BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032278
(144 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P18160|SPLA_DICDI Dual specificity protein kinase splA OS=Dictyostelium discoideum
GN=splA PE=1 SV=3
Length = 2410
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 24/32 (75%)
Query: 38 DVGLWLEEINLGGYRQIFKENGVNGEYLEGMS 69
DV +WLE N G YR+ F++N ++G +LEG++
Sbjct: 1738 DVAIWLESFNYGQYRKNFRDNNISGRHLEGIT 1769
>sp|Q52KW0|SHAN2_XENLA SH3 and multiple ankyrin repeat domains protein 2 OS=Xenopus laevis
GN=shank2 PE=2 SV=1
Length = 1292
Score = 36.2 bits (82), Expect = 0.067, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 23/32 (71%)
Query: 37 QDVGLWLEEINLGGYRQIFKENGVNGEYLEGM 68
QDV WLE ++LG +R++F +N ++G +L +
Sbjct: 1232 QDVAEWLESLHLGEHREMFMDNEIDGTHLPNL 1263
>sp|P54756|EPHA5_HUMAN Ephrin type-A receptor 5 OS=Homo sapiens GN=EPHA5 PE=1 SV=3
Length = 1037
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 35 SFQDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRF 79
+++ VG WLE I +G Y +IF ENG + ++ ++ T E + R
Sbjct: 966 AYRSVGEWLEAIKMGRYTEIFMENGYSS--MDAVAQVTLEDLRRL 1008
>sp|P54755|EPHA5_CHICK Ephrin type-A receptor 5 OS=Gallus gallus GN=EPHA5 PE=2 SV=1
Length = 1013
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 35 SFQDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRF 79
+++ VG WLE I +G Y +IF ENG + ++ ++ T E + R
Sbjct: 942 AYRSVGEWLEAIKMGRYTEIFMENGYSS--MDSVAQVTLEDLRRL 984
>sp|Q60629|EPHA5_MOUSE Ephrin type-A receptor 5 OS=Mus musculus GN=Epha5 PE=1 SV=2
Length = 876
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 35 SFQDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRF 79
+++ VG WLE I +G Y +IF ENG + ++ ++ T E + R
Sbjct: 805 AYRSVGEWLEAIKMGRYTEIFMENGYSS--MDAVAQVTLEDLRRL 847
>sp|Q9JLU4|SHAN3_RAT SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus
norvegicus GN=Shank3 PE=1 SV=2
Length = 1815
Score = 34.7 bits (78), Expect = 0.21, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 31 LTLLSFQDVGLWLEEINLGGYRQIFKENGVNGEYLEGMS 69
L L S DVG WLE I+LG +R F+++ + G +L ++
Sbjct: 1749 LQLWSKFDVGDWLESIHLGEHRDRFEDHEIEGAHLPALT 1787
>sp|Q4ACU6|SHAN3_MOUSE SH3 and multiple ankyrin repeat domains protein 3 OS=Mus musculus
GN=Shank3 PE=1 SV=2
Length = 1805
Score = 34.7 bits (78), Expect = 0.21, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 31 LTLLSFQDVGLWLEEINLGGYRQIFKENGVNGEYLEGMS 69
L L S DVG WLE I+LG +R F+++ + G +L ++
Sbjct: 1739 LQLWSKFDVGDWLESIHLGEHRDRFEDHEIEGAHLPALT 1777
>sp|Q9BYB0|SHAN3_HUMAN SH3 and multiple ankyrin repeat domains protein 3 OS=Homo sapiens
GN=SHANK3 PE=1 SV=2
Length = 1741
Score = 34.7 bits (78), Expect = 0.21, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 31 LTLLSFQDVGLWLEEINLGGYRQIFKENGVNGEYLEGMS 69
L L S DVG WLE I+LG +R F+++ + G +L ++
Sbjct: 1675 LQLWSKFDVGDWLESIHLGEHRDRFEDHEIEGAHLPALT 1713
>sp|Q9QX74|SHAN2_RAT SH3 and multiple ankyrin repeat domains protein 2 OS=Rattus
norvegicus GN=Shank2 PE=1 SV=2
Length = 1474
Score = 33.9 bits (76), Expect = 0.33, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 38 DVGLWLEEINLGGYRQIFKENGVNGEYLEGM 68
DV WLE +NLG +++ F +N ++G +L +
Sbjct: 1415 DVADWLESLNLGEHKETFMDNEIDGSHLPNL 1445
>sp|Q80Z38|SHAN2_MOUSE SH3 and multiple ankyrin repeat domains protein 2 OS=Mus musculus
GN=Shank2 PE=1 SV=2
Length = 1476
Score = 33.9 bits (76), Expect = 0.33, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 38 DVGLWLEEINLGGYRQIFKENGVNGEYLEGM 68
DV WLE +NLG +++ F +N ++G +L +
Sbjct: 1417 DVADWLESLNLGEHKETFMDNEIDGSHLPNL 1447
>sp|Q5DTW2|SMBT2_MOUSE Scm-like with four MBT domains protein 2 OS=Mus musculus GN=Sfmbt2
PE=2 SV=2
Length = 938
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 35 SFQDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLC 94
S DV +++ + +IF+E ++G+ L +++ T ++ + +K G I LC
Sbjct: 869 SVTDVVRFIKLTDCAPLARIFQEQDIDGQALLLLTLPTVQECM------ELKLGPAIKLC 922
Query: 95 KELRRIKVA 103
++ R+KVA
Sbjct: 923 HQIERVKVA 931
>sp|Q9UPX8|SHAN2_HUMAN SH3 and multiple ankyrin repeat domains protein 2 OS=Homo sapiens
GN=SHANK2 PE=1 SV=3
Length = 1470
Score = 33.5 bits (75), Expect = 0.39, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 38 DVGLWLEEINLGGYRQIFKENGVNGEYLEGM 68
DV WLE +NLG +++ F +N ++G +L +
Sbjct: 1411 DVADWLESLNLGEHKEAFMDNEIDGSHLPNL 1441
>sp|Q5VUG0|SMBT2_HUMAN Scm-like with four MBT domains protein 2 OS=Homo sapiens GN=SFMBT2
PE=1 SV=1
Length = 894
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 35 SFQDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLC 94
+ DV +++ + +IF+E ++G+ L +++ T ++ + +K G I LC
Sbjct: 825 TVTDVVRFIKLTDCAPLAKIFQEQDIDGQALLLLTLPTVQECME------LKLGPAIKLC 878
Query: 95 KELRRIKVA 103
++ R+KVA
Sbjct: 879 HQIERVKVA 887
>sp|P54757|EPHA5_RAT Ephrin type-A receptor 5 OS=Rattus norvegicus GN=Epha5 PE=1 SV=1
Length = 1005
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 35 SFQDVGLWLEEINLGGYRQIFKENG 59
+++ VG WLE +G Y +IF ENG
Sbjct: 968 AYRSVGEWLEATKMGRYTEIFMENG 992
>sp|Q9D0I6|WSDU1_MOUSE WD repeat, SAM and U-box domain-containing protein 1 OS=Mus
musculus GN=Wdsub1 PE=2 SV=1
Length = 474
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 12/68 (17%)
Query: 10 FLVYGRKQKSVNIW-----------FND-MPHALTLLSFQDVGLWLEEINLGGYRQIFKE 57
L G K+VNIW ND + H S +DV +WL L IF+
Sbjct: 294 LLATGSMDKTVNIWQFDLETPCQGSMNDPLKHFTEEWSEEDVSVWLRAQGLEDLVGIFRA 353
Query: 58 NGVNGEYL 65
N ++G+ L
Sbjct: 354 NNIDGKEL 361
>sp|Q5FVN8|WSDU1_RAT WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus
norvegicus GN=Wdsub1 PE=2 SV=1
Length = 476
Score = 29.6 bits (65), Expect = 6.6, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 13/69 (18%)
Query: 10 FLVYGRKQKSVNIWFNDM-------------PHALTLLSFQDVGLWLEEINLGGYRQIFK 56
L G K+VNIW D+ H + S +DV WL L IF+
Sbjct: 295 LLATGSMDKTVNIWQFDLETPCQAGSVSDQLKHFIEDWSEEDVSKWLRAQGLEDLVDIFR 354
Query: 57 ENGVNGEYL 65
N ++G+ L
Sbjct: 355 TNNIDGKEL 363
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.140 0.451
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,766,169
Number of Sequences: 539616
Number of extensions: 1888518
Number of successful extensions: 4477
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 4463
Number of HSP's gapped (non-prelim): 19
length of query: 144
length of database: 191,569,459
effective HSP length: 106
effective length of query: 38
effective length of database: 134,370,163
effective search space: 5106066194
effective search space used: 5106066194
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)