Query 032266
Match_columns 144
No_of_seqs 19 out of 21
Neff 2.2
Searched_HMMs 13730
Date Mon Mar 25 19:14:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032266.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032266hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1jhga_ a.4.12.1 (A:) Trp repr 49.2 29 0.0021 23.2 6.6 49 4-52 4-52 (101)
2 d2ahra1 a.100.1.10 (A:153-256) 27.2 72 0.0052 20.3 6.5 52 9-60 40-103 (104)
3 d1hf8a1 a.7.8.2 (A:150-281) Cl 25.2 58 0.0042 22.0 4.9 55 2-66 49-103 (132)
4 d1t6ca1 c.55.1.8 (A:7-132) Exo 22.8 35 0.0025 22.3 3.2 39 35-73 55-105 (126)
5 d2fbqa1 a.4.1.9 (A:2-80) Trans 20.7 75 0.0055 18.2 5.8 60 10-69 4-71 (79)
6 d1pjra2 c.37.1.19 (A:319-651) 19.3 16 0.0011 25.0 0.8 15 46-60 281-295 (333)
7 d1dosa_ c.1.10.2 (A:) Fructose 19.2 48 0.0035 25.8 3.9 61 58-122 202-268 (358)
8 d1f46a_ d.129.4.1 (A:) Cell-di 19.0 78 0.0057 20.9 4.5 46 10-55 91-138 (139)
9 d1hx8a1 a.7.8.2 (A:167-299) AP 18.8 83 0.0061 21.2 4.7 55 2-66 46-100 (133)
10 d1ps9a1 c.1.4.1 (A:1-330) 2,4- 18.4 27 0.002 25.9 2.1 66 5-77 133-213 (330)
No 1
>d1jhga_ a.4.12.1 (A:) Trp repressor, TrpR {Escherichia coli [TaxId: 562]}
Probab=49.21 E-value=29 Score=23.21 Aligned_cols=49 Identities=12% Similarity=0.103 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHH
Q 032266 4 IVDALSSAYKEFVAAAANVLEAKELSVAQKTAATDAALENFKQRWELFR 52 (144)
Q Consensus 4 ~Vd~l~~AY~~fv~AaaavleAke~~gg~ktaaTDaAle~fkqr~eLF~ 52 (144)
+.+.-+..|+.|+.....+-+..+...--.-.-|..=++++-+||++++
T Consensus 4 m~~~~~~~w~~f~~ll~~~~~~~~~~~fl~dLlT~~E~~~la~R~~ia~ 52 (101)
T d1jhga_ 4 MAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLTPDEREALGTRVRIIE 52 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred hhhhhhhHHHHHHHHHHHccCHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 4455667899999998887776666666677778999999999999876
No 2
>d2ahra1 a.100.1.10 (A:153-256) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}
Probab=27.19 E-value=72 Score=20.29 Aligned_cols=52 Identities=15% Similarity=0.130 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhh-hh-----hhhHHHHHHHHHH------HHHHHHhhhchHH
Q 032266 9 SSAYKEFVAAAANVLEAKELSVAQ-KT-----AATDAALENFKQR------WELFRVACDQAEE 60 (144)
Q Consensus 9 ~~AY~~fv~AaaavleAke~~gg~-kt-----aaTDaAle~fkqr------~eLF~vACD~Aee 60 (144)
+=+++-|+.++.-+.+....+.-. +. --|-++|+.|+++ .+.+..|.+++.|
T Consensus 40 ~l~~~t~~gs~~ll~~~~~~p~~l~~~V~SpgGtT~agl~~le~~~~~~~i~~a~~aA~~Rs~e 103 (104)
T d2ahra1 40 EIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLMELERLGLTATVSSAIDKTIDKAKS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHSSSCHHHHHHHHCCTTSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHhccCCChhHHHHHHHHHHCChHHHHHHHHHHHHHHHhc
Confidence 345677777776666655544322 21 1378899999876 3445555565554
No 3
>d1hf8a1 a.7.8.2 (A:150-281) Clathrin assembly lymphoid myeloid leukaemia protein, Calm {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=25.18 E-value=58 Score=22.03 Aligned_cols=55 Identities=11% Similarity=0.131 Sum_probs=36.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHhhhchHHHHHHHH
Q 032266 2 DNIVDALSSAYKEFVAAAANVLEAKELSVAQKTAATDAALENFKQRWELFRVACDQAEEFVESVK 66 (144)
Q Consensus 2 Ds~Vd~l~~AY~~fv~AaaavleAke~~gg~ktaaTDaAle~fkqr~eLF~vACD~AeelVeSvr 66 (144)
..+|..+-+-|..+=+..+++||.= -. -...| =+.-+++|+-++.|+|++++..+
T Consensus 49 ~llvkds~~lY~~inegiinLLd~f--Fe---m~k~d-----a~~al~iykr~~~q~e~L~~f~~ 103 (132)
T d1hf8a1 49 MLLFKDAIRLFAAYNEGIINLLEKY--FD---MKKNQ-----CKEGLDIYKKFLTRMTRISEFLK 103 (132)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHS--SS---SCHHH-----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--Hh---cCHHH-----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777888999999999999841 01 11111 12345677888888888877654
No 4
>d1t6ca1 c.55.1.8 (A:7-132) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]}
Probab=22.79 E-value=35 Score=22.27 Aligned_cols=39 Identities=33% Similarity=0.519 Sum_probs=28.6
Q ss_pred hhhHHHHHHHHHHHHHHHH------------hhhchHHHHHHHHHhhcccc
Q 032266 35 AATDAALENFKQRWELFRV------------ACDQAEEFVESVKQRIGSEC 73 (144)
Q Consensus 35 aaTDaAle~fkqr~eLF~v------------ACD~AeelVeSvrqRIgSec 73 (144)
.++-.+|..|++..+-|.+ -+.+.++|++.|+++.|=+.
T Consensus 55 ~~~~~~l~~f~~~~~~~~v~~~~~vaTsA~R~A~N~~~~~~~i~~~tgi~i 105 (126)
T d1t6ca1 55 EETIQVLKEYKKLIDEFKVERVKAVATEAIRRAKNAEEFLERVKREVGLVV 105 (126)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEECHHHHTSTTHHHHHHHHHHHTCCCE
T ss_pred HHHHHHHHHHHHHHHhcCccceEEehhHHHHhCcCHHHHHHHHHHHHCCCe
Confidence 3455677778777776654 24788999999999988544
No 5
>d2fbqa1 a.4.1.9 (A:2-80) Transcriptional regulator PsrA {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.67 E-value=75 Score=18.16 Aligned_cols=60 Identities=13% Similarity=0.222 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhh-hhhh-----hH-HHHHHHHHHHHHHHHhhhch-HHHHHHHHHhh
Q 032266 10 SAYKEFVAAAANVLEAKELSVAQ-KTAA-----TD-AALENFKQRWELFRVACDQA-EEFVESVKQRI 69 (144)
Q Consensus 10 ~AY~~fv~AaaavleAke~~gg~-ktaa-----TD-aAle~fkqr~eLF~vACD~A-eelVeSvrqRI 69 (144)
+.-+.++++|..++..+.-.+-- +..+ +- +-..-|..|.+||...|++. +.+.+.+++.+
T Consensus 4 ~tre~Il~aa~~~~~~~G~~~~ti~~Ia~~agvs~~s~y~~F~~K~~l~~~~~~~~~~~~~~~~~~~~ 71 (79)
T d2fbqa1 4 ETVERILDAAEQLFAEKGFAETSLRLITSKAGVNLAAVNYHFGSKKALIQAVFSRFLGPFCASLEKEL 71 (79)
T ss_dssp HHHHHHHHHHHHHHHHHCSTTCCHHHHHHHHTSCHHHHHHHTCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCcccccHHHHHHHHCcChhHHHHHCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999887654321 1111 22 23467889999999988865 45566665544
No 6
>d1pjra2 c.37.1.19 (A:319-651) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=19.29 E-value=16 Score=24.99 Aligned_cols=15 Identities=33% Similarity=0.328 Sum_probs=12.3
Q ss_pred HHHHHHHHhhhchHH
Q 032266 46 QRWELFRVACDQAEE 60 (144)
Q Consensus 46 qr~eLF~vACD~Aee 60 (144)
+-+-||+|||-||.+
T Consensus 281 EErRLlYVA~TRAk~ 295 (333)
T d1pjra2 281 EERRLAYVGITRAEE 295 (333)
T ss_dssp HHHHHHHHHHTTEEE
T ss_pred HHHHHHHHHHHHHHH
Confidence 456799999999975
No 7
>d1dosa_ c.1.10.2 (A:) Fructose-bisphosphate aldolase (FBP aldolase) {Escherichia coli [TaxId: 562]}
Probab=19.23 E-value=48 Score=25.82 Aligned_cols=61 Identities=20% Similarity=0.201 Sum_probs=35.2
Q ss_pred hHHHHHHHHHhhccccccccccccCCCCCCCCcCCCCCCchhHhHHHHHhhHHH------HhhhhhcCCCC
Q 032266 58 AEEFVESVKQRIGSECLVDEATGSLAGKSGQAATTGLPPISAVRLEQMSKAVRW------LVIELQHGGTG 122 (144)
Q Consensus 58 AeelVeSvrqRIgSeclVdeATg~~~~~~~~~aa~g~ppisavRleqmskAVrw------lvielq~g~g~ 122 (144)
|..|++-.-++-|-+|| =-+-|++||.-.+....--|-|---|++.+.+.+.- || +||++|
T Consensus 202 a~~~~~ef~~~tgvD~L-AvaiGt~HG~Yk~~~~~l~p~l~~~~~~~i~~~~~vp~~~~~LV---lHGgSG 268 (358)
T d1dosa_ 202 VDYAYTELSKISPRFTI-AASFGNVHGVYKAGNVVLTPTILRDSQEYVSKKHNLPHNSLNFV---FHGGSG 268 (358)
T ss_dssp HHHHHHHHHTTCSCEEE-ECCSSCCCSSCCCSCCCCCTHHHHHHHHHHHHHHTCCTTCSCEE---ECSCTT
T ss_pred HHHHHHHHhccCcccee-eeeccchhhhcCCCCccCCchhhHHHHHHHHHHhCCCCccccee---ccCCCC
Confidence 43344434444554443 457789998754322222455777778888777654 45 487765
No 8
>d1f46a_ d.129.4.1 (A:) Cell-division protein ZipA, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=19.03 E-value=78 Score=20.92 Aligned_cols=46 Identities=13% Similarity=0.128 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHhhhhh--hhhhhhhhHHHHHHHHHHHHHHHHhh
Q 032266 10 SAYKEFVAAAANVLEAKELS--VAQKTAATDAALENFKQRWELFRVAC 55 (144)
Q Consensus 10 ~AY~~fv~AaaavleAke~~--gg~ktaaTDaAle~fkqr~eLF~vAC 55 (144)
.+++.++..|..+-+.=.-. +..+..-|+..++.++++..-|..++
T Consensus 91 ~aFd~Ml~~a~~la~~l~g~l~D~~r~~lt~q~i~~~R~~i~e~e~~n 138 (139)
T d1f46a_ 91 QLFKLMLQSAQHIADEVGGVVLDDQRRMMTPQKLREYQDIIREVKDAN 138 (139)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEECTTSCBCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHhc
Confidence 47888888887776643222 56688889999999999998887654
No 9
>d1hx8a1 a.7.8.2 (A:167-299) AP180 (Lap) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=18.84 E-value=83 Score=21.19 Aligned_cols=55 Identities=15% Similarity=0.128 Sum_probs=37.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHhhhchHHHHHHHH
Q 032266 2 DNIVDALSSAYKEFVAAAANVLEAKELSVAQKTAATDAALENFKQRWELFRVACDQAEEFVESVK 66 (144)
Q Consensus 2 Ds~Vd~l~~AY~~fv~AaaavleAke~~gg~ktaaTDaAle~fkqr~eLF~vACD~AeelVeSvr 66 (144)
..+|..+-+-|..+=+..+++|+.=- . -...|+ +.=+++|+-++.|+|++++..+
T Consensus 46 ~llvkds~~lY~~inegiinLLd~fF--e---m~k~da-----~~al~iyk~~~~q~e~L~~f~~ 100 (133)
T d1hx8a1 46 MLLFRDLIRLFACYNDGIINLLEKYF--D---MNKKHA-----RDALDLYKKFLVRMDRVGEFLK 100 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT--T---CCSHHH-----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--c---cCHHHH-----HHHHHHHHHHHHHHHHHHHHHH
Confidence 45677788889999999999998421 1 111111 2224578888899998887765
No 10
>d1ps9a1 c.1.4.1 (A:1-330) 2,4-dienoyl-CoA reductase, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=18.41 E-value=27 Score=25.94 Aligned_cols=66 Identities=17% Similarity=0.253 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh----hhhh-----------hhhhhhHHHHHHHHHHHHHHHHhhhchHHHHHHHHHhh
Q 032266 5 VDALSSAYKEFVAAAANVLEAKE----LSVA-----------QKTAATDAALENFKQRWELFRVACDQAEEFVESVKQRI 69 (144)
Q Consensus 5 Vd~l~~AY~~fv~AaaavleAke----~~gg-----------~ktaaTDaAle~fkqr~eLF~vACD~AeelVeSvrqRI 69 (144)
.++++.-=++|+.||..+.+|.- .-++ .-+-+||.==-+|++|..+. .|.|+.||+++
T Consensus 133 ~~eI~~ii~~f~~aA~ra~~AGfDgVEIh~ahGyLl~qFlSp~~N~RtDeYGGs~enR~Rf~-------~Eii~air~~v 205 (330)
T d1ps9a1 133 HEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFA-------VEVVRAVRERV 205 (330)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHH-------HHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhCcCeeeeccchHHHHHHHHHhhcccccccCCccHhhhhHHH-------HHHHHHHHHHc
Confidence 46677777889999988877642 2122 23456776656788887774 68999999999
Q ss_pred cccccccc
Q 032266 70 GSECLVDE 77 (144)
Q Consensus 70 gSeclVde 77 (144)
|.+..|.-
T Consensus 206 g~d~~v~~ 213 (330)
T d1ps9a1 206 GNDFIIIY 213 (330)
T ss_dssp CSSSEEEE
T ss_pred CCCceeEe
Confidence 98876543
Done!