Query 032270
Match_columns 144
No_of_seqs 107 out of 348
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 19:20:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032270.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032270hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ydu_A AT5G01610; DUF538, stru 100.0 9.8E-45 3.4E-49 283.5 5.8 115 22-144 49-163 (170)
2 3r64_A NAD dependent benzaldeh 36.7 25 0.00085 30.3 3.4 31 12-42 176-210 (508)
3 3k9d_A LMO1179 protein, aldehy 35.2 28 0.00096 29.5 3.4 31 12-42 136-173 (464)
4 2nzc_A Hypothetical protein; s 30.0 13 0.00045 25.4 0.4 17 89-105 66-82 (86)
5 4dng_A Uncharacterized aldehyd 28.4 45 0.0015 28.4 3.6 30 13-42 172-205 (485)
6 3b4w_A Aldehyde dehydrogenase; 27.6 40 0.0014 28.9 3.2 31 12-42 174-207 (495)
7 2f9z_C Protein (chemotaxis met 27.0 1.1E+02 0.0039 22.6 5.3 35 25-63 108-148 (159)
8 1uzb_A 1-pyrroline-5-carboxyla 26.7 42 0.0014 28.9 3.1 30 13-42 202-234 (516)
9 2d4e_A 5-carboxymethyl-2-hydro 26.5 44 0.0015 28.8 3.2 31 12-42 190-223 (515)
10 1bxs_A Aldehyde dehydrogenase; 26.5 37 0.0013 29.2 2.7 30 13-42 188-220 (501)
11 1o04_A Aldehyde dehydrogenase, 26.4 37 0.0013 29.2 2.7 31 12-42 186-219 (500)
12 2w8n_A Succinate-semialdehyde 25.6 39 0.0013 28.9 2.7 31 12-42 174-207 (487)
13 3k2w_A Betaine-aldehyde dehydr 25.5 47 0.0016 28.5 3.2 30 13-42 177-209 (497)
14 3qth_A Uncharacterized protein 25.4 32 0.0011 26.3 1.9 15 25-39 144-158 (176)
15 2o2p_A Formyltetrahydrofolate 25.3 47 0.0016 28.8 3.2 31 12-42 206-239 (517)
16 1a4s_A ALDH, betaine aldehyde 25.3 47 0.0016 28.5 3.2 30 13-42 184-216 (503)
17 4e3x_A Delta-1-pyrroline-5-car 24.6 56 0.0019 28.7 3.6 31 12-42 227-260 (563)
18 3ros_A NAD-dependent aldehyde 22.9 52 0.0018 28.2 3.0 31 12-42 151-184 (484)
19 3rh9_A Succinate-semialdehyde 22.5 53 0.0018 28.3 3.0 31 12-42 175-208 (506)
20 2k8q_A Protein SHQ1; beta-sand 22.5 60 0.0021 23.8 2.8 18 47-64 63-80 (134)
21 2wme_A BADH, betaine aldehyde 21.9 51 0.0017 28.3 2.7 30 13-42 171-203 (490)
22 3ed6_A Betaine aldehyde dehydr 21.9 51 0.0018 28.5 2.7 30 13-42 199-231 (520)
23 3r31_A BADH, betaine aldehyde 21.0 59 0.002 28.1 2.9 31 12-42 178-211 (517)
24 4e4g_A Methylmalonate-semialde 20.9 68 0.0023 27.7 3.3 30 13-42 191-223 (521)
25 3i44_A Aldehyde dehydrogenase; 20.8 65 0.0022 27.6 3.2 30 13-42 190-222 (497)
26 3ju8_A Succinylglutamic semial 20.8 71 0.0024 27.2 3.4 31 12-42 167-200 (490)
27 3ty7_A Putative aldehyde dehyd 20.7 56 0.0019 27.7 2.7 31 12-42 167-200 (478)
28 2ve5_A BADH, betaine aldehyde 20.6 57 0.0019 27.7 2.7 30 13-42 171-203 (490)
29 2oqm_A Hypothetical protein; s 20.5 38 0.0013 26.3 1.4 15 25-39 163-177 (192)
No 1
>1ydu_A AT5G01610; DUF538, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG unknown function; NMR {Arabidopsis thaliana} SCOP: b.162.1.1
Probab=100.00 E-value=9.8e-45 Score=283.47 Aligned_cols=115 Identities=27% Similarity=0.502 Sum_probs=109.9
Q ss_pred cchhhHHHHHHhCCCCCCCcCCCCceEEEEEccCcEEEEEeCCeEEEEEcccceEEEEceEEEEEEccCceeeccceeEE
Q 032270 22 ICKQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWLKQKKRTEHKFRSIGRNVSYDTEVTGFVEDRRMRRLTGVKSK 101 (144)
Q Consensus 22 ~~~~ta~elL~~~glP~GLLPl~~V~~y~l~~~tG~~~v~l~~~c~~~F~~~~~~v~Y~~~ItG~i~~g~i~~L~GVkvK 101 (144)
.+.+++||||++||||+|||| ++|++|+||++||+|||+|+++|+|+|+. +|+|+|+++|||+|++|+|++|+||++|
T Consensus 49 ~~~~ta~elL~e~gLP~GLLP-~~V~~Y~l~~~tG~f~V~l~~~C~~~f~~-~~~v~Y~~~VtG~l~~GkI~~L~GVk~K 126 (170)
T 1ydu_A 49 KMQKPLPELLKEYDLPIGIFP-GDATNYEFDEETKKLTVLIPSICEVGYKD-SSVLKFTTTVTGHLEKGKLTDVEGIKTK 126 (170)
T ss_dssp TTTSSCHHHHHHHSCTTCTTT-SSSCEEEECTTTCSEEEECSSCEEEESTT-SSEEEECSEEEEEECSSCEEEEESCEEE
T ss_pred cccccHHHHHHHcCCCCCcCC-CCCeEEEEECCCcEEEEEeCCCEEEEecC-ccEEEEcCEEEEEEcCCcCccccCEEEE
Confidence 578899999999999999999 99999999999999999999999999985 9999999999999999999999999999
Q ss_pred EEEeeeeeeEEEEcCCCCCeEEEEeCCceeeeecccccccCCC
Q 032270 102 ELLIWVSISDIYTDAPDSKKITFANSTGLARSFPISAFELDEN 144 (144)
Q Consensus 102 ~lf~Wv~I~eI~vd~~~~~~i~F~~g~gisksfP~~~F~~~~~ 144 (144)
+| +|++|++|.|+ +++|+|++ |++++||+++|+.+|+
T Consensus 127 ~L-lWv~V~eI~v~---~~kI~F~v--Gi~ksfp~saFe~~~~ 163 (170)
T 1ydu_A 127 VM-IWVKVTSISTD---ASKVYFTA--GMKKSRSRDAYGVQRN 163 (170)
T ss_dssp SS-SEESCCCBEEC---SSSEECTT--SSSSCCCHHHHSSCCC
T ss_pred EE-EEeeEEEEEEe---CCEEEEEE--cCcccccHHHhcCCcC
Confidence 99 99999999995 89999998 5799999999999873
No 2
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=36.67 E-value=25 Score=30.31 Aligned_cols=31 Identities=16% Similarity=0.281 Sum_probs=25.2
Q ss_pred CCcEEEeccccchhhH----HHHHHhCCCCCCCcC
Q 032270 12 EGAEIYHGESICKQKS----HELLAEINLPKGLLP 42 (144)
Q Consensus 12 ~~aev~~g~~~~~~ta----~elL~~~glP~GLLP 42 (144)
-++.|...++.+..++ .++|++.|||.|++=
T Consensus 176 GN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~ 210 (508)
T 3r64_A 176 GNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVIS 210 (508)
T ss_dssp TCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEE
T ss_pred CCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEE
Confidence 3567888888877666 789999999999874
No 3
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=35.21 E-value=28 Score=29.50 Aligned_cols=31 Identities=13% Similarity=0.197 Sum_probs=24.7
Q ss_pred CCcEEEeccccchhhHH-------HHHHhCCCCCCCcC
Q 032270 12 EGAEIYHGESICKQKSH-------ELLAEINLPKGLLP 42 (144)
Q Consensus 12 ~~aev~~g~~~~~~ta~-------elL~~~glP~GLLP 42 (144)
-++.|..+++.+..++. ++|.+.|||.|++-
T Consensus 136 GN~VVlKps~~ap~t~~~l~~ll~~~~~~aG~P~gvv~ 173 (464)
T 3k9d_A 136 GNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAIS 173 (464)
T ss_dssp TCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEE
T ss_pred CCeEEEECCcchHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 35788889888877765 56799999999985
No 4
>2nzc_A Hypothetical protein; sturctural genomics, TM1266, structural genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.95A {Thermotoga maritima} SCOP: d.58.18.14
Probab=29.98 E-value=13 Score=25.41 Aligned_cols=17 Identities=18% Similarity=0.528 Sum_probs=14.4
Q ss_pred cCceeeccceeEEEEEe
Q 032270 89 DRRMRRLTGVKSKELLI 105 (144)
Q Consensus 89 ~g~i~~L~GVkvK~lf~ 105 (144)
.|+|.+|+||+||-...
T Consensus 66 ~gkLg~i~GV~vKt~~~ 82 (86)
T 2nzc_A 66 SGKLGQISGVRVKTVPL 82 (86)
T ss_dssp HHHHHTSTTEEEEEEEC
T ss_pred HHHhCCCCCEEEEEEEe
Confidence 48899999999998753
No 5
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=28.38 E-value=45 Score=28.36 Aligned_cols=30 Identities=13% Similarity=0.225 Sum_probs=23.6
Q ss_pred CcEEEeccccchhhH----HHHHHhCCCCCCCcC
Q 032270 13 GAEIYHGESICKQKS----HELLAEINLPKGLLP 42 (144)
Q Consensus 13 ~aev~~g~~~~~~ta----~elL~~~glP~GLLP 42 (144)
++.|...++.+..++ .++|.+.|||.|++-
T Consensus 172 N~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~ 205 (485)
T 4dng_A 172 NSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLN 205 (485)
T ss_dssp CEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEE
T ss_pred CEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEE
Confidence 467788888766555 678999999999874
No 6
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=27.61 E-value=40 Score=28.89 Aligned_cols=31 Identities=23% Similarity=0.352 Sum_probs=23.9
Q ss_pred CCcEEEeccccchhh---HHHHHHhCCCCCCCcC
Q 032270 12 EGAEIYHGESICKQK---SHELLAEINLPKGLLP 42 (144)
Q Consensus 12 ~~aev~~g~~~~~~t---a~elL~~~glP~GLLP 42 (144)
-++.|...++.+..+ ..++|++.|||.|++-
T Consensus 174 GN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~ 207 (495)
T 3b4w_A 174 GCTIVLKPAAETPLTANALAEVFAEVGLPEGVLS 207 (495)
T ss_dssp TCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEE
T ss_pred CCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEE
Confidence 356788888875554 4788999999999875
No 7
>2f9z_C Protein (chemotaxis methylation protein); bacterial chemotaxis, signal transduction, receptor deamidas aspartyl phosphatase, protein complex; 2.40A {Thermotoga maritima} SCOP: d.194.1.3
Probab=27.05 E-value=1.1e+02 Score=22.64 Aligned_cols=35 Identities=20% Similarity=0.327 Sum_probs=27.5
Q ss_pred hhHHHHHHhCCCC------CCCcCCCCceEEEEEccCcEEEEEeC
Q 032270 25 QKSHELLAEINLP------KGLLPLNDLVEVGYNRATGFVWLKQK 63 (144)
Q Consensus 25 ~ta~elL~~~glP------~GLLPl~~V~~y~l~~~tG~~~v~l~ 63 (144)
+-+.++|+++|+| .|--+ . .-.|+.+||.+|++.-
T Consensus 108 ~~a~~~L~~~gI~i~aeD~GG~~g-R---~i~f~~~tG~v~vk~~ 148 (159)
T 2f9z_C 108 EAVKKHLKDFGIKLLAEDTGGNRA-R---SVEYNIETGKLLVRKV 148 (159)
T ss_dssp HHHHHHHHHTTCCEEEEEECCSSC-E---EEEEETTTTEEEEECC
T ss_pred HHHHHHHHHCCCcEEEEeCCCCCC-c---EEEEECCCCEEEEEEc
Confidence 3688999999999 46666 3 3567899999999753
No 8
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=26.70 E-value=42 Score=28.92 Aligned_cols=30 Identities=17% Similarity=0.238 Sum_probs=23.8
Q ss_pred CcEEEeccccchhhH---HHHHHhCCCCCCCcC
Q 032270 13 GAEIYHGESICKQKS---HELLAEINLPKGLLP 42 (144)
Q Consensus 13 ~aev~~g~~~~~~ta---~elL~~~glP~GLLP 42 (144)
++.|...++.+..++ .++|++.|||.|++-
T Consensus 202 N~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~ 234 (516)
T 1uzb_A 202 NTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVN 234 (516)
T ss_dssp CEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEE
T ss_pred CeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEE
Confidence 577888888776554 678999999999864
No 9
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=26.53 E-value=44 Score=28.85 Aligned_cols=31 Identities=19% Similarity=0.307 Sum_probs=23.6
Q ss_pred CCcEEEeccccchhh---HHHHHHhCCCCCCCcC
Q 032270 12 EGAEIYHGESICKQK---SHELLAEINLPKGLLP 42 (144)
Q Consensus 12 ~~aev~~g~~~~~~t---a~elL~~~glP~GLLP 42 (144)
-++.|...++.+..+ ..++|++.|||.|++-
T Consensus 190 GN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~ 223 (515)
T 2d4e_A 190 GNTVVLKPAEWSPFTATKLAEILKEADLPPGVFN 223 (515)
T ss_dssp TCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEE
T ss_pred CCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEE
Confidence 356788888865554 4788999999999874
No 10
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=26.49 E-value=37 Score=29.24 Aligned_cols=30 Identities=13% Similarity=0.264 Sum_probs=23.4
Q ss_pred CcEEEeccccchhhH---HHHHHhCCCCCCCcC
Q 032270 13 GAEIYHGESICKQKS---HELLAEINLPKGLLP 42 (144)
Q Consensus 13 ~aev~~g~~~~~~ta---~elL~~~glP~GLLP 42 (144)
++.|...++.+..++ .++|++.|||.|++-
T Consensus 188 N~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~ 220 (501)
T 1bxs_A 188 NTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVN 220 (501)
T ss_dssp CEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEE
T ss_pred CeeeccCCCccHHHHHHHHHHHHHhCCCcceEE
Confidence 467788888775544 688999999999875
No 11
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=26.40 E-value=37 Score=29.22 Aligned_cols=31 Identities=13% Similarity=0.224 Sum_probs=23.7
Q ss_pred CCcEEEeccccchhh---HHHHHHhCCCCCCCcC
Q 032270 12 EGAEIYHGESICKQK---SHELLAEINLPKGLLP 42 (144)
Q Consensus 12 ~~aev~~g~~~~~~t---a~elL~~~glP~GLLP 42 (144)
-++.|...++.+..+ ..++|++.|||.|++-
T Consensus 186 GN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~ 219 (500)
T 1o04_A 186 GNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVN 219 (500)
T ss_dssp TCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEE
T ss_pred CCEEEEECCccChHHHHHHHHHHHHhCCCcCeEE
Confidence 346778888875554 4788999999999875
No 12
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=25.64 E-value=39 Score=28.87 Aligned_cols=31 Identities=13% Similarity=0.183 Sum_probs=23.7
Q ss_pred CCcEEEeccccchhhH---HHHHHhCCCCCCCcC
Q 032270 12 EGAEIYHGESICKQKS---HELLAEINLPKGLLP 42 (144)
Q Consensus 12 ~~aev~~g~~~~~~ta---~elL~~~glP~GLLP 42 (144)
-++.|...++.+..++ .++|++.|||.|++=
T Consensus 174 GN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~ 207 (487)
T 2w8n_A 174 GCTVVVKPAEDTPFSALALAELASQAGIPSGVYN 207 (487)
T ss_dssp TCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEE
T ss_pred CCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEE
Confidence 3567888887665554 688999999999874
No 13
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=25.47 E-value=47 Score=28.47 Aligned_cols=30 Identities=17% Similarity=0.267 Sum_probs=23.2
Q ss_pred CcEEEeccccchhhH---HHHHHhCCCCCCCcC
Q 032270 13 GAEIYHGESICKQKS---HELLAEINLPKGLLP 42 (144)
Q Consensus 13 ~aev~~g~~~~~~ta---~elL~~~glP~GLLP 42 (144)
++.|..+++.+..++ .++|.+.|||.|++-
T Consensus 177 N~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~ 209 (497)
T 3k2w_A 177 NTMVLKPTQETPLATTELGRIAKEAGLPDGVLN 209 (497)
T ss_dssp CEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEE
T ss_pred CEEEEECCCCChHHHHHHHHHHHHhCcCcCeEE
Confidence 467788887765554 578999999999874
No 14
>3qth_A Uncharacterized protein; DINB/YFIT-like putative metalloenzymes, structural genomics, center for structural genomics, JCSG; HET: MSE; 2.20A {Colwellia psychrerythraea}
Probab=25.43 E-value=32 Score=26.27 Aligned_cols=15 Identities=0% Similarity=-0.115 Sum_probs=13.8
Q ss_pred hhHHHHHHhCCCCCC
Q 032270 25 QKSHELLAEINLPKG 39 (144)
Q Consensus 25 ~ta~elL~~~glP~G 39 (144)
.|||.+|+..|.|.|
T Consensus 144 tTAYaILR~~GV~LG 158 (176)
T 3qth_A 144 SMVYAIAKNNGVSVT 158 (176)
T ss_dssp HHHHHHHHHTTCCCC
T ss_pred HHHHHHHHhcCCCcC
Confidence 489999999999998
No 15
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=25.35 E-value=47 Score=28.75 Aligned_cols=31 Identities=16% Similarity=0.277 Sum_probs=23.6
Q ss_pred CCcEEEeccccchhh---HHHHHHhCCCCCCCcC
Q 032270 12 EGAEIYHGESICKQK---SHELLAEINLPKGLLP 42 (144)
Q Consensus 12 ~~aev~~g~~~~~~t---a~elL~~~glP~GLLP 42 (144)
-++.|...++.+..+ ..++|++.|||.|++-
T Consensus 206 GNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~ 239 (517)
T 2o2p_A 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVN 239 (517)
T ss_dssp TCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEE
T ss_pred CCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEE
Confidence 346778888776554 4788999999999875
No 16
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=25.32 E-value=47 Score=28.55 Aligned_cols=30 Identities=20% Similarity=0.399 Sum_probs=23.2
Q ss_pred CcEEEeccccchhh---HHHHHHhCCCCCCCcC
Q 032270 13 GAEIYHGESICKQK---SHELLAEINLPKGLLP 42 (144)
Q Consensus 13 ~aev~~g~~~~~~t---a~elL~~~glP~GLLP 42 (144)
++.|...++.+..+ ..++|++.|||.|++-
T Consensus 184 N~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~ 216 (503)
T 1a4s_A 184 NAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVN 216 (503)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEE
T ss_pred CEEEEECCCCChHHHHHHHHHHHHhCCCcCeEE
Confidence 46778888865554 4789999999999874
No 17
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=24.64 E-value=56 Score=28.68 Aligned_cols=31 Identities=16% Similarity=0.297 Sum_probs=23.8
Q ss_pred CCcEEEeccccchhhH---HHHHHhCCCCCCCcC
Q 032270 12 EGAEIYHGESICKQKS---HELLAEINLPKGLLP 42 (144)
Q Consensus 12 ~~aev~~g~~~~~~ta---~elL~~~glP~GLLP 42 (144)
-++.|...++.+..++ .++|++.|||.|++=
T Consensus 227 GNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvn 260 (563)
T 4e3x_A 227 GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQ 260 (563)
T ss_dssp TCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEE
T ss_pred CCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEE
Confidence 4577888888766554 578999999999873
No 18
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=22.92 E-value=52 Score=28.17 Aligned_cols=31 Identities=10% Similarity=0.162 Sum_probs=23.9
Q ss_pred CCcEEEeccccchhhH---HHHHHhCCCCCCCcC
Q 032270 12 EGAEIYHGESICKQKS---HELLAEINLPKGLLP 42 (144)
Q Consensus 12 ~~aev~~g~~~~~~ta---~elL~~~glP~GLLP 42 (144)
-++.|..+++.+..++ .++|.+.|||.|++-
T Consensus 151 GN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~ 184 (484)
T 3ros_A 151 GNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLI 184 (484)
T ss_dssp TCCEEEECCTTCHHHHHHHHHHHHHHTCCTTSEE
T ss_pred CCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEE
Confidence 3577888888766554 578999999999874
No 19
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=22.49 E-value=53 Score=28.30 Aligned_cols=31 Identities=13% Similarity=0.298 Sum_probs=23.8
Q ss_pred CCcEEEeccccchhhH---HHHHHhCCCCCCCcC
Q 032270 12 EGAEIYHGESICKQKS---HELLAEINLPKGLLP 42 (144)
Q Consensus 12 ~~aev~~g~~~~~~ta---~elL~~~glP~GLLP 42 (144)
-++.|..+++.+..++ .++|.+.|||.|++-
T Consensus 175 GN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~ 208 (506)
T 3rh9_A 175 GCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVN 208 (506)
T ss_dssp TCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEE
T ss_pred CCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEE
Confidence 3577888888765554 578999999999874
No 20
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=22.46 E-value=60 Score=23.76 Aligned_cols=18 Identities=17% Similarity=0.217 Sum_probs=15.3
Q ss_pred eEEEEEccCcEEEEEeCC
Q 032270 47 VEVGYNRATGFVWLKQKK 64 (144)
Q Consensus 47 ~~y~l~~~tG~~~v~l~~ 64 (144)
..-.||.++|.|.|+|++
T Consensus 63 ~kA~YD~d~~~~~VtLpK 80 (134)
T 2k8q_A 63 STAQYDSKDECINVKVAK 80 (134)
T ss_dssp CEEEEETTTTEEEEEEEE
T ss_pred cceeEeccCCEEEEEEeC
Confidence 568899999999999965
No 21
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=21.90 E-value=51 Score=28.35 Aligned_cols=30 Identities=20% Similarity=0.407 Sum_probs=23.0
Q ss_pred CcEEEeccccchhh---HHHHHHhCCCCCCCcC
Q 032270 13 GAEIYHGESICKQK---SHELLAEINLPKGLLP 42 (144)
Q Consensus 13 ~aev~~g~~~~~~t---a~elL~~~glP~GLLP 42 (144)
++.|.+.++.+..+ ..++|++.|||.|++-
T Consensus 171 NtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~ 203 (490)
T 2wme_A 171 NAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFN 203 (490)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEE
T ss_pred CeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEE
Confidence 46788888766554 4578899999999874
No 22
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=21.90 E-value=51 Score=28.52 Aligned_cols=30 Identities=23% Similarity=0.433 Sum_probs=23.2
Q ss_pred CcEEEeccccchhhH---HHHHHhCCCCCCCcC
Q 032270 13 GAEIYHGESICKQKS---HELLAEINLPKGLLP 42 (144)
Q Consensus 13 ~aev~~g~~~~~~ta---~elL~~~glP~GLLP 42 (144)
++.|...++.+..++ .++|++.|||.|++-
T Consensus 199 NtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvn 231 (520)
T 3ed6_A 199 CSLVMKPSEITPLTTIRVFELMEEVGFPKGTIN 231 (520)
T ss_dssp CEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEE
T ss_pred CEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEE
Confidence 567788877665554 678999999999874
No 23
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=20.99 E-value=59 Score=28.11 Aligned_cols=31 Identities=29% Similarity=0.407 Sum_probs=23.4
Q ss_pred CCcEEEeccccchhh---HHHHHHhCCCCCCCcC
Q 032270 12 EGAEIYHGESICKQK---SHELLAEINLPKGLLP 42 (144)
Q Consensus 12 ~~aev~~g~~~~~~t---a~elL~~~glP~GLLP 42 (144)
-++.|..+++.+..+ ..++|.+.|||.|++-
T Consensus 178 GN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~ 211 (517)
T 3r31_A 178 GNAMVFKPSENTPLGALKIAEILIEAGLPKGLFN 211 (517)
T ss_dssp TCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEE
T ss_pred CCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEE
Confidence 356778887765554 4678999999999874
No 24
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=20.91 E-value=68 Score=27.75 Aligned_cols=30 Identities=30% Similarity=0.315 Sum_probs=23.1
Q ss_pred CcEEEeccccchhh---HHHHHHhCCCCCCCcC
Q 032270 13 GAEIYHGESICKQK---SHELLAEINLPKGLLP 42 (144)
Q Consensus 13 ~aev~~g~~~~~~t---a~elL~~~glP~GLLP 42 (144)
++.|...++.+..+ ..++|.+.|||.|++-
T Consensus 191 N~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~ 223 (521)
T 4e4g_A 191 NAFILKPSERDPSVPIRLAELMIEAGLPAGILN 223 (521)
T ss_dssp CEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEE
T ss_pred CEEEEECCCcchHHHHHHHHHHHHhCCCcCeEE
Confidence 56788888776554 4578999999999874
No 25
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=20.81 E-value=65 Score=27.64 Aligned_cols=30 Identities=23% Similarity=0.354 Sum_probs=22.8
Q ss_pred CcEEEeccccchhh---HHHHHHhCCCCCCCcC
Q 032270 13 GAEIYHGESICKQK---SHELLAEINLPKGLLP 42 (144)
Q Consensus 13 ~aev~~g~~~~~~t---a~elL~~~glP~GLLP 42 (144)
++.|...++.+..+ ..++|.+.|||.|++=
T Consensus 190 N~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvn 222 (497)
T 3i44_A 190 CTMVLKPSEIAPLSAMLFAEILDEAALPSGVFN 222 (497)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEE
T ss_pred CEEEEECCcccHHHHHHHHHHHHHhCcCCCeEE
Confidence 56777877765554 4678999999999874
No 26
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=20.79 E-value=71 Score=27.23 Aligned_cols=31 Identities=13% Similarity=0.313 Sum_probs=23.7
Q ss_pred CCcEEEeccccchhhH---HHHHHhCCCCCCCcC
Q 032270 12 EGAEIYHGESICKQKS---HELLAEINLPKGLLP 42 (144)
Q Consensus 12 ~~aev~~g~~~~~~ta---~elL~~~glP~GLLP 42 (144)
-++.|...++.+..++ .++|.+.|||.|++-
T Consensus 167 GN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~ 200 (490)
T 3ju8_A 167 GNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLN 200 (490)
T ss_dssp TCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEE
T ss_pred CCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEE
Confidence 3567888888766655 568899999999874
No 27
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=20.69 E-value=56 Score=27.66 Aligned_cols=31 Identities=13% Similarity=0.278 Sum_probs=23.6
Q ss_pred CCcEEEeccccchhh---HHHHHHhCCCCCCCcC
Q 032270 12 EGAEIYHGESICKQK---SHELLAEINLPKGLLP 42 (144)
Q Consensus 12 ~~aev~~g~~~~~~t---a~elL~~~glP~GLLP 42 (144)
-++.|...++.+..+ ..++|++.|||.|++-
T Consensus 167 GN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~ 200 (478)
T 3ty7_A 167 GSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFN 200 (478)
T ss_dssp TCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEE
T ss_pred CCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEE
Confidence 357788888776554 4578999999999874
No 28
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=20.55 E-value=57 Score=27.73 Aligned_cols=30 Identities=20% Similarity=0.442 Sum_probs=23.0
Q ss_pred CcEEEeccccchhhH---HHHHHhCCCCCCCcC
Q 032270 13 GAEIYHGESICKQKS---HELLAEINLPKGLLP 42 (144)
Q Consensus 13 ~aev~~g~~~~~~ta---~elL~~~glP~GLLP 42 (144)
++.|...++.+..++ .++|.+.|||.|++=
T Consensus 171 N~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~ 203 (490)
T 2ve5_A 171 NAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFN 203 (490)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEE
T ss_pred CEEEEECCCcchHHHHHHHHHHHHhCcCcCeEE
Confidence 467788887665544 578999999999874
No 29
>2oqm_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.83A {Shewanella denitrificans} SCOP: a.213.1.3
Probab=20.49 E-value=38 Score=26.27 Aligned_cols=15 Identities=13% Similarity=0.193 Sum_probs=13.4
Q ss_pred hhHHHHHHhCCCCCC
Q 032270 25 QKSHELLAEINLPKG 39 (144)
Q Consensus 25 ~ta~elL~~~glP~G 39 (144)
.|||.+|+..|.|.|
T Consensus 163 tTAYaILR~~GV~LG 177 (192)
T 2oqm_A 163 TTAYGILRHNGVEVG 177 (192)
T ss_dssp HHHHHHHHHHTCCCC
T ss_pred HHHHHHHHhcCCCCC
Confidence 489999999999988
Done!