Query 032257
Match_columns 144
No_of_seqs 119 out of 1069
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 19:02:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032257.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032257hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ou5_A Serine hydroxymethyltra 100.0 1.2E-42 4.3E-47 303.9 14.1 135 1-137 354-489 (490)
2 2a7v_A Serine hydroxymethyltra 100.0 8.8E-29 3E-33 215.8 14.5 135 1-137 354-489 (490)
3 1rv3_A Serine hydroxymethyltra 99.9 1.2E-21 4.1E-26 168.0 14.5 135 2-136 345-481 (483)
4 3h7f_A Serine hydroxymethyltra 99.7 5.9E-18 2E-22 142.7 11.2 117 2-141 327-445 (447)
5 3n0l_A Serine hydroxymethyltra 99.5 9.8E-14 3.4E-18 113.2 13.4 111 2-134 302-413 (417)
6 3gbx_A Serine hydroxymethyltra 99.4 1.6E-12 5.5E-17 105.9 13.2 111 2-134 309-420 (420)
7 3ecd_A Serine hydroxymethyltra 99.3 2.2E-11 7.6E-16 99.3 12.8 115 2-133 310-425 (425)
8 2dkj_A Serine hydroxymethyltra 98.5 1.8E-06 6.2E-11 69.8 11.7 106 2-133 301-407 (407)
9 2vi8_A Serine hydroxymethyltra 98.3 6.8E-06 2.3E-10 66.4 11.1 104 2-127 300-404 (405)
10 1iug_A Putative aspartate amin 92.6 0.41 1.4E-05 37.1 7.4 75 2-86 272-346 (352)
11 3get_A Histidinol-phosphate am 92.2 0.65 2.2E-05 36.5 8.2 67 2-85 298-364 (365)
12 3g0t_A Putative aminotransfera 92.0 0.5 1.7E-05 38.1 7.5 66 10-85 369-434 (437)
13 3hbx_A GAD 1, glutamate decarb 92.0 0.76 2.6E-05 38.9 8.9 81 2-88 363-444 (502)
14 3ly1_A Putative histidinol-pho 92.0 0.79 2.7E-05 35.7 8.4 60 11-86 291-350 (354)
15 2bkw_A Alanine-glyoxylate amin 91.1 0.74 2.5E-05 36.1 7.4 67 11-85 315-381 (385)
16 3ffh_A Histidinol-phosphate am 90.8 1.1 3.6E-05 35.2 8.1 66 2-84 297-362 (363)
17 2gb3_A Aspartate aminotransfer 90.6 1.2 4.2E-05 35.8 8.5 77 2-86 318-400 (409)
18 3cq5_A Histidinol-phosphate am 90.4 1.3 4.4E-05 35.0 8.4 65 2-86 302-366 (369)
19 1jg8_A L-ALLO-threonine aldola 89.2 1.3 4.3E-05 34.4 7.3 63 10-85 281-343 (347)
20 3nra_A Aspartate aminotransfer 89.0 1.4 4.6E-05 35.0 7.4 66 12-86 337-403 (407)
21 2zyj_A Alpha-aminodipate amino 88.6 2.9 0.0001 33.2 9.2 77 2-86 315-391 (397)
22 3if2_A Aminotransferase; YP_26 88.3 2.8 9.7E-05 33.8 9.0 70 11-86 364-438 (444)
23 2vyc_A Biodegradative arginine 88.2 0.7 2.4E-05 41.8 5.8 72 1-85 519-602 (755)
24 3kax_A Aminotransferase, class 88.1 2.8 9.7E-05 32.7 8.7 74 2-85 308-382 (383)
25 3dzz_A Putative pyridoxal 5'-p 88.1 1.8 6E-05 34.0 7.5 75 2-86 312-387 (391)
26 3g7q_A Valine-pyruvate aminotr 87.9 2.4 8.3E-05 33.7 8.3 70 11-86 338-411 (417)
27 1m32_A 2-aminoethylphosphonate 87.2 2 6.9E-05 33.1 7.2 64 12-85 298-362 (366)
28 1fc4_A 2-amino-3-ketobutyrate 87.1 1 3.4E-05 35.9 5.5 76 2-86 320-395 (401)
29 2yrr_A Aminotransferase, class 87.0 3.2 0.00011 31.8 8.2 75 2-86 275-351 (353)
30 3zrp_A Serine-pyruvate aminotr 87.0 3.1 0.00011 32.3 8.2 64 12-87 299-362 (384)
31 1gd9_A Aspartate aminotransfer 86.9 1.5 5E-05 34.7 6.4 75 2-86 309-384 (389)
32 3fdb_A Beta C-S lyase, putativ 86.8 1.7 5.7E-05 34.1 6.6 75 2-86 300-374 (377)
33 3h14_A Aminotransferase, class 86.6 2.7 9.3E-05 33.2 7.8 72 7-86 308-380 (391)
34 2po3_A 4-dehydrase; external a 86.6 3.4 0.00012 33.3 8.6 71 13-87 297-385 (424)
35 2fyf_A PSAT, phosphoserine ami 86.2 2.8 9.5E-05 33.5 7.7 64 12-85 332-395 (398)
36 4dq6_A Putative pyridoxal phos 86.2 4.3 0.00015 31.8 8.7 74 2-85 316-390 (391)
37 2c0r_A PSAT, phosphoserine ami 86.0 1.3 4.4E-05 34.8 5.6 62 12-85 297-358 (362)
38 3mc6_A Sphingosine-1-phosphate 85.6 2.2 7.7E-05 35.3 7.1 70 2-87 367-436 (497)
39 3f9t_A TDC, L-tyrosine decarbo 85.5 2.4 8.2E-05 33.0 6.9 67 2-85 329-395 (397)
40 3tqx_A 2-amino-3-ketobutyrate 85.4 1.7 5.9E-05 34.2 6.1 76 2-86 319-394 (399)
41 1wyu_B Glycine dehydrogenase s 85.1 2.7 9.1E-05 35.0 7.3 76 2-86 364-439 (474)
42 3hdo_A Histidinol-phosphate am 84.8 5.7 0.00019 31.0 8.8 68 2-85 285-352 (360)
43 2bwn_A 5-aminolevulinate synth 84.7 1.6 5.5E-05 34.7 5.6 75 2-85 322-397 (401)
44 1ax4_A Tryptophanase; tryptoph 84.3 1.4 4.8E-05 35.9 5.2 82 2-87 343-440 (467)
45 3ele_A Amino transferase; RER0 84.2 6.1 0.00021 31.2 8.8 71 2-86 324-394 (398)
46 3euc_A Histidinol-phosphate am 84.2 3.4 0.00012 32.3 7.2 68 2-85 298-365 (367)
47 2dr1_A PH1308 protein, 386AA l 84.2 5.2 0.00018 31.1 8.3 66 11-86 312-377 (386)
48 3kki_A CAI-1 autoinducer synth 84.0 2.1 7.3E-05 34.3 6.1 75 2-86 328-402 (409)
49 1t3i_A Probable cysteine desul 83.9 2.4 8.4E-05 33.5 6.3 79 2-86 326-411 (420)
50 2r2n_A Kynurenine/alpha-aminoa 83.4 8 0.00027 31.2 9.4 71 10-86 351-422 (425)
51 1j32_A Aspartate aminotransfer 83.0 3.7 0.00013 32.3 7.1 72 2-85 312-384 (388)
52 3ez1_A Aminotransferase MOCR f 82.9 6.4 0.00022 31.5 8.6 69 11-86 344-413 (423)
53 3l8a_A METC, putative aminotra 82.8 2.4 8.4E-05 34.2 6.0 74 2-85 345-419 (421)
54 1kmj_A Selenocysteine lyase; p 82.7 6 0.0002 30.9 8.1 79 2-86 322-403 (406)
55 4hvk_A Probable cysteine desul 82.1 4.2 0.00014 31.4 6.9 68 13-86 290-371 (382)
56 3a2b_A Serine palmitoyltransfe 81.2 3.2 0.00011 32.9 6.1 76 2-86 315-390 (398)
57 1vp4_A Aminotransferase, putat 81.2 3.8 0.00013 33.0 6.6 77 2-86 340-416 (425)
58 3fkd_A L-threonine-O-3-phospha 81.2 7.2 0.00025 30.2 8.1 65 10-86 275-340 (350)
59 1v2d_A Glutamine aminotransfer 80.8 6.8 0.00023 30.7 7.9 72 2-86 298-369 (381)
60 2w8t_A SPT, serine palmitoyltr 80.5 4.6 0.00016 32.7 6.9 78 2-86 336-413 (427)
61 2dgk_A GAD-beta, GADB, glutama 80.4 7.3 0.00025 31.9 8.2 79 2-86 348-432 (452)
62 1elu_A L-cysteine/L-cystine C- 80.3 3.4 0.00012 32.3 5.9 67 2-81 318-385 (390)
63 1bs0_A Protein (8-amino-7-oxon 79.5 2.8 9.5E-05 33.0 5.1 73 2-83 310-382 (384)
64 1w23_A Phosphoserine aminotran 79.3 3.4 0.00012 32.0 5.6 63 12-86 296-358 (360)
65 3f0h_A Aminotransferase; RER07 79.1 6 0.00021 30.8 7.0 74 2-86 298-372 (376)
66 1d2f_A MALY protein; aminotran 78.3 6.7 0.00023 30.9 7.1 65 12-85 321-386 (390)
67 2fnu_A Aminotransferase; prote 78.2 1.3 4.3E-05 34.7 2.7 71 12-86 283-370 (375)
68 3ftb_A Histidinol-phosphate am 78.0 10 0.00034 29.3 7.9 63 11-85 296-358 (361)
69 3ppl_A Aspartate aminotransfer 77.9 13 0.00045 29.8 8.9 69 11-86 349-418 (427)
70 2zc0_A Alanine glyoxylate tran 77.7 8.9 0.0003 30.3 7.7 69 11-86 333-402 (407)
71 3qgu_A LL-diaminopimelate amin 77.2 6.2 0.00021 31.9 6.7 73 2-86 365-438 (449)
72 2x5d_A Probable aminotransfera 76.7 8.6 0.0003 30.6 7.4 65 12-86 328-396 (412)
73 1qz9_A Kynureninase; kynurenin 76.3 12 0.0004 29.6 8.0 69 2-86 329-400 (416)
74 1vjo_A Alanine--glyoxylate ami 76.3 9.3 0.00032 29.9 7.4 65 12-85 327-392 (393)
75 7aat_A Aspartate aminotransfer 75.7 3.2 0.00011 32.9 4.5 45 23-85 356-400 (401)
76 2dou_A Probable N-succinyldiam 75.5 7.1 0.00024 30.6 6.5 64 12-85 312-375 (376)
77 1xi9_A Putative transaminase; 74.7 8.7 0.0003 30.6 6.9 66 12-86 334-401 (406)
78 3ezs_A Aminotransferase ASPB; 74.7 11 0.00037 29.3 7.4 66 10-86 307-373 (376)
79 2x5f_A Aspartate_tyrosine_phen 74.7 8.9 0.0003 30.8 7.0 58 13-86 369-427 (430)
80 1v72_A Aldolase; PLP-dependent 74.6 7.4 0.00025 29.9 6.2 67 2-86 285-351 (356)
81 3jtx_A Aminotransferase; NP_28 74.6 10 0.00035 29.7 7.2 67 11-85 325-395 (396)
82 1c4k_A Protein (ornithine deca 74.1 9.2 0.00031 34.6 7.5 54 20-86 511-564 (730)
83 2z9v_A Aspartate aminotransfer 73.9 12 0.00041 29.2 7.4 67 11-86 302-369 (392)
84 4eb5_A Probable cysteine desul 73.8 5.5 0.00019 30.9 5.4 69 12-86 289-371 (382)
85 3ffr_A Phosphoserine aminotran 73.8 10 0.00034 29.1 6.8 61 12-84 300-360 (362)
86 2eh6_A Acoat, acetylornithine 73.2 8.4 0.00029 30.0 6.3 58 11-84 317-374 (375)
87 2oqx_A Tryptophanase; lyase, p 73.0 9.2 0.00032 31.0 6.7 80 2-87 345-441 (467)
88 1mdo_A ARNB aminotransferase; 73.0 6.2 0.00021 31.0 5.5 72 11-86 295-384 (393)
89 1o4s_A Aspartate aminotransfer 72.9 13 0.00045 29.4 7.5 69 2-85 317-386 (389)
90 1c7n_A Cystalysin; transferase 72.7 9.9 0.00034 29.9 6.7 66 12-86 325-391 (399)
91 3e9k_A Kynureninase; kynurenin 72.7 4.7 0.00016 33.0 4.9 59 12-86 400-459 (465)
92 3p1t_A Putative histidinol-pho 72.0 12 0.00041 28.5 6.9 59 11-85 276-334 (337)
93 1b5p_A Protein (aspartate amin 71.7 6.9 0.00024 31.0 5.6 60 12-82 320-379 (385)
94 3piu_A 1-aminocyclopropane-1-c 71.6 11 0.00038 30.3 6.9 76 2-86 349-430 (435)
95 2z61_A Probable aspartate amin 71.5 9.4 0.00032 29.8 6.3 71 2-85 297-368 (370)
96 2ch1_A 3-hydroxykynurenine tra 71.3 13 0.00045 29.0 7.1 65 13-86 316-381 (396)
97 3d6k_A Putative aminotransfera 70.5 25 0.00086 28.1 8.8 69 10-86 346-416 (422)
98 3ruy_A Ornithine aminotransfer 70.2 13 0.00045 29.2 6.9 59 11-85 333-391 (392)
99 2o0r_A RV0858C (N-succinyldiam 69.9 11 0.00037 30.0 6.4 77 2-85 307-393 (411)
100 2huf_A Alanine glyoxylate amin 69.6 18 0.00061 28.2 7.5 66 12-86 315-381 (393)
101 3isl_A Purine catabolism prote 69.0 25 0.00084 27.5 8.3 66 12-86 322-388 (416)
102 1wyu_A Glycine dehydrogenase ( 68.7 17 0.00059 29.4 7.5 72 2-84 365-436 (438)
103 3dr4_A Putative perosamine syn 68.6 8.2 0.00028 30.5 5.4 70 12-85 305-390 (391)
104 3ei9_A LL-diaminopimelate amin 68.3 12 0.00042 29.9 6.4 68 2-81 353-421 (432)
105 3fvs_A Kynurenine--oxoglutarat 67.0 5.5 0.00019 31.7 4.1 78 2-86 328-420 (422)
106 1sff_A 4-aminobutyrate aminotr 67.0 11 0.00038 29.9 5.9 64 12-86 352-422 (426)
107 3ju7_A Putative PLP-dependent 66.7 8 0.00027 31.2 5.0 75 10-86 285-373 (377)
108 2e7j_A SEP-tRNA:Cys-tRNA synth 66.4 4 0.00014 31.7 3.0 77 2-86 289-368 (371)
109 2ord_A Acoat, acetylornithine 65.6 24 0.00081 27.8 7.6 60 12-85 335-394 (397)
110 1uu1_A Histidinol-phosphate am 65.4 5.8 0.0002 30.7 3.8 51 12-81 281-331 (335)
111 1yiz_A Kynurenine aminotransfe 64.7 20 0.00068 28.6 7.0 77 2-85 336-426 (429)
112 2c81_A Glutamine-2-deoxy-scyll 63.8 24 0.00084 28.1 7.4 71 13-86 304-412 (418)
113 3nnk_A Ureidoglycine-glyoxylat 63.5 25 0.00087 27.4 7.3 65 12-86 322-388 (411)
114 3aow_A Putative uncharacterize 63.4 25 0.00085 28.8 7.5 68 12-86 376-443 (448)
115 1u08_A Hypothetical aminotrans 63.4 32 0.0011 26.8 7.9 72 2-81 310-383 (386)
116 1fg7_A Histidinol phosphate am 62.9 15 0.00051 28.8 5.9 56 11-82 296-352 (356)
117 4eu1_A Mitochondrial aspartate 61.8 14 0.00047 29.4 5.5 45 23-85 364-408 (409)
118 1eg5_A Aminotransferase; PLP-d 61.4 29 0.001 26.6 7.2 79 2-86 280-374 (384)
119 1iqo_A Hypothetical protein MT 60.4 4.7 0.00016 27.5 2.1 35 8-44 46-80 (88)
120 2ez2_A Beta-tyrosinase, tyrosi 60.1 16 0.00056 29.4 5.7 82 2-87 333-430 (456)
121 3rq1_A Aminotransferase class 59.6 20 0.00068 28.5 6.1 54 14-86 360-413 (418)
122 3asa_A LL-diaminopimelate amin 59.0 19 0.00065 28.5 5.9 73 2-85 316-390 (400)
123 1b9h_A AHBA synthase, protein 58.7 21 0.00072 27.9 6.0 71 12-86 290-386 (388)
124 3cai_A Possible aminotransfera 58.6 22 0.00074 27.9 6.1 73 2-82 324-403 (406)
125 2x3l_A ORN/Lys/Arg decarboxyla 58.6 16 0.00056 30.1 5.6 68 2-86 284-351 (446)
126 1ybx_A Conserved hypothetical 58.4 12 0.00041 27.5 4.2 44 69-135 98-142 (143)
127 1iay_A ACC synthase 2, 1-amino 58.1 29 0.001 27.6 6.9 76 2-86 344-425 (428)
128 2o1b_A Aminotransferase, class 58.0 22 0.00074 28.4 6.1 73 2-85 327-400 (404)
129 1bw0_A TAT, protein (tyrosine 57.8 57 0.0019 25.6 8.5 73 2-86 334-411 (416)
130 1o69_A Aminotransferase; struc 57.6 13 0.00045 29.5 4.7 60 23-86 311-385 (394)
131 1lc5_A COBD, L-threonine-O-3-p 57.3 22 0.00074 27.6 5.8 70 2-86 289-358 (364)
132 1z7d_A Ornithine aminotransfer 56.5 42 0.0014 27.2 7.7 62 12-86 366-427 (433)
133 3pj0_A LMO0305 protein; struct 56.4 12 0.00042 28.8 4.2 42 2-43 279-321 (359)
134 3bb8_A CDP-4-keto-6-deoxy-D-gl 55.7 26 0.00088 28.3 6.2 59 23-85 356-433 (437)
135 2pb2_A Acetylornithine/succiny 55.6 40 0.0014 27.1 7.4 63 11-86 353-416 (420)
136 3op7_A Aminotransferase class 55.1 36 0.0012 26.3 6.8 63 12-86 306-369 (375)
137 4adb_A Succinylornithine trans 55.0 56 0.0019 25.5 8.0 62 12-86 336-398 (406)
138 1vef_A Acetylornithine/acetyl- 54.7 34 0.0012 26.8 6.6 58 12-85 336-394 (395)
139 3lws_A Aromatic amino acid bet 54.7 11 0.00039 29.1 3.8 78 2-84 277-355 (357)
140 4h51_A Aspartate aminotransfer 54.6 19 0.00066 29.9 5.4 45 23-86 371-415 (420)
141 2oat_A Ornithine aminotransfer 54.3 51 0.0018 26.8 7.9 62 12-86 375-437 (439)
142 3uwc_A Nucleotide-sugar aminot 49.8 26 0.00087 27.1 5.1 58 25-86 294-369 (374)
143 2q5z_A MAZG, hypothetical prot 49.8 27 0.00093 23.9 4.7 15 117-131 99-113 (114)
144 3kgw_A Alanine-glyoxylate amin 49.8 61 0.0021 24.9 7.3 65 13-86 321-386 (393)
145 3mad_A Sphingosine-1-phosphate 49.0 62 0.0021 26.7 7.7 71 2-87 398-468 (514)
146 3dyd_A Tyrosine aminotransfera 47.9 98 0.0033 24.7 8.5 64 12-86 354-422 (427)
147 3dfz_A SIRC, precorrin-2 dehyd 46.3 40 0.0014 25.9 5.7 58 27-85 106-165 (223)
148 1yaa_A Aspartate aminotransfer 46.1 28 0.00096 27.5 4.9 46 23-86 364-409 (412)
149 3ihj_A Alanine aminotransferas 45.3 63 0.0021 26.9 7.2 57 22-86 433-491 (498)
150 2a3q_A Hypothetical protein; M 43.8 49 0.0017 24.5 5.7 18 117-134 116-133 (170)
151 3nx3_A Acoat, acetylornithine 43.7 87 0.003 24.4 7.5 61 12-86 333-393 (395)
152 3e2y_A Kynurenine-oxoglutarate 43.7 39 0.0013 26.4 5.4 74 2-82 321-407 (410)
153 3bwn_A AT1G70560, L-tryptophan 43.1 18 0.0006 29.0 3.3 58 14-85 327-384 (391)
154 2q7w_A Aspartate aminotransfer 42.5 25 0.00086 27.4 4.0 42 25-84 354-395 (396)
155 1svv_A Threonine aldolase; str 42.3 17 0.00059 27.7 3.0 68 2-85 288-355 (359)
156 4f4e_A Aromatic-amino-acid ami 42.3 29 0.001 27.6 4.5 45 23-85 375-419 (420)
157 3b1d_A Betac-S lyase; HET: PLP 48.3 5.3 0.00018 31.7 0.0 64 13-85 326-390 (392)
158 1s0a_A Adenosylmethionine-8-am 42.1 66 0.0023 25.6 6.6 59 13-86 364-422 (429)
159 3t18_A Aminotransferase class 41.1 43 0.0015 26.4 5.3 38 14-65 358-395 (413)
160 2oga_A Transaminase; PLP-depen 40.2 40 0.0014 26.7 4.9 59 24-86 318-394 (399)
161 1pff_A Methionine gamma-lyase; 39.2 43 0.0015 25.4 4.8 64 11-82 244-328 (331)
162 3b8x_A WBDK, pyridoxamine 5-ph 39.1 90 0.0031 24.3 6.8 65 12-81 303-389 (390)
163 3ke3_A Putative serine-pyruvat 37.5 41 0.0014 26.5 4.6 53 30-86 322-374 (379)
164 3ol3_A Putative uncharacterize 36.5 66 0.0023 22.5 5.0 26 58-83 33-58 (107)
165 2aeu_A Hypothetical protein MJ 36.5 39 0.0013 26.8 4.4 51 29-86 319-369 (374)
166 3lvm_A Cysteine desulfurase; s 36.1 66 0.0023 25.2 5.6 67 13-87 318-398 (423)
167 1ajs_A Aspartate aminotransfer 35.9 58 0.002 25.6 5.3 45 24-86 365-409 (412)
168 4gyw_A UDP-N-acetylglucosamine 35.3 56 0.0019 29.1 5.5 97 25-132 589-688 (723)
169 2ay1_A Aroat, aromatic amino a 34.9 45 0.0015 26.0 4.4 42 25-84 351-392 (394)
170 3n75_A LDC, lysine decarboxyla 34.3 49 0.0017 29.8 5.0 47 23-82 508-554 (715)
171 3meb_A Aspartate aminotransfer 34.3 48 0.0016 26.9 4.6 47 23-86 396-442 (448)
172 3f6t_A Aspartate aminotransfer 32.0 54 0.0018 27.7 4.7 51 27-86 473-523 (533)
173 4f21_A Carboxylesterase/phosph 31.7 64 0.0022 24.3 4.7 45 25-86 201-245 (246)
174 2hox_A ALLIIN lyase 1; cystein 30.4 76 0.0026 25.7 5.2 61 12-85 361-422 (427)
175 3qm2_A Phosphoserine aminotran 30.3 1.3E+02 0.0043 24.6 6.5 61 13-85 322-382 (386)
176 3obc_A Pyrophosphatase; dimeri 29.4 69 0.0024 22.5 4.2 18 117-134 97-114 (118)
177 3cu5_A Two component transcrip 28.9 1.2E+02 0.0042 19.7 6.1 73 11-86 49-122 (141)
178 3m5u_A Phosphoserine aminotran 28.8 1.3E+02 0.0046 24.2 6.4 61 13-85 296-357 (361)
179 4h87_A Kanadaptin; FHA domain 28.5 33 0.0011 24.1 2.3 39 11-62 82-122 (130)
180 1j8b_A YBAB; hypothetical prot 28.0 64 0.0022 22.3 3.7 41 72-135 67-108 (112)
181 3b46_A Aminotransferase BNA3; 27.7 1E+02 0.0036 24.7 5.6 73 2-81 351-440 (447)
182 3frk_A QDTB; aminotransferase, 27.2 67 0.0023 24.9 4.2 57 25-85 291-365 (373)
183 1t3q_C Quinoline 2-oxidoreduct 27.1 61 0.0021 25.6 3.9 10 2-11 26-35 (288)
184 3fsl_A Aromatic-amino-acid ami 26.5 71 0.0024 24.8 4.2 43 24-84 354-396 (397)
185 3tcm_A Alanine aminotransferas 25.5 1E+02 0.0036 25.5 5.3 50 29-86 443-492 (500)
186 3vax_A Putative uncharacterize 24.8 37 0.0013 26.4 2.2 67 12-85 316-397 (400)
187 1ayg_A Cytochrome C-552; elect 24.2 50 0.0017 20.0 2.4 17 67-83 62-78 (80)
188 2q73_A MAZG, hypothetical prot 24.2 1E+02 0.0035 20.3 4.2 17 117-133 79-95 (100)
189 2kvc_A Putative uncharacterize 24.0 1.7E+02 0.0059 20.2 5.3 66 58-133 28-94 (103)
190 3pzj_A Probable acetyltransfer 23.5 56 0.0019 23.0 2.9 39 45-83 20-59 (209)
191 3r8n_M 30S ribosomal protein S 23.1 1.1E+02 0.0038 21.3 4.3 38 22-81 22-59 (114)
192 2eo5_A 419AA long hypothetical 23.1 1E+02 0.0035 24.5 4.6 61 12-86 356-416 (419)
193 2lky_A Uncharacterized protein 23.0 1.7E+02 0.0059 20.5 5.2 65 58-132 30-95 (112)
194 2cjg_A L-lysine-epsilon aminot 22.1 1.5E+02 0.0052 23.9 5.6 61 12-86 386-446 (449)
195 3cg4_A Response regulator rece 22.1 1.6E+02 0.0055 18.7 5.8 72 12-86 52-126 (142)
196 3n53_A Response regulator rece 21.9 1E+02 0.0035 19.8 3.8 72 12-86 47-121 (140)
197 2xzm_M RPS18E; ribosome, trans 21.5 1.4E+02 0.0047 22.0 4.7 40 22-83 36-75 (155)
198 1zod_A DGD, 2,2-dialkylglycine 21.3 1.9E+02 0.0065 22.8 5.9 66 12-86 358-430 (433)
199 1r4t_A Exoenzyme S; EXOS, GAP, 21.2 2E+02 0.0069 21.2 5.5 22 115-136 124-146 (153)
200 3iz6_M 40S ribosomal protein S 21.1 1.3E+02 0.0044 22.1 4.4 40 22-83 34-73 (152)
201 3a8u_X Omega-amino acid--pyruv 20.9 1.8E+02 0.0062 23.1 5.7 61 12-86 381-445 (449)
202 1pu1_A Hypothetical protein MT 20.8 68 0.0023 22.0 2.6 24 64-87 4-27 (94)
203 3h4q_A Putative acetyltransfer 20.6 40 0.0014 22.9 1.5 29 57-85 12-40 (188)
204 2v1y_A Phosphatidylinositol-4, 20.6 57 0.0019 22.7 2.3 21 114-134 40-60 (108)
205 3j20_O 30S ribosomal protein S 20.3 1.3E+02 0.0043 22.1 4.2 40 22-83 29-68 (148)
206 3cu4_A Cytochrome C family pro 20.1 59 0.002 19.8 2.1 16 68-83 67-82 (85)
No 1
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=100.00 E-value=1.2e-42 Score=303.88 Aligned_cols=135 Identities=51% Similarity=0.861 Sum_probs=123.4
Q ss_pred CCCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHH
Q 032257 1 MGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (144)
Q Consensus 1 ~G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~ 80 (144)
+||+|++|||||||||||++++|++|++|+++|+++||+||||+||+|++|+.||||||||||+|||||+|+||++||+|
T Consensus 354 ~G~~vvsGgTdnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~ 433 (490)
T 3ou5_A 354 RGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDF 433 (490)
T ss_dssp TTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHH
T ss_pred CCCeeecCCCCceEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhcccchhhhHHhhhcccc-cHHHHHHHHHHHHHHHhhCCCCCCcc
Q 032257 81 FDAAVKLTVKIKSETQGTKLKDFVATTQSAN-FQSEIAKRCHDVEEYAKQFPTIGFEK 137 (144)
Q Consensus 81 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ir~~V~~l~~~fPi~~~~~ 137 (144)
|+++|..+.+++.. ..++++|+..+..+. +.+.++++|++|.+||++||+|+||+
T Consensus 434 I~~~l~~~~~~~~~--~~kl~~f~~~~~~~~~~~~~i~~lr~~V~~l~~~FP~pg~d~ 489 (490)
T 3ou5_A 434 IDEGVNIGLEVKSK--TAKLQDFKSFLLKDSETSQRLANLRQRVEQFARAFPMPGFDE 489 (490)
T ss_dssp HHHHHHHHHHHHHT--CCSHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTTSCCSSCSC
T ss_pred HHHHHHhhhhhhhh--hhhhHHHHHHHhcCcccHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999998888765 346888877654332 34678899999999999999999975
No 2
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.96 E-value=8.8e-29 Score=215.83 Aligned_cols=135 Identities=52% Similarity=0.870 Sum_probs=121.9
Q ss_pred CCCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHH
Q 032257 1 MGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (144)
Q Consensus 1 ~G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~ 80 (144)
+|+++++++||||++++|+++.|++|.++++.|+++||.+|+|.+|+|.+|+.+|||||||+++|+||++++||++++++
T Consensus 354 ~G~~v~~~~t~t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~ 433 (490)
T 2a7v_A 354 RGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDF 433 (490)
T ss_dssp TTCEEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHH
T ss_pred cCcEEecCCCCCeEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhcccchhhhHHhhhcccc-cHHHHHHHHHHHHHHHhhCCCCCCcc
Q 032257 81 FDAAVKLTVKIKSETQGTKLKDFVATTQSAN-FQSEIAKRCHDVEEYAKQFPTIGFEK 137 (144)
Q Consensus 81 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ir~~V~~l~~~fPi~~~~~ 137 (144)
|.+++.++.+++.+. +++++|++.+.+++ ..+.+.++|++|.+||.+||+|+++.
T Consensus 434 i~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 489 (490)
T 2a7v_A 434 IDEGVNIGLEVKSKT--AKLQDFKSFLLKDSETSQRLANLRQRVEQFARAFPMPGFDE 489 (490)
T ss_dssp HHHHHHHHHHHHHHC--CSHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTTSCCSSCSC
T ss_pred HHHHHHhhhhhhhhh--chhhHHHhhhccChhhHHHHHHHHHHHHHHHHhCCCCCcCC
Confidence 999999887777653 56889998776542 12457899999999999999999864
No 3
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.87 E-value=1.2e-21 Score=167.96 Aligned_cols=135 Identities=50% Similarity=0.835 Sum_probs=114.6
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|+++++++|++|++++|++..|+++.++++.|+++||.+++|.+|++..++.+++||||++.+|+|||+++||+++++.|
T Consensus 345 g~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l 424 (483)
T 1rv3_A 345 GYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFI 424 (483)
T ss_dssp TCEEGGGSCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHH
T ss_pred CCEeccCCCCCceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHHHHHHHHHH
Confidence 78999999999999999998899999999999999999999999998767778999999999999999999999999999
Q ss_pred HHHHHhhhhhhhhcc-cchhhhHHhhhcccc-cHHHHHHHHHHHHHHHhhCCCCCCc
Q 032257 82 DAAVKLTVKIKSETQ-GTKLKDFVATTQSAN-FQSEIAKRCHDVEEYAKQFPTIGFE 136 (144)
Q Consensus 82 ~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~ir~~V~~l~~~fPi~~~~ 136 (144)
.+++..+.+++.... ..++++|++.+.+++ ..+.++++|++|.+||.+||+|+++
T Consensus 425 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (483)
T 1rv3_A 425 HRGIELTVQIQDDTGPRATLKEFKEKLAGDEKHQRAVRALRQEVESFAALFPLPGLP 481 (483)
T ss_dssp HHHHHHHHHHHHTTCSSCCHHHHHHHHHSCHHHHHHHHHHHHHHHHHHTTSCCCSSS
T ss_pred HHHHHhccchhccccccchhhHHHHhhccccchhHHHHHHHHHHHHHHHhCCCCCcC
Confidence 999976443332111 226789988876431 1136788999999999999999886
No 4
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.75 E-value=5.9e-18 Score=142.69 Aligned_cols=117 Identities=38% Similarity=0.666 Sum_probs=93.9
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCC-CCCCCCceeecchhhhhcCCCHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~-~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~ 80 (144)
|++++.+++++|++++|+++.|+++..+.+.|++.||.+++|.+|++. ++..+++||||++++|+||++++|+.+++++
T Consensus 327 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~ 406 (447)
T 3h7f_A 327 GVSVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADI 406 (447)
T ss_dssp TCEEGGGSCSSSEEEEECTTSSCCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHH
T ss_pred CeEEecCCCCCCEEEEEcCCCCCCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHH
Confidence 788888889999999999988999999999999999999999999985 7788999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhcccchhhhHHhhhcccccHHHHHHHHHHHHHHHhhCCCC-CCcccccc
Q 032257 81 FDAAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCHDVEEYAKQFPTI-GFEKETMK 141 (144)
Q Consensus 81 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~V~~l~~~fPi~-~~~~~~~~ 141 (144)
|.+++... .+. + ++++|++|.+|+++||+| +++.|++.
T Consensus 407 l~~~l~~~-------------------~~~---~-~~~~~~~v~~~~~~~~~~~~~~~~~~~ 445 (447)
T 3h7f_A 407 IATALATG-------------------SSV---D-VSALKDRATRLARAFPLYDGLEEWSLV 445 (447)
T ss_dssp HHHHHHSG-------------------GGC---C-HHHHHHHHHHHHHHSCSSTTGGGCBSC
T ss_pred HHHHHhcc-------------------Cch---h-HHHHHHHHHHHHHhCCCCCCchhhhhc
Confidence 99988531 011 2 678999999999999996 58888875
No 5
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.54 E-value=9.8e-14 Score=113.22 Aligned_cols=111 Identities=33% Similarity=0.581 Sum_probs=98.4
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCC-CCCCCCceeecchhhhhcCCCHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~-~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~ 80 (144)
|++++.+++.+|++++++++.|+++..+.+.|.+.||.++....|+.. +++.++++|||++.+|+++++++|++++++.
T Consensus 302 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~ 381 (417)
T 3n0l_A 302 KFKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNY 381 (417)
T ss_dssp TCEEGGGSCSSSEEEEECTTSSSCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHH
T ss_pred CceeccCCCCceEEEEEcccCCCCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHH
Confidence 677777889999999999888899999999999999999999999886 6778899999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhcccchhhhHHhhhcccccHHHHHHHHHHHHHHHhhCCCCC
Q 032257 81 FDAAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCHDVEEYAKQFPTIG 134 (144)
Q Consensus 81 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~V~~l~~~fPi~~ 134 (144)
|.+++... . +.+.+.+++++|.+|+.+||+|+
T Consensus 382 l~~~l~~~-------------------~---~~~~~~~~~~~v~~~~~~~~~~~ 413 (417)
T 3n0l_A 382 IADILDDV-------------------N---NEKLQENIKQELKKLASNFIIYE 413 (417)
T ss_dssp HHHHHHTT-------------------T---CHHHHHHHHHHHHHHHTTCCCCS
T ss_pred HHHHHhcc-------------------c---chhhHHHHHHHHHHHHhcCCCcc
Confidence 99988531 0 12467889999999999999975
No 6
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.44 E-value=1.6e-12 Score=105.89 Aligned_cols=111 Identities=38% Similarity=0.645 Sum_probs=96.8
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCC-CCCCCCceeecchhhhhcCCCHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~-~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~ 80 (144)
|++++.+++++|++++++...++++..+.+.|++.||.+..+..|++. +++.++|+||+.+.+|++++.++|++++++.
T Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~ 388 (420)
T 3gbx_A 309 GYKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGW 388 (420)
T ss_dssp TCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHH
T ss_pred CCeeccCCCCCeEEEEEcCCCCCCHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHH
Confidence 678877778999999999877889999999999999999998899885 6777889999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhcccchhhhHHhhhcccccHHHHHHHHHHHHHHHhhCCCCC
Q 032257 81 FDAAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCHDVEEYAKQFPTIG 134 (144)
Q Consensus 81 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~V~~l~~~fPi~~ 134 (144)
|.+++... ++.+.+++++++|.+|+++||+|.
T Consensus 389 l~~~l~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~ 420 (420)
T 3gbx_A 389 MCDVLDNI----------------------NDEATIERVKAKVLDICARFPVYA 420 (420)
T ss_dssp HHHHHHTT----------------------TCHHHHHHHHHHHHHHHHHSCSCC
T ss_pred HHHHHhCc----------------------ccchhHHHHHHHHHHHHHhCCCCC
Confidence 99988521 012567889999999999999974
No 7
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.32 E-value=2.2e-11 Score=99.25 Aligned_cols=115 Identities=35% Similarity=0.585 Sum_probs=95.3
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCC-CCCCCCceeecchhhhhcCCCHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~-~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~ 80 (144)
|++++.+++.+|++++++.+.++++..+.+.|.+.||.+.....|+.. +++.++++|||.+.++++++.++|++++++.
T Consensus 310 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~ 389 (425)
T 3ecd_A 310 GVDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRL 389 (425)
T ss_dssp TCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHH
T ss_pred CCeeccCCCCceEEEEEeCCCCCCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHH
Confidence 677777678899999999877889999999999999999988888875 5666789999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhcccchhhhHHhhhcccccHHHHHHHHHHHHHHHhhCCCC
Q 032257 81 FDAAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCHDVEEYAKQFPTI 133 (144)
Q Consensus 81 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~V~~l~~~fPi~ 133 (144)
|.+++...... ... +.+.+++++++|.+||+.||+|
T Consensus 390 l~~~l~~~~~~---------------~~~--~~~~~~~~~~~~~~~~~~~~~~ 425 (425)
T 3ecd_A 390 ILEVFEALRTN---------------PEG--DHATEQRVRREIFALCERFPIY 425 (425)
T ss_dssp HHHHHHHHHHC---------------TTC--CHHHHHHHHHHHHHHHHTSCCC
T ss_pred HHHHHhccccc---------------ccc--CchhHHHHHHHHHHHHhcCCCC
Confidence 99988532000 000 1256788999999999999996
No 8
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=98.46 E-value=1.8e-06 Score=69.82 Aligned_cols=106 Identities=42% Similarity=0.674 Sum_probs=82.2
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCC-CCCCCCceeecchhhhhcCCCHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~-~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~ 80 (144)
|++++...+..+++++++...+++...+.+.|.+.||.+.....|... .+..++.+||+.+..|+++.+++|++++.+.
T Consensus 301 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~ 380 (407)
T 2dkj_A 301 GYRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAEL 380 (407)
T ss_dssp TCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHH
T ss_pred CceeecCCCCceEEEEECcccCCCHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHH
Confidence 566665445789999998766778899999999999999865544222 2233567999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhcccchhhhHHhhhcccccHHHHHHHHHHHHHHHhhCCCC
Q 032257 81 FDAAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCHDVEEYAKQFPTI 133 (144)
Q Consensus 81 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~V~~l~~~fPi~ 133 (144)
|.+++.. ++ .+.++++|.+|..+||+|
T Consensus 381 l~~~~~~---------------------~~-----~~~~~~~~~~~~~~~~~~ 407 (407)
T 2dkj_A 381 IDRALLE---------------------GP-----SEALREEVRRLALAHPMP 407 (407)
T ss_dssp HHHHHHH---------------------CC-----CHHHHHHHHHHHHTSCCC
T ss_pred HHHHHhc---------------------Cc-----hHHHHHHHHHHHHhcCCC
Confidence 8887741 00 135889999999999986
No 9
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=98.29 E-value=6.8e-06 Score=66.37 Aligned_cols=104 Identities=41% Similarity=0.673 Sum_probs=79.3
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCC-CCCCCCceeecchhhhhcCCCHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~-~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~ 80 (144)
|++++......+++++++...+++...+.+.|.+.||.+.....|... .+..++++||+.+..|++.++++|++++.+.
T Consensus 300 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~ 379 (405)
T 2vi8_A 300 GFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAI 379 (405)
T ss_dssp TCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHH
T ss_pred CCeEecCCCCceEEEEEccCCCCCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHH
Confidence 566665334688999998766778999999999999999876555332 3334568999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhcccchhhhHHhhhcccccHHHHHHHHHHHHHHH
Q 032257 81 FDAAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCHDVEEYA 127 (144)
Q Consensus 81 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~V~~l~ 127 (144)
|.+++.. ++ + .+.+..+|++|.+|+
T Consensus 380 l~~~~~~---~~----------------~---~~~~~~~~~~~~~~~ 404 (405)
T 2vi8_A 380 IGLVLKN---VG----------------S---EQALEEARQRVAALT 404 (405)
T ss_dssp HHHHHTC---TT----------------C---HHHHHHHHHHHHHHH
T ss_pred HHHHHhc---cc----------------c---cccHHHHHHHHHHhh
Confidence 9887742 11 1 134677999999986
No 10
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=92.62 E-value=0.41 Score=37.08 Aligned_cols=75 Identities=15% Similarity=0.123 Sum_probs=51.8
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|++++......+++++++.. ++++.++.+.|.+.||.+..-.-| ..++.|||+....+ +++|++++.+.|
T Consensus 272 g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~~~~~-----~~~~~iRi~~~~~~----~~~~i~~~~~~l 341 (352)
T 1iug_A 272 GLRPVPKRFSPAVAAFYLPE-GVPYARVKEAFAQRGAVIAGGQGP-----LKGKVFRLSLMGAY----DRYEALGVAGMF 341 (352)
T ss_dssp TCEESCSSBCTTCEEEECCT-TCCHHHHHHHHHTTTEECEECCGG-----GTTTEEEECCCSSC----CHHHHHHHHHHH
T ss_pred CCcccccccCCeEEEEEcCC-CCCHHHHHHHHHHCCEEEEeCCCc-----cCCCEEEEEccccC----CHHHHHHHHHHH
Confidence 45554321246788888753 678889999998889998753311 12467999976543 478999888888
Q ss_pred HHHHH
Q 032257 82 DAAVK 86 (144)
Q Consensus 82 ~~~l~ 86 (144)
.+++.
T Consensus 342 ~~~~~ 346 (352)
T 1iug_A 342 REVLE 346 (352)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77663
No 11
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=92.21 E-value=0.65 Score=36.46 Aligned_cols=67 Identities=13% Similarity=0.157 Sum_probs=48.0
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|+++.. .+..++++++... ++.++.+.|.+.||.+..-..++ ++.+||+.. +++|++++.+.+
T Consensus 298 g~~~~~--~~~~~~~~~~~~~--~~~~~~~~l~~~gi~v~~g~~~~------~~~iRis~~-------~~~~i~~l~~~l 360 (365)
T 3get_A 298 NIKIID--SYTNFITYFFDEK--NSTDLSEKLLKKGIIIRNLKSYG------LNAIRITIG-------TSYENEKFFTEF 360 (365)
T ss_dssp TCEECC--CSSSEEEEECSSS--CHHHHHHHHHTTTEECEECGGGT------CSEEEEECC-------CHHHHHHHHHHH
T ss_pred CCEECC--CCCeEEEEECCCC--CHHHHHHHHHHCCEEEEECccCC------CCEEEEEcC-------CHHHHHHHHHHH
Confidence 455442 2345578888653 78899999999999998544333 467999964 688999888887
Q ss_pred HHHH
Q 032257 82 DAAV 85 (144)
Q Consensus 82 ~~~l 85 (144)
.+++
T Consensus 361 ~~~l 364 (365)
T 3get_A 361 DKIL 364 (365)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7655
No 12
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=92.03 E-value=0.5 Score=38.11 Aligned_cols=66 Identities=17% Similarity=0.226 Sum_probs=47.4
Q ss_pred CccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 10 TENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 10 Td~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
...+++++++. ++++.++.+.|.+.||.+..-..++ ...++.+||+... .+++|++++.+.|.+++
T Consensus 369 ~~~~~~~~~~~--~~~~~~l~~~L~~~gi~v~~~~~~~---~~~~~~iRis~~~-----~~~e~i~~~~~~l~~~~ 434 (437)
T 3g0t_A 369 ADGFYFTVGYK--GMDSSKLIEKFVRYGMCAITLKTTG---SKRNEAMRICTSL-----LPESQFPDLEKRLQMLN 434 (437)
T ss_dssp CSSSEEEEEET--TCCHHHHHHHHHHTTEECEESTTTT---CCCTTCEEEECSS-----SCGGGHHHHHHHHHHHH
T ss_pred ceeEEEEEecC--CCCHHHHHHHHHHcCeEEeeccccC---CCCCCEEEEEEec-----CCHHHHHHHHHHHHHHH
Confidence 45678889986 7889999999999999987422221 2223679997542 36789998888877665
No 13
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=91.96 E-value=0.76 Score=38.94 Aligned_cols=81 Identities=14% Similarity=0.127 Sum_probs=60.1
Q ss_pred CCeeeeCCCccceeeEeccC-CCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKN-KGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~-~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~ 80 (144)
|++++..+.+.+++.+.+.+ .+++..++.+.|.+.||.+.....|.... ....+||++. ...+++|++.+.+-
T Consensus 363 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~p~~~~--~~~~lRisv~----~~~t~edid~li~~ 436 (502)
T 3hbx_A 363 RFNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPNAQ--HITVLRVVIR----EDFSRTLAERLVID 436 (502)
T ss_dssp CEEECSCSSSSSEEEEEESSCSSCCHHHHHHHHHTTTCBCCEEECCTTCT--TCEEEEEECC----TTCCHHHHHHHHHH
T ss_pred CEEEEeCCCCceEEEEEecCCCcCCHHHHHHHHHhCCcEEeeccCCcccC--CceEEEEEeC----CCCCHHHHHHHHHH
Confidence 47777655678899998865 35788899999999999997666664421 1246999864 34567899999988
Q ss_pred HHHHHHhh
Q 032257 81 FDAAVKLT 88 (144)
Q Consensus 81 i~~~l~~~ 88 (144)
|.+++...
T Consensus 437 L~~~l~~l 444 (502)
T 3hbx_A 437 IEKVMREL 444 (502)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88888643
No 14
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=91.96 E-value=0.79 Score=35.72 Aligned_cols=60 Identities=13% Similarity=0.095 Sum_probs=44.9
Q ss_pred ccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
..+++++++.. +..++.+.|.+.||.+. ...++ .++.+||+.. +++|++++.+.|.+++.
T Consensus 291 ~~~~~~~~~~~---~~~~~~~~l~~~gi~v~-g~~~~-----~~~~iRis~~-------~~~~i~~~~~~l~~~l~ 350 (354)
T 3ly1_A 291 EGNFVFHQLVV---PLKDYQTHMADAGVLIG-RAFPP-----ADNWCRISLG-------TPQEMQWVADTMREFRK 350 (354)
T ss_dssp CSSEEEEECSS---CHHHHHHHHHHTTEECC-CCCTT-----CTTEEEEECC-------CHHHHHHHHHHHHHHHH
T ss_pred CceEEEEECCC---CHHHHHHHHHHCCEEEe-ecCCC-----CCCEEEEEcC-------CHHHHHHHHHHHHHHHH
Confidence 44568888764 78889999999999987 33322 2467999953 57899998888887764
No 15
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=91.11 E-value=0.74 Score=36.09 Aligned_cols=67 Identities=16% Similarity=0.123 Sum_probs=46.8
Q ss_pred ccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
..+++++.+.. ..++.+.|.+.||.+.. +......++.+||+....+.+..+++|++++.+.|.+++
T Consensus 315 ~~~~~~~~~~~----~~~~~~~l~~~gi~v~~----g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~ 381 (385)
T 2bkw_A 315 AHGLTAVYVAD----PPDVIAFLKSHGVVIAG----GIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLAL 381 (385)
T ss_dssp CSSCEEEECSC----HHHHHHHHHHTTEECBC----CCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHT
T ss_pred CCceEEEecCC----HHHHHHHHHHCCeEEeC----CCCcccCCCEEEEEccccccccCCHHHHHHHHHHHHHHH
Confidence 47888888752 77788888889998863 221112245799994334445567899999998887765
No 16
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=90.85 E-value=1.1 Score=35.22 Aligned_cols=66 Identities=20% Similarity=0.270 Sum_probs=46.4
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|++++. .+.+++++++.. +..++.+.|.+.||.+..-..++. ++.+||+.. +++|++++.+.+
T Consensus 297 g~~~~~--~~~~~~~~~~~~---~~~~~~~~l~~~gi~v~~g~~~~~-----~~~iRis~~-------~~~~i~~~~~~l 359 (363)
T 3ffh_A 297 KVKLYP--ANGNFVLIDLGI---EAGTIFSYLEKNGYITRSGAALGF-----PTAVRITIG-------KEEDNSAVIALL 359 (363)
T ss_dssp TCEECC--CCSSEEEEECSS---CHHHHHHHHHHTTEECEETTTTTC-----TTEEEEECC-------CHHHHHHHHHHH
T ss_pred CceECC--CCCeEEEEECCC---CHHHHHHHHHHCCeEEEeCccCCC-----CCeEEEECC-------CHHHHHHHHHHH
Confidence 455543 334568888764 788899999999999875333321 467999954 788888888777
Q ss_pred HHH
Q 032257 82 DAA 84 (144)
Q Consensus 82 ~~~ 84 (144)
.++
T Consensus 360 ~~~ 362 (363)
T 3ffh_A 360 EKL 362 (363)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 17
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=90.63 E-value=1.2 Score=35.79 Aligned_cols=77 Identities=8% Similarity=0.016 Sum_probs=48.4
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhh------cCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEA------VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFA 75 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~------~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~ 75 (144)
|++++.......++++++. +.+..++.+.|.+ .||.+..-...+...+..++.+||+.. .+++|+.
T Consensus 318 g~~~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~------~~~e~i~ 389 (409)
T 2gb3_A 318 GLKRFTKPSGAFYITAELP--VEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV------LEKDLLS 389 (409)
T ss_dssp TCCCBCCCSBSSEEEEECS--SSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC------SCHHHHH
T ss_pred CceeeeCCCeeEEEEEEeC--CCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC------CCHHHHH
Confidence 4454122333566777875 5678877777765 499987532222111223467999865 5778898
Q ss_pred HHHHHHHHHHH
Q 032257 76 KVAYFFDAAVK 86 (144)
Q Consensus 76 ~ia~~i~~~l~ 86 (144)
++.+.|.+++.
T Consensus 390 ~~~~~l~~~l~ 400 (409)
T 2gb3_A 390 RAIDVLMEGLK 400 (409)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888877774
No 18
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=90.43 E-value=1.3 Score=35.01 Aligned_cols=65 Identities=17% Similarity=0.176 Sum_probs=47.3
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|++++ ..+.+++++++. .+..++.+.|.+.||.+... . .++.+||+.. +++|++++.+.+
T Consensus 302 g~~~~--~~~~~~~~~~~~---~~~~~l~~~l~~~gi~v~~~----~----~~~~iRis~~-------~~~~i~~~~~~l 361 (369)
T 3cq5_A 302 GYAVV--PSESNFVFFGDF---SDQHAAWQAFLDRGVLIRDV----G----IAGHLRTTIG-------VPEENDAFLDAA 361 (369)
T ss_dssp TCEEE--CCSSSEEEEECC---SSHHHHHHHHHHTTEECBCC----S----CTTEEEEECC-------CHHHHHHHHHHH
T ss_pred CCEEC--CCCCeEEEEECC---CCHHHHHHHHHHCCEEEEEC----C----CCCeEEEEeC-------CHHHHHHHHHHH
Confidence 55555 245578888874 47888888999999998642 1 1357999975 578898888888
Q ss_pred HHHHH
Q 032257 82 DAAVK 86 (144)
Q Consensus 82 ~~~l~ 86 (144)
.+++.
T Consensus 362 ~~~~~ 366 (369)
T 3cq5_A 362 AEIIK 366 (369)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 77663
No 19
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=89.20 E-value=1.3 Score=34.43 Aligned_cols=63 Identities=16% Similarity=0.253 Sum_probs=46.7
Q ss_pred CccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 10 TENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 10 Td~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
...+++++++...++++.++.+.|.+.||.+.. +. .+.|||... .+.+++|++++.+.|.+++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~----~~-----~~~iRl~~~----~~~~~e~i~~~~~~l~~~l 343 (347)
T 1jg8_A 281 VKTNMVILRTDNLKVNAHGFIEALRNSGVLANA----VS-----DTEIRLVTH----KDVSRNDIEEALNIFEKLF 343 (347)
T ss_dssp CCSSEEEEECTTSSSCHHHHHHHHHHHTEECEE----EE-----TTEEEEECC----TTSCHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEcccccCCHHHHHHHHHHCCCEEec----CC-----CCeEEEEeC----CCCCHHHHHHHHHHHHHHH
Confidence 456788898864467888998999899999873 21 246999642 2468899999988887765
No 20
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=89.04 E-value=1.4 Score=34.99 Aligned_cols=66 Identities=12% Similarity=0.100 Sum_probs=47.7
Q ss_pred cceeeEeccCCCCCHHHHHHHH-hhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~L-e~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
..++++++...+++..++.+.| ++.||.+..-..++ +..++.|||+... +++|+++..+.|.+++.
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRis~~~------~~~~i~~~~~~l~~~~~ 403 (407)
T 3nra_A 337 GSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPGTEFS---PHTADSVRLNFSQ------DHEAAVAAARRIVTLVE 403 (407)
T ss_dssp SSEECCBCCCBSSCHHHHHHHHHHHHCEECEEGGGTC---TTCTTBEEEECCS------CHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCCCHHHHHHHHHHhCCEEEeCchhhC---CCCCCEEEEEeCC------CHHHHHHHHHHHHHHHH
Confidence 4677888876677888888877 56899998644333 2234689999642 68888888888877764
No 21
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=88.60 E-value=2.9 Score=33.21 Aligned_cols=77 Identities=13% Similarity=0.055 Sum_probs=50.6
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|++++. .....++++++.. +++..++.+.|.+.||.+......+. .+..++.+||+.... +++|+++..+.|
T Consensus 315 g~~~~~-~~~g~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~f~~-~~~~~~~iRis~~~~-----~~~~i~~~~~~l 386 (397)
T 2zyj_A 315 EVRYTR-PKGGMFVWMELPK-GLSAEGLFRRALEENVAFVPGGPFFA-NGGGENTLRLSYATL-----DREGIAEGVRRL 386 (397)
T ss_dssp TSEECC-CSBSSEEEEECST-TCCHHHHHHHHHHTTEEEEESGGGCT-TSCCTTEEEEECSSS-----CHHHHHHHHHHH
T ss_pred CeEEcc-CCccEEEEEEcCC-CCCHHHHHHHHHHCCCEEechHHhcC-CCCCCCeEEEEcCCC-----CHHHHHHHHHHH
Confidence 455542 2235678888754 67888888888888999975332111 111246799996543 688998888888
Q ss_pred HHHHH
Q 032257 82 DAAVK 86 (144)
Q Consensus 82 ~~~l~ 86 (144)
.+++.
T Consensus 387 ~~~l~ 391 (397)
T 2zyj_A 387 GRALK 391 (397)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77763
No 22
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=88.31 E-value=2.8 Score=33.82 Aligned_cols=70 Identities=16% Similarity=0.056 Sum_probs=49.8
Q ss_pred ccceeeEeccCCCCCHHHHHHHHhhcCceeecccCC--CCCC---CCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVP--GDVS---AMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP--~d~~---~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
...++++++...++++.++.+.|.+.||.+..-... +... +...+.|||+... +++|+++..+.|.+++
T Consensus 364 ~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~------~~e~i~~~l~~l~~~~ 437 (444)
T 3if2_A 364 GAIFLWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA------DEQTLIDGIKVIGEVV 437 (444)
T ss_dssp BSSEEEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS------CHHHHHHHHHHHHHHH
T ss_pred ccEEEEEEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC------CHHHHHHHHHHHHHHH
Confidence 356778888766789999999999999999853322 2111 1123579999753 6788888888887776
Q ss_pred H
Q 032257 86 K 86 (144)
Q Consensus 86 ~ 86 (144)
.
T Consensus 438 ~ 438 (444)
T 3if2_A 438 R 438 (444)
T ss_dssp H
T ss_pred H
Confidence 4
No 23
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=88.22 E-value=0.7 Score=41.81 Aligned_cols=72 Identities=15% Similarity=0.104 Sum_probs=51.9
Q ss_pred CCCeeeeCCC---ccceeeEeccCCCCCH---------HHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcC
Q 032257 1 MGYELVSGGT---ENHLVLVNLKNKGIDG---------SRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRG 68 (144)
Q Consensus 1 ~G~~vv~ggT---d~Hlvlvdl~~~gi~g---------~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG 68 (144)
+||+.+..|+ |.+.+.+++.+.|++| ..+++.|++.||.+.++ .+..+|+- ++-|
T Consensus 519 h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~~---------~~~~v~~~----~~~g 585 (755)
T 2vyc_A 519 HGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRT---------TDFQIMFL----FSMG 585 (755)
T ss_dssp TCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSEE---------CSSEEEEE----CCTT
T ss_pred ccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEeec---------CCCeEEEE----ECCC
Confidence 3667776665 8899999987655555 99999999999999874 12446665 3556
Q ss_pred CCHHHHHHHHHHHHHHH
Q 032257 69 FVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 69 ~~e~dm~~ia~~i~~~l 85 (144)
-+++++..+.+-+.+..
T Consensus 586 ~t~~~~~~l~~al~~~~ 602 (755)
T 2vyc_A 586 VTRGKWGTLVNTLCSFK 602 (755)
T ss_dssp CCTTTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 67788887776665554
No 24
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=88.13 E-value=2.8 Score=32.71 Aligned_cols=74 Identities=9% Similarity=0.055 Sum_probs=48.5
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHh-hcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLE-AVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le-~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~ 80 (144)
|++++. ...+.++++++...++++.++.+.|. +.||.+......+. ..++.+||+.. ..++++.+..+.
T Consensus 308 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~~~iRi~~~------~~~~~i~~~l~~ 377 (383)
T 3kax_A 308 TLSVMK-PEGSFLLWIDCSALNLSQDERTKLLEEKGKIIVEPGEKYGL---GGEEHIGINIG------CPRSVLEEILNR 377 (383)
T ss_dssp TCEECC-CSBSSEEEEECGGGCCCHHHHHHHHHHTSCEECEESGGGCT---TCTTEEEEECS------SCHHHHHHHHHH
T ss_pred CceEec-CCceEEEEEEccccCCCHHHHHHHHHhhCCEEeECchhhcC---CCCCeEEEEEc------CCHHHHHHHHHH
Confidence 455542 23344556998877788988888885 89999875322221 12467999855 267888887777
Q ss_pred HHHHH
Q 032257 81 FDAAV 85 (144)
Q Consensus 81 i~~~l 85 (144)
|.+++
T Consensus 378 l~~~l 382 (383)
T 3kax_A 378 LRHTF 382 (383)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 76654
No 25
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=88.11 E-value=1.8 Score=34.02 Aligned_cols=75 Identities=12% Similarity=0.068 Sum_probs=50.3
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHH-hhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~L-e~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~ 80 (144)
|++++. ...+.++++++...++++.++.+.| ++.||.+......+. ..++.+||+.. ..++++.+..+.
T Consensus 312 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~~~iRis~~------~~~~~i~~~l~~ 381 (391)
T 3dzz_A 312 EVKVLD-SNASYLAWVDISALGMNAEDFCKYLREKTGLIISAGNGYRG---NGHEFVRINLA------CPKELVIDGMQR 381 (391)
T ss_dssp TSEECC-CCBSSEEEEECGGGCSCHHHHHHHHHHHHCEECEESGGGCT---TGGGEEEEECC------SCHHHHHHHHHH
T ss_pred CcEEec-cCceEEEEEehhhcCCCHHHHHHHHHHhCCEEEeCchhhCC---CCCCEEEEEec------CCHHHHHHHHHH
Confidence 455543 2334556788877678899988888 699999875322111 12357999855 357888888888
Q ss_pred HHHHHH
Q 032257 81 FDAAVK 86 (144)
Q Consensus 81 i~~~l~ 86 (144)
|.+++.
T Consensus 382 l~~~l~ 387 (391)
T 3dzz_A 382 LKQGVL 387 (391)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777764
No 26
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=87.93 E-value=2.4 Score=33.69 Aligned_cols=70 Identities=9% Similarity=-0.013 Sum_probs=49.5
Q ss_pred ccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCC--CCC--CCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV--SAM--VPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~--~~~--~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
...++++++...+++..++.+.|.+.||.+..-...+.. .+. .++.|||+... +++|+++..+.|.+++.
T Consensus 338 ~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~------~~~~i~~~~~~l~~~l~ 411 (417)
T 3g7q_A 338 GAIFLWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP------EPDKIEAGVKILAEEIE 411 (417)
T ss_dssp BSSEEEEECTTCSSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS------CHHHHHHHHHHHHHHHH
T ss_pred cceEEEEEcCCCCCCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC------CHHHHHHHHHHHHHHHH
Confidence 456788898766789999999999999998753322111 100 13579998642 78899988888877774
No 27
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=87.20 E-value=2 Score=33.08 Aligned_cols=64 Identities=11% Similarity=0.031 Sum_probs=46.1
Q ss_pred cceeeEeccC-CCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKN-KGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 12 ~Hlvlvdl~~-~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
.+++++++.. .+++..++.+.|.+.||.+..... +.+..|||+.... .+++|++++.+.|.+++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~------~~~~~iRi~~~~~----~~~~~i~~~~~~l~~~~ 362 (366)
T 1m32_A 298 PIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKV------SQSDCFRIGNIGE----VYAADITALLTAIRTAM 362 (366)
T ss_dssp SSEEEEECCCCTTCCHHHHHHHHHHTTEECEECCC------SSSCEEEEECCSS----CCHHHHHHHHHHHHHHC
T ss_pred ceEEEEEcCccCCCCHHHHHHHHHHCCEEEECCcC------CCCCEEEEecCCC----CCHHHHHHHHHHHHHHH
Confidence 4578888753 167888898889888999864221 1346799997654 35799999888887765
No 28
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=87.07 E-value=1 Score=35.88 Aligned_cols=76 Identities=18% Similarity=0.223 Sum_probs=51.5
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|++++ ....+++++++.. +.+..++.+.|.+.||.+.....|+.+. ..+.+||+.... .+++|++++.+.|
T Consensus 320 g~~~~--~~~~~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~~~~~~~~~--~~~~iRi~~~~~----~~~~~i~~~~~~l 390 (401)
T 1fc4_A 320 GFTLA--GADHAIIPVMLGD-AVVAQKFARELQKEGIYVTGFFYPVVPK--GQARIRTQMSAA----HTPEQITRAVEAF 390 (401)
T ss_dssp TCCBC--CSSSSEEEEEEEC-HHHHHHHHHHHHHTTEECCEECTTSSCT--TCEEEEEECCTT----CCHHHHHHHHHHH
T ss_pred CCccc--CCCCCEEEEEcCC-hHHHHHHHHHHHHCCcEEeeecCCCCCC--CCceEEEEeCCC----CCHHHHHHHHHHH
Confidence 45555 3577899998853 3456677778888899998654443221 124699996533 4579999988888
Q ss_pred HHHHH
Q 032257 82 DAAVK 86 (144)
Q Consensus 82 ~~~l~ 86 (144)
.+++.
T Consensus 391 ~~~~~ 395 (401)
T 1fc4_A 391 TRIGK 395 (401)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77764
No 29
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=87.04 E-value=3.2 Score=31.77 Aligned_cols=75 Identities=17% Similarity=0.212 Sum_probs=49.6
Q ss_pred CCeeeeCC-CccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHH-HHHH
Q 032257 2 GYELVSGG-TENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFA-KVAY 79 (144)
Q Consensus 2 G~~vv~gg-Td~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~-~ia~ 79 (144)
|++++... .-++++++++. .+++..++.+.|.+.||.+..-..+. .++.+||+....+ +++|+. ++.+
T Consensus 275 g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~g~~~~-----~~~~iRi~~~~~~----~~~~~~~~~~~ 344 (353)
T 2yrr_A 275 GFRPYPKASPLPTVLVVRPP-EGVDADRLVRALYAEGVAVAGGIGPT-----RGQVLRLGLMGEG----ARREAYQAFLK 344 (353)
T ss_dssp TCEESCSSSBCTTEEEEECC-TTCCHHHHHHHHHHTTEECEECCGGG-----TTTCEEEECSGGG----SCHHHHHHHHH
T ss_pred CCccccCccCCCeEEEEECC-CCCCHHHHHHHHHHCCEEEeCCcccc-----CCCeEEEecCccC----CHHHHHHHHHH
Confidence 45555421 24677778763 46788999999988999987433221 2357999974433 357887 8888
Q ss_pred HHHHHHH
Q 032257 80 FFDAAVK 86 (144)
Q Consensus 80 ~i~~~l~ 86 (144)
.|.+++.
T Consensus 345 ~l~~~l~ 351 (353)
T 2yrr_A 345 ALDRALA 351 (353)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7777664
No 30
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=86.97 E-value=3.1 Score=32.32 Aligned_cols=64 Identities=17% Similarity=0.097 Sum_probs=47.4
Q ss_pred cceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHHh
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 87 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~~ 87 (144)
.+++++.+.. .+..++.+.|.+.||.+.. +...+. ..|||+.... .+++|++++.+.|.+++..
T Consensus 299 ~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~----g~~~~~--~~iRi~~~~~----~~~e~i~~~~~~l~~~l~~ 362 (384)
T 3zrp_A 299 NTVTGVILKV--ADPQKVLAGTVNEGVEFAP----GVHPAF--KYFRIGHMGW----VTPNDAIIAISVIERTLRK 362 (384)
T ss_dssp SSEEEEECSS--SCHHHHHHHHHTTTCCCEE----CCCTTC--CEEEEECCSS----CCHHHHHHHHHHHHHHHHH
T ss_pred ccEEEEECCC--CCHHHHHHHHHHCCEEEec----CCCCCc--CEEEEecccc----CCHHHHHHHHHHHHHHHHH
Confidence 5677787754 6888999999888999873 331111 6799996543 4679999999999988853
No 31
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=86.86 E-value=1.5 Score=34.71 Aligned_cols=75 Identities=12% Similarity=0.256 Sum_probs=49.1
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHh-hcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLE-AVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le-~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~ 80 (144)
|++++. ...+.++++++...+++..++.+.|. +.||.+.....++.. .++.+||+... +++++.+..+.
T Consensus 309 g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~---~~~~iRi~~~~------~~~~i~~~l~~ 378 (389)
T 1gd9_A 309 GLPTVK-PKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKA---GEGYVRISYAT------AYEKLEEAMDR 378 (389)
T ss_dssp TCCCCC-CCBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGG---GTTBEEEECCS------CHHHHHHHHHH
T ss_pred CCeecC-CCeeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCC---CCCeEEEEecC------CHHHHHHHHHH
Confidence 444442 22355677887654678888888875 999998754332211 23579999652 67888888887
Q ss_pred HHHHHH
Q 032257 81 FDAAVK 86 (144)
Q Consensus 81 i~~~l~ 86 (144)
|.+++.
T Consensus 379 l~~~~~ 384 (389)
T 1gd9_A 379 MERVLK 384 (389)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777664
No 32
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=86.79 E-value=1.7 Score=34.06 Aligned_cols=75 Identities=20% Similarity=0.245 Sum_probs=48.8
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|++++. ...+.++++++...+++...+++++++.||.+......+.. .++.+||+.. ..++++.+..+.|
T Consensus 300 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~---~~~~~Ris~~------~~~e~i~~~l~~l 369 (377)
T 3fdb_A 300 GAKITP-MQATYLMWIDFRDTTIEGSPSEFFIEKAKVAMNDGAWFGED---GTGFCRLNFA------TSREVLEEAIDRM 369 (377)
T ss_dssp TCEECC-CSBCSEEEEECTTSCCCSCHHHHHHHHHCEECEEGGGGCGG---GTTEEEEECC------SCHHHHHHHHHHH
T ss_pred CceEec-CCeeEEEEEECcccCCCHHHHHHHHHhCCEEecCChhccCC---CCCEEEEEeC------CCHHHHHHHHHHH
Confidence 455542 22344557998776677667788888889998753222211 2467999855 2578888888877
Q ss_pred HHHHH
Q 032257 82 DAAVK 86 (144)
Q Consensus 82 ~~~l~ 86 (144)
.+++.
T Consensus 370 ~~~l~ 374 (377)
T 3fdb_A 370 AKAVS 374 (377)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 77663
No 33
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=86.59 E-value=2.7 Score=33.23 Aligned_cols=72 Identities=13% Similarity=0.082 Sum_probs=47.6
Q ss_pred eCCCccceeeEeccCCCCCHHHHHHH-HhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 7 SGGTENHLVLVNLKNKGIDGSRVEKV-LEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 7 ~ggTd~Hlvlvdl~~~gi~g~~~~~~-Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
.....+.++++++...+.++.++.+. +++.||.+..-.-.+. +..++.|||+... .++|+++..+.|.+++
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~~~~iRis~~~------~~~~i~~~l~~l~~~~ 379 (391)
T 3h14_A 308 APPDGAFYVYADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDP--ERGAGTLRFSYAR------ATADIEEGLDRLEAFM 379 (391)
T ss_dssp CCCCBTTEEEEECTTTCSCHHHHHHHHHHHHCEECEEGGGTCT--TTGGGEEEEECCS------CHHHHHHHHHHHHHHH
T ss_pred cCCCeeEEEEEecCccCCCHHHHHHHHHHHCCEEEcCchhhCC--CCCCCeEEEEecC------CHHHHHHHHHHHHHHH
Confidence 33444677888887667788877666 5667999875332222 1224579998543 5688888887777766
Q ss_pred H
Q 032257 86 K 86 (144)
Q Consensus 86 ~ 86 (144)
.
T Consensus 380 ~ 380 (391)
T 3h14_A 380 Q 380 (391)
T ss_dssp H
T ss_pred H
Confidence 4
No 34
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=86.57 E-value=3.4 Score=33.32 Aligned_cols=71 Identities=21% Similarity=0.334 Sum_probs=46.8
Q ss_pred ceeeEeccC--CCCCHHHHHHHHhhcCceeecccCCC-CC-CCCC-------CCc-------eeecchhhhhcCCCHHHH
Q 032257 13 HLVLVNLKN--KGIDGSRVEKVLEAVHIAANKNTVPG-DV-SAMV-------PGG-------IRMGTPALTSRGFVEEDF 74 (144)
Q Consensus 13 Hlvlvdl~~--~gi~g~~~~~~Le~~gI~vnkn~lP~-d~-~~~~-------~sg-------iRlGT~a~TtRG~~e~dm 74 (144)
|++.+++.. .+++..++.+.|.+.||.+....-|. .. +.+. +.. |||+. ...++++|+
T Consensus 297 ~~~~i~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~----~~~~t~e~i 372 (424)
T 2po3_A 297 QYVIVEIDEATTGIHRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPT----GTAIGDDDI 372 (424)
T ss_dssp CCEEEEECHHHHSSCHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECC----STTCCHHHH
T ss_pred EEEEEEECCccchhhHHHHHHHHHHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeC----CCCCCHHHH
Confidence 677677653 25788999999999999997522211 00 1110 111 66663 356789999
Q ss_pred HHHHHHHHHHHHh
Q 032257 75 AKVAYFFDAAVKL 87 (144)
Q Consensus 75 ~~ia~~i~~~l~~ 87 (144)
+++.+.|.+++..
T Consensus 373 ~~~~~~L~~~~~~ 385 (424)
T 2po3_A 373 RRVADLLRLCATR 385 (424)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 9999999888754
No 35
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=86.16 E-value=2.8 Score=33.51 Aligned_cols=64 Identities=16% Similarity=0.188 Sum_probs=45.6
Q ss_pred cceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
++++++++.. ++++.++.+.|.+.||.+.. +.. ....+.|||+.... .+++|++++.+.|.+++
T Consensus 332 ~~~~~~~~~~-~~~~~~l~~~L~~~gI~v~~----g~~-~~~~~~iRis~~~~----~t~e~i~~~~~~l~~~l 395 (398)
T 2fyf_A 332 QVVGTIDFVD-DVDAGTVAKILRANGIVDTE----PYR-KLGRNQLRVAMFPA----VEPDDVSALTECVDWVV 395 (398)
T ss_dssp SSEEEEEECT-TSCHHHHHHHHHHTTCBCCS----CCT-TTCSSEEEEECCTT----SCHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCC-CCCHHHHHHHHHHCCcEEec----Ccc-cCCCCEEEEEecCC----CCHHHHHHHHHHHHHHH
Confidence 3488888743 77888998889888999863 111 11235799997653 35799998888887765
No 36
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=86.15 E-value=4.3 Score=31.76 Aligned_cols=74 Identities=15% Similarity=0.162 Sum_probs=47.8
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhc-CceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAV-HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~-gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~ 80 (144)
|+.++. ...+.++++++...+++..++.+.|.+. ||.+..-...+. ...+.+||+.. ..++++.+..+.
T Consensus 316 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~~~iRis~~------~~~~~i~~~l~~ 385 (391)
T 4dq6_A 316 KLKVRK-PEGTYLLWVDFSALGLSDEELESILVQKGKVALNQGNSFGI---GGSGYQRINLA------CPRSMLEEALIR 385 (391)
T ss_dssp TSEECC-CSBSSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCT---TCTTEEEEECC------SCHHHHHHHHHH
T ss_pred CCEecC-CCccEEEEEEhhhcCCCHHHHHHHHHHhCCEEeeCchhhCC---CCCCeEEEEEc------CCHHHHHHHHHH
Confidence 444442 2334555688876677888888888776 999875322111 12467999865 356888887777
Q ss_pred HHHHH
Q 032257 81 FDAAV 85 (144)
Q Consensus 81 i~~~l 85 (144)
|.+++
T Consensus 386 l~~~l 390 (391)
T 4dq6_A 386 IKNAI 390 (391)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 76655
No 37
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=86.00 E-value=1.3 Score=34.77 Aligned_cols=62 Identities=16% Similarity=0.110 Sum_probs=42.9
Q ss_pred cceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
.+.+++.+.. +.++.++.+.|.+.||.+- |+... +++|||+....+ +++|++.+.+.|.+++
T Consensus 297 ~~~~~~~~~~-~~~~~~~~~~L~~~gi~~~----~g~~~---~~~iRis~~~~~----~~e~i~~l~~~l~~~~ 358 (362)
T 2c0r_A 297 DMNITFRLAS-EELEKEFVKASEQEGFVGL----KGHRS---VGGLRASIYNAV----PYESCEALVQFMEHFK 358 (362)
T ss_dssp SSEEEEECSC-HHHHHHHHHHHHHTTEESC----BCCTT---TCSEEEECCTTS----CHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCC-cchHHHHHHHHHHCCCeec----cCCCC---CCEEEEECCCCC----CHHHHHHHHHHHHHHH
Confidence 3556676642 4567788889999999652 44322 357999976543 3799999988887665
No 38
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=85.57 E-value=2.2 Score=35.28 Aligned_cols=70 Identities=9% Similarity=0.118 Sum_probs=49.0
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|+++++. ....++.++ ..++++.++.+.|.+.||.++.... ++++||+.. . .+++|++++.+.+
T Consensus 367 g~~~~~~-~~~~~v~~~--~~~~~~~~l~~~L~~~Gi~v~~~~~--------~~~~ri~~~-~----~t~e~i~~~~~~L 430 (497)
T 3mc6_A 367 DLDIMGN-PRYSVISFS--SKTLNIHELSDRLSKKGWHFNALQK--------PVALHMAFT-R----LSAHVVDEICDIL 430 (497)
T ss_dssp TCEECSC-CCSSEEEEE--CTTTTHHHHHHHHHTTTCBCEECCS--------SCCEEEECC-T----TTTCTHHHHHHHH
T ss_pred CEEEecC-CCeeEEEEe--CCCCCHHHHHHHHHhCCEEEecCCC--------CCeEEEEEe-C----CCHHHHHHHHHHH
Confidence 6676643 233344444 4578899999999999999875322 347899876 2 3568888888888
Q ss_pred HHHHHh
Q 032257 82 DAAVKL 87 (144)
Q Consensus 82 ~~~l~~ 87 (144)
.+++..
T Consensus 431 ~~~l~~ 436 (497)
T 3mc6_A 431 RTTVQE 436 (497)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887754
No 39
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=85.49 E-value=2.4 Score=32.97 Aligned_cols=67 Identities=13% Similarity=0.084 Sum_probs=47.1
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|++++.. ...+++++++. ++.++.+.|.+.||.+..... ++.|||+.... .+++|++++.+.|
T Consensus 329 g~~~~~~-~~~~~~~~~~~----~~~~~~~~l~~~gi~v~~~~~--------~~~~Ri~~~~~----~~~e~i~~~~~~l 391 (397)
T 3f9t_A 329 NFKPVIE-PILNIVAIEDE----DYKEVCKKLRDRGIYVSVCNC--------VKALRIVVMPH----IKREHIDNFIEIL 391 (397)
T ss_dssp TCCBSSC-CSSSEEEEECT----THHHHHHHHHHTTCBCEECSS--------SSEEEEECCTT----CCHHHHHHHHHHH
T ss_pred CCEEEcC-CCccEEEEEeC----CHHHHHHHHHhCCeEEeccCC--------CCEEEEEEcCC----CCHHHHHHHHHHH
Confidence 4454433 45778888765 277888888888998875321 36899987633 3579999888888
Q ss_pred HHHH
Q 032257 82 DAAV 85 (144)
Q Consensus 82 ~~~l 85 (144)
.+++
T Consensus 392 ~~~l 395 (397)
T 3f9t_A 392 NSIK 395 (397)
T ss_dssp HHHC
T ss_pred HHhh
Confidence 7765
No 40
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=85.44 E-value=1.7 Score=34.19 Aligned_cols=76 Identities=18% Similarity=0.174 Sum_probs=50.8
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|++++ ..+.+++++.+.. +.+..++.+.|.+.||.+.....|.. +...+.+||+... ..+++|++++.+.|
T Consensus 319 g~~~~--~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~~~~~~~--~~~~~~iRi~~~~----~~~~~~i~~~~~~l 389 (399)
T 3tqx_A 319 GFQLV--PGNHPIIPVMLGD-AQLATNMADHLLQEGIYVVGFSYPVV--PMGKARIRVQMSA----VHTQQQLDRAIEAF 389 (399)
T ss_dssp TCCBC--CCSSSEEEEEEEC-HHHHHHHHHHHHHTTEECCEECTTTS--CTTCEEEEEECCT----TCCHHHHHHHHHHH
T ss_pred CCCcC--CCCCCEEEEEeCC-HHHHHHHHHHHHHCCCEEeeeCCCCC--CCCCceEEEEeec----CCCHHHHHHHHHHH
Confidence 45554 4566788888753 23566777778888999884333221 1223579998654 45689999999888
Q ss_pred HHHHH
Q 032257 82 DAAVK 86 (144)
Q Consensus 82 ~~~l~ 86 (144)
.+++.
T Consensus 390 ~~~~~ 394 (399)
T 3tqx_A 390 GQVGK 394 (399)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88774
No 41
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=85.07 E-value=2.7 Score=35.02 Aligned_cols=76 Identities=17% Similarity=0.204 Sum_probs=51.9
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|++++.+++..|.+++++ ..+++..++.+.|.+.||.+.....| ....+.+||..... .+++|+.++.+.|
T Consensus 364 g~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~L~~~Gi~~~~~~~~----~~~~~~lRis~~~~----~t~e~id~~~~~L 434 (474)
T 1wyu_B 364 GYRVPYDGPSMHEFVAQP-PEGFRALDLAKGLLELGFHPPTVYFP----LIVKEALMVEPTET----EAKETLEAFAEAM 434 (474)
T ss_dssp TCBCSSCSSCCSCEEEBC-STTCCHHHHHHHHHHTTCCCCEESCS----TTSTTCEEECCCTT----SCHHHHHHHHHHH
T ss_pred CcEecCCCCcceEEEEEc-CCCCCHHHHHHHHHHCCccccccccc----cccCCEEEEEeecC----CCHHHHHHHHHHH
Confidence 566655555567678887 55778888988888889975322222 11245799986543 3578999988888
Q ss_pred HHHHH
Q 032257 82 DAAVK 86 (144)
Q Consensus 82 ~~~l~ 86 (144)
.+++.
T Consensus 435 ~~~~~ 439 (474)
T 1wyu_B 435 GALLK 439 (474)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 77764
No 42
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=84.79 E-value=5.7 Score=31.03 Aligned_cols=68 Identities=16% Similarity=0.280 Sum_probs=45.9
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|+.+. ....+++++.+. +.+..++.+.|.+.||.+.. +.. +..++.+||+.. .++|++++.+.+
T Consensus 285 ~~~~~--~~~~~~~~~~~~--~~~~~~l~~~l~~~gi~v~~----~~~-~~~~~~iRis~~-------~~~e~~~l~~al 348 (360)
T 3hdo_A 285 GYDVI--PSQGNYLFATPP--DRDGKRVYDGLYARKVLVRH----FSD-PLLAHGMRISIG-------TREEMEQTLAAL 348 (360)
T ss_dssp TCEEC--CCSSSEEEEECT--TCCHHHHHHHHHHTTEECBC----CCS-TTTTTSEEEECC-------CHHHHHHHHHHH
T ss_pred CCEEc--CCCccEEEEECC--CCCHHHHHHHHHHCCEEEEE----CCC-CCCCCEEEEEcC-------CHHHHHHHHHHH
Confidence 44543 234456777764 56889999999999999874 221 223467999954 778888887776
Q ss_pred HHHH
Q 032257 82 DAAV 85 (144)
Q Consensus 82 ~~~l 85 (144)
.++-
T Consensus 349 ~~~~ 352 (360)
T 3hdo_A 349 KEIG 352 (360)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5543
No 43
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=84.65 E-value=1.6 Score=34.70 Aligned_cols=75 Identities=12% Similarity=0.152 Sum_probs=48.1
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHH-hhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~L-e~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~ 80 (144)
|++++. .+.+++++++.. +.+..++.+.| ++.||.+.....|+.+ ...+.+||+.... .+++|++++.+.
T Consensus 322 g~~~~~--~~~~~~~~~~~~-~~~~~~~~~~L~~~~gi~v~~~~~~~~~--~~~~~iRis~~~~----~t~~~i~~~~~~ 392 (401)
T 2bwn_A 322 GMPIID--HGSHIVPVVIGD-PVHTKAVSDMLLSDYGVYVQPINFPTVP--RGTERLRFTPSPV----HDLKQIDGLVHA 392 (401)
T ss_dssp TCCBCC--CSSSCEEEECCC-HHHHHHHHHHHHHHHCEECCEECTTTSC--TTCCEEEECCCTT----SCHHHHHHHHHH
T ss_pred CCcccC--CCCCeEEEEeCC-hHHHHHHHHHHHhcCCEEEeecCCCCCC--CCCceEEEEeeCC----CCHHHHHHHHHH
Confidence 455542 345788998753 34566677777 6889999743332211 1124699997643 368999998888
Q ss_pred HHHHH
Q 032257 81 FDAAV 85 (144)
Q Consensus 81 i~~~l 85 (144)
|.+++
T Consensus 393 l~~~~ 397 (401)
T 2bwn_A 393 MDLLW 397 (401)
T ss_dssp HHHHC
T ss_pred HHHHH
Confidence 77765
No 44
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=84.31 E-value=1.4 Score=35.91 Aligned_cols=82 Identities=15% Similarity=0.151 Sum_probs=52.3
Q ss_pred CCeeeeCCCccceeeEe-------ccCCCCCHHHHHHHH-hhcCceeec-ccC-----C--CCCCCCCCCceeecchhhh
Q 032257 2 GYELVSGGTENHLVLVN-------LKNKGIDGSRVEKVL-EAVHIAANK-NTV-----P--GDVSAMVPGGIRMGTPALT 65 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvd-------l~~~gi~g~~~~~~L-e~~gI~vnk-n~l-----P--~d~~~~~~sgiRlGT~a~T 65 (144)
|++++ .....+.++++ +...++++.++.+.| .+.||.+.. -.. | +...+...+.|||..+..
T Consensus 343 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~- 420 (467)
T 1ax4_A 343 GIPIQ-YPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARR- 420 (467)
T ss_dssp TCCBC-SSCCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTT-
T ss_pred CCCcc-cCCCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccc-
Confidence 45544 33446788888 433345677778877 999999985 111 1 100111235799987643
Q ss_pred hcCCCHHHHHHHHHHHHHHHHh
Q 032257 66 SRGFVEEDFAKVAYFFDAAVKL 87 (144)
Q Consensus 66 tRG~~e~dm~~ia~~i~~~l~~ 87 (144)
.++++|++++.+.|.+++..
T Consensus 421 --~~t~e~i~~~~~~l~~~~~~ 440 (467)
T 1ax4_A 421 --VYTNDHMDYIADALIGLKEK 440 (467)
T ss_dssp --SSCHHHHHHHHHHHHTTHHH
T ss_pred --cCCHHHHHHHHHHHHHHHHh
Confidence 36789999999998887753
No 45
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=84.21 E-value=6.1 Score=31.18 Aligned_cols=71 Identities=15% Similarity=0.125 Sum_probs=47.8
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|++++. ...+.++++++.. .++.++.+.|.+.||.+..-..++. ++.+||+.. .+++++++..+.|
T Consensus 324 g~~~~~-~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g~~~~~-----~~~iRis~~------~~~e~i~~~l~~l 389 (398)
T 3ele_A 324 GYHCFK-PDGAFYMFVKALE--DDSNAFCEKAKEEDVLIVAADGFGC-----PGWVRISYC------VDREMIKHSMPAF 389 (398)
T ss_dssp TCCEEC-CSBSSEEEEECSS--SCHHHHHHHHHTTTEECEESGGGTC-----TTEEEEECC------SCHHHHHHHHHHH
T ss_pred CCeecC-CCeeEEEEEEcCC--CCHHHHHHHHHHCCEEEeCccccCC-----CCeEEEEec------CCHHHHHHHHHHH
Confidence 444443 2234457888753 3788888999999999975333221 357999852 4778888888887
Q ss_pred HHHHH
Q 032257 82 DAAVK 86 (144)
Q Consensus 82 ~~~l~ 86 (144)
.+++.
T Consensus 390 ~~~l~ 394 (398)
T 3ele_A 390 EKIYK 394 (398)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77664
No 46
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=84.20 E-value=3.4 Score=32.29 Aligned_cols=68 Identities=15% Similarity=0.223 Sum_probs=46.6
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|+.+.. ....++++++. ++.++.+.|.+.||.+..-.-.+ +..++.|||+.. +++|++++.+.|
T Consensus 298 g~~~~~--~~~~~~~~~~~----~~~~l~~~l~~~gi~v~~~~~~~---~~~~~~iRis~~-------~~~~i~~~~~~l 361 (367)
T 3euc_A 298 GVTVFP--SAANFLLARVP----DAAQTFDRLLARKVLIKNVSKMH---PLLANCLRVTVS-------TPEENAQFLEAF 361 (367)
T ss_dssp TCEECC--CSSSEEEEECS----CHHHHHHHHHTTTEECEECGGGC---GGGTTEEEEECC-------CHHHHHHHHHHH
T ss_pred CcEECC--CCCeEEEEECC----CHHHHHHHHHHCCeEEEECCccC---CCCCCEEEEecC-------CHHHHHHHHHHH
Confidence 455332 23456778875 78888999999999987422211 223467999953 789999988888
Q ss_pred HHHH
Q 032257 82 DAAV 85 (144)
Q Consensus 82 ~~~l 85 (144)
.+++
T Consensus 362 ~~~l 365 (367)
T 3euc_A 362 AASL 365 (367)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 7765
No 47
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=84.15 E-value=5.2 Score=31.12 Aligned_cols=66 Identities=15% Similarity=0.149 Sum_probs=47.7
Q ss_pred ccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
..+++++++. .+++..++.+.|.+.||.+....-| ..++.+||+... ..+++|++++.+.|.+++.
T Consensus 312 ~~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~~~~~-----~~~~~iRi~~~~----~~~~~~i~~~~~~l~~~~~ 377 (386)
T 2dr1_A 312 SPTITAVLTP-PGIKGDEVYEAMRKRGFELAKGYGS-----VKEKTFRIGHMG----YMKFEDIQEMLDNLREVIN 377 (386)
T ss_dssp CSSEEEEECC-TTCCHHHHHHHHHHTTEECEECCGG-----GTTTEEEEECCS----SCCHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEcC-CCCCHHHHHHHHHHCCeEEecCccc-----cCCCEEEEECCC----CCCHHHHHHHHHHHHHHHH
Confidence 4678888874 3667888888888889998754322 123579999754 2468999999888887774
No 48
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=83.97 E-value=2.1 Score=34.26 Aligned_cols=75 Identities=17% Similarity=0.231 Sum_probs=50.6
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|+++. ...+++++++... .+..++.+.|.+.||.+.....|..+ ...+.|||+.+. ..+++|++++.+.|
T Consensus 328 g~~~~---~~~~~~~~~~~~~-~~~~~~~~~L~~~Gv~v~~~~~~~~~--~~~~~iRi~~~~----~~t~e~i~~~~~~l 397 (409)
T 3kki_A 328 GLTIR---SESQIIGLETGDE-RNTEKVRDYLESNGVFGSVFCRPATS--KNKNIIRLSLNS----DVNDEQIAKIIEVC 397 (409)
T ss_dssp TCCCC---CSSSEEEEEEESH-HHHHHHHHHHHHTTEECEEECTTSSC--TTCEEEEEECCT----TCCHHHHHHHHHHH
T ss_pred CCccC---CCCCEEEEEeCCH-HHHHHHHHHHHHCCceEeeeCCCCcC--CCCcEEEEEccC----CCCHHHHHHHHHHH
Confidence 45555 3567888887532 24555667777779998765444332 224679999765 45679999999998
Q ss_pred HHHHH
Q 032257 82 DAAVK 86 (144)
Q Consensus 82 ~~~l~ 86 (144)
.+++.
T Consensus 398 ~~~l~ 402 (409)
T 3kki_A 398 SDAVN 402 (409)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88775
No 49
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=83.85 E-value=2.4 Score=33.45 Aligned_cols=79 Identities=15% Similarity=0.150 Sum_probs=51.6
Q ss_pred CCeeeeCC----CccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCC--CCCC-CCceeecchhhhhcCCCHHHH
Q 032257 2 GYELVSGG----TENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV--SAMV-PGGIRMGTPALTSRGFVEEDF 74 (144)
Q Consensus 2 G~~vv~gg----Td~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~--~~~~-~sgiRlGT~a~TtRG~~e~dm 74 (144)
|++++... ...+++++.+. +.+..++.+.|.+.||.+..-..+..+ ..+. ++.+||+.... .+++|+
T Consensus 326 g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~----~~~~~i 399 (420)
T 1t3i_A 326 QLRLYGPNPKHGDRAALASFNVA--GLHASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFY----NTKEEI 399 (420)
T ss_dssp TEEEESCCGGGSCBCSEEEEEET--TBCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTT----CCHHHH
T ss_pred CeEEeCCCccccccCCEEEEEEC--CCCHHHHHHHHHHCCeEEeeccccchHHHHhcCCCCeEEEecCCC----CCHHHH
Confidence 55555432 23678888875 467888999999999998643211100 0011 46799996532 478999
Q ss_pred HHHHHHHHHHHH
Q 032257 75 AKVAYFFDAAVK 86 (144)
Q Consensus 75 ~~ia~~i~~~l~ 86 (144)
+++.+.|.+++.
T Consensus 400 ~~~~~~l~~~~~ 411 (420)
T 1t3i_A 400 DLFLQSLQATIR 411 (420)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999998888774
No 50
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=83.35 E-value=8 Score=31.20 Aligned_cols=71 Identities=10% Similarity=0.002 Sum_probs=46.2
Q ss_pred CccceeeEeccCCCCCHHH-HHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 10 TENHLVLVNLKNKGIDGSR-VEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 10 Td~Hlvlvdl~~~gi~g~~-~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
....++|+++.. +.+..+ +.+.|.+.||.+..-...+.........+||+... .+++++++..+.|.+++.
T Consensus 351 ~~g~~~~~~~~~-~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~-----~~~~~i~~~~~~l~~~l~ 422 (425)
T 2r2n_A 351 AAGMFLWIKVKG-INDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS-----ASPEQMDVAFQVLAQLIK 422 (425)
T ss_dssp SBSSEEEEEETT-CSCCHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSS-----CCHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEeCC-CCCHHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCC-----CCHHHHHHHHHHHHHHHH
Confidence 345678889864 335555 68889999999975332221111123579999542 478999988888877663
No 51
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=83.05 E-value=3.7 Score=32.30 Aligned_cols=72 Identities=11% Similarity=0.072 Sum_probs=46.0
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHh-hcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLE-AVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le-~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~ 80 (144)
|++++. ...+.++++++...+.+..++.+.|. +.||.+..-...+. ++.+||+.. .+++++.+..+.
T Consensus 312 g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-----~~~iRis~~------~~~~~i~~~~~~ 379 (388)
T 1j32_A 312 GLECPK-PDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGA-----DDCIRLSYA------TDLDTIKRGMER 379 (388)
T ss_dssp TCBCCC-CCBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTC-----TTBEEEECC------SCHHHHHHHHHH
T ss_pred CCcccC-CCeeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhCC-----CCcEEEEec------CCHHHHHHHHHH
Confidence 455442 22345667777544677888877775 58999875322111 367999963 367888877777
Q ss_pred HHHHH
Q 032257 81 FDAAV 85 (144)
Q Consensus 81 i~~~l 85 (144)
|.+++
T Consensus 380 l~~~l 384 (388)
T 1j32_A 380 LEKFL 384 (388)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76665
No 52
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=82.93 E-value=6.4 Score=31.46 Aligned_cols=69 Identities=12% Similarity=0.094 Sum_probs=47.4
Q ss_pred ccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCC-CCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d-~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
...++++++.. + +...+.+.|.+.||.+....--+. .....++.|||+.... +++++++..+.|.+++.
T Consensus 344 ~g~~~~~~~~~-~-~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~-----~~~~i~~~~~~l~~~l~ 413 (423)
T 3ez1_A 344 GGYFISLDTAE-P-VADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRP-----PVEEVRTAMQVVAACIR 413 (423)
T ss_dssp BSSCEEEEESS-S-CHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSS-----CHHHHHHHHHHHHHHHH
T ss_pred ccEEEEEECCC-C-cHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCC-----CHHHHHHHHHHHHHHHH
Confidence 45577888864 3 788999999999999875221111 1112346799996332 57999998888888775
No 53
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=82.83 E-value=2.4 Score=34.18 Aligned_cols=74 Identities=9% Similarity=0.065 Sum_probs=48.0
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHH-hhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~L-e~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~ 80 (144)
|+.++. +..+.++|+++...+++..++.+.| +++||.++.-...+.. ..+.+||+.+ ..++++++..+.
T Consensus 345 ~i~~~~-~~~~~~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~---~~~~iRi~~~------~~~~~i~~~l~~ 414 (421)
T 3l8a_A 345 KIKVME-PEGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGKE---GKYFARLNVA------TPKNTVQEALSR 414 (421)
T ss_dssp SCEEEC-CSBSSEEEEECGGGTCCTTHHHHHHHHTTCEECEEGGGGCGG---GTTEEEEECC------SCHHHHHHHHHH
T ss_pred CceEeC-CCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEECchhhCCC---CCCEEEEEec------CCHHHHHHHHHH
Confidence 344443 3335566699887677787777777 6889999853322211 2357999855 357888887777
Q ss_pred HHHHH
Q 032257 81 FDAAV 85 (144)
Q Consensus 81 i~~~l 85 (144)
|.+++
T Consensus 415 l~~~l 419 (421)
T 3l8a_A 415 IISVF 419 (421)
T ss_dssp HHHHC
T ss_pred HHHHH
Confidence 76665
No 54
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=82.68 E-value=6 Score=30.93 Aligned_cols=79 Identities=14% Similarity=0.082 Sum_probs=51.5
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCC--CCC-CCCceeecchhhhhcCCCHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV--SAM-VPGGIRMGTPALTSRGFVEEDFAKVA 78 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~--~~~-~~sgiRlGT~a~TtRG~~e~dm~~ia 78 (144)
|++++......+++++++. +++..++.+.|.+.||.+..-.....+ ..+ .++.|||+.... .+++|++++.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~----~t~~~i~~~~ 395 (406)
T 1kmj_A 322 DLTLYGPQNRLGVIAFNLG--KHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMY----NTHEEVDRLV 395 (406)
T ss_dssp TEEEESCTTCCSEEEEEET--TCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTT----CCHHHHHHHH
T ss_pred CeEEecCCCcCCEEEEEEC--CCCHHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEeecC----CCHHHHHHHH
Confidence 4555532225778888874 567888999999999988642110000 000 136799997643 3689999999
Q ss_pred HHHHHHHH
Q 032257 79 YFFDAAVK 86 (144)
Q Consensus 79 ~~i~~~l~ 86 (144)
+.|.+++.
T Consensus 396 ~~l~~~~~ 403 (406)
T 1kmj_A 396 TGLQRIHR 403 (406)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98877764
No 55
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=82.09 E-value=4.2 Score=31.38 Aligned_cols=68 Identities=15% Similarity=0.201 Sum_probs=44.3
Q ss_pred ceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCC--C------C------CCCceeecchhhhhcCCCHHHHHHHH
Q 032257 13 HLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVS--A------M------VPGGIRMGTPALTSRGFVEEDFAKVA 78 (144)
Q Consensus 13 Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~--~------~------~~sgiRlGT~a~TtRG~~e~dm~~ia 78 (144)
|++.+.+. +.+..++.+.|.+.||.+..-...+... + + ..+.|||+.... .+++|++++.
T Consensus 290 ~~~~~~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~----~t~e~i~~~~ 363 (382)
T 4hvk_A 290 NNVNVRFS--YIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRY----NTDEDVDRLL 363 (382)
T ss_dssp TEEEEEET--TCCHHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTT----CCHHHHHHHH
T ss_pred CEEEEEEC--CCCHHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCC----CCHHHHHHHH
Confidence 56666653 6789999999999999887422111100 0 0 036799997543 3578899888
Q ss_pred HHHHHHHH
Q 032257 79 YFFDAAVK 86 (144)
Q Consensus 79 ~~i~~~l~ 86 (144)
+.|.+++.
T Consensus 364 ~~l~~~~~ 371 (382)
T 4hvk_A 364 EVLPGVIE 371 (382)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877774
No 56
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=81.20 E-value=3.2 Score=32.89 Aligned_cols=76 Identities=17% Similarity=0.156 Sum_probs=50.2
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|++++. .+.+++++++. .+.+..++.+.|.+.||.+.....+..+ ...+.+||+... ..+++|++++.+.|
T Consensus 315 g~~~~~--~~g~~~~~~~~-~~~~~~~l~~~l~~~gi~v~~~~~~~~~--~~~~~iRis~~~----~~~~e~i~~~~~~l 385 (398)
T 3a2b_A 315 GFDLGA--TESPILPIFIR-SNEKTFWVTKMLQDDGVFVNPVVSPAVP--AEESLIRFSLMA----THTYDQIDEAIEKM 385 (398)
T ss_dssp TCCBCS--CCSSEEEEECC-CHHHHHHHHHHHHHTTEECEEECTTTSC--GGGCEEEEECCT----TCCHHHHHHHHHHH
T ss_pred CCCcCC--CCCCEEEEEcC-CHHHHHHHHHHHHHCCcEEEeeCCCCCC--CCCceEEEEEeC----CCCHHHHHHHHHHH
Confidence 455543 24678888874 2445667777777779998764433221 123579999654 25789999999888
Q ss_pred HHHHH
Q 032257 82 DAAVK 86 (144)
Q Consensus 82 ~~~l~ 86 (144)
.+++.
T Consensus 386 ~~~l~ 390 (398)
T 3a2b_A 386 VKVFK 390 (398)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87774
No 57
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=81.17 E-value=3.8 Score=33.05 Aligned_cols=77 Identities=12% Similarity=0.047 Sum_probs=49.0
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|+.++. .....++++++.. +++..++.+.|.+.||.+..-...+. .+..++.|||+.... +++|+++..+.|
T Consensus 340 g~~~~~-~~~g~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~g~~f~~-~~~~~~~iRis~~~~-----~~e~i~~~l~~l 411 (425)
T 1vp4_A 340 GVKWVK-SEGGLFIWLTLPE-GFDTWEMFEYAKRKKVFYVPGRVFKV-YDEPSPSMRLSFCLP-----PDEKIVEGIKRL 411 (425)
T ss_dssp TCEECC-CSBSSEEEEECCT-TCCTTTTHHHHHHHTEECEEGGGGCT-TCCCCSEEEEECSSS-----CHHHHHHHHHHH
T ss_pred ceEEec-CCccEEEEEEcCC-CCCHHHHHHHHHHCCCEEECchhhcC-CCCCCCeEEEEeCCC-----CHHHHHHHHHHH
Confidence 455542 2335678898854 56666666666666999875332211 111246799986542 689999888888
Q ss_pred HHHHH
Q 032257 82 DAAVK 86 (144)
Q Consensus 82 ~~~l~ 86 (144)
.+++.
T Consensus 412 ~~~l~ 416 (425)
T 1vp4_A 412 REVVL 416 (425)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77764
No 58
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=81.15 E-value=7.2 Score=30.20 Aligned_cols=65 Identities=11% Similarity=0.150 Sum_probs=44.5
Q ss_pred CccceeeEeccCCCCCHHHHHHHHhh-cCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 10 TENHLVLVNLKNKGIDGSRVEKVLEA-VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 10 Td~Hlvlvdl~~~gi~g~~~~~~Le~-~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
...+++++.+.. + ++.++.+.|.+ .||.+..-... .+..++.|||+.. .++|++++.+.+.+++.
T Consensus 275 ~~~~~~~~~~~~-~-~~~~l~~~L~~~~gi~v~~g~~f---~~~~~~~iRis~~-------~~~~~~~l~~al~~~~~ 340 (350)
T 3fkd_A 275 SGTTFFLLRLKK-G-TAAELKKYMLEEYNMLIRDASNF---RGLDESYVRITTQ-------RPAQNQLFIKALETFLE 340 (350)
T ss_dssp CSSSEEEEEESS-S-CHHHHHHHHHHTTCEECEECTTS---TTCCTTEEEEECC-------CHHHHHHHHHHHHHHHT
T ss_pred CCCcEEEEECCC-C-CHHHHHHHHHHHCCEEEEeCccC---CCCCCCEEEEEcC-------CHHHHHHHHHHHHHHHH
Confidence 445677788754 3 78888888887 99998743222 1223467999853 67888888888776663
No 59
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=80.82 E-value=6.8 Score=30.74 Aligned_cols=72 Identities=13% Similarity=0.053 Sum_probs=47.4
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|++++.. ....++++++... + +.+.|.+.||.+.....++.. +..++.+||+... +++|+.+..+.|
T Consensus 298 g~~~~~~-~~~~~~~~~~~~~--~---~~~~l~~~gi~v~~g~~~~~~-~~~~~~iRi~~~~------~~~~i~~~~~~l 364 (381)
T 1v2d_A 298 GLRVYVP-EGTYFLMAELPGW--D---AFRLVEEARVALIPASAFYLE-DPPKDLFRFAFCK------TEEELHLALERL 364 (381)
T ss_dssp TCCEECC-SBSSEEEEECTTC--C---HHHHHHHTCEECEEGGGGCSS-SCCTTEEEEECCS------CHHHHHHHHHHH
T ss_pred CCEecCC-CcceEEEEecChH--h---HHHHHHhCCEEEecchHhCCC-CCCCCEEEEEeCC------CHHHHHHHHHHH
Confidence 5555532 2245778887643 2 888999999999754332221 1234679999653 788999988888
Q ss_pred HHHHH
Q 032257 82 DAAVK 86 (144)
Q Consensus 82 ~~~l~ 86 (144)
.+++.
T Consensus 365 ~~~l~ 369 (381)
T 1v2d_A 365 GRVVN 369 (381)
T ss_dssp HHHC-
T ss_pred HHHHh
Confidence 87774
No 60
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=80.46 E-value=4.6 Score=32.74 Aligned_cols=78 Identities=18% Similarity=0.147 Sum_probs=51.5
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|+++.......+++++++.. +.+..++.+.|.+.||.+.....|+-+. ..+.|||+... ..+++|++++.+.|
T Consensus 336 g~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~Gi~v~~~~~~~~~~--~~~~lRi~~~~----~~t~e~i~~~~~~l 408 (427)
T 2w8t_A 336 GFRLGTETCDSAIVAVMLED-QEQAAMMWQALLDGGLYVNMARPPATPA--GTFLLRCSICA----EHTPAQIQTVLGMF 408 (427)
T ss_dssp TCEESCSSCCSSEEEEEESS-HHHHHHHHHHHHHTTEECEEECTTTSCT--TCEEEEEECCT----TCCHHHHHHHHHHH
T ss_pred CCcccCCCCCCCEEEEEECC-HHHHHHHHHHHHHCCeEEeeeCCCCCCC--CCeEEEEEeCC----CCCHHHHHHHHHHH
Confidence 55555222256788888742 2345667777777799998655444221 23579998654 35789999999998
Q ss_pred HHHHH
Q 032257 82 DAAVK 86 (144)
Q Consensus 82 ~~~l~ 86 (144)
.+++.
T Consensus 409 ~~~l~ 413 (427)
T 2w8t_A 409 QAAGR 413 (427)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88774
No 61
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=80.37 E-value=7.3 Score=31.85 Aligned_cols=79 Identities=16% Similarity=0.070 Sum_probs=52.6
Q ss_pred CCeeeeCC---CccceeeEeccCC---CCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHH
Q 032257 2 GYELVSGG---TENHLVLVNLKNK---GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFA 75 (144)
Q Consensus 2 G~~vv~gg---Td~Hlvlvdl~~~---gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~ 75 (144)
|++++..+ ...+++.+.+.+. +++..++.+.|.+.||.+.....|.... ....|||.....+ +++|+.
T Consensus 348 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~--~~~~lRis~~~~~----t~e~id 421 (452)
T 2dgk_A 348 PYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEAT--DIVVMRIMCRRGF----EMDFAE 421 (452)
T ss_dssp SEEEEEECCTTTBSSEEEEEECTTCCCSCCHHHHHHHHHHTTCBCCEEECSTTCT--TCEEEEEECCTTC----CHHHHH
T ss_pred CeEEecCCCCCCCeEEEEEEecCcccccCCHHHHHHHHHhcCCeeeeeeCCcccC--CeEEEEEEecCCC----CHHHHH
Confidence 46676533 4667888877542 3567889999999999876544443321 1246999976544 468888
Q ss_pred HHHHHHHHHHH
Q 032257 76 KVAYFFDAAVK 86 (144)
Q Consensus 76 ~ia~~i~~~l~ 86 (144)
.+.+.|.+++.
T Consensus 422 ~li~~l~~~~~ 432 (452)
T 2dgk_A 422 LLLEDYKASLK 432 (452)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88887776664
No 62
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=80.30 E-value=3.4 Score=32.27 Aligned_cols=67 Identities=15% Similarity=0.121 Sum_probs=46.0
Q ss_pred CCeeeeC-CCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHH
Q 032257 2 GYELVSG-GTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (144)
Q Consensus 2 G~~vv~g-gTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~ 80 (144)
|++++.. ....+++++++. .+++..++.+.|.+.||.+.... .++.|||+.... .+++|++++.+.
T Consensus 318 g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~~~--------~~~~iRis~~~~----~~~~~i~~~~~~ 384 (390)
T 1elu_A 318 HVHCLATSAPQAGLVSFTVD-SPLGHRAIVQKLEEQRIYLRTIA--------DPDCIRACCHYI----TDEEEINHLLAR 384 (390)
T ss_dssp TEEESCSSCCSSSEEEEEEC-SSSCHHHHHHHHHHTTEECEEET--------TTTEEEEECCTT----CCHHHHHHHHHH
T ss_pred CcEEecCccccccEEEEEcC-CCCCHHHHHHHHHHCCEEEEecC--------CCCeEEEecccC----CCHHHHHHHHHH
Confidence 5555532 245678888874 36788889999999999987532 235799996332 356888777666
Q ss_pred H
Q 032257 81 F 81 (144)
Q Consensus 81 i 81 (144)
|
T Consensus 385 l 385 (390)
T 1elu_A 385 L 385 (390)
T ss_dssp H
T ss_pred H
Confidence 5
No 63
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=79.49 E-value=2.8 Score=33.02 Aligned_cols=73 Identities=8% Similarity=0.066 Sum_probs=47.7
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|+++.. ...+++++++.. +.+..++.+.|.+.||.+.....|+.+ ...+.+||+... ..+++|++++.+.|
T Consensus 310 g~~~~~--~~~~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~~~~~~~~--~~~~~~Ri~~~~----~~~~~~i~~~~~~l 380 (384)
T 1bs0_A 310 PFTLAD--SCSAIQPLIVGD-NSRALQLAEKLRQQGCWVTAIRPPTVP--AGTARLRLTLTA----AHEMQDIDRLLEVL 380 (384)
T ss_dssp SCEECS--CCSSBCCEEEES-HHHHHHHHHHHHHTTEECCEECTTSSC--TTCEEECCBCCT----TCCHHHHHHHHHHH
T ss_pred CCcccC--CCCCEEEEEeCC-HHHHHHHHHHHHHCCcEEEeecCCCCC--CCCceEEEEEcC----CCCHHHHHHHHHHH
Confidence 455542 456888888742 345677777788889999865544422 123579999653 34678888877776
Q ss_pred HH
Q 032257 82 DA 83 (144)
Q Consensus 82 ~~ 83 (144)
.+
T Consensus 381 ~~ 382 (384)
T 1bs0_A 381 HG 382 (384)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 64
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=79.28 E-value=3.4 Score=32.01 Aligned_cols=63 Identities=13% Similarity=-0.005 Sum_probs=41.6
Q ss_pred cceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
++++++++.. +.+..++.+.|.+.||.+. |+.. .++.|||+....+ +++|++++.+.|.+++.
T Consensus 296 ~~~~~~~~~~-~~~~~~~~~~l~~~gi~~~----~~~~---~~~~iRis~~~~~----~~~~i~~~~~~l~~~~~ 358 (360)
T 1w23_A 296 LMNVTFNLRN-EELNQQFLAKAKEQGFVGL----NGHR---SVGGCRASIYNAV----PIDACIALRELMIQFKE 358 (360)
T ss_dssp SSEEEEECSS-HHHHHHHHHHHHHTTEESC----BCCT---TTCSEEEECCTTS----CHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCC-CccHHHHHHHHHHCCeeee----cCCC---CCCeEEEEecCCC----CHHHHHHHHHHHHHHHh
Confidence 4588888743 2234455666777999873 3332 1467999976543 57899998888877653
No 65
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=79.12 E-value=6 Score=30.77 Aligned_cols=74 Identities=22% Similarity=0.161 Sum_probs=46.9
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhc-CceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAV-HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~-gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~ 80 (144)
|+.+.......+++.+. ..+++..++.+.|.+. ||.+....- +...+.|||+.... .+++|++++.+.
T Consensus 298 ~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~gi~v~~g~~-----~~~~~~lRis~~~~----~t~e~i~~~~~~ 366 (376)
T 3f0h_A 298 PFELVSESPANGVTSVH--PTTANAYDIFLKLKDEYGIWICPNGG-----EMKDTIFRVGHIGA----LTHEDNTTLVNA 366 (376)
T ss_dssp SEEECCSSBBTTEEEEE--ESSSCHHHHHHHHHHHSSEECEECCG-----GGTTTCEEEECCSS----CCHHHHHHHHHH
T ss_pred CCccCccccCceEEEEe--CCCCCHHHHHHHHHHhCCEEEecCcc-----ccCCCEEEEecCCC----CCHHHHHHHHHH
Confidence 34444333334554444 3467888887777766 999874311 11235699997543 457999999998
Q ss_pred HHHHHH
Q 032257 81 FDAAVK 86 (144)
Q Consensus 81 i~~~l~ 86 (144)
|.+++.
T Consensus 367 l~~~l~ 372 (376)
T 3f0h_A 367 FKDLQK 372 (376)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888774
No 66
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=78.28 E-value=6.7 Score=30.91 Aligned_cols=65 Identities=18% Similarity=0.168 Sum_probs=41.7
Q ss_pred cceeeEeccCCCCCHHHHHHHHh-hcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVLE-AVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~Le-~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
+.++++++...+++..++.+.|. +.||.+..-...+ +..++.+||+... .++++.+..+.|.+++
T Consensus 321 ~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~---~~~~~~~Ris~~~------~~~~l~~~l~~l~~~l 386 (390)
T 1d2f_A 321 TYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYG---EEGRGFVRLNAGC------PRSKLEKGVAGLINAI 386 (390)
T ss_dssp CSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGC---GGGTTEEEEECCS------CHHHHHHHHHHHHHHH
T ss_pred cEEEEEEccccCCCHHHHHHHHHHHcCEEeeCccccC---CCCCCeEEEEecC------CHHHHHHHHHHHHHHH
Confidence 45557888655567888877777 7999987533222 1123579999764 3566666666655554
No 67
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=78.15 E-value=1.3 Score=34.66 Aligned_cols=71 Identities=17% Similarity=0.071 Sum_probs=47.0
Q ss_pred cceeeEeccCCCC-CHHHHHHHHhhcCceeecccCCCCC-CCC--------CC-------CceeecchhhhhcCCCHHHH
Q 032257 12 NHLVLVNLKNKGI-DGSRVEKVLEAVHIAANKNTVPGDV-SAM--------VP-------GGIRMGTPALTSRGFVEEDF 74 (144)
Q Consensus 12 ~Hlvlvdl~~~gi-~g~~~~~~Le~~gI~vnkn~lP~d~-~~~--------~~-------sgiRlGT~a~TtRG~~e~dm 74 (144)
.|++++.+...++ +..++.+.|.+.||.+....-|... +.+ .| +.|||+... ..+++|+
T Consensus 283 ~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~----~~t~~~i 358 (375)
T 2fnu_A 283 NHLYPILMHQKFFTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHA----NLNLESV 358 (375)
T ss_dssp CSCEEEEECGGGGGGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCT----TCCHHHH
T ss_pred eEEEEEEeCccccchHHHHHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCC----CCCHHHH
Confidence 4677888765445 7888999999999999842222211 000 11 459998543 3468999
Q ss_pred HHHHHHHHHHHH
Q 032257 75 AKVAYFFDAAVK 86 (144)
Q Consensus 75 ~~ia~~i~~~l~ 86 (144)
+.+.+.|.+++.
T Consensus 359 ~~~~~~l~~~~~ 370 (375)
T 2fnu_A 359 QNIAHSVLKTFE 370 (375)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999988877764
No 68
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=77.98 E-value=10 Score=29.29 Aligned_cols=63 Identities=17% Similarity=0.165 Sum_probs=42.6
Q ss_pred ccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
+..++++++.. .++.++.+.|.+.||.+..-... .+..++.+||+.. .++|++++.+.+.++.
T Consensus 296 ~~~~~~~~~~~--~~~~~l~~~l~~~gi~v~~g~~~---~~~~~~~iRis~~-------~~~~~~~l~~~l~~~~ 358 (361)
T 3ftb_A 296 HANFVLCRLEN--ISGEKLYDSLLKEDIVIRRCCNF---IGLDDSFVRFAIK-------DEKKNTKFLRALKGVE 358 (361)
T ss_dssp SSSEEEEEESS--SCHHHHHHHHHTTTEECEECTTS---TTCCTTEEEEECC-------CHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEcCC--CCHHHHHHHHHHCCeEEeeCccC---CCCCCCEEEEEcC-------CHHHHHHHHHHHHHHH
Confidence 34567788764 67888888888889998742211 1223467999964 6677877777766544
No 69
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=77.95 E-value=13 Score=29.78 Aligned_cols=69 Identities=12% Similarity=0.040 Sum_probs=46.6
Q ss_pred ccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCC-CCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d-~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
..+.+++++... +..++.+.|.+.||.+....--+. .....++.|||+... .+++++++..+.|.+++.
T Consensus 349 ~g~~~~~~~~~~--~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~-----~~~~~i~~~~~~l~~~l~ 418 (427)
T 3ppl_A 349 GGYFISLDVVPG--TASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSL-----PPVEELEVAMDGVATCVL 418 (427)
T ss_dssp BSSCEEEECSTT--CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSS-----SCHHHHHHHHHHHHHHHH
T ss_pred ccEEEEEECCcc--hHHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCC-----CCHHHHHHHHHHHHHHHH
Confidence 466788988642 688889999999999875211111 011235689998632 257888888888877774
No 70
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=77.71 E-value=8.9 Score=30.29 Aligned_cols=69 Identities=14% Similarity=0.072 Sum_probs=45.4
Q ss_pred ccceeeEeccCCCCCHHHHHHHHhhc-CceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 11 ENHLVLVNLKNKGIDGSRVEKVLEAV-HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~~~~~Le~~-gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
...++++++.. +++..++.+.|.+. ||.+..-...+. ....++.+||+.... +++|+++..+.|.+++.
T Consensus 333 ~~~~~~~~~~~-~~~~~~l~~~l~~~~gi~v~~g~~~~~-~~~~~~~iRis~~~~-----~~~~i~~~~~~l~~~l~ 402 (407)
T 2zc0_A 333 AGMFVMFFLPE-GADGISFANELMEREGVVVVPGKPFYT-DESGKNAIRLNFSRP-----SKEEIPIGIKKLAKLYK 402 (407)
T ss_dssp BSSEEEEECST-TCCHHHHHHHHHHHTCEECBCSGGGCS-SSCCTTEEEEECSSS-----CTTHHHHHHHHHHHHHH
T ss_pred CcEEEEEEcCC-CCCHHHHHHHHHHhCCeEEECchhccC-CCCCCCeEEEEeCCC-----CHHHHHHHHHHHHHHHH
Confidence 34678888753 67788777777666 999875322111 111246799986433 57899988888877764
No 71
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=77.15 E-value=6.2 Score=31.88 Aligned_cols=73 Identities=19% Similarity=0.240 Sum_probs=48.4
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHH-HHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVE-KVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~-~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~ 80 (144)
|+++.. ......+++++. +++..++. +++++.||.+..-...+. ...+.|||+.. .+++|+++..+.
T Consensus 365 g~~~~~-~~~~~~~~~~~~--~~~~~~~~~~l~~~~gI~v~pg~~f~~---~~~~~iRis~~------~~~e~i~~~l~~ 432 (449)
T 3qgu_A 365 GFSVYG-GDDAPYIWVGFP--GKPSWDVFAEILERCNIVTTPGSGYGP---AGEGFVRASAF------GSRENILEAVRR 432 (449)
T ss_dssp TCCEEE-SSSSSEEEEECT--TSCHHHHHHHHHHHHCEECEEGGGGCG---GGTTEEEEECC------SCHHHHHHHHHH
T ss_pred CCeeeC-CCCeeEEEEECC--CCCHHHHHHHHHHHCCEEEecchHhCC---CCCCeEEEEec------CCHHHHHHHHHH
Confidence 555543 334678899986 67777655 566778999875433221 12367999831 278899888888
Q ss_pred HHHHHH
Q 032257 81 FDAAVK 86 (144)
Q Consensus 81 i~~~l~ 86 (144)
|.+++.
T Consensus 433 l~~~~~ 438 (449)
T 3qgu_A 433 FKEAYG 438 (449)
T ss_dssp HHHHHC
T ss_pred HHHHHH
Confidence 877774
No 72
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=76.68 E-value=8.6 Score=30.64 Aligned_cols=65 Identities=11% Similarity=0.118 Sum_probs=43.7
Q ss_pred cceeeEeccCCCC---CHHHHHHHH-hhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGI---DGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 12 ~Hlvlvdl~~~gi---~g~~~~~~L-e~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
++++++++. .++ +..++.+.| ++.||.+..-..++. ..++.|||+... .++++.+..+.|.+++.
T Consensus 328 g~~~~~~~~-~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~---~~~~~iRis~~~------~~~~l~~~l~~l~~~l~ 396 (412)
T 2x5d_A 328 SMYVWAKIP-EPYAHLGSLEFAKKLLQDAKVSVSPGIGFGD---YGDDHVRFALIE------NRDRLRQAVRGIKAMFR 396 (412)
T ss_dssp SSEEEEECC-TTTGGGCHHHHHHHHHHHHCEECEEGGGGCG---GGTTEEEEECCS------CHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEcC-CccCCCCHHHHHHHHHHHCCEEEeCchhhCC---CCCCeEEEEecC------CHHHHHHHHHHHHHHHH
Confidence 567888874 345 566666666 668999875332211 123579999753 67888888888877775
No 73
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=76.35 E-value=12 Score=29.61 Aligned_cols=69 Identities=14% Similarity=0.120 Sum_probs=48.1
Q ss_pred CCeeeeCC---CccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHH
Q 032257 2 GYELVSGG---TENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVA 78 (144)
Q Consensus 2 G~~vv~gg---Td~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia 78 (144)
|++++... ...+++++++. ++.++.+.|.+.||.+... ..+.|||+.+.+ ..+++|++++.
T Consensus 329 g~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~l~~~gi~~~~~---------~~~~lRis~~~~---~~t~~~i~~~~ 392 (416)
T 1qz9_A 329 ELTLVTPREHAKRGSHVSFEHP----EGYAVIQALIDRGVIGDYR---------EPRIMRFGFTPL---YTTFTEVWDAV 392 (416)
T ss_dssp CCEECSCSSGGGBCSEEEEECT----THHHHHHHHHTTTEECEEE---------TTTEEEEECCTT---TCCHHHHHHHH
T ss_pred CeEEeCCCCHHHcCCEEEEecC----CHHHHHHHHHhCCcEeccC---------CCCeEEEeCccc---CCCHHHHHHHH
Confidence 66665432 13678888875 3778888888899987421 235799996531 24689999999
Q ss_pred HHHHHHHH
Q 032257 79 YFFDAAVK 86 (144)
Q Consensus 79 ~~i~~~l~ 86 (144)
+.|.+++.
T Consensus 393 ~~l~~~~~ 400 (416)
T 1qz9_A 393 QILGEILD 400 (416)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99888774
No 74
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=76.27 E-value=9.3 Score=29.95 Aligned_cols=65 Identities=18% Similarity=0.198 Sum_probs=42.3
Q ss_pred cceeeEeccCCCCCHHHHHHHHhhc-CceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVLEAV-HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~Le~~-gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
.+++++.+. .+.++.++.+.|.+. ||.+..-.-+. .+..+||+....++ .+++++++.+.|.+++
T Consensus 327 ~~~~~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~~~-----~~~~iRis~~~~~~---~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 327 PTLTTVCIP-DGVDGKAVARRLLNEHNIEVGGGLGEL-----AGKVWRVGLMGFNS---RKESVDQLIPALEQVL 392 (393)
T ss_dssp SSEEEEECC-TTCCHHHHHHHHHHHHCEECEECCGGG-----TTTEEEEECCGGGC---SHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcC-CCCCHHHHHHHHHhhCCEEEecCcccc-----CCCEEEEeCCccCC---hHHHHHHHHHHHHHHh
Confidence 466777763 366788888777765 99987433211 24679999533332 4567888888776654
No 75
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=75.75 E-value=3.2 Score=32.92 Aligned_cols=45 Identities=13% Similarity=0.210 Sum_probs=35.2
Q ss_pred CCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 23 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 23 gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
++++..++..|++.||.+. +++||+... ++++|++++.+.|.+++
T Consensus 356 ~~~~~~~~~ll~~~gi~v~-------------~~~Ris~~~-----~~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 356 GLKPEQVERLTKEFSIYMT-------------KDGRISVAG-----VASSNVGYLAHAIHQVT 400 (401)
T ss_dssp CCCHHHHHHHHHHHCEECC-------------TTCEEEGGG-----CCTTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCEecc-------------CCCeEEecc-----CChhhHHHHHHHHHHHh
Confidence 3568888888999999985 358998754 56677999988887765
No 76
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=75.51 E-value=7.1 Score=30.58 Aligned_cols=64 Identities=17% Similarity=0.094 Sum_probs=41.3
Q ss_pred cceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
+.++++++.. +++..++.+.|.+.||.+..-...+. ..++.+||+... .++++.+..+.|.+++
T Consensus 312 ~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~f~~---~~~~~~Ris~~~------~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 312 TMYLWGRLPE-GVDDLEFGLRLVERGVALAPGRGFGP---GGKGFVRIALVR------PLEELLEAAKRIREAL 375 (376)
T ss_dssp SSEEEEECCT-TCCHHHHHHHHHHTTEECEEGGGGCG---GGTTEEEEECCS------CHHHHHHHHHHHHHTC
T ss_pred eEEEEEECCC-CCCHHHHHHHHHHCCEEEcCchhhCC---CCCCeEEEEecC------CHHHHHHHHHHHHHHh
Confidence 4567788753 56777777777777999975332221 123579999642 5677777776665543
No 77
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=74.69 E-value=8.7 Score=30.57 Aligned_cols=66 Identities=11% Similarity=0.020 Sum_probs=43.3
Q ss_pred cceeeEeccCC-CCCHHHHHHHH-hhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNK-GIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 12 ~Hlvlvdl~~~-gi~g~~~~~~L-e~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
+.++++++... +.+..++.+.| ++.||.+......+. ..++.+||+.. .+++++.+..+.|.+++.
T Consensus 334 ~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~---~~~~~lRis~~------~~~~~i~~~~~~l~~~l~ 401 (406)
T 1xi9_A 334 AFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGE---YGAGHFRAVFL------PPIEILEEAMDRFEKFMK 401 (406)
T ss_dssp SSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCG---GGTTBEEEECC------SCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCccCCCCHHHHHHHHHHhCCEEEeCchhcCC---CCCCEEEEEec------CCHHHHHHHHHHHHHHHH
Confidence 45566677542 56777777766 599998875332221 12367999974 567888888777776663
No 78
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=74.69 E-value=11 Score=29.33 Aligned_cols=66 Identities=12% Similarity=0.108 Sum_probs=44.6
Q ss_pred CccceeeEeccCCCCCHHHHHHHHhh-cCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 10 TENHLVLVNLKNKGIDGSRVEKVLEA-VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 10 Td~Hlvlvdl~~~gi~g~~~~~~Le~-~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
....++++++. ++.++.+.|.+ .||.+..-..++. .+..++.+||+.. .+++|+++..+.|.+++.
T Consensus 307 ~~~~~~~~~~~----~~~~~~~~l~~~~gi~v~~g~~~~~-~~~~~~~iRis~~------~~~~~i~~~l~~l~~~l~ 373 (376)
T 3ezs_A 307 PYSFYVYLPVQ----NGENFAKTLYQNEGIITLPALYLGR-NRIGADYVRLALV------YDTPLLEKPLEIIETYRE 373 (376)
T ss_dssp SBSSEEEEECS----CHHHHHHHHHHHHCCBCEEGGGGCS-TTTTTTEEEEECC------SCHHHHHHHHHHHHHHHC
T ss_pred CcceEEEEECC----CHHHHHHHHHHhCCEEEeCcHHhCC-CCCCCCeEEEEEc------CCHHHHHHHHHHHHHHHH
Confidence 34567788875 57777777766 9999975333321 1223467999854 178999998888877763
No 79
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=74.67 E-value=8.9 Score=30.76 Aligned_cols=58 Identities=16% Similarity=0.177 Sum_probs=43.2
Q ss_pred ceeeEeccCCCCCHHHHHHHHhh-cCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 13 HLVLVNLKNKGIDGSRVEKVLEA-VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 13 Hlvlvdl~~~gi~g~~~~~~Le~-~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
.++++++. +++..++.+.|.+ .||.+.. + .++.+||+... .+++|+++..+.|.+++.
T Consensus 369 ~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~----g-----~~~~iRis~~~-----~~~e~i~~~~~~l~~~l~ 427 (430)
T 2x5f_A 369 YFMAIKVH--DVDPEALRKHLIDKYSIGVIA----L-----NATDIRIAFSC-----VEKDDIPHVFDSIAKAID 427 (430)
T ss_dssp SEEEEEES--SSCHHHHHHHHHHHHCEECEE----C-----SSSEEEEEGGG-----SCGGGHHHHHHHHHHHHH
T ss_pred EEEEeCCC--CCCHHHHHHHHHHhCCEEEec----C-----CCCeEEEEEec-----CCHHHHHHHHHHHHHHHH
Confidence 45788886 6788888777776 9999874 3 23569999653 467889988888877764
No 80
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=74.58 E-value=7.4 Score=29.85 Aligned_cols=67 Identities=21% Similarity=0.253 Sum_probs=44.0
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|++++. ....+++++++. .++.+.|.+.||.+..-..+ ++.+||..+ ...+++|++++.+.|
T Consensus 285 g~~~~~-~~~~~~~~~~~~------~~~~~~l~~~gi~v~~g~~~-------~~~iRi~~~----~~~~~~~i~~~~~~l 346 (356)
T 1v72_A 285 GVEVLG-GTEANILFCRLD------SAMIDALLKAGFGFYHDRWG-------PNVVRFVTS----FATTAEDVDHLLNQV 346 (356)
T ss_dssp TEEEES-CCCSSEEEEEEC------HHHHHHHHHTTCBCBCSSSS-------TTEEEEECC----TTCCHHHHHHHHHHH
T ss_pred CcEEcc-CCCccEEEEEcC------HHHHHHHHhcCeEEeccccC-------CCeEEEEec----CCCCHHHHHHHHHHH
Confidence 555543 345677888863 26667778889988742211 457999843 345679999888887
Q ss_pred HHHHH
Q 032257 82 DAAVK 86 (144)
Q Consensus 82 ~~~l~ 86 (144)
.+++.
T Consensus 347 ~~~l~ 351 (356)
T 1v72_A 347 RLAAD 351 (356)
T ss_dssp HHTC-
T ss_pred HHHHH
Confidence 76653
No 81
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=74.56 E-value=10 Score=29.70 Aligned_cols=67 Identities=12% Similarity=0.030 Sum_probs=43.0
Q ss_pred ccceeeEeccCCCCCHHHHHHHH-hhcCceeecccCCCC---CCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 11 ENHLVLVNLKNKGIDGSRVEKVL-EAVHIAANKNTVPGD---VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~~~~~L-e~~gI~vnkn~lP~d---~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
...++++++.. .+..+..+.| ++.||.+..-..++. ..+...+.+||+... +++++.+..+.|.+++
T Consensus 325 ~~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~------~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 325 ASFYIWLKVPD--GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA------DVATCVKAAEDIVSLY 395 (396)
T ss_dssp SSSEEEEECTT--SCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS------CHHHHHHHHHHHHHHC
T ss_pred eeEEEEEECCC--CCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC------CHHHHHHHHHHHHHHh
Confidence 35678888864 4666666655 788999875433222 112235689998532 6788888777766554
No 82
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=74.11 E-value=9.2 Score=34.55 Aligned_cols=54 Identities=11% Similarity=0.055 Sum_probs=42.0
Q ss_pred cCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 20 KNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 20 ~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
+..|++|..+.+.|.+.||.+++. ....||+- ++-|-+++|+..+.+.+.+...
T Consensus 511 ~~~g~~~~~l~~~L~e~GI~v~~~---------~~~~ir~~----~s~g~t~e~i~~Ll~aL~~i~~ 564 (730)
T 1c4k_A 511 EDFGVPATIVANYLRDHGIIPEKS---------DLNSILFL----MTPAETPAKMNNLITQLLQLQR 564 (730)
T ss_dssp CSSCCCHHHHHHHHHHTTCCCSEE---------CSSEEEEE----CCTTCCHHHHHHHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHCCcEEEEC---------CCCeEEEE----eCCCCCHHHHHHHHHHHHHHHH
Confidence 456899999999999999999864 13457764 4667788999998888777654
No 83
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=73.86 E-value=12 Score=29.20 Aligned_cols=67 Identities=10% Similarity=0.016 Sum_probs=46.4
Q ss_pred ccceeeEeccCCCCCHHHHHHHHhhc-CceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 11 ENHLVLVNLKNKGIDGSRVEKVLEAV-HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~~~~~Le~~-gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
..|++++.+. .+++..++.+.|.+. ||.+..-..| ..++.+||+.... ..+++|++++.+.|.+++.
T Consensus 302 ~~~~~~~~~~-~~~~~~~l~~~L~~~~gi~v~~g~~~-----~~~~~lRi~~~~~---~~~~~~i~~~~~~l~~~~~ 369 (392)
T 2z9v_A 302 SPTTTAVRTP-DGVDEKALRQAARARYGVVFSSGRGE-----TLGKLTRIGHMGP---TAQPIYAIAALTALGGAMN 369 (392)
T ss_dssp CTTEEEEECC-TTCCHHHHHHHHHHHHCEECEECCGG-----GTTTEEEEECCGG---GCSHHHHHHHHHHHHHHHH
T ss_pred CCceEEEECC-CCCCHHHHHHHHHhcCCEEEecCCCC-----CCCCeEEEeCccc---ccCHHHHHHHHHHHHHHHH
Confidence 4677888763 367888888888775 9998643321 1246799994221 1357899999999888875
No 84
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=73.79 E-value=5.5 Score=30.92 Aligned_cols=69 Identities=14% Similarity=0.207 Sum_probs=45.9
Q ss_pred cceeeEeccCCCCCHHHHHHHHhhcCceeecccC--CCCCC--------C----CCCCceeecchhhhhcCCCHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTV--PGDVS--------A----MVPGGIRMGTPALTSRGFVEEDFAKV 77 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~l--P~d~~--------~----~~~sgiRlGT~a~TtRG~~e~dm~~i 77 (144)
.+++++.+. +++..++.+.|.+.||.+..-.. |.... + ...+.|||+.... .+++|++++
T Consensus 289 ~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~----~~~~~i~~~ 362 (382)
T 4eb5_A 289 PNNVNVRFS--YIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRY----NTDEDVDRL 362 (382)
T ss_dssp TTEEEEEET--TSCHHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTT----CCHHHHHHH
T ss_pred CCEEEEEeC--CcCHHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCC----CCHHHHHHH
Confidence 567777765 57888999999999998874221 11000 0 0135799996433 357899998
Q ss_pred HHHHHHHHH
Q 032257 78 AYFFDAAVK 86 (144)
Q Consensus 78 a~~i~~~l~ 86 (144)
.+.|.+++.
T Consensus 363 ~~~l~~~~~ 371 (382)
T 4eb5_A 363 LEVLPGVIE 371 (382)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888877764
No 85
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=73.76 E-value=10 Score=29.09 Aligned_cols=61 Identities=15% Similarity=0.116 Sum_probs=42.5
Q ss_pred cceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAA 84 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~ 84 (144)
.+++++++.. +..++.+.|.+.||.+....-+ ...+.|||+....+ +++|++.+.+.|.++
T Consensus 300 ~~~~~~~~~~---~~~~~~~~l~~~gi~~~~g~~~-----~~~~~iRis~~~~~----~~e~i~~l~~~l~~~ 360 (362)
T 3ffr_A 300 MTTIVANTTM---LPGEINKILEPFDMAVGAGYGS-----KKETQIRIANFPAH----SLEQVHKLVQTLKEK 360 (362)
T ss_dssp SSEEEEEESS---CHHHHHHHHGGGTEEEEECSGG-----GTTTEEEEECCTTS----CHHHHHHHHHHHHHH
T ss_pred CceEEEecCC---CHHHHHHHHHHCCeEEecCccc-----cCCCEEEEECCCCC----CHHHHHHHHHHHHHH
Confidence 5677777654 7888888898889999853211 12357999976533 568888888776554
No 86
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=73.17 E-value=8.4 Score=29.99 Aligned_cols=58 Identities=9% Similarity=0.023 Sum_probs=41.1
Q ss_pred ccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHH
Q 032257 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAA 84 (144)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~ 84 (144)
..+++++++.. +..++.+.|.+.||.+... .++.+||+.+. ..+++|++++.+.|.++
T Consensus 317 ~g~~~~~~~~~---~~~~~~~~l~~~gi~~~~~---------~~~~iRi~~~~----~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 317 RGLMLGLELER---ECKDYVLKALEKGLLINCT---------AGKVLRFLPPL----IIQKEHIDRAISVLREI 374 (375)
T ss_dssp ETTEEEEECSS---CCHHHHHHHHHTTEECEEE---------TTTEEEECCCT----TCCHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEcC---cHHHHHHHHHHCCCEEecC---------CCCEEEEECCC----CCCHHHHHHHHHHHHHh
Confidence 35678888753 4566777777899988742 13679999653 45678998888877654
No 87
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=72.98 E-value=9.2 Score=30.96 Aligned_cols=80 Identities=16% Similarity=0.190 Sum_probs=49.0
Q ss_pred CCeeeeCCCccceeeEeccC--CCCC-----HHHHHHHH-hhcCceeeccc-C-----C--CCCCCCCCCceeecchhhh
Q 032257 2 GYELVSGGTENHLVLVNLKN--KGID-----GSRVEKVL-EAVHIAANKNT-V-----P--GDVSAMVPGGIRMGTPALT 65 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~--~gi~-----g~~~~~~L-e~~gI~vnkn~-l-----P--~d~~~~~~sgiRlGT~a~T 65 (144)
|++++ ....+++++++.. .+++ +..+.+.| .+.||.+.... . | +...+...+.|||..+
T Consensus 345 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~--- 419 (467)
T 2oqx_A 345 GVVCQ--QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIP--- 419 (467)
T ss_dssp TCCEE--EECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCC---
T ss_pred CCeee--cCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEec---
Confidence 44444 2345788888743 2344 44446666 99999987522 1 1 0001111257999865
Q ss_pred hcC-CCHHHHHHHHHHHHHHHHh
Q 032257 66 SRG-FVEEDFAKVAYFFDAAVKL 87 (144)
Q Consensus 66 tRG-~~e~dm~~ia~~i~~~l~~ 87 (144)
+. .+++|++++.+.|.+++..
T Consensus 420 -~~~~t~e~i~~~~~~l~~~l~~ 441 (467)
T 2oqx_A 420 -RATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_dssp -TTTSCHHHHHHHHHHHHHHHHS
T ss_pred -CCCCCHHHHHHHHHHHHHHHhh
Confidence 33 5789999999999888853
No 88
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=72.97 E-value=6.2 Score=31.00 Aligned_cols=72 Identities=14% Similarity=0.158 Sum_probs=48.9
Q ss_pred ccceeeEeccC--CCCCHHHHHHHHhhcCceeecccCCC--C--------CCCC------CCCceeecchhhhhcCCCHH
Q 032257 11 ENHLVLVNLKN--KGIDGSRVEKVLEAVHIAANKNTVPG--D--------VSAM------VPGGIRMGTPALTSRGFVEE 72 (144)
Q Consensus 11 d~Hlvlvdl~~--~gi~g~~~~~~Le~~gI~vnkn~lP~--d--------~~~~------~~sgiRlGT~a~TtRG~~e~ 72 (144)
-.|++++.+.. .+++..++.+.|.+.||.+..-..|. . ...+ ..+.|||+... ..+++
T Consensus 295 ~~~~~~v~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~----~~t~~ 370 (393)
T 1mdo_A 295 AWHLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFP----DMTES 370 (393)
T ss_dssp CCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCT----TCCHH
T ss_pred eeEEEEEEecccccccCHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCC----CCCHH
Confidence 35788888753 15688999999999999987543330 0 0011 12369998543 45689
Q ss_pred HHHHHHHHHHHHHH
Q 032257 73 DFAKVAYFFDAAVK 86 (144)
Q Consensus 73 dm~~ia~~i~~~l~ 86 (144)
|++.+.+.|.+++.
T Consensus 371 ~i~~~~~~l~~~~~ 384 (393)
T 1mdo_A 371 DFDRVITALHQIAG 384 (393)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999887774
No 89
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=72.86 E-value=13 Score=29.37 Aligned_cols=69 Identities=14% Similarity=0.181 Sum_probs=44.0
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHH-hhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~L-e~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~ 80 (144)
|++++. ...+.++++++. .+..++.+.| ++.||.+......+. ++.+||+... +++++.+..+.
T Consensus 317 g~~~~~-~~~~~~~~~~~~---~~~~~l~~~l~~~~gi~v~~g~~f~~-----~~~~Ris~~~------~~~~l~~~l~~ 381 (389)
T 1o4s_A 317 GVKFVE-PEGAFYLFFKVR---GDDVKFCERLLEEKKVALVPGSAFLK-----PGFVRLSFAT------SIERLTEALDR 381 (389)
T ss_dssp TCCCCC-CSBSSEEEEECS---SCHHHHHHHHHHHHCEECEEGGGGTC-----TTEEEEECCS------CHHHHHHHHHH
T ss_pred CCeeec-CCcceEEEEeCC---CCHHHHHHHHHHHCCEEEeCchhcCC-----CCeEEEEEeC------CHHHHHHHHHH
Confidence 445442 223556777875 4677777777 499999875332221 3479999751 67788777777
Q ss_pred HHHHH
Q 032257 81 FDAAV 85 (144)
Q Consensus 81 i~~~l 85 (144)
|.+++
T Consensus 382 l~~~l 386 (389)
T 1o4s_A 382 IEDFL 386 (389)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66655
No 90
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=72.70 E-value=9.9 Score=29.92 Aligned_cols=66 Identities=15% Similarity=0.130 Sum_probs=43.1
Q ss_pred cceeeEeccCCCCCHHHHHHHHh-hcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVLE-AVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~Le-~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
+.++++++...+++..++.+.|. +.||.+......+ +..++.|||+... .++++.+..+.|.+++.
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRis~~~------~~~~l~~~l~~l~~~l~ 391 (399)
T 1c7n_A 325 TYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFG---DGGIGFERINLAA------PSSVIQESLERLNKALK 391 (399)
T ss_dssp SSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGC---GGGTTEEEEECCS------CHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEcccCCCCHHHHHHHHHHhCCEEEeCccccC---CCCCCeEEEEecc------CHHHHHHHHHHHHHHHH
Confidence 44556888755678888888884 8999987533221 1123579999753 26777777777666653
No 91
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=72.69 E-value=4.7 Score=33.02 Aligned_cols=59 Identities=19% Similarity=0.307 Sum_probs=43.0
Q ss_pred cceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecc-hhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT-PALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT-~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
..++++++. .++.++.+.|.+.||.+.. ..++.|||+. +..+ +++|+.++.+.|.+++.
T Consensus 400 g~~~~~~~~---~~~~~l~~~L~~~Gi~v~~---------~~~~~iRis~~~~~~----t~edi~~~~~~l~~~l~ 459 (465)
T 3e9k_A 400 GCQLTITFS---VPNKDVFQELEKRGVVCDK---------RNPNGIRVAPVPLYN----SFHDVYKFTNLLTSILD 459 (465)
T ss_dssp CSCEEEEEC---CTTCCHHHHHHTTTEECEE---------ETTTEEEEBCCTTTC----CHHHHHHHHHHHHHHHT
T ss_pred ccEEEEEec---CCHHHHHHHHHHCCEEEec---------CCCCEEEEeCcccCC----CHHHHHHHHHHHHHHHH
Confidence 456777765 3567788888889999872 1246899995 4444 47899999988888774
No 92
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=71.97 E-value=12 Score=28.51 Aligned_cols=59 Identities=24% Similarity=0.213 Sum_probs=41.1
Q ss_pred ccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
+..++++... ++..+.+.|.+.||.+..-..++. ++.+||+.. .++|++++.+.+.+++
T Consensus 276 ~~~~~~~~~~----~~~~~~~~l~~~gi~v~~g~~~~~-----~~~iRis~~-------~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 276 EANFVLVENA----AGERTLRFLRERGIQVKDAGQFGL-----HHHIRISIG-------REEDNDRLLAALAEYS 334 (337)
T ss_dssp SSSEEEEECT----TTHHHHHHHHHTTEECEEGGGGTC-----CSEEEEECC-------CHHHHHHHHHHHHHHT
T ss_pred CCeEEEEEcC----CHHHHHHHHHHCCeEEEECccCCC-----CCeEEEecC-------CHHHHHHHHHHHHHHh
Confidence 3446666643 467888999999999986443322 367999964 4788888887776544
No 93
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=71.68 E-value=6.9 Score=30.99 Aligned_cols=60 Identities=22% Similarity=0.179 Sum_probs=38.9
Q ss_pred cceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 82 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~ 82 (144)
+..+|+++...|++..++.+.|.+.||.+..-...+. ++.+||+.. ..++++.+..+.|.
T Consensus 320 ~~~~~~~~~~~~~~~~~l~~~l~~~gv~v~~g~~f~~-----~~~iRis~~------~~~~~i~~~l~~l~ 379 (385)
T 1b5p_A 320 AFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAA-----FGHVRLSYA------TSEENLRKALERFA 379 (385)
T ss_dssp TTEEEEECTTTCSSHHHHHHHHHHTTEECEESGGGTC-----TTEEEEECC------SCHHHHHHHHHHGG
T ss_pred eEEEEEecCCCCCCHHHHHHHHHHCCeEEecccccCC-----CCeEEEEec------CCHHHHHHHHHHHH
Confidence 3456778865677888888888899999864221111 457999853 45666555544443
No 94
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=71.63 E-value=11 Score=30.30 Aligned_cols=76 Identities=17% Similarity=0.190 Sum_probs=45.4
Q ss_pred CCeeeeCCCccceeeEeccCCCC-----CH-HHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGI-----DG-SRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFA 75 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi-----~g-~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~ 75 (144)
|++++. +.-.+++++++....- +. ..+++++++.||.+..-..++ +..++.+||+.+.+ +++++.
T Consensus 349 g~~~~~-~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRi~~~~~-----~~e~i~ 419 (435)
T 3piu_A 349 GISCLN-GNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCH---CTEPGWFRVCFANL-----PERTLD 419 (435)
T ss_dssp TCEECC-CCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGT---CSSTTEEEEECSSS-----CHHHHH
T ss_pred CCcccC-CCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccC---CCCCCEEEEEeeCC-----CHHHHH
Confidence 455443 2333678888864210 22 334555677799987532222 12346799995322 678998
Q ss_pred HHHHHHHHHHH
Q 032257 76 KVAYFFDAAVK 86 (144)
Q Consensus 76 ~ia~~i~~~l~ 86 (144)
+..+.|.+++.
T Consensus 420 ~~l~~l~~~l~ 430 (435)
T 3piu_A 420 LAMQRLKAFVG 430 (435)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888877774
No 95
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=71.55 E-value=9.4 Score=29.80 Aligned_cols=71 Identities=17% Similarity=0.110 Sum_probs=44.2
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHh-hcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLE-AVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le-~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~ 80 (144)
|++++. ...+.++++++.. +..++.+.|. +.||.+..-...+. ..++.+||+.. .+++++.+..+.
T Consensus 297 g~~~~~-~~~~~~~~~~~~~---~~~~~~~~l~~~~gi~v~~g~~f~~---~~~~~~Ri~~~------~~~~~i~~~~~~ 363 (370)
T 2z61_A 297 GWEVNN-PIGAYYVFPNIGE---DGREFAYKLLKEKFVALTPGIGFGS---KGKNYIRISYA------NSYENIKEGLER 363 (370)
T ss_dssp TCBCCC-CCBTTEECCBCSS---CHHHHHHHHHHHHCEECEEGGGGCG---GGSSBEEEECC------SCHHHHHHHHHH
T ss_pred CCeecC-CCcceEEEEecCC---CHHHHHHHHHHhCCEEEeCchhhCC---CCCCEEEEEEe------CCHHHHHHHHHH
Confidence 444442 2235567778754 6777777775 89999875322221 12357999976 366788777777
Q ss_pred HHHHH
Q 032257 81 FDAAV 85 (144)
Q Consensus 81 i~~~l 85 (144)
|.+++
T Consensus 364 l~~~l 368 (370)
T 2z61_A 364 IKEFL 368 (370)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66655
No 96
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=71.26 E-value=13 Score=28.98 Aligned_cols=65 Identities=14% Similarity=0.124 Sum_probs=43.4
Q ss_pred ceeeEeccCCCCCHHHHHHHHh-hcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 13 HLVLVNLKNKGIDGSRVEKVLE-AVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 13 Hlvlvdl~~~gi~g~~~~~~Le-~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
+++++.+. .++++.++.+.|. +.||.+....- +..+..+||+....+ .+++|++++.+.|.+++.
T Consensus 316 ~~~~~~~~-~~~~~~~~~~~L~~~~gi~v~~g~~-----~~~~~~iRi~~~~~~---~~~e~i~~~~~~l~~~l~ 381 (396)
T 2ch1_A 316 TVTGIMIP-KGVDWWKVSQYAMNNFSLEVQGGLG-----PTFGKAWRVGIMGEC---STVQKIQFYLYGFKESLK 381 (396)
T ss_dssp TEEEEECC-TTCCHHHHHHHHHHHHCBCCBCCCG-----GGTTTEEEEECCGGG---CSHHHHHHHHHHHHHHHH
T ss_pred ceEEEEcC-CCCCHHHHHHHHHHhCCEEEecCcc-----ccCCCEEEEECCCCc---CCHHHHHHHHHHHHHHHH
Confidence 46777763 4678888887775 46998863221 122467999963221 367889998888877764
No 97
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=70.52 E-value=25 Score=28.14 Aligned_cols=69 Identities=19% Similarity=0.150 Sum_probs=46.6
Q ss_pred CccceeeEeccCCCCCHHHHHHHHhhcCceeeccc--CCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 10 TENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNT--VPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 10 Td~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~--lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
....++|+++.. + +...+.+.|.+.||.+.... .+... ....+.|||+... .+++++++..+.|.+++.
T Consensus 346 ~~g~~~~~~~~~-~-~~~~~~~~l~~~gV~v~~~g~~f~~~~-~~~~~~iRis~~~-----~~~e~i~~~~~~l~~~l~ 416 (422)
T 3d6k_A 346 TGGYFISVDVVP-G-TASRVVELAKEAGIALTGAGSSFPLHN-DPNNENIRLAPSL-----PPVAELEVAMDGFATCVL 416 (422)
T ss_dssp SBSSCEEEEEST-T-CHHHHHHHHHHTTEECCCTTTTSGGGC-CTTSCEEEECCSS-----SCHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEECCC-C-CHHHHHHHHHHCCeEEEcCccccCCCC-CCCCCeEEEecCC-----CCHHHHHHHHHHHHHHHH
Confidence 345678889864 2 67888899999999987521 22011 0123579999643 467889888888877764
No 98
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=70.17 E-value=13 Score=29.20 Aligned_cols=59 Identities=17% Similarity=0.197 Sum_probs=43.3
Q ss_pred ccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
..+++++.+.. ++.++.+.|.+.||.+.. +. ++.|||..+. ..+++|++++.+.|.+++
T Consensus 333 ~g~~~~~~~~~---~~~~l~~~l~~~gi~v~~----~~-----~~~iRi~~~~----~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 333 KGLFIGIELNE---PARPYCEQLKAAGLLCKE----TH-----ENVIRIAPPL----VISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp ETTEEEEEESS---CSHHHHHHHHTTTEECCC----BT-----TTEEEECCCT----TCCHHHHHHHHHHHHHHH
T ss_pred eeeEEEEEEcc---hHHHHHHHHHHCCcEEec----CC-----CCEEEEECCC----CCCHHHHHHHHHHHHHHh
Confidence 35677777754 678888889999999873 21 4679998654 346788888888877665
No 99
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=69.86 E-value=11 Score=30.01 Aligned_cols=77 Identities=10% Similarity=0.052 Sum_probs=45.3
Q ss_pred CCeeeeCCCccceeeEeccCC-CCCHHHHHHHH-hhcCceeecccC--CCCC------CCCCCCceeecchhhhhcCCCH
Q 032257 2 GYELVSGGTENHLVLVNLKNK-GIDGSRVEKVL-EAVHIAANKNTV--PGDV------SAMVPGGIRMGTPALTSRGFVE 71 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~-gi~g~~~~~~L-e~~gI~vnkn~l--P~d~------~~~~~sgiRlGT~a~TtRG~~e 71 (144)
|++++. ...+.++++++... +.++.++.+.| ++.||.+..... +... .+..++.|||+.. .++
T Consensus 307 g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~------~~~ 379 (411)
T 2o0r_A 307 GFAVHD-SYGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFC------KRD 379 (411)
T ss_dssp TCEECC-CCBSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECC------SCH
T ss_pred CCEecC-CCeeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEec------CCH
Confidence 455542 22355788888653 25677776655 688999875322 1110 0112356999963 267
Q ss_pred HHHHHHHHHHHHHH
Q 032257 72 EDFAKVAYFFDAAV 85 (144)
Q Consensus 72 ~dm~~ia~~i~~~l 85 (144)
+|+.+..+.|.+++
T Consensus 380 e~i~~~~~~l~~~~ 393 (411)
T 2o0r_A 380 DTLDEAIRRLSVLA 393 (411)
T ss_dssp HHHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHHH
Confidence 88888777766654
No 100
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=69.62 E-value=18 Score=28.20 Aligned_cols=66 Identities=15% Similarity=0.206 Sum_probs=44.5
Q ss_pred cceeeEeccCCCCCHHHHHHHHh-hcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVLE-AVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~Le-~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
++++++++. .++++.++.+.|. +.||.+..-.-+ .....|||+....+ .+++|++++.+.|.+++.
T Consensus 315 ~~~~~~~~~-~~~~~~~~~~~L~~~~gi~v~~g~~~-----~~~~~~Ri~~~~~~---~~~e~i~~~~~~l~~~~~ 381 (393)
T 2huf_A 315 STVTTIKVP-QGVDWLKAAQYAMKTYLVEISGGLGP-----TAGQVFRIGLMGQN---ATTERVDRVLQVFQEAVA 381 (393)
T ss_dssp TTEEEEECC-TTCCHHHHHHHHHHHHCEECBCCCGG-----GTTTEEEEECCGGG---CSHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcC-CCCCHHHHHHHHHHhCCEEEecCccc-----ccCCEEEEEcccCc---CCHHHHHHHHHHHHHHHH
Confidence 457778764 3678888887775 569998642211 12357999973332 256889999998888774
No 101
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=69.04 E-value=25 Score=27.54 Aligned_cols=66 Identities=23% Similarity=0.242 Sum_probs=44.4
Q ss_pred cceeeEeccCCCCCHHHHHHHHhh-cCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVLEA-VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~Le~-~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
.+++.+.+. .+.+..++.+.|.+ .||.+.... .+..++.|||+.....+ .+++++++.+.|.+++.
T Consensus 322 ~~~~~~~~~-~~~~~~~l~~~L~~~~gi~v~~g~-----~~~~~~~iRi~~~~~~~---~~e~i~~~~~~l~~~~~ 388 (416)
T 3isl_A 322 PVVTCVEIP-GGIDGESVRDMLLAQFGIEIASSF-----GPLAGKIWRIGTMGYSC---RKENVLFVLAGLEAVLL 388 (416)
T ss_dssp TTEEEEECC-TTCCHHHHHHHHHHHHCEECBCCC-----STTTTTEEEEECCGGGC---SHHHHHHHHHHHHHHHH
T ss_pred CcEEEEeCC-CCCCHHHHHHHHHHhCCEEEecCC-----CCCCCCEEEEecccCCC---cHHHHHHHHHHHHHHHH
Confidence 466667653 36688888888755 599987432 12234679999754433 24449999999988885
No 102
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=68.70 E-value=17 Score=29.44 Aligned_cols=72 Identities=13% Similarity=0.018 Sum_probs=43.9
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|++++....--|.+.+.+ +.+..++.+.|.+.||.+... |+.- +.++.|||+....+ +++|+.++.+.|
T Consensus 365 g~~~~~~~~~~~~~~~~~---~~~~~~~~~~L~~~gi~v~~~--~~~~--~~~~~lRis~~~~~----t~edi~~~~~~l 433 (438)
T 1wyu_A 365 GVRPFTPKPFFNEFALAL---PKDPEAVRRALAERGFHGATP--VPRE--YGENLALFAATELH----EEEDLLALREAL 433 (438)
T ss_dssp TCEECSCSSBCSEEEEEC---SSCHHHHHHHHHHTTCCCCEE--CCTT--SCSSEEEEECCTTC----CHHHHHHHHHHH
T ss_pred CeEECCCCCeEEEEEEeC---CCCHHHHHHHHHHCCceeccc--cccc--cCCCeEEEEecccC----CHHHHHHHHHHH
Confidence 677765332234444543 357888888888889988210 1110 11467999986544 458888877776
Q ss_pred HHH
Q 032257 82 DAA 84 (144)
Q Consensus 82 ~~~ 84 (144)
.++
T Consensus 434 ~~~ 436 (438)
T 1wyu_A 434 KEV 436 (438)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 103
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=68.60 E-value=8.2 Score=30.46 Aligned_cols=70 Identities=21% Similarity=0.251 Sum_probs=44.9
Q ss_pred cceeeEeccC-CCCCHHHHHHHHhhcCceeecccCCCCCCC-C--------------CCCceeecchhhhhcCCCHHHHH
Q 032257 12 NHLVLVNLKN-KGIDGSRVEKVLEAVHIAANKNTVPGDVSA-M--------------VPGGIRMGTPALTSRGFVEEDFA 75 (144)
Q Consensus 12 ~Hlvlvdl~~-~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~-~--------------~~sgiRlGT~a~TtRG~~e~dm~ 75 (144)
.|++.+.+.. .+++..++.+.|.+.||.+..-..|-...+ + ....|||.. ...++++|++
T Consensus 305 ~~~~~i~~~~~~~~~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~----~~~~t~edi~ 380 (391)
T 3dr4_A 305 FWMYTVRLGEGLSTTRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPT----HAGLTEADID 380 (391)
T ss_dssp CSSEEEEECSSCSSCHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECC----CTTCCHHHHH
T ss_pred eEEEEEEECCccchhHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccC----CCCCCHHHHH
Confidence 3566776643 377899999999999999885433322111 0 113466653 3456889999
Q ss_pred HHHHHHHHHH
Q 032257 76 KVAYFFDAAV 85 (144)
Q Consensus 76 ~ia~~i~~~l 85 (144)
.+++.|.+++
T Consensus 381 ~~~~~l~~~l 390 (391)
T 3dr4_A 381 RVIAALDQVL 390 (391)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHHHh
Confidence 9998876543
No 104
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=68.27 E-value=12 Score=29.92 Aligned_cols=68 Identities=19% Similarity=0.260 Sum_probs=41.5
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHH-HHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSR-VEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~-~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~ 80 (144)
|+++.. +.....+++++. +.+..+ ++.+|++.||.+..-..++. ..++.|||+. +..++++.+..+.
T Consensus 353 g~~~~~-~~~~~~~~~~~~--~~~~~~~~~~ll~~~gv~v~~g~~f~~---~~~~~iRis~------~~~~e~l~~~l~r 420 (432)
T 3ei9_A 353 GYDVYG-GKNAPYVWVHFP--NQSSWDVFAEILEKTHVVTTPGSGFGP---GGEGFVRVSA------FGHRENILEACRR 420 (432)
T ss_dssp TCCEEE-CSSSSEEEEECT--TSCHHHHHHHHHHHHCEECEEGGGGCG---GGTTEEEEEC------CSCHHHHHHHHHH
T ss_pred CceecC-CCcceEEEEECC--CCCHHHHHHHHHHHCCEEEeCchHhCC---CCCCEEEEEe------cCCHHHHHHHHHH
Confidence 555553 345667899987 556655 55667888999876443331 1235799994 2356666555444
Q ss_pred H
Q 032257 81 F 81 (144)
Q Consensus 81 i 81 (144)
|
T Consensus 421 l 421 (432)
T 3ei9_A 421 F 421 (432)
T ss_dssp H
T ss_pred H
Confidence 3
No 105
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=67.05 E-value=5.5 Score=31.71 Aligned_cols=78 Identities=10% Similarity=0.033 Sum_probs=46.1
Q ss_pred CCeeeeCCCccceeeEeccCCC--C-----------CHHHHHHHHhhcCceeecccCCCCC--CCCCCCceeecchhhhh
Q 032257 2 GYELVSGGTENHLVLVNLKNKG--I-----------DGSRVEKVLEAVHIAANKNTVPGDV--SAMVPGGIRMGTPALTS 66 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~g--i-----------~g~~~~~~Le~~gI~vnkn~lP~d~--~~~~~sgiRlGT~a~Tt 66 (144)
|++++. .....++++++...+ . +...++.+|++.||.+..-...+.. .+...+.+||+...
T Consensus 328 g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~--- 403 (422)
T 3fvs_A 328 GLKPII-PQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVK--- 403 (422)
T ss_dssp TCEEEB-CSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCC---
T ss_pred CCeecC-CCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecC---
Confidence 455443 234567888875421 1 1244556688899998753221111 11234679998322
Q ss_pred cCCCHHHHHHHHHHHHHHHH
Q 032257 67 RGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 67 RG~~e~dm~~ia~~i~~~l~ 86 (144)
+++++++..+.|.+++.
T Consensus 404 ---~~e~i~~~l~~l~~~l~ 420 (422)
T 3fvs_A 404 ---DEATLQAMDEKLRKWKV 420 (422)
T ss_dssp ---CHHHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHHh
Confidence 88999888888777663
No 106
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=66.99 E-value=11 Score=29.92 Aligned_cols=64 Identities=5% Similarity=-0.010 Sum_probs=44.1
Q ss_pred cceeeEeccC-------CCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKN-------KGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAA 84 (144)
Q Consensus 12 ~Hlvlvdl~~-------~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~ 84 (144)
..++++++.. .+.+..++.+.|.+.||.+..... .++.|||+.+. ..+++|++++.+.|.++
T Consensus 352 g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~-------~~~~iRi~~~~----~~~~~~i~~~~~~l~~~ 420 (426)
T 1sff_A 352 GAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGP-------YYNVLRILVPL----TIEDAQIRQGLEIISQC 420 (426)
T ss_dssp TTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEEST-------TSCEEEECCCT----TCCHHHHHHHHHHHHHH
T ss_pred EEEEEEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCC-------CCCEEEEECCc----cCCHHHHHHHHHHHHHH
Confidence 6788898852 234466677777788999874221 13679998542 35679999888888777
Q ss_pred HH
Q 032257 85 VK 86 (144)
Q Consensus 85 l~ 86 (144)
+.
T Consensus 421 l~ 422 (426)
T 1sff_A 421 FD 422 (426)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 107
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=66.72 E-value=8 Score=31.18 Aligned_cols=75 Identities=11% Similarity=0.043 Sum_probs=43.3
Q ss_pred Ccccee-eEeccCCCCCHHHHHHHHhhcCceeeccc-CCCCCCCCCCCceeecchhhh------------hcCCCHHHHH
Q 032257 10 TENHLV-LVNLKNKGIDGSRVEKVLEAVHIAANKNT-VPGDVSAMVPGGIRMGTPALT------------SRGFVEEDFA 75 (144)
Q Consensus 10 Td~Hlv-lvdl~~~gi~g~~~~~~Le~~gI~vnkn~-lP~d~~~~~~sgiRlGT~a~T------------tRG~~e~dm~ 75 (144)
..+|++ .+-+ +.+.+..++.+.|.+.||.+.... .|-...+...+ ...+....| -..++++|++
T Consensus 285 ~~~~~~~~~~~-~~~~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~ 362 (377)
T 3ju7_A 285 AVIQQFMPILC-PEEVRNKQVIEDLKKQKIEARLYFSPSCHQQVLFRN-YKSTDLTRTNKIAKRIVSLPLWEGMTKEIVE 362 (377)
T ss_dssp CBCCSSEEEEC-CTTSCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTT-SCBSCCHHHHHHHHHEEEECCCTTCCHHHHH
T ss_pred cceEEEEEEEe-CChhhHHHHHHHHHHCCCceecccCCccccchhhhc-CCCCCCHHHHHHHhCEEECCCCCCCCHHHHH
Confidence 456665 3433 334468999999999999998754 23222111111 112222222 3478899999
Q ss_pred HHHHHHHHHHH
Q 032257 76 KVAYFFDAAVK 86 (144)
Q Consensus 76 ~ia~~i~~~l~ 86 (144)
.|++.|.+++.
T Consensus 363 ~v~~~l~~~~~ 373 (377)
T 3ju7_A 363 QIVICLGQKVV 373 (377)
T ss_dssp HHHHHHTC---
T ss_pred HHHHHHHHHHh
Confidence 99998877663
No 108
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=66.35 E-value=4 Score=31.69 Aligned_cols=77 Identities=13% Similarity=0.220 Sum_probs=49.0
Q ss_pred CCeeeeCC-CccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCC-CCCCCCcee-ecchhhhhcCCCHHHHHHHH
Q 032257 2 GYELVSGG-TENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIR-MGTPALTSRGFVEEDFAKVA 78 (144)
Q Consensus 2 G~~vv~gg-Td~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~-~~~~~sgiR-lGT~a~TtRG~~e~dm~~ia 78 (144)
|++++... ...+++++++. +..++.+.|.+.||.+.. ..+... ....++.+| |+.... ..+++|++++.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~---~~~~~~i~~~~ 360 (371)
T 2e7j_A 289 GIKQLGDNPHNHDLMFFHAE----VLYEISKKAKGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTY---GLSDEEVDYVL 360 (371)
T ss_dssp TCEEESSSSCCSSEEEEECH----HHHHHHHHSSSGGGHHHH-HHHHTTEECSCTTCCSEEEEECT---TCCHHHHHHHH
T ss_pred CcEEecCCCccCceEEEECC----CHHHHHHHHHHCCEEEEe-ccccccccCCCCCceEEEEeecc---CCCHHHHHHHH
Confidence 45555321 14678999875 577788888899999864 221110 011246799 886432 14689999998
Q ss_pred HHHHHHHH
Q 032257 79 YFFDAAVK 86 (144)
Q Consensus 79 ~~i~~~l~ 86 (144)
+.|.+++.
T Consensus 361 ~~l~~~~~ 368 (371)
T 2e7j_A 361 NAFKEIIE 368 (371)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877763
No 109
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=65.57 E-value=24 Score=27.78 Aligned_cols=60 Identities=7% Similarity=0.065 Sum_probs=43.9
Q ss_pred cceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
..++++++.. +.+..++.+.|.+.||.+... . +..+||+.+. ..+++|++++.+.|.+++
T Consensus 335 g~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~~----~-----~~~iRis~~~----~~~~e~i~~~~~~l~~~l 394 (397)
T 2ord_A 335 GLMIGIQFRE-EVSNREVATKCFENKLLVVPA----G-----NNTIRFLPPL----TVEYGEIDLAVETLKKVL 394 (397)
T ss_dssp TTEEEEEECT-TSCHHHHHHHHHHTTEECEEE----T-----TTEEEECCCT----TCCHHHHHHHHHHHHHHH
T ss_pred eEEEEEEECC-hHHHHHHHHHHHHCCCEEccC----C-----CCEEEEECCc----CCCHHHHHHHHHHHHHHH
Confidence 4677888754 346788888888899988742 1 3579999543 457899998888877766
No 110
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=65.43 E-value=5.8 Score=30.71 Aligned_cols=51 Identities=16% Similarity=0.244 Sum_probs=33.6
Q ss_pred cceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
...+++++.. .+..++.+.|.+.||.+.. .++.+||+.. .++|++++.+.+
T Consensus 281 ~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~----------~~~~iRis~~-------~~~~i~~~~~~l 331 (335)
T 1uu1_A 281 GNFVFVFMEK--EEKERLLEHLRTKNVAVRS----------FREGVRITIG-------KREENDMILREL 331 (335)
T ss_dssp SSEEEEECCT--HHHHHHHHHHHHHTEEEEE----------ETTEEEEECC-------CHHHHHHHHHHH
T ss_pred CeEEEEECCC--CCHHHHHHHHHHCCEEEEE----------CCCeEEEEeC-------CHHHHHHHHHHH
Confidence 4567888753 4567777888888999975 1356999962 145555554443
No 111
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=64.66 E-value=20 Score=28.58 Aligned_cols=77 Identities=10% Similarity=0.020 Sum_probs=46.1
Q ss_pred CCeeeeCCCccceeeEeccCCC-----------CCHHHHHHHH-hhcCceeecccCCCCCC--CCCCCceeecchhhhhc
Q 032257 2 GYELVSGGTENHLVLVNLKNKG-----------IDGSRVEKVL-EAVHIAANKNTVPGDVS--AMVPGGIRMGTPALTSR 67 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~g-----------i~g~~~~~~L-e~~gI~vnkn~lP~d~~--~~~~sgiRlGT~a~TtR 67 (144)
|++++. .....++++++.... .+..++.+.| ++.||.+......+... ...++.|||+..
T Consensus 336 g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~----- 409 (429)
T 1yiz_A 336 GMNPTV-PQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFF----- 409 (429)
T ss_dssp TCEEEE-CSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECC-----
T ss_pred CCcccC-CCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEec-----
Confidence 455543 223568888986531 3455655554 68999987432111100 011457999975
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 032257 68 GFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 68 G~~e~dm~~ia~~i~~~l 85 (144)
..++++++..+.|.+++
T Consensus 410 -~~~e~i~~~l~~l~~~l 426 (429)
T 1yiz_A 410 -KKDENLQKAAEILRKWK 426 (429)
T ss_dssp -SCHHHHHHHHHHHHHHS
T ss_pred -CCHHHHHHHHHHHHHhc
Confidence 27888888888877665
No 112
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=63.76 E-value=24 Score=28.05 Aligned_cols=71 Identities=7% Similarity=0.079 Sum_probs=46.2
Q ss_pred ceeeEeccC---CCCCHHHHHHHHhhc-Cce---eecccCCCCC-CCC-----------------------C-------C
Q 032257 13 HLVLVNLKN---KGIDGSRVEKVLEAV-HIA---ANKNTVPGDV-SAM-----------------------V-------P 54 (144)
Q Consensus 13 Hlvlvdl~~---~gi~g~~~~~~Le~~-gI~---vnkn~lP~d~-~~~-----------------------~-------~ 54 (144)
|++.+++.. .+++..++.+.|.+. ||. +..-..|... +.. . .
T Consensus 304 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (418)
T 2c81_A 304 YGYVFRFDPVKFGGLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASG 383 (418)
T ss_dssp SEEEEEECGGGTTTCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHH
T ss_pred EEEEEEEccccccccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHh
Confidence 555577753 367889999988888 999 7754333211 000 0 1
Q ss_pred CceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 55 GGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 55 sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
+.|||.....+ .+++|++.+.+.|.+++.
T Consensus 384 ~~lrl~~~~~~---gt~edi~~~~~~l~~~~~ 412 (418)
T 2c81_A 384 QSIVIHHAILL---AEPSHLSLLVDAVAELAR 412 (418)
T ss_dssp HEEEEEGGGGG---SCHHHHHHHHHHHHHHHH
T ss_pred CEEEecCCccC---CCHHHHHHHHHHHHHHHH
Confidence 46888865443 168999999998877764
No 113
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=63.50 E-value=25 Score=27.42 Aligned_cols=65 Identities=18% Similarity=0.237 Sum_probs=44.4
Q ss_pred cceeeEeccCCCCCHHHHHHHH-hhcCceeecccCCCCCCCCCCCceeecc-hhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGT-PALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~L-e~~gI~vnkn~lP~d~~~~~~sgiRlGT-~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
.+++++.+. .+++..++.+.| ++.||.+....- +.....|||+. ...| +++|++++.+.|.+++.
T Consensus 322 ~~~~~~~~~-~~~~~~~l~~~l~~~~gi~v~~g~~-----~~~~~~iRi~~~~~~~----~~~~i~~~~~~l~~~l~ 388 (411)
T 3nnk_A 322 NNVLGVVIP-QGINGDQARKLMLEDFGIEIGTSFG-----PLHGKVWRIGTMGYNA----RKDCVMTTLSALEAVLN 388 (411)
T ss_dssp SSEEEEECC-TTCCHHHHHHHHHHHHSEEEEECCG-----GGTTTEEEEECCGGGC----SHHHHHHHHHHHHHHHH
T ss_pred ccEEEEECC-CCCCHHHHHHHHHHhcCeEEeCccC-----CCCCCEEEEeCccCcC----CHHHHHHHHHHHHHHHH
Confidence 466677653 367888887776 556999874321 11235799996 4443 46899999999988885
No 114
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=63.42 E-value=25 Score=28.79 Aligned_cols=68 Identities=15% Similarity=0.130 Sum_probs=44.8
Q ss_pred cceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
..++|+++.. +++..++.+.|.+.||.+..-...+ ..+..+..+||+.... +++++++..+.|.+++.
T Consensus 376 g~~~~v~~~~-~~~~~~l~~~l~~~gV~v~pg~~f~-~~~~~~~~iRls~~~~-----~~e~i~~~~~~L~~~l~ 443 (448)
T 3aow_A 376 GMFIWVTLPD-GIDSKKMLERAIKKGVAYVPGEAFY-AHRDVKNTMRLNFTYV-----DEDKIMEGIKRLAETIK 443 (448)
T ss_dssp SSEEEEECST-TCCHHHHHHHHHHTTEECEEGGGGS-TTCCCCSEEEEECSSS-----CTHHHHHHHHHHHHHHH
T ss_pred cEEEEEEcCC-CCCHHHHHHHHHHCCcEEEcchhhc-CCCCCCCEEEEEeCCC-----CHHHHHHHHHHHHHHHH
Confidence 4577888753 6678877777777799987532111 1111245799996432 67889888888777764
No 115
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=63.38 E-value=32 Score=26.85 Aligned_cols=72 Identities=17% Similarity=0.096 Sum_probs=42.1
Q ss_pred CCeeeeCCCccceeeEeccCCC-CCHHHHHHHH-hhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKG-IDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAY 79 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~g-i~g~~~~~~L-e~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~ 79 (144)
|++++. ...++++++++...+ .+..++.+.| ++.||.+......+ ..+..++.+||+.. ..++|+++..+
T Consensus 310 g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~-~~~~~~~~iRis~~------~~~~~i~~~~~ 381 (386)
T 1u08_A 310 RLEILP-CEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFC-ADPFPHKLIRLCFA------KKESTLLAAAE 381 (386)
T ss_dssp SCEECC-CCBSSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGC-SSCCCSCEEEEECC------SCHHHHHHHHH
T ss_pred CCeecC-CCceEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHhC-CCCCCCCEEEEEEc------CCHHHHHHHHH
Confidence 455442 223578889986532 5677776655 68999987532111 11123467999974 25677666555
Q ss_pred HH
Q 032257 80 FF 81 (144)
Q Consensus 80 ~i 81 (144)
.|
T Consensus 382 ~l 383 (386)
T 1u08_A 382 RL 383 (386)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 116
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=62.91 E-value=15 Score=28.77 Aligned_cols=56 Identities=23% Similarity=0.286 Sum_probs=37.9
Q ss_pred ccceeeEeccCCCCCHHHHHHHHhhcCceeecc-cCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHH
Q 032257 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKN-TVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 82 (144)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn-~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~ 82 (144)
....+++++. ++.++.+.|.+.||.+... ..++ .++.+||+.. .++|++++.+.+.
T Consensus 296 ~~~~~~~~~~----~~~~l~~~L~~~gI~v~~~g~~~~-----~~~~iRis~~-------~~~e~~~~~~~l~ 352 (356)
T 1fg7_A 296 ETNYILARFK----ASSAVFKSLWDQGIILRDQNKQPS-----LSGCLRITVG-------TREESQRVIDALR 352 (356)
T ss_dssp SSSEEEEEET----THHHHHHHHHHTTEECEECTTSTT-----CTTEEEEECC-------CHHHHHHHHHHHH
T ss_pred CCeEEEEECC----CHHHHHHHHHHCCEEEEECCCCCC-----CCCeEEEEeC-------CHHHHHHHHHHHH
Confidence 4556788875 6788888899999998752 2222 1346999964 3677777666543
No 117
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=61.78 E-value=14 Score=29.39 Aligned_cols=45 Identities=16% Similarity=0.167 Sum_probs=33.6
Q ss_pred CCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 23 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 23 gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
+++...+.++|++.||.+.. |+||+... .+++|++++.+.|.+++
T Consensus 364 ~~~~~~~~~ll~~~gv~v~p-------------~~Ri~~~~-----~~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 364 GLTREQVELLRSEYHIYMTL-------------NGRAAVSG-----LNSTNVEYVSQAIHNVT 408 (409)
T ss_dssp CCCHHHHHHHHHHHCEECCT-------------TCEEEGGG-----CCTTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCEEEcC-------------CCEEEEEe-----cCHhhHHHHHHHHHHHh
Confidence 45678888999999998873 46887643 45678888888877654
No 118
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=61.39 E-value=29 Score=26.62 Aligned_cols=79 Identities=16% Similarity=0.222 Sum_probs=48.0
Q ss_pred CCeeeeC--CCccceeeEeccCCCCCHHHHHHHHhhcCceeecccC--CCCCC--------CC----CCCceeecchhhh
Q 032257 2 GYELVSG--GTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTV--PGDVS--------AM----VPGGIRMGTPALT 65 (144)
Q Consensus 2 G~~vv~g--gTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~l--P~d~~--------~~----~~sgiRlGT~a~T 65 (144)
|++++.. +.-.+++.+.+. ++++.++.+.|.+.||.+..-.. +.... .. ..+.|||+...
T Consensus 280 g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~-- 355 (384)
T 1eg5_A 280 GAHIITPLEISLPNTLSVSFP--NIRGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCK-- 355 (384)
T ss_dssp TCEECSCTTSBCTTEEEEECT--TCCHHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCT--
T ss_pred CeEEeCCcccCCCCEEEEEeC--CCCHHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCC--
Confidence 4555432 223455666554 56888999999999999874211 10000 00 12469999643
Q ss_pred hcCCCHHHHHHHHHHHHHHHH
Q 032257 66 SRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 66 tRG~~e~dm~~ia~~i~~~l~ 86 (144)
..+++|++++.+.|.+++.
T Consensus 356 --~~~~~~i~~~~~~l~~~~~ 374 (384)
T 1eg5_A 356 --YNTEEEVDYFLKKIEEILS 374 (384)
T ss_dssp --TCCHHHHHHHHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHHHHHHH
Confidence 2468999999999888774
No 119
>1iqo_A Hypothetical protein MTH1880; beta-alpha, anti-parallel, calcium binding, structural genomics, metal binding protein; NMR {Methanothermobacter} SCOP: d.214.1.1 PDB: 1iqs_A
Probab=60.42 E-value=4.7 Score=27.55 Aligned_cols=35 Identities=29% Similarity=0.338 Sum_probs=27.7
Q ss_pred CCCccceeeEeccCCCCCHHHHHHHHhhcCceeeccc
Q 032257 8 GGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNT 44 (144)
Q Consensus 8 ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~ 44 (144)
-||.+|+|+. +.+.. +=.++.+-|+++|-.+|.++
T Consensus 46 ~gT~Sy~v~F-Ld~~~-~ieeIk~eL~~~~a~lN~dS 80 (88)
T 1iqo_A 46 KGTQSNHVLF-LSSYN-SVDEIRKELEEAGAKINHTT 80 (88)
T ss_dssp TTTTCCEEEE-CSCCC-SCHHHHHHHHHHHHCSSCCC
T ss_pred cCCceEEEEE-EeCCC-CHHHHHHHHHHcCccccccH
Confidence 6899988885 33333 77899999999999999864
No 120
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=60.08 E-value=16 Score=29.43 Aligned_cols=82 Identities=11% Similarity=0.116 Sum_probs=48.2
Q ss_pred CCeeeeCCCccceeeEeccC--CCCCHHHH-----HHHH-hhcCceeeccc---CCCCC-----CCCCCCceeecchhhh
Q 032257 2 GYELVSGGTENHLVLVNLKN--KGIDGSRV-----EKVL-EAVHIAANKNT---VPGDV-----SAMVPGGIRMGTPALT 65 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~--~gi~g~~~-----~~~L-e~~gI~vnkn~---lP~d~-----~~~~~sgiRlGT~a~T 65 (144)
|++++. -...+.+++++.. .+++..+. .+.| ++.||.+.... .|..+ .....+.|||+.+.
T Consensus 333 g~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~-- 409 (456)
T 2ez2_A 333 GVPIVE-PVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPR-- 409 (456)
T ss_dssp TCCBCS-SCCSSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCT--
T ss_pred CCcccc-CCCceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCC--
Confidence 455443 2346888888742 24444443 4444 78899753211 12111 11123579998654
Q ss_pred hcCCCHHHHHHHHHHHHHHHHh
Q 032257 66 SRGFVEEDFAKVAYFFDAAVKL 87 (144)
Q Consensus 66 tRG~~e~dm~~ia~~i~~~l~~ 87 (144)
-..+++|++++.+.|.+++..
T Consensus 410 -~~~t~e~i~~~~~~l~~~l~~ 430 (456)
T 2ez2_A 410 -RVYTYAHMDVVADGIIKLYQH 430 (456)
T ss_dssp -TTCCHHHHHHHHHHHHHHHHT
T ss_pred -CCCCHHHHHHHHHHHHHHHhh
Confidence 236789999999999888753
No 121
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=59.58 E-value=20 Score=28.47 Aligned_cols=54 Identities=19% Similarity=0.217 Sum_probs=40.4
Q ss_pred eeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 14 LVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 14 lvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
.+++++. +..++.+.|.+.||.+.. + ++.+||+.. +.+++++++..+.|.+++.
T Consensus 360 ~~~~~~~----~~~~~~~~l~~~gi~v~~----g------~~~iRis~~-----~~~~~~i~~~~~~l~~~l~ 413 (418)
T 3rq1_A 360 FITIPTD----SANAICEELKKEHIYVIA----L------ANGIRIAAC-----GIPKCQMTGLAEKIYNAMK 413 (418)
T ss_dssp EEEEECT----THHHHHHHHHHTTEECEE----C------SSEEEEEGG-----GSCHHHHTTHHHHHHHHHH
T ss_pred EEEcCCC----CHHHHHHHHHhCCEEEec----C------CCCeEEEEe-----cCCHHHHHHHHHHHHHHHH
Confidence 4556652 678888999999999864 2 256999832 3578999999988888774
No 122
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=59.02 E-value=19 Score=28.54 Aligned_cols=73 Identities=21% Similarity=0.225 Sum_probs=42.3
Q ss_pred CCeeeeCCCccceeeEe-ccCCCCCHHHH-HHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVN-LKNKGIDGSRV-EKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAY 79 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvd-l~~~gi~g~~~-~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~ 79 (144)
|+++.. +....+++++ +. .+++..++ ++++++.||.+..-...+ . ..++.+||+. ..+++++++..+
T Consensus 316 g~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~gv~v~~g~~f~-~--~~~~~iRis~------~~~~e~i~~~l~ 384 (400)
T 3asa_A 316 GFEVFG-GEHAPYLWVKPTQ-ANISDRDLFDFFLREYHIAITPGIGFG-R--SGSGFVRFSS------LGKREDILAACE 384 (400)
T ss_dssp TCEEEE-CSSSSEEEEECCC-TTCCTTTHHHHHHHHHSEECEEGGGGC-G--GGTTCEEEEC------CSCHHHHHHHHH
T ss_pred CCeeeC-CCCceEEEEeccC-CCCCHHHHHHHHHHhCCEEEeChhHhC-C--CCCCEEEEEe------eCCHHHHHHHHH
Confidence 555553 2335678888 64 35555444 455677899987532211 1 1135699983 135788887777
Q ss_pred HHHHHH
Q 032257 80 FFDAAV 85 (144)
Q Consensus 80 ~i~~~l 85 (144)
.|.+++
T Consensus 385 ~l~~~~ 390 (400)
T 3asa_A 385 RLQMAP 390 (400)
T ss_dssp HHHC--
T ss_pred HHHHHH
Confidence 766655
No 123
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=58.74 E-value=21 Score=27.92 Aligned_cols=71 Identities=8% Similarity=-0.027 Sum_probs=43.6
Q ss_pred cceeeEeccCC-CCCHHHHHHHHhhcCceeecccCCCCCCC------------------C------CCCceeecchhhhh
Q 032257 12 NHLVLVNLKNK-GIDGSRVEKVLEAVHIAANKNTVPGDVSA------------------M------VPGGIRMGTPALTS 66 (144)
Q Consensus 12 ~Hlvlvdl~~~-gi~g~~~~~~Le~~gI~vnkn~lP~d~~~------------------~------~~sgiRlGT~a~Tt 66 (144)
.|++++++... +.+..++.+.|.+.||.+....-|.-..+ + ..+.|||+..
T Consensus 290 ~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~---- 365 (388)
T 1b9h_A 290 HYMAMFRIPGLTEERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHR---- 365 (388)
T ss_dssp CSEEEEECTTCCHHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGG----
T ss_pred eEEEEEEeCCcCcccHHHHHHHHHHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCC----
Confidence 57888988642 12567788888889999975432211000 0 0023566543
Q ss_pred cCC-CHHHHHHHHHHHHHHHH
Q 032257 67 RGF-VEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 67 RG~-~e~dm~~ia~~i~~~l~ 86 (144)
..+ +++|++.+++.|.+++.
T Consensus 366 ~~~~t~edi~~~~~~l~~~~~ 386 (388)
T 1b9h_A 366 VLLAGEPELHATAEIIADAVA 386 (388)
T ss_dssp GGGSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHh
Confidence 344 68899999888877663
No 124
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=58.64 E-value=22 Score=27.91 Aligned_cols=73 Identities=18% Similarity=0.162 Sum_probs=44.9
Q ss_pred CCeeeeC-CCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCC------CCCCCCCCCceeecchhhhhcCCCHHHH
Q 032257 2 GYELVSG-GTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVP------GDVSAMVPGGIRMGTPALTSRGFVEEDF 74 (144)
Q Consensus 2 G~~vv~g-gTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP------~d~~~~~~sgiRlGT~a~TtRG~~e~dm 74 (144)
|+++... .+...++++.+. ++++.++.+.|.+.||.+..-.-+ +.. ...+.|||+....+ +++|+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~~~gi~v~~g~~~~~~~~~g~~--~~~~~iRis~~~~~----t~e~i 395 (406)
T 3cai_A 324 LVMLIGRPEAQIPVVSFAVH--KVPADRVVQRLADNGILAIANTGSRVLDVLGVN--DVGGAVTVGLAHYS----TMAEV 395 (406)
T ss_dssp TEEECCCCSSBCSEEEEEET--TBCHHHHHHHHHHTTEECEECCSCHHHHHHTTT--TTTCCEEEECCTTC----CHHHH
T ss_pred CeEEcCCccccCCEEEEEEC--CcCHHHHHHHHHHCCcEEecCChHHHHHHcCCC--CCCCeEEEEeecCC----CHHHH
Confidence 4454432 123446667664 467888999999999998753200 100 01357999976543 57888
Q ss_pred HHHHHHHH
Q 032257 75 AKVAYFFD 82 (144)
Q Consensus 75 ~~ia~~i~ 82 (144)
+++.+.|.
T Consensus 396 ~~~~~~l~ 403 (406)
T 3cai_A 396 DQLVRALA 403 (406)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88777654
No 125
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=58.59 E-value=16 Score=30.08 Aligned_cols=68 Identities=12% Similarity=0.200 Sum_probs=45.3
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|++++... |...+++++. |+++.++.+.|.+.||.+.. ++ .+.|||.... +.+++|+ ++.+.+
T Consensus 284 g~~~~~~~-~~~~l~i~~~--~~~~~~l~~~L~~~GI~v~~---~g------~~~iRi~~~~----~~t~e~i-~l~~aL 346 (446)
T 2x3l_A 284 GFEMLQVD-DPLKLLIKYE--GFTGHDIQNWFMNAHIYLEL---AD------DYQALAILPL----WHHDDTY-LFDSLL 346 (446)
T ss_dssp TCEEEECS-STTEEEEECT--TSCHHHHHHHHHHTTEEESE---EC------SSCEEEECCC----CCTTCCC-CHHHHH
T ss_pred CCEECcCC-CCeEEEEEeC--CcCHHHHHHHHHHCCCEEEe---cC------CCEEEEEeec----CCCHHHH-HHHHHH
Confidence 45665422 4445788876 78999999999888999863 22 1469998653 3355677 766666
Q ss_pred HHHHH
Q 032257 82 DAAVK 86 (144)
Q Consensus 82 ~~~l~ 86 (144)
.+++.
T Consensus 347 ~~~~~ 351 (446)
T 2x3l_A 347 RKIED 351 (446)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 66553
No 126
>1ybx_A Conserved hypothetical protein; ST genomics, PSI, protein structure initiative, southeast COLL for structural genomics, secsg; HET: MSE; 1.80A {Clostridium thermocellum}
Probab=58.40 E-value=12 Score=27.55 Aligned_cols=44 Identities=11% Similarity=0.107 Sum_probs=25.5
Q ss_pred CCHHHHHHHHHHHHHHHHhhhhhhhhcccchhhhHHhhhcccccHHHHHHHHHHHHHHHhhCCC-CCC
Q 032257 69 FVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCHDVEEYAKQFPT-IGF 135 (144)
Q Consensus 69 ~~e~dm~~ia~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~V~~l~~~fPi-~~~ 135 (144)
+.++|.+.+.++|..|+..|.+ ..-+..+++..+++..+++ |++
T Consensus 98 ldpeD~E~LeDLI~aAvNdA~~-----------------------ka~e~~~e~M~~ltgGl~lpPG~ 142 (143)
T 1ybx_A 98 VDPDDVEMLQDLILAAVNEALR-----------------------KADEMVTAEISKITGGLGGIPGL 142 (143)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHH-----------------------HHHHHHHHHHHHHC---------
T ss_pred cCCcCHHHHHHHHHHHHHHHHH-----------------------HHHHHHHHHHHHHhCCCCCCCCC
Confidence 4568999999999999975422 1223466778888888887 653
No 127
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=58.14 E-value=29 Score=27.60 Aligned_cols=76 Identities=11% Similarity=0.066 Sum_probs=45.3
Q ss_pred CCeeeeCCCccceeeEeccCCC-----CCHHHHHHHH-hhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKG-----IDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFA 75 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~g-----i~g~~~~~~L-e~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~ 75 (144)
|++++. +....++++++.... .+..++.+.| ++.||.+......+.. .++.+||+... .+++|++
T Consensus 344 g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~---~~~~iRis~~~-----~~~e~i~ 414 (428)
T 1iay_A 344 GIKCLK-NNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQ---EPGWFRVCFAN-----MDDGTVD 414 (428)
T ss_dssp TCCBCC-CSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCS---SSSEEEEECSS-----SCHHHHH
T ss_pred CCcccC-CCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCC---CCCEEEEEEec-----CCHHHHH
Confidence 444432 223457788876421 1233444555 5569998753322111 13579999752 5789999
Q ss_pred HHHHHHHHHHH
Q 032257 76 KVAYFFDAAVK 86 (144)
Q Consensus 76 ~ia~~i~~~l~ 86 (144)
++.+.|.+++.
T Consensus 415 ~~~~~l~~~l~ 425 (428)
T 1iay_A 415 IALARIRRFVG 425 (428)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99888877764
No 128
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=57.97 E-value=22 Score=28.36 Aligned_cols=73 Identities=12% Similarity=0.153 Sum_probs=43.5
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHH-HhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKV-LEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~-Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~ 80 (144)
|++++. ..-+.++++++. .+++..++.+. +++.||.+..-...+. ..++.+||+... .++++.+..+.
T Consensus 327 g~~~~~-~~~g~~~~~~~~-~~~~~~~l~~~l~~~~gi~v~~g~~f~~---~~~~~iRis~~~------~~e~l~~~l~~ 395 (404)
T 2o1b_A 327 DLPFVH-AKGGIYVWLETP-PGYDSEQFEQFLVQEKSILVAPGKPFGE---NGNRYVRISLAL------DDQKLDEAAIR 395 (404)
T ss_dssp TCCEEC-CCBSSEEEEECC-TTCCHHHHHHHHHHHHCEECEESGGGCG---GGTTEEEEECCS------CTTHHHHHHHH
T ss_pred CCeecC-CCcceEEEEeCC-CCCCHHHHHHHHHHHCCEEEeCchhhCc---CCCCeEEEEEcC------CHHHHHHHHHH
Confidence 455442 222445788875 35677776665 4578999875322211 123579999763 46677777666
Q ss_pred HHHHH
Q 032257 81 FDAAV 85 (144)
Q Consensus 81 i~~~l 85 (144)
|.+++
T Consensus 396 l~~~l 400 (404)
T 2o1b_A 396 LTELA 400 (404)
T ss_dssp HHGGG
T ss_pred HHHHH
Confidence 65554
No 129
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=57.81 E-value=57 Score=25.64 Aligned_cols=73 Identities=14% Similarity=0.058 Sum_probs=43.6
Q ss_pred CCeeeeCCCccceeeEeccC----CCCCHHHHHHHH-hhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKN----KGIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAK 76 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~----~gi~g~~~~~~L-e~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ 76 (144)
|+.++. .....++++++.. .+.+..++.+.| ++.||.+......+ .++.+||+. +..++++.+
T Consensus 334 g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~-----~~~~iRis~------~~~~e~l~~ 401 (416)
T 1bw0_A 334 GLAPTM-PRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFH-----APGFTRLTT------TRPVEVYRE 401 (416)
T ss_dssp TEEECC-CCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGT-----CTTEEEEEC------CSCHHHHHH
T ss_pred CCcccC-CCeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccC-----CCCeEEEEe------cCCHHHHHH
Confidence 445442 2234556677642 124667765655 78999987533222 135799997 246777777
Q ss_pred HHHHHHHHHH
Q 032257 77 VAYFFDAAVK 86 (144)
Q Consensus 77 ia~~i~~~l~ 86 (144)
..+.|.+++.
T Consensus 402 ~l~~l~~~l~ 411 (416)
T 1bw0_A 402 AVERIKAFCQ 411 (416)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777666653
No 130
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=57.64 E-value=13 Score=29.54 Aligned_cols=60 Identities=12% Similarity=0.101 Sum_probs=37.8
Q ss_pred CCCHHHHHHHHhhcCceeecccCCCCC-CCCCC--------------CceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 23 GIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVP--------------GGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 23 gi~g~~~~~~Le~~gI~vnkn~lP~d~-~~~~~--------------sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
+++..++.+.|.+.||.+....-|... +.+.. .++|+.+ ...++++|++.+.+.|.+++.
T Consensus 311 ~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~t~edi~~~~~~l~~~~~ 385 (394)
T 1o69_A 311 HPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPS----GTAMSKDDVYEISKLILKSIK 385 (394)
T ss_dssp CHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECC----CTTCCHHHHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccC----CCCCCHHHHHHHHHHHHHHHh
Confidence 456788889999999998754322111 11110 2333332 355789999999999887764
No 131
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=57.25 E-value=22 Score=27.65 Aligned_cols=70 Identities=6% Similarity=0.032 Sum_probs=41.3
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|+++.. ....++++++.. +..++.+.|.+.||.+..-.-. .+..++.+||+.. .++|++++.+.+
T Consensus 289 ~~~~~~--~~g~~~~~~~~~---~~~~l~~~l~~~gi~v~~g~~~---~~~~~~~iRis~~-------~~~~~~~l~~~l 353 (364)
T 1lc5_A 289 LLTVYP--GRANYLLLRCER---EDIDLQRRLLTQRILIRSCANY---PGLDSRYYRVAIR-------SAAQNERLLAAL 353 (364)
T ss_dssp TEEECC--CSSSEEEEEESC---TTCCHHHHHHTTTEECEECTTS---TTCCTTEEEEECC-------CHHHHHHHHHHH
T ss_pred CCEECC--CCCeEEEEECCC---cHHHHHHHHHHCCcEEeeCccc---CCCCCCEEEEEeC-------CHHHHHHHHHHH
Confidence 445432 334567787753 2445666677779998742211 1122467999953 377888777777
Q ss_pred HHHHH
Q 032257 82 DAAVK 86 (144)
Q Consensus 82 ~~~l~ 86 (144)
.+++.
T Consensus 354 ~~~~~ 358 (364)
T 1lc5_A 354 RNVLT 358 (364)
T ss_dssp HHHC-
T ss_pred HHHhh
Confidence 66653
No 132
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=56.50 E-value=42 Score=27.18 Aligned_cols=62 Identities=16% Similarity=0.180 Sum_probs=44.3
Q ss_pred cceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
..++++++...+.+..++.+.|.+.||.+... ..+.|||..+. ..+++|++++.+.|.+++.
T Consensus 366 g~~~~i~~~~~~~~~~~~~~~l~~~Gv~v~~~---------~~~~iRi~~~~----~~t~e~i~~~l~~l~~~l~ 427 (433)
T 1z7d_A 366 GLLCAIEFKNELVNVLDICLKLKENGLITRDV---------HDKTIRLTPPL----CITKEQLDECTEIIVKTVK 427 (433)
T ss_dssp TTEEEEEECTTTCCHHHHHHHHHHTTEECCEE---------TTTEEEECCCT----TCCHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEEccChhHHHHHHHHHHHCCeEEecC---------CCCEEEEECCc----CCCHHHHHHHHHHHHHHHH
Confidence 46788887643245778888888889998742 13569996442 4578999999888877764
No 133
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=56.40 E-value=12 Score=28.85 Aligned_cols=42 Identities=14% Similarity=0.187 Sum_probs=29.6
Q ss_pred CCeeeeCCCccceeeEeccCC-CCCHHHHHHHHhhcCceeecc
Q 032257 2 GYELVSGGTENHLVLVNLKNK-GIDGSRVEKVLEAVHIAANKN 43 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~-gi~g~~~~~~Le~~gI~vnkn 43 (144)
|+++......++++++++... +.+...+.+.|.+.||.+..-
T Consensus 279 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g 321 (359)
T 3pj0_A 279 GVKTVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVGISGY 321 (359)
T ss_dssp TEEEESSSCSSSEEEEEESSCHHHHHHHHHHHHHHHCEECCSC
T ss_pred CceeeccCCcceEEEEEecCccchhHHHHHHHHHhcCcEecCC
Confidence 555543456778899988643 234667888999999998854
No 134
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=55.74 E-value=26 Score=28.30 Aligned_cols=59 Identities=12% Similarity=0.147 Sum_probs=40.3
Q ss_pred CCCHHHHHHHHhhcCceeecccCCCC--CCCCC-----------------CCceeecchhhhhcCCCHHHHHHHHHHHHH
Q 032257 23 GIDGSRVEKVLEAVHIAANKNTVPGD--VSAMV-----------------PGGIRMGTPALTSRGFVEEDFAKVAYFFDA 83 (144)
Q Consensus 23 gi~g~~~~~~Le~~gI~vnkn~lP~d--~~~~~-----------------~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~ 83 (144)
|++..++.+.|.+.||.+....-|.- .+... .+.|||+. ...++++|++.+++.|.+
T Consensus 356 ~~~~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~----~~~~t~~di~~i~~~l~~ 431 (437)
T 3bb8_A 356 GVSRIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGI----YPGLTHDHLDYVVSKFEE 431 (437)
T ss_dssp SSCHHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECC----STTCCHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEEEecC----CCCCCHHHHHHHHHHHHH
Confidence 67899999999999999875432210 01000 11377763 566789999999999877
Q ss_pred HH
Q 032257 84 AV 85 (144)
Q Consensus 84 ~l 85 (144)
++
T Consensus 432 ~~ 433 (437)
T 3bb8_A 432 FF 433 (437)
T ss_dssp HT
T ss_pred HH
Confidence 66
No 135
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=55.65 E-value=40 Score=27.08 Aligned_cols=63 Identities=16% Similarity=0.035 Sum_probs=44.6
Q ss_pred ccceeeEeccCC-CCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 11 ENHLVLVNLKNK-GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 11 d~Hlvlvdl~~~-gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
...++++++... +.+..++.+.|.+.||.+... . ++.|||..+. ..+++|++++.+.|.+++.
T Consensus 353 ~g~~~~v~~~~~~~~~~~~l~~~l~~~Gi~v~~~----~-----~~~iRl~~~~----~~t~eei~~~~~~l~~~l~ 416 (420)
T 2pb2_A 353 MGLLIGAELKPKYKGRARDFLYAGAEAGVMVLNA----G-----ADVMRFAPSL----VVEEADIHEGMQRFAQAVG 416 (420)
T ss_dssp ETTEEEEEECGGGTTCHHHHHHHHHHTTEECEES----S-----TTEEEECCCT----TCCHHHHHHHHHHHHHHHH
T ss_pred cceEEEEEECCCchHHHHHHHHHHHHCCCEEEeC----C-----CCEEEEECCC----CCCHHHHHHHHHHHHHHHH
Confidence 356778887532 235777888888899998742 1 3569998643 4578999999888877764
No 136
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=55.08 E-value=36 Score=26.32 Aligned_cols=63 Identities=11% Similarity=0.036 Sum_probs=39.9
Q ss_pred cceeeEeccCCCCCHHHHHHH-HhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKV-LEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~-Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
.+.+++.+. .+.+..+..+. |++.||.+..-..++. ++.+||+.. ..++++++..+.|.+++.
T Consensus 306 ~~~~~~~~~-~~~~~~~~~~~ll~~~gi~v~~g~~~~~-----~~~iRi~~~------~~~~~i~~~l~~l~~~l~ 369 (375)
T 3op7_A 306 VSTSFVKIA-VDMPMEDFCLQLLQEHGVLLVPGNRFER-----DGYVRLGFA------CEQETLIKGLEKLSQFLR 369 (375)
T ss_dssp SSCEEEEEC-CSSCHHHHHHHHHHHHCEECEEGGGGTC-----TTEEEECCC------SCHHHHHHHHHHHHHHHG
T ss_pred eEEEeEEcC-CCCCHHHHHHHHHHhCCEEEeChhhhCC-----CCeEEEEec------CCHHHHHHHHHHHHHHHH
Confidence 345566664 35566666555 4899999875333322 468999843 234778777777777664
No 137
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=54.98 E-value=56 Score=25.46 Aligned_cols=62 Identities=13% Similarity=0.077 Sum_probs=43.5
Q ss_pred cceeeEeccCC-CCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNK-GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 12 ~Hlvlvdl~~~-gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
.+++++++... ..++.++.+.|.+.||.+... .++.+||+.+. ..+++|++++.+.|.+++.
T Consensus 336 g~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~---------~~~~iRi~~~~----~~~~e~i~~~~~~l~~~l~ 398 (406)
T 4adb_A 336 GLLIGCVLNADYAGQAKQISQEAAKAGVMVLIA---------GGNVVRFAPAL----NVSEEEVTTGLDRFAAACE 398 (406)
T ss_dssp TTEEEEEECTTTTTCHHHHHHHHHHTTEECEES---------STTEEEECCCT----TCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEeCCcHHHHHHHHHHHHHCCcEEeec---------CCCeEEEECCC----CCCHHHHHHHHHHHHHHHH
Confidence 45666766431 126788888888889998742 14579997543 3568999999888888774
No 138
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=54.74 E-value=34 Score=26.78 Aligned_cols=58 Identities=24% Similarity=0.230 Sum_probs=41.0
Q ss_pred cceeeEeccCCCCCHHHHHHHHh-hcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVLE-AVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~Le-~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
.+++++++.. +..++.+.|. +.||.+... .++.|||+.+. ..+++|++++.+.|.+++
T Consensus 336 g~~~~~~~~~---~~~~l~~~l~~~~gi~v~~~---------~~~~iRi~~~~----~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 336 GLMVGLELKE---KAAPYIARLEKEHRVLALQA---------GPTVIRFLPPL----VIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp TTEEEEEESS---CSHHHHHHHHHHHCEECEES---------STTEEEECCCT----TCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEcC---hHHHHHHHHHHHCCeEEecC---------CCCEEEEeCCC----CCCHHHHHHHHHHHHHHh
Confidence 4688888753 2566667776 889998742 13579998542 457789988888876654
No 139
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=54.66 E-value=11 Score=29.06 Aligned_cols=78 Identities=8% Similarity=-0.029 Sum_probs=44.4
Q ss_pred CCeeeeCCCccceeeEeccCCC-CCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKG-IDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~g-i~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~ 80 (144)
|+++......++++++++...+ .+...+.+.|.+.||.+..-..+. + ..+.+|+..... .....++++.+.-+.
T Consensus 277 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~g~~~~---~-~~~~~r~~i~~~-~~~~~~~~l~~al~~ 351 (357)
T 3lws_A 277 GVHTTPEVPVSNMFHLHFDGQAADISPKLEQVQEETGLGFVGYLVDK---D-GYCSTEISVGDA-YGELDQQTRDAGFAR 351 (357)
T ss_dssp TEEEESSSCSSSEEEEEEESCHHHHHHHHHHHHHHHCEESCSCCEEC---S-SEEEEEEEBCTT-GGGSCHHHHHHHHHH
T ss_pred CCeeccCCCcceEEEEEecCChHHHHHHHHHHHHhcCeEEecccccC---C-CceEEEEEecch-hhhcCHHHHHHHHHH
Confidence 5555434567789999986432 135677888999999987532221 1 112578743221 112355666555555
Q ss_pred HHHH
Q 032257 81 FDAA 84 (144)
Q Consensus 81 i~~~ 84 (144)
|.++
T Consensus 352 l~~a 355 (357)
T 3lws_A 352 LRQA 355 (357)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 4443
No 140
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=54.58 E-value=19 Score=29.91 Aligned_cols=45 Identities=20% Similarity=0.303 Sum_probs=34.3
Q ss_pred CCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 23 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 23 gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
|++..++ ++|++.||.+- ++| ||..+ |++++.++.+|+-|+++++
T Consensus 371 gls~e~v-~~L~e~~Vy~~------------~~g-Ris~A-----gl~~~ni~~~a~aI~~vvr 415 (420)
T 4h51_A 371 GLSKAQC-EYCQNHNIFIT------------VSG-RANMA-----GLTHETALMLAQTINDAVR 415 (420)
T ss_dssp CCCHHHH-HHHHHTTEECC------------TTC-EEEGG-----GCCHHHHHHHHHHHHHHHC
T ss_pred CcCHHHH-HHHHhCCEEEc------------CCC-EEEec-----cCCHHHHHHHHHHHHHHHH
Confidence 6777776 46788898643 233 99865 5678999999999999985
No 141
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=54.33 E-value=51 Score=26.77 Aligned_cols=62 Identities=16% Similarity=0.150 Sum_probs=44.2
Q ss_pred cceeeEeccCC-CCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNK-GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 12 ~Hlvlvdl~~~-gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
..++++++... +.+..++.+.|.+.||.+.. . ..+.|||..+. ..+++|++++.+.|.+++.
T Consensus 375 g~~~~v~l~~~~~~~~~~l~~~l~~~Gv~v~~----~-----~~~~iRi~~~~----~~t~e~i~~~l~~l~~~l~ 437 (439)
T 2oat_A 375 GLLNAIVIKETKDWDAWKVCLRLRDNGLLAKP----T-----HGDIIRFAPPL----VIKEDELRESIEIINKTIL 437 (439)
T ss_dssp TTEEEEEECCCSSCCHHHHHHHHHHTTEECCB----S-----SSSEEEECCCT----TCCHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEEecCccHHHHHHHHHHHHCCeEEec----C-----CCCEEEEECcc----CCCHHHHHHHHHHHHHHHH
Confidence 46778887542 14677888888888999873 1 13569997542 4678999999888877763
No 142
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=49.83 E-value=26 Score=27.14 Aligned_cols=58 Identities=12% Similarity=0.058 Sum_probs=38.1
Q ss_pred CHHHHHHHHhhcCceeeccc-CCCCC-CCCC---------C-------CceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 25 DGSRVEKVLEAVHIAANKNT-VPGDV-SAMV---------P-------GGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 25 ~g~~~~~~Le~~gI~vnkn~-lP~d~-~~~~---------~-------sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
+..++.+.|.+.||.+..-. .|-.. ++.. | +.|||.... ..+++|++++.+.|.+++.
T Consensus 294 ~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~----~~t~edi~~~~~~l~~~l~ 369 (374)
T 3uwc_A 294 YRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHP----YLTEEEINYIIKKVREFYL 369 (374)
T ss_dssp THHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCT----TSCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCC----CCCHHHHHHHHHHHHHHHH
Confidence 68889999999999887532 11111 1110 1 456776433 4578999999999988774
No 143
>2q5z_A MAZG, hypothetical protein; NTP-ppase, hydrolase; 2.30A {Vibrio SP}
Probab=49.83 E-value=27 Score=23.95 Aligned_cols=15 Identities=7% Similarity=-0.095 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHhhCC
Q 032257 117 AKRCHDVEEYAKQFP 131 (144)
Q Consensus 117 ~~ir~~V~~l~~~fP 131 (144)
+.++.++..+.++||
T Consensus 99 ~al~~k~~K~~~RyP 113 (114)
T 2q5z_A 99 KTRELKEVLNKVKYN 113 (114)
T ss_dssp HHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHHHHhCC
Confidence 468889999999998
No 144
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=49.81 E-value=61 Score=24.86 Aligned_cols=65 Identities=15% Similarity=0.184 Sum_probs=42.2
Q ss_pred ceeeEeccCCCCCHHHHHHHHhh-cCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 13 HLVLVNLKNKGIDGSRVEKVLEA-VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 13 Hlvlvdl~~~gi~g~~~~~~Le~-~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
+++++.+. .+++..++.+.|.+ +||.+....-+ ...+.+||+....+ .+++|++++.+.|.+++.
T Consensus 321 ~~~~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~~-----~~~~~iRi~~~~~~---~~~~~i~~~~~~l~~~l~ 386 (393)
T 3kgw_A 321 TITTVTVP-AGYNWRDIVSYVLDHFSIEISGGLGP-----TEERVLRIGLLGYN---ATTENVDRVAEALREALQ 386 (393)
T ss_dssp SEEEEECC-TTBCHHHHHHHHHHHHCEECBCCCGG-----GTTTEEEEECCGGG---CCHHHHHHHHHHHHHHHH
T ss_pred eEEEEeCC-CCCCHHHHHHHHHHhCCEEEeCCccc-----CCCCEEEEEecccC---CCHHHHHHHHHHHHHHHH
Confidence 44556653 36678887777755 59998853321 12357999952221 256899999998888775
No 145
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=48.97 E-value=62 Score=26.71 Aligned_cols=71 Identities=8% Similarity=0.012 Sum_probs=47.7
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|++++... ..++++.. .+++..++.+.|.+.||.+.... .+..+|+.....++ ++++++++.+.|
T Consensus 398 g~~~~~~~--~~~~~~~~--~~~~~~~l~~~L~~~Gi~v~g~~--------~~~~~Ri~~~~~~~---~~e~i~~~l~~L 462 (514)
T 3mad_A 398 SLKILGDP--LWVIAVAS--DELNIYQVMEEMAGRGWRLNGLH--------RPPAFHVALTLRHT---EPGVVDRFLADL 462 (514)
T ss_dssp TCEESSCC--SSEEEEEC--SSSCHHHHHHHHHTTTCBCEEET--------TTTEEEEECCGGGG---STTHHHHHHHHH
T ss_pred CeEEeCCC--eEEEEEeC--CCCCHHHHHHHHHhcCCEeccCC--------CCCeEEEEEecCCC---CHHHHHHHHHHH
Confidence 45555322 33555544 46788899999999999884321 13579988654443 468899988888
Q ss_pred HHHHHh
Q 032257 82 DAAVKL 87 (144)
Q Consensus 82 ~~~l~~ 87 (144)
.+++..
T Consensus 463 ~~~l~~ 468 (514)
T 3mad_A 463 QDAVAQ 468 (514)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888864
No 146
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=47.94 E-value=98 Score=24.68 Aligned_cols=64 Identities=9% Similarity=0.022 Sum_probs=41.2
Q ss_pred cceeeEeccC----CCCCHHHHHH-HHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKN----KGIDGSRVEK-VLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 12 ~Hlvlvdl~~----~gi~g~~~~~-~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
...+++++.. .+.+..+..+ ++++.||.+.....++. ++.+||+. +..++++++..+.|.+++.
T Consensus 354 g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~-----~~~iRis~------~~~~e~i~~~l~~l~~~l~ 422 (427)
T 3dyd_A 354 AMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEY-----PNFIRVVI------TVPEVMMLEACSRIQEFCE 422 (427)
T ss_dssp TTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTC-----TTEEEEES------CSCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCC-----CCeEEEEE------CCCHHHHHHHHHHHHHHHH
Confidence 4466666642 1345555554 45789999875433321 35799994 2568888888888877764
No 147
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=46.25 E-value=40 Score=25.93 Aligned_cols=58 Identities=12% Similarity=0.098 Sum_probs=37.3
Q ss_pred HHHHHHHhhcCceeecccCCCCCCCCCCCceeec--chhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 27 SRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMG--TPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 27 ~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlG--T~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
..+...+. .||.||...-|...+...||-+|-| +.+++|-|-++.=.+.|-+-|...+
T Consensus 106 ~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST~G~sP~la~~iR~~ie~~l 165 (223)
T 3dfz_A 106 KFVKQHIK-NDQLVNMASSFSDGNIQIPAQFSRGRLSLAISTDGASPLLTKRIKEDLSSNY 165 (223)
T ss_dssp HHHHHHSC-TTCEEEC-----CCSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHh-CCCEEEEeCCcccCeEEEeeEEEeCCEEEEEECCCCCcHHHHHHHHHHHHHc
Confidence 34455555 8999998878877766677777776 5678899998876666666555544
No 148
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=46.11 E-value=28 Score=27.51 Aligned_cols=46 Identities=17% Similarity=0.189 Sum_probs=35.1
Q ss_pred CCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 23 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 23 gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
+++...+.+.|++.||.+.. .+||+... .+++|++++.+.|.+++.
T Consensus 364 ~~~~~~~~~~l~~~gi~v~~-------------~~Ris~~~-----~~~~~i~~~~~~l~~~~~ 409 (412)
T 1yaa_A 364 GLTPQMVKRLEETHAVYLVA-------------SGRASIAG-----LNQGNVEYVAKAIDEVVR 409 (412)
T ss_dssp CCCHHHHHHHHHHHCEECCT-------------TSEEEGGG-----CCTTTHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCEEecc-------------CcEEEEcc-----CCHhHHHHHHHHHHHHHH
Confidence 34677888889999999873 48998642 468899988888777663
No 149
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=45.27 E-value=63 Score=26.95 Aligned_cols=57 Identities=16% Similarity=-0.038 Sum_probs=39.1
Q ss_pred CCCCHHH--HHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 22 KGIDGSR--VEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 22 ~gi~g~~--~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
.|++..+ +.+.|++.||.+..-.-++.. ..+..+||+. +..++++++..+.|.+++.
T Consensus 433 ~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~--~~~~~~Ris~------~~~~e~l~~~i~~L~~~~~ 491 (498)
T 3ihj_A 433 HQMAPDMFYCMKLLEETGICVVPGSGFGQR--EGTYHFRMTI------LPPVEKLKTVLQKVKDFHI 491 (498)
T ss_dssp TTSCHHHHHHHHHHHHHCBCCEEGGGTCCC--TTCCBEEEEC------CSCHHHHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHCCEEEEeCcccCCC--CCCCEEEEEe------CCCHHHHHHHHHHHHHHHH
Confidence 3666666 588899999998753333321 1246899996 3678888888877766663
No 150
>2a3q_A Hypothetical protein; MM.29898, BC004623, 2410015N17RIK, structural genomics, PROT structure initiative, PSI; 2.32A {Mus musculus} SCOP: a.204.1.2 PDB: 2q4p_A
Probab=43.83 E-value=49 Score=24.48 Aligned_cols=18 Identities=6% Similarity=0.148 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHhhCCCCC
Q 032257 117 AKRCHDVEEYAKQFPTIG 134 (144)
Q Consensus 117 ~~ir~~V~~l~~~fPi~~ 134 (144)
+.++....+|.++||.-.
T Consensus 116 eAl~~k~~K~~~Ryp~~~ 133 (170)
T 2a3q_A 116 QAVISKMDTNRQRYPVHL 133 (170)
T ss_dssp HHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHHHHHhcccHh
Confidence 568899999999999843
No 151
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=43.69 E-value=87 Score=24.39 Aligned_cols=61 Identities=11% Similarity=0.148 Sum_probs=43.2
Q ss_pred cceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
.+++++++... .+...+.+.|.+.||.+... .++.|||..+.. .+++|+++..+.|.+++.
T Consensus 333 g~~~~~~~~~~-~~~~~~~~~l~~~Gi~v~~~---------~~~~iRi~~~~~----~t~e~i~~~l~~l~~~l~ 393 (395)
T 3nx3_A 333 GFMQGLSLDKS-VKVAKVIQKCQENALLLISC---------GENDLRFLPPLI----LQKEHIDEMSEKLRKALK 393 (395)
T ss_dssp TTEEEEEECTT-SCHHHHHHHHHHTTEECEEE---------TTTEEEECCCTT----CCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEeCCc-chHHHHHHHHHHCCCEEecC---------CCCEEEEECCCC----CCHHHHHHHHHHHHHHHH
Confidence 45778887543 36788888888999998742 135699974433 456888888888777663
No 152
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=43.66 E-value=39 Score=26.42 Aligned_cols=74 Identities=8% Similarity=0.071 Sum_probs=42.8
Q ss_pred CCeeeeCCCccceeeEeccCC--CCCH---------HHHHHHHhhcCceeecccCCCCCC--CCCCCceeecchhhhhcC
Q 032257 2 GYELVSGGTENHLVLVNLKNK--GIDG---------SRVEKVLEAVHIAANKNTVPGDVS--AMVPGGIRMGTPALTSRG 68 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~--gi~g---------~~~~~~Le~~gI~vnkn~lP~d~~--~~~~sgiRlGT~a~TtRG 68 (144)
|++++. ...+.++++++... +++. ..++++|++.||.+..-...+-.. +...+-|||+..
T Consensus 321 g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~------ 393 (410)
T 3e2y_A 321 GLKPIV-PDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFI------ 393 (410)
T ss_dssp TCEEEB-CSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECC------
T ss_pred CCeecC-CCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEc------
Confidence 455443 23456788887653 3333 556667899999987532211110 112356999832
Q ss_pred CCHHHHHHHHHHHH
Q 032257 69 FVEEDFAKVAYFFD 82 (144)
Q Consensus 69 ~~e~dm~~ia~~i~ 82 (144)
.+++++++..+.|.
T Consensus 394 ~~~e~l~~~l~~l~ 407 (410)
T 3e2y_A 394 KKDSTLDAAEEIFR 407 (410)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 27788877766653
No 153
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=43.11 E-value=18 Score=29.02 Aligned_cols=58 Identities=10% Similarity=0.057 Sum_probs=39.4
Q ss_pred eeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 14 LVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 14 lvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
.+|+++.. +..+.+.|++.||.+..-...+. .++.+||+.. ..++++++..+.|.+++
T Consensus 327 ~~~~~~~~----~~~~~~~l~~~gV~v~pg~~fg~----~~~~iRis~~------~~~e~i~~~~~~L~~~~ 384 (391)
T 3bwn_A 327 FAWLGTKE----ETDLVSELRRHKVMSRAGERCGS----DKKHVRVSML------SREDVFNVFLERLANMK 384 (391)
T ss_dssp EEEEEESS----SCCHHHHHHHTTEECEEGGGGTC----CTTEEEEESC------SCHHHHHHHHHHHHSCC
T ss_pred EEEecCCc----HHHHHHHHHHCCEEEccCCCCCC----CCCEEEEEec------CCHHHHHHHHHHHHHHH
Confidence 47788753 35788899999999875333221 2357999965 26777887777765544
No 154
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=42.53 E-value=25 Score=27.43 Aligned_cols=42 Identities=14% Similarity=0.139 Sum_probs=31.8
Q ss_pred CHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHH
Q 032257 25 DGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAA 84 (144)
Q Consensus 25 ~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~ 84 (144)
+...+.+.|++.||.+.. |+||+... .+++|+++..+.|.++
T Consensus 354 ~~~~~~~~l~~~gv~v~~-------------~~Ris~~~-----~~~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 354 TKEQVLRLREEFGVYAVA-------------SGRVNVAG-----MTPDNMAPLCEAIVAV 395 (396)
T ss_dssp CHHHHHHHHHHHCEECCT-------------TCEEEGGG-----CCTTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCeeecC-------------CceEEEee-----cCHHHHHHHHHHHHhc
Confidence 467888999999999862 58998653 3678888877776654
No 155
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=42.32 E-value=17 Score=27.68 Aligned_cols=68 Identities=10% Similarity=0.050 Sum_probs=39.1
Q ss_pred CCeeeeCCCccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
|++++. ....+++++++. ..-+++++++.||.+- +.. +..++.|||+... ..+++|++++.+.|
T Consensus 288 ~~~~~~-~~~~~~~~~~~~-----~~~~~~l~~~~gi~v~----~~~--~~~~~~iRi~~~~----~~~~~~i~~~~~~l 351 (359)
T 1svv_A 288 GIRLAW-PSASNQLFPILE-----NTMIAELNNDFDMYTV----EPL--KDGTCIMRLCTSW----ATEEKECHRFVEVL 351 (359)
T ss_dssp TCCBSS-CCSSSEECBEEE-----HHHHHHHTTTEECEEE----EEE--TTTEEEEEEECCT----TCCHHHHHHHHHHH
T ss_pred CeEEcc-CCccceEEEEcC-----HHHHHHHHHhcCEEEE----ecc--cCCCceEEEEccC----cCCHHHHHHHHHHH
Confidence 455543 234567777764 3344444444499982 111 1123569998432 24779999988887
Q ss_pred HHHH
Q 032257 82 DAAV 85 (144)
Q Consensus 82 ~~~l 85 (144)
.+++
T Consensus 352 ~~~~ 355 (359)
T 1svv_A 352 KRLV 355 (359)
T ss_dssp HHC-
T ss_pred HHHH
Confidence 7665
No 156
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=42.29 E-value=29 Score=27.65 Aligned_cols=45 Identities=20% Similarity=0.261 Sum_probs=34.4
Q ss_pred CCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 23 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 23 gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
+++...+.+.|++.||.+.. +.||+.. ++++++++++.+.|.+++
T Consensus 375 ~~~~~~~~~~l~~~gI~v~~-------------~~Ris~~-----~~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 375 GLTSAQVDRLREEFGIYAVS-------------TGRICVA-----ALNTRNLDVVANAIAAVL 419 (420)
T ss_dssp CCCHHHHHHHHHHHCEECCT-------------TSEEEGG-----GCCTTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCEEecC-------------CCeEEEe-----cCCHHHHHHHHHHHHHHh
Confidence 35788999999999998873 3498753 356788988888887765
No 157
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=48.32 E-value=5.3 Score=31.67 Aligned_cols=64 Identities=11% Similarity=0.167 Sum_probs=38.7
Q ss_pred ceeeEeccCCCCCHHHHHHHH-hhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 13 HLVLVNLKNKGIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 13 Hlvlvdl~~~gi~g~~~~~~L-e~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
.++++++...+++..++.+.| ++.||.+.....++ +..++.+||+... .++++++..+.|.+++
T Consensus 326 ~~~~i~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~---~~~~~~iRi~~~~------~~e~i~~~l~~l~~~l 390 (392)
T 3b1d_A 326 YLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYG---SEGELHARLNIAA------PKSLVEEICKRIVCCL 390 (392)
Confidence 344578765456677777777 58999987432222 1123569998432 3567766666655544
No 158
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=42.12 E-value=66 Score=25.55 Aligned_cols=59 Identities=10% Similarity=0.136 Sum_probs=42.9
Q ss_pred ceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 13 HLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 13 Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
.++++++.. +++..++.+.|.+.||.+... .+.|||..+.. .+++|++++.+.|.+++.
T Consensus 364 ~~~~~~~~~-~~~~~~l~~~l~~~Gi~v~~~----------~~~iRis~~~~----~t~e~i~~~~~~l~~~~~ 422 (429)
T 1s0a_A 364 AIGVVETTH-PVNMAALQKFFVEQGVWIRPF----------GKLIYLMPPYI----ILPQQLQRLTAAVNRAVQ 422 (429)
T ss_dssp TEEEEEESS-CBCHHHHHHHHHHTTEECCCB----------TTEEEECCCTT----CCHHHHHHHHHHHHHHTS
T ss_pred EEEEEEECC-cccHHHHHHHHHHCCCEEecc----------CCEEEEECCCC----CCHHHHHHHHHHHHHHHH
Confidence 478888754 357788888888899998631 24699985433 467999998888877663
No 159
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=41.12 E-value=43 Score=26.41 Aligned_cols=38 Identities=18% Similarity=0.181 Sum_probs=27.3
Q ss_pred eeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhh
Q 032257 14 LVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALT 65 (144)
Q Consensus 14 lvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~T 65 (144)
++++++ .+..++.+.|.+.||.+.. + ++.+||+....+
T Consensus 358 ~~~~~~----~~~~~~~~~l~~~gv~v~~----g------~~~iRis~~~~~ 395 (413)
T 3t18_A 358 FTFIPT----DKAFDIVKDLEKENIFTIP----S------AKGIRVAICGVG 395 (413)
T ss_dssp CEEEEC----SCHHHHHHHHHHTTEECEE----C------SSEEEECTTTSC
T ss_pred EEEeCC----CCHHHHHHHHHhCCEEEec----C------CCceEEEEeeCC
Confidence 455665 3788888899999999874 2 357999855433
No 160
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=40.22 E-value=40 Score=26.67 Aligned_cols=59 Identities=10% Similarity=0.018 Sum_probs=38.4
Q ss_pred CCHHHHHHHHhhcCceeeccc-CCCC-----------CCCCC------CCceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 24 IDGSRVEKVLEAVHIAANKNT-VPGD-----------VSAMV------PGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 24 i~g~~~~~~Le~~gI~vnkn~-lP~d-----------~~~~~------~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
.+..++.+.|.+.||.+.... .|.. ...+. .+.|||+... ..+++|++.+.+.|.+++
T Consensus 318 ~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~----~~t~edi~~~~~~l~~~~ 393 (399)
T 2oga_A 318 ERRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGP----HLERPQALRVIDAVREWA 393 (399)
T ss_dssp SSHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCST----TCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCC----CCCHHHHHHHHHHHHHHH
Confidence 368889999999999987421 1100 00000 1459998644 346899999999888776
Q ss_pred H
Q 032257 86 K 86 (144)
Q Consensus 86 ~ 86 (144)
.
T Consensus 394 ~ 394 (399)
T 2oga_A 394 E 394 (399)
T ss_dssp H
T ss_pred H
Confidence 4
No 161
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=39.24 E-value=43 Score=25.44 Aligned_cols=64 Identities=14% Similarity=0.241 Sum_probs=39.5
Q ss_pred ccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCC------------C---------CCCCCCCceeecchhhhhcCC
Q 032257 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPG------------D---------VSAMVPGGIRMGTPALTSRGF 69 (144)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~------------d---------~~~~~~sgiRlGT~a~TtRG~ 69 (144)
..+++.+.+. +...+.+.|++.||.+..-+..+ - .....++.|||..... .
T Consensus 244 ~~~~~~~~~~----~~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~----~ 315 (331)
T 1pff_A 244 FGSMIAFDVD----GLEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCE----N 315 (331)
T ss_dssp CCSEEEEECS----SHHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSS----C
T ss_pred CceEEEEEEC----CHHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecC----C
Confidence 3567777764 67889999999999664321111 0 0012246799987653 3
Q ss_pred CHHHHHHHHHHHH
Q 032257 70 VEEDFAKVAYFFD 82 (144)
Q Consensus 70 ~e~dm~~ia~~i~ 82 (144)
.++|++.+.+.+.
T Consensus 316 t~~~i~~l~~~l~ 328 (331)
T 1pff_A 316 VQDIIDDLKQALD 328 (331)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4677776666654
No 162
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=39.05 E-value=90 Score=24.33 Aligned_cols=65 Identities=12% Similarity=0.157 Sum_probs=40.1
Q ss_pred cceeeEeccC-CCCCHHHHHHHHhhcCceeecccCCCC-C-C-CC-C-----------------CCceeecchhhhhcCC
Q 032257 12 NHLVLVNLKN-KGIDGSRVEKVLEAVHIAANKNTVPGD-V-S-AM-V-----------------PGGIRMGTPALTSRGF 69 (144)
Q Consensus 12 ~Hlvlvdl~~-~gi~g~~~~~~Le~~gI~vnkn~lP~d-~-~-~~-~-----------------~sgiRlGT~a~TtRG~ 69 (144)
-|++.+.+.. .|++..++.+.|.+.||.+... .|+- . . +. . .+.|||.. ...+
T Consensus 303 ~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~----~~~~ 377 (390)
T 3b8x_A 303 WFGFSFIIKKDSGVIRKQLVENLNSAGIECRPI-VTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGN----HQIE 377 (390)
T ss_dssp CCEEEEEECTTSCCCHHHHHHHHHHTTBCCBCS-TTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEEC----CSSC
T ss_pred cEEEEEEecCcCcccHHHHHHHHHHCCCCeeee-cCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeC----CCCC
Confidence 3556666653 2678999999999999998741 1111 0 1 00 0 02466663 4566
Q ss_pred CHHHHHHHHHHH
Q 032257 70 VEEDFAKVAYFF 81 (144)
Q Consensus 70 ~e~dm~~ia~~i 81 (144)
+++|++.|++.|
T Consensus 378 t~~di~~i~~~l 389 (390)
T 3b8x_A 378 LFDEIDYLREVL 389 (390)
T ss_dssp CHHHHHHHHHHT
T ss_pred CHHHHHHHHHhh
Confidence 789998887754
No 163
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=37.53 E-value=41 Score=26.50 Aligned_cols=53 Identities=11% Similarity=0.014 Sum_probs=34.0
Q ss_pred HHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 30 EKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 30 ~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
.+.|.+.||.+..-.-|.-..+...+.|||+....+ +++|+.++.+.|.+++.
T Consensus 322 ~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~----t~~di~~~~~~l~~~l~ 374 (379)
T 3ke3_A 322 GSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLD----KLTDIDGTVERFEKALD 374 (379)
T ss_dssp SHHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHH----HHTCHHHHHHHHHHHHH
T ss_pred HHHHHHCCeEEeCCccccccccCcCCEEEEeCCcCC----CHHHHHHHHHHHHHHHH
Confidence 577888899886532221112233567999987655 45788877777766663
No 164
>3ol3_A Putative uncharacterized protein; tuberculosis, RV0543C, ortholog, iodide ION S phasing, structural genomics; HET: PG4 PGE; 1.95A {Mycobacterium smegmatis} PDB: 3ol4_A
Probab=36.50 E-value=66 Score=22.48 Aligned_cols=26 Identities=19% Similarity=0.204 Sum_probs=20.6
Q ss_pred eecchhhhhcCCCHHHHHHHHHHHHH
Q 032257 58 RMGTPALTSRGFVEEDFAKVAYFFDA 83 (144)
Q Consensus 58 RlGT~a~TtRG~~e~dm~~ia~~i~~ 83 (144)
++=-.|+.+|-++++|+.+||.-+.+
T Consensus 33 y~PLlALL~R~Ltddev~~Va~~L~~ 58 (107)
T 3ol3_A 33 YFALLALLKRSLTEDEVVRAAQAILR 58 (107)
T ss_dssp HHHHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred cHHHHHHhcccCCHHHHHHHHHHHHh
Confidence 34457899999999999999976543
No 165
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=36.50 E-value=39 Score=26.79 Aligned_cols=51 Identities=12% Similarity=-0.019 Sum_probs=31.2
Q ss_pred HHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 29 VEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 29 ~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
+.+.|++.||.+.. +..-+.....+||+... .-..+.+++.+++.+.+++.
T Consensus 319 ~~~ll~~~gV~v~~----g~~~~~~~~~lRi~~~~---~~~~~~~l~~l~~~l~~~l~ 369 (374)
T 2aeu_A 319 GFNLLKNYGIITIT----VAGMPGASKSLRIDLTS---RDAERIDDNYIIKAIVESIK 369 (374)
T ss_dssp HHHHHHHHCEECST----TSSSCSSCCSEEEETTS---GGGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCEEEec----CCCCCCCCCeEEEEcCC---chHHHHHHHHHHHHHHHHHH
Confidence 45778889999874 22111123469999542 33334447888888777764
No 166
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=36.06 E-value=66 Score=25.18 Aligned_cols=67 Identities=12% Similarity=0.212 Sum_probs=41.6
Q ss_pred ceeeEeccCCCCCHHHHHHHHhhcCceeeccc--CCCCCC------------CCCCCceeecchhhhhcCCCHHHHHHHH
Q 032257 13 HLVLVNLKNKGIDGSRVEKVLEAVHIAANKNT--VPGDVS------------AMVPGGIRMGTPALTSRGFVEEDFAKVA 78 (144)
Q Consensus 13 Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~--lP~d~~------------~~~~sgiRlGT~a~TtRG~~e~dm~~ia 78 (144)
+++.+.+ .+.+..++.+.|.+ |.+..-. .|.... ....+.|||+... ..+++|++++.
T Consensus 318 ~~~~~~~--~~~~~~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~----~~t~e~i~~~~ 389 (423)
T 3lvm_A 318 NILNVSF--NYVEGESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGR----FTTEEEIDYTI 389 (423)
T ss_dssp TEEEEEE--TTSCHHHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCT----TCCHHHHHHHH
T ss_pred CeEEEEe--CCCCHHHHHHHHhh--heeccCccccCCCccccHHHHHhCCCccccCceEEEECCC----CCCHHHHHHHH
Confidence 5666665 46788888888887 5544311 111000 0002579999653 35689999999
Q ss_pred HHHHHHHHh
Q 032257 79 YFFDAAVKL 87 (144)
Q Consensus 79 ~~i~~~l~~ 87 (144)
+.|.+++..
T Consensus 390 ~~l~~~~~~ 398 (423)
T 3lvm_A 390 ELVRKSIGR 398 (423)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999888864
No 167
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=35.93 E-value=58 Score=25.56 Aligned_cols=45 Identities=20% Similarity=0.225 Sum_probs=34.3
Q ss_pred CCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 24 IDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 24 i~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
++...+.+.|++.||.+.. ++||+... .+++|+++..+.+.+++.
T Consensus 365 ~~~~~~~~~l~~~gv~v~~-------------~~Ris~~~-----~~~~~i~~~~~~l~~~l~ 409 (412)
T 1ajs_A 365 LNPKQVEYLINQKHIYLLP-------------SGRINMCG-----LTTKNLDYVATSIHEAVT 409 (412)
T ss_dssp CCHHHHHHHHHTTCEECCT-------------TSEEEGGG-----CCTTTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCEEecC-------------CcEEEeee-----CCHHHHHHHHHHHHHHHH
Confidence 3477888899999999872 47998552 467889888888777663
No 168
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=35.34 E-value=56 Score=29.14 Aligned_cols=97 Identities=12% Similarity=-0.001 Sum_probs=48.2
Q ss_pred CHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHHhhhhhhhhcccchhhhHH
Q 032257 25 DGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFV 104 (144)
Q Consensus 25 ~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~~~~~~~~~~~~~~~~~~~ 104 (144)
+-.+--.++..+-|.++ +.|+--.....-.|..|+|-+|..|-.- .-.++.=|-.++.+. +.......++.
T Consensus 589 ~~~~~l~~~~~~Di~LD--t~p~~g~tT~~eal~~GvPvvt~~g~~~--~sR~~~s~l~~~gl~-----e~ia~~~~~Y~ 659 (723)
T 4gyw_A 589 PKEEHVRRGQLADVCLD--TPLCNGHTTGMDVLWAGTPMVTMPGETL--ASRVAASQLTCLGCL-----ELIAKNRQEYE 659 (723)
T ss_dssp CHHHHHHHGGGCSEEEC--CSSSCCSHHHHHHHHTTCCEEBCCCSSG--GGTHHHHHHHHHTCG-----GGBCSSHHHHH
T ss_pred CHHHHHHHhCCCeEEeC--CCCcCCHHHHHHHHHcCCCEEEccCCCc--cHhHHHHHHHHcCCc-----ccccCCHHHHH
Confidence 34444455666777777 4555321111136788888888877543 233333333333221 11122223333
Q ss_pred hhh---cccccHHHHHHHHHHHHHHHhhCCC
Q 032257 105 ATT---QSANFQSEIAKRCHDVEEYAKQFPT 132 (144)
Q Consensus 105 ~~~---~~~~~~~~~~~ir~~V~~l~~~fPi 132 (144)
+.. ..+ .+.+++||+++++-...-|+
T Consensus 660 ~~a~~la~d--~~~l~~lr~~l~~~~~~s~l 688 (723)
T 4gyw_A 660 DIAVKLGTD--LEYLKKVRGKVWKQRISSPL 688 (723)
T ss_dssp HHHHHHHHC--HHHHHHHHHHHHHHHHHSST
T ss_pred HHHHHHhcC--HHHHHHHHHHHHHHHHhCcC
Confidence 211 111 24567788888777766666
No 169
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=34.94 E-value=45 Score=25.99 Aligned_cols=42 Identities=14% Similarity=0.166 Sum_probs=31.4
Q ss_pred CHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHH
Q 032257 25 DGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAA 84 (144)
Q Consensus 25 ~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~ 84 (144)
+...+.+.|++.||.+.. |+||+.. ..+++|++++.+.|.++
T Consensus 351 ~~~~~~~~l~~~gi~v~~-------------~~Ris~~-----~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 351 TPEQVKRIKEEFGIYMVG-------------DSRINIA-----GLNDNTIPILARAIIEV 392 (394)
T ss_dssp CHHHHHHHHHHHCEECCT-------------TCEEEGG-----GCCTTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCEEecC-------------CCeEEee-----cCCHhhHHHHHHHHHHc
Confidence 457788999999999862 5899854 25678888877776553
No 170
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=34.32 E-value=49 Score=29.83 Aligned_cols=47 Identities=23% Similarity=0.139 Sum_probs=34.6
Q ss_pred CCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHH
Q 032257 23 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 82 (144)
Q Consensus 23 gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~ 82 (144)
|++|..+++.|++.||.+.+...- ....+++-|-+++++..+-+-+.
T Consensus 508 Gi~g~~~~~~L~~~~I~~E~~d~~-------------~vl~l~s~g~~~~~~~~L~~aL~ 554 (715)
T 3n75_A 508 GIPASIVAKYLDEHGIVVEKTGPY-------------NLLFLFSIGIDKTKALSLLRALT 554 (715)
T ss_dssp CCCHHHHHHHHHHTTCCCSEEETT-------------EEEEECCTTCCHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHCCCEEEecCCC-------------cEEEEeCCCCCHHHHHHHHHHHH
Confidence 789999999999999999984221 14566777877777776655443
No 171
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=34.29 E-value=48 Score=26.91 Aligned_cols=47 Identities=30% Similarity=0.298 Sum_probs=35.4
Q ss_pred CCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 23 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 23 gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
+++...+.++|++.||.+.. + + .||+.. +++++++++..+.|.+++.
T Consensus 396 ~~~~~~~~~ll~~~gV~v~~----G-------~-gRis~a-----~~~~~~i~~~~~~l~~~l~ 442 (448)
T 3meb_A 396 GLTPEHVDYLKEKWSIYLVK----A-------G-GRMSMC-----GLTESNCDYVAEAIHDAVT 442 (448)
T ss_dssp CCCHHHHHHHHHHHCEEECS----G-------G-GEEEGG-----GCCTTTHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCEEEeC----C-------C-cEEEEe-----cCCHHHHHHHHHHHHHHHH
Confidence 45678888889999999853 2 2 398753 4566889999999888875
No 172
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=31.99 E-value=54 Score=27.67 Aligned_cols=51 Identities=20% Similarity=0.220 Sum_probs=35.4
Q ss_pred HHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 27 SRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 27 ~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
..+.++|++.||.+..-..++. ..+.|||+... +.++|++++.+.|.+++.
T Consensus 473 ~~~~~ll~~~GV~v~pg~~f~~----~~~~iRls~a~-----~~~e~i~~~i~~L~~~l~ 523 (533)
T 3f6t_A 473 DFLLKLAEKNGVVLVDGVGFGA----KPGELRVSQAN-----LPTEDYALIGKQVLELLK 523 (533)
T ss_dssp HHHHHHHHHTTSSSCTTEEECS----STTEEEEESSS-----SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEeCCcccCC----CCCEEEEEEee-----CCHHHHHHHHHHHHHHHH
Confidence 5566778899998864222221 13579998533 568999999999888775
No 173
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=31.69 E-value=64 Score=24.30 Aligned_cols=45 Identities=16% Similarity=0.203 Sum_probs=34.8
Q ss_pred CHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 25 DGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 25 ~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
.+.++.+.|+++|..+.....|+..- ++.++++..+.+||.+.|+
T Consensus 201 ~~~~~~~~L~~~g~~v~~~~y~g~gH-----------------~i~~~~l~~~~~fL~k~l~ 245 (246)
T 4f21_A 201 LGHDLSDKLKVSGFANEYKHYVGMQH-----------------SVCMEEIKDISNFIAKTFK 245 (246)
T ss_dssp HHHHHHHHHHTTTCCEEEEEESSCCS-----------------SCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCCeEEEEECCCCC-----------------ccCHHHHHHHHHHHHHHhC
Confidence 47788999999999888766766431 2457899999999988774
No 174
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=30.42 E-value=76 Score=25.73 Aligned_cols=61 Identities=11% Similarity=0.180 Sum_probs=38.2
Q ss_pred cceeeEeccCCCCCHH-HHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGS-RVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~-~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
...+|+++.. +.. .++++|++.||.+..-...+. .++.+||+.. ..++++++..+.|.+++
T Consensus 361 g~f~~~~~~~---~~~~~~~~ll~~~gI~v~pg~~f~~----~~~~~Ris~~------~~~e~l~~~l~~l~~~~ 422 (427)
T 2hox_A 361 PSYAWVKCEW---EEDKDCYQTFQNGRINTQNGVGFEA----SSRYVRLSLI------KTQDDFDQLMYYLKDMV 422 (427)
T ss_dssp CSEEEEEECS---GGGCSHHHHHHHTTEECEEGGGGTS----CTTEEEEECS------SCHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCC---cHHHHHHHHHHHCCEEEcCCCccCC----CCCEEEEEec------CCHHHHHHHHHHHHHHH
Confidence 3467788864 233 455667899999874222211 2467999975 26677777777666655
No 175
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=30.32 E-value=1.3e+02 Score=24.59 Aligned_cols=61 Identities=18% Similarity=0.115 Sum_probs=38.7
Q ss_pred ceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 13 HLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 13 Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
+.+-+.+...+++ ...-..|++.||.+- ++... .+++|+|.. .-.+++|++.+.+.|.+..
T Consensus 322 ~iv~f~~~~~~~~-~~~~~~L~~~gI~~~----~g~~~---~~~iRiS~~----~~~t~edId~l~~~l~~~~ 382 (386)
T 3qm2_A 322 MNVPFQLADNTLD-KVFLEESFAAGLHAL----KGHRV---VGGMRASIY----NAMPIEGVKALTDFMIDFE 382 (386)
T ss_dssp SEEEEEESSGGGH-HHHHHHHHHTTEECC----BCCTT---TCSEEEECC----TTSCHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCcccc-HHHHHHHHHCCCEEe----CCCCC---cCeEEEEcC----CCCCHHHHHHHHHHHHHHH
Confidence 3455665543555 455555899999863 23221 257999953 3336799999888877655
No 176
>3obc_A Pyrophosphatase; dimeric four alpha-helical bundle, structural genomics, JOIN for structural genomics, JCSG; HET: MSE PGE; 1.80A {Archaeoglobus fulgidus} SCOP: a.204.1.0
Probab=29.37 E-value=69 Score=22.53 Aligned_cols=18 Identities=11% Similarity=0.263 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHhhCCCCC
Q 032257 117 AKRCHDVEEYAKQFPTIG 134 (144)
Q Consensus 117 ~~ir~~V~~l~~~fPi~~ 134 (144)
+.+.+++....++||...
T Consensus 97 ea~~~Km~Kn~~RYP~~~ 114 (118)
T 3obc_A 97 EAVKRKMEKNERKYPKNR 114 (118)
T ss_dssp HHHHHHHHHHHHHSCC--
T ss_pred HHHHHHHHHHHHhCCchh
Confidence 468889999999999854
No 177
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=28.93 E-value=1.2e+02 Score=19.71 Aligned_cols=73 Identities=7% Similarity=0.124 Sum_probs=38.6
Q ss_pred ccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCC-CCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d-~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
.-.++++|+.-.+.+|.++.+.|.+..-.+---.+.+. ........++.|....-..-+..+++ .+.|.+++.
T Consensus 49 ~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L---~~~i~~~~~ 122 (141)
T 3cu5_A 49 PPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSGYSDKEYLKAAIKFRAIRYVEKPIDPSEI---MDALKQSIQ 122 (141)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECCSTTTCCC------CCCEEECSSCCHHHH---HHHHHHHHH
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeCCCcHHHHHHHHhCCccEEEeCCCCHHHH---HHHHHHHHH
Confidence 35799999876678999888888764311111111111 12233457888877776666665544 445555554
No 178
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=28.80 E-value=1.3e+02 Score=24.15 Aligned_cols=61 Identities=20% Similarity=0.229 Sum_probs=39.2
Q ss_pred ceeeEeccC-CCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 13 HLVLVNLKN-KGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 13 Hlvlvdl~~-~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
+.+-+.+.. .+++ .+....|++.||.+-. +.. ..+++|+|..-. .+++|+..+.+.|.+..
T Consensus 296 ~ivsf~~~~~~~~~-~~~~~~L~~~gI~~~~----g~~---~~g~iRiS~~~~----~t~edId~l~~al~~~~ 357 (361)
T 3m5u_A 296 MNVSFNIAKNKDLE-PLFVKEAEEAGMIGLK----GHR---ILGGIRASIYNA----LNLDQVKTLCEFMKEFQ 357 (361)
T ss_dssp SEEEEEESSCTTHH-HHHHHHHHHTTEECCB----CCT---TTCSEEEECCTT----SCHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCchhhh-HHHHHHHHHCCCEEec----CCC---ccCeEEEEccCC----CCHHHHHHHHHHHHHHH
Confidence 455566543 3444 4566889999998642 322 126799996432 36789888888876655
No 179
>4h87_A Kanadaptin; FHA domain of PF00498, mRNA processing, nucleus, structural joint center for structural genomics, JCSG, protein structu initiative; HET: SO4; 1.55A {Homo sapiens}
Probab=28.49 E-value=33 Score=24.07 Aligned_cols=39 Identities=18% Similarity=0.191 Sum_probs=24.9
Q ss_pred ccceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCC-CCC-CCceeecch
Q 032257 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVS-AMV-PGGIRMGTP 62 (144)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~-~~~-~sgiRlGT~ 62 (144)
+...++.|+.+.+ |..||...|+.... ... -.-||||..
T Consensus 82 ~~~~~l~Dl~StN-------------GT~vNg~ri~~~~~~~L~~GD~I~~G~s 122 (130)
T 4h87_A 82 GPGFYLYDLGSTH-------------GTFLNKTRIPPRTYCRVHVGHVVRFGGS 122 (130)
T ss_dssp -CCEEEEECSCSS-------------CEEETTEECCTTCCEECCTTCEEEETTC
T ss_pred CCcceEeeCCCCC-------------ceEECCEECCCCceeECCCCCEEEECCc
Confidence 3446677776665 99999988876541 222 235999953
No 180
>1j8b_A YBAB; hypothetical protein, structural genomics, structure function project, S2F, unknown function; HET: MSE; 1.75A {Haemophilus influenzae RD} SCOP: d.222.1.1 PDB: 1pug_A
Probab=27.97 E-value=64 Score=22.33 Aligned_cols=41 Identities=15% Similarity=0.171 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhcccchhhhHHhhhcccccHHHHHHHHHHHHHHHhhCCC-CCC
Q 032257 72 EDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCHDVEEYAKQFPT-IGF 135 (144)
Q Consensus 72 ~dm~~ia~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~V~~l~~~fPi-~~~ 135 (144)
+|.+.+.++|..|+..|.. ..-+..+++...++..+++ |++
T Consensus 67 ~d~E~LedlI~aA~ndA~~-----------------------ka~~~~~e~m~~~tgGl~lppG~ 108 (112)
T 1j8b_A 67 DDKEMLEDLIAAAFNDAVR-----------------------RAEELQKEKMASVTAGMPLPPGM 108 (112)
T ss_dssp SCHHHHHHHHHHHHHHHHH-----------------------HHHHHHHHHHHHHTCC-------
T ss_pred CCHHHHHHHHHHHHHHHHH-----------------------HHHHHHHHHHHHHhCCCCCCCCC
Confidence 6888999999999865422 1223466778888887877 454
No 181
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=27.67 E-value=1e+02 Score=24.74 Aligned_cols=73 Identities=12% Similarity=0.025 Sum_probs=39.1
Q ss_pred CCeeeeCCCccceeeEeccCC--------------CCCHHHHHHHH-hhcCceeecccCCCCC-C-CCCCCceeecchhh
Q 032257 2 GYELVSGGTENHLVLVNLKNK--------------GIDGSRVEKVL-EAVHIAANKNTVPGDV-S-AMVPGGIRMGTPAL 64 (144)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~--------------gi~g~~~~~~L-e~~gI~vnkn~lP~d~-~-~~~~sgiRlGT~a~ 64 (144)
|++++. .....++++++... +.+..++.+.| ++.||.+.....-+.. . +...+.|||+..
T Consensus 351 g~~~~~-~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~-- 427 (447)
T 3b46_A 351 GLPYTA-PEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVC-- 427 (447)
T ss_dssp TCCEEC-CSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECC--
T ss_pred CCeecC-CCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEe--
Confidence 455442 22356778888643 23455565544 6799988642211110 0 111357999974
Q ss_pred hhcCCCHHHHHHHHHHH
Q 032257 65 TSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 65 TtRG~~e~dm~~ia~~i 81 (144)
.+++++++..+.|
T Consensus 428 ----~~~e~l~~~~~~l 440 (447)
T 3b46_A 428 ----KDDAYLENAVERL 440 (447)
T ss_dssp ----SCHHHHHHHHHHG
T ss_pred ----CCHHHHHHHHHHH
Confidence 2567766555543
No 182
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=27.25 E-value=67 Score=24.86 Aligned_cols=57 Identities=16% Similarity=0.143 Sum_probs=36.7
Q ss_pred CHHHHHHHHhhcCceeeccc-CCCCCCC-C---------CC-------CceeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 25 DGSRVEKVLEAVHIAANKNT-VPGDVSA-M---------VP-------GGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 25 ~g~~~~~~Le~~gI~vnkn~-lP~d~~~-~---------~~-------sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
+...+.+.|.+.||.+..-. .|....+ . .| +.|||.. ...++++|++.+++.+.+..
T Consensus 291 ~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~----~~~~t~~di~~~~~~l~~~~ 365 (373)
T 3frk_A 291 KRDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPI----WYGMKNEEIEYVIDKINAWK 365 (373)
T ss_dssp SHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECC----CTTCCHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccC----CCCCCHHHHHHHHHHHHHHh
Confidence 68899999999999987432 2221111 0 01 4577764 45667899999888765433
No 183
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=27.05 E-value=61 Score=25.63 Aligned_cols=10 Identities=20% Similarity=0.624 Sum_probs=8.3
Q ss_pred CCeeeeCCCc
Q 032257 2 GYELVSGGTE 11 (144)
Q Consensus 2 G~~vv~ggTd 11 (144)
+.+++.||||
T Consensus 26 ~a~~laGGT~ 35 (288)
T 1t3q_C 26 DARIIAGGQS 35 (288)
T ss_dssp TCEEESSCTT
T ss_pred CCEEEeCchh
Confidence 4678999998
No 184
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=26.51 E-value=71 Score=24.75 Aligned_cols=43 Identities=21% Similarity=0.339 Sum_probs=31.1
Q ss_pred CCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHH
Q 032257 24 IDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAA 84 (144)
Q Consensus 24 i~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~ 84 (144)
+++..+.+.|++.||.+.. + + ||+... ++++|++++.+.|.++
T Consensus 354 ~~~~~~~~~l~~~gi~v~~----g--------~-Ris~~~-----~~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 354 LSAAQVDRLREEFGVYLIA----S--------G-RMCVAG-----LNTANVQRVAKAFAAV 396 (397)
T ss_dssp CCHHHHHHHHHTTCEECCT----T--------C-EEEGGG-----CCTTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCEEECC----C--------C-eEEEEe-----cCHhhHHHHHHHHHhh
Confidence 4678899999999999863 1 2 887543 3457788877777654
No 185
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=25.45 E-value=1e+02 Score=25.49 Aligned_cols=50 Identities=18% Similarity=0.068 Sum_probs=34.1
Q ss_pred HHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 29 VEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 29 ~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
+.++|++.||.+..-..++.. ..++.+||... ..++++++..+.|.+++.
T Consensus 443 ~~~ll~~~gI~v~pg~~f~~~--~g~~~iRis~~------~~~e~i~~~i~~l~~~~~ 492 (500)
T 3tcm_A 443 ALRLLESTGIVVVPGSGFGQV--PGTWHFRCTIL------PQEDKIPAVISRFTVFHE 492 (500)
T ss_dssp HHHHHHHHCEECEESTTTCCC--TTCCBEEEESC------SCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHCCEEEEeCcccCCC--CCCCEEEEEEC------CCHHHHHHHHHHHHHHHH
Confidence 568899999998753333321 12356999965 566888888888777663
No 186
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=24.78 E-value=37 Score=26.42 Aligned_cols=67 Identities=13% Similarity=0.187 Sum_probs=29.3
Q ss_pred cceeeEeccCCCCCHHHHHHHHhhcCceeecccC--C------------CCCCCCCCCceeecc-hhhhhcCCCHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTV--P------------GDVSAMVPGGIRMGT-PALTSRGFVEEDFAK 76 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~l--P------------~d~~~~~~sgiRlGT-~a~TtRG~~e~dm~~ 76 (144)
.|++++.+. +.++.++.+.|. .||.+..-.. + +-......+.|||+. ...+ +++|+++
T Consensus 316 ~~~~~~~~~--~~~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~----t~e~i~~ 388 (400)
T 3vax_A 316 PHILNLSFE--DVDAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQA----TDLDVEE 388 (400)
T ss_dssp TTEEEEECT--TCCHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC-------------
T ss_pred CCEEEEEeC--CCCHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCC----CHHHHHH
Confidence 367777654 578999999999 9998763110 0 000000136799986 4333 4577887
Q ss_pred HHHHHHHHH
Q 032257 77 VAYFFDAAV 85 (144)
Q Consensus 77 ia~~i~~~l 85 (144)
+.+.|.+++
T Consensus 389 ~~~~l~~~~ 397 (400)
T 3vax_A 389 LARGVAKLK 397 (400)
T ss_dssp ---------
T ss_pred HHHHHHHHh
Confidence 777766654
No 187
>1ayg_A Cytochrome C-552; electron transport, porphyrin, ferrous iron; HET: HEC; NMR {Hydrogenobacter thermophilus} SCOP: a.3.1.1 PDB: 1ynr_A* 2ai5_A*
Probab=24.19 E-value=50 Score=20.00 Aligned_cols=17 Identities=6% Similarity=0.206 Sum_probs=14.5
Q ss_pred cCCCHHHHHHHHHHHHH
Q 032257 67 RGFVEEDFAKVAYFFDA 83 (144)
Q Consensus 67 RG~~e~dm~~ia~~i~~ 83 (144)
..++++|+..|+++|..
T Consensus 62 ~~Lsd~ei~~l~~yl~~ 78 (80)
T 1ayg_A 62 QNVTDAEAKQLAQWILS 78 (80)
T ss_dssp CCCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHh
Confidence 37999999999999753
No 188
>2q73_A MAZG, hypothetical protein; NTP-ppase, hydrolase; 1.80A {Vibrio SP} PDB: 2q9l_A
Probab=24.16 E-value=1e+02 Score=20.28 Aligned_cols=17 Identities=0% Similarity=-0.210 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHhhCCCC
Q 032257 117 AKRCHDVEEYAKQFPTI 133 (144)
Q Consensus 117 ~~ir~~V~~l~~~fPi~ 133 (144)
+.++.+...-..+||+-
T Consensus 79 ~al~~k~~~n~~kyp~~ 95 (100)
T 2q73_A 79 KTHELKEVLNKVKYNRH 95 (100)
T ss_dssp HHHHHHHHHHTC-----
T ss_pred HHHHHHHHHhcccCCCc
Confidence 56888999999999974
No 189
>2kvc_A Putative uncharacterized protein; structural genomics, seattle structural genomi for infectious disease, ssgcid, unknown function; NMR {Mycobacterium tuberculosis}
Probab=23.97 E-value=1.7e+02 Score=20.19 Aligned_cols=66 Identities=9% Similarity=0.085 Sum_probs=37.7
Q ss_pred eecchhhhhcCCCHHHHHHHHHHHHHHHHhhhhhhhhcccchhhhHHhhhcccc-cHHHHHHHHHHHHHHHhhCCCC
Q 032257 58 RMGTPALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVATTQSAN-FQSEIAKRCHDVEEYAKQFPTI 133 (144)
Q Consensus 58 RlGT~a~TtRG~~e~dm~~ia~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ir~~V~~l~~~fPi~ 133 (144)
++=..|+=+|-++++|+.+||..+.+-=. +. ...+..+...+.+.. ..++++.++++..+ .-||+-
T Consensus 28 y~PLlALL~r~Ltdeev~~Va~~L~~~~~----i~----~~dI~~~I~~vt~~~Ps~eDI~RV~arLaa--~GWPl~ 94 (103)
T 2kvc_A 28 SFAVLALLCRRLSHDEVKAVANELMRLGD----FD----QIDIGVVITHFTDELPSPEDVERVRARLAA--QGWPLD 94 (103)
T ss_dssp HHHHHHHHTTTSCHHHHHHHHHHHHHHTS----SC----SSCHHHHHHSCCSSCSCHHHHHHHHHHHGG--GCCCSS
T ss_pred hHHHHHHHhccCCHHHHHHHHHHHHHcCC----CC----HHHHHHHHHHHhccCCCHHHHHHHHHHHHh--cCCCCC
Confidence 33446777889999999999987643210 10 111223333333221 24677777776654 567774
No 190
>3pzj_A Probable acetyltransferases; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: MSE; 1.85A {Chromobacterium violaceum}
Probab=23.53 E-value=56 Score=22.96 Aligned_cols=39 Identities=15% Similarity=0.032 Sum_probs=31.1
Q ss_pred CCCCCCCCCCCceeecchhhhhcCCCHH-HHHHHHHHHHH
Q 032257 45 VPGDVSAMVPGGIRMGTPALTSRGFVEE-DFAKVAYFFDA 83 (144)
Q Consensus 45 lP~d~~~~~~sgiRlGT~a~TtRG~~e~-dm~~ia~~i~~ 83 (144)
+|.-++++.++...|-+..++.|-+.++ |...+.+++.+
T Consensus 20 ~~~~~~~~~~~~~~l~~~~l~lr~~~~~~D~~~l~~~~~~ 59 (209)
T 3pzj_A 20 LAGWRSAGKAPEAAIRGEAVSLQPLDAPRHGAALFRLFAG 59 (209)
T ss_dssp CTTCCCCCCCCSSCEECSSEEEEECCHHHHHHHHHHHHHT
T ss_pred CCCCCCccCCCCeeeECCeEEEEECCcccCHHHHHHHHcC
Confidence 4444455567778888999999999999 99999988664
No 191
>3r8n_M 30S ribosomal protein S13; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_M* 3j18_M 3oaq_M 3ofa_M 3ofx_M 3ofo_M 3r8o_M 4a2i_M 4gd1_M 4gd2_M 3i1m_M 1vs7_M* 3e1a_F 3e1c_F 1vs5_M 3i1o_M 3i1q_M 3i1s_M 3i1z_M 3i21_M ...
Probab=23.12 E-value=1.1e+02 Score=21.29 Aligned_cols=38 Identities=18% Similarity=0.245 Sum_probs=31.5
Q ss_pred CCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHH
Q 032257 22 KGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (144)
Q Consensus 22 ~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i 81 (144)
+||.-..|..+|.++||.-|+ | ..-++++|...|-++|
T Consensus 22 ~GIG~~~A~~I~~~~gid~~~---------------r-------~~~Lt~~ei~~l~~~i 59 (114)
T 3r8n_M 22 YGVGKTRSKAILAAAGIAEDV---------------K-------ISELSEGQIDTLRDEV 59 (114)
T ss_dssp TTCCHHHHHHHHHHTTCCTTC---------------C-------STTCCHHHHHHHHHHH
T ss_pred cCcCHHHHHHHHHHcCcCccc---------------C-------cccCCHHHHHHHHHHH
Confidence 599999999999999997664 3 3457889999988887
No 192
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=23.09 E-value=1e+02 Score=24.51 Aligned_cols=61 Identities=11% Similarity=0.016 Sum_probs=38.8
Q ss_pred cceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
..++++++.+.+-... +.+.|.+.||.+.... .+.|||..+. ..+++|+++..+.|.+++.
T Consensus 356 g~~~~i~~~~~~~~~~-~~~~l~~~Gv~v~~~~---------~~~lRis~~~----~~t~e~i~~~l~~l~~~l~ 416 (419)
T 2eo5_A 356 GLAWGLEYNEKKVRDR-IIGESFKRGLLLLPAG---------RSAIRVIPPL----VISEEEAKQGLDILKKVIK 416 (419)
T ss_dssp TTEEEEECSCHHHHHH-HHHHHHHTTEECEEET---------TTEEEECCCT----TCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEecCccHHH-HHHHHHHCCCEEecCC---------CCEEEEECCC----CCCHHHHHHHHHHHHHHHH
Confidence 3567788742111234 6666678899987531 3469996332 3467899888888877663
No 193
>2lky_A Uncharacterized protein; infectious disease, tuberculosis, DUF proteins, ssgcid, STRU genomics; NMR {Mycobacterium smegmatis str}
Probab=23.03 E-value=1.7e+02 Score=20.50 Aligned_cols=65 Identities=11% Similarity=0.202 Sum_probs=37.2
Q ss_pred eecchhhhhcCCCHHHHHHHHHHHHHHHHhhhhhhhhcccchhhhHHhhhcccc-cHHHHHHHHHHHHHHHhhCCC
Q 032257 58 RMGTPALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVATTQSAN-FQSEIAKRCHDVEEYAKQFPT 132 (144)
Q Consensus 58 RlGT~a~TtRG~~e~dm~~ia~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ir~~V~~l~~~fPi 132 (144)
|+=..|+=+|-++++|+.+||..+.+-= .+. ...+..+...+.+.. ..++++.++++..+ .-||+
T Consensus 30 y~PLLALL~r~Ltdeev~~Va~~L~~~~----~i~----~~dI~~~I~~vt~~~Ps~eDI~RV~arLaa--~GWPl 95 (112)
T 2lky_A 30 RVPLLALLTRRLTNDEIKAIAEDLEKRA----HFD----HIDIGVLITQMTDEMPREEDIERVRRHLAL--QGWPL 95 (112)
T ss_dssp HHHHHHHHTTTCCHHHHHHHHHHHHHHC----CCS----CCCSHHHHHHHTTCCCCHHHHHHHHHHHHT--TCCGG
T ss_pred hHHHHHHHcccCCHHHHHHHHHHHHHcC----CCC----HHHHHHHHHHHhccCCCHHHHHHHHHHHHh--cCCCC
Confidence 3345677789999999999998764321 011 111222333332221 24677777777665 56776
No 194
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=22.12 E-value=1.5e+02 Score=23.93 Aligned_cols=61 Identities=10% Similarity=0.094 Sum_probs=40.8
Q ss_pred cceeeEeccCCCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
..++++++.... ...++.+.|.+.||.+... ..+.|||..+. ..+++|+++..+.|.+++.
T Consensus 386 g~~~~~~~~~~~-~~~~~~~~l~~~Gv~v~~~---------g~~~iRi~~~~----~~t~e~i~~~l~~l~~~l~ 446 (449)
T 2cjg_A 386 GLMCAFSLPTTA-DRDELIRQLWQRAVIVLPA---------GADTVRFRPPL----TVSTAEIDAAIAAVRSALP 446 (449)
T ss_dssp TTEEEEECSSHH-HHHHHHHHHHHTTEECEEE---------TTTEEEECCCT----TCCHHHHHHHHHHHHHHHH
T ss_pred cEEEEEEECChH-HHHHHHHHHHHCCeEEecC---------CCCEEEEECCC----CCCHHHHHHHHHHHHHHHH
Confidence 457778875321 3455666676789998753 13569997433 3567999988888877763
No 195
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=22.08 E-value=1.6e+02 Score=18.74 Aligned_cols=72 Identities=13% Similarity=0.110 Sum_probs=43.1
Q ss_pred cceeeEeccCCCCCHHHHHHHHhh--cCceeecccCCCC-CCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVLEA--VHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~Le~--~gI~vnkn~lP~d-~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
-.++++|+.-.+.+|.++.+.|.+ .+-.+---.+-.. ........++.|...+-.+-+..++ +...|..++.
T Consensus 52 ~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~---l~~~i~~~~~ 126 (142)
T 3cg4_A 52 SGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIVMLTAKNAPDAKMIGLQEYVVDYITKPFDNED---LIEKTTFFMG 126 (142)
T ss_dssp CEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEEEEEECTTCCCCSSTTGGGGEEEEEESSCCHHH---HHHHHHHHHH
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCEEEEECCCCHHHHHHHHhcCccEEEeCCCCHHH---HHHHHHHHHH
Confidence 468999987667899998888877 3211111111111 1223345788888777777666554 4555555554
No 196
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=21.91 E-value=1e+02 Score=19.83 Aligned_cols=72 Identities=11% Similarity=0.158 Sum_probs=36.3
Q ss_pred cceeeEeccCCCCCHHHHHHHHhhcCc--eeecccCCCC-CCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGIDGSRVEKVLEAVHI--AANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~~~~~Le~~gI--~vnkn~lP~d-~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
-+++++|+.-.+.+|.++.+.|.+..- .+---.+-.. ........++.|....-.+-+..++ +...|..++.
T Consensus 47 ~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~---l~~~i~~~~~ 121 (140)
T 3n53_A 47 PDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSSEHKEAIVNGLHSGADDYLTKPFNRND---LLSRIEIHLR 121 (140)
T ss_dssp CSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC----CTTTTTTCCCSEEEESSCCHHH---HHHHHHHHHH
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecCCCHHHHHHHHhcCCCeeeeCCCCHHH---HHHHHHHHHh
Confidence 468999987667788888888876541 1100011111 1222335678887777777666544 4555555554
No 197
>2xzm_M RPS18E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_M
Probab=21.51 E-value=1.4e+02 Score=22.04 Aligned_cols=40 Identities=20% Similarity=0.316 Sum_probs=33.0
Q ss_pred CCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHH
Q 032257 22 KGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDA 83 (144)
Q Consensus 22 ~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~ 83 (144)
+||.-..|..+|.++||..++ |+| -++++|...|.++|..
T Consensus 36 ~GIG~~~A~~I~~~~gid~~~---------------r~~-------~Lt~~ei~~l~~~i~~ 75 (155)
T 2xzm_M 36 RGIGRRFAYIICKVLKIDPNA---------------RAG-------LLTEDQCNKITDLIAD 75 (155)
T ss_dssp TTCCHHHHHHHHHHTTCCSSS---------------CSS-------CSCHHHHHHHHHHHHS
T ss_pred cccCHHHHHHHHHHcCCCccc---------------ccc-------cCCHHHHHHHHHHHhC
Confidence 699999999999999997764 433 4679999999998865
No 198
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=21.30 E-value=1.9e+02 Score=22.77 Aligned_cols=66 Identities=14% Similarity=0.204 Sum_probs=41.2
Q ss_pred cceeeEeccCC-------CCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNK-------GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAA 84 (144)
Q Consensus 12 ~Hlvlvdl~~~-------gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~ 84 (144)
..++++++... .....++.+.|.+.||.+..... +. ..+.|||..+.. .+++|+++..+.|.++
T Consensus 358 g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-~~----~~~~lRi~~~~~----~t~~~i~~~l~~l~~~ 428 (433)
T 1zod_A 358 GLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQL-PG----MGGVFRIAPPLT----VSEDEIDLGLSLLGQA 428 (433)
T ss_dssp TTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECC-TT----SCCEEEECCCTT----CCHHHHHHHHHHHHHH
T ss_pred EEEEEEEEecCccccCCChHHHHHHHHHHHHCCCeEeccCC-CC----CCCEEEEECCcC----CCHHHHHHHHHHHHHH
Confidence 34667776431 12356677777788998875321 11 135699974432 4678898888887776
Q ss_pred HH
Q 032257 85 VK 86 (144)
Q Consensus 85 l~ 86 (144)
+.
T Consensus 429 l~ 430 (433)
T 1zod_A 429 IE 430 (433)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 199
>1r4t_A Exoenzyme S; EXOS, GAP, toxin, virulence factor, signal transduction; NMR {Pseudomonas aeruginosa}
Probab=21.16 E-value=2e+02 Score=21.21 Aligned_cols=22 Identities=18% Similarity=0.249 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHhhCCC-CCCc
Q 032257 115 EIAKRCHDVEEYAKQFPT-IGFE 136 (144)
Q Consensus 115 ~~~~ir~~V~~l~~~fPi-~~~~ 136 (144)
+++.++..|.+-...-|+ +.||
T Consensus 124 eva~l~~ave~evag~p~d~~~~ 146 (153)
T 1r4t_A 124 EVALLRQAVESEVSRVSADYPYD 146 (153)
T ss_dssp HHHHHHHHHHHHHHHTC------
T ss_pred HHHHHHHHHHHHhcCCCccCCCC
Confidence 456677888888887777 3344
No 200
>3iz6_M 40S ribosomal protein S18 (S13P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=21.10 E-value=1.3e+02 Score=22.11 Aligned_cols=40 Identities=20% Similarity=0.286 Sum_probs=32.7
Q ss_pred CCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHH
Q 032257 22 KGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDA 83 (144)
Q Consensus 22 ~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~ 83 (144)
+||.-..|..+|.++||..++ | ..-++++|...|-++|.+
T Consensus 34 ~GIG~~~A~~I~~~~gid~~~---------------r-------~g~Lt~~ei~~l~~~i~~ 73 (152)
T 3iz6_M 34 KGVGRRFSNIVCKKADIDMNK---------------R-------AGELSAEEMDRLMAVVHN 73 (152)
T ss_dssp TTCCHHHHHHHHHHHTCCSSS---------------B-------TTTSCHHHHHHHHHHHHS
T ss_pred cCcCHHHHHHHHHHcCCCCCc---------------E-------eCcCCHHHHHHHHHHHHh
Confidence 589999999999999997774 3 345788999999888753
No 201
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=20.89 E-value=1.8e+02 Score=23.14 Aligned_cols=61 Identities=5% Similarity=-0.021 Sum_probs=41.0
Q ss_pred cceeeEeccCCCC----CHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHHHHH
Q 032257 12 NHLVLVNLKNKGI----DGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (144)
Q Consensus 12 ~Hlvlvdl~~~gi----~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~~l~ 86 (144)
..++++++....- +..++.+.|.+.||.+... .+.|||..+. ..+++|++++.+.|.+++.
T Consensus 381 g~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~----------g~~iRis~~~----~~t~~~i~~~l~~l~~~l~ 445 (449)
T 3a8u_X 381 GLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFG----------GDTLQFGPTF----NSKPQDLDRLFDAVGEVLN 445 (449)
T ss_dssp TTEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEEE----------TTEEEECCCT----TCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEecCcccccccHHHHHHHHHHCCcEEecC----------CCEEEEECCC----cCCHHHHHHHHHHHHHHHH
Confidence 4678888764221 1225667777789998752 1469998543 4577999998888877764
No 202
>1pu1_A Hypothetical protein MTH677; structural genomics, alpha and beta protein (A+B), unknown function; NMR {Methanothermobacterthermautotrophicus} SCOP: d.266.1.1
Probab=20.76 E-value=68 Score=21.97 Aligned_cols=24 Identities=17% Similarity=0.409 Sum_probs=20.8
Q ss_pred hhhcCCCHHHHHHHHHHHHHHHHh
Q 032257 64 LTSRGFVEEDFAKVAYFFDAAVKL 87 (144)
Q Consensus 64 ~TtRG~~e~dm~~ia~~i~~~l~~ 87 (144)
|+.|-++++|..+|+++.++++..
T Consensus 4 ~~L~kLSe~eL~eIse~~~~~i~~ 27 (94)
T 1pu1_A 4 MSLRKLTEGDLDEISSFLHNTISD 27 (94)
T ss_dssp CCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred CCccccCHHHHHHHHHHHHHHHHH
Confidence 557888999999999999998854
No 203
>3h4q_A Putative acetyltransferase; NP_371943.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE P33; 2.50A {Staphylococcus aureus subsp}
Probab=20.65 E-value=40 Score=22.93 Aligned_cols=29 Identities=10% Similarity=-0.176 Sum_probs=20.3
Q ss_pred eeecchhhhhcCCCHHHHHHHHHHHHHHH
Q 032257 57 IRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (144)
Q Consensus 57 iRlGT~a~TtRG~~e~dm~~ia~~i~~~l 85 (144)
--.-++.+|.|-+.++|+..|.+++.++.
T Consensus 12 ~~~~~~~~~iR~~~~~D~~~i~~l~~~~~ 40 (188)
T 3h4q_A 12 HENLYFQGMIRLGKMSDLDQILNLVEEAK 40 (188)
T ss_dssp -------CCEEECCGGGHHHHHHHHHHHH
T ss_pred ccCcceeEEEEecCHhhHHHHHHHHHHHH
Confidence 34446778999999999999999988873
No 204
>2v1y_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit alpha isoform; cancer, SH2 domain, SH3 domain, transferase, oncogen mutations, HOST-virus interaction; 2.4A {Bos taurus}
Probab=20.55 E-value=57 Score=22.75 Aligned_cols=21 Identities=14% Similarity=0.284 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHhhCCCCC
Q 032257 114 SEIAKRCHDVEEYAKQFPTIG 134 (144)
Q Consensus 114 ~~~~~ir~~V~~l~~~fPi~~ 134 (144)
..+.+||++|-+-|++||+++
T Consensus 40 ~tl~eiK~~lw~eA~~~PL~~ 60 (108)
T 2v1y_A 40 ATLITIKHELFKEARKYPLHQ 60 (108)
T ss_dssp CBHHHHHHHHHHHGGGSTTGG
T ss_pred ccHHHHHHHHHHHHHhCchHH
Confidence 457899999999999999976
No 205
>3j20_O 30S ribosomal protein S13P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=20.27 E-value=1.3e+02 Score=22.07 Aligned_cols=40 Identities=15% Similarity=0.159 Sum_probs=33.2
Q ss_pred CCCCHHHHHHHHhhcCceeecccCCCCCCCCCCCceeecchhhhhcCCCHHHHHHHHHHHHH
Q 032257 22 KGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDA 83 (144)
Q Consensus 22 ~gi~g~~~~~~Le~~gI~vnkn~lP~d~~~~~~sgiRlGT~a~TtRG~~e~dm~~ia~~i~~ 83 (144)
+||.-..|..+|.++||..|+ | ..-++++|...|-++|.+
T Consensus 29 ~GIG~~~A~~I~~~~gid~~~---------------r-------~g~Lt~~ei~~i~~~i~~ 68 (148)
T 3j20_O 29 KGIGINFATMVCRVAGLDPFM---------------K-------AGYLTDEQVKKIEEILAD 68 (148)
T ss_dssp TTCCHHHHHHHHHHHTCCSSS---------------C-------TTBCCHHHHHHHHHHHHC
T ss_pred cCcCHHHHHHHHHHhCCCCCc---------------e-------eccCCHHHHHHHHHHHhc
Confidence 599999999999999997764 3 345788999999999865
No 206
>3cu4_A Cytochrome C family protein; monoheme cytochrome, electron transport; HET: HEM; 1.30A {Geobacter sulfurreducens}
Probab=20.06 E-value=59 Score=19.80 Aligned_cols=16 Identities=19% Similarity=0.110 Sum_probs=12.8
Q ss_pred CCCHHHHHHHHHHHHH
Q 032257 68 GFVEEDFAKVAYFFDA 83 (144)
Q Consensus 68 G~~e~dm~~ia~~i~~ 83 (144)
.++++|+..|+.+|..
T Consensus 67 ~ls~~ei~~l~~yi~~ 82 (85)
T 3cu4_A 67 MIPPADALKIGEYVVA 82 (85)
T ss_dssp TSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 4788999988888754
Done!