BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032271
MICFWFCVIETKLFVNVQVYVDGMPALSSKERKATLREFYAIIYPSLRQLESEFSELEDN
SKRDQCSEISSRKRVEERRKLSDKDLDRNDECGICMENCTKMVTRKHFSLERIPDKYFSH
NGLIMNYRNARSQSCLFAVAAYRE

High Scoring Gene Products

Symbol, full name Information P value
AIRP2
ABA Insensitive RING Protein 2
protein from Arabidopsis thaliana 3.7e-16
AT1G13195 protein from Arabidopsis thaliana 5.4e-15
AT5G58787 protein from Arabidopsis thaliana 2.3e-14
AT1G24440 protein from Arabidopsis thaliana 6.2e-14

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032271
        (144 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2149750 - symbol:AIRP2 "ABA Insensitive RING P...   201  3.7e-16   1
TAIR|locus:505006120 - symbol:AT1G13195 species:3702 "Ara...   190  5.4e-15   1
TAIR|locus:505006703 - symbol:AT5G58787 "AT5G58787" speci...   184  2.3e-14   1
TAIR|locus:2024026 - symbol:AT1G24440 species:3702 "Arabi...   180  6.2e-14   1


>TAIR|locus:2149750 [details] [associations]
            symbol:AIRP2 "ABA Insensitive RING Protein 2"
            species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0015996 "chlorophyll
            catabolic process" evidence=RCA] InterPro:IPR001841 PROSITE:PS50089
            SMART:SM00184 Prosite:PS00518 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
            EMBL:AL161946 HOGENOM:HOG000241127 ProtClustDB:CLSN2685154
            EMBL:AY050835 EMBL:AY091165 EMBL:DQ059129 IPI:IPI00537853
            PIR:T48173 RefSeq:NP_195772.1 UniGene:At.22936
            ProteinModelPortal:Q9M022 SMR:Q9M022 STRING:Q9M022
            EnsemblPlants:AT5G01520.1 GeneID:831747 KEGG:ath:AT5G01520
            TAIR:At5g01520 InParanoid:Q9M022 OMA:RNWRARS PhylomeDB:Q9M022
            Genevestigator:Q9M022 Uniprot:Q9M022
        Length = 242

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 46/122 (37%), Positives = 73/122 (59%)

Query:    18 QVYVDGMPALSSKERKATLREFYAIIYPSLRQLESEFSELEDNSKRDQCSEISSRKRVEE 77
             + YVDG   +S  ERK ++REFY +++PSL QL    +++E+  +++ C +   +K   +
Sbjct:    72 KAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQKEICDKRYRKKDRTD 131

Query:    78 RRKLSDKDLDRNDECGICMENCTKMVTRKHFSLERIPDKYFSHNGLIMNYRN--ARSQSC 135
             + K+S+ DL+R +ECGIC+E   K+V         +P    +H+  I  YRN  ARSQSC
Sbjct:   132 KGKMSEIDLEREEECGICLEIRNKVV---------LPT--CNHSMCINCYRNWRARSQSC 180

Query:   136 LF 137
              F
Sbjct:   181 PF 182


>TAIR|locus:505006120 [details] [associations]
            symbol:AT1G13195 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
            evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=RCA]
            InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC007357
            InterPro:IPR017907 HOGENOM:HOG000241127 ProtClustDB:CLSN2685154
            UniGene:At.27310 UniGene:At.48183 EMBL:AY087531 EMBL:BT024484
            EMBL:AK226915 IPI:IPI00548949 PIR:D86266 RefSeq:NP_563922.1
            ProteinModelPortal:Q9SAF3 SMR:Q9SAF3 EnsemblPlants:AT1G13195.1
            GeneID:837878 KEGG:ath:AT1G13195 TAIR:At1g13195 InParanoid:Q9SAF3
            OMA:CLIPRYL PhylomeDB:Q9SAF3 Genevestigator:Q9SAF3 Uniprot:Q9SAF3
        Length = 260

 Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
 Identities = 54/138 (39%), Positives = 72/138 (52%)

Query:     7 CVIETKL-FVNVQVYV---DGMPALSSKERKATLREFYAIIYPSLRQLESEFSELEDNSK 62
             C+I   L   +V VY    DG P L++  RKAT+ EFY +I PSL+ L S   ELE    
Sbjct:    72 CLIPRYLNLFHVLVYKVQSDGQPKLTTHGRKATISEFYGVILPSLQLLHSNLDELETTDI 131

Query:    63 RDQCSEISSRKRVEERR-KLSDKDLDRNDECGICMENCTKMVTRKHFSLERIPDKYFSHN 121
                   +S +   E R  + S+  L+R +ECGIC+E CTKMV         +P+    H+
Sbjct:   132 GFDLKRLSKKITKEARSSRFSNAGLEREEECGICLETCTKMV---------LPN--CCHS 180

Query:   122 GLIMNYRN--ARSQSCLF 137
               I  YRN   +SQSC F
Sbjct:   181 MCIKCYRNWNLKSQSCPF 198


>TAIR|locus:505006703 [details] [associations]
            symbol:AT5G58787 "AT5G58787" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
            evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
            Prosite:PS00518 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
            InterPro:IPR017907 eggNOG:NOG273394 EMBL:AY088898 EMBL:BT005412
            EMBL:AK118993 IPI:IPI00519998 RefSeq:NP_568885.1 UniGene:At.29261
            ProteinModelPortal:Q8L8N5 SMR:Q8L8N5 STRING:Q8L8N5
            EnsemblPlants:AT5G58787.1 GeneID:835995 KEGG:ath:AT5G58787
            TAIR:At5g58787 HOGENOM:HOG000241127 InParanoid:Q8L8N5 OMA:DWRGRSQ
            PhylomeDB:Q8L8N5 ProtClustDB:CLSN2685154 ArrayExpress:Q8L8N5
            Genevestigator:Q8L8N5 Uniprot:Q8L8N5
        Length = 242

 Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 44/120 (36%), Positives = 73/120 (60%)

Query:    20 YVDGMPALSSKERKATLREFYAIIYPSLRQLESEFSELEDNSKRDQCSEISSRKRVEERR 79
             Y DG   +S  ERKA++REF A+I PSL QL+   ++++D+ +++ C     R R ++  
Sbjct:    75 YADGKTTMSVYERKASIREFQAVILPSLSQLQRGVTDIDDSKQKEVCK---MRYRKKDES 131

Query:    80 KLSDKDLDRNDECGICMENCTKMVTRKHFSLERIPDKYFSHNGLIMNYRN--ARSQSCLF 137
             ++S+ +++R +ECGICME  +K+V         +P+   +H+  I  YR+   RSQSC F
Sbjct:   132 EMSEIEIEREEECGICMEMNSKVV---------LPN--CTHSLCIKCYRDWRGRSQSCPF 180


>TAIR|locus:2024026 [details] [associations]
            symbol:AT1G24440 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
            Prosite:PS00518 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
            EMBL:AC000103 InterPro:IPR017907 HOGENOM:HOG000241127
            ProtClustDB:CLSN2685154 EMBL:AY085533 EMBL:BT000927 IPI:IPI00547120
            PIR:E86378 RefSeq:NP_564218.1 UniGene:At.26915
            ProteinModelPortal:Q9FYL9 SMR:Q9FYL9 EnsemblPlants:AT1G24440.1
            GeneID:839060 KEGG:ath:AT1G24440 TAIR:At1g24440 eggNOG:NOG314445
            InParanoid:Q9FYL9 OMA:CRGSIKR PhylomeDB:Q9FYL9 ArrayExpress:Q9FYL9
            Genevestigator:Q9FYL9 Uniprot:Q9FYL9
        Length = 251

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 50/131 (38%), Positives = 71/131 (54%)

Query:    14 FVNVQVY---VDGMPALSSKERKATLREFYAIIYPSLRQLESEFSELEDNSKRDQCSEIS 70
             F ++ +Y    DG    S   RKAT+REFY +I PSL +L   F++L D S      +  
Sbjct:    72 FFHILIYKVRADGRWNRSRYGRKATIREFYGVILPSLERLHINFADLPDESLWYPNPKAI 131

Query:    71 SRKR--VEERRKLSDKDLDRNDECGICMENCTKMVTRKHFSLERIPDKYFSHNGLIMNYR 128
             ++K+  +E  R ++  DL+R DECGIC+E CTKMV         +P+    H   I  YR
Sbjct:   132 TKKQYDIEGSRYMNSIDLEREDECGICLEPCTKMV---------LPN--CCHAMCIKCYR 180

Query:   129 N--ARSQSCLF 137
             N   +S+SC F
Sbjct:   181 NWNTKSESCPF 191


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.134   0.401    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      144       144   0.00091  102 3  11 22  0.40    31
                                                     30  0.48    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  572 (61 KB)
  Total size of DFA:  142 KB (2087 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.91u 0.10s 20.01t   Elapsed:  00:00:01
  Total cpu time:  19.91u 0.10s 20.01t   Elapsed:  00:00:01
  Start:  Fri May 10 23:51:18 2013   End:  Fri May 10 23:51:19 2013

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