Query 032259
Match_columns 144
No_of_seqs 112 out of 701
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 19:04:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032259.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032259hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tt9_A Plakophilin-2; cell adh 99.5 5.6E-13 1.9E-17 106.3 12.2 99 6-107 25-125 (233)
2 3nmw_A APC variant protein; AR 99.5 2.7E-13 9.3E-18 113.3 10.4 100 6-108 233-336 (354)
3 3nmz_A APC variant protein; pr 99.4 1.7E-12 6E-17 112.1 11.2 99 7-108 350-452 (458)
4 4db6_A Armadillo repeat protei 99.3 2.4E-11 8.1E-16 90.7 11.6 99 5-106 110-209 (210)
5 4db6_A Armadillo repeat protei 99.3 4.8E-11 1.6E-15 89.0 12.2 101 4-107 25-126 (210)
6 3tt9_A Plakophilin-2; cell adh 99.3 1.1E-11 3.9E-16 98.7 8.1 99 4-107 65-181 (233)
7 3l6x_A Catenin delta-1; cateni 99.3 4.6E-11 1.6E-15 106.2 12.6 100 5-107 62-164 (584)
8 3nmw_A APC variant protein; AR 99.3 2.6E-11 9.1E-16 101.2 10.4 100 5-107 185-293 (354)
9 1xm9_A Plakophilin 1; armadill 99.2 7.4E-11 2.5E-15 100.1 12.8 100 5-107 16-117 (457)
10 1xm9_A Plakophilin 1; armadill 99.2 3.4E-11 1.2E-15 102.2 10.1 98 5-107 58-173 (457)
11 4hxt_A De novo protein OR329; 99.2 2.3E-10 8E-15 86.3 12.0 101 5-108 142-243 (252)
12 4db8_A Armadillo-repeat protei 99.2 2.6E-10 8.9E-15 87.0 11.2 100 5-107 110-210 (252)
13 3nmz_A APC variant protein; pr 99.2 9.2E-11 3.1E-15 101.3 9.6 100 5-107 301-409 (458)
14 4db8_A Armadillo-repeat protei 99.2 3.7E-10 1.3E-14 86.2 11.8 101 5-108 68-169 (252)
15 4hxt_A De novo protein OR329; 99.1 5.4E-10 1.8E-14 84.3 12.1 100 5-107 58-158 (252)
16 1xqr_A HSPBP1 protein; armadil 99.1 6E-10 2E-14 91.0 12.5 102 4-107 95-197 (296)
17 3now_A UNC-45 protein, SD10334 99.0 1.3E-09 4.3E-14 100.2 12.0 100 5-108 435-567 (810)
18 3l6x_A Catenin delta-1; cateni 99.0 9.7E-10 3.3E-14 97.7 10.8 101 4-108 103-223 (584)
19 1xqr_A HSPBP1 protein; armadil 99.0 4.9E-09 1.7E-13 85.6 12.8 98 7-107 56-155 (296)
20 3ul1_B Importin subunit alpha- 99.0 4.9E-09 1.7E-13 89.8 12.8 100 6-108 116-221 (510)
21 3ul1_B Importin subunit alpha- 99.0 4.4E-09 1.5E-13 90.1 11.7 99 7-107 73-173 (510)
22 1jdh_A Beta-catenin; beta-cate 98.9 4.5E-09 1.5E-13 87.6 10.6 99 5-106 74-172 (529)
23 3tpo_A Importin subunit alpha- 98.9 1.6E-08 5.5E-13 86.6 11.7 101 5-108 307-408 (529)
24 3tpo_A Importin subunit alpha- 98.9 2.6E-08 9E-13 85.3 12.8 100 6-108 135-240 (529)
25 4b8j_A Importin subunit alpha- 98.8 3.1E-08 1.1E-12 83.7 11.6 101 5-108 132-234 (528)
26 2z6h_A Catenin beta-1, beta-ca 98.8 2.6E-08 9E-13 87.0 10.7 99 5-106 71-169 (644)
27 2z6g_A B-catenin; FULL-length, 98.8 3.1E-08 1E-12 89.4 10.7 99 5-106 207-305 (780)
28 1wa5_B Importin alpha subunit; 98.7 1.3E-07 4.3E-12 80.3 12.4 101 5-108 145-246 (530)
29 4b8j_A Importin subunit alpha- 98.7 1.9E-07 6.4E-12 78.9 12.5 101 4-107 257-359 (528)
30 1jdh_A Beta-catenin; beta-cate 98.7 1.8E-07 6.3E-12 77.9 12.0 96 6-105 434-529 (529)
31 2jdq_A Importin alpha-1 subuni 98.7 3.2E-07 1.1E-11 74.7 12.7 100 5-107 248-348 (450)
32 2z6h_A Catenin beta-1, beta-ca 98.7 2.4E-07 8.1E-12 80.9 12.6 99 6-108 431-529 (644)
33 3now_A UNC-45 protein, SD10334 98.7 1.5E-07 5E-12 86.6 11.6 101 4-107 636-738 (810)
34 2z6g_A B-catenin; FULL-length, 98.7 2.5E-07 8.4E-12 83.5 13.0 99 6-108 567-665 (780)
35 2jdq_A Importin alpha-1 subuni 98.6 5.2E-07 1.8E-11 73.4 13.2 101 5-108 79-181 (450)
36 1wa5_B Importin alpha subunit; 98.6 6.8E-07 2.3E-11 75.8 13.0 100 5-107 313-413 (530)
37 3opb_A SWI5-dependent HO expre 98.5 5.7E-07 1.9E-11 82.4 10.7 81 24-108 449-532 (778)
38 3opb_A SWI5-dependent HO expre 98.2 2.5E-06 8.7E-11 78.2 6.7 104 4-108 470-590 (778)
39 3grl_A General vesicular trans 97.3 0.0012 4E-08 59.6 10.0 98 7-107 138-242 (651)
40 4gmo_A Putative uncharacterize 97.2 0.0018 6.1E-08 57.6 10.2 83 4-88 47-130 (684)
41 4gmo_A Putative uncharacterize 97.0 0.00056 1.9E-08 60.9 4.8 104 4-107 89-215 (684)
42 3grl_A General vesicular trans 96.0 0.037 1.3E-06 49.9 9.6 102 4-108 75-197 (651)
43 3ltm_A Alpha-REP4; protein eng 95.7 0.054 1.9E-06 39.7 8.3 45 6-63 96-140 (211)
44 3ltj_A Alpharep-4; protein eng 95.6 0.059 2E-06 39.2 8.0 44 7-63 92-135 (201)
45 2fv2_A RCD1 required for cell 95.4 0.16 5.3E-06 41.3 10.4 96 8-105 73-173 (268)
46 3ltm_A Alpha-REP4; protein eng 95.2 0.14 4.8E-06 37.4 8.9 29 32-63 81-109 (211)
47 1te4_A Conserved protein MTH18 95.1 0.019 6.4E-07 39.8 3.8 58 34-105 44-101 (131)
48 3ltj_A Alpharep-4; protein eng 95.0 0.18 6.1E-06 36.5 9.1 86 6-104 60-165 (201)
49 1oyz_A Hypothetical protein YI 94.3 0.21 7E-06 38.1 8.1 62 32-105 159-220 (280)
50 1oyz_A Hypothetical protein YI 93.8 0.2 6.9E-06 38.2 7.3 64 33-105 55-119 (280)
51 2qk2_A LP04448P; mini spindles 92.8 0.65 2.2E-05 34.8 8.7 93 5-108 112-207 (242)
52 1te4_A Conserved protein MTH18 92.8 0.25 8.7E-06 33.9 5.8 68 21-102 55-129 (131)
53 2qk2_A LP04448P; mini spindles 92.5 0.3 1E-05 36.8 6.4 90 6-107 72-163 (242)
54 4fdd_A Transportin-1; heat rep 92.3 0.15 5.2E-06 45.3 5.1 99 5-108 373-473 (852)
55 2vgl_B AP-2 complex subunit be 91.0 0.83 2.8E-05 39.3 8.2 69 34-108 123-191 (591)
56 2vgl_B AP-2 complex subunit be 87.5 0.18 6.2E-06 43.5 1.4 89 7-101 137-226 (591)
57 3dad_A FH1/FH2 domain-containi 87.3 4.3 0.00015 33.8 9.6 102 4-108 173-288 (339)
58 3dad_A FH1/FH2 domain-containi 87.3 4.6 0.00016 33.6 9.8 97 9-108 136-233 (339)
59 1ibr_B P95, importin beta-1 su 87.0 0.61 2.1E-05 37.2 4.2 94 7-108 344-439 (462)
60 1b3u_A Protein (protein phosph 84.9 4.3 0.00015 33.3 8.4 67 33-106 520-587 (588)
61 1b3u_A Protein (protein phosph 84.2 2.2 7.5E-05 35.1 6.4 70 32-104 281-351 (588)
62 4fdd_A Transportin-1; heat rep 82.9 2.3 8E-05 37.6 6.4 95 6-107 336-430 (852)
63 1qgr_A Protein (importin beta 81.1 2.7 9.2E-05 36.5 6.0 97 6-107 381-480 (876)
64 1qgr_A Protein (importin beta 80.5 6 0.0002 34.3 8.0 71 33-108 367-439 (876)
65 2qk1_A Protein STU2; STU2P, XM 77.5 11 0.00038 28.8 8.0 100 5-108 118-222 (249)
66 3ldz_A STAM-1, signal transduc 75.2 10 0.00035 27.0 6.7 76 33-111 43-119 (140)
67 2qk1_A Protein STU2; STU2P, XM 72.3 5.8 0.0002 30.4 5.1 96 7-108 77-177 (249)
68 3g2s_A C-terminal fragment of 71.8 15 0.00052 26.6 7.0 78 33-113 49-133 (149)
69 1x5b_A Signal transducing adap 71.6 21 0.0007 26.1 7.8 77 33-112 53-131 (163)
70 2iw3_A Elongation factor 3A; a 70.0 19 0.00063 33.9 8.7 73 36-108 251-326 (986)
71 1ho8_A Vacuolar ATP synthase s 69.4 39 0.0014 29.2 10.1 96 9-105 186-300 (480)
72 2vgl_A Adaptor protein complex 69.0 12 0.00041 32.6 6.9 88 7-106 127-216 (621)
73 1w63_A Adapter-related protein 68.9 12 0.00039 32.4 6.8 87 6-106 122-208 (618)
74 1ibr_B P95, importin beta-1 su 68.6 8.5 0.00029 30.4 5.5 71 32-106 128-203 (462)
75 2bpt_A Importin beta-1 subunit 66.2 14 0.00049 31.8 6.8 97 6-107 384-483 (861)
76 3zyq_A Hepatocyte growth facto 64.3 24 0.00081 27.0 7.1 76 33-111 46-123 (226)
77 2bpt_A Importin beta-1 subunit 62.5 22 0.00075 30.7 7.3 69 34-107 371-441 (861)
78 1w63_A Adapter-related protein 60.6 16 0.00056 31.5 6.1 90 8-107 159-264 (618)
79 1dvp_A HRS, hepatocyte growth 59.8 32 0.0011 25.9 7.1 73 33-108 43-117 (220)
80 1juq_A ADP-ribosylation factor 58.6 29 0.00099 25.5 6.4 78 33-113 51-135 (171)
81 1mhq_A ADP-ribosylation factor 55.0 31 0.0011 24.8 5.9 78 33-113 39-123 (148)
82 3ebb_A Phospholipase A2-activa 53.8 37 0.0013 27.2 6.8 97 8-107 165-264 (304)
83 2f31_A Diaphanous protein homo 52.5 25 0.00085 26.7 5.3 57 7-66 70-127 (233)
84 1u6g_C TIP120 protein, CAND1; 51.1 16 0.00055 33.7 4.7 74 32-109 133-207 (1230)
85 4ffb_C Protein STU2; tubulin f 47.7 56 0.0019 24.7 6.7 55 7-64 71-132 (278)
86 3ebb_A Phospholipase A2-activa 47.4 88 0.003 25.0 8.1 97 6-104 206-304 (304)
87 2fv2_A RCD1 required for cell 43.8 61 0.0021 26.0 6.4 54 8-64 119-174 (268)
88 2iw3_A Elongation factor 3A; a 41.5 1.8E+02 0.0061 27.3 10.1 76 33-111 134-210 (986)
89 2vgl_A Adaptor protein complex 40.5 29 0.00098 30.2 4.4 91 7-108 164-269 (621)
90 2bnx_A Diaphanous protein homo 40.0 56 0.0019 26.9 5.9 57 7-66 74-131 (386)
91 3eg5_B Protein diaphanous homo 38.8 58 0.002 26.8 5.9 56 8-66 137-193 (383)
92 3b2a_A TON_1937, putative unch 37.8 85 0.0029 25.2 6.4 73 32-108 33-106 (265)
93 1vdy_A Hypothetical protein (R 36.4 92 0.0031 22.3 5.9 71 35-108 52-132 (140)
94 1elk_A Target of MYB1; superhe 34.8 1.2E+02 0.0042 21.6 6.7 72 33-107 54-131 (157)
95 2db0_A 253AA long hypothetical 34.0 1.7E+02 0.0057 23.0 7.3 62 33-103 182-243 (253)
96 2f31_A Diaphanous protein homo 33.9 58 0.002 24.6 4.8 78 31-108 42-127 (233)
97 4ffb_C Protein STU2; tubulin f 32.5 93 0.0032 23.4 5.8 62 47-108 151-214 (278)
98 1u6g_C TIP120 protein, CAND1; 32.3 89 0.003 28.7 6.5 69 33-108 49-117 (1230)
99 4ady_A RPN2, 26S proteasome re 27.6 2.1E+02 0.007 26.9 8.0 68 32-108 611-678 (963)
100 3tzl_A Tryptophanyl-tRNA synth 24.8 1.5E+02 0.0051 23.8 6.0 55 49-106 263-318 (322)
101 2el7_A Tryptophanyl-tRNA synth 24.6 1.4E+02 0.0046 24.2 5.7 68 36-106 255-323 (337)
102 3tjz_B Coatomer subunit gamma; 24.3 2.9E+02 0.0098 22.5 11.4 30 33-65 177-206 (355)
103 2g36_A Tryptophanyl-tRNA synth 24.0 1.8E+02 0.0062 23.5 6.4 55 49-106 279-334 (340)
104 1ho8_A Vacuolar ATP synthase s 23.8 3.5E+02 0.012 23.3 11.3 56 9-66 246-303 (480)
105 3eg5_B Protein diaphanous homo 22.6 1.9E+02 0.0064 23.7 6.2 82 26-108 104-193 (383)
No 1
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=99.46 E-value=5.6e-13 Score=106.33 Aligned_cols=99 Identities=18% Similarity=0.141 Sum_probs=90.4
Q ss_pred chHHHHHHHHHHhcC-ChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHH
Q 032259 6 ESTSRVLLILCNLAA-SNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLRE 84 (144)
Q Consensus 6 ~~~E~AlavL~~La~-~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~ 84 (144)
.+...|+..|.+|+. ++++|..|.+.|+||+||++|+++ ++..|++|+.+|.+|+.+++..+..+.+.|+||+|+.
T Consensus 25 ~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~---~~~vq~~Aa~aL~nLa~~~~~nk~~I~~~GaI~~Lv~ 101 (233)
T 3tt9_A 25 SRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQ---NEDVQRAVCGALRNLVFEDNDNKLEVAELNGVPRLLQ 101 (233)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCC---CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCC---CHHHHHHHHHHHHHHHhCCHHHHHHHHHcCCHHHHHH
Confidence 345678899999994 899999999999999999999987 8999999999999999977777888889999999999
Q ss_pred HHHh-CCHHHHHHHHHHHHHhhcC
Q 032259 85 VEER-GSQRAKEKAKRILGMLKGR 107 (144)
Q Consensus 85 Ll~~-Gt~raK~kA~~lL~~L~~~ 107 (144)
|+.. +++..++.|+.+|+.|+..
T Consensus 102 lL~~~~~~~~~e~a~~aL~nLS~~ 125 (233)
T 3tt9_A 102 VLKQTRDLETKKQITGLLWNLSSN 125 (233)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHTS
T ss_pred HHccCCCHHHHHHHHHHHHHHHcC
Confidence 9984 7999999999999999875
No 2
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=99.46 E-value=2.7e-13 Score=113.27 Aligned_cols=100 Identities=17% Similarity=0.138 Sum_probs=93.6
Q ss_pred chHHHHHHHHHHhcC----ChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHH
Q 032259 6 ESTSRVLLILCNLAA----SNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEV 81 (144)
Q Consensus 6 ~~~E~AlavL~~La~----~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~ 81 (144)
.+.++|+.+|.+|+. +++++..|.++|+||.|+++|+++ +...+++|+.+|++||.+++..+..+.+.|+||+
T Consensus 233 ~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~g~i~~Lv~lL~~~---~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~i~~ 309 (354)
T 3nmw_A 233 AIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSH---SLTIVSNACGTLWNLSARNPKDQEALWDMGAVSM 309 (354)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHTTCS---CHHHHHHHHHHHHHHTSSCHHHHHHHHHTTHHHH
T ss_pred HHHHHHHHHHHHHHhhccCCHHHHHHHHHcCCHHHHHHHHcCC---ChHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHH
Confidence 378999999999994 999999999999999999999997 8999999999999999877777888889999999
Q ss_pred HHHHHHhCCHHHHHHHHHHHHHhhcCC
Q 032259 82 LREVEERGSQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 82 L~~Ll~~Gt~raK~kA~~lL~~L~~~~ 108 (144)
|+.|+++++++.|+.|..+|..|....
T Consensus 310 Lv~LL~s~~~~i~~~A~~aL~nL~~~~ 336 (354)
T 3nmw_A 310 LKNLIHSKHKMIAMGSAAALRNLMANR 336 (354)
T ss_dssp HHTTTTCSSHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999864
No 3
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=99.39 E-value=1.7e-12 Score=112.08 Aligned_cols=99 Identities=17% Similarity=0.138 Sum_probs=93.1
Q ss_pred hHHHHHHHHHHhc----CChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHH
Q 032259 7 STSRVLLILCNLA----ASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVL 82 (144)
Q Consensus 7 ~~E~AlavL~~La----~~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L 82 (144)
+.++|+.+|.||+ .+++++..|.++|+||.||++|+++ +...+++|+.+|++||.+++..+..+.+.|+||+|
T Consensus 350 v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv~LL~~~---~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~I~~L 426 (458)
T 3nmz_A 350 IIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSH---SLTIVSNACGTLWNLSARNPKDQEALWDMGAVSML 426 (458)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHSSCS---CHHHHHHHHHHHHHHHSSCHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHhcccCCHHHHHHHHHcccHHHHHHHHcCC---ChHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHH
Confidence 7899999999999 5999999999999999999999998 79999999999999998777778888899999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHHhhcCC
Q 032259 83 REVEERGSQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 83 ~~Ll~~Gt~raK~kA~~lL~~L~~~~ 108 (144)
+.|+++++++.|+.|..+|..|....
T Consensus 427 v~LL~s~~~~v~~~Aa~AL~nL~~~~ 452 (458)
T 3nmz_A 427 KNLIHSKHKMIAMGSAAALRNLMANR 452 (458)
T ss_dssp HTTTTCSSHHHHHHHHHHHHHHHTCC
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999998864
No 4
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=99.31 E-value=2.4e-11 Score=90.71 Aligned_cols=99 Identities=26% Similarity=0.352 Sum_probs=90.5
Q ss_pred cchHHHHHHHHHHhcC-ChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHH
Q 032259 5 GESTSRVLLILCNLAA-SNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLR 83 (144)
Q Consensus 5 ~~~~E~AlavL~~La~-~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~ 83 (144)
..+.+.|+.+|.+|+. .++.+..+.+.|+||.|+++|.++ ++..+++|+.+|.+||..++..+..+.+.|+++.|+
T Consensus 110 ~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~---~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i~~L~ 186 (210)
T 4db6_A 110 EQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP---NEQILQEALWALSNIASGGNEQKQAVKEAGALEKLE 186 (210)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS---CHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHcCC---CHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHH
Confidence 4678999999999995 677788889999999999999986 799999999999999998777788888999999999
Q ss_pred HHHHhCCHHHHHHHHHHHHHhhc
Q 032259 84 EVEERGSQRAKEKAKRILGMLKG 106 (144)
Q Consensus 84 ~Ll~~Gt~raK~kA~~lL~~L~~ 106 (144)
.++.++++..|++|..+|..|..
T Consensus 187 ~ll~~~~~~v~~~a~~aL~~l~~ 209 (210)
T 4db6_A 187 QLQSHENEKIQKEAQEALEKLQS 209 (210)
T ss_dssp HGGGCSCHHHHHHHHHHHHHHCC
T ss_pred HHHhCCCHHHHHHHHHHHHHHhc
Confidence 99999999999999999999864
No 5
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=99.29 E-value=4.8e-11 Score=89.03 Aligned_cols=101 Identities=20% Similarity=0.211 Sum_probs=93.0
Q ss_pred CcchHHHHHHHHHHhc-CChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHH
Q 032259 4 SGESTSRVLLILCNLA-ASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVL 82 (144)
Q Consensus 4 ~~~~~E~AlavL~~La-~~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L 82 (144)
+..+.+.|+..|.+|+ ..++.+..+.+.|+||.|+++|..+ ++..++.|+.+|.+||.+++..+..+.+.|++|.|
T Consensus 25 ~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~---~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L 101 (210)
T 4db6_A 25 DQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSP---NEQILQEALWALSNIASGGNEQIQAVIDAGALPAL 101 (210)
T ss_dssp CHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCS---CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCC---CHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHH
Confidence 3467889999999999 5889999999999999999999986 79999999999999998887778888899999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHHhhcC
Q 032259 83 REVEERGSQRAKEKAKRILGMLKGR 107 (144)
Q Consensus 83 ~~Ll~~Gt~raK~kA~~lL~~L~~~ 107 (144)
+.++.++.+..++.|..+|..|...
T Consensus 102 ~~lL~~~~~~v~~~a~~~L~~l~~~ 126 (210)
T 4db6_A 102 VQLLSSPNEQILQEALWALSNIASG 126 (210)
T ss_dssp HHHTTCSCHHHHHHHHHHHHHHTTS
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999874
No 6
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=99.26 E-value=1.1e-11 Score=98.72 Aligned_cols=99 Identities=20% Similarity=0.176 Sum_probs=82.8
Q ss_pred CcchHHHHHHHHHHhcC-ChhhHHHHHhcCcHHHHHHHhhc-CCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHH
Q 032259 4 SGESTSRVLLILCNLAA-SNEGRSAILDANGVSILVGMLKE-SGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEV 81 (144)
Q Consensus 4 ~~~~~E~AlavL~~La~-~~egr~aI~~~g~I~~LV~lL~~-G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~ 81 (144)
+..+.+.|+.+|.||+. ++++|.+|.++|+||+||++|+. + +...+|+|+++||+|+..++... .+.+ +++|+
T Consensus 65 ~~~vq~~Aa~aL~nLa~~~~~nk~~I~~~GaI~~Lv~lL~~~~---~~~~~e~a~~aL~nLS~~~~~k~-~i~~-~~i~~ 139 (233)
T 3tt9_A 65 NEDVQRAVCGALRNLVFEDNDNKLEVAELNGVPRLLQVLKQTR---DLETKKQITGLLWNLSSNDKLKN-LMIT-EALLT 139 (233)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCC---CHHHHHHHHHHHHHHHTSGGGHH-HHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHHHhCCHHHHHHHHHcCCHHHHHHHHccCC---CHHHHHHHHHHHHHHHcChhhHH-HHHh-ccHHH
Confidence 34678999999999997 79999999999999999999985 4 78999999999999998655444 4444 46999
Q ss_pred HHHHH---HhC-------------CHHHHHHHHHHHHHhhcC
Q 032259 82 LREVE---ERG-------------SQRAKEKAKRILGMLKGR 107 (144)
Q Consensus 82 L~~Ll---~~G-------------t~raK~kA~~lL~~L~~~ 107 (144)
|+.++ .+| .+..+++|...|+.|+..
T Consensus 140 Lv~ll~~p~sG~~~~~~~~~~~~~~~~v~~na~~~L~nLss~ 181 (233)
T 3tt9_A 140 LTENIIIPFSGWPEGDYPKANGLLDFDIFYNVTGCLRNMSSA 181 (233)
T ss_dssp HCCCCCHHHHCCCGGGCCCCCTTCCHHHHHHHHHHHHHHTTS
T ss_pred HHHHHhccccCCcccccccccccchHHHHHHHHHHHHHHhcC
Confidence 99865 345 348999999999999874
No 7
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=99.26 E-value=4.6e-11 Score=106.22 Aligned_cols=100 Identities=17% Similarity=0.209 Sum_probs=91.1
Q ss_pred cchHHHHHHHHHHhcC-ChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhcc-ChHHHHHHHHcCcHHHH
Q 032259 5 GESTSRVLLILCNLAA-SNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHG-NLRFKGLAKEARAAEVL 82 (144)
Q Consensus 5 ~~~~E~AlavL~~La~-~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~-~~~~~~~a~~~Gai~~L 82 (144)
..+.+.|+..|.+|+. ++++|..|.+.|+||+||++|+++ ++..|++|+.+|.+|+.+ ++..+..+.+.|+||+|
T Consensus 62 ~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s~---~~~vq~~Aa~AL~nLa~~~~~~nk~~I~~~GaIp~L 138 (584)
T 3l6x_A 62 DAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHP---KKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPAL 138 (584)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGCS---SHHHHHHHHHHHHHHTSSSCHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCCC---CHHHHHHHHHHHHHHHccCCHHHHHHHHHcCCHHHH
Confidence 3467889999999996 899999999999999999999997 799999999999999985 57778888899999999
Q ss_pred HHHHHhC-CHHHHHHHHHHHHHhhcC
Q 032259 83 REVEERG-SQRAKEKAKRILGMLKGR 107 (144)
Q Consensus 83 ~~Ll~~G-t~raK~kA~~lL~~L~~~ 107 (144)
+.|+.++ +...++.|+.+|+.|+..
T Consensus 139 V~LL~s~~~~~~~e~aa~aL~nLS~~ 164 (584)
T 3l6x_A 139 VRLLRKARDMDLTEVITGTLWNLSSH 164 (584)
T ss_dssp HHHHHHCCSHHHHHHHHHHHHHHTTS
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHhCC
Confidence 9999985 788999999999999873
No 8
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=99.25 E-value=2.6e-11 Score=101.19 Aligned_cols=100 Identities=24% Similarity=0.209 Sum_probs=89.9
Q ss_pred cchHHHHHHHHHHhcC-ChhhHHHHH-hcCcHHHHHHHhhcCCCCCh----HHHHHHHHHHHHHhc---cChHHHHHHHH
Q 032259 5 GESTSRVLLILCNLAA-SNEGRSAIL-DANGVSILVGMLKESGSDSE----ATRENCVAALFALGH---GNLRFKGLAKE 75 (144)
Q Consensus 5 ~~~~E~AlavL~~La~-~~egr~aI~-~~g~I~~LV~lL~~G~~~S~----~~kE~Ava~L~~Lc~---~~~~~~~~a~~ 75 (144)
..+.+.|+.+|.+|+. +++++..|. ..|+||+|+++|+.+ ++ ..+++|+.+|.+||. .++..+..+.+
T Consensus 185 ~~~~~~A~~aL~nLs~~~~~nk~~i~~~~Gai~~Lv~lL~~~---~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~ 261 (354)
T 3nmw_A 185 ESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYR---SQTNTLAIIESGGGILRNVSSLIATNEDHRQILRE 261 (354)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHSTTHHHHHHHHTTCC---CSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHccChhhhHHHHHhcCcHHHHHHHhccC---CCcccHHHHHHHHHHHHHHHhhccCCHHHHHHHHH
Confidence 4678999999999999 889999998 689999999999886 33 479999999999997 56777888899
Q ss_pred cCcHHHHHHHHHhCCHHHHHHHHHHHHHhhcC
Q 032259 76 ARAAEVLREVEERGSQRAKEKAKRILGMLKGR 107 (144)
Q Consensus 76 ~Gai~~L~~Ll~~Gt~raK~kA~~lL~~L~~~ 107 (144)
.|++|+|+.++++|+...|+.|..+|..|...
T Consensus 262 ~g~i~~Lv~lL~~~~~~v~~~A~~aL~nLa~~ 293 (354)
T 3nmw_A 262 NNCLQTLLQHLKSHSLTIVSNACGTLWNLSAR 293 (354)
T ss_dssp TTHHHHHHHHTTCSCHHHHHHHHHHHHHHTSS
T ss_pred cCCHHHHHHHHcCCChHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999753
No 9
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=99.24 E-value=7.4e-11 Score=100.09 Aligned_cols=100 Identities=11% Similarity=0.124 Sum_probs=91.3
Q ss_pred cchHHHHHHHHHHhcCC-hhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHH
Q 032259 5 GESTSRVLLILCNLAAS-NEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLR 83 (144)
Q Consensus 5 ~~~~E~AlavL~~La~~-~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~ 83 (144)
..+.+.|+..|.+|+.+ ++.+..|.+.|+||.||++|+++ ++..++.|+.+|.+|+.+++..+..+.+.|+||+|+
T Consensus 16 ~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~---~~~~~~~A~~aL~nLa~~~~~~k~~i~~~G~i~~Lv 92 (457)
T 1xm9_A 16 EKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP---NQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAV 92 (457)
T ss_dssp THHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSS---CHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCC---CHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHH
Confidence 45778999999999974 55688999999999999999986 799999999999999998777888888999999999
Q ss_pred HHHH-hCCHHHHHHHHHHHHHhhcC
Q 032259 84 EVEE-RGSQRAKEKAKRILGMLKGR 107 (144)
Q Consensus 84 ~Ll~-~Gt~raK~kA~~lL~~L~~~ 107 (144)
.++. ++++..++.|..+|..|...
T Consensus 93 ~lL~~~~~~~~~~~a~~aL~nLa~~ 117 (457)
T 1xm9_A 93 SLLRRTGNAEIQKQLTGLLWNLSST 117 (457)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHTS
T ss_pred HHHhhCCCHHHHHHHHHHHHHHhcC
Confidence 9999 89999999999999999986
No 10
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=99.23 E-value=3.4e-11 Score=102.17 Aligned_cols=98 Identities=18% Similarity=0.192 Sum_probs=79.4
Q ss_pred cchHHHHHHHHHHhcCC-hhhHHHHHhcCcHHHHHHHhh-cCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHH
Q 032259 5 GESTSRVLLILCNLAAS-NEGRSAILDANGVSILVGMLK-ESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVL 82 (144)
Q Consensus 5 ~~~~E~AlavL~~La~~-~egr~aI~~~g~I~~LV~lL~-~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L 82 (144)
..+.+.|+.+|.||+.. +++|..|.++|+||+|+++|+ ++ ++..+|+|+.+|++||.++ ..+..+.+ |++|+|
T Consensus 58 ~~~~~~A~~aL~nLa~~~~~~k~~i~~~G~i~~Lv~lL~~~~---~~~~~~~a~~aL~nLa~~~-~~~~~i~~-g~i~~L 132 (457)
T 1xm9_A 58 QNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTG---NAEIQKQLTGLLWNLSSTD-ELKEELIA-DALPVL 132 (457)
T ss_dssp HHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHHHTTCC---CHHHHHHHHHHHHHHHTSS-STHHHHHH-HHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHhhCC---CHHHHHHHHHHHHHHhcCH-HhHHHHHh-ccHHHH
Confidence 35778999999999986 999999999999999999998 65 7899999999999999874 45665667 999999
Q ss_pred HHHH--------HhCCHHHHH--------HHHHHHHHhhcC
Q 032259 83 REVE--------ERGSQRAKE--------KAKRILGMLKGR 107 (144)
Q Consensus 83 ~~Ll--------~~Gt~raK~--------kA~~lL~~L~~~ 107 (144)
+.++ .+++++.|+ .|..+|..|...
T Consensus 133 v~ll~~~~s~~~~~~~~~~~e~~~~~v~~~a~~aL~nLs~~ 173 (457)
T 1xm9_A 133 ADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNLSSA 173 (457)
T ss_dssp HHHTTHHHHTCC---------CCCHHHHHHHHHHHHHHTTS
T ss_pred HHHHhccccccccCccchhcccccHHHHHHHHHHHHHHccC
Confidence 9999 334444444 999999999874
No 11
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=99.19 E-value=2.3e-10 Score=86.31 Aligned_cols=101 Identities=25% Similarity=0.341 Sum_probs=92.0
Q ss_pred cchHHHHHHHHHHhcC-ChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHH
Q 032259 5 GESTSRVLLILCNLAA-SNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLR 83 (144)
Q Consensus 5 ~~~~E~AlavL~~La~-~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~ 83 (144)
..+...|+.+|.+|+. .++.+..+.+.|++|.|+++|.+. ++..++.|+.+|.+||..++..+....+.|+++.|+
T Consensus 142 ~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~---~~~v~~~a~~~L~~l~~~~~~~~~~l~~~~~i~~L~ 218 (252)
T 4hxt_A 142 SEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTST---DSEVQKEAARALANIASGPTSAIKAIVDAGGVEVLQ 218 (252)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS---CHHHHHHHHHHHHHHTTSBHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHCcCHHHHHHHHCCC---CHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHH
Confidence 4578999999999998 566668888999999999999986 789999999999999997777788888999999999
Q ss_pred HHHHhCCHHHHHHHHHHHHHhhcCC
Q 032259 84 EVEERGSQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 84 ~Ll~~Gt~raK~kA~~lL~~L~~~~ 108 (144)
.+++++.+..|+.|..+|..|....
T Consensus 219 ~ll~~~~~~v~~~a~~~L~~l~~~~ 243 (252)
T 4hxt_A 219 KLLTSTDSEVQKEAQRALENIKSGG 243 (252)
T ss_dssp HGGGCSCHHHHHHHHHHHHHHHHTC
T ss_pred HHHCCCcHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999876
No 12
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=99.17 E-value=2.6e-10 Score=87.04 Aligned_cols=100 Identities=19% Similarity=0.222 Sum_probs=91.8
Q ss_pred cchHHHHHHHHHHhcCChhhH-HHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHH
Q 032259 5 GESTSRVLLILCNLAASNEGR-SAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLR 83 (144)
Q Consensus 5 ~~~~E~AlavL~~La~~~egr-~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~ 83 (144)
..+.+.|+.+|.+|+.+++.+ ..+.+.|+||.|+++|.++ ++..+++|+.+|.+||..++.....+.+.|++|.|+
T Consensus 110 ~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~---~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~ 186 (252)
T 4db8_A 110 EQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP---NEQILQEALWALSNIASGGNEQIQAVIDAGALPALV 186 (252)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCS---CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHhCC---CHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHH
Confidence 467899999999999999998 8889999999999999986 789999999999999997777777788899999999
Q ss_pred HHHHhCCHHHHHHHHHHHHHhhcC
Q 032259 84 EVEERGSQRAKEKAKRILGMLKGR 107 (144)
Q Consensus 84 ~Ll~~Gt~raK~kA~~lL~~L~~~ 107 (144)
.++.++.+..++.|..+|..|...
T Consensus 187 ~ll~~~~~~v~~~a~~~L~~l~~~ 210 (252)
T 4db8_A 187 QLLSSPNEQILQEALWALSNIASG 210 (252)
T ss_dssp HGGGCSSHHHHHHHHHHHHHHTTS
T ss_pred HHHCCCCHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999854
No 13
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=99.17 E-value=9.2e-11 Score=101.31 Aligned_cols=100 Identities=24% Similarity=0.209 Sum_probs=90.2
Q ss_pred cchHHHHHHHHHHhcC-ChhhHHHHH-hcCcHHHHHHHhhcCCCCCh----HHHHHHHHHHHHHhc---cChHHHHHHHH
Q 032259 5 GESTSRVLLILCNLAA-SNEGRSAIL-DANGVSILVGMLKESGSDSE----ATRENCVAALFALGH---GNLRFKGLAKE 75 (144)
Q Consensus 5 ~~~~E~AlavL~~La~-~~egr~aI~-~~g~I~~LV~lL~~G~~~S~----~~kE~Ava~L~~Lc~---~~~~~~~~a~~ 75 (144)
..+.+.|+.+|.||+. +++++..|. ..|+||+|+++|..+ ++ ..+++|+.+|++|+. +++..+..+.+
T Consensus 301 ~~v~~~A~~aL~nLs~~~~~nk~~I~~~~Gal~~Lv~LL~~~---~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~ 377 (458)
T 3nmz_A 301 ESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYR---SQTNTLAIIESGGGILRNVSSLIATNEDHRQILRE 377 (458)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHHSTTHHHHHHHHTTCC---CSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCCHHHHHHHHHhcCcHHHHHHHhcCC---CCcchHHHHHHHHHHHHHHHhcccCCHHHHHHHHH
Confidence 4678999999999999 889999998 689999999999886 33 479999999999997 67777888889
Q ss_pred cCcHHHHHHHHHhCCHHHHHHHHHHHHHhhcC
Q 032259 76 ARAAEVLREVEERGSQRAKEKAKRILGMLKGR 107 (144)
Q Consensus 76 ~Gai~~L~~Ll~~Gt~raK~kA~~lL~~L~~~ 107 (144)
.|++|+|+.++.+|+...|+.|..+|..|...
T Consensus 378 ~G~i~~Lv~LL~~~~~~v~~~A~~aL~nLa~~ 409 (458)
T 3nmz_A 378 NNCLQTLLQHLKSHSLTIVSNACGTLWNLSAR 409 (458)
T ss_dssp TTHHHHHHHHSSCSCHHHHHHHHHHHHHHHSS
T ss_pred cccHHHHHHHHcCCChHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999854
No 14
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=99.16 E-value=3.7e-10 Score=86.21 Aligned_cols=101 Identities=21% Similarity=0.224 Sum_probs=92.3
Q ss_pred cchHHHHHHHHHHhcC-ChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHH
Q 032259 5 GESTSRVLLILCNLAA-SNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLR 83 (144)
Q Consensus 5 ~~~~E~AlavL~~La~-~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~ 83 (144)
..+.+.|+.+|.+|+. +++.+..+.+.|+||.|+++|.++ ++..+++|+.+|.+||.+.+.....+.+.|++|.|+
T Consensus 68 ~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~---~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~ 144 (252)
T 4db8_A 68 EQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP---NEQILQEALWALSNIASGGNEQIQAVIDAGALPALV 144 (252)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCS---CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCC---CHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHH
Confidence 4578899999999997 899999999999999999999986 799999999999999998776557778999999999
Q ss_pred HHHHhCCHHHHHHHHHHHHHhhcCC
Q 032259 84 EVEERGSQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 84 ~Ll~~Gt~raK~kA~~lL~~L~~~~ 108 (144)
.++.++.+..++.|..+|..|....
T Consensus 145 ~lL~~~~~~v~~~a~~~L~~l~~~~ 169 (252)
T 4db8_A 145 QLLSSPNEQILQEALWALSNIASGG 169 (252)
T ss_dssp HGGGCSCHHHHHHHHHHHHHHTTSC
T ss_pred HHHhCCCHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999998753
No 15
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=99.15 E-value=5.4e-10 Score=84.30 Aligned_cols=100 Identities=24% Similarity=0.315 Sum_probs=92.6
Q ss_pred cchHHHHHHHHHHhcCC-hhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHH
Q 032259 5 GESTSRVLLILCNLAAS-NEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLR 83 (144)
Q Consensus 5 ~~~~E~AlavL~~La~~-~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~ 83 (144)
..+.+.|+.+|.+|+.+ ++.+..+.+.|+||.|+++|+++ ++..+++|+.+|.+||..++..+..+.+.|+++.|+
T Consensus 58 ~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~ll~~~---~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~ 134 (252)
T 4hxt_A 58 SEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTST---DSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLV 134 (252)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS---SHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHcCC---CHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHH
Confidence 46789999999999987 99999999999999999999986 799999999999999987777788888999999999
Q ss_pred HHHHhCCHHHHHHHHHHHHHhhcC
Q 032259 84 EVEERGSQRAKEKAKRILGMLKGR 107 (144)
Q Consensus 84 ~Ll~~Gt~raK~kA~~lL~~L~~~ 107 (144)
.++.++.+..++.|..+|..|...
T Consensus 135 ~~l~~~~~~~~~~a~~~L~~l~~~ 158 (252)
T 4hxt_A 135 KLLTSTDSEVQKEAARALANIASG 158 (252)
T ss_dssp HHTTCSCHHHHHHHHHHHHHHTTS
T ss_pred HHHcCCCHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999875
No 16
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=99.13 E-value=6e-10 Score=91.01 Aligned_cols=102 Identities=14% Similarity=0.053 Sum_probs=90.6
Q ss_pred CcchHHHHHHHHHHhcC-ChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHH
Q 032259 4 SGESTSRVLLILCNLAA-SNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVL 82 (144)
Q Consensus 4 ~~~~~E~AlavL~~La~-~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L 82 (144)
+..+.+.|+.+|.+++. +++.+..+.+.|+||+|+++|++. .++..+++|+.+|.+||.+++.........|++|.|
T Consensus 95 ~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~--~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L 172 (296)
T 1xqr_A 95 AAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRD--ACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVL 172 (296)
T ss_dssp SHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHC--SCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHH
T ss_pred CHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHccC--CCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHH
Confidence 34678999999999997 688999999999999999999864 257889999999999999877656666678999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHHhhcC
Q 032259 83 REVEERGSQRAKEKAKRILGMLKGR 107 (144)
Q Consensus 83 ~~Ll~~Gt~raK~kA~~lL~~L~~~ 107 (144)
+.+++++.+..|++|..+|..|...
T Consensus 173 ~~lL~~~d~~v~~~A~~aLs~L~~~ 197 (296)
T 1xqr_A 173 MRAMQQQVQKLKVKSAFLLQNLLVG 197 (296)
T ss_dssp HHHHHSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999998775
No 17
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=99.05 E-value=1.3e-09 Score=100.21 Aligned_cols=100 Identities=16% Similarity=0.162 Sum_probs=87.4
Q ss_pred cchHHHHHHHHHHhcCChh------------------------------hH---HHHHhcCcHHHHHHHhhcCCCCChHH
Q 032259 5 GESTSRVLLILCNLAASNE------------------------------GR---SAILDANGVSILVGMLKESGSDSEAT 51 (144)
Q Consensus 5 ~~~~E~AlavL~~La~~~e------------------------------gr---~aI~~~g~I~~LV~lL~~G~~~S~~~ 51 (144)
..+.-.|+.+|.||+...+ .+ ..|.++|+||+||.+|+++ ++..
T Consensus 435 ~~i~~~al~~L~NLt~~~d~q~~~~~l~~la~~s~~~v~~~~~ld~~~~v~~r~~~VveaGaVp~LV~LL~s~---s~~v 511 (810)
T 3now_A 435 QSCLYGVVTTFVNLCNAYEKQEMLPEMIELAKFAKQHIPEEHELDDVDFINKRITVLANEGITTALCALAKTE---SHNS 511 (810)
T ss_dssp GGGHHHHHHHHHHHTTCSCCCCCCCSCGGGTTTTCCSCCCSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTCC---CHHH
T ss_pred hHHHHHHHHHHHHHcCCchhhhhhHHHHHHHHHhhccCccccccccHHHHHHHHHHHHHCcCHHHHHHHHcCC---CHHH
Confidence 4577889999999998431 23 6788999999999999997 8999
Q ss_pred HHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHHHHhCCHHHHHHHHHHHHHhhcCC
Q 032259 52 RENCVAALFALGHGNLRFKGLAKEARAAEVLREVEERGSQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 52 kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~Ll~~Gt~raK~kA~~lL~~L~~~~ 108 (144)
||+|+.+|.+||.+ +..+..+.+.|++|+|+.|+.+|++..|+.|+.+|..|....
T Consensus 512 qe~Aa~aL~NLA~d-~~~r~~Vv~~Gaip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~~ 567 (810)
T 3now_A 512 QELIARVLNAVCGL-KELRGKVVQEGGVKALLRMALEGTEKGKRHATQALARIGITI 567 (810)
T ss_dssp HHHHHHHHHHHHTS-HHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCC-HHHHHHHHHCCCHHHHHHHHccCCHHHHHHHHHHHHHHhcCC
Confidence 99999999999964 557888889999999999999999999999999999887643
No 18
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=99.04 E-value=9.7e-10 Score=97.73 Aligned_cols=101 Identities=18% Similarity=0.167 Sum_probs=82.9
Q ss_pred CcchHHHHHHHHHHhcCC--hhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHH
Q 032259 4 SGESTSRVLLILCNLAAS--NEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEV 81 (144)
Q Consensus 4 ~~~~~E~AlavL~~La~~--~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~ 81 (144)
+..+.+.|+.+|.||+.+ +++|.+|.++|+||+||++|+++. +...+|+|+.+||+|+..++. +..+.. +++|+
T Consensus 103 ~~~vq~~Aa~AL~nLa~~~~~~nk~~I~~~GaIp~LV~LL~s~~--~~~~~e~aa~aL~nLS~~~~~-k~~I~~-~alp~ 178 (584)
T 3l6x_A 103 KKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKAR--DMDLTEVITGTLWNLSSHDSI-KMEIVD-HALHA 178 (584)
T ss_dssp SHHHHHHHHHHHHHHTSSSCHHHHHHHHHTTHHHHHHHHHHHCC--SHHHHHHHHHHHHHHTTSGGG-HHHHHH-HTHHH
T ss_pred CHHHHHHHHHHHHHHHccCCHHHHHHHHHcCCHHHHHHHHcCCC--CHHHHHHHHHHHHHHhCCchh-hHHHHh-ccHHH
Confidence 346789999999999984 999999999999999999999852 678899999999999985544 444444 57999
Q ss_pred HHHHHH---hC---------------CHHHHHHHHHHHHHhhcCC
Q 032259 82 LREVEE---RG---------------SQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 82 L~~Ll~---~G---------------t~raK~kA~~lL~~L~~~~ 108 (144)
|+.++. .| .+..+++|..+|+.|....
T Consensus 179 Lv~LL~~p~sg~~~~~~~~~k~~~~~d~~V~~nAa~~L~NLs~~~ 223 (584)
T 3l6x_A 179 LTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSER 223 (584)
T ss_dssp HHHHTHHHHHCCC----------CCCCHHHHHHHHHHHHHHTSSC
T ss_pred HHHHHhcccccccccccccccccccccHHHHHHHHHHHHHHhcCC
Confidence 999862 33 2578899999999998753
No 19
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=99.01 E-value=4.9e-09 Score=85.57 Aligned_cols=98 Identities=15% Similarity=0.174 Sum_probs=90.0
Q ss_pred hHHHHHHHHHHhcCChhhHHHHHhcCcHHHHHH-HhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHH
Q 032259 7 STSRVLLILCNLAASNEGRSAILDANGVSILVG-MLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLREV 85 (144)
Q Consensus 7 ~~E~AlavL~~La~~~egr~aI~~~g~I~~LV~-lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~L 85 (144)
-...|+..|..|+...++...|...|++|+|+. +|.++ ++.-|+.|+.+|.+++.+++..+..+.+.|++|+|+.|
T Consensus 56 ~k~~Al~~L~~lv~~~dna~~~~~~G~l~~Lv~~lL~s~---~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~L 132 (296)
T 1xqr_A 56 EREGALELLADLCENMDNAADFCQLSGMHLLVGRYLEAG---AAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRL 132 (296)
T ss_dssp HHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHTTTTCS---SHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHhChhhHHHHHHcCCHHHHHHHHHcCC---CHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHH
Confidence 456799999999999999999999999999999 99886 78999999999999999988889999999999999999
Q ss_pred HHhC-CHHHHHHHHHHHHHhhcC
Q 032259 86 EERG-SQRAKEKAKRILGMLKGR 107 (144)
Q Consensus 86 l~~G-t~raK~kA~~lL~~L~~~ 107 (144)
+.+. .+..|++|..+|..|.+.
T Consensus 133 L~~~~~~~v~~~A~~ALsnl~~~ 155 (296)
T 1xqr_A 133 LDRDACDTVRVKALFAISCLVRE 155 (296)
T ss_dssp HHHCSCHHHHHHHHHHHHHHHTT
T ss_pred HccCCCHHHHHHHHHHHHHHHcC
Confidence 9976 788999999999999765
No 20
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=98.99 E-value=4.9e-09 Score=89.77 Aligned_cols=100 Identities=17% Similarity=0.163 Sum_probs=89.2
Q ss_pred chHHHHHHHHHHhcC-ChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHH
Q 032259 6 ESTSRVLLILCNLAA-SNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLRE 84 (144)
Q Consensus 6 ~~~E~AlavL~~La~-~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~ 84 (144)
.+...|+.+|.|||. +++.+.+|+++|+||.|+++|.++ ++..+|+|+.+|++||.+++..+..+.+.|++++|+.
T Consensus 116 ~lq~~Aa~aL~nias~~~e~~~~vv~~GaIp~Lv~lL~s~---~~~v~e~A~~aL~nLa~d~~~~r~~v~~~G~i~~Ll~ 192 (510)
T 3ul1_B 116 PIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASP---HAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLA 192 (510)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCS---CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHcCC---CHHHHHHHHHHHHHHHhCCHHHHHHHHHcCChHHHHH
Confidence 467899999999986 789999999999999999999986 7999999999999999988888999999999999999
Q ss_pred HHHhC-----CHHHHHHHHHHHHHhhcCC
Q 032259 85 VEERG-----SQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 85 Ll~~G-----t~raK~kA~~lL~~L~~~~ 108 (144)
++... ....++.|...|..+....
T Consensus 193 lL~~~~~~~~~~~~~~~a~~~L~nl~~~~ 221 (510)
T 3ul1_B 193 LLAVPDLSTLACGYLRNLTWTLSNLCRNK 221 (510)
T ss_dssp HTCSSCGGGSCHHHHHHHHHHHHHHHCCC
T ss_pred HHHhccchhhhHHHHHHHHHHHHHHhhcc
Confidence 99654 3567888998888888754
No 21
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=98.97 E-value=4.4e-09 Score=90.06 Aligned_cols=99 Identities=16% Similarity=0.147 Sum_probs=84.7
Q ss_pred hHHHHHHHHHHhcCChh--hHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHH
Q 032259 7 STSRVLLILCNLAASNE--GRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLRE 84 (144)
Q Consensus 7 ~~E~AlavL~~La~~~e--gr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~ 84 (144)
..-.|+..+.+|.+.+. -..+|.++|+||.||++|... .++.-|.+|+.+|.+||.+++..+..+.+.|+||.|+.
T Consensus 73 ~q~~a~~~~rklls~e~~ppi~~ii~~G~ip~LV~lL~~~--~~~~lq~~Aa~aL~nias~~~e~~~~vv~~GaIp~Lv~ 150 (510)
T 3ul1_B 73 SQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKT--DCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFIS 150 (510)
T ss_dssp HHHHHHHHHHHHHTCSSCCCHHHHHHTTHHHHHHHHTTCT--TCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHHCCC--CCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHH
Confidence 34567777777654333 367889999999999999865 36889999999999999988888888889999999999
Q ss_pred HHHhCCHHHHHHHHHHHHHhhcC
Q 032259 85 VEERGSQRAKEKAKRILGMLKGR 107 (144)
Q Consensus 85 Ll~~Gt~raK~kA~~lL~~L~~~ 107 (144)
++.++.+..|+.|..+|..|...
T Consensus 151 lL~s~~~~v~e~A~~aL~nLa~d 173 (510)
T 3ul1_B 151 LLASPHAHISEQAVWALGNIAGD 173 (510)
T ss_dssp HTTCSCHHHHHHHHHHHHHHHTT
T ss_pred HHcCCCHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999875
No 22
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=98.94 E-value=4.5e-09 Score=87.64 Aligned_cols=99 Identities=19% Similarity=0.138 Sum_probs=89.9
Q ss_pred cchHHHHHHHHHHhcCChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHH
Q 032259 5 GESTSRVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLRE 84 (144)
Q Consensus 5 ~~~~E~AlavL~~La~~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~ 84 (144)
..+...|+..|.+|+.+++++..|.+.|+||.|+++|.++ .+..+++|+.+|.+||..++..+..+.+.|++|.|+.
T Consensus 74 ~~~~~~a~~~L~~ls~~~~~~~~i~~~g~i~~L~~lL~~~---~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ 150 (529)
T 1jdh_A 74 VETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSP---VDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVA 150 (529)
T ss_dssp HHHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHTTCS---CHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCchhHHHHHHcCCHHHHHHHHcCC---CHHHHHHHHHHHHHHhcCCcchHHHHHHcCCHHHHHH
Confidence 3577899999999999999999999999999999999986 6899999999999999976666777788999999999
Q ss_pred HHHhCCHHHHHHHHHHHHHhhc
Q 032259 85 VEERGSQRAKEKAKRILGMLKG 106 (144)
Q Consensus 85 Ll~~Gt~raK~kA~~lL~~L~~ 106 (144)
++.++++..+..+..+|..|..
T Consensus 151 ll~~~~~~~~~~~~~~L~~la~ 172 (529)
T 1jdh_A 151 LLNKTNVKFLAITTDCLQILAY 172 (529)
T ss_dssp GGGCCCHHHHHHHHHHHHHHHT
T ss_pred HHhcCCHHHHHHHHHHHHHHHh
Confidence 9999999999999989988875
No 23
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=98.87 E-value=1.6e-08 Score=86.64 Aligned_cols=101 Identities=10% Similarity=0.130 Sum_probs=91.1
Q ss_pred cchHHHHHHHHHHhcC-ChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHH
Q 032259 5 GESTSRVLLILCNLAA-SNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLR 83 (144)
Q Consensus 5 ~~~~E~AlavL~~La~-~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~ 83 (144)
..+...|+.+|.+|+. +++.+..+.+.|+++.|+.+|.+. ++..|+.|+.+|.+||.+++.....+.+.|++|+|+
T Consensus 307 ~~v~~~a~~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~~---~~~i~~~a~~aL~nl~~~~~~~~~~v~~~g~i~~Lv 383 (529)
T 3tpo_A 307 LPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNP---KTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLV 383 (529)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHTTCS---SHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHH
T ss_pred hhHHHHHHHHHHHHHccchHHHHHHhhcccHHHHHHHHcCC---CHHHHHHHHHHHHHHhcccHHHHHHHHhcCcHHHHH
Confidence 4567889999999986 677888899999999999999986 788999999999999998888788888999999999
Q ss_pred HHHHhCCHHHHHHHHHHHHHhhcCC
Q 032259 84 EVEERGSQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 84 ~Ll~~Gt~raK~kA~~lL~~L~~~~ 108 (144)
.++.++.+..|+.|+.+|..|....
T Consensus 384 ~lL~~~~~~v~~~A~~aL~nl~~~~ 408 (529)
T 3tpo_A 384 GVLSKADFKTQKAAAWAITNYTSGG 408 (529)
T ss_dssp HHHHSSCHHHHHHHHHHHHHHHHHS
T ss_pred HHhcCCCHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999887643
No 24
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=98.87 E-value=2.6e-08 Score=85.32 Aligned_cols=100 Identities=17% Similarity=0.164 Sum_probs=88.2
Q ss_pred chHHHHHHHHHHhcC-ChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHH
Q 032259 6 ESTSRVLLILCNLAA-SNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLRE 84 (144)
Q Consensus 6 ~~~E~AlavL~~La~-~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~ 84 (144)
.+...|+.+|.||+. .++.+..|+++|+||.|+.+|.++ ++..+|+|+.+|.+|+.+++..+..+...|++++|+.
T Consensus 135 ~~q~~Aa~aL~nia~~~~~~~~~vv~~Gaip~Lv~LL~s~---~~~v~e~A~~aL~nLa~~~~~~r~~i~~~g~i~~Ll~ 211 (529)
T 3tpo_A 135 PIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASP---HAHISEQAVWALGNIAGAGSAFRDLVIKHGAIDPLLA 211 (529)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCS---CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCC---CHHHHHHHHHHHHHHhccCHHHHHHHHHcCCcHHHHH
Confidence 467789999999997 677788999999999999999986 7999999999999999988889999999999999999
Q ss_pred HHHhC-----CHHHHHHHHHHHHHhhcCC
Q 032259 85 VEERG-----SQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 85 Ll~~G-----t~raK~kA~~lL~~L~~~~ 108 (144)
++... ....++.|...|..+....
T Consensus 212 lL~~~~~~~~~~~~~~~a~~~L~nl~~~~ 240 (529)
T 3tpo_A 212 LLAVPDLSTLACGYLRNLTWTLSNLCRNK 240 (529)
T ss_dssp TTCSSCGGGSCHHHHHHHHHHHHHHHCCC
T ss_pred HHhccchhHhHHHHHHHHHHHHHHHHhcc
Confidence 99754 3456888999998888754
No 25
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=98.82 E-value=3.1e-08 Score=83.68 Aligned_cols=101 Identities=22% Similarity=0.195 Sum_probs=92.0
Q ss_pred cchHHHHHHHHHHhcC-ChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHH
Q 032259 5 GESTSRVLLILCNLAA-SNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLR 83 (144)
Q Consensus 5 ~~~~E~AlavL~~La~-~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~ 83 (144)
..+.+.|+.+|.+|+. +++.+..+.+.|+||.|+++|.+. ++..+++|+.+|.+||..++..+..+...|++++|+
T Consensus 132 ~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~L~~lL~~~---~~~v~~~a~~aL~~l~~~~~~~~~~i~~~g~l~~Ll 208 (528)
T 4b8j_A 132 PQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSS---SDDVREQAVWALGNVAGDSPKCRDLVLANGALLPLL 208 (528)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCS---CHHHHHHHHHHHHHHHHTCHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHhCCcHHHHHHHhcCC---CHHHHHHHHHHHHHHhCCChhhHHHHHHCCcHHHHH
Confidence 4678899999999998 589999999999999999999986 799999999999999998787888888999999999
Q ss_pred HHH-HhCCHHHHHHHHHHHHHhhcCC
Q 032259 84 EVE-ERGSQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 84 ~Ll-~~Gt~raK~kA~~lL~~L~~~~ 108 (144)
.++ .+..+..++.|..+|..|....
T Consensus 209 ~lL~~~~~~~v~~~a~~~L~~L~~~~ 234 (528)
T 4b8j_A 209 AQLNEHTKLSMLRNATWTLSNFCRGK 234 (528)
T ss_dssp HTCCTTCCHHHHHHHHHHHHHHHCSS
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHcCC
Confidence 999 5668999999999999998864
No 26
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=98.80 E-value=2.6e-08 Score=86.97 Aligned_cols=99 Identities=19% Similarity=0.138 Sum_probs=89.3
Q ss_pred cchHHHHHHHHHHhcCChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHH
Q 032259 5 GESTSRVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLRE 84 (144)
Q Consensus 5 ~~~~E~AlavL~~La~~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~ 84 (144)
..+...|+.+|.+|+.+++++..|.+.|+||.|+++|.+. .+..+++|+.+|.+||...+..+..+.+.|++|.|+.
T Consensus 71 ~~~~~~A~~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~---~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~ 147 (644)
T 2z6h_A 71 VETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSP---VDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVA 147 (644)
T ss_dssp HHHHHHHHHHHHHHTTSHHHHHHHHTTTHHHHHHHHTTCS---SHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcChhhHHHHHHcCCHHHHHHHHhCC---CHHHHHHHHHHHHHHHhCcchhHHHHHHCCChHHHHH
Confidence 3567889999999999999999999999999999999986 6899999999999999976666777778999999999
Q ss_pred HHHhCCHHHHHHHHHHHHHhhc
Q 032259 85 VEERGSQRAKEKAKRILGMLKG 106 (144)
Q Consensus 85 Ll~~Gt~raK~kA~~lL~~L~~ 106 (144)
++.+++++.+..|..+|..|..
T Consensus 148 lL~~~~~~~~~~a~~~L~~La~ 169 (644)
T 2z6h_A 148 LLNKTNVKFLAITTDCLQILAY 169 (644)
T ss_dssp GGGCCCHHHHHHHHHHHHHHHT
T ss_pred HHCcCCHHHHHHHHHHHHHHHh
Confidence 9999999888888889988875
No 27
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=98.78 E-value=3.1e-08 Score=89.40 Aligned_cols=99 Identities=19% Similarity=0.149 Sum_probs=90.3
Q ss_pred cchHHHHHHHHHHhcCChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHH
Q 032259 5 GESTSRVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLRE 84 (144)
Q Consensus 5 ~~~~E~AlavL~~La~~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~ 84 (144)
..+...|+.+|.+|+.+++++..|.+.|+||.|+++|+++ ++..++.|+.+|.+||...+..+..+.+.|+++.|+.
T Consensus 207 ~~vr~~Aa~aL~~Ls~~~~~~~~i~~~g~I~~Lv~lL~~~---~~~v~~~A~~aL~nLa~~~~~~~~~v~~~g~v~~Lv~ 283 (780)
T 2z6g_A 207 VETARCTSGTLHNLSHHREGLLAIFKSGGIPALVNMLGSP---VDSVLFHAITTLHNLLLHQEGAKMAVRLAGGLQKMVA 283 (780)
T ss_dssp HHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHTTCS---CHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCchhHHHHHHcCCHHHHHHHHcCC---CHHHHHHHHHHHHHHhCCChhhHHHHHHcCCHHHHHH
Confidence 3567899999999999999999999999999999999987 7999999999999999976667788889999999999
Q ss_pred HHHhCCHHHHHHHHHHHHHhhc
Q 032259 85 VEERGSQRAKEKAKRILGMLKG 106 (144)
Q Consensus 85 Ll~~Gt~raK~kA~~lL~~L~~ 106 (144)
++.+..+..++.|..+|+.|..
T Consensus 284 lL~~~~~~v~~~a~~aL~~La~ 305 (780)
T 2z6g_A 284 LLNKTNVKFLAITTDCLQILAY 305 (780)
T ss_dssp GGGCCCHHHHHHHHHHHHHHHT
T ss_pred HHhcCCHHHHHHHHHHHHHHhc
Confidence 9999999999999999988875
No 28
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=98.73 E-value=1.3e-07 Score=80.26 Aligned_cols=101 Identities=16% Similarity=0.184 Sum_probs=91.9
Q ss_pred cchHHHHHHHHHHhcC-ChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHH
Q 032259 5 GESTSRVLLILCNLAA-SNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLR 83 (144)
Q Consensus 5 ~~~~E~AlavL~~La~-~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~ 83 (144)
..+.+.|+.+|.+|+. .++.+..+.+.|+||.|+++|.+. ++..++.|+.+|.+||..++..+..+...|+++.|+
T Consensus 145 ~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~---~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~ 221 (530)
T 1wa5_B 145 EMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTG---SVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPIL 221 (530)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHC---CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHcCC---CHHHHHHHHHHHHHHhCCCccchHHHHHcCcHHHHH
Confidence 3578899999999997 578899999999999999999986 799999999999999998777788888899999999
Q ss_pred HHHHhCCHHHHHHHHHHHHHhhcCC
Q 032259 84 EVEERGSQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 84 ~Ll~~Gt~raK~kA~~lL~~L~~~~ 108 (144)
.++.+..+..++.|..+|..|....
T Consensus 222 ~ll~~~~~~v~~~a~~~L~~L~~~~ 246 (530)
T 1wa5_B 222 GLFNSNKPSLIRTATWTLSNLCRGK 246 (530)
T ss_dssp HGGGSCCHHHHHHHHHHHHHHHCCS
T ss_pred HHhccCCHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999998764
No 29
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=98.70 E-value=1.9e-07 Score=78.91 Aligned_cols=101 Identities=14% Similarity=0.125 Sum_probs=89.6
Q ss_pred CcchHHHHHHHHHHhcCChhhH-HHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHH
Q 032259 4 SGESTSRVLLILCNLAASNEGR-SAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVL 82 (144)
Q Consensus 4 ~~~~~E~AlavL~~La~~~egr-~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L 82 (144)
+..+.+.|+.+|.+|+..++.+ ..+.+.|+||.|+++|... ++..++.|+.+|.+||.+++.....+.+.|++|.|
T Consensus 257 ~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~v~~Lv~lL~~~---~~~v~~~a~~~L~nl~~~~~~~~~~~~~~~~l~~L 333 (528)
T 4b8j_A 257 DEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHP---SPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCL 333 (528)
T ss_dssp CHHHHHHHHHHHHHHTSSCHHHHHHHHHTTCHHHHHHHTTCS---CHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCHHHHHHHHHcCHHHHHHHHHcCC---ChhHHHHHHHHHHHHHcCCHHHHHHHHHhhhHHHH
Confidence 3457889999999999866554 5678899999999999986 78999999999999999877777778899999999
Q ss_pred HHHHHhC-CHHHHHHHHHHHHHhhcC
Q 032259 83 REVEERG-SQRAKEKAKRILGMLKGR 107 (144)
Q Consensus 83 ~~Ll~~G-t~raK~kA~~lL~~L~~~ 107 (144)
+.++.++ .+..++.|..+|..|...
T Consensus 334 ~~lL~~~~~~~v~~~A~~~L~nl~~~ 359 (528)
T 4b8j_A 334 LSLLTQNLKKSIKKEACWTISNITAG 359 (528)
T ss_dssp HHHHHSCCCHHHHHHHHHHHHHHHTS
T ss_pred HHHHcCCCcHHHHHHHHHHHHHHHCC
Confidence 9999999 999999999999999864
No 30
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=98.69 E-value=1.8e-07 Score=77.85 Aligned_cols=96 Identities=18% Similarity=0.127 Sum_probs=86.6
Q ss_pred chHHHHHHHHHHhcCChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHH
Q 032259 6 ESTSRVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLREV 85 (144)
Q Consensus 6 ~~~E~AlavL~~La~~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~L 85 (144)
.+.+.++..|.+|+.+++++..|.+.|+||.|++++.++ .+.-++.|+.+|.+|+.. +..+..+.+.|+++.|..|
T Consensus 434 ~i~~~~~~al~~L~~~~~~~~~l~~~~~v~~l~~ll~~~---~~~v~~~a~~~l~~l~~~-~~~~~~i~~~~~~~~L~~l 509 (529)
T 1jdh_A 434 EIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSP---IENIQRVAAGVLCELAQD-KEAAEAIEAEGATAPLTEL 509 (529)
T ss_dssp HHHHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHGGGCS---CHHHHHHHHHHHHHHTTS-HHHHHHHHHTTCHHHHHHG
T ss_pred HHHHHHHHHHHHHhcCchHHHHHhccCCccHHHHHHcCC---chHHHHHHHHHHHHHhcC-HHHHHHHHHcCChHHHHHH
Confidence 345688999999999999999999999999999999987 788999999999999865 5567778899999999999
Q ss_pred HHhCCHHHHHHHHHHHHHhh
Q 032259 86 EERGSQRAKEKAKRILGMLK 105 (144)
Q Consensus 86 l~~Gt~raK~kA~~lL~~L~ 105 (144)
+.+.++..+++|..+|..|+
T Consensus 510 ~~~~~~~v~~~a~~aL~~l~ 529 (529)
T 1jdh_A 510 LHSRNEGVATYAAAVLFRMS 529 (529)
T ss_dssp GGCSSHHHHHHHHHHHHHHC
T ss_pred hcCCCHHHHHHHHHHHHhcC
Confidence 99999999999999998774
No 31
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=98.67 E-value=3.2e-07 Score=74.69 Aligned_cols=100 Identities=14% Similarity=0.155 Sum_probs=87.4
Q ss_pred cchHHHHHHHHHHhcCC-hhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHH
Q 032259 5 GESTSRVLLILCNLAAS-NEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLR 83 (144)
Q Consensus 5 ~~~~E~AlavL~~La~~-~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~ 83 (144)
..+.+.|+.+|.+|+.. ++.+..+.+.|++|.|+++|... ++..++.|+.+|.+|+.+++.......+.|++|.|+
T Consensus 248 ~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~---~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~ 324 (450)
T 2jdq_A 248 YKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHLLSSP---KESIKKEACWTISNITAGNRAQIQTVIDANIFPALI 324 (450)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHTTCS---SHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHH
T ss_pred hhHHHHHHHHHHHHhhCChHHHHHHHHCccHHHHHHHHcCC---CHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHH
Confidence 45788999999999975 55566778889999999999986 789999999999999987766666667789999999
Q ss_pred HHHHhCCHHHHHHHHHHHHHhhcC
Q 032259 84 EVEERGSQRAKEKAKRILGMLKGR 107 (144)
Q Consensus 84 ~Ll~~Gt~raK~kA~~lL~~L~~~ 107 (144)
.++.++.+..|+.|..+|..|...
T Consensus 325 ~~l~~~~~~v~~~a~~~L~~l~~~ 348 (450)
T 2jdq_A 325 SILQTAEFRTRKEAAWAITNATSG 348 (450)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHHHHHcC
Confidence 999999999999999999998764
No 32
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=98.67 E-value=2.4e-07 Score=80.91 Aligned_cols=99 Identities=17% Similarity=0.123 Sum_probs=89.3
Q ss_pred chHHHHHHHHHHhcCChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHH
Q 032259 6 ESTSRVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLREV 85 (144)
Q Consensus 6 ~~~E~AlavL~~La~~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~L 85 (144)
.+.+.|+.+|.+|+.+++++..|.+.|+||+|+++|.++ ++..++.|+.+|.+|+.. +..+..+.+.|+++.|..+
T Consensus 431 ~v~~~a~~aL~~La~~~~~~~~l~~~~~i~~Lv~lL~~~---~~~v~~~a~~aL~~l~~~-~~~~~~i~~~g~l~~L~~l 506 (644)
T 2z6h_A 431 EIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSP---IENIQRVAAGVLCELAQD-KEAAEAIEAEGATAPLTEL 506 (644)
T ss_dssp HHHHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHHTTCS---CHHHHHHHHHHHHHHHTS-HHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHhCCcHHHHHHHHcCC---CHHHHHHHHHHHHHHHcC-HHHHHHHHHcCChhHHHHH
Confidence 467889999999999999999999999999999999986 788999999999999965 5567788899999999999
Q ss_pred HHhCCHHHHHHHHHHHHHhhcCC
Q 032259 86 EERGSQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 86 l~~Gt~raK~kA~~lL~~L~~~~ 108 (144)
+.+..+..|+.|..+|..|....
T Consensus 507 l~~~~~~vr~~A~~aL~~l~~~~ 529 (644)
T 2z6h_A 507 LHSRNEGVATYAAAVLFRMSEDK 529 (644)
T ss_dssp TTCSCHHHHHHHHHHHHHHTTTS
T ss_pred HcCCCHHHHHHHHHHHHHHhccC
Confidence 99999999999999998887643
No 33
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=98.66 E-value=1.5e-07 Score=86.60 Aligned_cols=101 Identities=17% Similarity=0.145 Sum_probs=88.4
Q ss_pred CcchHHHHHHHHHHhcCChhhHHHHHh-cCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHH-cCcHHH
Q 032259 4 SGESTSRVLLILCNLAASNEGRSAILD-ANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKE-ARAAEV 81 (144)
Q Consensus 4 ~~~~~E~AlavL~~La~~~egr~aI~~-~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~-~Gai~~ 81 (144)
+..+.+.|+.+|+||+.+++.+..+.+ .|+++.|+.++... ....|+.|+.+|.+|+.+++.....+.+ .|.+|+
T Consensus 636 ~~~Vq~~A~~~L~NLa~~~~~~~~~v~~~g~l~~Lv~LL~s~---d~~vq~~Aa~ALanLt~~s~~~~~~ii~~~g~I~~ 712 (810)
T 3now_A 636 HLYLTRAAAQCLCNLVMSEDVIKMFEGNNDRVKFLALLCEDE---DEETATACAGALAIITSVSVKCCEKILAIASWLDI 712 (810)
T ss_dssp CTTHHHHHHHHHHHHTTSHHHHHHHHSSSSHHHHHHHGGGCS---SHHHHHHHHHHHHHHHHHCHHHHHHHHTSTTHHHH
T ss_pred CHHHHHHHHHHHHHHhCChHHHHHHHhccCcHHHHHHHhcCC---CHHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCHHH
Confidence 456789999999999999999999986 68999999999885 7889999999999999865543444445 899999
Q ss_pred HHHHHHhCCHHHHHHHHHHHHHhhcC
Q 032259 82 LREVEERGSQRAKEKAKRILGMLKGR 107 (144)
Q Consensus 82 L~~Ll~~Gt~raK~kA~~lL~~L~~~ 107 (144)
|+.|+.++....|+.|..+|.++-..
T Consensus 713 Lv~LL~s~d~~vq~~A~~aL~NL~~~ 738 (810)
T 3now_A 713 LHTLIANPSPAVQHRGIVIILNMINA 738 (810)
T ss_dssp HHHHHTCSSHHHHHHHHHHHHHHHTT
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999774
No 34
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=98.66 E-value=2.5e-07 Score=83.50 Aligned_cols=99 Identities=17% Similarity=0.123 Sum_probs=90.3
Q ss_pred chHHHHHHHHHHhcCChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHH
Q 032259 6 ESTSRVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLREV 85 (144)
Q Consensus 6 ~~~E~AlavL~~La~~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~L 85 (144)
.+.+.++.+|.+|+.+++++..|.+.|+||+|+++|.++ ++..++.|+.+|.+|+.. +..+..+.+.|+++.|+.|
T Consensus 567 ~v~~~a~~aL~~La~~~~~~~~l~~~~~i~~Lv~lL~~~---~~~v~~~a~~aL~~L~~~-~~~~~~i~~~g~i~~L~~L 642 (780)
T 2z6g_A 567 EIVEACTGALHILARDIHNRIVIRGLNTIPLFVQLLYSP---IENIQRVAAGVLCELAQD-KEAAEAIEAEGATAPLTEL 642 (780)
T ss_dssp HHHHHHHHHHHHHTTSHHHHHHHHHTCCHHHHHHGGGCS---CHHHHHHHHHHHHHHHTS-HHHHHHHHHTTCHHHHHHG
T ss_pred HHHHHHHHHHHHHhcChhhHHHHHHCCcHHHHHHHHcCC---CHHHHHHHHHHHHHHhcC-HHHHHHHHHCCCHHHHHHH
Confidence 467889999999999999999999999999999999987 799999999999999854 5567888899999999999
Q ss_pred HHhCCHHHHHHHHHHHHHhhcCC
Q 032259 86 EERGSQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 86 l~~Gt~raK~kA~~lL~~L~~~~ 108 (144)
+.+.++..|+.|..+|..|....
T Consensus 643 l~~~~~~Vr~~A~~aL~~l~~~~ 665 (780)
T 2z6g_A 643 LHSRNEGVATYAAAVLFRMSEDK 665 (780)
T ss_dssp GGCSCHHHHHHHHHHHHHHHTTS
T ss_pred HcCCCHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999988755
No 35
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=98.64 E-value=5.2e-07 Score=73.45 Aligned_cols=101 Identities=16% Similarity=0.148 Sum_probs=90.5
Q ss_pred cchHHHHHHHHHHhcC-ChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHH
Q 032259 5 GESTSRVLLILCNLAA-SNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLR 83 (144)
Q Consensus 5 ~~~~E~AlavL~~La~-~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~ 83 (144)
..+...|+.+|.+|+. .++....+.+.|+||.|+++|.+. ++..++.|+.+|.+|+..++..+..+...|+++.|+
T Consensus 79 ~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~---~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~ 155 (450)
T 2jdq_A 79 CTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSE---FEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLL 155 (450)
T ss_dssp HHHHHHHHHHHHHHHSSCHHHHHHHHHTTHHHHHHHHTTCS---CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHhCCCHHHHHHHHcCC---CHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHH
Confidence 3577899999999997 578888888899999999999986 799999999999999998777788888999999999
Q ss_pred HHHHh-CCHHHHHHHHHHHHHhhcCC
Q 032259 84 EVEER-GSQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 84 ~Ll~~-Gt~raK~kA~~lL~~L~~~~ 108 (144)
.++.+ ..+..++.|..+|..|....
T Consensus 156 ~~l~~~~~~~v~~~a~~~L~~l~~~~ 181 (450)
T 2jdq_A 156 QLFSKQNRLTMTRNAVWALSNLCRGK 181 (450)
T ss_dssp HHTTSCCCHHHHHHHHHHHHHHHCCS
T ss_pred HHhcCCCCHHHHHHHHHHHHHHhCCC
Confidence 99996 68999999999999998754
No 36
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=98.59 E-value=6.8e-07 Score=75.78 Aligned_cols=100 Identities=13% Similarity=0.112 Sum_probs=88.2
Q ss_pred cchHHHHHHHHHHhcC-ChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHH
Q 032259 5 GESTSRVLLILCNLAA-SNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLR 83 (144)
Q Consensus 5 ~~~~E~AlavL~~La~-~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~ 83 (144)
..+.+.|+.+|.+|+. +++....+.+.|++|.|+.+|..+ .+..++.|+.+|.+|+.+++.........|++|.|+
T Consensus 313 ~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~lL~~~---~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~ 389 (530)
T 1wa5_B 313 TLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSP---KENIKKEACWTISNITAGNTEQIQAVIDANLIPPLV 389 (530)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS---CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHH
T ss_pred hhhHHHHHHHHHHHHcCCHHHHHHHHHcchHHHHHHHHcCC---CHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHH
Confidence 3577899999999996 577788888899999999999986 789999999999999987765555566899999999
Q ss_pred HHHHhCCHHHHHHHHHHHHHhhcC
Q 032259 84 EVEERGSQRAKEKAKRILGMLKGR 107 (144)
Q Consensus 84 ~Ll~~Gt~raK~kA~~lL~~L~~~ 107 (144)
.++.++.+..|+.|..+|..|...
T Consensus 390 ~lL~~~~~~v~~~a~~aL~~l~~~ 413 (530)
T 1wa5_B 390 KLLEVAEYKTKKEACWAISNASSG 413 (530)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999765
No 37
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=98.50 E-value=5.7e-07 Score=82.43 Aligned_cols=81 Identities=14% Similarity=0.110 Sum_probs=69.3
Q ss_pred hHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHHHHhCCHH---HHHHHHHH
Q 032259 24 GRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLREVEERGSQR---AKEKAKRI 100 (144)
Q Consensus 24 gr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~Ll~~Gt~r---aK~kA~~l 100 (144)
++..+.++|+||+|+.++..+ ++..||.|+.+|++||.+ +..|..+.+.|++++|+.++.++++. .|..|+.+
T Consensus 449 ~~~~l~eaGvIp~Lv~Ll~S~---s~~~re~A~~aL~nLS~d-~~~R~~lvqqGal~~LL~lL~s~~~~~~~~k~~AA~A 524 (778)
T 3opb_A 449 NEKYILRTELISFLKREMHNL---SPNCKQQVVRIIYNITRS-KNFIPQLAQQGAVKIILEYLANKQDIGEPIRILGCRA 524 (778)
T ss_dssp HHHHTTTTTHHHHHHHHGGGS---CHHHHHHHHHHHHHHHTS-GGGHHHHHHTTHHHHHHHHTTCC---CCHHHHHHHHH
T ss_pred HHHHHHHCcCHHHHHHHHcCC---CHHHHHHHHHHHHHHcCC-HHHHHHHHHCCCHHHHHHHHhcCCCcchHHHHHHHHH
Confidence 567778899999999999987 899999999999999965 56688888999999999999999765 89999999
Q ss_pred HHHhhcCC
Q 032259 101 LGMLKGRE 108 (144)
Q Consensus 101 L~~L~~~~ 108 (144)
|..+--..
T Consensus 525 LArLlis~ 532 (778)
T 3opb_A 525 LTRMLIFT 532 (778)
T ss_dssp HHHHHHTS
T ss_pred HHHHHhcC
Confidence 98887543
No 38
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=98.16 E-value=2.5e-06 Score=78.16 Aligned_cols=104 Identities=20% Similarity=0.120 Sum_probs=81.4
Q ss_pred CcchHHHHHHHHHHhcCChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhc-cChHHHHHH--HHcCcHH
Q 032259 4 SGESTSRVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGH-GNLRFKGLA--KEARAAE 80 (144)
Q Consensus 4 ~~~~~E~AlavL~~La~~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~-~~~~~~~~a--~~~Gai~ 80 (144)
+.++.+.|+.+|.+|+..+++|..+++.|++++|+++|.++.....+.|++|+.+|.+|.. .++.. ... ...|+||
T Consensus 470 s~~~re~A~~aL~nLS~d~~~R~~lvqqGal~~LL~lL~s~~~~~~~~k~~AA~ALArLlis~np~~-~f~~~~~~~aI~ 548 (778)
T 3opb_A 470 SPNCKQQVVRIIYNITRSKNFIPQLAQQGAVKIILEYLANKQDIGEPIRILGCRALTRMLIFTNPGL-IFKKYSALNAIP 548 (778)
T ss_dssp CHHHHHHHHHHHHHHHTSGGGHHHHHHTTHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHTSCHHH-HSSSSCSTTHHH
T ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhcCCHHH-HcCCCccccchH
Confidence 3567899999999999999999999999999999999999721112389999999999986 44432 111 1149999
Q ss_pred HHHHHHHh--CC------------HHHHHHHHHHHHHhhcCC
Q 032259 81 VLREVEER--GS------------QRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 81 ~L~~Ll~~--Gt------------~raK~kA~~lL~~L~~~~ 108 (144)
+|+.|+.. ++ ...+..|..+|.+|....
T Consensus 549 pLv~LL~~~~~~~~~~l~~~~~~~~l~~feAL~ALTNLAs~~ 590 (778)
T 3opb_A 549 FLFELLPRSTPVDDNPLHNDEQIKLTDNYEALLALTNLASSE 590 (778)
T ss_dssp HHHHTSCCSSSCSSCC---CCCCCHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHcCCCCCcccccccccccccHHHHHHHHHHHHHHhcCC
Confidence 99999983 22 255889999999999874
No 39
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=97.31 E-value=0.0012 Score=59.60 Aligned_cols=98 Identities=23% Similarity=0.168 Sum_probs=81.2
Q ss_pred hHHHHHHHHHHhcC-Chh-hHHHHHh-cCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHH
Q 032259 7 STSRVLLILCNLAA-SNE-GRSAILD-ANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLR 83 (144)
Q Consensus 7 ~~E~AlavL~~La~-~~e-gr~aI~~-~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~ 83 (144)
..-.++..|..|+. .++ ..++|.. +++|+.||.+|.+. ...-|-.|+..|-.|+.++...++++..+|+++.|.
T Consensus 138 vR~~alqlL~~L~~~r~~~~Q~~Il~~p~gi~~Lv~lL~d~---rE~iRneallLL~~Lt~~n~~iQklVAFEnaFe~Lf 214 (651)
T 3grl_A 138 VRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADS---REVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLL 214 (651)
T ss_dssp HHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGGCS---SHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHhCcccHHHHHHHHhCc---hHHHHHHHHHHHHHHhcCCHHHHHHHHHhccHHHHH
Confidence 44578889999985 555 7899985 68999999999974 566788999999999999999999999999999999
Q ss_pred HHHHhC----CHHHHHHHHHHHHHhhcC
Q 032259 84 EVEERG----SQRAKEKAKRILGMLKGR 107 (144)
Q Consensus 84 ~Ll~~G----t~raK~kA~~lL~~L~~~ 107 (144)
.+++.. ....-+.+..+|..|-+.
T Consensus 215 ~Ii~~Eg~~~Ggivv~DCL~ll~nLLr~ 242 (651)
T 3grl_A 215 DIITEEGNSDGGIVVEDCLILLQNLLKN 242 (651)
T ss_dssp HHHHHHTGGGSHHHHHHHHHHHHHHHTT
T ss_pred HHHHhcCCCccchhHHHHHHHHHHHHhc
Confidence 998753 346667777777777665
No 40
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=97.23 E-value=0.0018 Score=57.62 Aligned_cols=83 Identities=12% Similarity=0.099 Sum_probs=68.9
Q ss_pred CcchHHHHHHHHHHhcCChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhcc-ChHHHHHHHHcCcHHHH
Q 032259 4 SGESTSRVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHG-NLRFKGLAKEARAAEVL 82 (144)
Q Consensus 4 ~~~~~E~AlavL~~La~~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~-~~~~~~~a~~~Gai~~L 82 (144)
+.+..+.|+..|.+|+..++.+..+...++|++++.-+... .+..-++.|+.+|-+||.. ....+..+.+.|++++|
T Consensus 47 ~~~~r~~A~~al~~l~~~~~~~~l~~~~~~v~~ll~~lL~D--~~~~Vr~~A~gaLrnL~~~~g~d~~~~l~~~~il~~L 124 (684)
T 4gmo_A 47 DAKSRTTAAGAIANIVQDAKCRKLLLREQVVHIVLTETLTD--NNIDSRAAGWEILKVLAQEEEADFCVHLYRLDVLTAI 124 (684)
T ss_dssp CCSHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHTTTTC--SCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCcHHHHHHHHcCCHHHHHHHHcCC--CCHHHHHHHHHHHHHHHhhcCchHHHHHHHcChHHHH
Confidence 34667889999999999999999999999998876654332 2788999999999999984 45667777899999999
Q ss_pred HHHHHh
Q 032259 83 REVEER 88 (144)
Q Consensus 83 ~~Ll~~ 88 (144)
..+++.
T Consensus 125 ~~~l~~ 130 (684)
T 4gmo_A 125 EHAAKA 130 (684)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999864
No 41
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=97.01 E-value=0.00056 Score=60.89 Aligned_cols=104 Identities=13% Similarity=-0.061 Sum_probs=76.7
Q ss_pred CcchHHHHHHHHHHhcCC--hhhHHHHHhcCcHHHHHHHhhcCCC-----------CCh-------HHHHHHHHHHHHHh
Q 032259 4 SGESTSRVLLILCNLAAS--NEGRSAILDANGVSILVGMLKESGS-----------DSE-------ATRENCVAALFALG 63 (144)
Q Consensus 4 ~~~~~E~AlavL~~La~~--~egr~aI~~~g~I~~LV~lL~~G~~-----------~S~-------~~kE~Ava~L~~Lc 63 (144)
+..+++.|+.+|.||+.+ ++....+.+.|.+++|..+|+.... .+. .-.++++.+||+||
T Consensus 89 ~~~Vr~~A~gaLrnL~~~~g~d~~~~l~~~~il~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lL~~L~ 168 (684)
T 4gmo_A 89 NIDSRAAGWEILKVLAQEEEADFCVHLYRLDVLTAIEHAAKAVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIGLLA 168 (684)
T ss_dssp CHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTHHHHHHHHHHHHHHHHHCBTTBGGGSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhcCchHHHHHHHcChHHHHHHHHHhhHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 346789999999999964 6778888999999999999864100 001 12468899999999
Q ss_pred ccChHHHHHHHHcCcHHHHHHHHHhC---CHHHHHHHHHHHHHhhcC
Q 032259 64 HGNLRFKGLAKEARAAEVLREVEERG---SQRAKEKAKRILGMLKGR 107 (144)
Q Consensus 64 ~~~~~~~~~a~~~Gai~~L~~Ll~~G---t~raK~kA~~lL~~L~~~ 107 (144)
..++.....+...+.++.|+.++.+. ....+..|...|..|...
T Consensus 169 e~s~~~~~~v~~~~~l~~l~~~L~~~~~~~~~v~~~a~~~L~~ls~d 215 (684)
T 4gmo_A 169 LARDEIHEAVATKQTILRLLFRLISADIAPQDIYEEAISCLTTLSED 215 (684)
T ss_dssp HHCHHHHHHHHTCHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHTT
T ss_pred hCCHHHHHHHHhcccHHHHHHHHHhcCCCcHHHHHHHHHHHHHHhcc
Confidence 97765555566789999999998553 355667777777777654
No 42
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=95.96 E-value=0.037 Score=49.94 Aligned_cols=102 Identities=16% Similarity=0.126 Sum_probs=80.5
Q ss_pred CcchHHHHHHHHHHhcCC-hh-----------------hHHHHH-hcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhc
Q 032259 4 SGESTSRVLLILCNLAAS-NE-----------------GRSAIL-DANGVSILVGMLKESGSDSEATRENCVAALFALGH 64 (144)
Q Consensus 4 ~~~~~E~AlavL~~La~~-~e-----------------gr~aI~-~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~ 64 (144)
+.+++..++.+|.++-.. ++ ....+. +.+.|+.|+++|... .-..|-+++-.|-.||.
T Consensus 75 D~e~v~~~LetL~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~~~~i~~Ll~lL~~~---df~vR~~alqlL~~L~~ 151 (651)
T 3grl_A 75 DSEIIGYALDTLYNIISNDEEEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEEF---DFHVRWPGVKLLTSLLK 151 (651)
T ss_dssp CHHHHHHHHHHHHHHHCCC--------------CHHHHHHHHHHHSTHHHHHHHHHTTCC---CHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhCCCCcccccccccccchHHHHHHHHHHHcCCccHHHHHHHhcCc---cHHHHHHHHHHHHHHHh
Confidence 456777888888776542 21 122343 457899999999875 78899999999999999
Q ss_pred cChH-HHHHHH-HcCcHHHHHHHHHhCCHHHHHHHHHHHHHhhcCC
Q 032259 65 GNLR-FKGLAK-EARAAEVLREVEERGSQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 65 ~~~~-~~~~a~-~~Gai~~L~~Ll~~Gt~raK~kA~~lL~~L~~~~ 108 (144)
.++. .+..+. .+++|+.|+.++.+..+.-|..|..+|..|.+..
T Consensus 152 ~r~~~~Q~~Il~~p~gi~~Lv~lL~d~rE~iRneallLL~~Lt~~n 197 (651)
T 3grl_A 152 QLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRSN 197 (651)
T ss_dssp HSHHHHHHHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTTC
T ss_pred cCcHHHHHHHHhCcccHHHHHHHHhCchHHHHHHHHHHHHHHhcCC
Confidence 7654 566555 6799999999999999999999999999999874
No 43
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=95.73 E-value=0.054 Score=39.66 Aligned_cols=45 Identities=20% Similarity=0.164 Sum_probs=27.6
Q ss_pred chHHHHHHHHHHhcCChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHh
Q 032259 6 ESTSRVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALG 63 (144)
Q Consensus 6 ~~~E~AlavL~~La~~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc 63 (144)
.+...|+..|..+.. ...++.|+++|.+. ++..+..|+.+|..+.
T Consensus 96 ~vr~~a~~aL~~~~~----------~~~~~~L~~~l~d~---~~~vr~~a~~aL~~~~ 140 (211)
T 3ltm_A 96 WVRQSAAVALGQIGD----------ERAVEPLIKALKDE---DWFVRIAAAFALGEIG 140 (211)
T ss_dssp HHHHHHHHHHHHHCC----------GGGHHHHHHHTTCS---SHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCc----------HHHHHHHHHHHhCC---CHHHHHHHHHHHHHcC
Confidence 455666666666543 24566777776654 5666776666666553
No 44
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=95.58 E-value=0.059 Score=39.16 Aligned_cols=44 Identities=20% Similarity=0.200 Sum_probs=26.7
Q ss_pred hHHHHHHHHHHhcCChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHh
Q 032259 7 STSRVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALG 63 (144)
Q Consensus 7 ~~E~AlavL~~La~~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc 63 (144)
+...|+..|..+.. ...++.|+++|.+. ++..|..|+.+|..+.
T Consensus 92 vr~~a~~aL~~~~~----------~~~~~~L~~~l~d~---~~~vr~~a~~aL~~~~ 135 (201)
T 3ltj_A 92 VRQSAAVALGQIGD----------ERAVEPLIKALKDE---DWFVRIAAAFALGEIG 135 (201)
T ss_dssp HHHHHHHHHHHHCC----------GGGHHHHHHHTTCS---SHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCc----------HHHHHHHHHHHcCC---CHHHHHHHHHHHHHhC
Confidence 55666666666543 23566777776653 5666777766666553
No 45
>2fv2_A RCD1 required for cell differentiation1 homolog; armadillo-repeat, transcription; 2.20A {Homo sapiens}
Probab=95.40 E-value=0.16 Score=41.27 Aligned_cols=96 Identities=22% Similarity=0.177 Sum_probs=77.1
Q ss_pred HHHHHHHHHHhcCChhhHHHHHhcCcHHHHHHHhhcCCCCChHH----HHHHHHHHHHHhc-cChHHHHHHHHcCcHHHH
Q 032259 8 TSRVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEAT----RENCVAALFALGH-GNLRFKGLAKEARAAEVL 82 (144)
Q Consensus 8 ~E~AlavL~~La~~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~----kE~Ava~L~~Lc~-~~~~~~~~a~~~Gai~~L 82 (144)
+-.|+++|--+|+||+-|..+.++.-.--|-..|.... ..+. |=.+.+++..|.. ++.++-.--....+||.+
T Consensus 73 VcnaLaLlQcvAshpetr~~Fl~a~iplyLyPfL~t~s--k~r~fE~LRLtsLGVIgaLvK~dd~eVi~fLL~tEiiplC 150 (268)
T 2fv2_A 73 VCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVS--KTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLC 150 (268)
T ss_dssp HHHHHHHHHHHHHCTTTHHHHHHTTGGGGTHHHHHCCC--CSHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHcCcchhhHHHHccchHHhhhhhcccc--CCCcchhhhhhHHHHHHHHhccCcHHHHHHHHhhhHHHHH
Confidence 56899999999999999999999876556777787752 2222 6668888888887 445555555678899999
Q ss_pred HHHHHhCCHHHHHHHHHHHHHhh
Q 032259 83 REVEERGSQRAKEKAKRILGMLK 105 (144)
Q Consensus 83 ~~Ll~~Gt~raK~kA~~lL~~L~ 105 (144)
+...+.|+...|..|.-+++.+=
T Consensus 151 Lrime~GselSKtvAtfIlqKIL 173 (268)
T 2fv2_A 151 LRIMESGSELSKTVATFILQKIL 173 (268)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHHhhccHHHHHHHHHHHHHHh
Confidence 99999999999999999887664
No 46
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=95.19 E-value=0.14 Score=37.40 Aligned_cols=29 Identities=28% Similarity=0.366 Sum_probs=20.4
Q ss_pred CcHHHHHHHhhcCCCCChHHHHHHHHHHHHHh
Q 032259 32 NGVSILVGMLKESGSDSEATRENCVAALFALG 63 (144)
Q Consensus 32 g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc 63 (144)
..++.|++.|.+. ++..|..|+.+|..+.
T Consensus 81 ~~~~~L~~~l~~~---~~~vr~~a~~aL~~~~ 109 (211)
T 3ltm_A 81 RAVEPLIKALKDE---DGWVRQSAAVALGQIG 109 (211)
T ss_dssp GGHHHHHHHTTCS---SHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCC---CHHHHHHHHHHHHHhC
Confidence 3677777777664 6777777777776654
No 47
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=95.13 E-value=0.019 Score=39.82 Aligned_cols=58 Identities=21% Similarity=0.134 Sum_probs=30.8
Q ss_pred HHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHHHHhCCHHHHHHHHHHHHHhh
Q 032259 34 VSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLREVEERGSQRAKEKAKRILGMLK 105 (144)
Q Consensus 34 I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~Ll~~Gt~raK~kA~~lL~~L~ 105 (144)
++.|+++|.+. ++..|..|+.+|..+.. ..+++.|..++.+..+..|..|...|..+.
T Consensus 44 ~~~L~~~L~d~---~~~vR~~A~~aL~~~~~-----------~~a~~~L~~~L~d~~~~VR~~A~~aL~~~~ 101 (131)
T 1te4_A 44 FEPLLESLSNE---DWRIRGAAAWIIGNFQD-----------ERAVEPLIKLLEDDSGFVRSGAARSLEQIG 101 (131)
T ss_dssp HHHHHHGGGCS---CHHHHHHHHHHHGGGCS-----------HHHHHHHHHHHHHCCTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCC---CHHHHHHHHHHHHhcCC-----------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhC
Confidence 45566666543 45556665555554431 123555555555555555555555555444
No 48
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=95.04 E-value=0.18 Score=36.54 Aligned_cols=86 Identities=20% Similarity=0.192 Sum_probs=53.3
Q ss_pred chHHHHHHHHHHhcCChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhc-------------cChHHHHH
Q 032259 6 ESTSRVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGH-------------GNLRFKGL 72 (144)
Q Consensus 6 ~~~E~AlavL~~La~~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~-------------~~~~~~~~ 72 (144)
.+...|+..|..+.. ..+++.|++.|.+. ++..|..|+.+|..+.. .++.++..
T Consensus 60 ~vr~~a~~~L~~~~~----------~~~~~~L~~~l~d~---~~~vr~~a~~aL~~~~~~~~~~~L~~~l~d~~~~vr~~ 126 (201)
T 3ltj_A 60 WVRRAAADALGQIGD----------ERAVEPLIKALKDE---DGWVRQSAAVALGQIGDERAVEPLIKALKDEDWFVRIA 126 (201)
T ss_dssp HHHHHHHHHHHHHCC----------GGGHHHHHHHTTCS---SHHHHHHHHHHHHHHCCGGGHHHHHHHTTCSSHHHHHH
T ss_pred HHHHHHHHHHHhhCC----------HHHHHHHHHHHcCC---CHHHHHHHHHHHHHhCcHHHHHHHHHHHcCCCHHHHHH
Confidence 355666666666542 35678888888764 67778888877776542 11222222
Q ss_pred HH-------HcCcHHHHHHHHHhCCHHHHHHHHHHHHHh
Q 032259 73 AK-------EARAAEVLREVEERGSQRAKEKAKRILGML 104 (144)
Q Consensus 73 a~-------~~Gai~~L~~Ll~~Gt~raK~kA~~lL~~L 104 (144)
+. ...+++.|..++.+..+..|..|...|..+
T Consensus 127 a~~aL~~~~~~~~~~~L~~~l~d~~~~vr~~A~~aL~~~ 165 (201)
T 3ltj_A 127 AAFALGEIGDERAVEPLIKALKDEDGWVRQSAADALGEI 165 (201)
T ss_dssp HHHHHHHHTCGGGHHHHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 21 124566777777777777777777777666
No 49
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=94.27 E-value=0.21 Score=38.12 Aligned_cols=62 Identities=16% Similarity=0.175 Sum_probs=46.9
Q ss_pred CcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHHHHhCCHHHHHHHHHHHHHhh
Q 032259 32 NGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLREVEERGSQRAKEKAKRILGMLK 105 (144)
Q Consensus 32 g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~Ll~~Gt~raK~kA~~lL~~L~ 105 (144)
..+|.|+++|.+. .+..+..|+.+|..+...+ +.+++.|..++.+..+..|..|...|..+.
T Consensus 159 ~~~~~L~~~l~d~---~~~vr~~a~~aL~~~~~~~---------~~~~~~L~~~l~d~~~~vR~~A~~aL~~~~ 220 (280)
T 1oyz_A 159 ATIPLLINLLKDP---NGDVRNWAAFAININKYDN---------SDIRDCFVEMLQDKNEEVRIEAIIGLSYRK 220 (280)
T ss_dssp CCHHHHHHHHTCS---SHHHHHHHHHHHHHHTCCC---------HHHHHHHHHHTTCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCC---CHHHHHHHHHHHHhhccCc---------HHHHHHHHHHhcCCCHHHHHHHHHHHHHhC
Confidence 4788888888775 6778888888888775332 235678888888888888888888877664
No 50
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=93.81 E-value=0.2 Score=38.17 Aligned_cols=64 Identities=9% Similarity=-0.025 Sum_probs=32.5
Q ss_pred cHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHH-HHHhCCHHHHHHHHHHHHHhh
Q 032259 33 GVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLRE-VEERGSQRAKEKAKRILGMLK 105 (144)
Q Consensus 33 ~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~-Ll~~Gt~raK~kA~~lL~~L~ 105 (144)
.++.|+++|.+. .+..|..|+.+|..+....... ..+++.|.. ++.+..+..|..|..+|..+.
T Consensus 55 ~~~~L~~~l~d~---~~~vR~~A~~aL~~l~~~~~~~------~~l~~~L~~~~~~d~~~~vr~~a~~aL~~l~ 119 (280)
T 1oyz_A 55 AVRLAIEFCSDK---NYIRRDIGAFILGQIKICKKCE------DNVFNILNNMALNDKSACVRATAIESTAQRC 119 (280)
T ss_dssp HHHHHHHHHTCS---SHHHHHHHHHHHHHSCCCTTTH------HHHHHHHHHHHHHCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCC---CHHHHHHHHHHHHHhccccccc------hHHHHHHHHHHhcCCCHHHHHHHHHHHHHHh
Confidence 455555555543 4555555555555544321110 013333432 334557777777777777776
No 51
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=92.85 E-value=0.65 Score=34.85 Aligned_cols=93 Identities=11% Similarity=0.009 Sum_probs=66.7
Q ss_pred cchHHHHHHHHHHhcCChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhc-cChH--HHHHHHHcCcHHH
Q 032259 5 GESTSRVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGH-GNLR--FKGLAKEARAAEV 81 (144)
Q Consensus 5 ~~~~E~AlavL~~La~~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~-~~~~--~~~~a~~~Gai~~ 81 (144)
..+.+.|..+|..+..+..- ...+|.|...|... ++..|+.++..|-.+.. ..+. .... -.-++|.
T Consensus 112 ~~vr~~a~~aL~~~~~~~~~------~~ll~~l~~~l~~~---~~~vr~~~l~~l~~~l~~~~~~~~~~~~--l~~l~p~ 180 (242)
T 2qk2_A 112 PNVVTALREAIDAIYASTSL------EAQQESIVESLSNK---NPSVKSETALFIARALTRTQPTALNKKL--LKLLTTS 180 (242)
T ss_dssp HHHHHHHHHHHHHHHTTSCH------HHHHHHHHHHTTCS---CHHHHHHHHHHHHHHHTTCCGGGCCHHH--HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCH------HHHHHHHHHHHcCC---ChHHHHHHHHHHHHHHHHcCCCCccHHH--HHHHHHH
Confidence 34667777777777764321 12466777888765 79999999999999643 3222 1222 2357999
Q ss_pred HHHHHHhCCHHHHHHHHHHHHHhhcCC
Q 032259 82 LREVEERGSQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 82 L~~Ll~~Gt~raK~kA~~lL~~L~~~~ 108 (144)
|+.++.+..+..|..|...|..+...-
T Consensus 181 l~~~l~D~~~~VR~~A~~~l~~l~~~v 207 (242)
T 2qk2_A 181 LVKTLNEPDPTVRDSSAEALGTLIKLM 207 (242)
T ss_dssp HHHHHTSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCChHHHHHHHHHHHHHHHHc
Confidence 999999999999999999998887654
No 52
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=92.79 E-value=0.25 Score=33.89 Aligned_cols=68 Identities=21% Similarity=0.234 Sum_probs=48.7
Q ss_pred ChhhHHHHHhc-CcH------HHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHHHHhCCHHH
Q 032259 21 SNEGRSAILDA-NGV------SILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLREVEERGSQRA 93 (144)
Q Consensus 21 ~~egr~aI~~~-g~I------~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~Ll~~Gt~ra 93 (144)
++.-|...... |.+ +.|++.|.+. ++..|..|+.+|..+.. ..+++.|..++.+..+..
T Consensus 55 ~~~vR~~A~~aL~~~~~~~a~~~L~~~L~d~---~~~VR~~A~~aL~~~~~-----------~~a~~~L~~~l~d~~~~v 120 (131)
T 1te4_A 55 DWRIRGAAAWIIGNFQDERAVEPLIKLLEDD---SGFVRSGAARSLEQIGG-----------ERVRAAMEKLAETGTGFA 120 (131)
T ss_dssp CHHHHHHHHHHHGGGCSHHHHHHHHHHHHHC---CTHHHHHHHHHHHHHCS-----------HHHHHHHHHHTTSCCTHH
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHcCC---CHHHHHHHHHHHHHhCc-----------HHHHHHHHHHHhCCCHHH
Confidence 45555555442 444 4667777764 68889999988887762 346889999998888889
Q ss_pred HHHHHHHHH
Q 032259 94 KEKAKRILG 102 (144)
Q Consensus 94 K~kA~~lL~ 102 (144)
|..|...|.
T Consensus 121 r~~A~~aL~ 129 (131)
T 1te4_A 121 RKVAVNYLE 129 (131)
T ss_dssp HHHHHHHGG
T ss_pred HHHHHHHHH
Confidence 988887764
No 53
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=92.54 E-value=0.3 Score=36.80 Aligned_cols=90 Identities=14% Similarity=0.036 Sum_probs=65.3
Q ss_pred chHHHHHHHHHHhcCChhhHHHHHh--cCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHH
Q 032259 6 ESTSRVLLILCNLAASNEGRSAILD--ANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLR 83 (144)
Q Consensus 6 ~~~E~AlavL~~La~~~egr~aI~~--~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~ 83 (144)
.+...|+.+|..|+..- +..+.. .-.+|.|++.+.+. ++..|+.|..+|..++.... . .-++|.|.
T Consensus 72 ~V~~~a~~~l~~la~~l--~~~~~~~~~~ilp~ll~~l~d~---~~~vr~~a~~aL~~~~~~~~-~------~~ll~~l~ 139 (242)
T 2qk2_A 72 VLVAMAGKCLALLAKGL--AKRFSNYASACVPSLLEKFKEK---KPNVVTALREAIDAIYASTS-L------EAQQESIV 139 (242)
T ss_dssp HHHHHHHHHHHHHHHHH--GGGGHHHHHHHHHHHHHGGGCC---CHHHHHHHHHHHHHHHTTSC-H------HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHHcCC---CHHHHHHHHHHHHHHHHcCC-H------HHHHHHHH
Confidence 45678888888888421 112211 23678888888875 78999999999999987432 1 12678888
Q ss_pred HHHHhCCHHHHHHHHHHHHHhhcC
Q 032259 84 EVEERGSQRAKEKAKRILGMLKGR 107 (144)
Q Consensus 84 ~Ll~~Gt~raK~kA~~lL~~L~~~ 107 (144)
..+++.+++.|..+...|..+-..
T Consensus 140 ~~l~~~~~~vr~~~l~~l~~~l~~ 163 (242)
T 2qk2_A 140 ESLSNKNPSVKSETALFIARALTR 163 (242)
T ss_dssp HHTTCSCHHHHHHHHHHHHHHHTT
T ss_pred HHHcCCChHHHHHHHHHHHHHHHH
Confidence 888888999999999999885433
No 54
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=92.30 E-value=0.15 Score=45.29 Aligned_cols=99 Identities=13% Similarity=0.032 Sum_probs=70.6
Q ss_pred cchHHHHHHHHHHhcCChhhHHHHH--hcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHH
Q 032259 5 GESTSRVLLILCNLAASNEGRSAIL--DANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVL 82 (144)
Q Consensus 5 ~~~~E~AlavL~~La~~~egr~aI~--~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L 82 (144)
....+.|+.+|..++..... .+. -...+|.|++.|.+. ++.-|..|+-+|..+|..-...........+++.|
T Consensus 373 ~~~R~aa~~alg~i~~~~~~--~~~~~l~~~l~~l~~~l~d~---~~~Vr~~a~~~l~~l~~~~~~~~~~~~~~~ll~~L 447 (852)
T 4fdd_A 373 WVVKESGILVLGAIAEGCMQ--GMIPYLPELIPHLIQCLSDK---KALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTEL 447 (852)
T ss_dssp HHHHHHHHHHHHHTTTTTHH--HHGGGHHHHHHHHHHHTTCS---SHHHHHHHHHHHHHTHHHHHHSCTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcchH--HHHHHHHHHHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 34667888889999864332 221 134688899999775 78999999999999986211100011124578999
Q ss_pred HHHHHhCCHHHHHHHHHHHHHhhcCC
Q 032259 83 REVEERGSQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 83 ~~Ll~~Gt~raK~kA~~lL~~L~~~~ 108 (144)
+..+.+..++.|+.|..+|..|.+..
T Consensus 448 ~~~L~d~~~~vr~~a~~aL~~l~~~~ 473 (852)
T 4fdd_A 448 LKRILDSNKRVQEAACSAFATLEEEA 473 (852)
T ss_dssp HHHHTCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHh
Confidence 99998889999999999999887654
No 55
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=90.96 E-value=0.83 Score=39.33 Aligned_cols=69 Identities=14% Similarity=0.148 Sum_probs=56.4
Q ss_pred HHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHHHHhCCHHHHHHHHHHHHHhhcCC
Q 032259 34 VSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLREVEERGSQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 34 I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~Ll~~Gt~raK~kA~~lL~~L~~~~ 108 (144)
+|.+.++|.+. ++.-|..|+.+|..++..++.. ....+.++.|..++.+..+..+..|..+|..+....
T Consensus 123 ~~~l~~~L~d~---~~~VRk~A~~al~~i~~~~p~~---~~~~~~~~~l~~lL~d~d~~V~~~A~~aL~~i~~~~ 191 (591)
T 2vgl_B 123 CEPLRKCLKDE---DPYVRKTAAVCVAKLHDINAQM---VEDQGFLDSLRDLIADSNPMVVANAVAALSEISESH 191 (591)
T ss_dssp HHHHHHHSSCS---CHHHHHHHHHHHHHHHHSSCCC---HHHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHcCCC---ChHHHHHHHHHHHHHHhhChhh---cccccHHHHHHHHhCCCChhHHHHHHHHHHHHHhhC
Confidence 46688888764 7999999999999999854431 223678999999999889999999999999887754
No 56
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=87.48 E-value=0.18 Score=43.50 Aligned_cols=89 Identities=13% Similarity=0.095 Sum_probs=55.6
Q ss_pred hHHHHHHHHHHhcC-ChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHH
Q 032259 7 STSRVLLILCNLAA-SNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLREV 85 (144)
Q Consensus 7 ~~E~AlavL~~La~-~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~L 85 (144)
+...|+..|.++.. +|+ .+-+.+.++.|.++|.+. ++..+.+|+.+|..+|..++...........++.|+..
T Consensus 137 VRk~A~~al~~i~~~~p~---~~~~~~~~~~l~~lL~d~---d~~V~~~A~~aL~~i~~~~~~~~~~~l~~~~~~~Ll~~ 210 (591)
T 2vgl_B 137 VRKTAAVCVAKLHDINAQ---MVEDQGFLDSLRDLIADS---NPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTA 210 (591)
T ss_dssp HHHHHHHHHHHHHHSSCC---CHHHHHHHHHHHHTTSCS---CHHHHHHHHHHHHHHTTSCCSCCSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhChh---hcccccHHHHHHHHhCCC---ChhHHHHHHHHHHHHHhhCCCccchhccHHHHHHHHHc
Confidence 44555555555553 233 112235678888888764 78999999999999998654211111123456777777
Q ss_pred HHhCCHHHHHHHHHHH
Q 032259 86 EERGSQRAKEKAKRIL 101 (144)
Q Consensus 86 l~~Gt~raK~kA~~lL 101 (144)
+...++..+-+.-.+|
T Consensus 211 l~~~~~~~q~~il~~l 226 (591)
T 2vgl_B 211 LNECTEWGQIFILDCL 226 (591)
T ss_dssp HHHCCHHHHHHHHHHH
T ss_pred CCCCCchHHHHHHHHH
Confidence 7777888776543333
No 57
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=87.30 E-value=4.3 Score=33.79 Aligned_cols=102 Identities=11% Similarity=0.016 Sum_probs=77.2
Q ss_pred CcchHHHHHHHHHHhcCChhhHHHHHhc-CcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccCh-HHHH-------HHH
Q 032259 4 SGESTSRVLLILCNLAASNEGRSAILDA-NGVSILVGMLKESGSDSEATRENCVAALFALGHGNL-RFKG-------LAK 74 (144)
Q Consensus 4 ~~~~~E~AlavL~~La~~~egr~aI~~~-g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~-~~~~-------~a~ 74 (144)
+++..--++..|..|-.+..|...|+.+ ..|.-|+.++.+- ...-..-|..+|..+|..++ .... .+.
T Consensus 173 ~gN~q~Y~L~AL~~LM~~v~Gm~gvvs~~~fI~~lyslv~s~---~~~V~k~AL~LL~v~V~~se~~~~lv~~av~~v~~ 249 (339)
T 3dad_A 173 DHNYQSYILRALGQLMLFVDGMLGVVAHSDTIQWLYTLCASL---SRLVVKTALKLLLVFVEYSENNAPLFIRAVNSVAS 249 (339)
T ss_dssp CHHHHHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHHGGGCS---CHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhccccccchhCCHHHHHHHHHHHcCc---cHHHHHHHHHHHHHHHccCcccchHHHHHHHHhhh
Confidence 4667788999999999999999999864 5788888888853 67778999999999998554 2222 222
Q ss_pred HcC--cHHHHHHHHH---hCCHHHHHHHHHHHHHhhcCC
Q 032259 75 EAR--AAEVLREVEE---RGSQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 75 ~~G--ai~~L~~Ll~---~Gt~raK~kA~~lL~~L~~~~ 108 (144)
..| ..+.|+.+++ ++....+-+|..||.-+=...
T Consensus 250 ~~~~~p~~~Lv~~L~~~~~~D~elq~~amtLIN~lL~~a 288 (339)
T 3dad_A 250 TTGAPPWANLVSILEEKNGADPELLVYTVTLINKTLAAL 288 (339)
T ss_dssp HHCCCTTHHHHHHHTTTTSCCHHHHHHHHHHHHHHHHHC
T ss_pred ccCCCcHHHHHHHHhccCCCCHHHHHHHHHHHHHHHhcC
Confidence 233 3778999997 678999999999886554443
No 58
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=87.29 E-value=4.6 Score=33.60 Aligned_cols=97 Identities=14% Similarity=0.086 Sum_probs=75.4
Q ss_pred HHHHHHHHH-hcCChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHHHH
Q 032259 9 SRVLLILCN-LAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLREVEE 87 (144)
Q Consensus 9 E~AlavL~~-La~~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~Ll~ 87 (144)
-+++--|.. ++...+--.++++.+|+..|++++..+ ....+-++..+|..|=.....+..++..+-.|..|+.++.
T Consensus 136 r~aLfsLk~~~q~D~~Fa~EFI~~~GL~~Li~vi~~~---~gN~q~Y~L~AL~~LM~~v~Gm~gvvs~~~fI~~lyslv~ 212 (339)
T 3dad_A 136 RRSLFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAAA---DHNYQSYILRALGQLMLFVDGMLGVVAHSDTIQWLYTLCA 212 (339)
T ss_dssp HHHHHHHHHHHHTCTTHHHHHHHTTHHHHHHHHHTTS---CHHHHHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHHGGG
T ss_pred HHHHHHHHHHhhcchHHHHHHHHhccHHHHHHHHHhc---ChHHHHHHHHHHHHHHhccccccchhCCHHHHHHHHHHHc
Confidence 345555665 666788889999999999999999987 7889999999999996654556666666667888888887
Q ss_pred hCCHHHHHHHHHHHHHhhcCC
Q 032259 88 RGSQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 88 ~Gt~raK~kA~~lL~~L~~~~ 108 (144)
+-....-+.|-++|..|-...
T Consensus 213 s~~~~V~k~AL~LL~v~V~~s 233 (339)
T 3dad_A 213 SLSRLVVKTALKLLLVFVEYS 233 (339)
T ss_dssp CSCHHHHHHHHHHHHHHHHHC
T ss_pred CccHHHHHHHHHHHHHHHccC
Confidence 656666677777877776654
No 59
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=87.05 E-value=0.61 Score=37.23 Aligned_cols=94 Identities=19% Similarity=0.152 Sum_probs=64.8
Q ss_pred hHHHHHHHHHHhcCChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccCh--HHHHHHHHcCcHHHHHH
Q 032259 7 STSRVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNL--RFKGLAKEARAAEVLRE 84 (144)
Q Consensus 7 ~~E~AlavL~~La~~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~--~~~~~a~~~Gai~~L~~ 84 (144)
....|...|..|+..-. ..+. ...+|.+.+.|.+. .++.|+.|+.+|..++.+.. ..... -..++|.|+.
T Consensus 344 ~r~~a~~~L~~l~~~~~--~~~~-~~~~~~l~~~l~~~---~~~~r~aal~~l~~l~~~~~~~~~~~~--l~~~~~~l~~ 415 (462)
T 1ibr_B 344 PCKAAGVCLMLLATCCE--DDIV-PHVLPFIKEHIKNP---DWRYRDAAVMAFGCILEGPEPSQLKPL--VIQAMPTLIE 415 (462)
T ss_dssp HHHHHHHHHHHHHHHTT--TTHH-HHHHHHHHHHTTCS---SHHHHHHHHHHHHHTSSSSCTTTTCTT--TTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcc--HHHH-HHHHHHHHHHhcCC---ChHHHHHHHHHHHHHhcCCcHHHHHHH--HHHHHHHHHH
Confidence 44555666666654211 1122 13456666677654 78999999999999997432 11111 2668999999
Q ss_pred HHHhCCHHHHHHHHHHHHHhhcCC
Q 032259 85 VEERGSQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 85 Ll~~Gt~raK~kA~~lL~~L~~~~ 108 (144)
++.+..++.|..|..+|..+....
T Consensus 416 ~l~d~~~~Vr~~a~~~l~~~~~~~ 439 (462)
T 1ibr_B 416 LMKDPSVVVRDTAAWTVGRICELL 439 (462)
T ss_dssp GGGCSCHHHHHHHHHHHHHHHHHG
T ss_pred HhcCCCHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999988764
No 60
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=84.91 E-value=4.3 Score=33.34 Aligned_cols=67 Identities=15% Similarity=0.133 Sum_probs=45.3
Q ss_pred cHHHHHHHhhcCCCCChHHHHHHHHHHHHHhcc-ChHHHHHHHHcCcHHHHHHHHHhCCHHHHHHHHHHHHHhhc
Q 032259 33 GVSILVGMLKESGSDSEATRENCVAALFALGHG-NLRFKGLAKEARAAEVLREVEERGSQRAKEKAKRILGMLKG 106 (144)
Q Consensus 33 ~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~-~~~~~~~a~~~Gai~~L~~Ll~~Gt~raK~kA~~lL~~L~~ 106 (144)
.+|.|++.+.+. .+.-|.+++.+|..++.. .... ...-++|.|..++.+..+..|+.|..+|..+.+
T Consensus 520 ~~~~l~~~l~d~---~~~Vr~~a~~~l~~l~~~~~~~~----~~~~~~p~l~~l~~d~d~~vr~~a~~al~~l~~ 587 (588)
T 1b3u_A 520 MLPTVLRMAGDP---VANVRFNVAKSLQKIGPILDNST----LQSEVKPILEKLTQDQDVDVKYFAQEALTVLSL 587 (588)
T ss_dssp THHHHHHGGGCS---CHHHHHHHHHHHHHHGGGSCHHH----HHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhhCCCC---CchHHHHHHHHHHHHHHHhchhh----hHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhc
Confidence 566677777664 577788888888888762 1211 124566777777777788888888888877653
No 61
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=84.22 E-value=2.2 Score=35.12 Aligned_cols=70 Identities=10% Similarity=0.112 Sum_probs=45.3
Q ss_pred CcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccC-hHHHHHHHHcCcHHHHHHHHHhCCHHHHHHHHHHHHHh
Q 032259 32 NGVSILVGMLKESGSDSEATRENCVAALFALGHGN-LRFKGLAKEARAAEVLREVEERGSQRAKEKAKRILGML 104 (144)
Q Consensus 32 g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~-~~~~~~a~~~Gai~~L~~Ll~~Gt~raK~kA~~lL~~L 104 (144)
..+|.+++++.+. .+..|+.|+..|-.++..- +..+.......++|.|..++.+.++..|+.|...|..+
T Consensus 281 ~l~~~l~~~l~d~---~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~l~d~~~~vR~~a~~~l~~l 351 (588)
T 1b3u_A 281 DLVPAFQNLMKDC---EAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGL 351 (588)
T ss_dssp THHHHHHHHHTCS---SHHHHHHHHHHHHHHHHTSCTTTHHHHHHHTHHHHHHHHHTCSCHHHHHHHHTTGGGG
T ss_pred HHHHHHHHHhCCC---cHHHHHHHHHHHHHHHHHhChhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 3577888888764 6888999999998888622 12111112345667777777777777777665544433
No 62
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=82.94 E-value=2.3 Score=37.62 Aligned_cols=95 Identities=13% Similarity=-0.001 Sum_probs=68.2
Q ss_pred chHHHHHHHHHHhcCChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHH
Q 032259 6 ESTSRVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLREV 85 (144)
Q Consensus 6 ~~~E~AlavL~~La~~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~L 85 (144)
.+...|...|..|+.... ..+.. ..+|.+.+.+.+. +++.|+-|+.+|..++.+....-. ..-..++|.|+.+
T Consensus 336 ~vr~~a~~~L~~la~~~~--~~~~~-~l~~~l~~~l~~~---~~~~R~aa~~alg~i~~~~~~~~~-~~l~~~l~~l~~~ 408 (852)
T 4fdd_A 336 NLRKCSAAALDVLANVYR--DELLP-HILPLLKELLFHH---EWVVKESGILVLGAIAEGCMQGMI-PYLPELIPHLIQC 408 (852)
T ss_dssp CHHHHHHHHHHHHHHHHG--GGGHH-HHHHHHHHHHTCS---SHHHHHHHHHHHHHTTTTTHHHHG-GGHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcc--HHHHH-HHHHHHHHHhcCC---CHHHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHHHHH
Confidence 345667777887775332 12222 3567777777764 799999999999999985542111 1235678999999
Q ss_pred HHhCCHHHHHHHHHHHHHhhcC
Q 032259 86 EERGSQRAKEKAKRILGMLKGR 107 (144)
Q Consensus 86 l~~Gt~raK~kA~~lL~~L~~~ 107 (144)
+.+..+..|..|...|..+...
T Consensus 409 l~d~~~~Vr~~a~~~l~~l~~~ 430 (852)
T 4fdd_A 409 LSDKKALVRSITCWTLSRYAHW 430 (852)
T ss_dssp TTCSSHHHHHHHHHHHHHTHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999887764
No 63
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=81.13 E-value=2.7 Score=36.53 Aligned_cols=97 Identities=9% Similarity=0.030 Sum_probs=65.7
Q ss_pred chHHHHHHHHHHhcCCh--hhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHH-HHHHHcCcHHHH
Q 032259 6 ESTSRVLLILCNLAASN--EGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFK-GLAKEARAAEVL 82 (144)
Q Consensus 6 ~~~E~AlavL~~La~~~--egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~-~~a~~~Gai~~L 82 (144)
...+.|+..|..++... +...... ...+|.|+..|.+. ++.-|+.|+.+|..+|...+... ..-.-..+++.|
T Consensus 381 ~~r~~a~~~l~~i~~~~~~~~~~~~~-~~~l~~l~~~l~d~---~~~vr~~a~~~l~~~~~~~~~~~~~~~~l~~~l~~l 456 (876)
T 1qgr_A 381 RYRDAAVMAFGCILEGPEPSQLKPLV-IQAMPTLIELMKDP---SVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCL 456 (876)
T ss_dssp HHHHHHHHHHHHTSSSSCHHHHHHHH-HHHHHHHHHHHTCS---SHHHHHHHHHHHHHHHHHCGGGTSSTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHH-HHHHHHHHHHhCCC---CHHHHHHHHHHHHHHHHhCchhcccHHHHHHHHHHH
Confidence 46788888888888632 3222222 24688899999875 78899999999999997322100 000123467788
Q ss_pred HHHHHhCCHHHHHHHHHHHHHhhcC
Q 032259 83 REVEERGSQRAKEKAKRILGMLKGR 107 (144)
Q Consensus 83 ~~Ll~~Gt~raK~kA~~lL~~L~~~ 107 (144)
+..+.+. ++.|..|..+|..|...
T Consensus 457 ~~~l~~~-~~v~~~a~~al~~l~~~ 480 (876)
T 1qgr_A 457 IEGLSAE-PRVASNVCWAFSSLAEA 480 (876)
T ss_dssp HHHTTSC-HHHHHHHHHHHHHHHHH
T ss_pred HHHHcCC-HHHHHHHHHHHHHHHHH
Confidence 8887774 88888888888877654
No 64
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=80.54 E-value=6 Score=34.33 Aligned_cols=71 Identities=17% Similarity=0.114 Sum_probs=53.4
Q ss_pred cHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccCh--HHHHHHHHcCcHHHHHHHHHhCCHHHHHHHHHHHHHhhcCC
Q 032259 33 GVSILVGMLKESGSDSEATRENCVAALFALGHGNL--RFKGLAKEARAAEVLREVEERGSQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 33 ~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~--~~~~~a~~~Gai~~L~~Ll~~Gt~raK~kA~~lL~~L~~~~ 108 (144)
.+|.+...+.+. +++.|+.|+.+|..++.+.. .... .-..++|.|+..+.+..+..|..|..+|..+....
T Consensus 367 ~l~~l~~~l~~~---~~~~r~~a~~~l~~i~~~~~~~~~~~--~~~~~l~~l~~~l~d~~~~vr~~a~~~l~~~~~~~ 439 (876)
T 1qgr_A 367 VLPFIKEHIKNP---DWRYRDAAVMAFGCILEGPEPSQLKP--LVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELL 439 (876)
T ss_dssp HHHHHHHHTTCS---SHHHHHHHHHHHHHTSSSSCHHHHHH--HHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHccCC---ChHHHHHHHHHHHHHHcCCCHHHHHH--HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhC
Confidence 345555556553 78999999999999987432 2222 23558999999999889999999999999888764
No 65
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=77.54 E-value=11 Score=28.80 Aligned_cols=100 Identities=8% Similarity=0.010 Sum_probs=65.3
Q ss_pred cchHHHHHHHHHHhcCChhhHHHHH--hcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHH-HHHH-HH-cCcH
Q 032259 5 GESTSRVLLILCNLAASNEGRSAIL--DANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRF-KGLA-KE-ARAA 79 (144)
Q Consensus 5 ~~~~E~AlavL~~La~~~egr~aI~--~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~-~~~a-~~-~Gai 79 (144)
..+.+.+...|..++.+-+- .... =...++.|...|... ++..|+.++..|-.++...... .... .- .-++
T Consensus 118 ~~V~~aa~~al~~i~~~~~~-~~~~~~l~~ll~~l~~~l~~k---~~~vk~~al~~l~~~~~~~~~~~~~l~~~l~~~ii 193 (249)
T 2qk1_A 118 PSVIEAIRKALLTICKYYDP-LASSGRNEDMLKDILEHMKHK---TPQIRMECTQLFNASMKEEKDGYSTLQRYLKDEVV 193 (249)
T ss_dssp HHHHHHHHHHHHHHHHHSCT-TCTTCTTHHHHHHHHHHTTCS---SHHHHHHHHHHHHHHHHHCCSCSHHHHHHHTTTHH
T ss_pred HHHHHHHHHHHHHHHHHccc-cccCCcHHHHHHHHHHHHcCC---ChHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHH
Confidence 34556666666666541100 0000 001455667777664 7899999999999998733210 1222 23 6789
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhhcCC
Q 032259 80 EVLREVEERGSQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 80 ~~L~~Ll~~Gt~raK~kA~~lL~~L~~~~ 108 (144)
|.|..++.+..+..|+.|...|-.+.+.-
T Consensus 194 p~l~~~l~D~~~~VR~aA~~~l~~i~~~v 222 (249)
T 2qk1_A 194 PIVIQIVNDTQPAIRTIGFESFAILIKIF 222 (249)
T ss_dssp HHHHHHHTCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998887654
No 66
>3ldz_A STAM-1, signal transducing adapter molecule 1; ubiquitin-binding, cytoplasm, UBL conjugation, endosome, membrane, protein transport, SH3 domain; 2.60A {Homo sapiens} SCOP: a.118.9.0
Probab=75.21 E-value=10 Score=27.02 Aligned_cols=76 Identities=13% Similarity=0.055 Sum_probs=53.8
Q ss_pred cHHHHHHHhhcCCCCChHHHHHHHHHHHHHhc-cChHHHHHHHHcCcHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCCCC
Q 032259 33 GVSILVGMLKESGSDSEATRENCVAALFALGH-GNLRFKGLAKEARAAEVLREVEERGSQRAKEKAKRILGMLKGREDDD 111 (144)
Q Consensus 33 ~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~-~~~~~~~~a~~~Gai~~L~~Ll~~Gt~raK~kA~~lL~~L~~~~~~~ 111 (144)
++..|.+.|..+ ++..+-.|..+|-.+.. ....+...+.....+.-|+.++..-.+..|+|...+++.......++
T Consensus 43 a~rai~Krl~~~---n~~~ql~AL~LLe~~vkNcG~~f~~evas~~Fl~el~~l~~~~~~~Vk~kil~li~~W~~~f~~~ 119 (140)
T 3ldz_A 43 CLRSIMRRVNHK---DPHVAMQALTLLGACVSNCGKIFHLEVCSRDFASEVSNVLNKGHPKVCEKLKALMVEWTDEFKND 119 (140)
T ss_dssp HHHHHHHHHTCS---SHHHHHHHHHHHHHHHHHSCHHHHHHHSSHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC---ChHHHHHHHHHHHHHHHhcCHHHHHHHhhHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhCCC
Confidence 566788888776 78888888776655544 44555655555557777888887778899999888888766544333
No 67
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=72.25 E-value=5.8 Score=30.45 Aligned_cols=96 Identities=9% Similarity=0.031 Sum_probs=64.2
Q ss_pred hHHHHHHHHHHhcCChhhH-HHHH-hc--CcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhc-cChHHHHHHHHcCcHHH
Q 032259 7 STSRVLLILCNLAASNEGR-SAIL-DA--NGVSILVGMLKESGSDSEATRENCVAALFALGH-GNLRFKGLAKEARAAEV 81 (144)
Q Consensus 7 ~~E~AlavL~~La~~~egr-~aI~-~~--g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~-~~~~~~~~a~~~Gai~~ 81 (144)
+++.|+.+|..|+..- + ..+. .. -.+|.|++.+.+. .+.-++.|..+|..+|. .++.. ..---.-+++.
T Consensus 77 v~~~A~~al~~la~~l--~~~~f~~~y~~~llp~ll~~l~dk---k~~V~~aa~~al~~i~~~~~~~~-~~~~l~~ll~~ 150 (249)
T 2qk1_A 77 AVALAAQSVELICDKL--KTPGFSKDYVSLVFTPLLDRTKEK---KPSVIEAIRKALLTICKYYDPLA-SSGRNEDMLKD 150 (249)
T ss_dssp HHHHHHHHHHHHHHHH--CTTTSCHHHHHHHHHHHHHGGGCC---CHHHHHHHHHHHHHHHHHSCTTC-TTCTTHHHHHH
T ss_pred HHHHHHHHHHHHHHhc--ccccccHHHHHHHHHHHHHHHcCC---CHHHHHHHHHHHHHHHHHccccc-cCCcHHHHHHH
Confidence 5678888888888311 1 1232 21 2578999999874 58889999999999987 32210 00001126778
Q ss_pred HHHHHHhCCHHHHHHHHHHHHHhhcCC
Q 032259 82 LREVEERGSQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 82 L~~Ll~~Gt~raK~kA~~lL~~L~~~~ 108 (144)
|...+++..+..|+-+...|..+-...
T Consensus 151 l~~~l~~k~~~vk~~al~~l~~~~~~~ 177 (249)
T 2qk1_A 151 ILEHMKHKTPQIRMECTQLFNASMKEE 177 (249)
T ss_dssp HHHHTTCSSHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCChHHHHHHHHHHHHHHHHc
Confidence 888888889999998887777666554
No 68
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=71.78 E-value=15 Score=26.61 Aligned_cols=78 Identities=15% Similarity=0.092 Sum_probs=56.2
Q ss_pred cHHHHHHHhhcCCCCChHHHHHHHHHHHHHhc-cChHHHHHHHHcCcHHHHHHHHHh------CCHHHHHHHHHHHHHhh
Q 032259 33 GVSILVGMLKESGSDSEATRENCVAALFALGH-GNLRFKGLAKEARAAEVLREVEER------GSQRAKEKAKRILGMLK 105 (144)
Q Consensus 33 ~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~-~~~~~~~~a~~~Gai~~L~~Ll~~------Gt~raK~kA~~lL~~L~ 105 (144)
++..|.+.|..+ ++..+-.|..+|-.+.. ....+...+.....+.-|+.++.. -.+..|+|...+++...
T Consensus 49 a~ral~krl~~~---n~~v~l~AL~LLe~cvkNCG~~fh~eias~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~ 125 (149)
T 3g2s_A 49 ATRLLAHKIQSP---QEWEAIQALTVLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWT 125 (149)
T ss_dssp HHHHHHHHHTCS---SHHHHHHHHHHHHHHHHHCCHHHHHHHTSHHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCC---CHHHHHHHHHHHHHHHHhcCHHHHHHHhhHHHHHHHHHHHcccccCCCCCHHHHHHHHHHHHHHH
Confidence 566788888765 78889888887777655 445565655566677888888853 36788999888888877
Q ss_pred cCCCCCCc
Q 032259 106 GREDDDED 113 (144)
Q Consensus 106 ~~~~~~~~ 113 (144)
....+++.
T Consensus 126 ~~f~~~p~ 133 (149)
T 3g2s_A 126 VGLPEEVK 133 (149)
T ss_dssp HHCTTCHH
T ss_pred HHhCCCch
Confidence 65545544
No 69
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=71.62 E-value=21 Score=26.13 Aligned_cols=77 Identities=13% Similarity=0.018 Sum_probs=55.2
Q ss_pred cHHHHHHHhhcCCCCChHHHHHHHHHHHHHhc-cChHHHHHHHHcCcHHHHHHHHHh-CCHHHHHHHHHHHHHhhcCCCC
Q 032259 33 GVSILVGMLKESGSDSEATRENCVAALFALGH-GNLRFKGLAKEARAAEVLREVEER-GSQRAKEKAKRILGMLKGREDD 110 (144)
Q Consensus 33 ~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~-~~~~~~~~a~~~Gai~~L~~Ll~~-Gt~raK~kA~~lL~~L~~~~~~ 110 (144)
++..|.+.|..+ ++..+-.|..+|-.+.. +...+...+.....+.-|+.|+.. -.+..|+|+..+|+.......+
T Consensus 53 A~ral~krl~~~---n~~vql~AL~LLd~~vkNcG~~Fh~evas~~Fl~el~~l~~~~~~~~Vk~kil~li~~W~~~f~~ 129 (163)
T 1x5b_A 53 CLKAIMKRVNHK---VPHVALQALTLLGACVANCGKIFHLEVCSRDFATEVRAVIKNKAHPKVCEKLKSLMVEWSEEFQK 129 (163)
T ss_dssp HHHHHHHHHTCS---SHHHHHHHHHHHHHHHHHTCHHHHHHHTSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHcCC---CHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHhcC
Confidence 566788888776 68888777776666655 445667666666678888888864 3589999998888887765434
Q ss_pred CC
Q 032259 111 DE 112 (144)
Q Consensus 111 ~~ 112 (144)
++
T Consensus 130 ~~ 131 (163)
T 1x5b_A 130 DP 131 (163)
T ss_dssp CS
T ss_pred Cc
Confidence 43
No 70
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=70.01 E-value=19 Score=33.92 Aligned_cols=73 Identities=12% Similarity=0.025 Sum_probs=50.0
Q ss_pred HHHHHhhcCC-CCChHHHHHHHHHHHHHhc-cChHHHHHHHHcCcHHHHHHHHHh-CCHHHHHHHHHHHHHhhcCC
Q 032259 36 ILVGMLKESG-SDSEATRENCVAALFALGH-GNLRFKGLAKEARAAEVLREVEER-GSQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 36 ~LV~lL~~G~-~~S~~~kE~Ava~L~~Lc~-~~~~~~~~a~~~Gai~~L~~Ll~~-Gt~raK~kA~~lL~~L~~~~ 108 (144)
.+|.+|..|- .-+...|..++.+.-|||. .++.....---+-++|.|...... .-|.+|+.|..++..|.+..
T Consensus 251 ~~~p~l~r~l~~~~~~~~r~~~~~~~n~~~lv~~~~~~~~f~~~l~p~~~~~~~~~~~pe~r~~~~~a~~~l~~~~ 326 (986)
T 2iw3_A 251 IMVPLLSRGLNERETGIKRKSAVIIDNMCKLVEDPQVIAPFLGKLLPGLKSNFATIADPEAREVTLRALKTLRRVG 326 (986)
T ss_dssp HHHHHHHHHHTSSSHHHHHHHHHHHHHHHTTCCCHHHHHHHHTTTHHHHHHHTTTCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhccCcchhheeeEEEEcchhhhcCCHHHHhhhhhhhhhHHHHHhhccCCHHHHHHHHHHHHHHHHhh
Confidence 4445554331 0155678899999999999 333323333356778888777655 47999999999999998764
No 71
>1ho8_A Vacuolar ATP synthase subunit H; heat repeat, hydrolase; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9
Probab=69.39 E-value=39 Score=29.23 Aligned_cols=96 Identities=13% Similarity=0.001 Sum_probs=58.5
Q ss_pred HHHHHHHHHhcCChhhHHHHHhcC--cHHHHHHHhhc---CCC-----------CChHHHHHHHHHHHHHhccChHHHHH
Q 032259 9 SRVLLILCNLAASNEGRSAILDAN--GVSILVGMLKE---SGS-----------DSEATRENCVAALFALGHGNLRFKGL 72 (144)
Q Consensus 9 E~AlavL~~La~~~egr~aI~~~g--~I~~LV~lL~~---G~~-----------~S~~~kE~Ava~L~~Lc~~~~~~~~~ 72 (144)
.-++..|..|...++.|..+.+++ .+|+++++++. |.. ....-+=+++-++|.|+...+.. ..
T Consensus 186 ~i~v~~L~~Ll~~~~~R~~f~~~~~~~~~~l~~il~~~~~~~~~~~~~~~~~~~~~~Ql~Y~~ll~iWlLSF~~~~~-~~ 264 (480)
T 1ho8_A 186 YVCIRLLQELAVIPEYRDVIWLHEKKFMPTLFKILQRATDSQLATRIVATNSNHLGIQLQYHSLLLIWLLTFNPVFA-NE 264 (480)
T ss_dssp HHHHHHHHHHHTSHHHHHHHHTTHHHHHHHHHHHHHHHHC-------------CCHHHHHHHHHHHHHHHTTSHHHH-HH
T ss_pred HHHHHHHHHHhcchhHHHHHHHcccchhHHHHHHHHHhhccccccccccccCCCccHHHHHHHHHHHHHHHcCHHHH-HH
Confidence 457788888899999999997653 48888877653 100 11233788899999999765433 33
Q ss_pred HHHcCcH--HHHHHHHHhC-CHHHHHHHHHHHHHhh
Q 032259 73 AKEARAA--EVLREVEERG-SQRAKEKAKRILGMLK 105 (144)
Q Consensus 73 a~~~Gai--~~L~~Ll~~G-t~raK~kA~~lL~~L~ 105 (144)
....+++ +.|+.+++.- -++.-|-+-.+|++|-
T Consensus 265 l~~~~i~~~~~L~~i~k~s~KEKvvRv~la~l~Nll 300 (480)
T 1ho8_A 265 LVQKYLSDFLDLLKLVKITIKEKVSRLCISIILQCC 300 (480)
T ss_dssp HHTTSHHHHHHHHHHHHHCCSHHHHHHHHHHHHHTT
T ss_pred HHhcchHHHHHHHHHHHhhccchhHHHHHHHHHHHh
Confidence 3344543 6666666553 2333344444444433
No 72
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=68.95 E-value=12 Score=32.59 Aligned_cols=88 Identities=9% Similarity=0.088 Sum_probs=62.5
Q ss_pred hHHHHHHHHHHhcCChhhHHHHHhcCcHHHHHHHh--hcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHH
Q 032259 7 STSRVLLILCNLAASNEGRSAILDANGVSILVGML--KESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLRE 84 (144)
Q Consensus 7 ~~E~AlavL~~La~~~egr~aI~~~g~I~~LV~lL--~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~ 84 (144)
+.-.|+..|+++.. ++ +.+ .-+|.+.+.| .+. +|--|..|+-++..++..++... ...+.++.|..
T Consensus 127 ir~lALr~L~~i~~-~e----~~~-~l~~~v~~~l~~~d~---~~~VRK~A~~al~kl~~~~p~~~---~~~~~~~~l~~ 194 (621)
T 2vgl_A 127 FMGLALHCIANVGS-RE----MAE-AFAGEIPKILVAGDT---MDSVKQSAALCLLRLYRTSPDLV---PMGDWTSRVVH 194 (621)
T ss_dssp HHHHHHHHHHHHCC-HH----HHH-HHTTHHHHHHHCSSS---CHHHHHHHHHHHHHHHHHCGGGC---CCCSCHHHHHH
T ss_pred HHHHHHHHhhccCC-HH----HHH-HHHHHHHHHHhCCCC---CHHHHHHHHHHHHHHHHhChhhc---CchhHHHHHHH
Confidence 34567888888865 44 322 2346788888 443 79999999999999998544311 12478889999
Q ss_pred HHHhCCHHHHHHHHHHHHHhhc
Q 032259 85 VEERGSQRAKEKAKRILGMLKG 106 (144)
Q Consensus 85 Ll~~Gt~raK~kA~~lL~~L~~ 106 (144)
++.+..+..+..|..+|.-+..
T Consensus 195 lL~d~d~~V~~~a~~~l~~i~~ 216 (621)
T 2vgl_A 195 LLNDQHLGVVTAATSLITTLAQ 216 (621)
T ss_dssp HTTCSCHHHHHHHHHHHHHHHH
T ss_pred HhCCCCccHHHHHHHHHHHHHH
Confidence 8877788888888777766654
No 73
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=68.87 E-value=12 Score=32.43 Aligned_cols=87 Identities=9% Similarity=0.014 Sum_probs=58.1
Q ss_pred chHHHHHHHHHHhcCChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHH
Q 032259 6 ESTSRVLLILCNLAASNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLREV 85 (144)
Q Consensus 6 ~~~E~AlavL~~La~~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~L 85 (144)
.+...|+..|+++.. ++ +.+ ..++.+.+.|.+. ++.-|..|+.+|..++..++... .+.++.|..+
T Consensus 122 ~vr~lAL~~L~~i~~-~~----~~~-~l~~~l~~~L~~~---~~~VRk~A~~al~~l~~~~p~~v-----~~~~~~l~~l 187 (618)
T 1w63_A 122 FVQGLALCTLGCMGS-SE----MCR-DLAGEVEKLLKTS---NSYLRKKAALCAVHVIRKVPELM-----EMFLPATKNL 187 (618)
T ss_dssp HHHHHHHHHHHHHCC-HH----HHH-HHHHHHHHHHHSC---CHHHHHHHHHHHHHHHHHCGGGG-----GGGGGGTTTS
T ss_pred hHHHHHHHHHHhcCC-HH----HHH-HHHHHHHHHHcCC---CHHHHHHHHHHHHHHHHHChHHH-----HHHHHHHHHH
Confidence 345677888888874 32 222 3467888888875 79999999999999988554311 2456666666
Q ss_pred HHhCCHHHHHHHHHHHHHhhc
Q 032259 86 EERGSQRAKEKAKRILGMLKG 106 (144)
Q Consensus 86 l~~Gt~raK~kA~~lL~~L~~ 106 (144)
+.+..+..+..|..+|..+..
T Consensus 188 L~D~d~~V~~~Al~~L~~i~~ 208 (618)
T 1w63_A 188 LNEKNHGVLHTSVVLLTEMCE 208 (618)
T ss_dssp TTCCCHHHHHHHHHHHHHHCC
T ss_pred hCCCCHhHHHHHHHHHHHHHH
Confidence 666666666666666655543
No 74
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=68.65 E-value=8.5 Score=30.42 Aligned_cols=71 Identities=13% Similarity=0.064 Sum_probs=51.2
Q ss_pred CcHHHHHHHhhcCCCC-ChHHHHHHHHHHHHHhccC-hH-HHHHHHHcCcHHHHHHHHHhC--CHHHHHHHHHHHHHhhc
Q 032259 32 NGVSILVGMLKESGSD-SEATRENCVAALFALGHGN-LR-FKGLAKEARAAEVLREVEERG--SQRAKEKAKRILGMLKG 106 (144)
Q Consensus 32 g~I~~LV~lL~~G~~~-S~~~kE~Ava~L~~Lc~~~-~~-~~~~a~~~Gai~~L~~Ll~~G--t~raK~kA~~lL~~L~~ 106 (144)
..+|.|++.+.++ . ++..++.|+.+|..+|... .. .... ...+++.|+.++.+. ++..|..|...|..+-.
T Consensus 128 ~ll~~L~~~l~~~--~~~~~~r~~al~~l~~l~~~~~~~~~~~~--~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~ 203 (462)
T 1ibr_B 128 ELIPQLVANVTNP--NSTEHMKESTLEAIGYICQDIDPEQLQDK--SNEILTAIIQGMRKEEPSNNVKLAATNALLNSLE 203 (462)
T ss_dssp THHHHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHSCGGGTGGG--HHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhccC--CCCHHHHHHHHHHHHHHHHhCCchhhHhH--HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Confidence 4688899999774 1 5788999999999999732 21 1111 134788888888887 68888888888876543
No 75
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=66.18 E-value=14 Score=31.83 Aligned_cols=97 Identities=4% Similarity=0.033 Sum_probs=61.9
Q ss_pred chHHHHHHHHHHhcCCh--hhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccC-hHHHHHHHHcCcHHHH
Q 032259 6 ESTSRVLLILCNLAASN--EGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGN-LRFKGLAKEARAAEVL 82 (144)
Q Consensus 6 ~~~E~AlavL~~La~~~--egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~-~~~~~~a~~~Gai~~L 82 (144)
...+.|+..|..++... +.-..... ..+|.|++.+.+. ++.-|+.|+-+|-.+|..- +.....-.-..++|.|
T Consensus 384 ~~r~~a~~~l~~i~~~~~~~~~~~~l~-~il~~l~~~l~d~---~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~l~~l 459 (861)
T 2bpt_A 384 RNREAAVMAFGSIMDGPDKVQRTYYVH-QALPSILNLMNDQ---SLQVKETTAWCIGRIADSVAESIDPQQHLPGVVQAC 459 (861)
T ss_dssp HHHHHHHHHHHHTSSSSCHHHHHHHHH-HHHHHHHHGGGCS---CHHHHHHHHHHHHHHHHHHGGGSCTTTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCCHHHHHHHHH-HHHHHHHHHcCCC---cHHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHH
Confidence 35677888888888532 22222222 3577888888764 7888998888888887521 1000000123467888
Q ss_pred HHHHHhCCHHHHHHHHHHHHHhhcC
Q 032259 83 REVEERGSQRAKEKAKRILGMLKGR 107 (144)
Q Consensus 83 ~~Ll~~Gt~raK~kA~~lL~~L~~~ 107 (144)
+..+.+. ++.+..|..+|..|.+.
T Consensus 460 ~~~l~~~-~~v~~~a~~al~~l~~~ 483 (861)
T 2bpt_A 460 LIGLQDH-PKVATNCSWTIINLVEQ 483 (861)
T ss_dssp HHHHTSC-HHHHHHHHHHHHHHHHH
T ss_pred HHHhccC-hHHHHHHHHHHHHHHHh
Confidence 8888765 88888888888776654
No 76
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=64.35 E-value=24 Score=27.03 Aligned_cols=76 Identities=7% Similarity=0.078 Sum_probs=54.2
Q ss_pred cHHHHHHHhhcCCCCChHHHHHHHHHHHHHhc-cChHHHHHHHHcCcHHHHHHHHHhC-CHHHHHHHHHHHHHhhcCCCC
Q 032259 33 GVSILVGMLKESGSDSEATRENCVAALFALGH-GNLRFKGLAKEARAAEVLREVEERG-SQRAKEKAKRILGMLKGREDD 110 (144)
Q Consensus 33 ~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~-~~~~~~~~a~~~Gai~~L~~Ll~~G-t~raK~kA~~lL~~L~~~~~~ 110 (144)
++..|.+.|..+ ++..+-.|+.+|-.+.. ....+...+.....+..|..|+..- .+..|+|...+|+.......+
T Consensus 46 a~ral~krl~~~---n~~v~l~aL~LLe~~vkNcG~~f~~eias~~fl~~l~~l~~~~~~~~Vk~kil~li~~W~~~f~~ 122 (226)
T 3zyq_A 46 AVNSIKKKVNDK---NPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKRQVEVNVRNKILYLIQAWAHAFRN 122 (226)
T ss_dssp HHHHHHHHHTCS---SHHHHHHHHHHHHHHHHHHCHHHHHHHSSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHcCC---CHHHHHHHHHHHHHHHHhcchHHHHhhccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhCC
Confidence 566788888765 78889999887777765 3344555555555667788887654 578899998888887765434
Q ss_pred C
Q 032259 111 D 111 (144)
Q Consensus 111 ~ 111 (144)
+
T Consensus 123 ~ 123 (226)
T 3zyq_A 123 E 123 (226)
T ss_dssp C
T ss_pred C
Confidence 4
No 77
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=62.49 E-value=22 Score=30.67 Aligned_cols=69 Identities=14% Similarity=0.141 Sum_probs=48.8
Q ss_pred HHHHHHHhhcCCCCChHHHHHHHHHHHHHhccC--hHHHHHHHHcCcHHHHHHHHHhCCHHHHHHHHHHHHHhhcC
Q 032259 34 VSILVGMLKESGSDSEATRENCVAALFALGHGN--LRFKGLAKEARAAEVLREVEERGSQRAKEKAKRILGMLKGR 107 (144)
Q Consensus 34 I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~--~~~~~~a~~~Gai~~L~~Ll~~Gt~raK~kA~~lL~~L~~~ 107 (144)
++.+.+.+.+. +++.|+-|+.+|..++.+. ...... -..++|.|+..+.+..+..|..|..+|..+...
T Consensus 371 ~~~l~~~l~~~---~~~~r~~a~~~l~~i~~~~~~~~~~~~--l~~il~~l~~~l~d~~~~vr~~a~~~l~~l~~~ 441 (861)
T 2bpt_A 371 LEFVEQNITAD---NWRNREAAVMAFGSIMDGPDKVQRTYY--VHQALPSILNLMNDQSLQVKETTAWCIGRIADS 441 (861)
T ss_dssp HHHHHHHTTCS---SHHHHHHHHHHHHHTSSSSCHHHHHHH--HHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCC---ChhHHHHHHHHHHHHHcCCCHHHHHHH--HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHH
Confidence 34444555553 6889999999999998743 222222 235788888888888999999888877766654
No 78
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=60.65 E-value=16 Score=31.46 Aligned_cols=90 Identities=11% Similarity=0.066 Sum_probs=57.6
Q ss_pred HHHHHHHHHHhcC-ChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHHH
Q 032259 8 TSRVLLILCNLAA-SNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLREVE 86 (144)
Q Consensus 8 ~E~AlavL~~La~-~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~Ll 86 (144)
.-.|+..|.+|.. +|+-. ...++.|.++|.+. .+.-+-+|+.+|..+|..++.... .-...+|.|+.++
T Consensus 159 Rk~A~~al~~l~~~~p~~v-----~~~~~~l~~lL~D~---d~~V~~~Al~~L~~i~~~~~~~~~--~~~~~v~~l~~~L 228 (618)
T 1w63_A 159 RKKAALCAVHVIRKVPELM-----EMFLPATKNLLNEK---NHGVLHTSVVLLTEMCERSPDMLA--HFRKLVPQLVRIL 228 (618)
T ss_dssp HHHHHHHHHHHHHHCGGGG-----GGGGGGTTTSTTCC---CHHHHHHHHHHHHHHCCSHHHHHH--HHHTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHChHHH-----HHHHHHHHHHhCCC---CHhHHHHHHHHHHHHHHhChHHHH--HHHHHHHHHHHHH
Confidence 3445555555543 33321 13556666777664 688999999999999986543211 1235788888877
Q ss_pred Hh---------------CCHHHHHHHHHHHHHhhcC
Q 032259 87 ER---------------GSQRAKEKAKRILGMLKGR 107 (144)
Q Consensus 87 ~~---------------Gt~raK~kA~~lL~~L~~~ 107 (144)
.+ .+|..+-+...+|..+...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~q~~il~~L~~l~~~ 264 (618)
T 1w63_A 229 KNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRN 264 (618)
T ss_dssp HHHHHSCCCTTTCSSSSSCHHHHHHHHHHHHHHTTT
T ss_pred HHHHcCCCCccccccCCCCChHHHHHHHHHHHhCCC
Confidence 64 2788888877777666543
No 79
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=59.80 E-value=32 Score=25.92 Aligned_cols=73 Identities=5% Similarity=0.013 Sum_probs=54.0
Q ss_pred cHHHHHHHhhcCCCCChHHHHHHHHHHHHHhcc-ChHHHHHHHHcCcHHHHHHHHHhC-CHHHHHHHHHHHHHhhcCC
Q 032259 33 GVSILVGMLKESGSDSEATRENCVAALFALGHG-NLRFKGLAKEARAAEVLREVEERG-SQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 33 ~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~-~~~~~~~a~~~Gai~~L~~Ll~~G-t~raK~kA~~lL~~L~~~~ 108 (144)
++..|.+.|..+ ++..+-.|..+|-.+..+ ...+...+.....+.-|+.++.+. .+..|+|+..+++......
T Consensus 43 a~r~l~krl~~~---n~~~~l~aL~Lle~~vkNcG~~f~~eva~~~fl~~l~~l~~~~~~~~Vk~kil~li~~W~~~f 117 (220)
T 1dvp_A 43 AFAAIKKKMNSP---NPHSSCYSLLVLESIVKNCGAPVHEEVFTKENCEMFSSFLESTPHENVRQKMLELVQTWAYAF 117 (220)
T ss_dssp HHHHHHHHHTCS---SHHHHHHHHHHHHHHHHHSHHHHHHHHSSHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCC---CHHHHHHHHHHHHHHHhccCHHHHHHHHhHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHh
Confidence 456777888776 788899999888887763 345555555555888888888765 5788999888888777544
No 80
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=58.58 E-value=29 Score=25.54 Aligned_cols=78 Identities=18% Similarity=0.114 Sum_probs=56.6
Q ss_pred cHHHHHHHhhcCCCCChHHHHHHHHHHHHHhc-cChHHHHHHHHcCcHHHHHHHHHh------CCHHHHHHHHHHHHHhh
Q 032259 33 GVSILVGMLKESGSDSEATRENCVAALFALGH-GNLRFKGLAKEARAAEVLREVEER------GSQRAKEKAKRILGMLK 105 (144)
Q Consensus 33 ~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~-~~~~~~~~a~~~Gai~~L~~Ll~~------Gt~raK~kA~~lL~~L~ 105 (144)
++..|.+.|..+ ++..+-.|..+|-.+.. +...+...+.....+.-|+.++.. -.+..|+|+..+|+...
T Consensus 51 A~ral~krl~~~---n~~vql~AL~LLd~~vkNCG~~Fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~ 127 (171)
T 1juq_A 51 AVRLLAHKIQSP---QEWEALQALTVLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWT 127 (171)
T ss_dssp HHHHHHHHHTCS---SHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCC---CHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHHH
Confidence 566788888776 68888888887777665 345666666677788889988852 25788999888888877
Q ss_pred cCCCCCCc
Q 032259 106 GREDDDED 113 (144)
Q Consensus 106 ~~~~~~~~ 113 (144)
....++..
T Consensus 128 ~~f~~~~~ 135 (171)
T 1juq_A 128 MALPEEAK 135 (171)
T ss_dssp HHCTTCHH
T ss_pred HHcCCCcH
Confidence 65544433
No 81
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=54.95 E-value=31 Score=24.77 Aligned_cols=78 Identities=15% Similarity=0.072 Sum_probs=56.7
Q ss_pred cHHHHHHHhhcCCCCChHHHHHHHHHHHHHhc-cChHHHHHHHHcCcHHHHHHHHHh---C---CHHHHHHHHHHHHHhh
Q 032259 33 GVSILVGMLKESGSDSEATRENCVAALFALGH-GNLRFKGLAKEARAAEVLREVEER---G---SQRAKEKAKRILGMLK 105 (144)
Q Consensus 33 ~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~-~~~~~~~~a~~~Gai~~L~~Ll~~---G---t~raK~kA~~lL~~L~ 105 (144)
++..|.+.|..+ ++..+-.|..+|-.+.. ....+...+.....+.-|+.++.. | .+..|+|...+++...
T Consensus 39 a~rai~krl~~~---n~~vql~AL~LLe~~vkNCG~~fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~ 115 (148)
T 1mhq_A 39 APWLLAHKIQSP---QEKEALYALTVLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWT 115 (148)
T ss_dssp HHHHHHHHHTCS---SHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHHHTTCCSTTSCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCC---CHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHHccccCCCCCCHHHHHHHHHHHHHHH
Confidence 567888888876 78889888887777765 455666666666778888888763 2 5788999888888777
Q ss_pred cCCCCCCc
Q 032259 106 GREDDDED 113 (144)
Q Consensus 106 ~~~~~~~~ 113 (144)
....+++.
T Consensus 116 ~~f~~~p~ 123 (148)
T 1mhq_A 116 VWFPEDIK 123 (148)
T ss_dssp HHCTTCHH
T ss_pred HHcCCCch
Confidence 65544433
No 82
>3ebb_A Phospholipase A2-activating protein; armadillo repeat, structural genomics consortium, SGC, WD repeat, acetylation, ATP-binding; 1.90A {Homo sapiens}
Probab=53.81 E-value=37 Score=27.21 Aligned_cols=97 Identities=11% Similarity=0.097 Sum_probs=57.1
Q ss_pred HHHHHHHHHHhcCChhhHHHHHhc-C-cHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHH
Q 032259 8 TSRVLLILCNLAASNEGRSAILDA-N-GVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLREV 85 (144)
Q Consensus 8 ~E~AlavL~~La~~~egr~aI~~~-g-~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~L 85 (144)
.--++.+|+|+-.++.++..+... . .+..+...+.. .+.-.+--++++++|++...-..+..-...-+...+..+
T Consensus 165 ~ml~lR~l~NlF~~~~g~~~l~~~~~~il~~~~~~~~~---~nknl~iA~ATl~~NlAv~~~~~~~~~~~~~ll~~l~~i 241 (304)
T 3ebb_A 165 QLLALRTFCNCFVGQAGQKLMMSQRESLMSHAIELKSG---SNKNIHIALATLALNYSVCFHKDHNIEGKAQCLSLISTI 241 (304)
T ss_dssp HHHHHHHHHHGGGSHHHHHHHHHTHHHHHHHHHGGGSS---CCHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCchhHHHHHHHHHHHHHHHHHHhcC---CChhHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHH
Confidence 446788999999999999998753 1 33344433322 134456667778888876210000000111145555566
Q ss_pred HHhC-CHHHHHHHHHHHHHhhcC
Q 032259 86 EERG-SQRAKEKAKRILGMLKGR 107 (144)
Q Consensus 86 l~~G-t~raK~kA~~lL~~L~~~ 107 (144)
++.. .+.+.-++.-+|-.|-..
T Consensus 242 l~~~~d~EalyR~LvALGtL~~~ 264 (304)
T 3ebb_A 242 LEVVQDLEATFRLLVALGTLISD 264 (304)
T ss_dssp HTTCCCHHHHHHHHHHHHHHHTT
T ss_pred HhccCCHHHHHHHHHHHHHHHhC
Confidence 6543 677877777777777743
No 83
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=52.54 E-value=25 Score=26.75 Aligned_cols=57 Identities=16% Similarity=0.183 Sum_probs=47.2
Q ss_pred hHHHHHHHHHHhcCChhhHHHHHh-cCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccC
Q 032259 7 STSRVLLILCNLAASNEGRSAILD-ANGVSILVGMLKESGSDSEATRENCVAALFALGHGN 66 (144)
Q Consensus 7 ~~E~AlavL~~La~~~egr~aI~~-~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~ 66 (144)
..-.++.-|..|..++.|...+.. +..|..|+..|.+. .++.|..|+-+|..+|..+
T Consensus 70 ~~~~~l~CLkalmn~~~G~~~vl~~~~~i~~l~~~L~s~---~~~~r~~~leLL~~lc~~~ 127 (233)
T 2f31_A 70 NQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPA---VPNMMIDAAKLLSALCILP 127 (233)
T ss_dssp HHHHHHHHHHHHTSSHHHHHHHHTSSSHHHHHHTTCCTT---SHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHhCChHHHHHHHcCcHHHHHHHHHhCCC---CchHHHHHHHHHHHHHhCC
Confidence 345678888888999999999977 45899999988764 7899999999999999843
No 84
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=51.08 E-value=16 Score=33.65 Aligned_cols=74 Identities=7% Similarity=-0.033 Sum_probs=53.2
Q ss_pred CcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccC-hHHHHHHHHcCcHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCC
Q 032259 32 NGVSILVGMLKESGSDSEATRENCVAALFALGHGN-LRFKGLAKEARAAEVLREVEERGSQRAKEKAKRILGMLKGRED 109 (144)
Q Consensus 32 g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~-~~~~~~a~~~Gai~~L~~Ll~~Gt~raK~kA~~lL~~L~~~~~ 109 (144)
..+|.|.+.+.+. .++..++.|+.+|..+|... ..+.. -...+++.|+..+.+..+..|+.|...|..+....+
T Consensus 133 ~llp~L~~~l~~~--~~~~~~~~al~~l~~~~~~~~~~l~~--~~~~ll~~l~~~L~~~~~~vR~~a~~al~~l~~~~~ 207 (1230)
T 1u6g_C 133 KITGRLTSAIAKQ--EDVSVQLEALDIMADMLSRQGGLLVN--FHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCG 207 (1230)
T ss_dssp HHHHHHHHHHSCC--SCHHHHHHHHHHHHHHHHHTCSSCTT--THHHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC-
T ss_pred HHHHHHHHHHcCC--CchHHHHHHHHHHHHHHHHhHhHHHH--HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhcC
Confidence 3578888888742 26889999999999999621 11111 013467778888888889999999999998887653
No 85
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=47.68 E-value=56 Score=24.68 Aligned_cols=55 Identities=16% Similarity=0.226 Sum_probs=35.2
Q ss_pred hHHHHHHHHHHhcCC---hhh-HHHH--HhcCcHHHHHHH-hhcCCCCChHHHHHHHHHHHHHhc
Q 032259 7 STSRVLLILCNLAAS---NEG-RSAI--LDANGVSILVGM-LKESGSDSEATRENCVAALFALGH 64 (144)
Q Consensus 7 ~~E~AlavL~~La~~---~eg-r~aI--~~~g~I~~LV~l-L~~G~~~S~~~kE~Ava~L~~Lc~ 64 (144)
+.+.++.+|..++.. ..+ +... .-...+|.|++. |.+. .+..++.|..+|+.++.
T Consensus 71 v~~~al~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~lveK~l~~~---k~~~~~~a~~~l~~~~~ 132 (278)
T 4ffb_C 71 AQEQAIVALNSLIDAFASSSLKNAHNITLISTWTPLLVEKGLTSS---RATTKTQSMSCILSLCG 132 (278)
T ss_dssp HHHHHHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHTSSCC---CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHhcCc---cHHHHHHHHHHHHHHHH
Confidence 357788888887752 111 2211 223467888876 5554 57889999999988875
No 86
>3ebb_A Phospholipase A2-activating protein; armadillo repeat, structural genomics consortium, SGC, WD repeat, acetylation, ATP-binding; 1.90A {Homo sapiens}
Probab=47.38 E-value=88 Score=24.97 Aligned_cols=97 Identities=15% Similarity=0.111 Sum_probs=61.3
Q ss_pred chHHHHHHHHHHhcCChhhHHHHHh-cCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHH
Q 032259 6 ESTSRVLLILCNLAASNEGRSAILD-ANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLRE 84 (144)
Q Consensus 6 ~~~E~AlavL~~La~~~egr~aI~~-~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~ 84 (144)
++.-.+..++-|+|..-.....+-+ .-.+..+..+++.- .++++.-.+..+|.+|...+..+..++...|+...+-.
T Consensus 206 nl~iA~ATl~~NlAv~~~~~~~~~~~~~ll~~l~~il~~~--~d~EalyR~LvALGtL~~~~~~~~~lak~l~~~~~v~~ 283 (304)
T 3ebb_A 206 NIHIALATLALNYSVCFHKDHNIEGKAQCLSLISTILEVV--QDLEATFRLLVALGTLISDDSNAVQLAKSLGVDSQIKK 283 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHTTC--CCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHGGG
T ss_pred hHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHhcc--CCHHHHHHHHHHHHHHHhCChhHHHHHHHcCHHHHHHH
Confidence 3444556677777752110000000 01334455566543 36788888889999998877778888888888777666
Q ss_pred HHHh-CCHHHHHHHHHHHHHh
Q 032259 85 VEER-GSQRAKEKAKRILGML 104 (144)
Q Consensus 85 Ll~~-Gt~raK~kA~~lL~~L 104 (144)
+... ..++.++.++.+|++|
T Consensus 284 ~~~~~~~~kv~~~~~~~~~~l 304 (304)
T 3ebb_A 284 YSSVSEPAKVSECCRFILNLL 304 (304)
T ss_dssp GGGCCSSHHHHHHHHHHHTTC
T ss_pred HHhCCCchhHHHHHHHHHHhC
Confidence 6655 3688888888887654
No 87
>2fv2_A RCD1 required for cell differentiation1 homolog; armadillo-repeat, transcription; 2.20A {Homo sapiens}
Probab=43.75 E-value=61 Score=26.04 Aligned_cols=54 Identities=13% Similarity=0.118 Sum_probs=42.7
Q ss_pred HHHHHHHHHHhcC--ChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhc
Q 032259 8 TSRVLLILCNLAA--SNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGH 64 (144)
Q Consensus 8 ~E~AlavL~~La~--~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~ 64 (144)
.=.++.|++.|.+ .+|--.-+.+...||..+++|..| |.-.|--|.-+|..+=.
T Consensus 119 RLtsLGVIgaLvK~dd~eVi~fLL~tEiiplCLrime~G---selSKtvAtfIlqKIL~ 174 (268)
T 2fv2_A 119 RLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESG---SELSKTVATFILQKILL 174 (268)
T ss_dssp HHHHHHHHHHHGGGCCHHHHHHHHHTTHHHHHHHHHHHS---CHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHhccCcHHHHHHHHhhhHHHHHHHHHhhc---cHHHHHHHHHHHHHHhc
Confidence 3457889999996 444444557788999999999999 89999999998876544
No 88
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=41.52 E-value=1.8e+02 Score=27.32 Aligned_cols=76 Identities=14% Similarity=0.061 Sum_probs=58.2
Q ss_pred cHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHHHHhCCHHHHHHHHHHHHHhhcCC-CCC
Q 032259 33 GVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLREVEERGSQRAKEKAKRILGMLKGRE-DDD 111 (144)
Q Consensus 33 ~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~Ll~~Gt~raK~kA~~lL~~L~~~~-~~~ 111 (144)
.+|.|...|.++. ....|.-|..+|-.|+...+. .....-+.+||.+.+...+=-+..|+.|...+.-+...- |.|
T Consensus 134 ~~~~~~~~~~~~~--kw~~k~~~l~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~d~k~~v~~~~~~~~~~~~~~~~n~d 210 (986)
T 2iw3_A 134 LLPHLTNAIVETN--KWQEKIAILAAFSAMVDAAKD-QVALRMPELIPVLSETMWDTKKEVKAAATAAMTKATETVDNKD 210 (986)
T ss_dssp HHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHSHH-HHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHGGGCCCTT
T ss_pred HHHHHHHHhcccc--chHHHHHHHHHHHHHHHHhHH-HHHHhccchhcchHhhcccCcHHHHHHHHHHHHHHHhcCCCcc
Confidence 4688899897652 588999999999999975543 223345778999999888888888998888887777654 555
No 89
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=40.50 E-value=29 Score=30.18 Aligned_cols=91 Identities=18% Similarity=0.141 Sum_probs=55.8
Q ss_pred hHHHHHHHHHHhcC-ChhhHHHHHhcCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChH-HHHHHHHcCcHHHHHH
Q 032259 7 STSRVLLILCNLAA-SNEGRSAILDANGVSILVGMLKESGSDSEATRENCVAALFALGHGNLR-FKGLAKEARAAEVLRE 84 (144)
Q Consensus 7 ~~E~AlavL~~La~-~~egr~aI~~~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~-~~~~a~~~Gai~~L~~ 84 (144)
+.-+|+..+.++.. +|+- +-..+.++.|.++|.+. ++..+.+|+.+|..+|..++. +... -+.++..|..
T Consensus 164 VRK~A~~al~kl~~~~p~~---~~~~~~~~~l~~lL~d~---d~~V~~~a~~~l~~i~~~~~~~~~~~--~~~~~~~L~~ 235 (621)
T 2vgl_A 164 VKQSAALCLLRLYRTSPDL---VPMGDWTSRVVHLLNDQ---HLGVVTAATSLITTLAQKNPEEFKTS--VSLAVSRLSR 235 (621)
T ss_dssp HHHHHHHHHHHHHHHCGGG---CCCCSCHHHHHHHTTCS---CHHHHHHHHHHHHHHHHHCHHHHTTH--HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhChhh---cCchhHHHHHHHHhCCC---CccHHHHHHHHHHHHHHhChHHHHHH--HHHHHHHHHH
Confidence 44556666666554 3321 11136789999999764 789999999999999986643 1111 1223444445
Q ss_pred HHHhC-------------CHHHHHHHHHHHHHhhcCC
Q 032259 85 VEERG-------------SQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 85 Ll~~G-------------t~raK~kA~~lL~~L~~~~ 108 (144)
++..+ .|..+-+ +|++|....
T Consensus 236 ll~~~~~~~~~~~~~~~~~~w~qi~---il~ll~~~~ 269 (621)
T 2vgl_A 236 IVTSASTDLQDYTYYFVPAPWLSVK---LLRLLQCYP 269 (621)
T ss_dssp HHHCCSSSCSTTEETTEESHHHHHH---HHHHGGGSS
T ss_pred HHhCCCCCccchhhcCCCCchHHHH---HHHHHHHhC
Confidence 54443 4788877 555555554
No 90
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=39.96 E-value=56 Score=26.89 Aligned_cols=57 Identities=16% Similarity=0.183 Sum_probs=46.8
Q ss_pred hHHHHHHHHHHhcCChhhHHHHHh-cCcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccC
Q 032259 7 STSRVLLILCNLAASNEGRSAILD-ANGVSILVGMLKESGSDSEATRENCVAALFALGHGN 66 (144)
Q Consensus 7 ~~E~AlavL~~La~~~egr~aI~~-~g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~ 66 (144)
..-.++.-|..|..+..|...+.. +.+|..|+..|.+. .++.+-.++-+|..+|..+
T Consensus 74 ~~~~~l~CLkalmN~~~Gl~~vl~~~~~i~~l~~sL~s~---~~~~r~~vleLL~alc~~~ 131 (386)
T 2bnx_A 74 NQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPA---VPNMMIDAAKLLSALCILP 131 (386)
T ss_dssp HHHHHHHHHHHHTSSHHHHHHHHHSSSHHHHHHHTCCTT---SHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHcCcHHHHHHHHHhCCC---CchHHHHHHHHHHHHHcCC
Confidence 345677888888999999999976 46899999998764 7889999999999999843
No 91
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=38.77 E-value=58 Score=26.78 Aligned_cols=56 Identities=16% Similarity=0.184 Sum_probs=47.0
Q ss_pred HHHHHHHHHHhcCChhhHHHHHhc-CcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccC
Q 032259 8 TSRVLLILCNLAASNEGRSAILDA-NGVSILVGMLKESGSDSEATRENCVAALFALGHGN 66 (144)
Q Consensus 8 ~E~AlavL~~La~~~egr~aI~~~-g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~ 66 (144)
.-.++.-|..|-.+..|...+..+ ..|..|+..|.+. .++.+..|.-+|..+|..+
T Consensus 137 q~~~l~CLkalmN~~~G~~~vl~~~~~i~~l~~~L~s~---~~~~~~~aleLL~~lc~~~ 193 (383)
T 3eg5_B 137 QHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPA---VPNMMIDAAKLLSALCILP 193 (383)
T ss_dssp HHHHHHHHHHHTSSHHHHHHHHTCSSHHHHHHHTCCTT---SHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHhcchhhHHHHHcChHHHHHHHHHhCCC---chHHHHHHHHHHHHHHhCc
Confidence 355778888888999999999774 5899999998774 7999999999999999843
No 92
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=37.79 E-value=85 Score=25.17 Aligned_cols=73 Identities=19% Similarity=0.204 Sum_probs=57.2
Q ss_pred CcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccC-hHHHHHHHHcCcHHHHHHHHHhCCHHHHHHHHHHHHHhhcCC
Q 032259 32 NGVSILVGMLKESGSDSEATRENCVAALFALGHGN-LRFKGLAKEARAAEVLREVEERGSQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 32 g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~-~~~~~~a~~~Gai~~L~~Ll~~Gt~raK~kA~~lL~~L~~~~ 108 (144)
..+..|..+|..- .+..+.+|..+|-.+-..- ...+.. .-.-.++.++.++.+-..+..=+|...|+.|=..-
T Consensus 33 ~~l~~L~~LL~dk---D~~vk~raL~~LeellK~~~~~l~~~-~~e~~Ld~iI~llk~~dEkval~A~r~L~~LLe~v 106 (265)
T 3b2a_A 33 RALFLILELAGED---DETTRLRAFVALGEILKRADSDLRMM-VLERHLDVFINALSQENEKVTIKALRALGYLVKDV 106 (265)
T ss_dssp HHHHHHHHHTTSS---CHHHHHHHHHHHHHHHHHSCHHHHHH-HHHHHHHHHHHTCCSTTHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHhcc---chHHHHHHHHHHHHHHHhccccccHH-HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHcCC
Confidence 4788899999774 6889999999999998743 333333 33447899999998889999999999998887754
No 93
>1vdy_A Hypothetical protein (RAFL09-17-B18); structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} PDB: 2dcp_A
Probab=36.39 E-value=92 Score=22.34 Aligned_cols=71 Identities=13% Similarity=0.191 Sum_probs=47.7
Q ss_pred HHHHHHhhcCCCCChHHHHHHHHHHHHHhc-cChHHHHHHH-HcCcHHHHHHHHH-----hC---CHHHHHHHHHHHHHh
Q 032259 35 SILVGMLKESGSDSEATRENCVAALFALGH-GNLRFKGLAK-EARAAEVLREVEE-----RG---SQRAKEKAKRILGML 104 (144)
Q Consensus 35 ~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~-~~~~~~~~a~-~~Gai~~L~~Ll~-----~G---t~raK~kA~~lL~~L 104 (144)
..|.+.|... ++..+-.|.-+|-.||. +++.++..+. ....|..|.+.-- .| ....|.+|..++.+|
T Consensus 52 ~~L~kRL~~k---~~~vk~KaL~lL~yL~~~Gs~~f~~~~r~~~~~Ik~l~~F~g~~dp~~G~d~g~~VR~~AkEl~~ll 128 (140)
T 1vdy_A 52 EFILKRLDNK---SPIVKQKALRLIKYAVGKSGSEFRREMQRNSVAVRNLFHYKGHPDPLKGDALNKAVRETAHETISAI 128 (140)
T ss_dssp HHHHHHHTSS---SHHHHHHHHHHHHHHTTTSCHHHHHHHHHTTHHHHTTTTCCCCCCTTTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC---CcceeehHHHHHHHHHHhCCHHHHHHHHHhHHHHHHHHhcCCCCCcccccchhHHHHHHHHHHHHHH
Confidence 4566666664 68889999999999998 6665555554 3444444443321 23 255689999999998
Q ss_pred hcCC
Q 032259 105 KGRE 108 (144)
Q Consensus 105 ~~~~ 108 (144)
....
T Consensus 129 ~d~~ 132 (140)
T 1vdy_A 129 FSEE 132 (140)
T ss_dssp TCCS
T ss_pred hCcC
Confidence 8764
No 94
>1elk_A Target of MYB1; superhelix of helices, endocytosis/exocytosis complex; 1.50A {Homo sapiens} SCOP: a.118.9.2
Probab=34.84 E-value=1.2e+02 Score=21.59 Aligned_cols=72 Identities=10% Similarity=0.000 Sum_probs=48.9
Q ss_pred cHHHHHHHhh-cCCCCChHHHHHHHHHHHHHhc-cChHHHHHHHHcCcHHH-HHHHHHh-C--CHHHHHHHHHHHHHhhc
Q 032259 33 GVSILVGMLK-ESGSDSEATRENCVAALFALGH-GNLRFKGLAKEARAAEV-LREVEER-G--SQRAKEKAKRILGMLKG 106 (144)
Q Consensus 33 ~I~~LV~lL~-~G~~~S~~~kE~Ava~L~~Lc~-~~~~~~~~a~~~Gai~~-L~~Ll~~-G--t~raK~kA~~lL~~L~~ 106 (144)
++..|.+.|. .+ ++..+-.|..+|-.+.. +...+...+.....+.- |+.++.. . ....|+|+..+|+.-..
T Consensus 54 a~ral~krl~~~~---n~~v~l~AL~LLd~~vkNcG~~fh~eva~~~fl~e~Lvk~~~~k~~~~~~Vk~kil~li~~W~~ 130 (157)
T 1elk_A 54 ALRAVKKRIVGNK---NFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNLIQSWAD 130 (157)
T ss_dssp HHHHHHHHHTTCC---CHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHTHHHHSTTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCC---CHHHHHHHHHHHHHHHHHhCHHHHHHHhhHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHHH
Confidence 5667777786 34 68888888877776655 44566666656667776 7787742 3 35788998877777665
Q ss_pred C
Q 032259 107 R 107 (144)
Q Consensus 107 ~ 107 (144)
.
T Consensus 131 ~ 131 (157)
T 1elk_A 131 A 131 (157)
T ss_dssp H
T ss_pred H
Confidence 3
No 95
>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii}
Probab=33.99 E-value=1.7e+02 Score=23.02 Aligned_cols=62 Identities=19% Similarity=0.255 Sum_probs=42.3
Q ss_pred cHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHHHHhCCHHHHHHHHHHHHH
Q 032259 33 GVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLREVEERGSQRAKEKAKRILGM 103 (144)
Q Consensus 33 ~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~Ll~~Gt~raK~kA~~lL~~ 103 (144)
.+|-|..+|-++ ..--|-.||-+|.+|+..++.+|.++. ..|.++ .+-++-.+++....|-.
T Consensus 182 fLprL~aLL~D~---deiVRaSaVEtL~~lA~~npklRkii~-----~kl~e~-~D~S~lv~~~V~egL~r 243 (253)
T 2db0_A 182 FLPRIINLLHDG---DEIVRASAVEALVHLATLNDKLRKVVI-----KRLEEL-NDTSSLVNKTVKEGISR 243 (253)
T ss_dssp GHHHHHGGGGCS---SHHHHHHHHHHHHHHHTSCHHHHHHHH-----HHHHHC-CCSCHHHHHHHHHHHHH
T ss_pred chHHHHHHHcCc---chhhhHHHHHHHHHHHHcCHHHHHHHH-----HHHHHh-cCcHHHHHHHHHHHHHH
Confidence 678888888886 677899999999999998888777643 233322 23355555555544433
No 96
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=33.94 E-value=58 Score=24.63 Aligned_cols=78 Identities=15% Similarity=0.204 Sum_probs=55.4
Q ss_pred cCcHHHHHHHhhc--CCCCC------hHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHHHHhCCHHHHHHHHHHHH
Q 032259 31 ANGVSILVGMLKE--SGSDS------EATRENCVAALFALGHGNLRFKGLAKEARAAEVLREVEERGSQRAKEKAKRILG 102 (144)
Q Consensus 31 ~g~I~~LV~lL~~--G~~~S------~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~Ll~~Gt~raK~kA~~lL~ 102 (144)
.+|+..|+++|.. ..... ...+..++..|-.++........+...+..+..|...+.+-.++.|..|..+|.
T Consensus 42 ~~Gl~~L~~~L~~~~~~~~~~~~~~~~~~~~~~l~CLkalmn~~~G~~~vl~~~~~i~~l~~~L~s~~~~~r~~~leLL~ 121 (233)
T 2f31_A 42 AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLS 121 (233)
T ss_dssp HHHHHHHHHHHHHHHTCC-----CCHHHHHHHHHHHHHHHTSSHHHHHHHHTSSSHHHHHHTTCCTTSHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHhCChHHHHHHHcCcHHHHHHHHHhCCCCchHHHHHHHHHH
Confidence 5788888888854 10011 122445667777777655566677777888988888887788999999999998
Q ss_pred HhhcCC
Q 032259 103 MLKGRE 108 (144)
Q Consensus 103 ~L~~~~ 108 (144)
.+.-..
T Consensus 122 ~lc~~~ 127 (233)
T 2f31_A 122 ALCILP 127 (233)
T ss_dssp HHHTCS
T ss_pred HHHhCC
Confidence 888775
No 97
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=32.48 E-value=93 Score=23.38 Aligned_cols=62 Identities=5% Similarity=0.037 Sum_probs=41.4
Q ss_pred CChHHHHHHHHHHHHHhc--cChHHHHHHHHcCcHHHHHHHHHhCCHHHHHHHHHHHHHhhcCC
Q 032259 47 DSEATRENCVAALFALGH--GNLRFKGLAKEARAAEVLREVEERGSQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 47 ~S~~~kE~Ava~L~~Lc~--~~~~~~~~a~~~Gai~~L~~Ll~~Gt~raK~kA~~lL~~L~~~~ 108 (144)
.+|+.+..++..|..+-. +....-.-..-.-+++.|..++.+-.+..|..|..++-.+-++-
T Consensus 151 Knpkv~~~~l~~l~~~l~~fg~~~~~~k~~l~~i~~~l~k~l~d~~~~VR~aA~~l~~~ly~~~ 214 (278)
T 4ffb_C 151 KLPKLIAAAANCVYELMAAFGLTNVNVQTFLPELLKHVPQLAGHGDRNVRSQTMNLIVEIYKVT 214 (278)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHGGGHHHHHTCSSHHHHHHHHHHHHHHHTC-
T ss_pred cCHHHHHHHHHHHHHHHHHhCCCcCCchhHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHh
Confidence 479999988888887644 21111001111235667777888889999999999998887765
No 98
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=32.28 E-value=89 Score=28.68 Aligned_cols=69 Identities=12% Similarity=0.074 Sum_probs=49.8
Q ss_pred cHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHHHHhCCHHHHHHHHHHHHHhhcCC
Q 032259 33 GVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLREVEERGSQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 33 ~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~Ll~~Gt~raK~kA~~lL~~L~~~~ 108 (144)
.++.|++.|.+. +++.|..|+.+|..++..-.. -...-+++.|+..+.+..+..|..|...|..+....
T Consensus 49 il~~Ll~~L~d~---~~~vR~~A~~~L~~l~~~~~~----~~~~~i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l 117 (1230)
T 1u6g_C 49 VVKMILKLLEDK---NGEVQNLAVKCLGPLVSKVKE----YQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGEL 117 (1230)
T ss_dssp HHHHHHHHTTCS---SHHHHHHHHHHHHHHHTTSCH----HHHHHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcCC---CHHHHHHHHHHHHHHHHhCCH----HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhC
Confidence 467788888753 788999999999998863222 112336777887777777778888888888776544
No 99
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=27.60 E-value=2.1e+02 Score=26.94 Aligned_cols=68 Identities=21% Similarity=0.157 Sum_probs=45.2
Q ss_pred CcHHHHHHHhhcCCCCChHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHHHHhCCHHHHHHHHHHHHHhhcCC
Q 032259 32 NGVSILVGMLKESGSDSEATRENCVAALFALGHGNLRFKGLAKEARAAEVLREVEERGSQRAKEKAKRILGMLKGRE 108 (144)
Q Consensus 32 g~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~Ll~~Gt~raK~kA~~lL~~L~~~~ 108 (144)
..++.++++|... ..+..|-.|+-+|..+|.+++. .-++..|..++.+-.+..++.|.-.|-++-...
T Consensus 611 e~v~rlv~~L~~~--~d~~VR~gAalALGli~aGn~~-------~~aid~L~~L~~D~d~~Vrq~Ai~ALG~Ig~gt 678 (963)
T 4ady_A 611 TTVPRIVQLLSKS--HNAHVRCGTAFALGIACAGKGL-------QSAIDVLDPLTKDPVDFVRQAAMIALSMILIQQ 678 (963)
T ss_dssp SSHHHHTTTGGGC--SCHHHHHHHHHHHHHHTSSSCC-------HHHHHHHHHHHTCSSHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHhc--CCHHHHHHHHHHHHHhccCCCc-------HHHHHHHHHHccCCCHHHHHHHHHHHHHHhcCC
Confidence 3578888866542 2688899999999999886543 124455666666667777777766666555443
No 100
>3tzl_A Tryptophanyl-tRNA synthetase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure; HET: ADP TRP; 2.15A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3m5w_A*
Probab=24.82 E-value=1.5e+02 Score=23.78 Aligned_cols=55 Identities=13% Similarity=0.131 Sum_probs=38.5
Q ss_pred hHHHHHHHHHHHHHhccC-hHHHHHHHHcCcHHHHHHHHHhCCHHHHHHHHHHHHHhhc
Q 032259 49 EATRENCVAALFALGHGN-LRFKGLAKEARAAEVLREVEERGSQRAKEKAKRILGMLKG 106 (144)
Q Consensus 49 ~~~kE~Ava~L~~Lc~~~-~~~~~~a~~~Gai~~L~~Ll~~Gt~raK~kA~~lL~~L~~ 106 (144)
...|...+..|..+...- +.+..+..++ .-|-.++..|+.+|++.|...|...++
T Consensus 263 ~~~K~~lae~l~~~l~pir~~~~~~~~~~---~~l~~il~~G~~~a~~~a~~t~~~v~~ 318 (322)
T 3tzl_A 263 GHFKIYLNELVNAYFKEAREKYNELLEKP---SHLKEILDFGATKARKIAQEKMQKIYE 318 (322)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHHSH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHcCH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346777777777776522 3333343333 458888999999999999999987653
No 101
>2el7_A Tryptophanyl-tRNA synthetase; aminoacyl-tRNA synthetase, translation, structural GEN NPPSFA; 2.50A {Thermus thermophilus}
Probab=24.62 E-value=1.4e+02 Score=24.17 Aligned_cols=68 Identities=15% Similarity=0.183 Sum_probs=43.9
Q ss_pred HHHHHhhcCCCCChHHHHHHHHHHHHHhccCh-HHHHHHHHcCcHHHHHHHHHhCCHHHHHHHHHHHHHhhc
Q 032259 36 ILVGMLKESGSDSEATRENCVAALFALGHGNL-RFKGLAKEARAAEVLREVEERGSQRAKEKAKRILGMLKG 106 (144)
Q Consensus 36 ~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~~-~~~~~a~~~Gai~~L~~Ll~~Gt~raK~kA~~lL~~L~~ 106 (144)
.|.+-.+.|.......|+..+..|..+...-. .+.....+. ..|-+++..|+.+|++.|...|+..++
T Consensus 255 ~l~~~~~~g~~~~~~~K~~La~~i~~~l~p~re~~~~~~~~~---~~l~~il~~G~~~a~~~a~~~~~~v~~ 323 (337)
T 2el7_A 255 ALKEEYRKAGVGTYVVKRILFDHLMEALRPIRERAEALKKDP---DYVMDALLEGAKRARAVAQATMEEVRE 323 (337)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHcCH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444311134568777888887776433 333333332 357888899999999999999988776
No 102
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=24.27 E-value=2.9e+02 Score=22.45 Aligned_cols=30 Identities=7% Similarity=0.027 Sum_probs=15.7
Q ss_pred cHHHHHHHhhcCCCCChHHHHHHHHHHHHHhcc
Q 032259 33 GVSILVGMLKESGSDSEATRENCVAALFALGHG 65 (144)
Q Consensus 33 ~I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~ 65 (144)
.+..+-+++.+. ++..+-||+++|+.++..
T Consensus 177 ~~~~l~~ll~d~---n~~V~~~Al~lL~ei~~~ 206 (355)
T 3tjz_B 177 WVNEAQEAASSD---NIMVQYHALGLLYHVRKN 206 (355)
T ss_dssp THHHHHHHTTCS---SHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCC---CccHHHHHHHHHHHHHhh
Confidence 444444555443 455555666666666553
No 103
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI, ligase; HET: TRP; 2.50A {Thermotoga maritima}
Probab=23.96 E-value=1.8e+02 Score=23.45 Aligned_cols=55 Identities=11% Similarity=0.164 Sum_probs=38.4
Q ss_pred hHHHHHHHHHHHHHhcc-ChHHHHHHHHcCcHHHHHHHHHhCCHHHHHHHHHHHHHhhc
Q 032259 49 EATRENCVAALFALGHG-NLRFKGLAKEARAAEVLREVEERGSQRAKEKAKRILGMLKG 106 (144)
Q Consensus 49 ~~~kE~Ava~L~~Lc~~-~~~~~~~a~~~Gai~~L~~Ll~~Gt~raK~kA~~lL~~L~~ 106 (144)
..+|+..+..|..+... .+.+.....+++ -|-.++..|+.+|++.|...|+-.++
T Consensus 279 ~~~K~~La~~i~~~l~pire~~~~~~~~~~---~~~~il~~g~~~a~~~a~~t~~~v~~ 334 (340)
T 2g36_A 279 VDCKKLLLKNMKRKLAPIWENFRKIDEDPH---YVDDVIMEGTKKAREVAAKTMEEVRR 334 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSTT---HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcChH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34577777777777662 233334444443 46677899999999999999987764
No 104
>1ho8_A Vacuolar ATP synthase subunit H; heat repeat, hydrolase; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9
Probab=23.76 E-value=3.5e+02 Score=23.26 Aligned_cols=56 Identities=13% Similarity=0.117 Sum_probs=43.4
Q ss_pred HHHHHHHHHhcCChhhHHHHHhcCc--HHHHHHHhhcCCCCChHHHHHHHHHHHHHhccC
Q 032259 9 SRVLLILCNLAASNEGRSAILDANG--VSILVGMLKESGSDSEATRENCVAALFALGHGN 66 (144)
Q Consensus 9 E~AlavL~~La~~~egr~aI~~~g~--I~~LV~lL~~G~~~S~~~kE~Ava~L~~Lc~~~ 66 (144)
=.++-.|..|+-+++..+.+...+. ++.|+++++.. ...+...-++++|.+|...+
T Consensus 246 Y~~ll~iWlLSF~~~~~~~l~~~~i~~~~~L~~i~k~s--~KEKvvRv~la~l~Nll~~~ 303 (480)
T 1ho8_A 246 YHSLLLIWLLTFNPVFANELVQKYLSDFLDLLKLVKIT--IKEKVSRLCISIILQCCSTR 303 (480)
T ss_dssp HHHHHHHHHHTTSHHHHHHHHTTSHHHHHHHHHHHHHC--CSHHHHHHHHHHHHHTTSSS
T ss_pred HHHHHHHHHHHcCHHHHHHHHhcchHHHHHHHHHHHhh--ccchhHHHHHHHHHHHhccc
Confidence 4567788899999998888876663 37888999884 35667888999999998743
No 105
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=22.55 E-value=1.9e+02 Score=23.67 Aligned_cols=82 Identities=15% Similarity=0.183 Sum_probs=57.1
Q ss_pred HHHHhcCcHHHHHHHhhc--CCCCC------hHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHHHHhCCHHHHHHH
Q 032259 26 SAILDANGVSILVGMLKE--SGSDS------EATRENCVAALFALGHGNLRFKGLAKEARAAEVLREVEERGSQRAKEKA 97 (144)
Q Consensus 26 ~aI~~~g~I~~LV~lL~~--G~~~S------~~~kE~Ava~L~~Lc~~~~~~~~~a~~~Gai~~L~~Ll~~Gt~raK~kA 97 (144)
..+. .+|+..|+++|.. ..... ..-+..++..|-.+.........+...+..|..|...+.+-.++.|..|
T Consensus 104 ~~F~-~~Gl~~Ll~iL~~~~~~~~~~~~~~d~~~q~~~l~CLkalmN~~~G~~~vl~~~~~i~~l~~~L~s~~~~~~~~a 182 (383)
T 3eg5_B 104 QTFG-AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDA 182 (383)
T ss_dssp HHHH-HHHHHHHHHHHHHHHTCC-------CHHHHHHHHHHHHHHTSSHHHHHHHHTCSSHHHHHHHTCCTTSHHHHHHH
T ss_pred HHHH-HccHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHHHHhcchhhHHHHHcChHHHHHHHHHhCCCchHHHHHH
Confidence 3344 5688888888852 10001 1234446677777765545666677788889999998888899999999
Q ss_pred HHHHHHhhcCC
Q 032259 98 KRILGMLKGRE 108 (144)
Q Consensus 98 ~~lL~~L~~~~ 108 (144)
..+|-.+.-..
T Consensus 183 leLL~~lc~~~ 193 (383)
T 3eg5_B 183 AKLLSALCILP 193 (383)
T ss_dssp HHHHHHHHTCC
T ss_pred HHHHHHHHhCc
Confidence 99998888775
Done!