Query 032274
Match_columns 144
No_of_seqs 160 out of 935
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 19:25:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032274.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032274hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jst_A Putative pterin-4-alpha 99.8 1.1E-18 3.7E-23 125.1 6.3 64 79-144 3-69 (97)
2 1ru0_A DCOH-like protein dcohm 99.7 7.3E-19 2.5E-23 127.7 5.0 69 73-144 2-75 (105)
3 2v6u_A Pterin-4A-carbinolamine 99.7 2.6E-18 8.8E-23 124.6 6.6 65 78-144 5-72 (104)
4 3hxa_A Pterin-4-alpha-carbinol 99.7 1.9E-18 6.6E-23 125.3 5.8 65 78-144 4-73 (104)
5 2ebb_A Pterin-4-alpha-carbinol 99.7 5.7E-18 2E-22 122.3 6.7 62 80-144 1-65 (101)
6 1usm_A DCOH, hepatocyte nuclea 99.5 3.5E-14 1.2E-18 98.3 5.3 48 95-144 1-51 (80)
7 3lqv_P Splicing factor 3B subu 46.3 14 0.00047 22.2 2.3 19 79-99 20-38 (39)
8 1uw4_A UPF3X; nonsense mediate 39.7 64 0.0022 21.9 5.3 49 79-127 10-65 (91)
9 1ofd_A Ferredoxin-dependent gl 28.5 1E+02 0.0036 31.0 6.5 115 8-138 480-598 (1520)
10 2fho_A Spliceosomal protein SF 26.3 29 0.001 21.5 1.5 21 79-101 19-39 (47)
11 3vtf_A UDP-glucose 6-dehydroge 25.5 32 0.0011 29.8 2.1 17 121-137 239-256 (444)
12 4f0h_B Ribulose bisphosphate c 22.1 21 0.00072 26.7 0.3 23 78-100 10-34 (138)
13 3zxw_B Ribulose bisphosphate c 21.7 17 0.00058 26.5 -0.3 23 78-100 15-39 (118)
14 1svd_M Ribulose bisphosphate c 21.6 22 0.00075 25.5 0.3 23 78-100 18-42 (110)
15 4ev1_A Anabena TIC22; TIC22 fo 20.8 1.3E+02 0.0046 24.1 4.8 48 82-129 2-63 (252)
No 1
>3jst_A Putative pterin-4-alpha-carbinolamine dehydratase; lyase, structural genomics, seattle structural genomics CENT infectious disease, ssgcid; 2.10A {Brucella melitensis} SCOP: d.74.1.0
Probab=99.75 E-value=1.1e-18 Score=125.10 Aligned_cols=64 Identities=19% Similarity=0.309 Sum_probs=59.6
Q ss_pred CCCCCHHHHHhhCCCCCCCeEeccCCcceEEEEEEcCChHHHHHHHHHHHHHHHHcC---CeeeccCCC
Q 032274 79 LRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEG---NLHLVFGSL 144 (144)
Q Consensus 79 ~~~Ls~~EI~~lL~~LpGW~l~~~~G~~~L~R~f~FkdF~~Al~FvN~VA~lAE~eg---DI~l~Yg~l 144 (144)
+++||++||+++|++||||++.++ ..+|+|+|+|+||.+|++|+|+||.+||++| ||+++||+|
T Consensus 3 ~~~Ls~~ei~~~L~~l~gW~~~~~--~~~l~r~f~f~~f~~a~~f~~~Va~~Ae~~~HHPdi~~~y~~V 69 (97)
T 3jst_A 3 RNRLTESEMNEALRALDGWQKVDG--REAITRSFKFKDFSTAFGFMAQAALYAEKLDHHPEWFNAYNRV 69 (97)
T ss_dssp CSCCCHHHHHHHHHTSTTCEECTT--SSCEEEEEECSSHHHHHHHHHHHHHHHHHHTCCCEEEEETTEE
T ss_pred CCCCCHHHHHHHhhcCCCCeEeCC--CCeEEEEEEeCCHHHHHHHHHHHHHHHHHhCCCCeEEEeCCEE
Confidence 578999999999999999999853 3589999999999999999999999999999 999999975
No 2
>1ru0_A DCOH-like protein dcohm; alpha and beta structure, lyase; 1.60A {Mus musculus} SCOP: d.74.1.1
Probab=99.75 E-value=7.3e-19 Score=127.68 Aligned_cols=69 Identities=19% Similarity=0.372 Sum_probs=60.4
Q ss_pred cCCCCCCCCCCHHHHHhhCCCC--CCCeEeccCCcceEEEEEEcCChHHHHHHHHHHHHHHHHcC---CeeeccCCC
Q 032274 73 PCDTKDLRPMAEDSAKHLMPKV--VGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEG---NLHLVFGSL 144 (144)
Q Consensus 73 PC~g~~~~~Ls~~EI~~lL~~L--pGW~l~~~~G~~~L~R~f~FkdF~~Al~FvN~VA~lAE~eg---DI~l~Yg~l 144 (144)
.|++ ++++||++||+++|++| |||++.++ ..+|+|+|+|+||.+|++|||+||.+||++| ||+++||+|
T Consensus 2 ~~~~-~~~~Ls~~ei~~~L~~l~~~gW~~~~~--~~~i~r~f~F~~f~~a~~F~~~Va~~Ae~~~HHPdi~~~y~~V 75 (105)
T 1ru0_A 2 SMSS-DAQWLTAEERDQLIPGLKAAGWSELSE--RDAIYKEFSFKNFNQAFGFMSRVALQAEKMNHHPEWFNVYNKV 75 (105)
T ss_dssp -----CCSBCCHHHHHHHHHHHHHTTCEECSS--SSCEEEEEECSSHHHHHHHHHHHHHHHHHHTCCCEEEEETTEE
T ss_pred CCCC-CCCCCCHHHHHHHHHhCCCCCCeEECC--CCeEEEEEEeCCHHHHHHHHHHHHHHHHHhCCCCcEEEeCCEE
Confidence 4675 78999999999999999 89999753 2489999999999999999999999999999 999999975
No 3
>2v6u_A Pterin-4A-carbinolamine dehydratase; lyase, enzyme; 1.6A {Toxoplasma gondii} PDB: 2v6s_A 2v6t_A*
Probab=99.74 E-value=2.6e-18 Score=124.58 Aligned_cols=65 Identities=18% Similarity=0.270 Sum_probs=60.0
Q ss_pred CCCCCCHHHHHhhCCCCCCCeEeccCCcceEEEEEEcCChHHHHHHHHHHHHHHHHcC---CeeeccCCC
Q 032274 78 DLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEG---NLHLVFGSL 144 (144)
Q Consensus 78 ~~~~Ls~~EI~~lL~~LpGW~l~~~~G~~~L~R~f~FkdF~~Al~FvN~VA~lAE~eg---DI~l~Yg~l 144 (144)
..++||++||+++|++||||++.++ +.+|+|+|+|+||.+|++|||+||.+||++| ||+++||+|
T Consensus 5 ~~~~Ls~~ei~~~L~~l~gW~~~~~--~~~i~r~f~F~~f~~a~~F~~~Va~~Ae~~~HHPdi~~~y~~V 72 (104)
T 2v6u_A 5 ARLAANSARLLQLHKTVPQWHLTDG--HLSIKRKFQFSDFNEAWGFMSRVALYADKVDHHPNWYNVYNTV 72 (104)
T ss_dssp CCCCTTCHHHHHHHTTSTTSEECGG--GCCEEEEEECSSHHHHHHHHHHHHHHHHHHTCCCEEEEETTEE
T ss_pred cCCCCCHHHHHHHhhcCCCCeEeCC--cCeEEEEEEeCCHHHHHHHHHHHHHHHHHhCCCCcEEEeCCEE
Confidence 3578999999999999999999863 3589999999999999999999999999999 999999975
No 4
>3hxa_A Pterin-4-alpha-carbinolamine dehydratase; alpha and beta structure, lyase, nucleus, tetrahydrobiopteri biosynthesis; 1.80A {Rattus norvegicus} SCOP: d.74.1.1 PDB: 1dco_A 1dch_A 1dcp_A* 1f93_A
Probab=99.74 E-value=1.9e-18 Score=125.35 Aligned_cols=65 Identities=18% Similarity=0.405 Sum_probs=59.7
Q ss_pred CCCCCCHHHHHhhCCCC--CCCeEeccCCcceEEEEEEcCChHHHHHHHHHHHHHHHHcC---CeeeccCCC
Q 032274 78 DLRPMAEDSAKHLMPKV--VGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEG---NLHLVFGSL 144 (144)
Q Consensus 78 ~~~~Ls~~EI~~lL~~L--pGW~l~~~~G~~~L~R~f~FkdF~~Al~FvN~VA~lAE~eg---DI~l~Yg~l 144 (144)
++++||++||+++|++| |||++.+++ .+|+|+|+|+||.+|++|||+||.+||++| ||+++||+|
T Consensus 4 ~~~~Ls~~ei~~~L~~L~~~gW~~~~~~--~~l~r~f~F~~f~~a~~F~~~Va~~AE~~~HHPdi~~~y~~V 73 (104)
T 3hxa_A 4 KAHRLSAEERDQLLPNLRAVGWNELEGR--DAIFKQFHFKDFNRAFGFMSRVALQAEKLDHHPEWFNVYNKV 73 (104)
T ss_dssp -CCCCCHHHHHHHSHHHHTTTCEECSSS--SCEEEEEECSSHHHHHHHHHHHHHHHHHHTCCCEEEEETTEE
T ss_pred CCccCCHHHHHHHHhhCCCCCCEEecCC--CeEEEEEEeCCHHHHHHHHHHHHHHHHHhCCCCeEEEeCCEE
Confidence 68999999999999999 899997532 489999999999999999999999999999 999999975
No 5
>2ebb_A Pterin-4-alpha-carbinolamine dehydratase; coenzyme biosyntheses, GK1984, structural genomics, NPPSFA; 1.60A {Geobacillus kaustophilus}
Probab=99.72 E-value=5.7e-18 Score=122.29 Aligned_cols=62 Identities=16% Similarity=0.442 Sum_probs=57.7
Q ss_pred CCCCHHHHHhhCCCCCCCeEeccCCcceEEEEEEcCChHHHHHHHHHHHHHHHHcC---CeeeccCCC
Q 032274 80 RPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEG---NLHLVFGSL 144 (144)
Q Consensus 80 ~~Ls~~EI~~lL~~LpGW~l~~~~G~~~L~R~f~FkdF~~Al~FvN~VA~lAE~eg---DI~l~Yg~l 144 (144)
.+||++||+++|++||||++.+ |. +|+|+|+|+||.+|++|||+||.+||++| ||+++||+|
T Consensus 1 ~~Ls~~ei~~~L~~l~gW~~~~--~~-~i~r~f~F~~f~~a~~F~~~Va~~Ae~~~HHPdi~~~y~~V 65 (101)
T 2ebb_A 1 MRLTEEEVQALLEKADGWKLAD--ER-WIVKKYRFQDYLQGIEFVRRIAAISENANHHPFISIDYKLI 65 (101)
T ss_dssp CCCCHHHHHHHHHTSTTCEEET--TT-EEEEEEECSSHHHHHHHHHHHHHHHHHTTCCCEEEEETTEE
T ss_pred CCCCHHHHHHHhhcCCCCeECC--CC-CEEEEEEeCCHHHHHHHHHHHHHHHHHhCCCCcEEEeCCEE
Confidence 3799999999999999999986 32 69999999999999999999999999999 999999975
No 6
>1usm_A DCOH, hepatocyte nuclear factor 1-alpha; transcriptional stimulator, dimerization cofactor, dehydratase, 4A-carbinolamine dehydratase; 1.2A {Thermus thermophilus} SCOP: d.74.1.1 PDB: 1uso_A
Probab=99.48 E-value=3.5e-14 Score=98.27 Aligned_cols=48 Identities=21% Similarity=0.490 Sum_probs=42.8
Q ss_pred CCCeEeccCCcceEEEEEEcCChHHHHHHHHHHHHHHHHcC---CeeeccCCC
Q 032274 95 VGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEG---NLHLVFGSL 144 (144)
Q Consensus 95 pGW~l~~~~G~~~L~R~f~FkdF~~Al~FvN~VA~lAE~eg---DI~l~Yg~l 144 (144)
|||++.+ |..+|+|+|+|+||.+|++|||+||.+||++| ||+++||+|
T Consensus 1 ~gW~~~~--~~~~i~r~f~F~~f~~a~~F~~~Va~~Ae~~~HHPdi~~~y~~V 51 (80)
T 1usm_A 1 MDWEERE--NLKRLVKTFAFPNFREALDFANRVGALAERENHHPRLTVEWGRV 51 (80)
T ss_dssp CCCEEC-----CCEEEEEECSSHHHHHHHHHHHHHHHHHHTCCCEEEEETTEE
T ss_pred CCCeEeC--CccEEEEEEEeCCHHHHHHHHHHHHHHHHHhCCCCcEEEeCCEE
Confidence 7999875 33589999999999999999999999999999 999999975
No 7
>3lqv_P Splicing factor 3B subunit 1; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} PDB: 2f9d_P 2f9j_P
Probab=46.33 E-value=14 Score=22.18 Aligned_cols=19 Identities=21% Similarity=0.709 Sum_probs=15.9
Q ss_pred CCCCCHHHHHhhCCCCCCCeE
Q 032274 79 LRPMAEDSAKHLMPKVVGWDL 99 (144)
Q Consensus 79 ~~~Ls~~EI~~lL~~LpGW~l 99 (144)
-.|||++|+..+|+ +|.++
T Consensus 20 NrpltDEeLD~mLP--~GYkI 38 (39)
T 3lqv_P 20 NRPLSDEELDAMFP--EGYKV 38 (39)
T ss_dssp TCCCCHHHHHHTCC--SSEEE
T ss_pred cCCCCHHHHHHhCC--CCccc
Confidence 46999999999998 47765
No 8
>1uw4_A UPF3X; nonsense mediated mRNA decay protein, RNA-binding protein, N domain, MIF4G domain; 1.95A {Homo sapiens} SCOP: d.58.7.4
Probab=39.67 E-value=64 Score=21.94 Aligned_cols=49 Identities=4% Similarity=0.058 Sum_probs=33.5
Q ss_pred CCCCCHHHHHhhCCCCCC--C-eEeccC---CcceEEEEE-EcCChHHHHHHHHHH
Q 032274 79 LRPMAEDSAKHLMPKVVG--W-DLVNEN---GILKLNRSL-KVKSFTKGLELFKLV 127 (144)
Q Consensus 79 ~~~Ls~~EI~~lL~~LpG--W-~l~~~~---G~~~L~R~f-~FkdF~~Al~FvN~V 127 (144)
++.||++|..+.|..++. | .....+ +...-.|.| .|++..+.++|.+.+
T Consensus 10 PP~LteeeF~~~l~~~~~~d~~~fv~G~~s~~~~~~SRaYi~f~~~e~v~~f~~~~ 65 (91)
T 1uw4_A 10 PPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRF 65 (91)
T ss_dssp CTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHH
T ss_pred CCCCCHHHHHHHhcCcccceEEEEeCCccCCCCCcceEEEEEeCCHHHHHHHHHHh
Confidence 467999999999987752 3 232211 223445555 899999999998775
No 9
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=28.51 E-value=1e+02 Score=30.95 Aligned_cols=115 Identities=12% Similarity=0.046 Sum_probs=72.0
Q ss_pred ccccccCCCCCccchHHHhhhcCCCccceeeeeccCccceeccccccccccccccccccccCCcccCCCCCCCCCCHHHH
Q 032274 8 HLLSLSRPQVPLRSVFESLFARNGRSNIRVTEIFQNRVGLFLSRNSLYGFRTFCTGQDLTTKKCVPCDTKDLRPMAEDSA 87 (144)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~eLs~k~C~PC~g~~~~~Ls~~EI 87 (144)
||-.||.-.-+|..-|.|+|+-=+ |+.++-| -.++-|| .+...+ ...++.+-...+|.-..= ..|-|+.+|.
T Consensus 480 plavls~~~~~l~~yFkQ~fAqVT--NPpiD~i-RE~~v~S-l~~~~G---~~~n~l~~~~~~~~~~~l-~~Pil~~~~~ 551 (1520)
T 1ofd_A 480 PLAVLSHKPRLLYDYFKQRFAQVT--NPPIDPL-RENLVMS-LAMFLG---KRGNLLEPKAESARTIKL-RSPLVNEVEL 551 (1520)
T ss_dssp CCTTTCSSCCCGGGGEEECCCCSS--SCCCCTT-TTGGGCB-CCEEES---CCCCSSSCCGGGGCEEEE-SCSBCCHHHH
T ss_pred hhhhhcCCCccHHHHHHHhhhhcc--CCCccch-hhhheee-cccccc---CCCCCCCCCcCCCCEEEe-CCCccCHHHH
Confidence 666777766788899999997322 3444443 2233344 445543 122333334556654432 4578999999
Q ss_pred HhhCCCCCCCeEeccCCcceEEEEEEcC---ChHHHHHHHHHHHHHHHHcC-Cee
Q 032274 88 KHLMPKVVGWDLVNENGILKLNRSLKVK---SFTKGLELFKLVADVAEAEG-NLH 138 (144)
Q Consensus 88 ~~lL~~LpGW~l~~~~G~~~L~R~f~Fk---dF~~Al~FvN~VA~lAE~eg-DI~ 138 (144)
+++.. ++|+.. .|.-+|... ...+|++=+-+=|+.|-+.| .|.
T Consensus 552 ~~~~~--~~~~~~------~~~~~~~~~g~~~l~~al~~l~~~a~~av~~g~~il 598 (1520)
T 1ofd_A 552 QAIKT--GQLQVA------EVSTLYDLDGVNSLEDALTNLVKTAIATVQAGAEIL 598 (1520)
T ss_dssp HHHHH--SSSCEE------EEECEEECSSSCCHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHhc--CCCceE------EEEEEEeCCchhHHHHHHHHHHHHHHHHHHCCCcEE
Confidence 88765 578754 577788765 68888887777777776677 443
No 10
>2fho_A Spliceosomal protein SF3B155; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.34 E-value=29 Score=21.48 Aligned_cols=21 Identities=19% Similarity=0.656 Sum_probs=18.0
Q ss_pred CCCCCHHHHHhhCCCCCCCeEec
Q 032274 79 LRPMAEDSAKHLMPKVVGWDLVN 101 (144)
Q Consensus 79 ~~~Ls~~EI~~lL~~LpGW~l~~ 101 (144)
-.+||++|++..|. +|.++.+
T Consensus 19 nrpltDEeLD~~LP--~GY~il~ 39 (47)
T 2fho_A 19 NRPLSDEELDAMFP--EGYKVLP 39 (47)
T ss_dssp CCCSCTTHHHHHSC--TTEEECC
T ss_pred cCCCCHHHHHHhCC--CCCeecC
Confidence 46899999999999 5988874
No 11
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=25.53 E-value=32 Score=29.77 Aligned_cols=17 Identities=18% Similarity=0.200 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHcC-Ce
Q 032274 121 LELFKLVADVAEAEG-NL 137 (144)
Q Consensus 121 l~FvN~VA~lAE~eg-DI 137 (144)
++|+|.+|.+||+.| |+
T Consensus 239 Ia~~NEla~ice~~GiDv 256 (444)
T 3vtf_A 239 ISFANEVGLLAKRLGVDT 256 (444)
T ss_dssp HHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHHHHHHHcCCCH
Confidence 799999999999999 54
No 12
>4f0h_B Ribulose bisphosphate carboxylase small chain; alpha beta domain, catalytic domain TIM barrel, carboxylase/oxygenase, nitrosylation; 1.96A {Galdieria sulphuraria} PDB: 4f0k_B 4f0m_B 1iwa_B 1bwv_S*
Probab=22.09 E-value=21 Score=26.70 Aligned_cols=23 Identities=9% Similarity=0.079 Sum_probs=18.0
Q ss_pred CCCCCCHHHHHhhCCCC--CCCeEe
Q 032274 78 DLRPMAEDSAKHLMPKV--VGWDLV 100 (144)
Q Consensus 78 ~~~~Ls~~EI~~lL~~L--pGW~l~ 100 (144)
=.|+||++||.+.+..+ .||.+.
T Consensus 10 yLP~ltd~qI~kQI~YlL~qGw~~~ 34 (138)
T 4f0h_B 10 FLPDLTDEQIKKQIDYMISKKLAIG 34 (138)
T ss_dssp TSCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred cCCCCCHHHHHHHHHHHHhCCCEEE
Confidence 36899999998877655 599864
No 13
>3zxw_B Ribulose bisphosphate carboxylase small chain; CO2/O2 specificity, carbon dioxide fixation, photosynthesis, thermostability; HET: KCX CAP; 2.10A {Thermosynechococcus elongatus} PDB: 2ybv_B*
Probab=21.68 E-value=17 Score=26.46 Aligned_cols=23 Identities=13% Similarity=0.289 Sum_probs=17.0
Q ss_pred CCCCCCHHHHHhhCCCC--CCCeEe
Q 032274 78 DLRPMAEDSAKHLMPKV--VGWDLV 100 (144)
Q Consensus 78 ~~~~Ls~~EI~~lL~~L--pGW~l~ 100 (144)
-.|+||++||.+.+..+ .||.+.
T Consensus 15 yLP~Lt~eqI~kQV~yll~qGw~~~ 39 (118)
T 3zxw_B 15 YLPPLSDAQIARQIQYAIDQGYHPC 39 (118)
T ss_dssp CSCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred cCCCCCHHHHHHHHHHHHhCCCeeE
Confidence 37899999988765544 499864
No 14
>1svd_M Ribulose bisphosphate carboxylase small chain; beta-alpha-barrel, lyase; 1.80A {Halothiobacillus neapolitanus} SCOP: d.73.1.1
Probab=21.56 E-value=22 Score=25.50 Aligned_cols=23 Identities=22% Similarity=0.407 Sum_probs=17.4
Q ss_pred CCCCCCHHHHHhhCCCC--CCCeEe
Q 032274 78 DLRPMAEDSAKHLMPKV--VGWDLV 100 (144)
Q Consensus 78 ~~~~Ls~~EI~~lL~~L--pGW~l~ 100 (144)
=.|+||++||.+.+..+ .||.+.
T Consensus 18 yLP~lt~eqI~kQV~Yll~qGw~p~ 42 (110)
T 1svd_M 18 YLPPMNAERIRAQIKYAIAQGWSPG 42 (110)
T ss_dssp TSCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred cCCCCCHHHHHHHHHHHHHCCCeeE
Confidence 47899999998776544 499864
No 15
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=20.77 E-value=1.3e+02 Score=24.09 Aligned_cols=48 Identities=15% Similarity=0.117 Sum_probs=34.8
Q ss_pred CCHHHHHhhCCCCCCCeEeccCCcc--------------eEEEEEEcCChHHHHHHHHHHHH
Q 032274 82 MAEDSAKHLMPKVVGWDLVNENGIL--------------KLNRSLKVKSFTKGLELFKLVAD 129 (144)
Q Consensus 82 Ls~~EI~~lL~~LpGW~l~~~~G~~--------------~L~R~f~FkdF~~Al~FvN~VA~ 129 (144)
|+++||.+.|..+|=..+.+..|.. .-.-.+-|=+..+|-+|++++-.
T Consensus 2 L~e~eV~ekL~~VPVF~Itn~~G~Pll~~~~~~~~~~~~~~~V~~~F~s~~dA~~~L~~lk~ 63 (252)
T 4ev1_A 2 LSEQQIKEKLDSVPIYLVTNEKGLPLSRPLPNAPNGQKAGGSITGAYMSRQEAQAFINELRN 63 (252)
T ss_dssp CCHHHHHHHHTTSEEEEEECTTCCBCEEECCCCTTSCCSCSEEEEEESCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHhcCCcEEEEECCCCCeEEEecCCccccccCCCeEEEEEecHHHHHHHHHHHHh
Confidence 8999999999999877776544321 11225566689999999997654
Done!