 61 TPALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSE-TQGTKLKDFVAT-TQSANFQSEIAK 118
TPALTSRG +EEDF K+A+F ++LT++I+S T LK+F T FQS +A
Sbjct: 602 TPALTSRGLLEEDFQKIAHFIHRGIELTLQIQSHMTMRATLKEFKEKLTGDEKFQSAVAA 661
Query: 119 RCHDVEEYAKQFPTIG 134
+VE +A F G
Sbjct: 662 LREEVENFASNFSLPG 677
>WB|WBGene00003214 [details] [associations]
symbol:mel-32 species:6239 "Caenorhabditis elegans"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0006563 "L-serine metabolic process" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0009792 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0006544 GO:GO:0035999 EMBL:FO080365 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:ERFRAIC GeneTree:ENSGT00390000002762 GO:GO:0009069 PIR:B88483
RefSeq:NP_741197.1 RefSeq:NP_741198.1 ProteinModelPortal:P50432
SMR:P50432 DIP:DIP-26240N IntAct:P50432 MINT:MINT-227953
STRING:P50432 PaxDb:P50432 PRIDE:P50432 EnsemblMetazoa:C05D11.11b.1
EnsemblMetazoa:C05D11.11b.2 EnsemblMetazoa:C05D11.11b.3
GeneID:175915 KEGG:cel:CELE_C05D11.11 UCSC:F44F4.6 CTD:175915
WormBase:C05D11.11a WormBase:C05D11.11b InParanoid:P50432
NextBio:890288 Uniprot:P50432
Length = 507
Score = 338 (124.0 bits), Expect = 1.6e-30, P = 1.6e-30
Identities = 69/136 (50%), Positives = 93/136 (68%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT 61
GY L +GGT+NHL+LV+L+ G++G+R E VL+ HIA NKNT PGDVSA+ PGGIR+GT
Sbjct: 371 GYALATGGTDNHLLLVDLRPIGVEGARAEHVLDLAHIACNKNTCPGDVSALRPGGIRLGT 430
Query: 62 PALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVATTQSAN-FQSEIAKRC 120
PALTSRGF E+DF KV F V++ K +E G LKDF + T++ F+ ++A
Sbjct: 431 PALTSRGFQEQDFEKVGDFIHEGVQIAKKYNAEA-GKTLKDFKSFTETNEPFKKDVADLA 489
Query: 121 HDVEEYAKQFPTIGFE 136
VEE++ +F G E
Sbjct: 490 KRVEEFSTKFEIPGNE 505
>UNIPROTKB|P50432 [details] [associations]
symbol:mel-32 "Serine hydroxymethyltransferase"
species:6239 "Caenorhabditis elegans" [GO:0030170 "pyridoxal
phosphate binding" evidence=TAS] [GO:0009790 "embryo development"
evidence=IMP] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=TAS] [GO:0009069 "serine family amino acid
metabolic process" evidence=TAS] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0009792 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0006544 GO:GO:0035999 EMBL:FO080365 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:ERFRAIC GeneTree:ENSGT00390000002762 GO:GO:0009069 PIR:B88483
RefSeq:NP_741197.1 RefSeq:NP_741198.1 ProteinModelPortal:P50432
SMR:P50432 DIP:DIP-26240N IntAct:P50432 MINT:MINT-227953
STRING:P50432 PaxDb:P50432 PRIDE:P50432 EnsemblMetazoa:C05D11.11b.1
EnsemblMetazoa:C05D11.11b.2 EnsemblMetazoa:C05D11.11b.3
GeneID:175915 KEGG:cel:CELE_C05D11.11 UCSC:F44F4.6 CTD:175915
WormBase:C05D11.11a WormBase:C05D11.11b InParanoid:P50432
NextBio:890288 Uniprot:P50432
Length = 507
Score = 338 (124.0 bits), Expect = 1.6e-30, P = 1.6e-30
Identities = 69/136 (50%), Positives = 93/136 (68%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT 61
GY L +GGT+NHL+LV+L+ G++G+R E VL+ HIA NKNT PGDVSA+ PGGIR+GT
Sbjct: 371 GYALATGGTDNHLLLVDLRPIGVEGARAEHVLDLAHIACNKNTCPGDVSALRPGGIRLGT 430
Query: 62 PALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVATTQSAN-FQSEIAKRC 120
PALTSRGF E+DF KV F V++ K +E G LKDF + T++ F+ ++A
Sbjct: 431 PALTSRGFQEQDFEKVGDFIHEGVQIAKKYNAEA-GKTLKDFKSFTETNEPFKKDVADLA 489
Query: 121 HDVEEYAKQFPTIGFE 136
VEE++ +F G E
Sbjct: 490 KRVEEFSTKFEIPGNE 505
>MGI|MGI:98299 [details] [associations]
symbol:Shmt1 "serine hydroxymethyltransferase 1 (soluble)"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0006544 "glycine metabolic process" evidence=ISO]
[GO:0006545 "glycine biosynthetic process" evidence=ISO]
[GO:0006563 "L-serine metabolic process" evidence=IEA] [GO:0006565
"L-serine catabolic process" evidence=ISO] [GO:0006730 "one-carbon
metabolic process" evidence=IEA] [GO:0008732 "L-allo-threonine
aldolase activity" evidence=ISO] [GO:0009113 "purine nucleobase
biosynthetic process" evidence=ISO] [GO:0016597 "amino acid
binding" evidence=ISO] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0019264 "glycine biosynthetic process from
serine" evidence=ISO] [GO:0030170 "pyridoxal phosphate binding"
evidence=ISO] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0046655 "folic acid metabolic process" evidence=ISO]
[GO:0051262 "protein tetramerization" evidence=ISO] [GO:0051289
"protein homotetramerization" evidence=ISO] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
MGI:MGI:98299 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0016597 GO:GO:0051289
GO:GO:0009113 GO:GO:0035999 GO:GO:0046655 GO:GO:0006565
EMBL:AL596215 GO:GO:0008732 eggNOG:COG0112 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 HOGENOM:HOG000239405 GO:GO:0019264 CTD:6470
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 OrthoDB:EOG42Z4Q2
ChiTaRS:SHMT1 EMBL:AF237702 EMBL:BC026055 EMBL:X94478 EMBL:X94479
IPI:IPI00118059 PIR:JC4959 RefSeq:NP_033197.2 UniGene:Mm.364956
PDB:1EJI PDBsum:1EJI ProteinModelPortal:P50431 SMR:P50431
STRING:P50431 PhosphoSite:P50431 REPRODUCTION-2DPAGE:P50431
SWISS-2DPAGE:P50431 PaxDb:P50431 PRIDE:P50431
Ensembl:ENSMUST00000018744 GeneID:20425 KEGG:mmu:20425
InParanoid:Q8R0X9 OMA:KEALEPW ChEMBL:CHEMBL4396
EvolutionaryTrace:P50431 NextBio:298438 Bgee:P50431
CleanEx:MM_SHMT1 Genevestigator:P50431
GermOnline:ENSMUSG00000020534 Uniprot:P50431
Length = 478
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 69/137 (50%), Positives = 95/137 (69%)
Query: 1 MGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMG 60
+GY++V+GG++NHL+L++L++KG DG R EKVLEA IA NKNT PGD SA+ P G+R+G
Sbjct: 339 LGYKIVTGGSDNHLILMDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLG 398
Query: 61 TPALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSE--TQGTKLKDFVATTQS-ANFQSEIA 117
TPALTSRG +EEDF KVA+F ++LT++I+S T+ T LK+F QS +A
Sbjct: 399 TPALTSRGLLEEDFQKVAHFIHRGIELTLQIQSHMATKAT-LKEFKEKLAGDEKIQSAVA 457
Query: 118 KRCHDVEEYAKQFPTIG 134
+VE +A F G
Sbjct: 458 TLREEVENFASNFSLPG 474
>POMBASE|SPAC18G6.04c [details] [associations]
symbol:shm2 "serine hydroxymethyltransferase Shm2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISS;IDA] [GO:0006544 "glycine
metabolic process" evidence=ISS] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IC] [GO:0009070 "serine family amino acid biosynthetic
process" evidence=ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 PomBase:SPAC18G6.04c
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0006730 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 PIR:T37918 RefSeq:NP_593668.2 STRING:Q10104
EnsemblFungi:SPAC18G6.04c.1 GeneID:2542242 OrthoDB:EOG4V1B88
NextBio:20803308 GO:GO:0009070 Uniprot:Q10104
Length = 488
Score = 334 (122.6 bits), Expect = 3.1e-30, P = 3.1e-30
Identities = 70/132 (53%), Positives = 94/132 (71%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT 61
GY+LVSGGT+ HLVLV+L +KG+DG+RVE++LE V+I+ANKNTVPGD SA++P G+R+GT
Sbjct: 353 GYKLVSGGTDTHLVLVDLTDKGVDGARVERILELVNISANKNTVPGDKSALIPRGLRLGT 412
Query: 62 PALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSET--QG-TKLKDFVATTQSANFQSEIAK 118
PA T+RGF E+DF +V D V LT KI +G +K +DF A + SEIAK
Sbjct: 413 PACTTRGFDEKDFERVVELIDEVVSLTKKINEAALKEGKSKFRDFKAYVGDGSKFSEIAK 472
Query: 119 RCHDVEEYAKQF 130
+V +A +F
Sbjct: 473 LKKEVITWAGKF 484
>RGD|1308582 [details] [associations]
symbol:Shmt2 "serine hydroxymethyltransferase 2 (mitochondrial)"
species:10116 "Rattus norvegicus" [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=ISO;IDA;TAS] [GO:0005739 "mitochondrion"
evidence=ISO;IDA;TAS] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO;IDA] [GO:0005758 "mitochondrial intermembrane space"
evidence=IDA] [GO:0005759 "mitochondrial matrix" evidence=ISO;IDA]
[GO:0006544 "glycine metabolic process" evidence=IDA;TAS]
[GO:0006545 "glycine biosynthetic process" evidence=IDA]
[GO:0006563 "L-serine metabolic process" evidence=TAS] [GO:0006564
"L-serine biosynthetic process" evidence=IDA] [GO:0006730
"one-carbon metabolic process" evidence=ISO] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IDA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IEA;ISO] [GO:0016597 "amino
acid binding" evidence=IPI] [GO:0019264 "glycine biosynthetic
process from serine" evidence=IDA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IDA;TAS] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0051289 "protein homotetramerization"
evidence=IDA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 RGD:1308582
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0015630 GO:GO:0005743
GO:GO:0005758 GO:GO:0005759 GO:GO:0008284 GO:GO:0003682
GO:GO:0016597 GO:GO:0051289 GO:GO:0042802 GO:GO:0042645
GO:GO:0008168 GO:GO:0035999 GO:GO:0006564 GO:GO:0008732
eggNOG:COG0112 KO:K00600 GO:GO:0004372 PANTHER:PTHR11680
OMA:GKIDYED HOGENOM:HOG000239405 GO:GO:0019264
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 CTD:6472
OrthoDB:EOG4G4GQ7 EMBL:BC085331 IPI:IPI00195109
RefSeq:NP_001008323.1 UniGene:Rn.9214 SMR:Q5U3Z7 IntAct:Q5U3Z7
STRING:Q5U3Z7 Ensembl:ENSRNOT00000011082 GeneID:299857
KEGG:rno:299857 InParanoid:Q5U3Z7 NextBio:645904
Genevestigator:Q5U3Z7 Uniprot:Q5U3Z7
Length = 504
Score = 335 (123.0 bits), Expect = 3.4e-30, P = 3.4e-30
Identities = 68/137 (49%), Positives = 93/137 (67%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT 61
GY LVSGGT+ HLVLV+L+ KG+DG+R E+VLE V I ANKNT PGD SA+ PGG+R+G
Sbjct: 369 GYSLVSGGTDTHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGA 428
Query: 62 PALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVA-TTQSANFQSEIAKRC 120
PALTSR F E+DF +V F D V + +++K +T KL+DF + + +A
Sbjct: 429 PALTSRQFREDDFRRVVDFIDEGVNIGLEVKRKT--AKLQDFKSFLLKDPETSQRLANLR 486
Query: 121 HDVEEYAKQFPTIGFEK 137
VE++A+ FP GF++
Sbjct: 487 QQVEQFARGFPMPGFDE 503
>UNIPROTKB|Q5E9P9 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9913 "Bos taurus" [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0051262 "protein
tetramerization" evidence=IEA] [GO:0046655 "folic acid metabolic
process" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0009113 "purine nucleobase biosynthetic
process" evidence=IEA] [GO:0006565 "L-serine catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0006544 "glycine
metabolic process" evidence=IEA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0051262 GO:GO:0009113 GO:GO:0006544 GO:GO:0035999
GO:GO:0046655 GO:GO:0006565 eggNOG:COG0112 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 HOGENOM:HOG000239405 EMBL:BT020871 EMBL:BC112563
IPI:IPI00695792 RefSeq:NP_001015553.1 UniGene:Bt.88340
ProteinModelPortal:Q5E9P9 SMR:Q5E9P9 STRING:Q5E9P9 PRIDE:Q5E9P9
Ensembl:ENSBTAT00000022732 GeneID:509002 KEGG:bta:509002 CTD:6470
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 InParanoid:Q5E9P9
OrthoDB:EOG42Z4Q2 NextBio:20868773 Uniprot:Q5E9P9
Length = 484
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 69/137 (50%), Positives = 94/137 (68%)
Query: 1 MGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMG 60
+GY +V+GG++NHL+LV+L++KG DG R EKVLEA IA NKNT PGD SA+ P G+R+G
Sbjct: 345 LGYRVVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLG 404
Query: 61 TPALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTK--LKDFVATTQSAN-FQSEIA 117
TPALTSRG +EEDF KVA+F ++LT++I+ + G K LK+F+ A +A
Sbjct: 405 TPALTSRGLLEEDFQKVAHFIHRGIELTLQIQ-DAVGVKATLKEFMEKLAGAEEHHRAVA 463
Query: 118 KRCHDVEEYAKQFPTIG 134
+VE +A FP G
Sbjct: 464 ALRAEVESFATLFPLPG 480
>UNIPROTKB|P14519 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9986 "Oryctolagus cuniculus" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0005743 "mitochondrial inner
membrane" evidence=ISS] [GO:0005759 "mitochondrial matrix"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0005743 GO:GO:0003682 GO:GO:0042645 GO:GO:0006544
GO:GO:0035999 eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HOVERGEN:HBG002807 CTD:6472
EMBL:X91902 RefSeq:NP_001075874.1 UniGene:Ocu.3292
ProteinModelPortal:P14519 SMR:P14519 STRING:P14519 PRIDE:P14519
GeneID:100009293 Uniprot:P14519
Length = 504
Score = 333 (122.3 bits), Expect = 5.9e-30, P = 5.9e-30
Identities = 68/135 (50%), Positives = 92/135 (68%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT 61
GY LVSGGT+NHLVLV+L+ KG+DG+R E+VLE V I ANKNT PGD SA+ PGG+R+G
Sbjct: 369 GYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGA 428
Query: 62 PALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVA-TTQSANFQSEIAKRC 120
PALTSR F E+DF +V F D V + +++K +T KL+DF + + +A
Sbjct: 429 PALTSRQFREDDFRRVVDFIDEGVNIGLEVKRKT--AKLQDFKSFLLKDPETSQHLADLR 486
Query: 121 HDVEEYAKQFPTIGF 135
V+++A+ FP GF
Sbjct: 487 RRVQQFARAFPMPGF 501
>UNIPROTKB|E1BS67 [details] [associations]
symbol:SHMT1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006565 "L-serine catabolic process" evidence=IEA] [GO:0009113
"purine nucleobase biosynthetic process" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0046655
"folic acid metabolic process" evidence=IEA] [GO:0051262 "protein
tetramerization" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0051262 GO:GO:0009113 GO:GO:0006544 GO:GO:0035999
GO:GO:0046655 GO:GO:0006565 GO:GO:0004372 PANTHER:PTHR11680
GeneTree:ENSGT00390000002762 OMA:VDLRESH EMBL:AADN02023704
IPI:IPI00573440 Ensembl:ENSGALT00000008093 Uniprot:E1BS67
Length = 486
Score = 331 (121.6 bits), Expect = 6.9e-30, P = 6.9e-30
Identities = 62/135 (45%), Positives = 91/135 (67%)
Query: 1 MGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMG 60
MGY++V+GG++NHL+L++L+N+G DG R E+VLE IA NKNT PGDVSA+ P G+R G
Sbjct: 348 MGYDIVTGGSDNHLILLDLRNRGTDGGRAERVLELCSIACNKNTCPGDVSALRPSGLRFG 407
Query: 61 TPALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQG-TKLKDFVATTQSANFQSEIAKR 119
TPALTSRGF ++DF VA + ++LT++++ + LK+F + +Q E+
Sbjct: 408 TPALTSRGFRQDDFRTVARYIHKGIELTLRVQKDMNPKATLKEFKEKLEEEKYQGELKAL 467
Query: 120 CHDVEEYAKQFPTIG 134
+VE +A FP G
Sbjct: 468 KEEVEAFAATFPLPG 482
>POMBASE|SPAC24C9.12c [details] [associations]
symbol:SPAC24C9.12c "glycine hydroxymethyltransferase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006544 "glycine
metabolic process" evidence=ISS] [GO:0006563 "L-serine metabolic
process" evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 PomBase:SPAC24C9.12c
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CU329670 GO:GO:0006730
GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OrthoDB:EOG444PTT PIR:T38353 RefSeq:NP_594037.1
ProteinModelPortal:O13972 SMR:O13972 STRING:O13972 PRIDE:O13972
EnsemblFungi:SPAC24C9.12c.1 GeneID:2542651 KEGG:spo:SPAC24C9.12c
OMA:HMVLVDV NextBio:20803700 Uniprot:O13972
Length = 467
Score = 312 (114.9 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 60/132 (45%), Positives = 86/132 (65%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT 61
GY+L + GT++H+VLV++K+KG+DG+R E+VLE ++I NKNTVP D SA P GIR+GT
Sbjct: 331 GYKLAADGTDSHMVLVDVKSKGVDGARAERVLELINIVTNKNTVPSDKSAFSPSGIRVGT 390
Query: 62 PALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSET--QGTKLKDFVATTQSANFQSEIAKR 119
PA+T+RGF E+DF +V + D A+ ++ E KLKDF A E+ +
Sbjct: 391 PAMTTRGFKEQDFVRVVDYIDRALTFAANLQKELPKDANKLKDFKAKLGEGEQYPELVQL 450
Query: 120 CHDVEEYAKQFP 131
+V E+A FP
Sbjct: 451 QKEVAEWASSFP 462
Score = 34 (17.0 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 1 MGYELVSGGTENH 13
MG +L SGG +H
Sbjct: 125 MGLDLPSGGHLSH 137
>CGD|CAL0003822 [details] [associations]
symbol:SHM1 species:5476 "Candida albicans" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0006544 "glycine metabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006730 "one-carbon metabolic
process" evidence=ISS] [GO:0009070 "serine family amino acid
biosynthetic process" evidence=IEA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0003822 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
EMBL:AACQ01000187 RefSeq:XP_711682.1 RefSeq:XP_888942.1
ProteinModelPortal:Q59PP7 SMR:Q59PP7 STRING:Q59PP7 GeneID:3646724
GeneID:3703901 KEGG:cal:CaO19.1342 KEGG:cal:CaO19_1342
Uniprot:Q59PP7
Length = 493
Score = 327 (120.2 bits), Expect = 2.4e-29, P = 2.4e-29
Identities = 63/134 (47%), Positives = 96/134 (71%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT 61
G++LVS GT+ HL+LV+L+++ IDG+RVE VLE +IA NKNTVPGDVSA+ P G+R+GT
Sbjct: 358 GFKLVSDGTDTHLILVDLRSRNIDGARVEAVLERANIATNKNTVPGDVSALFPSGLRVGT 417
Query: 62 PALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCH 121
PA+T+RGF E+F KVA F D AV + +++K++ QG K+ +A+ + +S+ K+
Sbjct: 418 PAMTTRGFGPEEFDKVAEFIDQAVNIAIELKAQEQGKVPKELLASFKKLADESDKVKQLD 477
Query: 122 -DVEEYAKQFPTIG 134
+V + ++P G
Sbjct: 478 KEVVSWVSKYPVPG 491
>UNIPROTKB|Q59PP7 [details] [associations]
symbol:SHM1 "Putative uncharacterized protein SHM1"
species:237561 "Candida albicans SC5314" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006544 "glycine metabolic
process" evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0003822
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
EMBL:AACQ01000187 RefSeq:XP_711682.1 RefSeq:XP_888942.1
ProteinModelPortal:Q59PP7 SMR:Q59PP7 STRING:Q59PP7 GeneID:3646724
GeneID:3703901 KEGG:cal:CaO19.1342 KEGG:cal:CaO19_1342
Uniprot:Q59PP7
Length = 493
Score = 327 (120.2 bits), Expect = 2.4e-29, P = 2.4e-29
Identities = 63/134 (47%), Positives = 96/134 (71%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT 61
G++LVS GT+ HL+LV+L+++ IDG+RVE VLE +IA NKNTVPGDVSA+ P G+R+GT
Sbjct: 358 GFKLVSDGTDTHLILVDLRSRNIDGARVEAVLERANIATNKNTVPGDVSALFPSGLRVGT 417
Query: 62 PALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCH 121
PA+T+RGF E+F KVA F D AV + +++K++ QG K+ +A+ + +S+ K+
Sbjct: 418 PAMTTRGFGPEEFDKVAEFIDQAVNIAIELKAQEQGKVPKELLASFKKLADESDKVKQLD 477
Query: 122 -DVEEYAKQFPTIG 134
+V + ++P G
Sbjct: 478 KEVVSWVSKYPVPG 491
>ZFIN|ZDB-GENE-071213-1 [details] [associations]
symbol:shmt2 "serine hydroxymethyltransferase 2
(mitochondrial)" species:7955 "Danio rerio" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA;IDA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA;IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00464
PIRSF:PIRSF000412 ZFIN:ZDB-GENE-071213-1 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0008168 GO:GO:0006544
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 GeneTree:ENSGT00390000002762
HOVERGEN:HBG002807 CTD:6472 EMBL:CABZ01098501 EMBL:CABZ01112226
EMBL:CABZ01112227 EMBL:CABZ01112228 EMBL:CABZ01112229
EMBL:CABZ01112230 EMBL:EF213101 IPI:IPI00862356
RefSeq:NP_001116846.1 UniGene:Dr.128606 SMR:A9LDD9 STRING:A9LDD9
Ensembl:ENSDART00000111064 GeneID:100144628 KEGG:dre:100144628
NextBio:20791462 Uniprot:A9LDD9
Length = 492
Score = 325 (119.5 bits), Expect = 4.1e-29, P = 4.1e-29
Identities = 70/135 (51%), Positives = 90/135 (66%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT 61
GY LVSGGT+NHLVLV+L+ +G+DG+R E+VLE V I ANKNT PGD SA+ PGG+R+GT
Sbjct: 357 GYTLVSGGTDNHLVLVDLRPQGMDGARAERVLELVSITANKNTCPGDKSALTPGGLRLGT 416
Query: 62 PALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVA-TTQSANFQSEIAKRC 120
PALTSR E DF KV F +++ +K +T+ KL DF + + A S IA
Sbjct: 417 PALTSRQLKECDFQKVVEFIHQGIQIGQDVKKKTK--KLSDFKSFLLEDAETVSRIADLR 474
Query: 121 HDVEEYAKQFPTIGF 135
VE +A+ FP GF
Sbjct: 475 SRVEAFARPFPMPGF 489
>ASPGD|ASPL0000008876 [details] [associations]
symbol:AN10745 species:162425 "Emericella nidulans"
[GO:0006544 "glycine metabolic process" evidence=IEA] [GO:0006563
"L-serine metabolic process" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:BN001301 GO:GO:0008168 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 OMA:LELTHQF ProteinModelPortal:C8V028
EnsemblFungi:CADANIAT00007210 Uniprot:C8V028
Length = 600
Score = 328 (120.5 bits), Expect = 6.0e-29, P = 6.0e-29
Identities = 73/148 (49%), Positives = 102/148 (68%)
Query: 1 MGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMG 60
+GY +VSGGT+NHLVLV+LKN+G+DG+RVE+VLE +A+NKNTVPGD SA+ PGG+R+G
Sbjct: 454 LGYNIVSGGTDNHLVLVDLKNRGVDGARVERVLELCGVASNKNTVPGDRSALKPGGLRLG 513
Query: 61 TPALTSRGFVEEDFAKVAYFFDAAVKLTVKI-KSE-----TQGTK----LKDFVATTQSA 110
TPA+T+RGF EDF +VA D AV +T K+ KS ++G K +K F+ +
Sbjct: 514 TPAMTTRGFQPEDFRRVADIVDRAVTITQKLDKSAKESAASKGVKNPNTVKAFLEYVGNG 573
Query: 111 NFQSEIAKRCHDVEEYAKQFPTIGFEKE 138
SEI + +VE++A F + + KE
Sbjct: 574 EEISEIVQLRQEVEDWAGTF-NLPWAKE 600
>TAIR|locus:2127806 [details] [associations]
symbol:SHM3 "serine hydroxymethyltransferase 3"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006544 "glycine
metabolic process" evidence=IEA;ISS] [GO:0006563 "L-serine
metabolic process" evidence=IEA;ISS] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0009536 "plastid" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0006164 "purine nucleotide biosynthetic process"
evidence=RCA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0009570
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP002687 GO:GO:0008168
GO:GO:0006544 GO:GO:0035999 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 OMA:SKELTGW IPI:IPI00529123 RefSeq:NP_001119098.1
RefSeq:NP_567895.1 UniGene:At.27717 ProteinModelPortal:F4JUC7
SMR:F4JUC7 PRIDE:F4JUC7 EnsemblPlants:AT4G32520.1
EnsemblPlants:AT4G32520.2 GeneID:829387 KEGG:ath:AT4G32520
Uniprot:F4JUC7
Length = 529
Score = 325 (119.5 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 66/136 (48%), Positives = 93/136 (68%)
Query: 1 MGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMG 60
+G++LVSGG++NHLVLV+L+ G+DG+RVEK+L+ I NKN+VPGD SA+VPGGIR+G
Sbjct: 393 LGFKLVSGGSDNHLVLVDLRPMGMDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIG 452
Query: 61 TPALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVATTQSANFQ-SEIAKR 119
+PA+T+RG E+DF VA F V++T++ K G+KL+DF S F E K
Sbjct: 453 SPAMTTRGLSEKDFVVVADFIKEGVEITMEAKKAAPGSKLQDFNKFVTSPEFPLKERVKS 512
Query: 120 CHD-VEEYAKQFPTIG 134
+ VE + +FP G
Sbjct: 513 LKERVETFTSRFPIPG 528
>SGD|S000000467 [details] [associations]
symbol:SHM1 "Mitochondrial serine hydroxymethyltransferase"
species:4932 "Saccharomyces cerevisiae" [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA;IMP] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA;IMP] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IEA;IGI;IMP] [GO:0009070 "serine family amino acid
biosynthetic process" evidence=IGI] [GO:0016740 "transferase
activity" evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 SGD:S000000467
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:BK006936 EMBL:X70529
EMBL:Z36131 GO:GO:0006730 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 GeneTree:ENSGT00390000002762
OrthoDB:EOG4V1B88 GO:GO:0009070 EMBL:L22528 PIR:S29348
RefSeq:NP_009822.4 RefSeq:NP_009827.3 ProteinModelPortal:P37292
SMR:P37292 DIP:DIP-4952N IntAct:P37292 MINT:MINT-548725
STRING:P37292 PaxDb:P37292 PeptideAtlas:P37292 PRIDE:P37292
EnsemblFungi:YBR263W GeneID:852565 GeneID:852571 KEGG:sce:YBR263W
KEGG:sce:YBR268W CYGD:YBR263w OMA:GFNENDV
BioCyc:MetaCyc:YBR263W-MONOMER NextBio:971682 Genevestigator:P37292
GermOnline:YBR263W Uniprot:P37292
Length = 490
Score = 322 (118.4 bits), Expect = 8.9e-29, P = 8.9e-29
Identities = 63/137 (45%), Positives = 94/137 (68%)
Query: 1 MGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMG 60
MGY+LVSGGT+NHL++++L +DG+RVE +L A++IAANKNT+PGD SA+ P G+R+G
Sbjct: 352 MGYKLVSGGTDNHLIVIDLSGTQVDGARVETILSALNIAANKNTIPGDKSALFPSGLRIG 411
Query: 61 TPALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVATTQS---ANFQSEIA 117
TPA+T+RGF E+F++VA + D+AVKL +K+ TKL + N SE+A
Sbjct: 412 TPAMTTRGFGREEFSQVAKYIDSAVKLAENLKTLEPTTKLDARSRLNEFKKLCNESSEVA 471
Query: 118 KRCHDVEEYAKQFPTIG 134
++ ++ Q+P G
Sbjct: 472 ALSGEISKWVGQYPVPG 488
>UNIPROTKB|E2RIV3 [details] [associations]
symbol:SHMT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0051262 "protein tetramerization" evidence=IEA]
[GO:0046655 "folic acid metabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0009113 "purine nucleobase biosynthetic process" evidence=IEA]
[GO:0006565 "L-serine catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005739
GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0051262 GO:GO:0009113
GO:GO:0006544 GO:GO:0035999 GO:GO:0046655 GO:GO:0006565 KO:K00600
GO:GO:0004372 PANTHER:PTHR11680 CTD:6470
GeneTree:ENSGT00390000002762 OMA:VDLRESH EMBL:AAEX03003713
EMBL:AAEX03003714 RefSeq:XP_851819.2 Ensembl:ENSCAFT00000028996
GeneID:489536 KEGG:cfa:489536 Uniprot:E2RIV3
Length = 484
Score = 317 (116.6 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 65/136 (47%), Positives = 91/136 (66%)
Query: 1 MGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMG 60
+GY++V+GG++NHL+LV+L++KG DG R EKVLEA IA NKNT PGD SA+ P G+R+G
Sbjct: 345 LGYKVVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLG 404
Query: 61 TPALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQG-TKLKDF-VATTQSANFQSEIAK 118
TPALTSRG +E++F KVA F ++LT++I+++ LK+F Q I
Sbjct: 405 TPALTSRGLLEKEFQKVAQFVHRGIELTLQIQNDIGARATLKEFREKLAGDEKHQRAIRA 464
Query: 119 RCHDVEEYAKQFPTIG 134
+VE +A FP G
Sbjct: 465 LREEVESFASLFPLPG 480
>CGD|CAL0001464 [details] [associations]
symbol:SHM2 species:5476 "Candida albicans" [GO:0005737
"cytoplasm" evidence=ISS] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006544
"glycine metabolic process" evidence=ISS] [GO:0006730 "one-carbon
metabolic process" evidence=ISS] [GO:0043332 "mating projection
tip" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0001464 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 EMBL:AACQ01000046
EMBL:AACQ01000047 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112
KO:K00600 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 EMBL:AF009966 RefSeq:XP_718020.1
RefSeq:XP_718086.1 ProteinModelPortal:O13426 SMR:O13426
STRING:O13426 COMPLUYEAST-2DPAGE:O13426 GeneID:3640306
GeneID:3640372 KEGG:cal:CaO19.13173 KEGG:cal:CaO19.5750
Uniprot:O13426
Length = 470
Score = 310 (114.2 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 64/133 (48%), Positives = 91/133 (68%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT 61
GY+LVS GT++H+VLV+LK+K IDG+RVE V E ++IA NKN++PGD SA+VPGG+R+G
Sbjct: 338 GYKLVSDGTDSHMVLVSLKDKQIDGARVETVCEKINIALNKNSIPGDKSALVPGGVRIGA 397
Query: 62 PALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSET--QGTKLKDFVATTQSANFQSEIAKR 119
PA+T+RG EEDF K+ + D AV +++S+ KLKDF + + SE K
Sbjct: 398 PAMTTRGLGEEDFKKIVSYIDFAVNYAKEVQSQLPKDANKLKDF---KNAVSGDSEKLKA 454
Query: 120 CHD-VEEYAKQFP 131
D + ++A FP
Sbjct: 455 VRDEIYQWAGSFP 467
>UNIPROTKB|O13426 [details] [associations]
symbol:SHM2 "Serine hydroxymethyltransferase, cytosolic"
species:237561 "Candida albicans SC5314" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006544 "glycine metabolic process"
evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0001464
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 EMBL:AACQ01000046
EMBL:AACQ01000047 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112
KO:K00600 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 EMBL:AF009966 RefSeq:XP_718020.1
RefSeq:XP_718086.1 ProteinModelPortal:O13426 SMR:O13426
STRING:O13426 COMPLUYEAST-2DPAGE:O13426 GeneID:3640306
GeneID:3640372 KEGG:cal:CaO19.13173 KEGG:cal:CaO19.5750
Uniprot:O13426
Length = 470
Score = 310 (114.2 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 64/133 (48%), Positives = 91/133 (68%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT 61
GY+LVS GT++H+VLV+LK+K IDG+RVE V E ++IA NKN++PGD SA+VPGG+R+G
Sbjct: 338 GYKLVSDGTDSHMVLVSLKDKQIDGARVETVCEKINIALNKNSIPGDKSALVPGGVRIGA 397
Query: 62 PALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSET--QGTKLKDFVATTQSANFQSEIAKR 119
PA+T+RG EEDF K+ + D AV +++S+ KLKDF + + SE K
Sbjct: 398 PAMTTRGLGEEDFKKIVSYIDFAVNYAKEVQSQLPKDANKLKDF---KNAVSGDSEKLKA 454
Query: 120 CHD-VEEYAKQFP 131
D + ++A FP
Sbjct: 455 VRDEIYQWAGSFP 467
>UNIPROTKB|E2R4L7 [details] [associations]
symbol:SHMT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 OMA:GKIDYED
GeneTree:ENSGT00390000002762 EMBL:AAEX03006944 EMBL:AAEX03006943
Ensembl:ENSCAFT00000000313 NextBio:20893182 Uniprot:E2R4L7
Length = 531
Score = 313 (115.2 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 61/102 (59%), Positives = 79/102 (77%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT 61
GY LVSGGT+NHLVLV+L+ KG+DG+R E+VLE V I ANKNT PGD SA+ PGG+R+G
Sbjct: 414 GYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGA 473
Query: 62 PALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDF 103
PALTSR F E+DF +V F D V + +++K++T KL+DF
Sbjct: 474 PALTSRQFREDDFRRVVDFIDEGVHIGLEVKNKT--AKLQDF 513
>UNIPROTKB|H0YIZ0 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase" species:9606
"Homo sapiens" [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 EMBL:AC137834 HGNC:HGNC:10852
ChiTaRS:SHMT2 Ensembl:ENST00000557529 Uniprot:H0YIZ0
Length = 264
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 58/94 (61%), Positives = 74/94 (78%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT 61
GY LVSGGT+NHLVLV+L+ KG+DG+R E+VLE V I ANKNT PGD SA+ PGG+R+G
Sbjct: 169 GYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGA 228
Query: 62 PALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSET 95
PALTSR F E+DF +V F D V + +++KS+T
Sbjct: 229 PALTSRQFREDDFRRVVDFIDEGVNIGLEVKSKT 262
>TAIR|locus:2129251 [details] [associations]
symbol:SHM4 "serine hydroxymethyltransferase 4"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006544 "glycine metabolic process"
evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=ISS;IDA] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0016020 "membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005829 GO:GO:0005886
GO:GO:0009506 GO:GO:0046686 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:Z97335 GO:GO:0008168
GO:GO:0006544 GO:GO:0035999 EMBL:AL161537 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:LKEVASP HSSP:P07511 ProtClustDB:PLN03226 EMBL:AF361589
EMBL:AY093987 IPI:IPI00532971 PIR:B71400 RefSeq:NP_193129.1
UniGene:At.23373 ProteinModelPortal:O23254 SMR:O23254 STRING:O23254
PaxDb:O23254 PRIDE:O23254 ProMEX:O23254 EnsemblPlants:AT4G13930.1
GeneID:827027 KEGG:ath:AT4G13930 TAIR:At4g13930 InParanoid:O23254
PhylomeDB:O23254 Genevestigator:O23254 Uniprot:O23254
Length = 471
Score = 292 (107.8 bits), Expect = 5.3e-27, Sum P(2) = 5.3e-27
Identities = 62/142 (43%), Positives = 90/142 (63%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT 61
GY++V+ GTENHLVL +L+ G+ G++VEK+ + I NKN V GD SA+ PGG+R+G
Sbjct: 333 GYQIVTNGTENHLVLWDLRPLGLTGNKVEKLCDLCSITLNKNAVFGDSSALAPGGVRIGA 392
Query: 62 PALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCH 121
PA+TSRG VE+DF ++ F AV LT+ I+ +T G LKDF + ++ +
Sbjct: 393 PAMTSRGLVEKDFEQIGEFLSRAVTLTLDIQ-KTYGKLLKDF---NKGLVNNKDLDQLKA 448
Query: 122 DVEEYAKQFPTIGFEKETMKYK 143
DVE+++ + GF MKYK
Sbjct: 449 DVEKFSASYEMPGFLMSEMKYK 470
Score = 33 (16.7 bits), Expect = 5.3e-27, Sum P(2) = 5.3e-27
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 1 MGYELVSGGTENH 13
MG +L SGG H
Sbjct: 125 MGLDLPSGGHLTH 137
>ZFIN|ZDB-GENE-040426-1558 [details] [associations]
symbol:shmt1 "serine hydroxymethyltransferase 1
(soluble)" species:7955 "Danio rerio" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0006563 "L-serine metabolic process" evidence=IEA] [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=IEA;ISS;IDA]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006730
"one-carbon metabolic process" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
ZFIN:ZDB-GENE-040426-1558 GO:GO:0005829 GO:GO:0005634 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 GeneTree:ENSGT00390000002762
EMBL:BX649440 IPI:IPI00994921 Ensembl:ENSDART00000124883
Bgee:F1QY03 Uniprot:F1QY03
Length = 504
Score = 307 (113.1 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 66/137 (48%), Positives = 93/137 (67%)
Query: 2 GYELVS--GGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRM 59
GY++V+ GG++NHL+LV+L++ G DG R EKVLEA IA NKNT PGD SA+ P G+R+
Sbjct: 364 GYKVVTDKGGSDNHLILVDLRSNGTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRL 423
Query: 60 GTPALTSRGFVEEDFAKVAYFFDAAVKLTVKI-KSETQGTKLKDFVAT-TQSANFQSEIA 117
G+PALTSRG +EE F KVA F + LT++I K+ LK+F Q+ +Q +I
Sbjct: 424 GSPALTSRGLLEEHFHKVAEFIHQGIVLTLEIQKNMNPKATLKEFKEELAQNEKYQLKIK 483
Query: 118 KRCHDVEEYAKQFPTIG 134
+ +VE++A +FP G
Sbjct: 484 EIRKEVEDFAGKFPMPG 500
>ASPGD|ASPL0000040474 [details] [associations]
symbol:AN3058 species:162425 "Emericella nidulans"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;RCA] [GO:0006520 "cellular amino acid metabolic
process" evidence=RCA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006544 "glycine
metabolic process" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:BN001306 GO:GO:0008168 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 OMA:FRRGVRS ProteinModelPortal:C8VIR5
EnsemblFungi:CADANIAT00010021 Uniprot:C8VIR5
Length = 471
Score = 303 (111.7 bits), Expect = 1.0e-26, P = 1.0e-26
Identities = 61/133 (45%), Positives = 89/133 (66%)
Query: 1 MGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMG 60
+G++LVS GT++H+VLV+L+ K +DG+RVE VLE ++IA NKN++PGD SA+ P GIR+G
Sbjct: 337 IGHKLVSDGTDSHMVLVDLRPKSLDGARVEAVLEQINIACNKNSIPGDKSALTPCGIRIG 396
Query: 61 TPALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSE--TQGTKLKDFVATTQSANFQSEIAK 118
PA+TSRG EEDF ++A + D A+ + +++ T KLKDF A S EI
Sbjct: 397 APAMTSRGMGEEDFKRIARYIDQAINICKSVQAALPTDANKLKDFKAKVASGTVP-EIND 455
Query: 119 RCHDVEEYAKQFP 131
++ +A FP
Sbjct: 456 LRKEIAAWASTFP 468
>DICTYBASE|DDB_G0291652 [details] [associations]
symbol:shmt2 "serine hydroxymethyltransferase 2"
species:44689 "Dictyostelium discoideum" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA;ISS] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IEA;ISS] [GO:0005759 "mitochondrial matrix" evidence=ISS]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
dictyBase:DDB_G0291652 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AAFI02000177 GenomeReviews:CM000155_GR GO:GO:0005759
GO:GO:0006730 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 OMA:DYLIDMD
HSSP:P34897 ProtClustDB:PTZ00094 RefSeq:XP_635129.1
ProteinModelPortal:Q54EW1 SMR:Q54EW1 STRING:Q54EW1 PRIDE:Q54EW1
EnsemblProtists:DDB0230073 GeneID:8628075 KEGG:ddi:DDB_G0291652
Uniprot:Q54EW1
Length = 481
Score = 289 (106.8 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 60/130 (46%), Positives = 87/130 (66%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT 61
GY LV+ GT+NHLVL +L+ +GI GS++EK + HI NKN V GD +A+ PGG+R+G
Sbjct: 351 GYSLVTEGTDNHLVLWDLRPQGITGSKIEKACDEAHITVNKNAVYGDTNAIAPGGVRLGA 410
Query: 62 PALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCH 121
PALTSRG E+DF KV F D VK+++ I+S+ G K+ DF Q A ++ K+
Sbjct: 411 PALTSRGLKEQDFVKVVDFLDRVVKISLDIQSKV-GKKMPDF----QRAIADNQDLKQIR 465
Query: 122 -DVEEYAKQF 130
+V+E++ +F
Sbjct: 466 QEVKEFSTKF 475
Score = 33 (16.7 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 1 MGYELVSGGTENH 13
MG +L SGG H
Sbjct: 147 MGLDLPSGGHLTH 159
>FB|FBgn0029823 [details] [associations]
symbol:CG3011 species:7227 "Drosophila melanogaster"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006564 "L-serine biosynthetic process"
evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0006544 "glycine
metabolic process" evidence=IEA] [GO:0048149 "behavioral response
to ethanol" evidence=IMP] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE014298 GO:GO:0048149
GO:GO:0006544 GO:GO:0035999 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 GeneTree:ENSGT00390000002762 HSSP:P07511
OMA:VDLRESH UniGene:Dm.11053 GeneID:31524 KEGG:dme:Dmel_CG3011
FlyBase:FBgn0029823 GenomeRNAi:31524 NextBio:774055 EMBL:BT011432
RefSeq:NP_572278.1 SMR:Q9W457 IntAct:Q9W457 MINT:MINT-313386
STRING:Q9W457 EnsemblMetazoa:FBtr0070827 UCSC:CG3011-RA
InParanoid:Q9W457 Uniprot:Q9W457
Length = 537
Score = 299 (110.3 bits), Expect = 6.0e-26, P = 6.0e-26
Identities = 58/136 (42%), Positives = 91/136 (66%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT 61
GY++ +GGT+ HLVLV+++ G+ G++ E +LE V IA NKNTVPGD SAM P GIR+GT
Sbjct: 400 GYQVATGGTDVHLVLVDVRKAGLTGAKAEYILEEVGIACNKNTVPGDKSAMNPSGIRLGT 459
Query: 62 PALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVAT-TQSANFQSEIAKRC 120
PALT+RG E+D +V F DAA+K+ V+ K+ D+ T ++ ++++ +
Sbjct: 460 PALTTRGLAEQDIEQVVAFIDAALKVGVQAAKLAGSPKITDYHKTLAENVELKAQVDEIR 519
Query: 121 HDVEEYAKQFPTIGFE 136
+V +++++FP G E
Sbjct: 520 KNVAQFSRKFPLPGLE 535
>SGD|S000004048 [details] [associations]
symbol:SHM2 "Cytosolic serine hydroxymethyltransferase"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA;IMP;IDA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0006730 "one-carbon metabolic
process" evidence=IEA;IGI;IMP] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;IMP] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0043332 "mating projection
tip" evidence=IDA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 SGD:S000004048
GO:GO:0005886 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0043332 EMBL:BK006945 GO:GO:0006730 GO:GO:0006544
GO:GO:0035999 EMBL:X94607 eggNOG:COG0112 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
GeneTree:ENSGT00390000002762 EMBL:L22529 EMBL:Z73230 PIR:S61632
RefSeq:NP_013159.1 ProteinModelPortal:P37291 SMR:P37291
DIP:DIP-2602N IntAct:P37291 MINT:MINT-423439 STRING:P37291
PaxDb:P37291 PeptideAtlas:P37291 PRIDE:P37291 EnsemblFungi:YLR058C
GeneID:850747 KEGG:sce:YLR058C CYGD:YLR058c OMA:FRRGVRS
OrthoDB:EOG444PTT BioCyc:MetaCyc:YLR058C-MONOMER NextBio:966873
Genevestigator:P37291 GermOnline:YLR058C Uniprot:P37291
Length = 469
Score = 296 (109.3 bits), Expect = 6.4e-26, P = 6.4e-26
Identities = 55/133 (41%), Positives = 90/133 (67%)
Query: 1 MGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMG 60
+GY LVS GT++H+VLV+L+ KG+DG+RVE + E ++IA NKN++PGD SA+VPGG+R+G
Sbjct: 336 LGYRLVSNGTDSHMVLVSLREKGVDGARVEYICEKINIALNKNSIPGDKSALVPGGVRIG 395
Query: 61 TPALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSET--QGTKLKDFVATTQSANFQSEIAK 118
PA+T+RG EEDF ++ + + AV+ +++ +LKDF A + K
Sbjct: 396 APAMTTRGMGEEDFHRIVQYINKAVEFAQQVQQSLPKDACRLKDFKAKVDEGSDVLNTWK 455
Query: 119 RCHDVEEYAKQFP 131
+ ++ ++A ++P
Sbjct: 456 K--EIYDWAGEYP 466
>TAIR|locus:2119545 [details] [associations]
symbol:EDA36 "EMBRYO SAC DEVELOPMENT ARREST 37"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006544 "glycine metabolic process"
evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0010197 "polar nucleus fusion" evidence=IMP]
[GO:0009555 "pollen development" evidence=IMP] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009555 GO:GO:0008168
GO:GO:0006544 GO:GO:0010197 GO:GO:0035999 EMBL:AL035528
EMBL:AL161537 eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HSSP:P07511
ProtClustDB:PLN03226 IPI:IPI00536506 PIR:T05258 RefSeq:NP_193125.1
UniGene:At.33326 ProteinModelPortal:Q9SVM4 SMR:Q9SVM4 STRING:Q9SVM4
EnsemblPlants:AT4G13890.1 GeneID:827024 KEGG:ath:AT4G13890
TAIR:At4g13890 InParanoid:Q9SVM4 OMA:MAHNSAL PhylomeDB:Q9SVM4
ArrayExpress:Q9SVM4 Genevestigator:Q9SVM4 Uniprot:Q9SVM4
Length = 470
Score = 282 (104.3 bits), Expect = 7.9e-26, Sum P(2) = 7.9e-26
Identities = 61/134 (45%), Positives = 84/134 (62%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT 61
GY LV+ GT+NHL+L +L+ G+ G++VEKV E +I N+N V GD S + PGG+R+GT
Sbjct: 333 GYTLVTDGTDNHLILWDLRPLGLTGNKVEKVCELCYITLNRNAVFGDTSFLAPGGVRIGT 392
Query: 62 PALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCH 121
PA+TSRG VE+DF K+ F AV +T+ I+ E G +KDF + EI +
Sbjct: 393 PAMTSRGLVEKDFEKIGEFLHRAVTITLDIQ-EQYGKVMKDF---NKGLVNNKEIDEIKA 448
Query: 122 DVEEYAKQFPTIGF 135
DVEE+ F GF
Sbjct: 449 DVEEFTYDFDMPGF 462
Score = 33 (16.7 bits), Expect = 7.9e-26, Sum P(2) = 7.9e-26
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 1 MGYELVSGGTENH 13
MG +L SGG H
Sbjct: 125 MGLDLPSGGHITH 137
>UNIPROTKB|G4NDG3 [details] [associations]
symbol:MGG_00923 "Serine hydroxymethyltransferase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CM001235 GO:GO:0008168
GO:GO:0043581 GO:GO:0006544 GO:GO:0035999 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 RefSeq:XP_003718036.1
ProteinModelPortal:G4NDG3 SMR:G4NDG3 EnsemblFungi:MGG_00923T0
GeneID:2674480 KEGG:mgr:MGG_00923 Uniprot:G4NDG3
Length = 482
Score = 293 (108.2 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 59/133 (44%), Positives = 90/133 (67%)
Query: 1 MGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMG 60
+G++LVS GT++H+VLV+L+ +DG+RVE VLE ++IA NKN++PGD SA+ P GIR+G
Sbjct: 339 LGHKLVSDGTDSHMVLVDLRAHSLDGARVEAVLEQINIACNKNSIPGDKSALTPCGIRIG 398
Query: 61 TPALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSET--QGTKLKDFVATTQSANFQSEIAK 118
TPA+TSRGF E F +VA + D ++K+ +++ + KLKDF A S S I +
Sbjct: 399 TPAMTSRGFGVEHFQRVAKYIDESIKICKDVQAALPKEANKLKDFKAKVASGEV-SRINE 457
Query: 119 RCHDVEEYAKQFP 131
++ + + FP
Sbjct: 458 LKKEIASWCQTFP 470
>DICTYBASE|DDB_G0277947 [details] [associations]
symbol:shmt1 "serine hydroxymethyltransferase 1"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;ISS] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0006730 "one-carbon metabolic process" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
dictyBase:DDB_G0277947 GO:GO:0005829 GO:GO:0045335 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GenomeReviews:CM000152_GR EMBL:AAFI02000023
GO:GO:0006730 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HSSP:P34897
RefSeq:XP_642026.1 ProteinModelPortal:Q54Z26 SMR:Q54Z26
STRING:Q54Z26 EnsemblProtists:DDB0230072 GeneID:8621237
KEGG:ddi:DDB_G0277947 OMA:LKEVASP ProtClustDB:PTZ00094
Uniprot:Q54Z26
Length = 457
Score = 269 (99.8 bits), Expect = 2.0e-24, Sum P(2) = 2.0e-24
Identities = 57/133 (42%), Positives = 83/133 (62%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT 61
GY+LV+ GT+NHL+L +L+ K + G++ EK + +I NKN V GD +A+ PGGIR+G+
Sbjct: 328 GYKLVTNGTDNHLILWDLRPKELTGNKFEKAADIANITVNKNAVHGDTNAISPGGIRIGS 387
Query: 62 PALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCH 121
ALTSRG E DF K+A F D V ++++I+ G KL DFV N E+
Sbjct: 388 SALTSRGLKEADFEKIADFLDRIVSISLEIQGRV-GKKLVDFVV---EINKSKELLDLRK 443
Query: 122 DVEEYAKQFPTIG 134
+VEE++ +F G
Sbjct: 444 EVEEFSSKFTLPG 456
Score = 33 (16.7 bits), Expect = 2.0e-24, Sum P(2) = 2.0e-24
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 1 MGYELVSGGTENH 13
MG +L SGG H
Sbjct: 123 MGLDLPSGGHLTH 135
>GENEDB_PFALCIPARUM|PFL1720w [details] [associations]
symbol:PFL1720w "Serine
hydroxymethyltransferase" species:5833 "Plasmodium falciparum"
[GO:0005575 "cellular_component" evidence=ND] [GO:0006730
"one-carbon metabolic process" evidence=TAS] HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
Pfam:PF00464 PIRSF:PIRSF000412 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AE014188 GO:GO:0008168 GO:GO:0006730 GO:GO:0006544 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:IAKLQWA ProtClustDB:PTZ00094 HSSP:P07511 RefSeq:XP_001350750.1
ProteinModelPortal:Q8I566 EnsemblProtists:PFL1720w:mRNA
GeneID:811396 KEGG:pfa:PFL1720w EuPathDB:PlasmoDB:PF3D7_1235600
Uniprot:Q8I566
Length = 442
Score = 233 (87.1 bits), Expect = 5.7e-19, P = 5.7e-19
Identities = 51/128 (39%), Positives = 80/128 (62%)
Query: 4 ELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPA 63
+LV+ GT+NHL++V+L+ I GS++++ A++IA NKNT+P DV + P GIR+GTPA
Sbjct: 317 DLVTNGTDNHLIVVDLRKYNITGSKLQETCNAINIALNKNTIPSDVDCVSPSGIRIGTPA 376
Query: 64 LTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCHDV 123
LT+RG E+D +A A+ LT +++ + G KL DF + E+ K +V
Sbjct: 377 LTTRGCKEKDMEFIADMLLKAILLTDELQQK-YGKKLVDFKKGLVNNPKIDELKK---EV 432
Query: 124 EEYAKQFP 131
++AK P
Sbjct: 433 VQWAKNLP 440
>UNIPROTKB|Q8I566 [details] [associations]
symbol:PFL1720w "Serine hydroxymethyltransferase"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0006730 "one-carbon metabolic
process" evidence=TAS] HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00464
PIRSF:PIRSF000412 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AE014188 GO:GO:0008168 GO:GO:0006730 GO:GO:0006544 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:IAKLQWA ProtClustDB:PTZ00094 HSSP:P07511 RefSeq:XP_001350750.1
ProteinModelPortal:Q8I566 EnsemblProtists:PFL1720w:mRNA
GeneID:811396 KEGG:pfa:PFL1720w EuPathDB:PlasmoDB:PF3D7_1235600
Uniprot:Q8I566
Length = 442
Score = 233 (87.1 bits), Expect = 5.7e-19, P = 5.7e-19
Identities = 51/128 (39%), Positives = 80/128 (62%)
Query: 4 ELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPA 63
+LV+ GT+NHL++V+L+ I GS++++ A++IA NKNT+P DV + P GIR+GTPA
Sbjct: 317 DLVTNGTDNHLIVVDLRKYNITGSKLQETCNAINIALNKNTIPSDVDCVSPSGIRIGTPA 376
Query: 64 LTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCHDV 123
LT+RG E+D +A A+ LT +++ + G KL DF + E+ K +V
Sbjct: 377 LTTRGCKEKDMEFIADMLLKAILLTDELQQK-YGKKLVDFKKGLVNNPKIDELKK---EV 432
Query: 124 EEYAKQFP 131
++AK P
Sbjct: 433 VQWAKNLP 440
>TAIR|locus:2035937 [details] [associations]
symbol:SHM7 "serine hydroxymethyltransferase 7"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006544 "glycine metabolic process"
evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEP]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PROSITE:PS00096 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046686 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0008168 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 OMA:IAKLQWA HSSP:P07511
EMBL:BT002738 IPI:IPI00548548 RefSeq:NP_564473.1 UniGene:At.23145
ProteinModelPortal:Q84WV0 STRING:Q84WV0 PaxDb:Q84WV0 PRIDE:Q84WV0
EnsemblPlants:AT1G36370.1 GeneID:840543 KEGG:ath:AT1G36370
TAIR:At1g36370 InParanoid:Q84WV0 PhylomeDB:Q84WV0
ProtClustDB:PLN02271 ArrayExpress:Q84WV0 Genevestigator:Q84WV0
Uniprot:Q84WV0
Length = 598
Score = 230 (86.0 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 52/126 (41%), Positives = 76/126 (60%)
Query: 5 LVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPAL 64
LV+GGT+NHL+L +L G+ G EKV E HI NK + GD + PGG+R+GTPA+
Sbjct: 467 LVTGGTDNHLLLWDLTPMGLTGKVYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAM 526
Query: 65 TSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCHDVE 124
T+RG +E DF +A F A ++T ++ E G K+FV +S +IA+ + VE
Sbjct: 527 TTRGCIESDFETMADFLIKAAQITSALQRE-HGKSHKEFV---KSLCTNKDIAELRNRVE 582
Query: 125 EYAKQF 130
+A Q+
Sbjct: 583 AFALQY 588
>UNIPROTKB|A8MYA6 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005634 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
EMBL:AC127537 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 HOVERGEN:HBG002807 HGNC:HGNC:10850
ChiTaRS:SHMT1 EMBL:AL353997 IPI:IPI00793862
ProteinModelPortal:A8MYA6 SMR:A8MYA6 STRING:A8MYA6
Ensembl:ENST00000395685 ArrayExpress:A8MYA6 Bgee:A8MYA6
Uniprot:A8MYA6
Length = 446
Score = 169 (64.5 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 30/47 (63%), Positives = 40/47 (85%)
Query: 1 MGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPG 47
+GY++V+GG++NHL+LV+L++KG DG R EKVLEA IA NKNT PG
Sbjct: 345 LGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPG 391
Score = 63 (27.2 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 85 VKLTVKIKSETQGTK--LKDFVATTQSANFQSEIAKRCHDVEEYAKQFPTIG 134
++LT++I+S+T G + LK+F +Q+ + +VE +A FP G
Sbjct: 392 IELTLQIQSDT-GVRATLKEFKERLAGDKYQAAVQALREEVESFASLFPLPG 442
>TIGR_CMR|CBU_1419 [details] [associations]
symbol:CBU_1419 "serine hydroxymethyltransferase"
species:227377 "Coxiella burnetii RSA 493" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:NP_820403.1 ProteinModelPortal:Q83BT3 SMR:Q83BT3
PRIDE:Q83BT3 GeneID:1209325 KEGG:cbu:CBU_1419 PATRIC:17931591
OMA:SKELTGW BioCyc:CBUR227377:GJ7S-1406-MONOMER Uniprot:Q83BT3
Length = 419
Score = 208 (78.3 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 40/80 (50%), Positives = 57/80 (71%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMG 60
GY +VSGGT+NHL LV+L +K I G E L +I NKNTVPG+ S V G+R+G
Sbjct: 305 GYTIVSGGTQNHLFLVSLLDKNISGKEAEAALGRANITVNKNTVPGETRSPFVTSGLRIG 364
Query: 61 TPALTSRGFVEEDFAKVAYF 80
TPA+T+RGF E++ +++A++
Sbjct: 365 TPAITTRGFKEKEASQLAHW 384
>UNIPROTKB|O53441 [details] [associations]
symbol:glyA1 "Serine hydroxymethyltransferase 1"
species:1773 "Mycobacterium tuberculosis" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IDA] [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006544 "glycine metabolic process" evidence=IDA] [GO:0006563
"L-serine metabolic process" evidence=IDA] [GO:0030170 "pyridoxal
phosphate binding" evidence=IDA] [GO:0042783 "active evasion of
host immune response" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=IPI] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005886
GO:GO:0005737 GO:GO:0005618 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:BX842575 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006544 GO:GO:0035999 GO:GO:0042783
GO:GO:0006545 eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 PIR:C70896
RefSeq:NP_335569.1 RefSeq:YP_006514462.1 PDB:1LXB PDB:3H7F
PDBsum:1LXB PDBsum:3H7F ProteinModelPortal:O53441 SMR:O53441
PRIDE:O53441 EnsemblBacteria:EBMYCT00000001613
EnsemblBacteria:EBMYCT00000071670 GeneID:13319665 GeneID:924979
KEGG:mtc:MT1125 KEGG:mtu:Rv1093 KEGG:mtv:RVBD_1093 PATRIC:18124236
TubercuList:Rv1093 OMA:PETHRID ProtClustDB:PRK00011 BRENDA:2.1.2.1
EvolutionaryTrace:O53441 Uniprot:O53441
Length = 426
Score = 186 (70.5 bits), Expect = 7.5e-16, Sum P(2) = 7.5e-16
Identities = 38/78 (48%), Positives = 52/78 (66%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSA-MVPGGIRMG 60
G +VSGGT+ HLVLV+L++ +DG E +L V I N+N VP D MV G+R+G
Sbjct: 306 GVSVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIG 365
Query: 61 TPALTSRGFVEEDFAKVA 78
TPAL +RGF + +F +VA
Sbjct: 366 TPALATRGFGDTEFTEVA 383
Score = 39 (18.8 bits), Expect = 7.5e-16, Sum P(2) = 7.5e-16
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 94 ETQGTKLKDFVATTQSANFQSEIAKRCHDVEEYAKQFPTI-GFEK 137
+T+ T++ D +AT + +++ A+ FP G E+
Sbjct: 376 DTEFTEVADIIATALATGSSVDVSALKDRATRLARAFPLYDGLEE 420
>TAIR|locus:2030581 [details] [associations]
symbol:SHM6 "serine hydroxymethyltransferase 6"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0006544
"glycine metabolic process" evidence=IEA;ISS] [GO:0006563 "L-serine
metabolic process" evidence=IEA;ISS] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0008168 EMBL:AC069252 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HSSP:P07511
ProtClustDB:PLN02271 EMBL:AY125514 EMBL:BT004532 IPI:IPI00534805
RefSeq:NP_173621.1 UniGene:At.41627 ProteinModelPortal:Q9LM59
SMR:Q9LM59 STRING:Q9LM59 PaxDb:Q9LM59 PRIDE:Q9LM59
EnsemblPlants:AT1G22020.1 GeneID:838807 KEGG:ath:AT1G22020
TAIR:At1g22020 InParanoid:Q9LM59 OMA:IFGAIGK PhylomeDB:Q9LM59
Genevestigator:Q9LM59 Uniprot:Q9LM59
Length = 599
Score = 197 (74.4 bits), Expect = 9.8e-15, P = 9.8e-15
Identities = 48/133 (36%), Positives = 73/133 (54%)
Query: 4 ELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPA 63
+L++GGT+NHL+L +L G+ G EKV E HI NK + + + PGG+R+G+PA
Sbjct: 470 KLITGGTDNHLLLWDLTPLGLTGKVYEKVCEMCHITVNKVAIFSENGVISPGGVRIGSPA 529
Query: 64 LTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCHDV 123
+TSRG +E +F +A F A ++ + E G K+ +S EIA + V
Sbjct: 530 MTSRGCLEPEFETMADFLYRAAQIASAAQRE-HGKLQKE---PLKSIYHCKEIADLRNQV 585
Query: 124 EEYAKQFPTIGFE 136
E +A QF F+
Sbjct: 586 EAFATQFAMPAFD 598
>UNIPROTKB|Q9KTG1 [details] [associations]
symbol:glyA1 "Serine hydroxymethyltransferase 1"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006545 "glycine biosynthetic process"
evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006730 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 PIR:H82258
RefSeq:NP_230588.2 ProteinModelPortal:Q9KTG1 SMR:Q9KTG1
PRIDE:Q9KTG1 DNASU:2614161 GeneID:2614161 KEGG:vch:VC0941
PATRIC:20080986 OMA:GKIDYED Uniprot:Q9KTG1
Length = 416
Score = 193 (73.0 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 40/78 (51%), Positives = 51/78 (65%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMG 60
GY++VS TENHL LV+L +K I G + L A +I NKN+VP D S V GIR+G
Sbjct: 305 GYKIVSNSTENHLFLVDLIDKNITGKEADAALGAANITVNKNSVPNDPRSPFVTSGIRVG 364
Query: 61 TPALTSRGFVEEDFAKVA 78
TPA+T RGF E+D +A
Sbjct: 365 TPAITRRGFTEQDAKDLA 382
>TIGR_CMR|VC_0941 [details] [associations]
symbol:VC_0941 "serine hydroxymethyltransferase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006730 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 PIR:H82258
RefSeq:NP_230588.2 ProteinModelPortal:Q9KTG1 SMR:Q9KTG1
PRIDE:Q9KTG1 DNASU:2614161 GeneID:2614161 KEGG:vch:VC0941
PATRIC:20080986 OMA:GKIDYED Uniprot:Q9KTG1
Length = 416
Score = 193 (73.0 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 40/78 (51%), Positives = 51/78 (65%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMG 60
GY++VS TENHL LV+L +K I G + L A +I NKN+VP D S V GIR+G
Sbjct: 305 GYKIVSNSTENHLFLVDLIDKNITGKEADAALGAANITVNKNSVPNDPRSPFVTSGIRVG 364
Query: 61 TPALTSRGFVEEDFAKVA 78
TPA+T RGF E+D +A
Sbjct: 365 TPAITRRGFTEQDAKDLA 382
>TIGR_CMR|CHY_2557 [details] [associations]
symbol:CHY_2557 "serine hydroxymethyltransferase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006544 "glycine metabolic process" evidence=ISS]
[GO:0006553 "lysine metabolic process" evidence=ISS] [GO:0006563
"L-serine metabolic process" evidence=ISS] [GO:0006566 "threonine
metabolic process" evidence=ISS] [GO:0006730 "one-carbon metabolic
process" evidence=ISS] [GO:0006760 "folic acid-containing compound
metabolic process" evidence=ISS] [GO:0015947 "methane metabolic
process" evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
UniPathway:UPA00288 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 RefSeq:YP_361350.1 ProteinModelPortal:Q3A934
SMR:Q3A934 STRING:Q3A934 GeneID:3728195 KEGG:chy:CHY_2557
PATRIC:21278163 HOGENOM:HOG000239403 OMA:GLLSDPM
BioCyc:CHYD246194:GJCN-2556-MONOMER Uniprot:Q3A934
Length = 421
Score = 192 (72.6 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 38/86 (44%), Positives = 57/86 (66%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMG 60
G LVSGGT+NHL+LV+++ G+ G R E++L+ + + NKN +P D S V GIR+G
Sbjct: 304 GLRLVSGGTDNHLMLVDVRPVGLTGKRAEQLLDEIGVTVNKNAIPYDPESPNVTSGIRIG 363
Query: 61 TPALTSRGFVEEDFAKVAYFFDAAVK 86
TPA+T+RG E + A++A +K
Sbjct: 364 TPAVTTRGMKEGEMAEIAEIIALVLK 389
>UNIPROTKB|Q9KMP4 [details] [associations]
symbol:glyA2 "Serine hydroxymethyltransferase 2"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006545 "glycine biosynthetic process"
evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0006730 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 PIR:A82480 RefSeq:NP_232675.1
ProteinModelPortal:Q9KMP4 SMR:Q9KMP4 DNASU:2612058 GeneID:2612058
KEGG:vch:VCA0278 PATRIC:20085121 OMA:MILTNHE ProtClustDB:PRK13034
Uniprot:Q9KMP4
Length = 435
Score = 192 (72.6 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 38/74 (51%), Positives = 53/74 (71%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSA-MVPGGIRMG 60
G ++V+GGT+ HL+LV+L+ KG+ G++VE+ LE I NKN +P D M+ GIR+G
Sbjct: 319 GCDIVTGGTDTHLMLVDLRPKGLKGNQVEQALERAGITCNKNGIPFDEEKPMITSGIRLG 378
Query: 61 TPALTSRGFVEEDF 74
TPA TSRGF E+F
Sbjct: 379 TPAGTSRGFGREEF 392
>TIGR_CMR|VC_A0278 [details] [associations]
symbol:VC_A0278 "serine hydroxymethyltransferase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0006730 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 PIR:A82480 RefSeq:NP_232675.1
ProteinModelPortal:Q9KMP4 SMR:Q9KMP4 DNASU:2612058 GeneID:2612058
KEGG:vch:VCA0278 PATRIC:20085121 OMA:MILTNHE ProtClustDB:PRK13034
Uniprot:Q9KMP4
Length = 435
Score = 192 (72.6 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 38/74 (51%), Positives = 53/74 (71%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSA-MVPGGIRMG 60
G ++V+GGT+ HL+LV+L+ KG+ G++VE+ LE I NKN +P D M+ GIR+G
Sbjct: 319 GCDIVTGGTDTHLMLVDLRPKGLKGNQVEQALERAGITCNKNGIPFDEEKPMITSGIRLG 378
Query: 61 TPALTSRGFVEEDF 74
TPA TSRGF E+F
Sbjct: 379 TPAGTSRGFGREEF 392
>TIGR_CMR|CPS_2477 [details] [associations]
symbol:CPS_2477 "serine hydroxymethyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_269193.1 ProteinModelPortal:Q481S6 SMR:Q481S6
STRING:Q481S6 PRIDE:Q481S6 GeneID:3520009 KEGG:cps:CPS_2477
PATRIC:21468023 BioCyc:CPSY167879:GI48-2540-MONOMER Uniprot:Q481S6
Length = 417
Score = 191 (72.3 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 41/83 (49%), Positives = 54/83 (65%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMG 60
GY +VSGGT+NHL L++L +KGI G + L +I NKN+VP D S V G+R+G
Sbjct: 306 GYNVVSGGTDNHLFLLDLIDKGITGKDADAALGRANITVNKNSVPNDPQSPFVTSGLRIG 365
Query: 61 TPALTSRGF-VEEDFAKVAYFFD 82
TPA+TSRGF +EE A + D
Sbjct: 366 TPAITSRGFGLEEAAALTGWICD 388
>TIGR_CMR|CPS_4031 [details] [associations]
symbol:CPS_4031 "serine hydroxymethyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_270689.1 ProteinModelPortal:Q47WY2 SMR:Q47WY2
STRING:Q47WY2 GeneID:3519081 KEGG:cps:CPS_4031 PATRIC:21470941
OMA:VKINAQV BioCyc:CPSY167879:GI48-4044-MONOMER Uniprot:Q47WY2
Length = 417
Score = 191 (72.3 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 41/83 (49%), Positives = 54/83 (65%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMG 60
GY +VSGGT+NHL L++L +KGI G + L +I NKN+VP D S V G+R+G
Sbjct: 306 GYNVVSGGTDNHLFLLDLIDKGITGKDADAALGRANITVNKNSVPNDPQSPFVTSGLRIG 365
Query: 61 TPALTSRGF-VEEDFAKVAYFFD 82
TPA+TSRGF +EE A + D
Sbjct: 366 TPAITSRGFGLEEAAALTGWICD 388
>TIGR_CMR|BA_5558 [details] [associations]
symbol:BA_5558 "serine hydroxymethyltransferase"
species:198094 "Bacillus anthracis str. Ames" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 RefSeq:NP_847716.1
RefSeq:YP_022227.1 RefSeq:YP_031404.1 ProteinModelPortal:Q81JY4
SMR:Q81JY4 PRIDE:Q81JY4 DNASU:1085246
EnsemblBacteria:EBBACT00000011325 EnsemblBacteria:EBBACT00000016380
EnsemblBacteria:EBBACT00000022066 GeneID:1085246 GeneID:2820074
GeneID:2851919 KEGG:ban:BA_5558 KEGG:bar:GBAA_5558 KEGG:bat:BAS5165
HOGENOM:HOG000239405 OMA:CREAHAK
BioCyc:BANT260799:GJAJ-5240-MONOMER
BioCyc:BANT261594:GJ7F-5419-MONOMER Uniprot:Q81JY4
Length = 413
Score = 189 (71.6 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 39/78 (50%), Positives = 53/78 (67%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMG 60
G LVSGGT+NHL+L++++N I G E VL+ V I NKNT+P + S V G+R+G
Sbjct: 300 GLTLVSGGTDNHLILIDVRNLEITGKVAEHVLDEVGITVNKNTIPFETASPFVTSGVRIG 359
Query: 61 TPALTSRGFVEEDFAKVA 78
T A+TSRGF ED ++A
Sbjct: 360 TAAVTSRGFGLEDMDEIA 377
>UNIPROTKB|P0A825 [details] [associations]
symbol:glyA species:83333 "Escherichia coli K-12"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;IDA;IMP] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IMP] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006730
"one-carbon metabolic process" evidence=IEA] [GO:0006565 "L-serine
catabolic process" evidence=IDA] [GO:0019264 "glycine biosynthetic
process from serine" evidence=IDA;IMP] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA;IDA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005829
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0016020 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0008270 GO:GO:0035999 GO:GO:0006546 GO:GO:0006565
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 ProtClustDB:PRK00011 OMA:GKIDYED EMBL:V00283
EMBL:J01620 PIR:A00559 RefSeq:NP_417046.1 RefSeq:YP_490779.1
PDB:1DFO PDB:1EQB PDB:3G8M PDBsum:1DFO PDBsum:1EQB PDBsum:3G8M
ProteinModelPortal:P0A825 SMR:P0A825 DIP:DIP-36205N IntAct:P0A825
MINT:MINT-7293373 SWISS-2DPAGE:P0A825 PaxDb:P0A825 PRIDE:P0A825
EnsemblBacteria:EBESCT00000003405 EnsemblBacteria:EBESCT00000017377
GeneID:12932320 GeneID:947022 KEGG:ecj:Y75_p2504 KEGG:eco:b2551
PATRIC:32120501 EchoBASE:EB0403 EcoGene:EG10408
BioCyc:EcoCyc:GLYOHMETRANS-MONOMER BioCyc:ECOL316407:JW2535-MONOMER
BioCyc:MetaCyc:GLYOHMETRANS-MONOMER EvolutionaryTrace:P0A825
Genevestigator:P0A825 GO:GO:0019264 Uniprot:P0A825
Length = 417
Score = 188 (71.2 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 38/78 (48%), Positives = 52/78 (66%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMG 60
GY++VSGGT+NHL LV+L +K + G + L +I NKN+VP D S V GIR+G
Sbjct: 306 GYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVG 365
Query: 61 TPALTSRGFVEEDFAKVA 78
TPA+T RGF E + ++A
Sbjct: 366 TPAITRRGFKEAEAKELA 383
>TIGR_CMR|CPS_0728 [details] [associations]
symbol:CPS_0728 "serine hydroxymethyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0035999 GO:GO:0006545
RefSeq:YP_267478.1 ProteinModelPortal:Q488N6 SMR:Q488N6
STRING:Q488N6 PRIDE:Q488N6 GeneID:3519747 KEGG:cps:CPS_0728
PATRIC:21464771 eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600
OMA:AICAKFP BioCyc:CPSY167879:GI48-815-MONOMER GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 Uniprot:Q488N6
Length = 419
Score = 186 (70.5 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 39/83 (46%), Positives = 53/83 (63%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMG 60
GY++VS GT+NHL+L++L +K I G + L HI NKN+VP D S V G+R+G
Sbjct: 307 GYKVVSNGTQNHLLLLDLIDKDITGKDADAALGKAHITVNKNSVPNDPRSPFVTSGLRLG 366
Query: 61 TPALTSRGF-VEEDFAKVAYFFD 82
TPA+T RGF +EE A + D
Sbjct: 367 TPAITRRGFGIEETKALTGWICD 389
>UNIPROTKB|O53615 [details] [associations]
symbol:glyA2 "Serine hydroxymethyltransferase 2"
species:1773 "Mycobacterium tuberculosis" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006544 "glycine metabolic
process" evidence=IDA] [GO:0006563 "L-serine metabolic process"
evidence=IDA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IPI] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005886 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842572 GO:GO:0006544 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011 BRENDA:2.1.2.1
PIR:G70848 RefSeq:NP_214584.1 RefSeq:NP_334486.1
RefSeq:YP_006513385.1 ProteinModelPortal:O53615 SMR:O53615
PRIDE:O53615 EnsemblBacteria:EBMYCT00000002193
EnsemblBacteria:EBMYCT00000071276 GeneID:13316049 GeneID:886983
GeneID:922815 KEGG:mtc:MT0076 KEGG:mtu:Rv0070c KEGG:mtv:RVBD_0070c
PATRIC:18121891 TubercuList:Rv0070c OMA:DYLIDMD Uniprot:O53615
Length = 425
Score = 185 (70.2 bits), Expect = 9.6e-14, P = 9.6e-14
Identities = 40/88 (45%), Positives = 55/88 (62%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSA-MVPGGIRMG 60
G +++GGT+ HLVLV+L++ +DG + E L AV I N+N VP D M+ G+R+G
Sbjct: 310 GIAVLTGGTDVHLVLVDLRDAELDGQQAEDRLAAVDITVNRNAVPFDPRPPMITSGLRIG 369
Query: 61 TPALTSRGFVEEDFAKVAYFFDAAVKLT 88
TPAL +RGF DF VA AA+ T
Sbjct: 370 TPALAARGFSHNDFRAVADLIAAALTAT 397
>TIGR_CMR|GSU_1607 [details] [associations]
symbol:GSU_1607 "serine hydroxymethyltransferase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 HOGENOM:HOG000239405
RefSeq:NP_952658.1 ProteinModelPortal:Q74CR5 SMR:Q74CR5
PRIDE:Q74CR5 GeneID:2685603 KEGG:gsu:GSU1607 PATRIC:22026061
OMA:IAKLQWA BioCyc:GSUL243231:GH27-1559-MONOMER Uniprot:Q74CR5
Length = 415
Score = 182 (69.1 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 40/85 (47%), Positives = 51/85 (60%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMG 60
G+ LVSGGT+NHL+LVNL + G E+ L+ I NKNTVP + S V G R+G
Sbjct: 300 GFRLVSGGTDNHLMLVNLTGTELTGKVAEESLDKAGITVNKNTVPFETRSPFVTSGFRIG 359
Query: 61 TPALTSRGFVEEDFAKVAYFFDAAV 85
TPA T+ G E + A VA F A+
Sbjct: 360 TPAATTHGLKEAEMADVAGFIAEAL 384
>TIGR_CMR|SPO_1572 [details] [associations]
symbol:SPO_1572 "serine hydroxymethyltransferase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_166813.1 RefSeq:YP_168148.1 ProteinModelPortal:Q5LPA8
SMR:Q5LPA8 GeneID:3193885 GeneID:3194742 KEGG:sil:SPO1572
KEGG:sil:SPO2940 PATRIC:23376465 OMA:QIDFARM Uniprot:Q5LPA8
Length = 431
Score = 182 (69.1 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 37/78 (47%), Positives = 51/78 (65%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSA-MVPGGIRMG 60
G + V+ GT+ H+VLV+L+ KG+ G+ EK L HI NKN VP D V GIR+G
Sbjct: 312 GLDTVTHGTDTHVVLVDLRPKGVKGNATEKALGRAHITCNKNGVPFDPEKPTVTSGIRLG 371
Query: 61 TPALTSRGFVEEDFAKVA 78
+PA T+RGF E +F ++A
Sbjct: 372 SPAGTTRGFAETEFRQIA 389
>TIGR_CMR|SPO_2940 [details] [associations]
symbol:SPO_2940 "serine hydroxymethyltransferase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_166813.1 RefSeq:YP_168148.1 ProteinModelPortal:Q5LPA8
SMR:Q5LPA8 GeneID:3193885 GeneID:3194742 KEGG:sil:SPO1572
KEGG:sil:SPO2940 PATRIC:23376465 OMA:QIDFARM Uniprot:Q5LPA8
Length = 431
Score = 182 (69.1 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 37/78 (47%), Positives = 51/78 (65%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSA-MVPGGIRMG 60
G + V+ GT+ H+VLV+L+ KG+ G+ EK L HI NKN VP D V GIR+G
Sbjct: 312 GLDTVTHGTDTHVVLVDLRPKGVKGNATEKALGRAHITCNKNGVPFDPEKPTVTSGIRLG 371
Query: 61 TPALTSRGFVEEDFAKVA 78
+PA T+RGF E +F ++A
Sbjct: 372 SPAGTTRGFAETEFRQIA 389
>TIGR_CMR|SO_3471 [details] [associations]
symbol:SO_3471 "serine hydroxymethyltransferase"
species:211586 "Shewanella oneidensis MR-1" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 OMA:AICAKFP GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 HOGENOM:HOG000239403
RefSeq:NP_719020.1 ProteinModelPortal:Q8EBN8 SMR:Q8EBN8
GeneID:1171147 KEGG:son:SO_3471 PATRIC:23526638 Uniprot:Q8EBN8
Length = 417
Score = 181 (68.8 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 35/73 (47%), Positives = 49/73 (67%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMG 60
GY++VSGGT NHL+LV+L + + G + L + +I NKN+VP D S V G+R+G
Sbjct: 306 GYKIVSGGTSNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTSGVRIG 365
Query: 61 TPALTSRGFVEED 73
TPA+T RGF E +
Sbjct: 366 TPAITRRGFKEAE 378
>TIGR_CMR|CJE_0451 [details] [associations]
symbol:CJE_0451 "serine hydroxymethyltransferase"
species:195099 "Campylobacter jejuni RM1221" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK13034 HOGENOM:HOG000239405
RefSeq:YP_178470.1 ProteinModelPortal:Q5HW65 SMR:Q5HW65
STRING:Q5HW65 PRIDE:Q5HW65 GeneID:3231213 KEGG:cjr:CJE0451
PATRIC:20042602 OMA:ALATWIC BioCyc:CJEJ195099:GJC0-456-MONOMER
Uniprot:Q5HW65
Length = 414
Score = 178 (67.7 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 37/82 (45%), Positives = 54/82 (65%)
Query: 3 YELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGT 61
++LVS GT+NHLVL++ ++ G + L I ANKNTVPG++ S + G+R+GT
Sbjct: 300 FKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGT 359
Query: 62 PALTSRGFVEEDFAKVA-YFFD 82
PALT+RGF E++ V+ Y D
Sbjct: 360 PALTARGFKEKEMEIVSNYIAD 381
>TIGR_CMR|APH_0154 [details] [associations]
symbol:APH_0154 "serine hydroxymethyltransferase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006544
"glycine metabolic process" evidence=ISS] [GO:0006730 "one-carbon
metabolic process" evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
UniPathway:UPA00288 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_504778.1 HSSP:P34897 ProteinModelPortal:Q2GLH3 SMR:Q2GLH3
STRING:Q2GLH3 GeneID:3930419 KEGG:aph:APH_0154 PATRIC:20948876
OMA:FKAYAHQ BioCyc:APHA212042:GHPM-189-MONOMER Uniprot:Q2GLH3
Length = 425
Score = 175 (66.7 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 36/77 (46%), Positives = 50/77 (64%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSA-MVPGGIRMG 60
G ++V+GGT++H+V+V+L++KG+ G V LE I NKN VP D V GIR+G
Sbjct: 307 GLDVVTGGTDSHMVVVDLRSKGLTGRDVSSSLERAGIVCNKNAVPFDTEKPWVTSGIRLG 366
Query: 61 TPALTSRGFVEEDFAKV 77
A TSRG V +DF K+
Sbjct: 367 AAAETSRGLVVKDFEKI 383
>TIGR_CMR|CPS_3844 [details] [associations]
symbol:CPS_3844 "serine hydroxymethyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK13034
RefSeq:YP_270506.1 ProteinModelPortal:Q47XG4 SMR:Q47XG4
STRING:Q47XG4 GeneID:3518659 KEGG:cps:CPS_3844 PATRIC:21470595
OMA:LQSRDPV BioCyc:CPSY167879:GI48-3861-MONOMER Uniprot:Q47XG4
Length = 431
Score = 175 (66.7 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 36/74 (48%), Positives = 50/74 (67%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSA-MVPGGIRMG 60
G ++V+ GT+ HL+LV+L+ KG+ G+ E+ LE I NKN +P D MV GIR+G
Sbjct: 315 GCDIVTDGTDTHLMLVDLRPKGLKGNTTEESLERAGITCNKNGIPFDSEKPMVTSGIRLG 374
Query: 61 TPALTSRGFVEEDF 74
TPA TSRGF ++F
Sbjct: 375 TPAGTSRGFGNDEF 388
>TIGR_CMR|DET_0436 [details] [associations]
symbol:DET_0436 "Serine hydroxymethyltransferase"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0006545 "glycine biosynthetic process" evidence=ISS]
[GO:0006730 "one-carbon metabolic process" evidence=ISS]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_181180.1 ProteinModelPortal:Q3Z9B9 SMR:Q3Z9B9
STRING:Q3Z9B9 PRIDE:Q3Z9B9 GeneID:3230231 KEGG:det:DET0436
PATRIC:21607941 OMA:ERFRAIC BioCyc:DETH243164:GJNF-436-MONOMER
Uniprot:Q3Z9B9
Length = 415
Score = 172 (65.6 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 37/71 (52%), Positives = 47/71 (66%)
Query: 1 MGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVP--GDVSAMVPGGIR 58
+G LVSGGT+NHLVLV+L G++G + L I N+NTVP + +A VP GIR
Sbjct: 299 LGLRLVSGGTDNHLVLVDLSPIGVNGYDAQLALRRAGIVINRNTVPFAENQTANVPAGIR 358
Query: 59 MGTPALTSRGF 69
+G PA TSRGF
Sbjct: 359 LGCPAATSRGF 369
>TIGR_CMR|ECH_0311 [details] [associations]
symbol:ECH_0311 "serine hydroxymethyltransferase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0006545 "glycine biosynthetic process" evidence=ISS]
[GO:0006730 "one-carbon metabolic process" evidence=ISS]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011 HSSP:P34897
RefSeq:YP_507132.1 ProteinModelPortal:Q2GHF1 SMR:Q2GHF1
STRING:Q2GHF1 PRIDE:Q2GHF1 GeneID:3927190 KEGG:ech:ECH_0311
PATRIC:20576127 OMA:LELTHQF BioCyc:ECHA205920:GJNR-311-MONOMER
Uniprot:Q2GHF1
Length = 420
Score = 152 (58.6 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSA-MVPGGIRMG 60
G +LV+GGT++H+V+++L++K + G LE + I NKN +P D V G+R G
Sbjct: 307 GLDLVTGGTDSHMVVLDLRSKSVTGKDAVLALEKLGIICNKNAIPFDPEKPFVTSGLRFG 366
Query: 61 TPALTSRGFVEEDFAKV 77
+ A TSRG E +F ++
Sbjct: 367 SAAETSRGLQESEFREI 383
>TIGR_CMR|NSE_0218 [details] [associations]
symbol:NSE_0218 "serine hydroxymethyltransferase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0006545 "glycine biosynthetic process" evidence=ISS]
[GO:0006730 "one-carbon metabolic process" evidence=ISS]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 HSSP:P34897 RefSeq:YP_506113.1
ProteinModelPortal:Q2GEI3 SMR:Q2GEI3 STRING:Q2GEI3 PRIDE:Q2GEI3
GeneID:3932003 KEGG:nse:NSE_0218 PATRIC:22680535 OMA:INEVIQG
ProtClustDB:CLSK2528038 BioCyc:NSEN222891:GHFU-249-MONOMER
Uniprot:Q2GEI3
Length = 419
Score = 150 (57.9 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 37/112 (33%), Positives = 59/112 (52%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSA-MVPGGIRMG 60
G++++SGGT+ H+V+++L+ + G+ LE+ I NKN +P D V G+R G
Sbjct: 310 GFDVLSGGTDTHIVMIDLRKLNLKGNVSALKLESAGIICNKNAIPFDEEKPFVTSGLRFG 369
Query: 61 TPALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVATTQSANF 112
+PA T+RG E +FA + A L KI ++ + D T NF
Sbjct: 370 SPAETTRGMRELEFAHIGGLI--ADLLEEKISTDNAAEMVLDL---TSKFNF 416
>UNIPROTKB|G3V2Y4 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase" species:9606
"Homo sapiens" [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005758 "mitochondrial intermembrane space"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0006564 "L-serine biosynthetic process" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0008732 "L-allo-threonine aldolase activity"
evidence=IEA] [GO:0016597 "amino acid binding" evidence=IEA]
[GO:0019264 "glycine biosynthetic process from serine"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0051289 "protein homotetramerization" evidence=IEA] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0005743 GO:GO:0005758
GO:GO:0005759 GO:GO:0008284 GO:GO:0016597 GO:GO:0051289
GO:GO:0035999 GO:GO:0006564 GO:GO:0008732 GO:GO:0004372
PANTHER:PTHR11680 GO:GO:0019264 EMBL:AC137834 HGNC:HGNC:10852
ChiTaRS:SHMT2 ProteinModelPortal:G3V2Y4 SMR:G3V2Y4
Ensembl:ENST00000555634 ArrayExpress:G3V2Y4 Bgee:G3V2Y4
Uniprot:G3V2Y4
Length = 234
Score = 110 (43.8 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 20/27 (74%), Positives = 25/27 (92%)
Query: 2 GYELVSGGTENHLVLVNLKNKGIDGSR 28
GY LVSGGT+NHLVLV+L+ KG+DG+R
Sbjct: 208 GYSLVSGGTDNHLVLVDLRPKGLDGAR 234
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.362 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 144 144 0.00091 102 3 11 23 0.49 31
30 0.48 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 70
No. of states in DFA: 544 (58 KB)
Total size of DFA: 115 KB (2076 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.52u 0.08s 14.60t Elapsed: 00:00:01
Total cpu time: 14.53u 0.08s 14.61t Elapsed: 00:00:01
Start: Fri May 10 23:23:27 2013 End: Fri May 10 23:23:28 2013