BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032259
(144 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FJP6|PUB38_ARATH U-box domain-containing protein 38 OS=Arabidopsis thaliana GN=PUB38
PE=1 SV=1
Length = 556
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 90/146 (61%), Positives = 114/146 (78%), Gaps = 13/146 (8%)
Query: 1 MVKSGESTSRVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSD-------SEATRE 53
MV+SGES SR LL++CNLA +EGRSA+LDAN V+ILVG L+E ++ S + RE
Sbjct: 398 MVRSGESASRALLVICNLACCSEGRSAMLDANAVAILVGKLREEWTEEPTEARSSSSARE 457
Query: 54 NCVAALFALGHGNLRFKGLAKEARAAEVLREVEERGSQRAKEKAKRILGMLKGR--EDDD 111
NCVAALFAL H +LRFKGLAKEARA EVL+EVEERG++RA+EKAK+IL +++ R EDD+
Sbjct: 458 NCVAALFALSHESLRFKGLAKEARAVEVLKEVEERGTERAREKAKKILQLMRERVPEDDE 517
Query: 112 ED----VDWEGVLDSGGPTRSRYRVG 133
ED +DW+ V+DS G RSR+RVG
Sbjct: 518 EDGEGSIDWDRVIDSNGSIRSRFRVG 543
>sp|Q0WUF6|PUB41_ARATH U-box domain-containing protein 41 OS=Arabidopsis thaliana GN=PUB41
PE=2 SV=1
Length = 559
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 104/152 (68%), Gaps = 8/152 (5%)
Query: 1 MVKSGESTSRVLLILCNLAASNEGRSAILDANGVSILVGMLKE-SGSDSEATRENCVAAL 59
MV+SG+STSR+LL+LCNLAA +G+ A+LD N V+ILVG L+E G DSEA RENCVA L
Sbjct: 408 MVRSGDSTSRILLVLCNLAACPDGKGAMLDGNAVAILVGKLREVGGGDSEAARENCVAVL 467
Query: 60 FALGHGNLRFKGLAKEARAAEVLREVEERGSQRAKEKAKRILGMLK-------GREDDDE 112
L GNLRF+GLA EA A EVL EVEE G++R KEKA +IL ++ ++ E
Sbjct: 468 LTLCQGNLRFRGLASEAGAEEVLMEVEENGNERVKEKASKILLAMRGGGGGESEFGENAE 527
Query: 113 DVDWEGVLDSGGPTRSRYRVGMTGYGSNSTNF 144
+W +L++ G +R++++ G G + S+ F
Sbjct: 528 AREWNRMLEATGLSRTQFQGGQNGGFAYSSQF 559
>sp|Q9FL17|PUB40_ARATH U-box domain-containing protein 40 OS=Arabidopsis thaliana GN=PUB40
PE=2 SV=2
Length = 550
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 99/150 (66%), Gaps = 6/150 (4%)
Query: 1 MVKSGESTSRVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALF 60
MV G+ RVLLILCN+A+ R A+LD+ GV +VG+L+ +E+TRE+CVA L+
Sbjct: 401 MVSLGQMIGRVLLILCNMASCPVSRPALLDSGGVECMVGVLRRDREVNESTRESCVAVLY 460
Query: 61 ALGH-GNLRFKGLAKEARAAEVLREVEERGSQRAKEKAKRILGMLKGR-EDDD----EDV 114
L H G LRFKGLA A A E L +VE G +RAK+KA+R+L +L+ + EDDD E++
Sbjct: 461 GLSHDGGLRFKGLAMAANAVEELVKVERSGRERAKQKARRVLEVLRAKIEDDDLVENEEI 520
Query: 115 DWEGVLDSGGPTRSRYRVGMTGYGSNSTNF 144
DWE +L+SG +RSR R+G NS F
Sbjct: 521 DWEELLNSGDVSRSRCRLGGEKSCVNSAEF 550
>sp|Q9STT1|PUB39_ARATH U-box domain-containing protein 39 OS=Arabidopsis thaliana GN=PUB39
PE=2 SV=1
Length = 509
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 10/137 (7%)
Query: 1 MVKSGESTSRVLLILCNLAASNEGRSAILDANGVSILVGMLKESG---SDSEATRENCVA 57
M++SGES SR+LL+LCNLAA +EG+ A+LD N VSILVG L+ESG SD+ A RENCV
Sbjct: 357 MIRSGESASRILLLLCNLAACSEGKGAMLDGNAVSILVGKLRESGGAESDA-AARENCVG 415
Query: 58 ALFALGHGNLRFKGLAKEARAAEVLREV--EERGSQRAKEKAKRILGMLKGREDD----D 111
AL L GN+RF+GLA EA A E+L E+ E GS R KEKA +IL L+G +
Sbjct: 416 ALLTLSVGNMRFRGLASEAGAEEILTEIVESESGSGRLKEKASKILQTLRGGGSEFGEGA 475
Query: 112 EDVDWEGVLDSGGPTRS 128
E +W +L++ G +RS
Sbjct: 476 EAREWNRMLEASGLSRS 492
>sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14
PE=1 SV=1
Length = 632
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 12 LLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKG 71
L IL L+ + EG++AI +A + +LV +++ + S REN A L+ L GN+
Sbjct: 531 LAILAILSTNQEGKTAIAEAESIPVLVEIIR---TGSPRNRENAAAILWYLCIGNIERLN 587
Query: 72 LAKEARAAEVLREVEERGSQRAKEKAKRILGMLKGRE 108
+A+E A L+E+ E G+ RAK KA +L +++ E
Sbjct: 588 VAREVGADVALKELTENGTDRAKRKAASLLELIQQTE 624
>sp|Q8GWV5|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3
PE=2 SV=2
Length = 760
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 6 ESTSRVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHG 65
E + + +L NL+A EGR AI+ G+ +LV + S+ +EN + L L
Sbjct: 652 EMVDKAVALLANLSAVGEGRQAIVREGGIPLLVETVDLG---SQRGKENAASVLLQLCLN 708
Query: 66 NLRFKGLAKEARAAEVLREVEERGSQRAKEKAKRILGMLKGRED 109
+ +F L + A L + + G+QRAKEKA+++L + + D
Sbjct: 709 SPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLSHFRNQRD 752
>sp|O22193|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4
PE=1 SV=3
Length = 826
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Query: 10 RVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRF 69
+ + +L NLA EGR+AI G+ +LV ++ E GS +EN AAL L + RF
Sbjct: 724 KAVAVLANLATIPEGRNAIGQEGGIPLLVEVV-ELGS--ARGKENAAAALLQLSTNSGRF 780
Query: 70 KGLAKEARAAEVLREVEERGSQRAKEKAKRILGMLKGR 107
+ + A L + + G+ RA+EKA+ +L + +
Sbjct: 781 CNMVLQEGAVPPLVALSQSGTPRAREKAQALLSYFRNQ 818
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 18 LAASN-EGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEA 76
LA N + R I ++ + +LV +L + S AT+EN V AL L + K +A +A
Sbjct: 568 LAKHNMDNRIVIGNSGAIVLLVELLYSTDS---ATQENAVTALLNLSINDNNKKAIA-DA 623
Query: 77 RAAEVLREVEERGSQRAKEKAKRILGMLKGREDDDEDVDWEGVLDSGGP 125
A E L V E GS AKE + L L E++ + G + GP
Sbjct: 624 GAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIKIGQSGAI---GP 669
>sp|Q5VRH9|PUB12_ORYSJ U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica
GN=PUB12 PE=2 SV=1
Length = 611
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Query: 4 SGESTSRVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALG 63
+G L +L LA + EG+ I + + LV ++K + S REN A L+ L
Sbjct: 501 TGGMIDEALSLLSILAGNPEGKIVIARSEPIPPLVEVIK---TGSPRNRENAAAILWLLC 557
Query: 64 HGNLRFKGLAKEARAAEVLREVEERGSQRAKEKAKRILGMLKGREDD 110
+ AK A + L+E+ E G+ RAK KA IL ++ +D
Sbjct: 558 SADTEQTLAAKAAGVEDALKELSETGTDRAKRKASSILELMHQANED 604
Score = 30.8 bits (68), Expect = 3.0, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 15 LCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFAL 62
L NL+ +++I+D++ + +V +LK + S TREN A LF+L
Sbjct: 389 LLNLSIHENNKASIVDSHAIPKIVEVLK---TGSMETRENAAATLFSL 433
>sp|Q0IMG9|SL11_ORYSJ E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica
GN=SPL11 PE=1 SV=2
Length = 694
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 3 KSGESTSRVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFAL 62
+G + IL L++ EG++AI A V +LV M+ GS + REN A + L
Sbjct: 544 PTGALMDEAMAILSILSSHPEGKAAIGAAEPVPVLVEMI---GSGTPRNRENAAAVMLHL 600
Query: 63 GHGNLRFKGLAK--EARAAEVLREVEERGSQRAKEKAKRIL 101
G LA+ E LRE+ G+ R K KA ++L
Sbjct: 601 CSGEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLL 641
>sp|A2ZLU6|SL11_ORYSI Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1
SV=2
Length = 694
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 3 KSGESTSRVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFAL 62
+G + IL L++ EG++AI A V +LV M+ GS + REN A + L
Sbjct: 544 PTGALMDEAMAILSILSSHPEGKAAIGAAEPVPVLVEMI---GSGTPRNRENAAAVMLHL 600
Query: 63 GHGNLRFKGLAK--EARAAEVLREVEERGSQRAKEKAKRIL 101
G LA+ E LRE+ G+ R K KA ++L
Sbjct: 601 CSGEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLL 641
>sp|Q8GUG9|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11
PE=2 SV=2
Length = 612
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 12 LLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKG 71
L IL LA + + +SAI+ AN + L+G+L+ +D REN A L +L +
Sbjct: 518 LTILSVLANNQDAKSAIVKANTLPALIGILQ---TDQTRNRENAAAILLSLCKRDTEKLI 574
Query: 72 LAKEARAAEVLREVEERGSQRAKEKAKRILGMLK 105
A L ++ + G++R K KA +L +L+
Sbjct: 575 TIGRLGAVVPLMDLSKNGTERGKRKAISLLELLR 608
>sp|Q5XEZ8|PUB2_ARATH U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2
PE=2 SV=1
Length = 707
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 10 RVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRF 69
+ +++L NLA EG+ AI + G+ +LV ++ E GS +EN AAL L + +F
Sbjct: 605 KAVVVLANLATVREGKIAIGEEGGIPVLVEVV-ELGSAR--GKENATAALLQLCTHSPKF 661
Query: 70 KGLAKEARAAEVLREVEERGSQRAKEKAKRILGMLKGREDDDE 112
L + + G+ R KEKA+ +L K ++
Sbjct: 662 CNNVIREGVIPPLVALTKSGTARGKEKAQNLLKYFKAHRQSNQ 704
>sp|Q9ZV31|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12
PE=2 SV=1
Length = 654
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 12 LLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKG 71
L IL L++ +G+S + A+ V +LV ++ S S +EN A L L N +
Sbjct: 543 LSILAILSSHPDGKSEVGAADAVPVLVDFIR---SGSPRNKENSAAVLVHLCSWNQQHLI 599
Query: 72 LAKEARAAEVLREVEERGSQRAKEKAKRILG 102
A++ ++L E+ E G+ R K KA ++L
Sbjct: 600 EAQKLGIMDLLIEMAENGTDRGKRKAAQLLN 630
>sp|O48700|PUB6_ARATH U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6
PE=2 SV=2
Length = 771
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 10 RVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRF 69
+ L +L NLA+S EG+ ++ G+ + + ++G E +E V+ L L G+
Sbjct: 612 KSLAVLLNLASSREGKEEMITTQGMISTLATVLDTGDTVE--QEQAVSCLVILCTGSESC 669
Query: 70 KGLAKEARAAEVLREVEERGSQRAKEKAKRILGMLKGREDDDE 112
+ + L + GS R ++K++++L + + + D+
Sbjct: 670 IQMVLQEGVIPSLVSISVNGSPRGRDKSQKLLMLFREQRHRDQ 712
>sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7
PE=2 SV=1
Length = 782
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 57/131 (43%), Gaps = 3/131 (2%)
Query: 12 LLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKG 71
L +L NLA+S EG+ + + G+ + + + G +E +E V+ L L +G
Sbjct: 615 LAVLLNLASSQEGKDEAVSSQGMISSLATVLDMGDTTE--QEQAVSCLLILCNGRESCIQ 672
Query: 72 LAKEARAAEVLREVEERGSQRAKEKAKRILGMLK-GREDDDEDVDWEGVLDSGGPTRSRY 130
+ + L + G+ R +EK++++L + + R+ D+ P R
Sbjct: 673 MVLQEGVIPSLVSISVNGTPRGREKSQKLLMLFREERQQRDQPSSNRDEPPQKEPARKSL 732
Query: 131 RVGMTGYGSNS 141
++ +GS
Sbjct: 733 SAPLSVHGSTP 743
>sp|Q5EBP3|ARMC5_MOUSE Armadillo repeat-containing protein 5 OS=Mus musculus GN=Armc5 PE=2
SV=1
Length = 926
Score = 32.0 bits (71), Expect = 1.4, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 12 LLILCNLAASNEGRSAILDANGVSILVGMLKES---GSDSEATRENCVAAL 59
+LIL NL A R A+ +A GV +L+G L+ G S AT++ V A+
Sbjct: 298 ILILANLCAQGLVRPALGNAGGVEVLLGELRRRRSPGGSSSATQQPLVRAV 348
>sp|Q6K762|PUB73_ORYSJ U-box domain-containing protein 73 OS=Oryza sativa subsp. japonica
GN=PUB73 PE=2 SV=1
Length = 586
Score = 31.6 bits (70), Expect = 1.8, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 3 KSGESTSRVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFAL 62
K S ++V I+ L+ + R +LDA G+ +L GMLK ++ + AL+A
Sbjct: 382 KRTSSLAKVASIVAVLSEFDMFRKRMLDAGGMKMLRGMLKIKDTEVITEAATAILALYAD 441
Query: 63 GHG 65
G G
Sbjct: 442 GEG 444
>sp|O80742|PUB19_ARATH U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19
PE=2 SV=1
Length = 686
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 1 MVKSGE----STSRVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCV 56
+VKS E T+ + IL +A +G ++L G+ + V +L S S AT+++CV
Sbjct: 554 LVKSEEISDGVTADSMAILAKMAEYPDGMISVLRRGGLKLAVKILG-SSEVSPATKQHCV 612
Query: 57 AALFALGH 64
A L L H
Sbjct: 613 ALLLNLCH 620
>sp|Q5PQP9|ARMC5_RAT Armadillo repeat-containing protein 5 OS=Rattus norvegicus GN=Armc5
PE=2 SV=1
Length = 926
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 12 LLILCNLAASNEGRSAILDANGVSILVGMLKE----SGSDSEA----TRENCVAALFALG 63
+LIL NL A R A+ +A GV +L+G L+ SGS S + R C+ A+
Sbjct: 298 ILILANLCAQGLVRPALGNAGGVEVLLGELRRRRGPSGSSSASQQPLVRAVCLLCREAIN 357
Query: 64 HGNLR 68
LR
Sbjct: 358 RARLR 362
>sp|Q8R7T3|SYC_THETN Cysteine--tRNA ligase OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=cysS PE=3
SV=1
Length = 467
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 15/103 (14%)
Query: 31 ANGVSILVGMLKE-----SGSDSEATRENCVAALFALGHG-NLRFKGLAKEARAAEVLRE 84
A+ +S+L M K SG+ S+ E + L L +K E E+LR
Sbjct: 365 ADAISVLFEMAKTANANLSGNSSKKLVEYILEMFLKLSDVLGLSYKNAETEIEDEEILRL 424
Query: 85 VEERGSQRAKEK----AKRILGMLKGR----EDDDEDVDWEGV 119
+EER R KEK A I LK R ED E V W+ +
Sbjct: 425 IEERQKAR-KEKNWKLADEIRDKLKERGIILEDTPEGVRWKRI 466
>sp|Q6CRH2|ASA1_KLULA ASTRA-associated protein 1 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=ASA1 PE=3 SV=1
Length = 399
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 18 LAASNEGRSAILDANGVSILVGMLKESG 45
+AAS GR+ + D NG +L +LKE G
Sbjct: 293 IAASWSGRTVVFDINGNKVLASILKERG 320
>sp|Q757R0|VAC8_ASHGO Vacuolar protein 8 OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=VAC8 PE=3 SV=3
Length = 568
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Query: 15 LCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAAL--FALGHGNLRFKGL 72
L N+ S E R ++DA V +LV +L S +D + C AL A+ N R K
Sbjct: 191 LLNMTHSGENRKELVDAGAVPVLVSLLSSSDADVQYY---CTTALSNIAVDESNRR-KLS 246
Query: 73 AKEARAAEVLREVEERGSQRAKEKA 97
E R L + + S R K +A
Sbjct: 247 QTEPRLVSKLVVLTDSPSARVKCQA 271
>sp|Q1MX18|INSC_HUMAN Protein inscuteable homolog OS=Homo sapiens GN=INSC PE=1 SV=1
Length = 579
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 2 VKSGESTSRVLLILCNLAASNEGRSAILDANGVSILVGMLKE---SGSDSEA 50
V + + +++ IL N++ + S I+ NGV +++GML E SG+ +E
Sbjct: 429 VDTPYTRDQIVTILANMSVLEQCASDIIQENGVQLIMGMLSEKPRSGTPAEV 480
>sp|Q8BXX2|ZBT49_MOUSE Zinc finger and BTB domain-containing protein 49 OS=Mus musculus
GN=Zbtb49 PE=2 SV=1
Length = 756
Score = 29.3 bits (64), Expect = 7.1, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 71 GLAKEARAAEVLREVEERGSQRAKEKAKRILGMLKGREDD 110
GLA+ +A VE GSQ A+EK + LG RE++
Sbjct: 326 GLARREESAAKEDAVERAGSQTAEEKGRGELGPESSREEE 365
>sp|Q3HNM7|INSC_MOUSE Protein inscuteable homolog OS=Mus musculus GN=Insc PE=1 SV=2
Length = 579
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 2 VKSGESTSRVLLILCNLAASNEGRSAILDANGVSILVGMLKE---SGSDSEA 50
V + + +++ IL N++ + S I+ NGV +++GML E SG+ +E
Sbjct: 429 VDTPYTRDQIVTILANMSVLEQCGSDIIQENGVQLIMGMLSEKPRSGTPAEV 480
>sp|B2IDI9|SYP_BEII9 Proline--tRNA ligase OS=Beijerinckia indica subsp. indica (strain
ATCC 9039 / DSM 1715 / NCIB 8712) GN=proS PE=3 SV=1
Length = 439
Score = 29.3 bits (64), Expect = 8.0, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 26/57 (45%)
Query: 33 GVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLREVEERG 89
GVS LVG + E+ D A F +G NL+ A +A AE+ +E G
Sbjct: 319 GVSRLVGAIIEASHDEAGIIWPEAVAPFTVGLANLKVGDAATDAACAEIYERLEALG 375
>sp|Q7TQI7|ABTB2_MOUSE Ankyrin repeat and BTB/POZ domain-containing protein 2 OS=Mus
musculus GN=Abtb2 PE=2 SV=1
Length = 1024
Score = 29.3 bits (64), Expect = 8.3, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 2 VKSGESTSRVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRE-NCVAALF 60
V SGE + + AA N ++L + G L+ ML+ +G S E NC +
Sbjct: 599 VNSGEDSYAETPLQLASAAGNYELVSLLLSRGADPLLSMLEANGMASSLHEEMNCFSHSA 658
Query: 61 ALGHGNLRFKGLAKEARAAEVLREVEE 87
A GH N+ K L + +A + +EE
Sbjct: 659 AHGHRNVLRKLLTQPQQAKADVLSLEE 685
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.131 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,163,088
Number of Sequences: 539616
Number of extensions: 2055931
Number of successful extensions: 7173
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 7053
Number of HSP's gapped (non-prelim): 143
length of query: 144
length of database: 191,569,459
effective HSP length: 106
effective length of query: 38
effective length of database: 134,370,163
effective search space: 5106066194
effective search space used: 5106066194
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)