Query 032278
Match_columns 144
No_of_seqs 34 out of 36
Neff 2.5
Searched_HMMs 29240
Date Mon Mar 25 19:30:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032278.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032278hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bs7_A Protein aveugle; sterIl 99.7 7.4E-17 2.5E-21 107.5 6.1 69 30-104 2-72 (78)
2 2gle_A Neurabin-1; SAM domain, 99.7 6.5E-17 2.2E-21 106.9 4.6 72 29-106 2-73 (74)
3 3bq7_A Diacylglycerol kinase d 99.6 3.4E-16 1.2E-20 106.2 6.1 70 28-103 4-73 (81)
4 2f3n_A SH3 and multiple ankyri 99.6 3.6E-16 1.2E-20 105.0 5.6 66 31-102 2-67 (76)
5 3bs5_A Protein aveugle; sterIl 99.6 4.6E-16 1.6E-20 111.7 6.2 72 27-104 19-92 (106)
6 1v85_A Similar to ring finger 99.6 4.4E-16 1.5E-20 108.1 4.2 70 28-103 14-87 (91)
7 2e8o_A SAM domain and HD domai 99.6 7.3E-16 2.5E-20 109.0 5.1 68 28-101 24-93 (103)
8 3bs5_B Connector enhancer of k 99.6 1.4E-15 4.7E-20 101.8 6.0 70 30-105 3-74 (80)
9 2ean_A Connector enhancer of k 99.6 2.2E-15 7.5E-20 101.9 6.0 72 28-105 5-78 (83)
10 1pk1_B Sex COMB on midleg CG94 99.6 2.7E-15 9.2E-20 105.7 5.5 70 28-103 11-82 (89)
11 2d8c_A Phosphatidylcholine:cer 99.6 2E-15 7E-20 107.9 4.5 71 28-106 14-86 (97)
12 1kw4_A Polyhomeotic; SAM domai 99.5 2.2E-15 7.6E-20 105.5 4.1 70 28-103 11-81 (89)
13 1wwv_A Connector enhancer of k 99.4 2.8E-13 9.5E-18 95.7 3.6 69 28-104 8-78 (91)
14 2ke7_A Ankyrin repeat and ster 99.3 2.9E-13 1E-17 96.1 2.6 83 28-121 14-99 (103)
15 2e8n_A Ephrin type-A receptor 99.3 4.5E-12 1.5E-16 87.4 6.3 81 30-120 5-87 (88)
16 1ow5_A Serine/threonine-protei 99.2 6.1E-12 2.1E-16 90.6 3.9 59 38-102 17-76 (85)
17 2l5y_A Stromal interaction mol 99.2 1.7E-12 5.8E-17 100.3 0.4 65 28-94 75-140 (150)
18 2kso_A Ephrin type-A receptor 99.2 2.3E-11 7.8E-16 83.7 5.6 67 30-102 10-77 (82)
19 3tad_C Liprin-beta-1; protein 99.1 2.9E-11 9.9E-16 99.8 5.1 71 27-102 11-81 (265)
20 2eam_A Putative 47 kDa protein 99.1 1.8E-11 6E-16 82.8 2.6 64 32-101 8-74 (80)
21 2kg5_A ARF-GAP, RHO-GAP domain 99.1 4E-11 1.4E-15 85.7 4.4 66 31-102 21-87 (100)
22 2qkq_A Ephrin type-B receptor 99.1 4.8E-11 1.6E-15 81.1 3.9 67 31-103 9-77 (83)
23 1ucv_A Ephrin type-A receptor 99.1 9.4E-11 3.2E-15 79.7 5.1 64 35-104 6-70 (81)
24 2k4p_A Phosphatidylinositol-3, 99.1 4.6E-11 1.6E-15 83.7 3.1 68 28-101 18-86 (86)
25 1b4f_A EPHB2; SAM domain, EPH 99.1 1.1E-10 3.7E-15 79.0 4.8 67 32-104 6-74 (82)
26 2dl0_A SAM and SH3 domain-cont 99.1 8.7E-11 3E-15 83.6 4.3 68 28-101 15-83 (97)
27 2eao_A Ephrin type-B receptor 99.1 1.2E-10 4E-15 82.0 4.7 65 34-104 20-85 (99)
28 3h8m_A Ephrin type-A receptor 99.0 2E-10 6.8E-15 80.7 4.8 65 32-102 21-86 (90)
29 1b0x_A Protein (EPHA4 receptor 99.0 2.5E-10 8.7E-15 79.6 5.1 64 34-103 24-88 (94)
30 2k60_A Protein (stromal intera 99.0 6.9E-11 2.4E-15 91.4 2.0 45 28-72 75-120 (150)
31 2kiv_A Ankyrin repeat and ster 99.0 5.3E-10 1.8E-14 82.9 4.6 62 35-102 13-77 (148)
32 3kka_C Ephrin type-A receptor 98.9 4.7E-10 1.6E-14 78.3 3.9 64 32-101 17-81 (86)
33 3hil_A Ephrin type-A receptor 98.9 8.4E-10 2.9E-14 76.4 4.6 60 34-99 21-81 (82)
34 1x40_A ARAP2; ASAP-related pro 98.9 1.5E-09 5.2E-14 75.6 5.1 62 36-103 15-77 (91)
35 2lmr_A ODIN, ankyrin repeat an 98.9 1.1E-09 3.9E-14 78.7 3.6 64 33-102 26-92 (101)
36 2dkz_A Hypothetical protein LO 98.9 1.3E-09 4.6E-14 78.4 3.9 48 27-78 11-59 (84)
37 3sei_A Caskin-1; SAM domain, p 98.8 1.6E-09 5.6E-14 81.0 3.6 63 35-103 9-71 (149)
38 3k1r_B Usher syndrome type-1G 98.8 5.1E-09 1.7E-13 71.0 5.2 63 37-106 3-65 (74)
39 3sei_A Caskin-1; SAM domain, p 98.8 9.7E-09 3.3E-13 76.8 6.0 64 32-101 75-139 (149)
40 1v38_A SAM-domain protein sams 98.8 1.2E-08 4.1E-13 69.3 5.6 64 32-101 8-72 (78)
41 3tad_C Liprin-beta-1; protein 98.7 3.7E-08 1.3E-12 81.4 7.5 69 29-103 85-153 (265)
42 3tac_B Liprin-alpha-2; transfe 98.6 3E-08 1E-12 85.0 5.3 66 28-98 33-103 (334)
43 1uqv_A STE50 protein; SAM, ste 98.5 1.4E-07 4.9E-12 67.9 5.4 68 28-101 6-77 (85)
44 2kiv_A Ankyrin repeat and ster 98.5 1.3E-07 4.3E-12 70.1 4.4 62 32-98 84-146 (148)
45 2eap_A Lymphocyte cytosolic pr 98.3 2.6E-07 9E-12 67.3 2.6 43 26-69 14-57 (90)
46 3tac_B Liprin-alpha-2; transfe 97.9 8.6E-06 2.9E-10 69.9 4.8 45 30-74 156-201 (334)
47 2qar_B Telsam domain; polymer, 97.9 6.6E-06 2.3E-10 58.4 3.4 67 28-104 9-78 (93)
48 1sv0_C Modulator of the activi 97.7 2.4E-05 8E-10 53.9 3.3 68 26-103 6-79 (82)
49 2d3d_A VTS1 protein; RNA bindi 97.5 0.00011 3.9E-09 52.5 5.2 63 37-107 19-81 (88)
50 1ji7_A ETS-related protein TEL 97.5 5E-05 1.7E-09 53.5 3.2 66 28-103 9-77 (89)
51 2y9t_A Tumor protein 63; apopt 97.4 0.00027 9.2E-09 49.5 5.7 63 38-106 8-70 (82)
52 2b6g_A VTS1P; alpha-helix, pen 97.4 0.00021 7E-09 53.6 5.3 64 36-107 49-112 (119)
53 2y9u_A Tumor protein 63; apopt 97.4 0.00042 1.4E-08 47.0 6.3 61 38-104 6-66 (69)
54 2es6_A VTS1P; SAM domain, prot 97.4 0.00017 5.9E-09 53.0 4.7 63 37-107 32-94 (101)
55 1oxj_A RNA-binding protein sma 96.8 0.00082 2.8E-08 53.4 3.5 56 37-101 8-63 (173)
56 1wwu_A Hypothetical protein FL 96.8 0.00075 2.6E-08 49.5 2.9 43 32-76 22-65 (99)
57 2e8m_A Epidermal growth factor 96.8 0.00066 2.3E-08 49.9 2.6 43 32-76 32-75 (99)
58 1x66_A Friend leukemia integra 96.2 0.0033 1.1E-07 44.9 3.3 65 27-101 20-89 (98)
59 1sxd_A GA repeat binding prote 96.1 0.0054 1.9E-07 43.3 4.1 64 26-101 18-85 (91)
60 1sv0_A ETS DNA-binding protein 96.0 0.0056 1.9E-07 42.8 3.6 66 27-103 6-75 (85)
61 4h5i_A Guanine nucleotide-exch 95.4 0.0053 1.8E-07 47.3 1.6 21 9-29 325-345 (365)
62 4aow_A Guanine nucleotide-bind 95.0 0.0069 2.4E-07 43.3 1.2 19 8-26 51-69 (340)
63 2dkx_A SAM pointed domain-cont 94.7 0.016 5.6E-07 41.1 2.5 66 26-102 19-88 (96)
64 2jv3_A ETS1 proto-oncogene; ET 94.5 0.0099 3.4E-07 43.3 1.0 56 26-90 36-96 (110)
65 2h80_A STAR-related lipid tran 94.1 0.024 8.2E-07 40.7 2.3 45 36-80 21-71 (81)
66 2dky_A RHO-GTPase-activating p 94.1 0.012 4.1E-07 43.0 0.6 46 33-78 20-71 (91)
67 2ytu_A Friend leukemia integra 93.5 0.052 1.8E-06 40.8 3.2 66 28-103 35-105 (128)
68 1sxe_A Transcriptional regulat 93.1 0.05 1.7E-06 38.7 2.5 57 27-91 23-84 (97)
69 4gga_A P55CDC, cell division c 93.0 0.029 9.8E-07 43.2 1.2 20 9-28 377-396 (420)
70 4gq1_A NUP37; propeller, trans 92.9 0.032 1.1E-06 43.0 1.4 17 9-25 157-173 (393)
71 3ow8_A WD repeat-containing pr 91.9 0.026 9E-07 42.5 -0.3 19 9-27 49-67 (321)
72 3bg1_A Protein SEC13 homolog; 91.1 0.069 2.4E-06 39.7 1.3 18 9-26 26-43 (316)
73 2e8p_A ELF3 protein; cell-free 91.0 0.09 3.1E-06 37.5 1.7 57 28-91 21-81 (92)
74 4ggc_A P55CDC, cell division c 90.7 0.087 3E-06 37.2 1.4 19 9-27 80-98 (318)
75 2pm7_B Protein transport prote 90.7 0.087 3E-06 38.6 1.4 19 9-27 68-86 (297)
76 2xzm_R RACK1; ribosome, transl 90.6 0.08 2.7E-06 39.5 1.2 18 9-26 40-57 (343)
77 3zwl_B Eukaryotic translation 90.5 0.083 2.8E-06 37.6 1.2 29 9-37 328-356 (369)
78 2qb0_B Telsam domain - lysozym 90.5 0.096 3.3E-06 41.4 1.7 43 27-71 8-54 (241)
79 2pm7_B Protein transport prote 90.5 0.086 2.9E-06 38.7 1.3 18 9-26 22-39 (297)
80 3fm0_A Protein CIAO1; WDR39,SG 89.3 0.12 4E-06 38.9 1.2 18 9-26 29-46 (345)
81 4e54_B DNA damage-binding prot 89.1 0.12 4E-06 40.1 1.1 18 9-26 133-150 (435)
82 3frx_A Guanine nucleotide-bind 88.9 0.14 4.7E-06 38.1 1.4 18 9-26 31-48 (319)
83 3frx_A Guanine nucleotide-bind 88.5 0.16 5.3E-06 37.8 1.4 19 9-27 78-96 (319)
84 4h5i_A Guanine nucleotide-exch 88.2 0.15 5.2E-06 39.1 1.2 19 9-27 282-300 (365)
85 2ynn_A Coatomer subunit beta'; 88.2 0.16 5.5E-06 37.3 1.3 19 9-27 110-128 (304)
86 3iz6_a 40S ribosomal protein R 88.0 0.18 6.1E-06 38.4 1.5 18 9-26 79-96 (380)
87 3bg1_A Protein SEC13 homolog; 87.9 0.16 5.4E-06 37.7 1.1 19 9-27 72-90 (316)
88 2hes_X YDR267CP; beta-propelle 87.8 0.17 5.7E-06 37.8 1.2 18 9-26 120-137 (330)
89 3f3f_A Nucleoporin SEH1; struc 87.5 0.2 6.8E-06 34.8 1.4 18 9-26 24-41 (351)
90 4e54_B DNA damage-binding prot 87.5 0.19 6.4E-06 38.9 1.3 18 9-26 178-195 (435)
91 2xzm_R RACK1; ribosome, transl 87.5 0.2 6.9E-06 37.3 1.4 19 9-27 89-107 (343)
92 2j04_B YDR362CP, TAU91; beta p 87.3 0.18 6.2E-06 42.3 1.3 18 9-26 324-341 (524)
93 4g56_B MGC81050 protein; prote 87.2 0.18 6.2E-06 38.4 1.1 19 9-27 283-301 (357)
94 2ynn_A Coatomer subunit beta'; 87.1 0.21 7.3E-06 36.7 1.4 19 9-27 199-217 (304)
95 2w18_A PALB2, fancn, partner a 87.1 0.2 6.9E-06 42.4 1.4 19 9-27 194-212 (356)
96 3gre_A Serine/threonine-protei 87.0 0.21 7.1E-06 37.8 1.3 18 9-26 77-94 (437)
97 4gqb_B Methylosome protein 50; 86.9 0.19 6.6E-06 38.7 1.1 20 8-27 270-289 (344)
98 3f3f_A Nucleoporin SEH1; struc 86.8 0.22 7.4E-06 34.6 1.2 20 9-28 231-250 (351)
99 2pbi_B Guanine nucleotide-bind 85.7 0.28 9.5E-06 37.2 1.4 18 9-26 77-94 (354)
100 2hes_X YDR267CP; beta-propelle 85.5 0.27 9.2E-06 36.7 1.2 18 10-27 26-43 (330)
101 3iz6_a 40S ribosomal protein R 85.5 0.27 9.4E-06 37.4 1.3 20 9-28 262-281 (380)
102 3vu4_A KMHSV2; beta-propeller 85.5 0.25 8.7E-06 37.5 1.1 19 9-27 208-227 (355)
103 3fm0_A Protein CIAO1; WDR39,SG 85.2 0.28 9.4E-06 36.9 1.2 19 9-27 118-136 (345)
104 1got_B GT-beta; complex (GTP-b 85.0 0.31 1.1E-05 36.4 1.4 18 9-26 68-85 (340)
105 3vu4_A KMHSV2; beta-propeller 84.9 0.36 1.2E-05 36.6 1.7 20 9-28 253-272 (355)
106 4a11_B DNA excision repair pro 84.7 0.34 1.2E-05 35.1 1.4 20 9-28 347-366 (408)
107 4aow_A Guanine nucleotide-bind 84.4 0.35 1.2E-05 34.4 1.4 19 9-27 228-246 (340)
108 3lrv_A PRE-mRNA-splicing facto 84.4 0.31 1.1E-05 36.2 1.2 19 9-27 49-67 (343)
109 4gqb_B Methylosome protein 50; 84.4 0.31 1.1E-05 37.5 1.2 19 9-27 140-158 (344)
110 1nr0_A Actin interacting prote 84.0 0.33 1.1E-05 39.8 1.2 20 9-28 549-568 (611)
111 3dm0_A Maltose-binding peripla 83.7 0.37 1.3E-05 39.8 1.4 18 9-26 396-413 (694)
112 4gq1_A NUP37; propeller, trans 83.6 0.35 1.2E-05 37.2 1.2 17 9-25 102-118 (393)
113 3ow8_A WD repeat-containing pr 83.3 0.41 1.4E-05 35.9 1.4 19 9-27 93-111 (321)
114 4gga_A P55CDC, cell division c 83.1 0.39 1.3E-05 36.8 1.2 19 9-27 160-178 (420)
115 3mmy_A MRNA export factor; mRN 82.7 0.46 1.6E-05 33.8 1.4 19 9-27 55-73 (368)
116 3odt_A Protein DOA1; ubiquitin 82.3 0.48 1.7E-05 33.1 1.4 19 9-27 30-48 (313)
117 3idw_A Actin cytoskeleton-regu 82.1 1.5 5.2E-05 30.5 3.8 43 49-98 20-62 (72)
118 2aq5_A Coronin-1A; WD40 repeat 81.9 0.56 1.9E-05 35.4 1.6 19 9-27 95-113 (402)
119 2pbi_B Guanine nucleotide-bind 81.7 0.47 1.6E-05 36.0 1.2 20 9-28 253-272 (354)
120 1got_B GT-beta; complex (GTP-b 81.6 0.48 1.6E-05 35.3 1.2 20 9-28 239-258 (340)
121 1nr0_A Actin interacting prote 81.5 0.5 1.7E-05 38.8 1.4 18 9-26 72-89 (611)
122 1vyh_C Platelet-activating fac 81.5 0.52 1.8E-05 36.5 1.4 19 9-27 309-327 (410)
123 3lrv_A PRE-mRNA-splicing facto 81.4 0.5 1.7E-05 35.0 1.3 21 9-29 183-203 (343)
124 1vyh_C Platelet-activating fac 81.3 0.5 1.7E-05 36.6 1.3 18 9-26 121-138 (410)
125 3dw8_B Serine/threonine-protei 81.3 0.54 1.8E-05 35.1 1.4 19 9-27 41-59 (447)
126 4ery_A WD repeat-containing pr 81.2 0.51 1.7E-05 34.0 1.2 20 9-28 250-269 (312)
127 3mmy_A MRNA export factor; mRN 81.1 0.55 1.9E-05 33.4 1.3 19 9-27 286-304 (368)
128 3dwl_C Actin-related protein 2 80.7 0.46 1.6E-05 34.8 0.8 19 9-27 68-86 (377)
129 3jrp_A Fusion protein of prote 80.6 0.55 1.9E-05 33.6 1.2 18 9-26 24-41 (379)
130 1erj_A Transcriptional repress 80.5 0.54 1.8E-05 35.9 1.2 19 9-27 136-154 (393)
131 2oaj_A Protein SNI1; WD40 repe 80.4 0.55 1.9E-05 41.7 1.4 20 9-28 448-467 (902)
132 2w18_A PALB2, fancn, partner a 80.2 0.55 1.9E-05 39.7 1.2 18 10-27 297-314 (356)
133 4ery_A WD repeat-containing pr 79.9 0.66 2.2E-05 33.4 1.4 19 9-27 78-96 (312)
134 3jrp_A Fusion protein of prote 79.8 0.61 2.1E-05 33.4 1.2 20 8-27 69-88 (379)
135 1sq9_A Antiviral protein SKI8; 79.7 0.66 2.3E-05 34.0 1.4 20 9-28 27-46 (397)
136 2j04_B YDR362CP, TAU91; beta p 79.7 0.58 2E-05 39.3 1.2 19 9-27 226-244 (524)
137 3v7d_B Cell division control p 79.4 0.63 2.2E-05 35.4 1.2 19 9-27 133-151 (464)
138 1erj_A Transcriptional repress 79.1 0.69 2.4E-05 35.3 1.4 19 9-27 269-287 (393)
139 3ei3_B DNA damage-binding prot 79.0 0.68 2.3E-05 34.3 1.3 19 9-27 87-105 (383)
140 3gre_A Serine/threonine-protei 79.0 0.71 2.4E-05 34.8 1.4 20 9-28 341-360 (437)
141 1dxs_A P53-like transcription 78.9 1 3.6E-05 32.0 2.2 44 38-89 8-51 (80)
142 3vl1_A 26S proteasome regulato 78.6 0.75 2.6E-05 34.1 1.4 19 9-27 152-170 (420)
143 4a11_B DNA excision repair pro 78.5 0.71 2.4E-05 33.4 1.2 19 9-27 57-75 (408)
144 3dw8_B Serine/threonine-protei 78.3 0.8 2.7E-05 34.2 1.5 20 9-28 355-374 (447)
145 2pm9_A Protein WEB1, protein t 78.3 0.85 2.9E-05 33.5 1.6 21 9-29 319-339 (416)
146 3k26_A Polycomb protein EED; W 77.6 0.9 3.1E-05 32.4 1.5 20 8-27 299-318 (366)
147 3i2n_A WD repeat-containing pr 77.4 0.86 3E-05 32.4 1.4 18 10-27 274-291 (357)
148 3k26_A Polycomb protein EED; W 77.1 0.83 2.8E-05 32.5 1.2 19 9-27 129-147 (366)
149 2ymu_A WD-40 repeat protein; u 77.0 0.82 2.8E-05 35.6 1.2 17 9-25 29-45 (577)
150 3vl1_A 26S proteasome regulato 76.6 0.91 3.1E-05 33.7 1.4 19 9-27 347-365 (420)
151 1r5m_A SIR4-interacting protei 76.5 0.94 3.2E-05 32.9 1.4 16 10-25 60-75 (425)
152 1p22_A F-BOX/WD-repeat protein 76.2 0.88 3E-05 34.9 1.2 20 10-29 397-416 (435)
153 3v7d_B Cell division control p 76.2 0.89 3E-05 34.6 1.2 18 10-27 175-192 (464)
154 1yfq_A Cell cycle arrest prote 76.1 0.98 3.4E-05 32.2 1.4 18 9-26 24-41 (342)
155 3lm3_A Uncharacterized protein 76.0 0.2 6.7E-06 44.4 -2.8 67 26-93 35-108 (449)
156 3dwl_C Actin-related protein 2 75.7 0.95 3.2E-05 33.1 1.2 18 9-26 159-176 (377)
157 3dm0_A Maltose-binding peripla 75.2 1 3.5E-05 37.2 1.4 19 9-27 443-461 (694)
158 4g56_B MGC81050 protein; prote 75.0 0.97 3.3E-05 34.4 1.2 19 9-27 152-170 (357)
159 3ei3_B DNA damage-binding prot 75.0 1.1 3.8E-05 33.1 1.5 18 10-27 219-236 (383)
160 1yfq_A Cell cycle arrest prote 75.0 1.1 3.6E-05 32.0 1.3 20 9-28 264-283 (342)
161 4ggc_A P55CDC, cell division c 75.0 1 3.5E-05 31.6 1.2 19 9-27 163-181 (318)
162 3zwl_B Eukaryotic translation 74.3 1.2 4E-05 31.6 1.4 19 9-27 87-105 (369)
163 2ovr_B FBW7, F-BOX/WD repeat p 74.0 1.2 4E-05 34.1 1.4 20 9-28 373-392 (445)
164 2ovr_B FBW7, F-BOX/WD repeat p 73.9 1.1 3.8E-05 34.2 1.2 19 9-27 130-148 (445)
165 1p22_A F-BOX/WD-repeat protein 73.3 1.1 3.9E-05 34.3 1.2 19 9-27 184-202 (435)
166 4aez_A CDC20, WD repeat-contai 73.3 1.3 4.3E-05 33.6 1.4 21 9-29 362-382 (401)
167 3i2n_A WD repeat-containing pr 73.0 1.2 3.9E-05 31.8 1.1 19 9-27 81-99 (357)
168 1sq9_A Antiviral protein SKI8; 73.0 1.3 4.5E-05 32.4 1.4 20 9-28 304-323 (397)
169 2xyi_A Probable histone-bindin 72.8 1.3 4.4E-05 34.3 1.4 18 10-27 292-309 (430)
170 2ymu_A WD-40 repeat protein; u 72.6 1.2 4.2E-05 34.6 1.2 18 9-26 521-538 (577)
171 2vdu_B TRNA (guanine-N(7)-)-me 72.4 1.4 4.6E-05 34.1 1.4 21 9-29 253-273 (450)
172 1k8k_C P40, ARP2/3 complex 41 72.3 1.3 4.4E-05 31.9 1.2 19 9-27 65-83 (372)
173 2aq5_A Coronin-1A; WD40 repeat 72.2 1.3 4.4E-05 33.4 1.2 19 9-27 145-163 (402)
174 2pm9_A Protein WEB1, protein t 72.1 1.3 4.6E-05 32.4 1.3 19 9-27 276-294 (416)
175 2oit_A Nucleoporin 214KDA; NH2 71.8 1.3 4.4E-05 35.6 1.2 19 9-27 163-181 (434)
176 4aez_A CDC20, WD repeat-contai 70.6 1.5 5E-05 33.3 1.2 19 9-27 230-248 (401)
177 1pgu_A Actin interacting prote 70.5 1.6 5.3E-05 33.9 1.4 18 9-26 79-96 (615)
178 1k8k_C P40, ARP2/3 complex 41 70.2 1.7 5.9E-05 31.2 1.5 19 9-27 215-233 (372)
179 2vdu_B TRNA (guanine-N(7)-)-me 69.8 1.5 5.2E-05 33.9 1.2 20 9-28 211-230 (450)
180 1pgu_A Actin interacting prote 69.1 1.6 5.5E-05 33.8 1.2 21 8-28 553-573 (615)
181 3odt_A Protein DOA1; ubiquitin 66.6 2.1 7.3E-05 29.8 1.3 18 10-27 238-255 (313)
182 1gxr_A ESG1, transducin-like e 66.2 2.3 7.8E-05 29.9 1.4 19 9-27 278-296 (337)
183 2oaj_A Protein SNI1; WD40 repe 65.8 2.1 7.1E-05 38.1 1.4 17 9-25 643-659 (902)
184 2xyi_A Probable histone-bindin 65.4 2 6.7E-05 33.2 1.0 19 9-27 335-353 (430)
185 1r5m_A SIR4-interacting protei 63.9 2.4 8.3E-05 30.7 1.2 19 9-27 343-361 (425)
186 3klb_A Putative flavoprotein; 62.8 3.6 0.00012 29.4 1.9 15 34-48 148-162 (162)
187 3in6_A FMN-binding protein; st 61.6 1.7 5.9E-05 33.2 0.1 25 1-25 22-49 (148)
188 3f0i_A Arsenate reductase; str 60.5 6.8 0.00023 27.4 3.0 51 32-82 39-90 (119)
189 1gxr_A ESG1, transducin-like e 60.2 3.4 0.00012 28.9 1.4 19 9-27 196-214 (337)
190 3mkq_A Coatomer beta'-subunit; 60.0 2.7 9.2E-05 34.3 0.9 18 9-26 26-43 (814)
191 3jro_A Fusion protein of prote 57.2 3.8 0.00013 34.9 1.4 18 9-26 22-39 (753)
192 3jro_A Fusion protein of prote 53.6 4.3 0.00015 34.6 1.2 18 9-26 68-85 (753)
193 3rdw_A Putative arsenate reduc 52.8 13 0.00045 25.9 3.4 51 32-82 40-91 (121)
194 4ici_A Putative flavoprotein; 52.3 6.2 0.00021 28.6 1.7 22 28-49 150-171 (171)
195 2j04_A TAU60, YPL007P, hypothe 50.7 5.5 0.00019 35.8 1.5 18 10-27 143-160 (588)
196 1l0q_A Surface layer protein; 50.7 6.1 0.00021 29.0 1.4 18 10-27 4-21 (391)
197 2oit_A Nucleoporin 214KDA; NH2 49.0 5.1 0.00018 32.0 0.9 18 9-26 105-126 (434)
198 3sfz_A APAF-1, apoptotic pepti 47.9 6.5 0.00022 34.3 1.4 19 9-27 670-688 (1249)
199 3sfz_A APAF-1, apoptotic pepti 45.7 7.7 0.00026 33.8 1.5 19 9-27 756-774 (1249)
200 2p2u_A HOST-nuclease inhibitor 45.0 14 0.00047 28.0 2.7 43 23-67 95-138 (171)
201 2j04_A TAU60, YPL007P, hypothe 43.7 8.5 0.00029 34.6 1.5 19 11-29 195-213 (588)
202 3l78_A Regulatory protein SPX; 43.0 27 0.00093 24.1 3.8 50 32-82 35-85 (120)
203 2hl7_A Cytochrome C-type bioge 42.6 8.3 0.00029 26.9 1.1 20 70-92 59-78 (84)
204 2qol_A Ephrin receptor; recept 42.3 5.3 0.00018 31.3 0.0 25 37-61 340-364 (373)
205 3mkq_A Coatomer beta'-subunit; 41.6 9.9 0.00034 31.0 1.5 19 9-27 110-128 (814)
206 3fz4_A Putative arsenate reduc 41.3 21 0.00072 24.9 3.0 50 32-82 38-90 (120)
207 2kw0_A CCMH protein; oxidoredu 40.7 9.3 0.00032 27.2 1.1 20 70-92 56-75 (90)
208 3bws_A Protein LP49; two-domai 39.2 11 0.00039 27.9 1.4 19 9-27 182-200 (433)
209 3gkx_A Putative ARSC family re 36.8 24 0.00084 24.5 2.8 50 32-82 39-91 (120)
210 3qk9_A Mitochondrial import in 35.3 10 0.00035 30.0 0.7 85 50-134 11-126 (222)
211 3bws_A Protein LP49; two-domai 30.9 21 0.00071 26.5 1.7 19 9-27 372-390 (433)
212 2a2p_A Selenoprotein M, SELM p 30.6 22 0.00076 26.7 1.8 22 28-49 71-92 (129)
213 1z4h_A TORI, TOR inhibition pr 29.4 18 0.0006 22.6 0.9 13 33-45 47-59 (66)
214 2gs0_B Cellular tumor antigen 28.0 22 0.00074 23.7 1.2 10 35-44 27-36 (54)
215 2voi_B BH3-interacting domain 27.5 31 0.001 20.9 1.7 23 70-92 1-23 (34)
216 1ji8_A Dissimilatory siroheme- 27.3 78 0.0027 23.1 4.2 41 28-89 24-68 (111)
217 1pby_B Quinohemoprotein amine 27.3 24 0.00083 24.6 1.4 17 10-26 3-19 (337)
218 2o8v_A Phosphoadenosine phosph 26.6 36 0.0012 26.0 2.4 20 30-49 181-200 (252)
219 3vnd_A TSA, tryptophan synthas 26.3 28 0.00094 27.9 1.7 58 44-101 108-165 (267)
220 3ezq_A Tumor necrosis factor r 26.2 94 0.0032 22.6 4.5 62 43-104 15-83 (115)
221 2oq2_A Phosphoadenosine phosph 26.0 34 0.0012 26.3 2.2 21 30-50 186-206 (261)
222 2igp_A Retinoblastoma-associat 26.0 89 0.003 22.4 4.2 40 36-83 20-59 (120)
223 2kbw_B BH3-interacting domain 25.6 37 0.0013 20.7 1.8 24 69-92 4-27 (35)
224 2goy_A Adenosine phosphosulfat 25.1 39 0.0013 26.2 2.4 21 30-50 195-215 (275)
225 1sur_A PAPS reductase; assimil 24.3 41 0.0014 24.5 2.2 20 30-49 180-199 (215)
226 1n1j_A NF-YB; histone-like PAI 23.7 53 0.0018 22.0 2.6 23 33-55 62-84 (93)
227 3cxj_A Uncharacterized protein 22.7 29 0.00099 26.9 1.2 15 35-49 4-18 (165)
228 3omd_A Uncharacterized protein 22.6 48 0.0016 25.2 2.3 32 52-83 52-85 (145)
229 1qop_A Tryptophan synthase alp 21.4 35 0.0012 26.4 1.4 50 45-94 108-157 (268)
230 1zun_A Sulfate adenylyltransfe 20.7 48 0.0016 26.8 2.2 30 30-59 204-240 (325)
231 1j9i_A GPNU1 DBD;, terminase s 20.3 36 0.0012 21.0 1.1 26 31-56 38-63 (68)
232 1ich_A TNF-1, tumor necrosis f 20.0 1.3E+02 0.0046 21.7 4.2 65 39-104 16-89 (112)
233 3oq9_A Tumor necrosis factor r 20.0 1E+02 0.0034 21.1 3.4 59 44-102 8-73 (86)
No 1
>3bs7_A Protein aveugle; sterIle alpha motif (SAM) domain, cytoplasm, membrane, sensory transduction, vision, signaling protein; 1.90A {Drosophila melanogaster}
Probab=99.67 E-value=7.4e-17 Score=107.53 Aligned_cols=69 Identities=19% Similarity=0.327 Sum_probs=61.1
Q ss_pred cccCCChhHHHHHHHhc--CcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHHH
Q 032278 30 ALTLLSFQDVGLWLEEI--NLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVAC 104 (144)
Q Consensus 30 ~~~~WS~EDVa~WLeei--GL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~~ 104 (144)
++..||+|||+.||+.+ ||++|.+.|++|+|||+.|+.|| ++-|+.++. .+.||+.++..+++.+|...
T Consensus 2 ~v~~Wt~~~V~~WL~~~~~gl~~y~~~F~~~~I~G~~Ll~L~----~~dL~~lGI--~~~g~r~~il~~I~~Lr~~~ 72 (78)
T 3bs7_A 2 AVYLWTVSDVLKWYRRHCGEYTQYEQLFAQHDITGRALLRIT----DSSLQRMGV--TDNRDREAIWREIVKQRLKT 72 (78)
T ss_dssp CGGGCCHHHHHHHHHHHSGGGGGGHHHHHHTTCCHHHHTTCC----HHHHHHHTC--CCHHHHHHHHHHHHHHHHHH
T ss_pred ChhhCCHHHHHHHHHHHhcCHHHHHHHHHHCCCCHHHHhhCC----HHHHhHcCC--CCHHHHHHHHHHHHHHHhHH
Confidence 57899999999999996 99999999999999999999994 445666666 78999999999999998654
No 2
>2gle_A Neurabin-1; SAM domain, scaffold, protein protein interaction, protein binding; NMR {Rattus norvegicus}
Probab=99.66 E-value=6.5e-17 Score=106.91 Aligned_cols=72 Identities=25% Similarity=0.339 Sum_probs=62.2
Q ss_pred ccccCCChhHHHHHHHhcCcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHHHhh
Q 032278 29 HALTLLSFQDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVACLK 106 (144)
Q Consensus 29 l~~~~WS~EDVa~WLeeiGL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~~~~ 106 (144)
.++..||++||+.||+.+||++|.+.|.+|+|||..|+.|+. +-|..++. .+.||+.+++..++.+|.+.-|
T Consensus 2 ~~v~~Ws~~~V~~WL~~~gl~~y~~~F~~~~i~g~~Ll~l~~----~dL~~lGI--~~~g~r~kil~~i~~L~~~~ek 73 (74)
T 2gle_A 2 HMVHEWSVQQVSHWLVGLSLDQYVSEFSAQNISGEQLLQLDG----NKLKALGM--TSSQDRALVKKKLKEMKMSLEK 73 (74)
T ss_dssp CCGGGCCSGGGHHHHHHTTTHHHHHHHTTTTCCHHHHHTCCH----HHHHTTTC--CCHHHHHHHHHHHHSHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHCCCHHHHHHHHHcCCCHHHHhhCCH----HHHHHcCC--CCHHHHHHHHHHHHHHHHHhhc
Confidence 457899999999999999999999999999999999999953 33555554 5699999999999999987655
No 3
>3bq7_A Diacylglycerol kinase delta; SAM domain, polymerization domain, alternative splicing, cytoplasm, membrane, metal-binding, phorbol-ester binding; 2.90A {Homo sapiens}
Probab=99.63 E-value=3.4e-16 Score=106.24 Aligned_cols=70 Identities=20% Similarity=0.398 Sum_probs=60.1
Q ss_pred cccccCCChhHHHHHHHhcCcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHH
Q 032278 28 PHALTLLSFQDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVA 103 (144)
Q Consensus 28 ~l~~~~WS~EDVa~WLeeiGL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~ 103 (144)
+.++..||++||++||+.+||++|.+.|.+|+|||..|..|| ++-|..|+. .+.|++.+++..++.++..
T Consensus 4 ~~~v~~Ws~~~V~~WL~~lgl~~Y~~~F~~~~idg~~Ll~Lt----~~dL~~lGI--~~~ghr~kIl~aI~~L~~~ 73 (81)
T 3bq7_A 4 TRPVHLWGTEEVAAWLEHLSLCEYKDIFTRHDIRGSGLLHLE----RRDLKDLGV--TKVGHMKRILCGIKELSRS 73 (81)
T ss_dssp -CCGGGCCHHHHHHHHHHTTCGGGHHHHHHTTCCHHHHTTCC----HHHHHHTTC--CCHHHHHHHHHHHHHHHC-
T ss_pred CCChhhCCHHHHHHHHHHCCCHHHHHHHHHcCCCHHHHCcCC----HHHHhHcCC--CCHHHHHHHHHHHHHHHHH
Confidence 567899999999999999999999999999999999999984 344555665 7899999999999988754
No 4
>2f3n_A SH3 and multiple ankyrin repeat domains 3; postsynaptic density, SAM domain, shank, scaffolding protein, structural protein; 2.10A {Rattus norvegicus} SCOP: a.60.1.2 PDB: 2f44_A
Probab=99.62 E-value=3.6e-16 Score=105.03 Aligned_cols=66 Identities=29% Similarity=0.451 Sum_probs=56.8
Q ss_pred ccCCChhHHHHHHHhcCcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHH
Q 032278 31 LTLLSFQDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKV 102 (144)
Q Consensus 31 ~~~WS~EDVa~WLeeiGL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv 102 (144)
+..||++||++||+.+||++|.+.|.+|+|||..|..|| ++-|..++. .+.|++.+++..++.++-
T Consensus 2 v~~Ws~~~V~~WL~~lgl~~Y~~~F~~~~idg~~Ll~Lt----~~dL~~lGI--~~~Ghr~kIl~aI~~l~~ 67 (76)
T 2f3n_A 2 LQLWSKFDVGDWLESIHLGEHRDRFEDHEIEGAHLPALT----KEDFVELGV--TRVGHRENIERALRQLDG 67 (76)
T ss_dssp GGGCCHHHHHHHHHHTTCGGGHHHHHHTTCCGGGGGGCC----HHHHHHTTC--CCHHHHHHHHHHHHTC--
T ss_pred hhhCCHHHHHHHHHHCCCHHHHHHHHHcCCCHHHHccCC----HHHHHHcCC--CChhHHHHHHHHHHHHHH
Confidence 678999999999999999999999999999999999994 444566665 679999999999988763
No 5
>3bs5_A Protein aveugle; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Drosophila melanogaster}
Probab=99.62 E-value=4.6e-16 Score=111.67 Aligned_cols=72 Identities=21% Similarity=0.348 Sum_probs=63.4
Q ss_pred CcccccCCChhHHHHHHHhc--CcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHHH
Q 032278 27 MPHALTLLSFQDVGLWLEEI--NLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVAC 104 (144)
Q Consensus 27 ~~l~~~~WS~EDVa~WLeei--GL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~~ 104 (144)
.+.++..||++||+.||+.+ ||++|.+.|++|+|+|+.|+.| +++-|+.++. .+.||+.++..+|+.+|...
T Consensus 19 ~~~~v~~Wt~~~V~~WL~~~~~gl~~Y~~~F~~~~I~G~~Ll~L----t~~dLk~LGI--~~~GhR~kIl~~I~~Lr~~~ 92 (106)
T 3bs5_A 19 RPKAVYLWTVSDVLKWYRRHCGEYTQYEQLFAQHDITGRALLRI----TDSSLQRMGV--TDNRDREAIWREIVKQRLKT 92 (106)
T ss_dssp -CCCGGGCCHHHHHHHHHHHSGGGGGGHHHHHHTTCCHHHHTTC----CHHHHHHHTC--CCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHHcchHHHHHHHHHcCccHHHHhhC----CHHHHHhcCC--CCHHHHHHHHHHHHHHHHHh
Confidence 35678999999999999999 9999999999999999999999 4455666766 88999999999999998654
No 6
>1v85_A Similar to ring finger protein 36; apoptosis, neuron, cell death, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=99.60 E-value=4.4e-16 Score=108.12 Aligned_cols=70 Identities=24% Similarity=0.343 Sum_probs=60.9
Q ss_pred cccccCCChhHHHHHHHhcCc--chHHHHhhHcCcChhhhccCcccchHHHHHH--HhHhhhccchHHHHHHHHHHHHHH
Q 032278 28 PHALTLLSFQDVGLWLEEINL--GGYRQIFKENGVNGEYLEGMSMFTTEQILRF--IRRCHMKWGDFITLCKELRRIKVA 103 (144)
Q Consensus 28 ~l~~~~WS~EDVa~WLeeiGL--~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~--i~r~~~k~gd~itl~~el~~~kv~ 103 (144)
..++..||+|||+.||+.+|| ++|.+.|.+|+|||+.|+.|| ++-|+- ++. .+.||+.+++.+|+.+|..
T Consensus 14 ~~~v~~Wt~~dV~~WL~~~gl~~~~Y~~~F~~~~IdG~~Ll~Lt----~~dL~~~~LGI--~~~g~r~~il~~I~~Lr~~ 87 (91)
T 1v85_A 14 HKAVDKWTTEEVVLWLEQLGPWASLYRDRFLSERVNGRLLLTLT----EEEFSRAPYTI--ENSSHRRVILTELERVRSG 87 (91)
T ss_dssp HSCGGGCCHHHHHHHHHHHCGGGHHHHHHHHHTTCCHHHHHHCC----HHHHHSTTTCC--CCHHHHHHHHHHHHHHHSC
T ss_pred CCCcccCCHHHHHHHHHHcCCCHHHHHHHHHHhCCCHHHHhcCC----HHHHhccCCCC--CCHHHHHHHHHHHHHHHhc
Confidence 457899999999999999999 999999999999999999994 444443 554 7899999999999999853
No 7
>2e8o_A SAM domain and HD domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=7.3e-16 Score=109.04 Aligned_cols=68 Identities=15% Similarity=0.165 Sum_probs=60.8
Q ss_pred cccccCCChhHHHHHHHhcCcch--HHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHH
Q 032278 28 PHALTLLSFQDVGLWLEEINLGG--YRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIK 101 (144)
Q Consensus 28 ~l~~~~WS~EDVa~WLeeiGL~q--Yre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~k 101 (144)
..++..||+|||+.||+++||++ |.+.|++|+|||..|+.|+ ++-|+.++. .+.||+.+++.+|+.++
T Consensus 24 ~~~v~~Ws~~~V~~WL~~lgl~~~~y~~~F~~~~I~G~~Ll~Lt----~~dLkeLGI--~~~G~R~kil~~I~~Lr 93 (103)
T 2e8o_A 24 HPDYKTWGPEQVCSFLRRGGFEEPVLLKNIRENEITGALLPCLD----ESRFENLGV--SSLGERKKLLSYIQRLV 93 (103)
T ss_dssp CSCGGGCHHHHHHHHHHHHTCCCHHHHHHHHHTTCCTTTTTTCC----HHHHHHTTC--CCHHHHHHHHHHHHHHH
T ss_pred ccChhhCCHHHHHHHHHHcCCChHHHHHHHHHcCCCHHHHHhCC----HHHHHHcCC--CCHHHHHHHHHHHHHHH
Confidence 56889999999999999999999 9999999999999999995 555666665 68999999999999886
No 8
>3bs5_B Connector enhancer of kinase suppressor of RAS 2; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Homo sapiens}
Probab=99.59 E-value=1.4e-15 Score=101.78 Aligned_cols=70 Identities=16% Similarity=0.211 Sum_probs=60.9
Q ss_pred cccCCChhHHHHHHHhc--CcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHHHh
Q 032278 30 ALTLLSFQDVGLWLEEI--NLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVACL 105 (144)
Q Consensus 30 ~~~~WS~EDVa~WLeei--GL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~~~ 105 (144)
++..||++||+.||+.+ ||++|.+.|.+|+|+|+.|+.|| ++-|+.++. .+.||+.++...++.++-.+.
T Consensus 3 ~v~~Ws~~~V~~WL~~l~~gl~~Y~~~F~~~~i~G~~Ll~L~----~~dL~~lGI--~~~ghr~~il~~I~~L~~~~~ 74 (80)
T 3bs5_B 3 PVSKWSPSQVVDWMKGLDDCLQQYIKNFEREKISGDQLLRIT----HQELEDLGV--SRIGHQELILEAVDLLCALNY 74 (80)
T ss_dssp CGGGCCHHHHHHHHHTSCGGGGGGHHHHHHHTCCHHHHHTCC----HHHHHHTTC--CCHHHHHHHHHHHHHHHHHHT
T ss_pred ccccCCHHHHHHHHHHHhhhHHHHHHHHHHcCCCHHHHHHCC----HHHHHHcCC--CCHHHHHHHHHHHHHHHHhhh
Confidence 57899999999999999 69999999999999999999994 444555555 789999999999999987654
No 9
>2ean_A Connector enhancer of kinase suppressor of RAS 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=2.2e-15 Score=101.91 Aligned_cols=72 Identities=15% Similarity=0.198 Sum_probs=61.9
Q ss_pred cccccCCChhHHHHHHHhc--CcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHHHh
Q 032278 28 PHALTLLSFQDVGLWLEEI--NLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVACL 105 (144)
Q Consensus 28 ~l~~~~WS~EDVa~WLeei--GL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~~~ 105 (144)
..++..||++||++||+.+ ||++|.+.|.+|+|+|+.|+.|+ ++-|+-++. .+.||+.++..+++.++-.+.
T Consensus 5 ~~~v~~Wt~~~V~~WL~~l~~gl~~Y~~~F~~~~I~G~~Ll~Lt----~~dL~~LGI--~~~ghr~~il~~I~~L~~~~~ 78 (83)
T 2ean_A 5 SSGVSKWSPSQVVDWMKGLDDCLQQYIKNFEREKISGDQLLRIT----HQELEDLGV--SRIGHQELILEAVDLLCALNS 78 (83)
T ss_dssp CCSGGGCCTTHHHHHHTTSCGGGTTTHHHHHHHTCCHHHHTTCC----HHHHHHHTC--CCSHHHHHHHHHHHHHHHHHH
T ss_pred CCccccCCHHHHHHHHHHHHhhHHHHHHHHHHCCCCHHHHhhCC----HHHHHHhCC--CCHHHHHHHHHHHHHHHHHhh
Confidence 4578999999999999999 69999999999999999999994 444455655 799999999999999886553
No 10
>1pk1_B Sex COMB on midleg CG9495-PA; hetero SAM domain, polymers, transcriptional repression, transcription repression; 1.80A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk3_A
Probab=99.56 E-value=2.7e-15 Score=105.66 Aligned_cols=70 Identities=14% Similarity=0.378 Sum_probs=59.8
Q ss_pred cccccCCChhHHHHHHHhc--CcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHH
Q 032278 28 PHALTLLSFQDVGLWLEEI--NLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVA 103 (144)
Q Consensus 28 ~l~~~~WS~EDVa~WLeei--GL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~ 103 (144)
+..+..||+|||++||+.+ ||++|.+.|++|+|||+.|+.||. +.++.+++ +|.|+.++++..+.++|-|
T Consensus 11 ~~~v~~WsvedV~~wl~~~~~g~~~y~~~F~~~eIDG~aLL~Lt~---~dl~~~mg---iklGpalKi~~~I~~lk~~ 82 (89)
T 1pk1_B 11 RSQPIDWTIEEVIQYIESNDNSLAVHGDLFRKHEIDGKALLRLNS---ERMMKYMG---LKLGPALKICNLVNKVNGR 82 (89)
T ss_dssp CCCGGGCCHHHHHHHHHHHCGGGGGGHHHHHHTTCCHHHHHTCCH---HHHHHHSC---CCHHHHHHHHHHHHHHC--
T ss_pred CCCchhCCHHHHHHHHHHHccchHHHHHHHHHcCcChHHHhcCCH---HHHHHccC---CCccHHHHHHHHHHHHHcc
Confidence 4577899999999999999 899999999999999999999954 33555544 7999999999999998865
No 11
>2d8c_A Phosphatidylcholine:ceramide cholinephosphotransferase 1; cell-free protein synthesis, protein regulation, lipid metabolism, structural genomics; NMR {Mus musculus} SCOP: a.60.1.2
Probab=99.56 E-value=2e-15 Score=107.88 Aligned_cols=71 Identities=17% Similarity=0.221 Sum_probs=60.5
Q ss_pred cccccCCChhHHHHHHHhcCcchHHHHhhHcCcChhhhccCcccchHHHHHH--HhHhhhccchHHHHHHHHHHHHHHHh
Q 032278 28 PHALTLLSFQDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRF--IRRCHMKWGDFITLCKELRRIKVACL 105 (144)
Q Consensus 28 ~l~~~~WS~EDVa~WLeeiGL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~--i~r~~~k~gd~itl~~el~~~kv~~~ 105 (144)
..++..||+|||++||+++||++|.+.| .| |||+.|+.|| +.-|+. +++ .+.||+..|..+|+++|-.+.
T Consensus 14 ~~~v~~Ws~edV~~WL~~~Gl~~Y~~~F-~~-IdG~~LL~Lt----~~dLk~~~LgI--~~~g~rkkl~~~I~~L~~~~~ 85 (97)
T 2d8c_A 14 MKEVVYWSPKKVADWLLENAMPEYCEPL-EH-FTGQDLINLT----QEDFKKPPLYR--VSSDNGQRLLDMIETLKMEHH 85 (97)
T ss_dssp CSCCSSCCTTHHHHHHHHTTCTTTTTTT-TT-CCHHHHHTCC----HHHHHSSSSSS--CSTTTTHHHHHHHHHHHHHSC
T ss_pred CCchhhCCHHHHHHHHHHcCCHHHHHHH-Hc-CCCHHHhcCC----HHHHhhCCCCC--CCHHHHHHHHHHHHHHHHHhH
Confidence 5678999999999999999999999999 57 9999999994 444444 444 899999999999999996554
Q ss_pred h
Q 032278 106 K 106 (144)
Q Consensus 106 ~ 106 (144)
.
T Consensus 86 ~ 86 (97)
T 2d8c_A 86 M 86 (97)
T ss_dssp C
T ss_pred H
Confidence 3
No 12
>1kw4_A Polyhomeotic; SAM domain, polycomb group, polymer, DNA binding protein; 1.75A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk1_A
Probab=99.55 E-value=2.2e-15 Score=105.49 Aligned_cols=70 Identities=20% Similarity=0.311 Sum_probs=58.6
Q ss_pred cccccCCChhHHHHHHHhc-CcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHH
Q 032278 28 PHALTLLSFQDVGLWLEEI-NLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVA 103 (144)
Q Consensus 28 ~l~~~~WS~EDVa~WLeei-GL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~ 103 (144)
+.++..||+|||+.||+.+ ||++|.+.|++|+|||+.|+.||.. -| ...+-+|.|++.+++..|+++|-+
T Consensus 11 ~~~v~~Ws~edV~~wL~~l~gl~~y~~~F~~~~IdG~~LL~Lt~~----dL--~k~lgIklG~r~kI~~~I~~L~~~ 81 (89)
T 1kw4_A 11 RPPISSWSVDDVSNFIRELPGCQDYVDDFIQQEIDGQALLRLKEK----HL--VNAMGMKLGPALKIVAKVESIKEV 81 (89)
T ss_dssp CCCGGGCCHHHHHHHHHTSTTCGGGHHHHHHTTCCHHHHHHCCHH----HH--HTTTCCCHHHHHHHHHHHHHHC--
T ss_pred CCCchhCCHHHHHHHHHHCcChHHHHHHHHHhCccHHHHhcCCHH----HH--HHHcCCCHHHHHHHHHHHHHHHHH
Confidence 3478999999999999999 9999999999999999999999543 22 134556999999999999998754
No 13
>1wwv_A Connector enhancer of kinase suppressor of RAS 1; structural genomics, protein regulation, transcription; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=99.36 E-value=2.8e-13 Score=95.69 Aligned_cols=69 Identities=14% Similarity=0.232 Sum_probs=60.0
Q ss_pred cccccCCChhHHHHHHHhc--CcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHHH
Q 032278 28 PHALTLLSFQDVGLWLEEI--NLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVAC 104 (144)
Q Consensus 28 ~l~~~~WS~EDVa~WLeei--GL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~~ 104 (144)
..++..||++||++||+.+ |+++| .|++|+|+|+.|++|+....+. ++. .+.||+-++...++.++-.+
T Consensus 8 ~~~v~~Wt~~~V~~WL~~l~~~l~~Y--~F~~~~I~G~~LL~Lt~~dL~~----LGI--~~~Ghr~~Il~~I~~L~~~~ 78 (91)
T 1wwv_A 8 MEPVETWTPGKVATWLRGLDDSLQDY--PFEDWQLPGKNLLQLCPQSLEA----LAV--RSLGHQELILGGVEQLQALS 78 (91)
T ss_dssp CCCTTTCCTTTHHHHHHHHCHHHHTS--CHHHHCCCHHHHTTCCTTTGGG----GTC--CCHHHHHHHHHHHHHHHHHH
T ss_pred CCccccCCHHHHHHHHHhcCCccccc--cHHhcCccHHHHhhCCHHHHHH----cCC--CcHhHHHHHHHHHHHHHHHh
Confidence 3478999999999999955 99999 7999999999999997776553 554 89999999999999998766
No 14
>2ke7_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, alternative splicing, ANK repeat, cell junction, cell membrane; NMR {Homo sapiens}
Probab=99.34 E-value=2.9e-13 Score=96.07 Aligned_cols=83 Identities=20% Similarity=0.268 Sum_probs=52.5
Q ss_pred cccccCCChhHHHHHHHhcCcchHHHHhhHcCcChhhhc---cCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHHH
Q 032278 28 PHALTLLSFQDVGLWLEEINLGGYRQIFKENGVNGEYLE---GMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVAC 104 (144)
Q Consensus 28 ~l~~~~WS~EDVa~WLeeiGL~qYre~Fk~NnIdG~eLi---~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~~ 104 (144)
..+...|++++|++||+.+||++|.+.|.+|+|+|.+++ .| +++-|..|+. .+.||+-++++.++.++
T Consensus 14 ~~~~~~w~~~~V~~WL~~igL~qY~~~F~~~gid~~~~l~~~~l----t~~DL~~lGI--~~~GhRkkIl~ai~~L~--- 84 (103)
T 2ke7_A 14 EMNGPRCPVQTVGQWLESIGLPQYENHLMANGFDNVQFMGSNVM----EDQDLLEIGI--LNSGHRQRILQAIQLLP--- 84 (103)
T ss_dssp ---------CCTTHHHHHTTCTTCHHHHHHTTCCCHHHHHTTCC----CHHHHHHHTC--CCHHHHHHHHHHHHHSC---
T ss_pred cccccCCCHhHHHHHHHHCCCHHHHHHHHHcCCCcHHHHhcccC----CHHHHhHCCC--CCHHHHHHHHHHHHHHH---
Confidence 456689999999999999999999999999999999986 77 4455666776 88999999999998875
Q ss_pred hhCcccccCCCCCCcch
Q 032278 105 LKGEQKVRRPWWAPSCL 121 (144)
Q Consensus 105 ~~~~~~~~~~~w~p~~~ 121 (144)
.-++...+-+.|+.+
T Consensus 85 --~~~~~~~~~~~P~~~ 99 (103)
T 2ke7_A 85 --KMRPIGHDGYHPTSV 99 (103)
T ss_dssp --C--------------
T ss_pred --hcccccCCCCCCcCH
Confidence 223556677888654
No 15
>2e8n_A Ephrin type-A receptor 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.29 E-value=4.5e-12 Score=87.39 Aligned_cols=81 Identities=23% Similarity=0.233 Sum_probs=67.1
Q ss_pred cccCCC-hhHHHHHHHhcCcchHHHHhhHcCcC-hhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHHHhhC
Q 032278 30 ALTLLS-FQDVGLWLEEINLGGYRQIFKENGVN-GEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVACLKG 107 (144)
Q Consensus 30 ~~~~WS-~EDVa~WLeeiGL~qYre~Fk~NnId-G~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~~~~~ 107 (144)
++.+++ .++|++||+.+||++|.+.|.+|+|+ ++.|..|+. +-|..|+. .+.||+-++++.++.++...
T Consensus 5 ~~p~~~~~~~V~~WL~~lgL~~Y~~~F~~~~~~~~~~l~~lt~----~dL~~lGI--~~~GhRkkIl~ai~~l~~~~--- 75 (88)
T 2e8n_A 5 SSGEGVPFRTVSEWLESIKMQQYTEHFMAAGYTAIEKVVQMTN----DDVKRIGV--RLPGHQKRIAYSLLGLKDQV--- 75 (88)
T ss_dssp CCCCCCSCSSHHHHHHHTTCGGGHHHHHHHTCSSHHHHTTSCT----THHHHTTC--CSHHHHHHHHHHHHHHHHHH---
T ss_pred CCCCCCchhhHHHHHHHCCCHHHHHHHHHcCCChHHHHHhCCH----HHHHHCCC--CChhHHHHHHHHHHHHHHhh---
Confidence 344554 58999999999999999999999999 899999944 44666666 78899999999999998664
Q ss_pred cccccCCCCCCcc
Q 032278 108 EQKVRRPWWAPSC 120 (144)
Q Consensus 108 ~~~~~~~~w~p~~ 120 (144)
..+..|.+.||.
T Consensus 76 -~~~~~p~~~~~~ 87 (88)
T 2e8n_A 76 -NTVGIPISGPSS 87 (88)
T ss_dssp -HCSSCCCCSSCC
T ss_pred -cccCCCCCCCCC
Confidence 366789999974
No 16
>1ow5_A Serine/threonine-protein kinase STE11; MAP kinase, MAPKKK, SAM domain, pointed domain, SCM domain, STE50 regulator, transferase; NMR {Saccharomyces cerevisiae} SCOP: a.60.1.2 PDB: 1x9x_A
Probab=99.22 E-value=6.1e-12 Score=90.56 Aligned_cols=59 Identities=24% Similarity=0.290 Sum_probs=55.3
Q ss_pred HHHHHHHhcCcchHHHHhhHcCcCh-hhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHH
Q 032278 38 DVGLWLEEINLGGYRQIFKENGVNG-EYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKV 102 (144)
Q Consensus 38 DVa~WLeeiGL~qYre~Fk~NnIdG-~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv 102 (144)
+|++||+++|++||.+.|.+|+|+| +.|..| +.++|.-|+. .|.||+|++++.++.+|-
T Consensus 17 ~v~~wL~si~c~qY~~~F~eN~I~g~d~L~eL----d~e~LkElGI--~kvGdRirIlk~vk~Lr~ 76 (85)
T 1ow5_A 17 FVQLFLEEIGCTQYLDSFIQCNLVTEEEIKYL----DKDILIALGV--NKIGDRLKILRKSKSFQR 76 (85)
T ss_dssp HHHHHHHHHSCTHHHHHHHHHTCCCHHHHHHC----CHHHHHHHTC--CCHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHcCChhHHHHHHHcCCCcHHHHHHc----CHHHHHHhCC--CcccHHHHHHHHHHHHHH
Confidence 8999999999999999999999999 999999 7888999998 999999999999888874
No 17
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}
Probab=99.20 E-value=1.7e-12 Score=100.30 Aligned_cols=65 Identities=18% Similarity=0.330 Sum_probs=48.2
Q ss_pred cccccCCChhHHHHHHHh-cCcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHH
Q 032278 28 PHALTLLSFQDVGLWLEE-INLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLC 94 (144)
Q Consensus 28 ~l~~~~WS~EDVa~WLee-iGL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~ 94 (144)
+..+.+||+|||++||+. .||+||+++|++|+|+|+.|++|+.--..-.+..+++ ..-+|+-++.
T Consensus 75 ~s~V~nWTvedV~~WL~~~v~LpqY~~~Fr~~~IdG~~LprL~~~~~~~L~~~LGI--~~~~hR~Kl~ 140 (150)
T 2l5y_A 75 TSEVHNWTLEDTLQWLIEFVELPQYEKNFRDNNVKGTTLPRIAVHEPSFMISQLKI--SDRSHRQKLQ 140 (150)
T ss_dssp TSHHHHCCHHHHHHHHHHHTCCTTSHHHHHHHHCSSSTTTTCCSSSCCSTTTTSSC--CCHHHHHHHH
T ss_pred cCcchhCCHHHHHHHHHHcCCcHHHHHHHHHcCCCHHHhhhhhhcchHHHHHHhCC--CCHHHHHHHH
Confidence 456789999999999988 4999999999999999999999987432222333333 3444444443
No 18
>2kso_A Ephrin type-A receptor 2; SAM domain, heterodimer, cell signaling, angiogenesis, apopt ATP-binding, cataract; NMR {Homo sapiens}
Probab=99.19 E-value=2.3e-11 Score=83.67 Aligned_cols=67 Identities=24% Similarity=0.225 Sum_probs=53.3
Q ss_pred cccCCChhHHHHHHHhcCcchHHHHhhHcCcC-hhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHH
Q 032278 30 ALTLLSFQDVGLWLEEINLGGYRQIFKENGVN-GEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKV 102 (144)
Q Consensus 30 ~~~~WS~EDVa~WLeeiGL~qYre~Fk~NnId-G~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv 102 (144)
.+..|+.++|++||+.+||++|.+.|.+|+|+ ++.|..| +++-|..|+. .+.|++-++++.++.++-
T Consensus 10 ~~~~~~~~~V~~WL~~lgL~qY~~~F~~~gid~~~~L~~l----t~~DL~~lGI--~~~GhRkkIl~ai~~Lr~ 77 (82)
T 2kso_A 10 LVPRGSHMTVSEWLESIKMQQYTEHFMAAGYTAIEKVVQM----TNDDIKRIGV--RLPGHQKRIAYSLLGLKD 77 (82)
T ss_dssp --------CHHHHHHHTTCTTHHHHHHHTTCCSHHHHTTC----CHHHHHHHHC--CCTTHHHHHHHHHHHHHH
T ss_pred CCCCCCcchHHHHHHHCCCHHHHHHHHHcCCChHHHHHhC----CHHHHHHCCC--CChhHHHHHHHHHHHHHH
Confidence 35668999999999999999999999999999 9999999 4555677776 889999999999998874
No 19
>3tad_C Liprin-beta-1; protein binding; 2.90A {Mus musculus}
Probab=99.14 E-value=2.9e-11 Score=99.83 Aligned_cols=71 Identities=18% Similarity=0.149 Sum_probs=59.3
Q ss_pred CcccccCCChhHHHHHHHhcCcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHH
Q 032278 27 MPHALTLLSFQDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKV 102 (144)
Q Consensus 27 ~~l~~~~WS~EDVa~WLeeiGL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv 102 (144)
....+.+|+.|+|++||+++||++|++.|++|.+||..|.+|| .+.+-+-|+. .+=||+-+|.-+|+.++-
T Consensus 11 ~~~p~~~W~~e~V~~WLe~~GL~~Y~~~f~~n~~dG~~Ll~lt---~~dLe~eLGI--~nplHRkKL~laI~el~~ 81 (265)
T 3tad_C 11 LDMPFAKWTKEQVCSWLAEQGLGSYLSSGKHWIISGQTLLQAS---QQDLEKELGI--KHSLHRKKLQLALQALGS 81 (265)
T ss_dssp ---CGGGSCHHHHHHHHHHTTCCTTHHHHTTTCSCSHHHHHSC---HHHHHHHTCC--CSHHHHHHHHHHHHHHHH
T ss_pred CCCChhhCChHHHHHHHHHHCHHHHHHHHHHhCCchHHHHhCC---HHHHHHHhCC--CCHHHHHHHHHHHHHhcc
Confidence 4568999999999999999999999999999999999999884 4444456776 778899999888888874
No 20
>2eam_A Putative 47 kDa protein; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.13 E-value=1.8e-11 Score=82.77 Aligned_cols=64 Identities=23% Similarity=0.272 Sum_probs=53.6
Q ss_pred cCCChhHHHHHHHhcCcchHHHHhhHcCcChhhhc---cCcccchHHHHHHHhHhhhccchHHHHHHHHHHHH
Q 032278 32 TLLSFQDVGLWLEEINLGGYRQIFKENGVNGEYLE---GMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIK 101 (144)
Q Consensus 32 ~~WS~EDVa~WLeeiGL~qYre~Fk~NnIdG~eLi---~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~k 101 (144)
..++.++|++||+.+||++|.+.|.+|+|+|.+++ .||.. -|..|+. .+.||+-++++.++.++
T Consensus 8 ~~~~~~~V~~WL~~lgL~~Y~~~F~~~~i~~~~~l~~~~lt~~----dL~~lGI--~~~ghR~kIl~ai~~L~ 74 (80)
T 2eam_A 8 PRCPVQTVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQ----DLLEIGI--LNSGHRQRILQAIQLLP 74 (80)
T ss_dssp CCCCCCCHHHHHHHHTCGGGHHHHHHTTCCCTTTSSSSSSCTT----HHHHSSC--CCHHHHHHHHHHHHHSC
T ss_pred CCCChhHHHHHHHHCCCHHHHHHHHHcCCChHHHHhhccCCHH----HHHHCCC--CCHHHHHHHHHHHHHHh
Confidence 34778999999999999999999999999999886 67433 3455665 78999999999998876
No 21
>2kg5_A ARF-GAP, RHO-GAP domain, ANK repeat and PH domain-containing protein 3; SAM domain, helix bundle, cell membrane, cell projection, cytoplasm; NMR {Homo sapiens}
Probab=99.12 E-value=4e-11 Score=85.71 Aligned_cols=66 Identities=17% Similarity=0.304 Sum_probs=57.3
Q ss_pred ccCCChhHHHHHHHhcCcchHHHHhhHcCcC-hhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHH
Q 032278 31 LTLLSFQDVGLWLEEINLGGYRQIFKENGVN-GEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKV 102 (144)
Q Consensus 31 ~~~WS~EDVa~WLeeiGL~qYre~Fk~NnId-G~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv 102 (144)
...++.++|++||+.+||++|.+.|.+|+|+ |+.|..| +++-|.-|+. .+.||+-++++.++.++.
T Consensus 21 m~~~~~~~V~~WL~~lgL~qY~~~F~~~gid~~~~L~~L----t~eDLkeLGI--t~~GhRkkIL~aI~~Lr~ 87 (100)
T 2kg5_A 21 MAAPQDLDIAVWLATVHLEQYADTFRRHGLATAGAARGL----GHEELKQLGI--SATGHRKRILRLLQTGTE 87 (100)
T ss_dssp CSCCTTCBHHHHHGGGTCGGGHHHHHHTTCCBHHHHTTC----CHHHHHHHTC--CCHHHHHHHHHHHTTTTT
T ss_pred cCCCCcChHHHHHHHCCCHHHHHHHHHcCCChHHHHHhc----CHHHHHHCCC--CChhHHHHHHHHHHHHHh
Confidence 4567889999999999999999999999999 9999999 4455666776 789999999999988773
No 22
>2qkq_A Ephrin type-B receptor 4; ATP-binding, glycoprotein, kinase, membrane, nucleotide- binding, phosphorylation, repeat, signal, transferase; 2.10A {Homo sapiens}
Probab=99.10 E-value=4.8e-11 Score=81.11 Aligned_cols=67 Identities=24% Similarity=0.347 Sum_probs=52.7
Q ss_pred ccCCC-hhHHHHHHHhcCcchHHHHhhHcC-cChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHH
Q 032278 31 LTLLS-FQDVGLWLEEINLGGYRQIFKENG-VNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVA 103 (144)
Q Consensus 31 ~~~WS-~EDVa~WLeeiGL~qYre~Fk~Nn-IdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~ 103 (144)
+.+|+ .++|++||+.+||++|.+.|.+|+ |+|+.|..| +++-|.-|+. .+.||+-++++.++.+|-.
T Consensus 9 ~p~~~~~~~V~~WL~~lgL~~Y~~~F~~~~~~~~~~l~~l----t~~dL~~lGI--~~~GhrkkIl~ai~~l~~~ 77 (83)
T 2qkq_A 9 QPHYSAFGSVGEWLRAIKMGRYEESFAAAGFGSFELVSQI----SAEDLLRIGV--TLAGHQKKILASVQHMKSQ 77 (83)
T ss_dssp -----CCSSHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTC----CHHHHHHHTC--CCHHHHHHHHHHHTTC---
T ss_pred CCCCCccchHHHHHHHCCCHHHHHHHHHcCCCcHHHHhhC----CHHHHHHCCC--CCHHHHHHHHHHHHHHHHH
Confidence 34554 689999999999999999999999 999999999 5555566666 7799999999999887744
No 23
>1ucv_A Ephrin type-A receptor 8; receptor oligomerization, developmental regulation, tyrosine kinase, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=99.09 E-value=9.4e-11 Score=79.72 Aligned_cols=64 Identities=23% Similarity=0.348 Sum_probs=55.0
Q ss_pred ChhHHHHHHHhcCcchHHHHhhHcCcC-hhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHHH
Q 032278 35 SFQDVGLWLEEINLGGYRQIFKENGVN-GEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVAC 104 (144)
Q Consensus 35 S~EDVa~WLeeiGL~qYre~Fk~NnId-G~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~~ 104 (144)
+.++|++||+.+||++|.+.|.+|+|+ ++.|..| +++-|.-|+. .+.||+-++++.++.++-..
T Consensus 6 ~~~~V~~WL~~lgL~~Y~~~F~~~~~d~~~~l~~l----t~~DL~~lGI--~~~GhrkkIl~ai~~l~~~~ 70 (81)
T 1ucv_A 6 SGLTVGDWLDSIRMGRYRDHFAAGGYSSLGMVLRM----NAQDVRALGI--TLMGHQKKILGSIQTMRAQL 70 (81)
T ss_dssp CCSBHHHHHHHTTCGGGHHHHHHTTCCBHHHHTTC----CHHHHHHHTC--CCHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHCCCHHHHHHHHHcCCChHHHHHHc----CHHHHHhCCC--CChhHHHHHHHHHHHHHHHH
Confidence 367999999999999999999999999 7899998 4555566666 78899999999999988654
No 24
>2k4p_A Phosphatidylinositol-3,4,5-trisphosphate 5- phosphatase 2; helix bundle, signaling protein, actin-binding, alternative splicing, cell adhesion; NMR {Homo sapiens} PDB: 2kso_B
Probab=99.08 E-value=4.6e-11 Score=83.72 Aligned_cols=68 Identities=24% Similarity=0.257 Sum_probs=56.1
Q ss_pred cccccCCChhHHHHHHHhcCcchHHHHhhHcCcCh-hhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHH
Q 032278 28 PHALTLLSFQDVGLWLEEINLGGYRQIFKENGVNG-EYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIK 101 (144)
Q Consensus 28 ~l~~~~WS~EDVa~WLeeiGL~qYre~Fk~NnIdG-~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~k 101 (144)
+.....|++++|++||+.+||++|.+.|.+|+|++ +.|..| +++-|..|+. .+.|++-++++.++.+|
T Consensus 18 ~~~~~~~~~~~V~eWL~~lgL~qY~~~F~~~g~~~le~l~~l----t~~DL~~lGI--t~~GHRkkIL~aI~~LK 86 (86)
T 2k4p_A 18 GSHMSGLGEAGMSAWLRAIGLERYEEGLVHNGWDDLEFLSDI----TEEDLEEAGV--QDPAHKRLLLDTLQLSK 86 (86)
T ss_dssp ----CCCCSCSSHHHHHTTTCGGGHHHHHTTTCCCHHHHTTC----CHHHHHHTTC--CCHHHHHHHHHHHHHCC
T ss_pred CCcCCCCCcCcHHHHHHHCCCHHHHHHHHHcCCChHHHHHhC----CHHHHHHCCC--CCHHHHHHHHHHHHHcC
Confidence 44567899999999999999999999999999975 777777 5555677776 78999999999988876
No 25
>1b4f_A EPHB2; SAM domain, EPH receptor, signal transduction, oligomer; 1.95A {Homo sapiens} SCOP: a.60.1.2 PDB: 1f0m_A 1sgg_A
Probab=99.08 E-value=1.1e-10 Score=78.98 Aligned_cols=67 Identities=19% Similarity=0.331 Sum_probs=56.7
Q ss_pred cCC-ChhHHHHHHHhcCcchHHHHhhHcCc-ChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHHH
Q 032278 32 TLL-SFQDVGLWLEEINLGGYRQIFKENGV-NGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVAC 104 (144)
Q Consensus 32 ~~W-S~EDVa~WLeeiGL~qYre~Fk~NnI-dG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~~ 104 (144)
.+| +.++|++||+.+||++|.+.|.+|+| +++.|..| +++-|..|+. .+.||+-++++.++.++-..
T Consensus 6 p~~~~~~~v~~WL~~lgL~~Y~~~F~~~~~~~~~~l~~l----t~~dL~~lGI--~~~GhrkkIl~ai~~l~~~~ 74 (82)
T 1b4f_A 6 PDYTSFNTVDEWLEAIKMGQYKESFANAGFTSFDVVSQM----MMEDILRVGV--TLAGHQKKILNSIQVMRAQM 74 (82)
T ss_dssp CCCCCCSSHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTC----CHHHHHHTTC--CCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccHHHHHHHHCCCHHHHHHHHHcCCCCHHHHHhC----CHHHHHHcCC--CCHHHHHHHHHHHHHHHHHH
Confidence 344 46799999999999999999999999 78999999 5555666776 78899999999999988544
No 26
>2dl0_A SAM and SH3 domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.07 E-value=8.7e-11 Score=83.56 Aligned_cols=68 Identities=16% Similarity=0.172 Sum_probs=57.7
Q ss_pred cccccCCChhHHHHHHHhcCcchHHHHhhHcCcCh-hhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHH
Q 032278 28 PHALTLLSFQDVGLWLEEINLGGYRQIFKENGVNG-EYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIK 101 (144)
Q Consensus 28 ~l~~~~WS~EDVa~WLeeiGL~qYre~Fk~NnIdG-~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~k 101 (144)
+.....|+.++|++||+.+||+||.+.|.+|++++ +.|.+| +++-|..|+. .+-||+-+++..++.++
T Consensus 15 ~~p~~~~~~~sV~eWL~~igL~qY~~~F~~~g~d~le~l~~l----t~~DL~~lGI--t~~gHrkkIl~ai~~lr 83 (97)
T 2dl0_A 15 RKPVSPGCISSVSDWLISIGLPMYAGTLSTAGFSTLSQVPSL----SHTCLQEAGI--TEERHIRKLLSAARLFK 83 (97)
T ss_dssp CCCCCCSCCCSHHHHHHHHTCGGGHHHHHHHTCCSTTSGGGC----CHHHHHHHTC--CCHHHHHHHHHHHHTCC
T ss_pred cCCCCccccCcHHHHHHHCCCHHHHHHHHHcCCCcHHHHHhc----CHHHHHHCCC--CCHHHHHHHHHHHHHHH
Confidence 44567799999999999999999999999999998 678887 4555666766 78899999998888765
No 27
>2eao_A Ephrin type-B receptor 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.07 E-value=1.2e-10 Score=81.96 Aligned_cols=65 Identities=23% Similarity=0.321 Sum_probs=56.4
Q ss_pred CChhHHHHHHHhcCcchHHHHhhHcCcC-hhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHHH
Q 032278 34 LSFQDVGLWLEEINLGGYRQIFKENGVN-GEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVAC 104 (144)
Q Consensus 34 WS~EDVa~WLeeiGL~qYre~Fk~NnId-G~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~~ 104 (144)
-+.++|++||+.+||++|.+.|.+|+|+ ++.|..| +++-|..|+. .+.||+-++++.++.++-..
T Consensus 20 ~~~~~V~~WL~~lgL~~Y~~~F~~~~~~~~~~L~~l----t~~DL~~lGI--~~~GhRkkIl~ai~~l~~~~ 85 (99)
T 2eao_A 20 TAFTTVDDWLSAIKMVQYRDSFLTAGFTSLQLVTQM----TSEDLLRIGI--TLAGHQKKILNSIHSMRVQI 85 (99)
T ss_dssp TSCCBHHHHHHTTTCGGGHHHHHHHTCCBHHHHTTC----CHHHHHHHTC--CCHHHHHHHHHHHHHHHHHS
T ss_pred cchHHHHHHHHHCCcHHHHHHHHHcCCChHHHHhhC----CHHHHHHCCC--CChhHHHHHHHHHHHHHHHh
Confidence 3578999999999999999999999999 8999999 4555666776 78999999999999988554
No 28
>3h8m_A Ephrin type-A receptor 7; SAM domain, kinase,structural genomics, structural genomics consortium, SGC, alternative splicing, ATP-binding; 2.10A {Homo sapiens}
Probab=99.03 E-value=2e-10 Score=80.74 Aligned_cols=65 Identities=20% Similarity=0.357 Sum_probs=56.0
Q ss_pred cCCChhHHHHHHHhcCcchHHHHhhHcCcC-hhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHH
Q 032278 32 TLLSFQDVGLWLEEINLGGYRQIFKENGVN-GEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKV 102 (144)
Q Consensus 32 ~~WS~EDVa~WLeeiGL~qYre~Fk~NnId-G~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv 102 (144)
.-+++++|++||+.+||++|.+.|.+|+|+ ++.|..|| ++-|.-|+. .+.|++-++++.++.++-
T Consensus 21 ~~~~~~~V~~WL~~lgL~qY~~~F~~~g~d~~e~l~~lt----~~DL~~lGI--t~~GHRkkIL~ai~~Lr~ 86 (90)
T 3h8m_A 21 DFTTFCSVGEWLQAIKMERYKDNFTAAGYNSLESVARMT----IEDVMSLGI--TLVGHQKKIMSSIQTMRA 86 (90)
T ss_dssp CCCCCSSHHHHHHHTTCGGGHHHHHHTTCCSHHHHHTCC----HHHHHHTTC--CCHHHHHHHHHHHHHHHH
T ss_pred CCcchhHHHHHHHHCChHHHHHHHHHcCCChHHHHhhCC----HHHHHHCCC--CCHHHHHHHHHHHHHHHH
Confidence 457889999999999999999999999999 88888883 444566666 889999999999998864
No 29
>1b0x_A Protein (EPHA4 receptor tyrosine kinase); protein interaction module, dimerization domain, transferase; 2.00A {Mus musculus} SCOP: a.60.1.2
Probab=99.03 E-value=2.5e-10 Score=79.60 Aligned_cols=64 Identities=19% Similarity=0.280 Sum_probs=54.9
Q ss_pred CChhHHHHHHHhcCcchHHHHhhHcCc-ChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHH
Q 032278 34 LSFQDVGLWLEEINLGGYRQIFKENGV-NGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVA 103 (144)
Q Consensus 34 WS~EDVa~WLeeiGL~qYre~Fk~NnI-dG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~ 103 (144)
-+.++|++||+.+||++|.+.|.+|+| +++.|..| +++-|.-|+. .+.||+-++++.++.++-.
T Consensus 24 ~~~~~V~~WL~~lgL~~Y~~~F~~~g~~~~~~l~~l----t~~DL~~lGI--~~~GhrkkIl~ai~~L~~~ 88 (94)
T 1b0x_A 24 SAVVSVGDWLQAIKMDRYKDNFTAAGYTTLEAVVHM----SQDDLARIGI--TAITHQNKILSSVQAMRTQ 88 (94)
T ss_dssp CSSCCHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTC----CHHHHHHHTC--CCHHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHCCcHHHHHHHHHcCCCCHHHHhhC----CHHHHHHCCC--CChhHHHHHHHHHHHHHHH
Confidence 457899999999999999999999999 78889998 4444666776 7889999999999988743
No 30
>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain, EF-SAM, STIM1, store operated calcium entry regulator, SOCE; NMR {Homo sapiens}
Probab=99.01 E-value=6.9e-11 Score=91.43 Aligned_cols=45 Identities=16% Similarity=0.341 Sum_probs=40.5
Q ss_pred cccccCCChhHHHHHHHhc-CcchHHHHhhHcCcChhhhccCcccc
Q 032278 28 PHALTLLSFQDVGLWLEEI-NLGGYRQIFKENGVNGEYLEGMSMFT 72 (144)
Q Consensus 28 ~l~~~~WS~EDVa~WLeei-GL~qYre~Fk~NnIdG~eLi~Ltk~T 72 (144)
+..+.+||+|||.+||+.. ||+||.++|++|+|+|+.|+.|+...
T Consensus 75 ~s~V~nWTvedV~~WL~~~v~LpqY~~~Fr~~~I~G~~LprLa~~~ 120 (150)
T 2k60_A 75 SSEVYNWTVDEVVQWLITYVELPQYEETFRKLQLSGHAMPRLAVTN 120 (150)
T ss_dssp HSHHHHCCHHHHHHHHHHHHCCTTHHHHHHHHCCSTTHHHHHSSCH
T ss_pred cCccccCCHHHHHHHHHHcCCcHHHHHHHHHcCCCHHHHHhhcccc
Confidence 4457899999999999666 99999999999999999999998863
No 31
>2kiv_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, tandem, signaling protein, alternative splicing, ANK repeat; NMR {Homo sapiens}
Probab=98.95 E-value=5.3e-10 Score=82.87 Aligned_cols=62 Identities=27% Similarity=0.341 Sum_probs=51.8
Q ss_pred ChhHHHHHHHhcCcchHHHHhhHcCcChhhhc---cCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHH
Q 032278 35 SFQDVGLWLEEINLGGYRQIFKENGVNGEYLE---GMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKV 102 (144)
Q Consensus 35 S~EDVa~WLeeiGL~qYre~Fk~NnIdG~eLi---~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv 102 (144)
+.++|++||+.+||++|.+.|.+|++||.++. .| +++-|..|+. .+.|++-++..+++.++.
T Consensus 13 ~~~~V~~WL~~igL~~Y~~~F~~~g~d~~~~l~~~~l----t~~DL~~lGI--~~~ghRkkil~ai~~L~~ 77 (148)
T 2kiv_A 13 SVQTVGQWLESIGLPQYENHLMANGFDNVQAMGSNVM----EDQDLLEIGI--LNSGHRQRILQAIQLLPK 77 (148)
T ss_dssp -CCBHHHHHHHHSCTTSHHHHHHTTTTBGGGGTSSCC----CHHHHHHHCC--SSTTSHHHHHHHHHHCSC
T ss_pred CcchHHHHHHHCCCHHHHHHHHHcCCCHHHHhhhccC----CHHHHHHCCC--CCHHHHHHHHHHHHHHHH
Confidence 56799999999999999999999999998776 56 3444556776 789999999999988764
No 32
>3kka_C Ephrin type-A receptor 2; ATP-binding, kinase, nucleotide-binding, transferase, tyrosine-protein kinase, signal, sterIle alpha motif; 2.40A {Homo sapiens} SCOP: a.60.1.0
Probab=98.95 E-value=4.7e-10 Score=78.30 Aligned_cols=64 Identities=25% Similarity=0.308 Sum_probs=50.7
Q ss_pred cCCChhHHHHHHHhcCcchHHHHhhHcCcC-hhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHH
Q 032278 32 TLLSFQDVGLWLEEINLGGYRQIFKENGVN-GEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIK 101 (144)
Q Consensus 32 ~~WS~EDVa~WLeeiGL~qYre~Fk~NnId-G~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~k 101 (144)
.--+.++|++||+.+||++|.+.|.+|+|+ .+.|..| +++-|..|+. .+.|++-++++.++.++
T Consensus 17 d~~~~~~V~~WL~~lgL~qY~~~F~~~g~d~le~l~~l----t~~DL~~LGI--t~~GHRkkIL~ai~~Lr 81 (86)
T 3kka_C 17 QGVPFRTVSEWLESIKMQQYTEHFMAAGYTAIEKVVQM----TNDDIKRIGV--RLPGHQKRIAYSLLGLK 81 (86)
T ss_dssp ------CHHHHHHHTTCGGGHHHHHHTTCCSHHHHHTC----CHHHHHHTTC--CCHHHHHHHHHHHHHCC
T ss_pred cccchhHHHHHHHhCCcHHHHHHHHHcCCChHHHHHhC----CHHHHHHCCC--CCHHHHHHHHHHHHHHH
Confidence 344678999999999999999999999999 5778888 4555666766 88999999999998875
No 33
>3hil_A Ephrin type-A receptor 1; ATP-binding, kinase, nucleotide-binding, transferase, tyrosine-protein kinase, signal, sterIle alpha motif; 2.00A {Homo sapiens} PDB: 3kka_A
Probab=98.93 E-value=8.4e-10 Score=76.43 Aligned_cols=60 Identities=18% Similarity=0.303 Sum_probs=51.5
Q ss_pred CChhHHHHHHHhcCcchHHHHhhHcCcC-hhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHH
Q 032278 34 LSFQDVGLWLEEINLGGYRQIFKENGVN-GEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRR 99 (144)
Q Consensus 34 WS~EDVa~WLeeiGL~qYre~Fk~NnId-G~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~ 99 (144)
-+.++|++||+.+||++|.+.|.+|+|+ ++.|..|| ++-|.-|+. .+.|++-++++.++.
T Consensus 21 ~~~~~V~~WL~~lgL~qY~~~F~~~g~~s~e~l~~lt----~~DL~~lGI--t~~GHRkkIL~aiq~ 81 (82)
T 3hil_A 21 IPYRTVSEWLESIRMKRYILHFHSAGLDTMECVLELT----AEDLTQMGI--TLPGHQKRILCSIQG 81 (82)
T ss_dssp CCCSSHHHHHHHTTCGGGHHHHHHTTCCSGGGGTTCC----HHHHHHTTC--CCHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHhCCHHHHHHHHHHcCCChHHHHhcCC----HHHHHHCCC--CCHHHHHHHHHHHHh
Confidence 4678999999999999999999999999 88898884 444566666 889999999988875
No 34
>1x40_A ARAP2; ASAP-related protein2, GTPase activity, signal transduction, SAM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=98.90 E-value=1.5e-09 Score=75.58 Aligned_cols=62 Identities=24% Similarity=0.250 Sum_probs=52.1
Q ss_pred hhHHHHHHHhcCcchHHHHhhHcCcC-hhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHH
Q 032278 36 FQDVGLWLEEINLGGYRQIFKENGVN-GEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVA 103 (144)
Q Consensus 36 ~EDVa~WLeeiGL~qYre~Fk~NnId-G~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~ 103 (144)
..+|++||+.+||++|.+.|.+|+|+ .+.|.+| +++-|..|+. .+.||+-++++.++.++--
T Consensus 15 ~~~V~~WL~~lgL~qY~~~F~~~g~~~~~~l~~l----t~~DL~~lGI--~~~GHrkkIl~ai~~L~~~ 77 (91)
T 1x40_A 15 NVDIKDFLMSINLEQYLLHFHESGFTTVKDCAAI----NDSLLQKIGI--SPTGHRRRILKQLQIILSK 77 (91)
T ss_dssp CCBHHHHHHTTTCGGGHHHHHHHTCCBSGGGGGC----CHHHHHHHTC--CCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCcHHHHhhc----CHHHHHHCCC--CCHhHHHHHHHHHHHHHhh
Confidence 46899999999999999999999997 5778888 4444666666 7899999999999988743
No 35
>2lmr_A ODIN, ankyrin repeat and SAM domain-containing protein; signaling protein; NMR {Homo sapiens}
Probab=98.86 E-value=1.1e-09 Score=78.67 Aligned_cols=64 Identities=31% Similarity=0.285 Sum_probs=53.2
Q ss_pred CCChhHHHHHHHhcCcchHHHHhhHcCcChhhhcc---CcccchHHHHHHHhHhhhccchHHHHHHHHHHHHH
Q 032278 33 LLSFQDVGLWLEEINLGGYRQIFKENGVNGEYLEG---MSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKV 102 (144)
Q Consensus 33 ~WS~EDVa~WLeeiGL~qYre~Fk~NnIdG~eLi~---Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv 102 (144)
.-.+.+|++||+.+||++|.+.|.+|+|+|.+++. | +++-|..|+. .+.|++-+++..++.++.
T Consensus 26 ~~~~~~V~eWL~~LgL~qY~~~F~~~g~d~~e~l~~~~L----t~eDL~eLGI--t~~GHRkkIL~aI~~L~~ 92 (101)
T 2lmr_A 26 RTLEQSVGEWLESIGLQQYESKLLLNGFDDVHFLGSNVM----EEQDLRDIGI--SDPQHRRKLLQAARSLPK 92 (101)
T ss_dssp CCSSCCHHHHHHHHTCGGGHHHHHHTTCCCTTSTTTSCC----CHHHHHHHTC--CCHHHHHHHHHHHHTSSS
T ss_pred CCCcccHHHHHHHCCCHHHHHHHHHcCCChHHHHhhccC----CHHHHHHCCC--CCHHHHHHHHHHHHHHHh
Confidence 34566999999999999999999999999987664 6 4555777777 889999999998887653
No 36
>2dkz_A Hypothetical protein LOC64762; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.86 E-value=1.3e-09 Score=78.40 Aligned_cols=48 Identities=31% Similarity=0.397 Sum_probs=42.3
Q ss_pred CcccccCCChhHHHHHHHhcCcchH-HHHhhHcCcChhhhccCcccchHHHHH
Q 032278 27 MPHALTLLSFQDVGLWLEEINLGGY-RQIFKENGVNGEYLEGMSMFTTEQILR 78 (144)
Q Consensus 27 ~~l~~~~WS~EDVa~WLeeiGL~qY-re~Fk~NnIdG~eLi~Ltk~T~e~il~ 78 (144)
++.+.+.||++||++||+-+||++| .+.|++|.|||.-|..| +|.||.
T Consensus 11 pP~dLs~lSv~EVs~~Lr~igL~e~vv~~F~~e~IDG~lL~~L----~ee~L~ 59 (84)
T 2dkz_A 11 PPADLSGLSIEEVSKSLRFIGLSEDVISFFVTEKIDGNLLVQL----TEEILS 59 (84)
T ss_dssp CCSCCSSCCHHHHHHHGGGTCCCHHHHHHHHTTTCCHHHHHHC----CHHHHH
T ss_pred CchhhhhcCHHHHHHHHHHcCCcHHHHHHHHHHccchHHHHhC----CHHHHH
Confidence 3456699999999999999999985 69999999999999999 666664
No 37
>3sei_A Caskin-1; SAM domain, protein-protein interaction, signaling protein; 2.40A {Homo sapiens} PDB: 3sen_A
Probab=98.83 E-value=1.6e-09 Score=81.02 Aligned_cols=63 Identities=22% Similarity=0.281 Sum_probs=53.5
Q ss_pred ChhHHHHHHHhcCcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHH
Q 032278 35 SFQDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVA 103 (144)
Q Consensus 35 S~EDVa~WLeeiGL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~ 103 (144)
+.++|++||+.+||++|.+.|.+|++||+.|..|| ++=|..|+. +..||+-++...++.++..
T Consensus 9 ~~~~V~~WL~~lgL~~Y~~~F~~~g~d~~~l~~lt----~~DL~~lGI--t~~gHrkkil~ai~~L~~~ 71 (149)
T 3sei_A 9 SSEAVSQWLTAFQLQLYAPNFISAGYDLPTISRMT----PEDLTAIGV--TKPGHRKKIAAEISGLSIP 71 (149)
T ss_dssp HHHHHHHHHHTTTCGGGHHHHHHTTCCHHHHTTCC----HHHHHHTTC--CSHHHHHHHHHHHHTCCCC
T ss_pred cHHHHHHHHHHCCcHHHHHHHHHcCCCHHHHccCC----HHHHHHcCC--CCHHHHHHHHHHHHHHHhc
Confidence 46899999999999999999999999999998884 333455665 7789999999999887654
No 38
>3k1r_B Usher syndrome type-1G protein; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens}
Probab=98.81 E-value=5.1e-09 Score=71.02 Aligned_cols=63 Identities=17% Similarity=0.229 Sum_probs=53.2
Q ss_pred hHHHHHHHhcCcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHHHhh
Q 032278 37 QDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVACLK 106 (144)
Q Consensus 37 EDVa~WLeeiGL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~~~~ 106 (144)
..|++||+.+||++|.+.|.+|+||+..|..|| ++-|.-|+. ..|++.+++.-++..|-....
T Consensus 3 ~~v~~wL~~lgL~~Y~~~F~~~~id~e~l~~lt----~~DL~~lGI---~~G~RkkIl~ai~~~~~~~~~ 65 (74)
T 3k1r_B 3 SPLETFLASLHMEDFAALLRQEKIDLEALMLCS----DLDLRSISV---PLGPREKILGAVRRRRQAMER 65 (74)
T ss_dssp CHHHHHHHTTTCGGGHHHHHHTTCCHHHHTTCC----HHHHHHTTC---CHHHHHHHHHHHHHHHHHHHS
T ss_pred chHHHHHHHCCCHHHHHHHHHcCcCHHHHhHCC----HHHHHHcCC---CcchHHHHHHHHHHHHHHhcC
Confidence 469999999999999999999999999999994 444555554 499999999999999876544
No 39
>3sei_A Caskin-1; SAM domain, protein-protein interaction, signaling protein; 2.40A {Homo sapiens} PDB: 3sen_A
Probab=98.77 E-value=9.7e-09 Score=76.82 Aligned_cols=64 Identities=20% Similarity=0.359 Sum_probs=52.3
Q ss_pred cCCChhHHHHHHHhcCcchHHHHhhHcCcC-hhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHH
Q 032278 32 TLLSFQDVGLWLEEINLGGYRQIFKENGVN-GEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIK 101 (144)
Q Consensus 32 ~~WS~EDVa~WLeeiGL~qYre~Fk~NnId-G~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~k 101 (144)
..-.+.+|++||+.+||++|.+.|.+|+|+ ++.|.+|| ++-|..|+. .+.||+-+++.-++.++
T Consensus 75 ~~~~p~~v~~WL~~igL~qY~~~F~~~g~d~~~~l~~lt----~~dL~~lGI--~~~gHr~kIl~ai~~l~ 139 (149)
T 3sei_A 75 PEHKPANLAVWLSMIGLAQYYKVLVDNGYENIDFITDIT----WEDLQEIGI--TKLGHQKKLMLAVRKLA 139 (149)
T ss_dssp CSSCCSCHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTCC----HHHHHHHTC--CCHHHHHHHHHHHHHHH
T ss_pred CCCCcccHHHHHHHcCchhhHHHHHHCCCchHHHHhhCC----HHHHHHCCC--CCHHHHHHHHHHHHHHH
Confidence 344567999999999999999999999999 78888884 444566665 78999998887777665
No 40
>1v38_A SAM-domain protein samsn-1; structural genomics, hypothetical protein, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: a.60.1.2
Probab=98.75 E-value=1.2e-08 Score=69.33 Aligned_cols=64 Identities=20% Similarity=0.154 Sum_probs=52.1
Q ss_pred cCCChhHHHHHHHhcCcchHHHHhhHcCcChhh-hccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHH
Q 032278 32 TLLSFQDVGLWLEEINLGGYRQIFKENGVNGEY-LEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIK 101 (144)
Q Consensus 32 ~~WS~EDVa~WLeeiGL~qYre~Fk~NnIdG~e-Li~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~k 101 (144)
....+++|++||+.+||++|.+.|.+|++++-+ +..| +++-|..|+. .+-||+-+++..++.++
T Consensus 8 ~~~~~~~V~eWL~~i~L~~Y~~~F~~~gy~~~~~~~~l----t~~DL~~lGI--~~~ghrkkil~ai~~L~ 72 (78)
T 1v38_A 8 RRENHQTIQEFLERIHLQEYTSTLLLNGYETLDDLKDI----KESHLIELNI--ADPEDRARLLSAAESLL 72 (78)
T ss_dssp CCSSCCBHHHHHHTTTCGGGHHHHHHHTCCBHHHHTTC----CHHHHHHTTT--CCHHHHHHHHHHHHHHH
T ss_pred CCCCcCcHHHHHHHCCCHHHHHHHHHcCCCCHHHHhhc----CHHHHHHcCC--CCHHHHHHHHHHHHHHH
Confidence 445788999999999999999999999998754 4444 4555666776 78899999999888765
No 41
>3tad_C Liprin-beta-1; protein binding; 2.90A {Mus musculus}
Probab=98.68 E-value=3.7e-08 Score=81.35 Aligned_cols=69 Identities=22% Similarity=0.400 Sum_probs=56.8
Q ss_pred ccccCCChhHHHHHHHhcCcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHH
Q 032278 29 HALTLLSFQDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVA 103 (144)
Q Consensus 29 l~~~~WS~EDVa~WLeeiGL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~ 103 (144)
..+..+....|++||+.|||+||++.|.+|.|||+-|.+||... |+.|+. .+-||+-++...++.+|-.
T Consensus 85 ~~~~~~d~~wv~~WL~~IGL~QY~~~F~~~~iDg~~L~~LT~~D----L~~LGI--t~~~HR~kil~aI~~L~~~ 153 (265)
T 3tad_C 85 TNYGKLDFNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYMTVDD----LLSLKV--VSVLHHLSIKRAIQVLRIN 153 (265)
T ss_dssp CSGGGCCHHHHHHHHHHHTCGGGHHHHHHHTCCHHHHHTCBHHH----HHHTTC--CBHHHHHHHHHHHHHHHHT
T ss_pred ccccccChHHHHHHHHHcCcHHHHHHHHHcCCCHHHhcccCHHH----HHHcCC--CcHHhHHHHHHHHHHHhhc
Confidence 34678888999999999999999999999999999999995443 345555 7789999998777777654
No 42
>3tac_B Liprin-alpha-2; transferase-protein binding complex; 2.20A {Homo sapiens} PDB: 3tad_A
Probab=98.62 E-value=3e-08 Score=84.98 Aligned_cols=66 Identities=20% Similarity=0.204 Sum_probs=52.9
Q ss_pred cccccCCChhHHHHHHHh-cCcch-HHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHH---HHHHH
Q 032278 28 PHALTLLSFQDVGLWLEE-INLGG-YRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITL---CKELR 98 (144)
Q Consensus 28 ~l~~~~WS~EDVa~WLee-iGL~q-Yre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl---~~el~ 98 (144)
...|.+|+.++|++||++ +||++ |+..|++|.++|..|.+|| ++.|-+-|+. .+=+|+-+| ++|++
T Consensus 33 ~~Pfs~W~~~~V~aWLe~~iGmp~~Yv~~~r~nvkSG~~Ll~LS---d~dLekeLGI--~nPLHRKKL~LAIqel~ 103 (334)
T 3tac_B 33 GLPFAQWDGPTVVAWLELWLGMPAWYVAACRANVKSGAIMSALS---DTEIQREIGI--SNPLHRLKLRLAIQEMV 103 (334)
T ss_dssp TCCGGGCCHHHHHHHHHHTTCCCHHHHHHHHHHCCSHHHHHTCC---HHHHHHTTCC--CCHHHHHHHHHHHHHHH
T ss_pred CCChhhCCcHHHHHHHHHHhcChHHHHHHHHHHccchHHHHhCC---HHHHHHHhCC--CCHHHHHHHHHHHHHHH
Confidence 467999999999999999 89998 9999999999999998874 5555556666 445666666 45554
No 43
>1uqv_A STE50 protein; SAM, sterIle alpha motif, helical, protein-protein interaction domain, growth arrest, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.60.1.2 PDB: 1z1v_A
Probab=98.50 E-value=1.4e-07 Score=67.94 Aligned_cols=68 Identities=16% Similarity=0.345 Sum_probs=56.1
Q ss_pred cccccCCChhHHHHHH-HhcCcch---HHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHH
Q 032278 28 PHALTLLSFQDVGLWL-EEINLGG---YRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIK 101 (144)
Q Consensus 28 ~l~~~~WS~EDVa~WL-eeiGL~q---Yre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~k 101 (144)
...+..||+++|+.|. .+.||++ ..+-|++|+|+|.-|+.|+.+...+ + |+-.+|-++.|-..|.+++
T Consensus 6 ~~~v~~Wt~~~V~~W~~~~lg~~d~d~~~~~f~~ndItG~vL~eL~leDlKE----L--~i~s~~~r~~lk~~In~Lr 77 (85)
T 1uqv_A 6 NEDFSQWSVDDVITWCISTLEVEETDPLCQRLRENDIVGDLLPELCLQDCQD----L--CDGDLNKAIKFKILINKMR 77 (85)
T ss_dssp CCCTTTCCHHHHHHHHHHHHSSCTTSTHHHHHHHSCCCGGGHHHHHHHHHHH----T--SSSCHHHHHHHHHHHHHHH
T ss_pred ccccccCCHHHHHHHHHHHhCCCCccHHHHHHHHcCCchhhHHHcCHHHHHH----h--CchHHHHHHHHHHHHHHHH
Confidence 3468999999999999 7889998 6889999999999999995433332 2 4588888999988888887
No 44
>2kiv_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, tandem, signaling protein, alternative splicing, ANK repeat; NMR {Homo sapiens}
Probab=98.46 E-value=1.3e-07 Score=70.08 Aligned_cols=62 Identities=21% Similarity=0.365 Sum_probs=49.0
Q ss_pred cCCChhHHHHHHHhcCcchHHHHhhHcCcCh-hhhccCcccchHHHHHHHhHhhhccchHHHHHHHHH
Q 032278 32 TLLSFQDVGLWLEEINLGGYRQIFKENGVNG-EYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELR 98 (144)
Q Consensus 32 ~~WS~EDVa~WLeeiGL~qYre~Fk~NnIdG-~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~ 98 (144)
...++++|++||+.+||++|.+.|.+|+++| +.|..| |.++++..++. .+-||+-+++.-++
T Consensus 84 d~~~~~~v~~WL~~i~L~qY~~~F~~~g~~~~~~l~~l---t~~dLl~~lGI--~~~gHrkrIl~ai~ 146 (148)
T 2kiv_A 84 DGAHPTSVAEWLDSIELGDYTKAFLINGYTSMDLLKKI---AEVELINVLKI--NLIGHRKRILASLG 146 (148)
T ss_dssp CCCCCSSHHHHHHTTTCCTHHHHHHHHTCCSHHHHTSC---CHHHHHHHTCC--CCHHHHHHHHHHHT
T ss_pred CCCCcchHHHHHHHCCcHHHHHHHHHcCCChHHHHHhC---CHHHHHHhCCC--CChhHHHHHHHHHh
Confidence 3467789999999999999999999999998 667777 34555566666 67888887765443
No 45
>2eap_A Lymphocyte cytosolic protein 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.30 E-value=2.6e-07 Score=67.26 Aligned_cols=43 Identities=5% Similarity=0.091 Sum_probs=37.5
Q ss_pred CCcccccCCChhHHHHHHHhcCcchHHHHhh-HcCcChhhhccCc
Q 032278 26 DMPHALTLLSFQDVGLWLEEINLGGYRQIFK-ENGVNGEYLEGMS 69 (144)
Q Consensus 26 ~~~l~~~~WS~EDVa~WLeeiGL~qYre~Fk-~NnIdG~eLi~Lt 69 (144)
+....+..||+++|++||++.||.+ .+.|- .++|||..|++||
T Consensus 14 ps~seV~~Wsp~~VadWLkk~g~~~-cd~lv~Kh~IDG~~lL~Lt 57 (90)
T 2eap_A 14 PFRSEVLGWDPDSLADYFKKLNYKD-CEKAVKKYHIDGARFLNLT 57 (90)
T ss_dssp CCHHHHTTCCTTTHHHHHHHTTCHH-HHHHHHHTTCCHHHHHTCC
T ss_pred ccCccccccCHHHHHHHHHHcCCch-HHHHHHHhccCchhhhccc
Confidence 4456789999999999999999999 66664 8889999999995
No 46
>3tac_B Liprin-alpha-2; transferase-protein binding complex; 2.20A {Homo sapiens} PDB: 3tad_A
Probab=97.91 E-value=8.6e-06 Score=69.89 Aligned_cols=45 Identities=24% Similarity=0.387 Sum_probs=37.7
Q ss_pred cccCCChhHHH-HHHHhcCcchHHHHhhHcCcChhhhccCcccchH
Q 032278 30 ALTLLSFQDVG-LWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTE 74 (144)
Q Consensus 30 ~~~~WS~EDVa-~WLeeiGL~qYre~Fk~NnIdG~eLi~Ltk~T~e 74 (144)
.+.+...+=|+ .||+.|||+||++.|.+|.|||+-|..||+...+
T Consensus 156 ~~g~ldh~WV~~~WL~dIGLpQY~~~F~~~~VDgR~L~~Lt~~DL~ 201 (334)
T 3tac_B 156 AYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLR 201 (334)
T ss_dssp ---CCCHHHHHHTHHHHTTCGGGHHHHHHTTCCHHHHTTCCHHHHH
T ss_pred hcccCccCcchhhhccccChHHhHHHHHhcCcchhhhhhccHHHHH
Confidence 45667778899 7999999999999999999999999999766653
No 47
>2qar_B Telsam domain; polymer, crystallization modules, sterIle alpha motif, hydro regulator; 2.40A {Escherichia coli}
Probab=97.91 E-value=6.6e-06 Score=58.37 Aligned_cols=67 Identities=22% Similarity=0.182 Sum_probs=49.6
Q ss_pred cccccCCChhHHHHHHHhcCcchHH---HHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHHH
Q 032278 28 PHALTLLSFQDVGLWLEEINLGGYR---QIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVAC 104 (144)
Q Consensus 28 ~l~~~~WS~EDVa~WLeeiGL~qYr---e~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~~ 104 (144)
+.+...||.+||..||...+ .+|. --|...+|||+.|..||++. |..|.- ..||. |..-|+.+|--+
T Consensus 9 ~~DP~~WS~~~V~~WL~w~~-~ef~L~~i~~~~f~mdGk~Lc~Lt~ed------F~~~~p-~~Gdi--L~~hL~~Lk~~~ 78 (93)
T 2qar_B 9 RLQPIYWSRDDVAQWLKWAE-NEFSLSPIDSNTFEMNGKALLLLTKED------FRYRSP-HSGDV--LYELLQHILKQR 78 (93)
T ss_dssp CSCGGGCCHHHHHHHHHHHH-HHTTCCCCCGGGGCSCHHHHTTCCHHH------HHHHCT-TTHHH--HHHHHHHHHHHH
T ss_pred CCChhhCCHHHHHHHHHHHH-HhcCCCCcchhcCCCCHHHHHcCCHHH------HhhhCC-cchHH--HHHHHHHHHHhc
Confidence 56788999999999998777 7776 22556689999999997643 333332 25886 788888887544
No 48
>1sv0_C Modulator of the activity of ETS CG15085-PA; alpha-helix, 3(10) helix, transcription; 2.07A {Drosophila melanogaster} SCOP: a.60.1.1
Probab=97.70 E-value=2.4e-05 Score=53.89 Aligned_cols=68 Identities=24% Similarity=0.287 Sum_probs=47.2
Q ss_pred CCcccccCCChhHHHHHHHhcCcchHH-H----HhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHH-H
Q 032278 26 DMPHALTLLSFQDVGLWLEEINLGGYR-Q----IFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELR-R 99 (144)
Q Consensus 26 ~~~l~~~~WS~EDVa~WLeeiGL~qYr-e----~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~-~ 99 (144)
..+.+...||++||..||.-. ..+|. + -|...++||++|-.||++. |.+|+- .-||. |-..|+ +
T Consensus 6 ~i~~dP~~Ws~~~V~~WL~w~-~~e~~l~l~~~~~~~f~m~G~~Lc~ls~ed------F~~~~p-~~Gdi--L~~hL~~~ 75 (82)
T 1sv0_C 6 GLPLDPRDWTRADVWKWLINM-AVSEGLEVTAELPQKFPMNGKALCLMSLDM------YLCRVP-VGGKM--LYRDFRVR 75 (82)
T ss_dssp SSBSSGGGCCHHHHHHHHHHH-HHHHTCCCCTHHHHTCCSCHHHHHHCCHHH------HHHHCT-TTHHH--HHHHHHHH
T ss_pred cCCCChhhCCHHHHHHHHHHH-HHHhCCCCCCCccccCCCCHHHHHhCCHHH------HHhhCC-CchHH--HHHHHHHH
Confidence 446778899999999999644 44431 1 1445579999999997653 666655 67887 667777 4
Q ss_pred HHHH
Q 032278 100 IKVA 103 (144)
Q Consensus 100 ~kv~ 103 (144)
|+-|
T Consensus 76 l~~~ 79 (82)
T 1sv0_C 76 LARA 79 (82)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 49
>2d3d_A VTS1 protein; RNA binding, SAM domain, SRE hairpin binding, RNA binding protein; 1.60A {Saccharomyces cerevisiae} PDB: 2f8k_A 2fe9_A
Probab=97.54 E-value=0.00011 Score=52.55 Aligned_cols=63 Identities=14% Similarity=0.167 Sum_probs=51.0
Q ss_pred hHHHHHHHhcCcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHHHhhC
Q 032278 37 QDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVACLKG 107 (144)
Q Consensus 37 EDVa~WLeeiGL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~~~~~ 107 (144)
.||.+||+.+||..|.+.|..+ +=.++.+| ||+=|+-++. .-.|++=++++-++.+|-.-.+|
T Consensus 19 ~~V~~WL~sLrLhKY~~~F~~~--~~~~l~~L----tdedL~~~GV--ta~GaRrKil~aI~~lr~~~~~~ 81 (88)
T 2d3d_A 19 KNIPMWLKSLRLHKYSDALSGT--PWIELIYL----DDETLEKKGV--LALGARRKLLKAFGIVIDYKERD 81 (88)
T ss_dssp TCHHHHHHHTTCGGGHHHHTTS--CHHHHTTC----CHHHHHHTTC--CCHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHcccchhHHHHhcC--CHHHHHHc----CHHHHHHcCC--ccHhHHHHHHHHHHHHHHHHhcC
Confidence 5899999999999999999874 55678877 5555666773 66999999999999888765554
No 50
>1ji7_A ETS-related protein TEL1; helical polymer, transcription; 1.45A {Homo sapiens} SCOP: a.60.1.1 PDB: 2qar_A 2qb0_A 1lky_A 1lky_B 2qb1_A
Probab=97.54 E-value=5e-05 Score=53.55 Aligned_cols=66 Identities=21% Similarity=0.151 Sum_probs=46.5
Q ss_pred cccccCCChhHHHHHHHhcCcchHH---HHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHH
Q 032278 28 PHALTLLSFQDVGLWLEEINLGGYR---QIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVA 103 (144)
Q Consensus 28 ~l~~~~WS~EDVa~WLeeiGL~qYr---e~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~ 103 (144)
+.+...||+|||..||... ..+|. --|...+|||++|..||++. |..|.- ..||.+ -..|+.+|-+
T Consensus 9 ~~DP~~WS~~~V~~WL~w~-~~ef~L~~~~~~~f~mdGk~Lc~Ls~ed------F~~~~p-~~GdiL--~~hL~~l~~~ 77 (89)
T 1ji7_A 9 RLQPIYWSRDDVAQWLKWA-ENEFSLRPIDSNTFEMNGKALLLLTKED------FRYRSP-HSGDEL--YELLQHILKQ 77 (89)
T ss_dssp CSCGGGCCHHHHHHHHHHH-HHHTTCSCCCTTTTCSCHHHHTTCCHHH------HHHHCT-TTHHHH--HHHHHHHHHC
T ss_pred CCChhhCCHHHHHHHHHHH-HHhcCCCCCchhcCCCCHHHHHcCCHHH------HHhHcC-CchHHH--HHHHHHHHhC
Confidence 5678899999999999766 55565 12455679999999997643 444433 348864 4677776653
No 51
>2y9t_A Tumor protein 63; apoptosis, sterIle alpha motif, 5-helix bundle; NMR {Homo sapiens}
Probab=97.42 E-value=0.00027 Score=49.50 Aligned_cols=63 Identities=6% Similarity=0.078 Sum_probs=51.0
Q ss_pred HHHHHHHhcCcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHHHhh
Q 032278 38 DVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVACLK 106 (144)
Q Consensus 38 DVa~WLeeiGL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~~~~ 106 (144)
-|++||+.||+++|.+.|.++++. .+.++...|.|+ +.+..+..||.=+...-++.++.....
T Consensus 8 SV~~WLd~i~m~~Y~d~F~~~G~~--sl~~V~~lt~eD----L~~mGIt~gHqkkIl~siq~lr~~~~~ 70 (82)
T 2y9t_A 8 SIVSFLARLGCSSCLDYFTTQGLT--TIYQIEHYSMDD----LASLKIPEQFRHAIWKGILDHRQLHEF 70 (82)
T ss_dssp BHHHHHHHHTCGGGHHHHHTTTCC--BSGGGTTCCHHH----HHHTTCCHHHHHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHcCchHHHHHHHHcCCC--cHHHHHhcCHHH----HHhcCCChhhHHHHHhhHHHHHHHhcc
Confidence 699999999999999999999986 466677777665 455555569998999999888877655
No 52
>2b6g_A VTS1P; alpha-helix, pentaloop, hairpin, RNA binding protein; NMR {Saccharomyces cerevisiae}
Probab=97.41 E-value=0.00021 Score=53.61 Aligned_cols=64 Identities=16% Similarity=0.211 Sum_probs=50.7
Q ss_pred hhHHHHHHHhcCcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHHHhhC
Q 032278 36 FQDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVACLKG 107 (144)
Q Consensus 36 ~EDVa~WLeeiGL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~~~~~ 107 (144)
.+||.+||+.+||+.|.+.|. +++-.+|..| +|+-|+-++. .-.|++=++++-++.++-.--+|
T Consensus 49 ~~dV~~WL~sLrL~KY~~~F~--~~~~d~l~~L----TeeDL~~lGV--ta~GaRrKlL~AI~~Lr~~k~~~ 112 (119)
T 2b6g_A 49 LKNIPMWLKSLRLHKYSDALS--GTPWIELIYL----DDETLEKKGV--LALGARRKLLKAFGIVIDYKERD 112 (119)
T ss_dssp HHCHHHHHHHHTCHHHHHHHT--TSCHHHHTTC----CHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHCCChhHHHHHc--cCCHHHHHhc----CHHHHHHCCC--CccccHHHHHHHHHHHHhhhccc
Confidence 479999999999999999995 4788899998 6777777774 56899988877777766554443
No 53
>2y9u_A Tumor protein 63; apoptosis, sterIle alpha motif, 5-helix bundle, mutations, A syndrome; 1.60A {Homo sapiens} PDB: 1rg6_A
Probab=97.41 E-value=0.00042 Score=47.02 Aligned_cols=61 Identities=7% Similarity=0.114 Sum_probs=46.8
Q ss_pred HHHHHHHhcCcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHHH
Q 032278 38 DVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVAC 104 (144)
Q Consensus 38 DVa~WLeeiGL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~~ 104 (144)
-|++||+.||+++|.+.|.+++.. .+.++...|.|. +.+.-+..||.=+...-++.++...
T Consensus 6 sv~~WLd~i~m~~Y~d~F~~~g~~--s~~~v~~lt~eD----L~~~GIt~ghqkkIl~siq~lr~~~ 66 (69)
T 2y9u_A 6 SIVSFLARLGCSSCLDYFTTQGLT--TIYQIEHYSMDD----LASLKIPEQFRHAIWKGILDHRQLH 66 (69)
T ss_dssp BHHHHHHTTTCGGGHHHHHTTTCC--BHHHHTTCCHHH----HHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHcCChHHHHHHHHcCCC--cHHHHHHcCHHH----HHhcCCChhhHHHHHHhHHHHHhcc
Confidence 489999999999999999999986 455566666654 5566555688888888887776543
No 54
>2es6_A VTS1P; SAM domain, protein structure, gene regulation; NMR {Saccharomyces cerevisiae} PDB: 2ese_A
Probab=97.41 E-value=0.00017 Score=53.04 Aligned_cols=63 Identities=14% Similarity=0.167 Sum_probs=51.4
Q ss_pred hHHHHHHHhcCcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHHHHhhC
Q 032278 37 QDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVACLKG 107 (144)
Q Consensus 37 EDVa~WLeeiGL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv~~~~~ 107 (144)
.||.+||+.+||..|.+.|..+ +=+++..| ||+=|+-++. .-.|.+=++++-++.+|-.-.+|
T Consensus 32 ~dV~~WLksLrLhKY~~~F~~~--~~~~l~~L----TdedL~~~GV--ta~GARrKiL~aI~~Lr~~k~~~ 94 (101)
T 2es6_A 32 KNIPMWLKSLRLHKYSDALSGT--PWIELIYL----DDETLEKKGV--LALGARRKLLKAFGIVIDYKERD 94 (101)
T ss_dssp TCHHHHHHTTTCCCTHHHHTTS--CHHHHTTC----CHHHHHHHTC--CSHHHHHHHHHHHHHHHHHHTTT
T ss_pred cCHHHHHHHccCcchHHHHccC--CHHHHHhc----CHHHHHHcCC--ccHhHHHHHHHHHHHHHHHHHcC
Confidence 5999999999999999999885 55678887 5666666774 66999999999999888764444
No 55
>1oxj_A RNA-binding protein smaug; SAM domain, PHAT domain; 1.80A {Drosophila melanogaster} SCOP: a.60.1.2 a.118.1.13
Probab=96.79 E-value=0.00082 Score=53.37 Aligned_cols=56 Identities=29% Similarity=0.465 Sum_probs=40.7
Q ss_pred hHHHHHHHhcCcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHH
Q 032278 37 QDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIK 101 (144)
Q Consensus 37 EDVa~WLeeiGL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~k 101 (144)
.||.+||+.+||..|.+.|.+. +=+++..| ||+=|+-++. .+ |.+=++++-++++|
T Consensus 8 ~dV~~WLksLrLhKY~~~F~~~--~~e~~~~L----TdedL~~~GV--T~-GARrKIL~aIq~Lr 63 (173)
T 1oxj_A 8 SGIGLWLKSLRLHKYIELFKNM--TYEEMLLI----TEDFLQSVGV--TK-GASHKLALCIDKLK 63 (173)
T ss_dssp TTHHHHHHHTTCGGGGGGGTTC--CHHHHTTC----CHHHHHHTTC--CH-HHHHHHHHHHHHHH
T ss_pred cCHHHHHHHcccchhHHHHccC--CHHHHHhc----CHHHHHHCCC--ch-HHHHHHHHHHHHHH
Confidence 4999999999999999999875 44477777 4444444544 33 77777776666655
No 56
>1wwu_A Hypothetical protein FLJ21935; structural genomics, protein regulation, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens}
Probab=96.77 E-value=0.00075 Score=49.53 Aligned_cols=43 Identities=14% Similarity=0.128 Sum_probs=38.9
Q ss_pred cCCChhHHHHHHHhcCcchH-HHHhhHcCcChhhhccCcccchHHH
Q 032278 32 TLLSFQDVGLWLEEINLGGY-RQIFKENGVNGEYLEGMSMFTTEQI 76 (144)
Q Consensus 32 ~~WS~EDVa~WLeeiGL~qY-re~Fk~NnIdG~eLi~Ltk~T~e~i 76 (144)
.+=|++||.+||...||..| .+.|. +.+|..|.+||+...++|
T Consensus 22 ~~Ssp~EV~~WL~~kgFS~~tv~~Lg--~ltGaqLf~Ltk~eL~~v 65 (99)
T 1wwu_A 22 YESGPDEVRAWLEAKAFSPRIVENLG--ILTGPQLFSLNKEELKKV 65 (99)
T ss_dssp TTCCHHHHHHHHHHHTCCTTHHHHTT--SSCHHHHHTCCHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHHHHHHHc--CCCHHHHHcCCHHHHHHH
Confidence 34589999999999999999 99995 799999999999988887
No 57
>2e8m_A Epidermal growth factor receptor kinase substrate 8; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.76 E-value=0.00066 Score=49.86 Aligned_cols=43 Identities=16% Similarity=0.162 Sum_probs=38.9
Q ss_pred cCCChhHHHHHHHhcCcchH-HHHhhHcCcChhhhccCcccchHHH
Q 032278 32 TLLSFQDVGLWLEEINLGGY-RQIFKENGVNGEYLEGMSMFTTEQI 76 (144)
Q Consensus 32 ~~WS~EDVa~WLeeiGL~qY-re~Fk~NnIdG~eLi~Ltk~T~e~i 76 (144)
..=|++||.+||...||..| .+.|. +.+|..|.+|++...++|
T Consensus 32 ~~Ssp~EV~~WL~~kgFS~~tv~~Lg--~ltGaqLl~Ltk~eL~~v 75 (99)
T 2e8m_A 32 YDSTPEDVKTWLQSKGFNPVTVNSLG--VLNGAQLFSLNKDELRTV 75 (99)
T ss_dssp TTCCTTHHHHHHHHHTCCHHHHHHTS--SSCHHHHHHCCHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHHHHHHHc--CCCHHHHHcCCHHHHHHH
Confidence 35689999999999999998 99995 799999999999888876
No 58
>1x66_A Friend leukemia integration 1 transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.20 E-value=0.0033 Score=44.88 Aligned_cols=65 Identities=25% Similarity=0.329 Sum_probs=44.2
Q ss_pred CcccccCCChhHHHHHHH----hcCcchHHHHhhH-cCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHH
Q 032278 27 MPHALTLLSFQDVGLWLE----EINLGGYRQIFKE-NGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIK 101 (144)
Q Consensus 27 ~~l~~~~WS~EDVa~WLe----eiGL~qYre~Fk~-NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~k 101 (144)
.+.+-..||.++|..||. +.+|.... |.. +++||++|-.||++. |.+++--.-||. |-.-|+.+|
T Consensus 20 ip~DP~~Ws~~~V~~WL~W~~~ef~L~~v~--~~~F~~m~G~~LC~ls~ed------F~~~~~~~~Gdi--L~~hL~~Lk 89 (98)
T 1x66_A 20 VPADPTLWTQEHVRQWLEWAIKEYSLMEID--TSFFQNMDGKELCKMNKED------FLRATTLYNTEV--LLSHLSYLR 89 (98)
T ss_dssp CCSSGGGCCTTHHHHHHHHHHHHTTCCSCC--GGGGTTCCHHHHHHCCHHH------HHTTSCHHHHHH--HHHHHHHHH
T ss_pred CCCChhhcCHHHHHHHHHHHHHhcCCCCCC--hhhCCCCCHHHHHcCCHHH------HHHHcCCCchHH--HHHHHHHHH
Confidence 366778999999999995 45665431 333 379999999997653 666543334776 555566555
No 59
>1sxd_A GA repeat binding protein, alpha; alpha helical, transcription, signaling protein; NMR {Mus musculus} SCOP: a.60.1.1
Probab=96.13 E-value=0.0054 Score=43.32 Aligned_cols=64 Identities=19% Similarity=0.349 Sum_probs=44.0
Q ss_pred CCcccccCCChhHHHHHHH----hcCcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHH
Q 032278 26 DMPHALTLLSFQDVGLWLE----EINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIK 101 (144)
Q Consensus 26 ~~~l~~~~WS~EDVa~WLe----eiGL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~k 101 (144)
..+.+-..||.++|..||. +.+|+... |..=++||++|-.||++. |.+|+- . ||. |-.-|+.+|
T Consensus 18 ~ip~DP~~Ws~~~V~~WL~W~~~ef~L~~v~--~~~f~m~G~~LC~ls~ed------F~~~~p-~-Gdi--L~~hL~~L~ 85 (91)
T 1sxd_A 18 GIPYDPIHWSTDQVLHWVVWVMKEFSMTDID--LTTLNISGRELCSLNQED------FFQRVP-R-GEI--LWSHLELLR 85 (91)
T ss_dssp TCCSSGGGCCHHHHHHHHHHHHHHTTCCCSC--SGGGCSCHHHHHHSCHHH------HHHHCT-T-CHH--HHHHHHHHH
T ss_pred CCCCChhhCCHHHHHHHHHHHHHccCCCCCC--hhhCCCCHHHHHcCCHHH------HHHHCC-C-chH--HHHHHHHHH
Confidence 4567889999999999985 45666441 333489999999997653 666664 4 984 344444443
No 60
>1sv0_A ETS DNA-binding protein pokkuri; alpha-helix, 3(10) helix, transcription; 2.07A {Drosophila melanogaster} SCOP: a.60.1.1 PDB: 1sv4_A
Probab=96.00 E-value=0.0056 Score=42.80 Aligned_cols=66 Identities=27% Similarity=0.377 Sum_probs=44.6
Q ss_pred CcccccCCChhHHHHHHH----hcCcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHH
Q 032278 27 MPHALTLLSFQDVGLWLE----EINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKV 102 (144)
Q Consensus 27 ~~l~~~~WS~EDVa~WLe----eiGL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv 102 (144)
.+.+-..||.++|..||. +.+|+.-. |..=++||++|-.||++. |.+|+- .-||.+ -.-|+.+|-
T Consensus 6 ip~DP~~Ws~~~V~~WL~W~~~ef~L~~i~--~~~F~m~G~~LC~ls~ed------F~~~~p-~~GdiL--~~hL~~Lk~ 74 (85)
T 1sv0_A 6 LPSDPRLWSREDVLVFLRFCVREFDLPKLD--FDLFQMNGKRLCLLTRAD------FGHRCP-GAGDVL--HNVLQMLII 74 (85)
T ss_dssp SCSSGGGCCHHHHHHHHHHHHHHTTCCCCC--GGGGCSCHHHHTTCCHHH------HHHHST-TTHHHH--HHHHHHHHH
T ss_pred CCCChhhCCHHHHHHHHHHHHHccCCCCCC--hhhCCCCHHHHHcCCHHH------HHHHcC-CchHHH--HHHHHHHHH
Confidence 366778999999999996 45665431 223369999999997753 666754 468753 444555554
Q ss_pred H
Q 032278 103 A 103 (144)
Q Consensus 103 ~ 103 (144)
+
T Consensus 75 ~ 75 (85)
T 1sv0_A 75 E 75 (85)
T ss_dssp H
T ss_pred h
Confidence 3
No 61
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=95.36 E-value=0.0053 Score=47.26 Aligned_cols=21 Identities=10% Similarity=0.082 Sum_probs=18.3
Q ss_pred hhhheecccceeEeeecCCcc
Q 032278 9 TFLVYGRKQKSVNIWFNDMPH 29 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~~l 29 (144)
.+|||||.|+||+||+++...
T Consensus 325 ~~laS~S~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 325 TYVASVSAANTIHIIKLPLNY 345 (365)
T ss_dssp CEEEEEETTSEEEEEECCTTT
T ss_pred CEEEEEeCCCeEEEEEcCCCC
Confidence 479999999999999997544
No 62
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.00 E-value=0.0069 Score=43.26 Aligned_cols=19 Identities=11% Similarity=0.375 Sum_probs=16.9
Q ss_pred hhhhheecccceeEeeecC
Q 032278 8 LTFLVYGRKQKSVNIWFND 26 (144)
Q Consensus 8 ~~~LATGSmDKsV~IWql~ 26 (144)
-.+|||||.|++|+||++.
T Consensus 51 ~~~l~S~s~D~~i~vWd~~ 69 (340)
T 4aow_A 51 PDMILSASRDKTIIMWKLT 69 (340)
T ss_dssp TTEEEEEETTSCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEECC
Confidence 3589999999999999984
No 63
>2dkx_A SAM pointed domain-containing ETS transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.72 E-value=0.016 Score=41.11 Aligned_cols=66 Identities=23% Similarity=0.168 Sum_probs=45.4
Q ss_pred CCcccccCCChhHHHHHHH----hcCcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHH
Q 032278 26 DMPHALTLLSFQDVGLWLE----EINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIK 101 (144)
Q Consensus 26 ~~~l~~~~WS~EDVa~WLe----eiGL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~k 101 (144)
..+.+-..||.++|..||. +.+|+... +..-++||++|-.||++. |.+|.- .-||.+ -.-|+.+|
T Consensus 19 ~ip~DP~~Ws~~~V~~WL~W~~~ef~L~~i~--~~~f~m~G~~LC~lsked------F~~~~p-~~GdiL--~~hL~~Lk 87 (96)
T 2dkx_A 19 NITADPMDWSPSNVQKWLLWTEHQYRLPPMG--KAFQELAGKELCAMSEEQ------FRQRSP-LGGDVL--HAHLDIWK 87 (96)
T ss_dssp TCCSCGGGCCSSTHHHHHHHHHHHTTCCCCH--HHHSSCCHHHHHHSCHHH------HHHHCS-SSTHHH--HHHHHHHH
T ss_pred CCCCChhhCCHHHHHHHHHHHHHhcCCCCCC--cccCCCCHHHHHhCCHHH------HHHHcC-cchHHH--HHHHHHHH
Confidence 4467788999999999985 55777643 344469999999997653 555644 458863 44454444
Q ss_pred H
Q 032278 102 V 102 (144)
Q Consensus 102 v 102 (144)
-
T Consensus 88 ~ 88 (96)
T 2dkx_A 88 S 88 (96)
T ss_dssp H
T ss_pred h
Confidence 3
No 64
>2jv3_A ETS1 proto-oncogene; ETS-1 pointed (PNT) domain, MAP kinase phosphorylation site, alpha-helical bundle, transcription factor, DNA-binding, nucleus; NMR {Mus musculus} PDB: 2kmd_A*
Probab=94.55 E-value=0.0099 Score=43.34 Aligned_cols=56 Identities=21% Similarity=0.382 Sum_probs=38.3
Q ss_pred CCcccccCCChhHHHHHHH----hcCcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhcc-chH
Q 032278 26 DMPHALTLLSFQDVGLWLE----EINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKW-GDF 90 (144)
Q Consensus 26 ~~~l~~~~WS~EDVa~WLe----eiGL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~-gd~ 90 (144)
..+.+-..||.++|..||. +.+|+... |..=++||++|-.||++. |.+|+- .+ ||.
T Consensus 36 ~ip~DP~~WS~~~V~~WL~W~~~ef~L~~v~--~~~F~m~G~~LC~ls~ed------F~~~~p-~~~Gdi 96 (110)
T 2jv3_A 36 GIPKDPRQWTETHVRDWVMWAVNEFSLKGVD--FQKFCMSGAALCALGKEC------FLELAP-DFVGDI 96 (110)
T ss_dssp TCCSSSTTCCHHHHHHHHHHHHHHHTCCCCC--TTTTCCCHHHHHHTHHHH------HHHHSC-HHHHHH
T ss_pred CCCCChHhCCHHHHHHHHHHHHHhcCCCCCC--hhcCCCCHHHHHhCCHHH------HHHHcC-CCcHHH
Confidence 4467889999999999984 45666431 222379999999997653 555532 33 665
No 65
>2h80_A STAR-related lipid transfer protein 13; helical bundle, lipid binding protein; NMR {Homo sapiens} SCOP: a.60.1.3 PDB: 2jw2_A
Probab=94.15 E-value=0.024 Score=40.67 Aligned_cols=45 Identities=16% Similarity=0.226 Sum_probs=32.7
Q ss_pred hhHHHHHHHhcCcchHHHHhhHcCc--Chh----hhccCcccchHHHHHHH
Q 032278 36 FQDVGLWLEEINLGGYRQIFKENGV--NGE----YLEGMSMFTTEQILRFI 80 (144)
Q Consensus 36 ~EDVa~WLeeiGL~qYre~Fk~NnI--dG~----eLi~Ltk~T~e~il~~i 80 (144)
..|.|.||+.-||+||-+.|+++.+ |=. .=.-|.+.+.++..|-|
T Consensus 21 A~eAC~WLRaaGFPQYAqlyed~qFPIdi~~VkkDH~FLd~d~l~sL~RRl 71 (81)
T 2h80_A 21 AKEACDWLRAAGFPQYAQLYEDSQFPINIVAVKNDHDFLEKDLVEPLCRRL 71 (81)
T ss_dssp HHHHHHHHHHTTCHHHHHTTTTTCCCSCHHHHHTSCCSSCSTTHHHHHHHH
T ss_pred HHHHHHHHHHcCCcHHHHHhhcccccccHHHhccCCCccCHHHHHHHHHHH
Confidence 4578999999999999999999953 322 23446677777774443
No 66
>2dky_A RHO-GTPase-activating protein 7; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.60.1.3 PDB: 2gyt_A 2kap_A
Probab=94.08 E-value=0.012 Score=42.99 Aligned_cols=46 Identities=13% Similarity=0.196 Sum_probs=31.4
Q ss_pred CCChhHHHHHHHhcCcchHHHHhhHcCc--Chh----hhccCcccchHHHHH
Q 032278 33 LLSFQDVGLWLEEINLGGYRQIFKENGV--NGE----YLEGMSMFTTEQILR 78 (144)
Q Consensus 33 ~WS~EDVa~WLeeiGL~qYre~Fk~NnI--dG~----eLi~Ltk~T~e~il~ 78 (144)
.=...|.|.||+.-||+||-+.|+++.+ |=. .=.-|.+.+.++..|
T Consensus 20 E~eA~eAC~WLRaaGFPQYAqlyed~~FPIdi~~VkkDH~FLd~d~l~sL~R 71 (91)
T 2dky_A 20 QIEAKEACDWLRATGFPQYAQLYEDFLFPIDISLVKREHDFLDRDAIEALCR 71 (91)
T ss_dssp HHHHHHHHHHHHHHTCTTHHHHHHTTCCSCCHHHHHHHTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHhcccccccccHHHhccCCCccCHHHHHHHHH
Confidence 3345689999999999999999999853 222 123354555555533
No 67
>2ytu_A Friend leukemia integration 1 transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.49 E-value=0.052 Score=40.78 Aligned_cols=66 Identities=24% Similarity=0.275 Sum_probs=44.3
Q ss_pred cccccCCChhHHHHHHH----hcCcchHHHHhhHc-CcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHHH
Q 032278 28 PHALTLLSFQDVGLWLE----EINLGGYRQIFKEN-GVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKV 102 (144)
Q Consensus 28 ~l~~~~WS~EDVa~WLe----eiGL~qYre~Fk~N-nIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~kv 102 (144)
+.+-..||.++|..||. +.+|... -|..= +|||++|-.||++. |.+++----||. |-.-|+.||-
T Consensus 35 P~DP~~WS~~~V~~WL~Wa~~ef~L~~i--d~~~Fq~mnGk~LC~LskeD------F~~~~p~~~GDi--L~~hL~~Lr~ 104 (128)
T 2ytu_A 35 PADPTLWTQEHVRQWLEWAIKEYSLMEI--DTSFFQNMDGKELCKMNKED------FLRATTLYNTEV--LLSHLSYLRE 104 (128)
T ss_dssp CSCGGGCCTTHHHHHHHHHHHHTCCCSC--CCGGGSSCCTTHHHHCCHHH------HHHHSCHHHHHH--HHHHHHHHHH
T ss_pred CcchhhCCHHHHHHHHHHHHHhcCCCCC--ChHhCCCCCHHHHHcCCHHH------HHHHcCCCchHH--HHHHHHHHHh
Confidence 56778999999999985 4566442 13333 69999999997653 666642224776 4455666654
Q ss_pred H
Q 032278 103 A 103 (144)
Q Consensus 103 ~ 103 (144)
+
T Consensus 105 ~ 105 (128)
T 2ytu_A 105 S 105 (128)
T ss_dssp H
T ss_pred c
Confidence 4
No 68
>1sxe_A Transcriptional regulator ERG; alpha helical, signaling protein; NMR {Homo sapiens} SCOP: a.60.1.1
Probab=93.12 E-value=0.05 Score=38.72 Aligned_cols=57 Identities=28% Similarity=0.328 Sum_probs=38.8
Q ss_pred CcccccCCChhHHHHHHH----hcCcchHHHHhhH-cCcChhhhccCcccchHHHHHHHhHhhhccchHH
Q 032278 27 MPHALTLLSFQDVGLWLE----EINLGGYRQIFKE-NGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFI 91 (144)
Q Consensus 27 ~~l~~~~WS~EDVa~WLe----eiGL~qYre~Fk~-NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~i 91 (144)
.+.+-..||.++|..||. +.+|...- +.. +++||++|-.||++. |.+++--.=||.+
T Consensus 23 ip~DP~~Ws~~~V~~WL~W~~~ef~L~~i~--~~~F~~m~G~~LC~lt~ed------F~~~~p~~~GdiL 84 (97)
T 1sxe_A 23 VPADPTLWSTDHVRQWLEWAVKEYGLPDVN--ILLFQNIDGKELCKMTKDD------FQRLTPSYNADIL 84 (97)
T ss_dssp SCSSTTSCCHHHHHHHHHHHHHHHTCSSCC--GGGSTTCCHHHHTTCCHHH------HTTTSCHHHHHHH
T ss_pred CCcchhccCHHHHHHHHHHHHHhcCCCCCC--HHhcCCCCHHHHHhCCHHH------HHHHcCCCchHHH
Confidence 366788999999999985 55775431 333 379999999998753 5555322236653
No 69
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=93.03 E-value=0.029 Score=43.15 Aligned_cols=20 Identities=5% Similarity=0.115 Sum_probs=17.4
Q ss_pred hhhheecccceeEeeecCCc
Q 032278 9 TFLVYGRKQKSVNIWFNDMP 28 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~~ 28 (144)
.+|||||.|++|+||++...
T Consensus 377 ~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 377 ATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp SCEEEEETTTEEEEECCSCS
T ss_pred CEEEEEecCCeEEEEECCCC
Confidence 47999999999999999543
No 70
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=92.92 E-value=0.032 Score=43.04 Aligned_cols=17 Identities=12% Similarity=0.157 Sum_probs=15.9
Q ss_pred hhhheecccceeEeeec
Q 032278 9 TFLVYGRKQKSVNIWFN 25 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql 25 (144)
.+|||||.|++|+||++
T Consensus 157 ~~las~s~D~tv~~Wd~ 173 (393)
T 4gq1_A 157 QVIASVGDDCTLIIWRL 173 (393)
T ss_dssp EEEEEEETTSEEEEEEE
T ss_pred CEEEEEECCCeEEEEEC
Confidence 47999999999999998
No 71
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=91.87 E-value=0.026 Score=42.47 Aligned_cols=19 Identities=21% Similarity=0.281 Sum_probs=16.6
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 49 ~~l~tgs~D~~v~vW~~~~ 67 (321)
T 3ow8_A 49 ETVVTGSLDDLVKVWKWRD 67 (321)
T ss_dssp CEEEEEETTSCEEEEEEET
T ss_pred CEEEEEcCCCCEEEEECCC
Confidence 4699999999999999844
No 72
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=91.13 E-value=0.069 Score=39.66 Aligned_cols=18 Identities=28% Similarity=0.187 Sum_probs=16.4
Q ss_pred hhhheecccceeEeeecC
Q 032278 9 TFLVYGRKQKSVNIWFND 26 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~ 26 (144)
.+|||||.|++|+||.+.
T Consensus 26 ~~lasgs~D~~v~lwd~~ 43 (316)
T 3bg1_A 26 TRLATCSSDRSVKIFDVR 43 (316)
T ss_dssp CEEEEEETTTEEEEEEEE
T ss_pred CEEEEEeCCCeEEEEEec
Confidence 579999999999999984
No 73
>2e8p_A ELF3 protein; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.98 E-value=0.09 Score=37.49 Aligned_cols=57 Identities=14% Similarity=0.087 Sum_probs=38.9
Q ss_pred cccccCCChhHHHHHHHhc----CcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHH
Q 032278 28 PHALTLLSFQDVGLWLEEI----NLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFI 91 (144)
Q Consensus 28 ~l~~~~WS~EDVa~WLeei----GL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~i 91 (144)
+.+-..||.++|..||.-- +|.-=.--|..=+|||++|=+||++. |++|+-- -||.+
T Consensus 21 ~~dP~~Ws~~~V~~WL~Wavke~~~dl~~i~~~~f~m~G~~LC~msked------F~~~~p~-~GdiL 81 (92)
T 2e8p_A 21 GEQPQFWSKTQVLDWISYQVEKNKYDASAIDFSRCDMDGATLCNCALEE------LRLVFGP-LGDQL 81 (92)
T ss_dssp SSCGGGCCHHHHHHHHHHHHHHTTCCCSSCCTTTCCCCSHHHHHSCHHH------HHHHSGG-GHHHH
T ss_pred CCChhhcCHHHHHHHHHHHHHHhCCCCCCCChhhcCCCHHHHHcCCHHH------HHHHcCC-cHHHH
Confidence 4566899999999999633 44211111333379999999997753 7777655 78864
No 74
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=90.69 E-value=0.087 Score=37.17 Aligned_cols=19 Identities=21% Similarity=0.517 Sum_probs=16.8
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||.+..
T Consensus 80 ~~l~sgs~Dg~v~iw~~~~ 98 (318)
T 4ggc_A 80 NYLAVGTSSAEVQLWDVQQ 98 (318)
T ss_dssp SEEEEEETTSEEEEEETTT
T ss_pred CEEEEEECCCcEEEeecCC
Confidence 4789999999999999854
No 75
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=90.66 E-value=0.087 Score=38.64 Aligned_cols=19 Identities=26% Similarity=0.331 Sum_probs=16.9
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 68 ~~l~s~s~D~~v~iWd~~~ 86 (297)
T 2pm7_B 68 TILASCSYDGKVMIWKEEN 86 (297)
T ss_dssp SEEEEEETTTEEEEEEBSS
T ss_pred CEEEEEcCCCEEEEEEcCC
Confidence 5799999999999999853
No 76
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=90.55 E-value=0.08 Score=39.50 Aligned_cols=18 Identities=33% Similarity=0.564 Sum_probs=16.3
Q ss_pred hhhheecccceeEeeecC
Q 032278 9 TFLVYGRKQKSVNIWFND 26 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~ 26 (144)
.+|||||.|++|+||++.
T Consensus 40 ~~l~sgs~D~~v~iWd~~ 57 (343)
T 2xzm_R 40 PVLISGSRDKTVMIWKLY 57 (343)
T ss_dssp CEEEEEETTSCEEEEEEC
T ss_pred CEEEEEcCCCEEEEEECC
Confidence 479999999999999984
No 77
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=90.54 E-value=0.083 Score=37.65 Aligned_cols=29 Identities=7% Similarity=-0.054 Sum_probs=21.7
Q ss_pred hhhheecccceeEeeecCCcccccCCChh
Q 032278 9 TFLVYGRKQKSVNIWFNDMPHALTLLSFQ 37 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~~l~~~~WS~E 37 (144)
.+|||||.|++|+||++...........+
T Consensus 328 ~~l~s~~~dg~v~iw~~~~~~~~~~~~~~ 356 (369)
T 3zwl_B 328 TSYASGGEDGFIRLHHFEKSYFDFKYDVE 356 (369)
T ss_dssp SEEEEEETTSEEEEEEECHHHHTCCCHHH
T ss_pred CEEEEEcCCCeEEEEECccccchhHHHHH
Confidence 47999999999999999775543333333
No 78
>2qb0_B Telsam domain - lysozyme chimera; helical polymer, hydrolase regulator; 2.56A {Escherichia coli}
Probab=90.53 E-value=0.096 Score=41.39 Aligned_cols=43 Identities=23% Similarity=0.228 Sum_probs=31.8
Q ss_pred CcccccCCChhHHHHHHH----hcCcchHHHHhhHcCcChhhhccCccc
Q 032278 27 MPHALTLLSFQDVGLWLE----EINLGGYRQIFKENGVNGEYLEGMSMF 71 (144)
Q Consensus 27 ~~l~~~~WS~EDVa~WLe----eiGL~qYre~Fk~NnIdG~eLi~Ltk~ 71 (144)
.+.+-..||.++|..||. +..|+... |..=.+||++|-+||++
T Consensus 8 ~p~dP~~Wt~~~V~~Wl~w~~~~f~l~~~~--~~~f~~~G~~Lc~m~~~ 54 (241)
T 2qb0_B 8 LRLQPIYWSRDDVAQWLKWAENEFSLRPID--SNTFEMNGKALLLLTKE 54 (241)
T ss_dssp GGSCGGGCCHHHHHHHHHHHHHHTTCSCCC--TTTTCSCHHHHTTCCHH
T ss_pred CCCChhhCCHHHHHHHHHHHHHhcCCCCCC--HHhcCCChHHHHHcCHH
Confidence 366778999999999996 45665541 23334999999999764
No 79
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=90.46 E-value=0.086 Score=38.66 Aligned_cols=18 Identities=11% Similarity=0.178 Sum_probs=16.4
Q ss_pred hhhheecccceeEeeecC
Q 032278 9 TFLVYGRKQKSVNIWFND 26 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~ 26 (144)
.+|||||.|++|+||++.
T Consensus 22 ~~las~s~D~~v~iw~~~ 39 (297)
T 2pm7_B 22 KRMATCSSDKTIKIFEVE 39 (297)
T ss_dssp SEEEEEETTSCEEEEEBC
T ss_pred CEEEEEeCCCEEEEEecC
Confidence 579999999999999984
No 80
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=89.31 E-value=0.12 Score=38.91 Aligned_cols=18 Identities=22% Similarity=0.475 Sum_probs=16.3
Q ss_pred hhhheecccceeEeeecC
Q 032278 9 TFLVYGRKQKSVNIWFND 26 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~ 26 (144)
.+|||||.|++|+||.+.
T Consensus 29 ~~las~~~D~~i~iw~~~ 46 (345)
T 3fm0_A 29 TLLASCGGDRRIRIWGTE 46 (345)
T ss_dssp SCEEEEETTSCEEEEEEE
T ss_pred CEEEEEcCCCeEEEEEcC
Confidence 579999999999999884
No 81
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=89.10 E-value=0.12 Score=40.08 Aligned_cols=18 Identities=17% Similarity=0.370 Sum_probs=16.3
Q ss_pred hhhheecccceeEeeecC
Q 032278 9 TFLVYGRKQKSVNIWFND 26 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~ 26 (144)
.+|||||.|++|+||++.
T Consensus 133 ~~lasGs~dg~i~lWd~~ 150 (435)
T 4e54_B 133 STVAVGSKGGDIMLWNFG 150 (435)
T ss_dssp TCEEEEETTSCEEEECSS
T ss_pred CEEEEEeCCCEEEEEECC
Confidence 479999999999999983
No 82
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=88.94 E-value=0.14 Score=38.09 Aligned_cols=18 Identities=17% Similarity=0.373 Sum_probs=16.2
Q ss_pred hhhheecccceeEeeecC
Q 032278 9 TFLVYGRKQKSVNIWFND 26 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~ 26 (144)
.+|||||.|++|+||++.
T Consensus 31 ~~l~s~s~D~~v~~W~~~ 48 (319)
T 3frx_A 31 NLLLSASRDKTLISWKLT 48 (319)
T ss_dssp TEEEEEETTSEEEEEEEE
T ss_pred cEEEEecCCccEEEecCC
Confidence 579999999999999873
No 83
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=88.50 E-value=0.16 Score=37.79 Aligned_cols=19 Identities=11% Similarity=0.323 Sum_probs=16.7
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 78 ~~l~s~s~D~~v~~wd~~~ 96 (319)
T 3frx_A 78 AYALSASWDKTLRLWDVAT 96 (319)
T ss_dssp SEEEEEETTSEEEEEETTT
T ss_pred CEEEEEeCCCEEEEEECCC
Confidence 4799999999999999843
No 84
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=88.22 E-value=0.15 Score=39.12 Aligned_cols=19 Identities=11% Similarity=0.060 Sum_probs=16.9
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 282 ~~lasgs~D~~V~iwd~~~ 300 (365)
T 4h5i_A 282 ELAVLASNDNSIALVKLKD 300 (365)
T ss_dssp CEEEEEETTSCEEEEETTT
T ss_pred CceEEEcCCCEEEEEECCC
Confidence 4799999999999999854
No 85
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=88.22 E-value=0.16 Score=37.32 Aligned_cols=19 Identities=16% Similarity=0.511 Sum_probs=16.6
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||.+..
T Consensus 110 ~~l~sgs~D~~v~lWd~~~ 128 (304)
T 2ynn_A 110 PYVLSGSDDLTVKLWNWEN 128 (304)
T ss_dssp SEEEEEETTSCEEEEEGGG
T ss_pred CEEEEECCCCeEEEEECCC
Confidence 4789999999999999843
No 86
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=88.00 E-value=0.18 Score=38.43 Aligned_cols=18 Identities=11% Similarity=0.348 Sum_probs=16.2
Q ss_pred hhhheecccceeEeeecC
Q 032278 9 TFLVYGRKQKSVNIWFND 26 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~ 26 (144)
.+|||||.|++|+||...
T Consensus 79 ~~l~s~s~D~~v~iWd~~ 96 (380)
T 3iz6_a 79 NWIVSASQDGRLIVWNAL 96 (380)
T ss_dssp SCEEEEETTSEEEEEETT
T ss_pred CEEEEEeCCCeEEEEECC
Confidence 479999999999999973
No 87
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=87.87 E-value=0.16 Score=37.73 Aligned_cols=19 Identities=21% Similarity=0.354 Sum_probs=16.9
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 72 ~~l~s~s~D~~v~iWd~~~ 90 (316)
T 3bg1_A 72 NILASCSYDRKVIIWREEN 90 (316)
T ss_dssp SCEEEEETTSCEEEECCSS
T ss_pred CEEEEEECCCEEEEEECCC
Confidence 5899999999999999853
No 88
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=87.81 E-value=0.17 Score=37.81 Aligned_cols=18 Identities=39% Similarity=0.584 Sum_probs=16.3
Q ss_pred hhhheecccceeEeeecC
Q 032278 9 TFLVYGRKQKSVNIWFND 26 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~ 26 (144)
.+|||||.|++|+||++.
T Consensus 120 ~~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 120 YYLATCSRDKSVWIWETD 137 (330)
T ss_dssp CEEEEEETTSCEEEEECC
T ss_pred CEEEEEeCCCEEEEEecc
Confidence 479999999999999983
No 89
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=87.54 E-value=0.2 Score=34.82 Aligned_cols=18 Identities=6% Similarity=0.165 Sum_probs=16.3
Q ss_pred hhhheecccceeEeeecC
Q 032278 9 TFLVYGRKQKSVNIWFND 26 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~ 26 (144)
.+|||||.|++|+||++.
T Consensus 24 ~~l~~~~~dg~i~iw~~~ 41 (351)
T 3f3f_A 24 RHVATCSSDQHIKVFKLD 41 (351)
T ss_dssp SEEEEEETTSEEEEEEEC
T ss_pred CEEEEeeCCCeEEEEECC
Confidence 479999999999999985
No 90
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=87.46 E-value=0.19 Score=38.93 Aligned_cols=18 Identities=0% Similarity=-0.167 Sum_probs=16.3
Q ss_pred hhhheecccceeEeeecC
Q 032278 9 TFLVYGRKQKSVNIWFND 26 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~ 26 (144)
.+|||||.|++|+||.+.
T Consensus 178 ~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 178 NQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp TEEEEECSSSCEEEEETT
T ss_pred CEEEEEeCCCEEEEeecc
Confidence 479999999999999984
No 91
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=87.46 E-value=0.2 Score=37.32 Aligned_cols=19 Identities=16% Similarity=0.344 Sum_probs=16.6
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 89 ~~l~s~s~D~~v~lwd~~~ 107 (343)
T 2xzm_R 89 CFAISSSWDKTLRLWDLRT 107 (343)
T ss_dssp TEEEEEETTSEEEEEETTS
T ss_pred CEEEEEcCCCcEEEEECCC
Confidence 4789999999999999843
No 92
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=87.34 E-value=0.18 Score=42.31 Aligned_cols=18 Identities=11% Similarity=-0.060 Sum_probs=16.5
Q ss_pred hhhheecccceeEeeecC
Q 032278 9 TFLVYGRKQKSVNIWFND 26 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~ 26 (144)
.+|||||+|++|+||++.
T Consensus 324 ~~laS~S~D~tvklWD~~ 341 (524)
T 2j04_B 324 TVVSTVAVDGYFYIFNPK 341 (524)
T ss_dssp CEEEEEETTSEEEEECGG
T ss_pred eEEEEeccCCeEEEEECC
Confidence 579999999999999983
No 93
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=87.19 E-value=0.18 Score=38.45 Aligned_cols=19 Identities=21% Similarity=0.219 Sum_probs=17.0
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 283 ~~lasgs~D~~i~iwd~~~ 301 (357)
T 4g56_B 283 PFLASISEDCTVAVLDADF 301 (357)
T ss_dssp CCEEEEETTSCEEEECTTS
T ss_pred CEEEEEeCCCEEEEEECCC
Confidence 5799999999999999854
No 94
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=87.14 E-value=0.21 Score=36.67 Aligned_cols=19 Identities=11% Similarity=0.471 Sum_probs=16.9
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 199 ~~l~s~s~D~~i~iWd~~~ 217 (304)
T 2ynn_A 199 PYMITASDDLTIKIWDYQT 217 (304)
T ss_dssp CEEEEEETTSEEEEEETTT
T ss_pred CEEEEEcCCCeEEEEeCCC
Confidence 4799999999999999855
No 95
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=87.14 E-value=0.2 Score=42.36 Aligned_cols=19 Identities=16% Similarity=0.170 Sum_probs=17.1
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+||+||.|++|+||++..
T Consensus 194 ~~LaSgS~D~TIkIWDl~T 212 (356)
T 2w18_A 194 EALLGTTIMNNIVIWNLKT 212 (356)
T ss_dssp TEEEEEETTSEEEEEETTT
T ss_pred ceEEEecCCCcEEEEECCC
Confidence 5799999999999999954
No 96
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=86.98 E-value=0.21 Score=37.75 Aligned_cols=18 Identities=28% Similarity=0.637 Sum_probs=16.4
Q ss_pred hhhheecccceeEeeecC
Q 032278 9 TFLVYGRKQKSVNIWFND 26 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~ 26 (144)
.+|||||.|++|+||++.
T Consensus 77 ~~l~s~s~dg~v~vwd~~ 94 (437)
T 3gre_A 77 PYLITGSDQGVIKIWNLK 94 (437)
T ss_dssp CEEEEEETTSEEEEEEHH
T ss_pred CEEEEecCCceEEEeECc
Confidence 589999999999999984
No 97
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=86.86 E-value=0.19 Score=38.72 Aligned_cols=20 Identities=15% Similarity=0.195 Sum_probs=17.4
Q ss_pred hhhhheecccceeEeeecCC
Q 032278 8 LTFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 8 ~~~LATGSmDKsV~IWql~~ 27 (144)
-.+|||||.|++|+||++..
T Consensus 270 ~~~lasgs~D~~i~vwd~~~ 289 (344)
T 4gqb_B 270 VPFLASLSEDCSLAVLDSSL 289 (344)
T ss_dssp SCCEEEEETTSCEEEECTTC
T ss_pred CeEEEEEeCCCeEEEEECCC
Confidence 45899999999999998854
No 98
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=86.78 E-value=0.22 Score=34.65 Aligned_cols=20 Identities=15% Similarity=0.210 Sum_probs=17.8
Q ss_pred hhhheecccceeEeeecCCc
Q 032278 9 TFLVYGRKQKSVNIWFNDMP 28 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~~ 28 (144)
.+|||||.|++|+||++...
T Consensus 231 ~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 231 QLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp EEEEEEETTSCEEEEEEEEC
T ss_pred eEEEEEcCCCeEEEEeCCCC
Confidence 58999999999999999653
No 99
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=85.66 E-value=0.28 Score=37.24 Aligned_cols=18 Identities=17% Similarity=0.229 Sum_probs=16.1
Q ss_pred hhhheecccceeEeeecC
Q 032278 9 TFLVYGRKQKSVNIWFND 26 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~ 26 (144)
.+|||||.|++|+||+..
T Consensus 77 ~~l~s~s~Dg~v~vWd~~ 94 (354)
T 2pbi_B 77 RRIVSSSQDGKVIVWDSF 94 (354)
T ss_dssp SEEEEEETTSEEEEEETT
T ss_pred CEEEEEeCCCeEEEEECC
Confidence 479999999999999973
No 100
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=85.53 E-value=0.27 Score=36.70 Aligned_cols=18 Identities=11% Similarity=0.239 Sum_probs=16.3
Q ss_pred hhheecccceeEeeecCC
Q 032278 10 FLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 10 ~LATGSmDKsV~IWql~~ 27 (144)
+|||||.|++|+||.+..
T Consensus 26 ~las~~~D~~i~lw~~~~ 43 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKY 43 (330)
T ss_dssp EEEEEESSSCEEEEECSS
T ss_pred EEEEEcCCCEEEEEEecC
Confidence 799999999999999853
No 101
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=85.52 E-value=0.27 Score=37.40 Aligned_cols=20 Identities=5% Similarity=-0.009 Sum_probs=17.5
Q ss_pred hhhheecccceeEeeecCCc
Q 032278 9 TFLVYGRKQKSVNIWFNDMP 28 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~~ 28 (144)
.+|||||.|++|+||++...
T Consensus 262 ~~l~s~s~D~~i~lwd~~~~ 281 (380)
T 3iz6_a 262 QRFGTGSDDGTCRLFDMRTG 281 (380)
T ss_dssp SEEEEECSSSCEEEEETTTT
T ss_pred CeEEEEcCCCeEEEEECCCC
Confidence 47999999999999999653
No 102
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=85.48 E-value=0.25 Score=37.48 Aligned_cols=19 Identities=0% Similarity=0.163 Sum_probs=17.0
Q ss_pred hhhheecccce-eEeeecCC
Q 032278 9 TFLVYGRKQKS-VNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKs-V~IWql~~ 27 (144)
.+|||||.|++ |+||++..
T Consensus 208 ~~l~s~s~d~~~v~iwd~~~ 227 (355)
T 3vu4_A 208 DMVATCSQDGTIIRVFKTED 227 (355)
T ss_dssp SEEEEEETTCSEEEEEETTT
T ss_pred CEEEEEeCCCCEEEEEECCC
Confidence 57999999999 99999954
No 103
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=85.23 E-value=0.28 Score=36.87 Aligned_cols=19 Identities=32% Similarity=0.443 Sum_probs=16.7
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 118 ~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 118 NLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp SEEEEEETTSCEEEEEECT
T ss_pred CEEEEEECCCeEEEEECCC
Confidence 4799999999999999843
No 104
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=85.00 E-value=0.31 Score=36.36 Aligned_cols=18 Identities=17% Similarity=0.338 Sum_probs=16.1
Q ss_pred hhhheecccceeEeeecC
Q 032278 9 TFLVYGRKQKSVNIWFND 26 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~ 26 (144)
.+|||||.|++|+||.+.
T Consensus 68 ~~l~s~s~Dg~v~iWd~~ 85 (340)
T 1got_B 68 RLLLSASQDGKLIIWDSY 85 (340)
T ss_dssp SEEEEEETTTEEEEEETT
T ss_pred CEEEEEeCCCcEEEEECC
Confidence 479999999999999974
No 105
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=84.87 E-value=0.36 Score=36.61 Aligned_cols=20 Identities=5% Similarity=-0.109 Sum_probs=17.5
Q ss_pred hhhheecccceeEeeecCCc
Q 032278 9 TFLVYGRKQKSVNIWFNDMP 28 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~~ 28 (144)
.+|||||.|++|+||++..+
T Consensus 253 ~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 253 SKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp CEEEEEETTCEEEEEESSCC
T ss_pred CEEEEEECCCEEEEEEccCC
Confidence 47999999999999999653
No 106
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=84.65 E-value=0.34 Score=35.12 Aligned_cols=20 Identities=15% Similarity=0.303 Sum_probs=17.2
Q ss_pred hhhheecccceeEeeecCCc
Q 032278 9 TFLVYGRKQKSVNIWFNDMP 28 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~~ 28 (144)
.+|||||.|++|+||++...
T Consensus 347 ~~l~s~~~dg~i~iw~~~~~ 366 (408)
T 4a11_B 347 QELYSGSRDCNILAWVPSLY 366 (408)
T ss_dssp TEEEEEETTSCEEEEEECC-
T ss_pred CEEEEECCCCeEEEEeCCCC
Confidence 57999999999999999653
No 107
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=84.45 E-value=0.35 Score=34.35 Aligned_cols=19 Identities=16% Similarity=0.293 Sum_probs=16.9
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 228 ~~l~s~s~Dg~i~iwd~~~ 246 (340)
T 4aow_A 228 SLCASGGKDGQAMLWDLNE 246 (340)
T ss_dssp SEEEEEETTCEEEEEETTT
T ss_pred CEEEEEeCCCeEEEEEecc
Confidence 4799999999999999855
No 108
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=84.40 E-value=0.31 Score=36.15 Aligned_cols=19 Identities=0% Similarity=-0.216 Sum_probs=16.3
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 49 ~~l~sg~~Dg~v~iwd~~~ 67 (343)
T 3lrv_A 49 WVCMCRCEDGALHFTQLKD 67 (343)
T ss_dssp EEEEEEEETTEEEEEEESS
T ss_pred CEEEEECCCCcEEEEECCC
Confidence 4689999999999999854
No 109
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=84.36 E-value=0.31 Score=37.53 Aligned_cols=19 Identities=26% Similarity=0.371 Sum_probs=16.8
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||.+..
T Consensus 140 ~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 140 TQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp SEEEEEETTSCEEEEETTT
T ss_pred CEEEEEeCCCeEEEEECCC
Confidence 5799999999999999843
No 110
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=83.95 E-value=0.33 Score=39.85 Aligned_cols=20 Identities=30% Similarity=0.471 Sum_probs=17.4
Q ss_pred hhhheecccceeEeeecCCc
Q 032278 9 TFLVYGRKQKSVNIWFNDMP 28 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~~ 28 (144)
.+|||||.|++|+||++..+
T Consensus 549 ~~lasgs~D~~v~lW~~~~~ 568 (611)
T 1nr0_A 549 VRLATGSLDNSVIVWNMNKP 568 (611)
T ss_dssp SEEEEEETTSCEEEEETTCT
T ss_pred CEEEEEECCCcEEEEECCCc
Confidence 47999999999999999653
No 111
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=83.71 E-value=0.37 Score=39.85 Aligned_cols=18 Identities=22% Similarity=0.475 Sum_probs=16.3
Q ss_pred hhhheecccceeEeeecC
Q 032278 9 TFLVYGRKQKSVNIWFND 26 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~ 26 (144)
.+|||||.|++|+||++.
T Consensus 396 ~~l~s~s~D~~i~~W~~~ 413 (694)
T 3dm0_A 396 DIIVSASRDKSIILWKLT 413 (694)
T ss_dssp SEEEEEETTSEEEEEECC
T ss_pred CEEEEEeCCCcEEEEEcc
Confidence 579999999999999884
No 112
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=83.62 E-value=0.35 Score=37.21 Aligned_cols=17 Identities=18% Similarity=0.290 Sum_probs=15.5
Q ss_pred hhhheecccceeEeeec
Q 032278 9 TFLVYGRKQKSVNIWFN 25 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql 25 (144)
.+||+||.|++|+||+.
T Consensus 102 ~~las~~~d~~v~lw~~ 118 (393)
T 4gq1_A 102 LFLACVCQDNTVRLIIT 118 (393)
T ss_dssp EEEEEEETTSCEEEEEE
T ss_pred CEEEEEeCCCcEEEEEC
Confidence 36999999999999987
No 113
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=83.31 E-value=0.41 Score=35.92 Aligned_cols=19 Identities=5% Similarity=0.176 Sum_probs=16.8
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.++||||.|++|+||.+..
T Consensus 93 ~~l~s~s~D~~i~lWd~~~ 111 (321)
T 3ow8_A 93 PIAASSSLDAHIRLWDLEN 111 (321)
T ss_dssp SEEEEEETTSEEEEEETTT
T ss_pred CEEEEEeCCCcEEEEECCC
Confidence 5789999999999999844
No 114
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=83.06 E-value=0.39 Score=36.82 Aligned_cols=19 Identities=21% Similarity=0.517 Sum_probs=16.8
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||.+..
T Consensus 160 ~~lasgs~Dg~v~iWd~~~ 178 (420)
T 4gga_A 160 NYLAVGTSSAEVQLWDVQQ 178 (420)
T ss_dssp SEEEEEETTSCEEEEETTT
T ss_pred CEEEEEECCCeEEEEEcCC
Confidence 4799999999999999854
No 115
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=82.68 E-value=0.46 Score=33.78 Aligned_cols=19 Identities=26% Similarity=0.440 Sum_probs=17.1
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 55 ~~l~~~~~dg~i~iw~~~~ 73 (368)
T 3mmy_A 55 NFLIAGSWANDVRCWEVQD 73 (368)
T ss_dssp EEEEEEETTSEEEEEEECT
T ss_pred eEEEEECCCCcEEEEEcCC
Confidence 5899999999999999953
No 116
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=82.32 E-value=0.48 Score=33.09 Aligned_cols=19 Identities=16% Similarity=0.337 Sum_probs=16.5
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 30 ~~l~s~~~dg~v~vw~~~~ 48 (313)
T 3odt_A 30 SKVASVSRDGTVRLWSKDD 48 (313)
T ss_dssp TEEEEEETTSEEEEEEESS
T ss_pred CEEEEEEcCCcEEEEECCC
Confidence 4699999999999999843
No 117
>3idw_A Actin cytoskeleton-regulatory complex protein SLA; clathrin adaptor, endocytosis, SAM domain, yeast, actin-BIND membrane, endosome; 1.85A {Saccharomyces cerevisiae}
Probab=82.10 E-value=1.5 Score=30.50 Aligned_cols=43 Identities=19% Similarity=0.386 Sum_probs=34.5
Q ss_pred chHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHH
Q 032278 49 GGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELR 98 (144)
Q Consensus 49 ~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~ 98 (144)
+.|-..|.+|.|+-.-|..| +..+||-++. +-||.|...|=|.
T Consensus 20 ~rYA~~F~~~ri~e~mL~Dl----~~~~Lr~LGi---~eGDIIrVmk~l~ 62 (72)
T 3idw_A 20 QRYTINFDREQLTEDMMPDI----NNSMLRTLGL---REGDIVRVMKHLD 62 (72)
T ss_dssp HHHHHHHHHTTCCGGGGGGC----CHHHHHHTTC---CHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCCHHHHhhC----CHHHHHHcCC---chhhHHHHHHHHH
Confidence 47999999999999999999 4566776665 4699998776554
No 118
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=81.85 E-value=0.56 Score=35.36 Aligned_cols=19 Identities=16% Similarity=0.298 Sum_probs=17.1
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 95 ~~l~s~s~dg~v~vw~~~~ 113 (402)
T 2aq5_A 95 NVIASGSEDCTVMVWEIPD 113 (402)
T ss_dssp TEEEEEETTSEEEEEECCT
T ss_pred CEEEEEeCCCeEEEEEccC
Confidence 5899999999999999854
No 119
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=81.70 E-value=0.47 Score=35.96 Aligned_cols=20 Identities=5% Similarity=0.082 Sum_probs=17.4
Q ss_pred hhhheecccceeEeeecCCc
Q 032278 9 TFLVYGRKQKSVNIWFNDMP 28 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~~ 28 (144)
.+|||||.|++|+||++...
T Consensus 253 ~~l~s~s~D~~v~lwd~~~~ 272 (354)
T 2pbi_B 253 DAFASGSDDATCRLYDLRAD 272 (354)
T ss_dssp SEEEEEETTSCEEEEETTTT
T ss_pred CEEEEEeCCCeEEEEECCCC
Confidence 47999999999999998653
No 120
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=81.61 E-value=0.48 Score=35.34 Aligned_cols=20 Identities=5% Similarity=0.082 Sum_probs=17.3
Q ss_pred hhhheecccceeEeeecCCc
Q 032278 9 TFLVYGRKQKSVNIWFNDMP 28 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~~ 28 (144)
.+|||||.|++|+||++...
T Consensus 239 ~~l~s~s~d~~v~iwd~~~~ 258 (340)
T 1got_B 239 NAFATGSDDATCRLFDLRAD 258 (340)
T ss_dssp SEEEEEETTSCEEEEETTTT
T ss_pred CEEEEEcCCCcEEEEECCCC
Confidence 47999999999999998653
No 121
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=81.54 E-value=0.5 Score=38.77 Aligned_cols=18 Identities=22% Similarity=0.434 Sum_probs=16.4
Q ss_pred hhhheecccceeEeeecC
Q 032278 9 TFLVYGRKQKSVNIWFND 26 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~ 26 (144)
.+|||||.|++|+||++.
T Consensus 72 ~~lasg~~d~~v~lWd~~ 89 (611)
T 1nr0_A 72 YYCASGDVHGNVRIWDTT 89 (611)
T ss_dssp SEEEEEETTSEEEEEESS
T ss_pred cEEEEEeCCCCEEEeECC
Confidence 579999999999999984
No 122
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=81.50 E-value=0.52 Score=36.50 Aligned_cols=19 Identities=26% Similarity=0.693 Sum_probs=16.8
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 309 ~~l~sgs~D~~i~iwd~~~ 327 (410)
T 1vyh_C 309 PFLLSGSRDKTIKMWDVST 327 (410)
T ss_dssp CEEEEEETTSEEEEEETTT
T ss_pred CEEEEEeCCCeEEEEECCC
Confidence 3799999999999999854
No 123
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=81.39 E-value=0.5 Score=35.03 Aligned_cols=21 Identities=10% Similarity=0.164 Sum_probs=17.8
Q ss_pred hhhheecccceeEeeecCCcc
Q 032278 9 TFLVYGRKQKSVNIWFNDMPH 29 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~~l 29 (144)
.+|||||.|++|+||++....
T Consensus 183 ~~lasg~~dg~i~iwd~~~~~ 203 (343)
T 3lrv_A 183 LLLALYSPDGILDVYNLSSPD 203 (343)
T ss_dssp CEEEEECTTSCEEEEESSCTT
T ss_pred CEEEEEcCCCEEEEEECCCCC
Confidence 479999999999999996533
No 124
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=81.30 E-value=0.5 Score=36.58 Aligned_cols=18 Identities=11% Similarity=0.508 Sum_probs=16.4
Q ss_pred hhhheecccceeEeeecC
Q 032278 9 TFLVYGRKQKSVNIWFND 26 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~ 26 (144)
.+|||||.|++|+||.+.
T Consensus 121 ~~l~s~s~Dg~i~vwd~~ 138 (410)
T 1vyh_C 121 SVMVSASEDATIKVWDYE 138 (410)
T ss_dssp SEEEEEESSSCEEEEETT
T ss_pred CEEEEEeCCCeEEEEECC
Confidence 579999999999999984
No 125
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=81.30 E-value=0.54 Score=35.08 Aligned_cols=19 Identities=26% Similarity=0.350 Sum_probs=16.9
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 41 ~~la~g~~dg~v~iw~~~~ 59 (447)
T 3dw8_B 41 ELLATGDKGGRVVIFQQEQ 59 (447)
T ss_dssp SEEEEEETTSEEEEEEECC
T ss_pred CEEEEEcCCCeEEEEEecC
Confidence 4799999999999999853
No 126
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=81.23 E-value=0.51 Score=34.02 Aligned_cols=20 Identities=25% Similarity=0.484 Sum_probs=17.3
Q ss_pred hhhheecccceeEeeecCCc
Q 032278 9 TFLVYGRKQKSVNIWFNDMP 28 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~~ 28 (144)
.+|||||.|++|+||.+...
T Consensus 250 ~~l~sg~~dg~i~vwd~~~~ 269 (312)
T 4ery_A 250 KWIVSGSEDNLVYIWNLQTK 269 (312)
T ss_dssp CEEEECCTTSCEEEEETTTC
T ss_pred cEEEEECCCCEEEEEECCCc
Confidence 47999999999999999653
No 127
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=81.11 E-value=0.55 Score=33.38 Aligned_cols=19 Identities=16% Similarity=0.191 Sum_probs=17.0
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||.+..
T Consensus 286 ~~l~s~~~dg~i~iwd~~~ 304 (368)
T 3mmy_A 286 GTLATVGSDGRFSFWDKDA 304 (368)
T ss_dssp CCEEEEETTSCEEEEETTT
T ss_pred CEEEEEccCCeEEEEECCC
Confidence 4799999999999999954
No 128
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=80.72 E-value=0.46 Score=34.84 Aligned_cols=19 Identities=5% Similarity=0.099 Sum_probs=14.1
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 68 ~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 68 NRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp CCEEEEETTSSEEEC----
T ss_pred CEEEEEeCCCeEEEEEcCC
Confidence 4799999999999999854
No 129
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=80.57 E-value=0.55 Score=33.63 Aligned_cols=18 Identities=17% Similarity=0.200 Sum_probs=16.4
Q ss_pred hhhheecccceeEeeecC
Q 032278 9 TFLVYGRKQKSVNIWFND 26 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~ 26 (144)
.+|||||.|++|+||.+.
T Consensus 24 ~~l~~~~~dg~i~iw~~~ 41 (379)
T 3jrp_A 24 KRLATCSSDKTIKIFEVE 41 (379)
T ss_dssp SEEEEEETTSCEEEEEEE
T ss_pred CEEEEEECCCcEEEEecC
Confidence 479999999999999984
No 130
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=80.52 E-value=0.54 Score=35.94 Aligned_cols=19 Identities=26% Similarity=0.576 Sum_probs=16.8
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 136 ~~l~s~~~d~~i~iwd~~~ 154 (393)
T 1erj_A 136 KFLATGAEDRLIRIWDIEN 154 (393)
T ss_dssp SEEEEEETTSCEEEEETTT
T ss_pred CEEEEEcCCCeEEEEECCC
Confidence 4799999999999999843
No 131
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=80.43 E-value=0.55 Score=41.69 Aligned_cols=20 Identities=25% Similarity=0.286 Sum_probs=17.6
Q ss_pred hhhheecccceeEeeecCCc
Q 032278 9 TFLVYGRKQKSVNIWFNDMP 28 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~~ 28 (144)
.+|||||.|++|++|++...
T Consensus 448 ~~laSgs~DgtVrlWd~~~g 467 (902)
T 2oaj_A 448 TAFITGHSNGSVRIYDASHG 467 (902)
T ss_dssp EEEEEEETTSEEEEEESSCC
T ss_pred cEEEEecCCCcEEEEECCCc
Confidence 47999999999999999654
No 132
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=80.16 E-value=0.55 Score=39.72 Aligned_cols=18 Identities=11% Similarity=0.043 Sum_probs=16.4
Q ss_pred hhheecccceeEeeecCC
Q 032278 10 FLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 10 ~LATGSmDKsV~IWql~~ 27 (144)
++|+||.|++|+||++..
T Consensus 297 ~lASgS~DgTIkIWDl~t 314 (356)
T 2w18_A 297 CAAAILTSGTIAIWDLLL 314 (356)
T ss_dssp EEEEEETTSCEEEEETTT
T ss_pred EEEEEcCCCcEEEEECCC
Confidence 589999999999999955
No 133
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=79.92 E-value=0.66 Score=33.43 Aligned_cols=19 Identities=26% Similarity=0.485 Sum_probs=16.8
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||.+..
T Consensus 78 ~~l~s~~~d~~i~vwd~~~ 96 (312)
T 4ery_A 78 NLLVSASDDKTLKIWDVSS 96 (312)
T ss_dssp SEEEEEETTSEEEEEETTT
T ss_pred CEEEEECCCCEEEEEECCC
Confidence 4799999999999999854
No 134
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=79.80 E-value=0.61 Score=33.42 Aligned_cols=20 Identities=25% Similarity=0.229 Sum_probs=17.2
Q ss_pred hhhhheecccceeEeeecCC
Q 032278 8 LTFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 8 ~~~LATGSmDKsV~IWql~~ 27 (144)
-.+|||||.|++|+||++..
T Consensus 69 ~~~l~s~~~dg~v~iwd~~~ 88 (379)
T 3jrp_A 69 GTILASCSYDGKVLIWKEEN 88 (379)
T ss_dssp CSEEEEEETTSCEEEEEEET
T ss_pred CCEEEEeccCCEEEEEEcCC
Confidence 35899999999999999843
No 135
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=79.71 E-value=0.66 Score=33.99 Aligned_cols=20 Identities=20% Similarity=0.393 Sum_probs=17.6
Q ss_pred hhhheecccceeEeeecCCc
Q 032278 9 TFLVYGRKQKSVNIWFNDMP 28 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~~ 28 (144)
.+|||||.|++|+||.+...
T Consensus 27 ~~l~s~~~dg~i~iw~~~~~ 46 (397)
T 1sq9_A 27 SFTVSCSGDGYLKVWDNKLL 46 (397)
T ss_dssp SEEEEEETTSEEEEEESBCC
T ss_pred CeEEEEcCCCEEEEEECCCc
Confidence 58999999999999999553
No 136
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=79.66 E-value=0.58 Score=39.26 Aligned_cols=19 Identities=11% Similarity=0.003 Sum_probs=17.0
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 226 ~~LAs~s~DgtvrlWd~~~ 244 (524)
T 2j04_B 226 GCLSFVSQEGTINFLEIID 244 (524)
T ss_dssp CEEEEEETTSCEEEEECCC
T ss_pred ceEEEEecCCeEEEEEcCC
Confidence 5899999999999999853
No 137
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=79.40 E-value=0.63 Score=35.41 Aligned_cols=19 Identities=11% Similarity=0.331 Sum_probs=16.7
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 133 ~~l~sgs~dg~i~vwd~~~ 151 (464)
T 3v7d_B 133 NYVITGADDKMIRVYDSIN 151 (464)
T ss_dssp TEEEEEETTSCEEEEETTT
T ss_pred CEEEEEcCCCcEEEEECCC
Confidence 4799999999999999843
No 138
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=79.09 E-value=0.69 Score=35.33 Aligned_cols=19 Identities=26% Similarity=0.429 Sum_probs=15.8
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 269 ~~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 269 QSVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp SEEEEEETTSEEEEEEC--
T ss_pred CEEEEEeCCCEEEEEECCC
Confidence 4689999999999999854
No 139
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=79.03 E-value=0.68 Score=34.27 Aligned_cols=19 Identities=26% Similarity=0.471 Sum_probs=17.1
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||.+..
T Consensus 87 ~~l~s~~~dg~i~iwd~~~ 105 (383)
T 3ei3_B 87 TTVAVGSKGGDIILWDYDV 105 (383)
T ss_dssp TEEEEEEBTSCEEEEETTS
T ss_pred CEEEEEcCCCeEEEEeCCC
Confidence 5899999999999999953
No 140
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=79.02 E-value=0.71 Score=34.82 Aligned_cols=20 Identities=10% Similarity=0.110 Sum_probs=17.7
Q ss_pred hhhheecccceeEeeecCCc
Q 032278 9 TFLVYGRKQKSVNIWFNDMP 28 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~~ 28 (144)
.+|||||.|++|+||++...
T Consensus 341 ~~l~s~~~d~~i~~wd~~~~ 360 (437)
T 3gre_A 341 KILLTDEATSSIVMFSLNEL 360 (437)
T ss_dssp EEEEEEGGGTEEEEEETTCG
T ss_pred eEEEecCCCCeEEEEECCCc
Confidence 57999999999999999653
No 141
>1dxs_A P53-like transcription factor; P73 SAM-like domain, gene regulation, P53 P63 homologue, sterIle alpha motif, tumour supressor; 2.54A {Homo sapiens} SCOP: a.60.1.2 PDB: 1cok_A
Probab=78.95 E-value=1 Score=31.98 Aligned_cols=44 Identities=11% Similarity=0.221 Sum_probs=32.8
Q ss_pred HHHHHHHhcCcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccch
Q 032278 38 DVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGD 89 (144)
Q Consensus 38 DVa~WLeeiGL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd 89 (144)
-|+.||..+|++.|-+.|+++++.- +.+|-.+| ++++.. ||+|+
T Consensus 8 Sv~s~Lt~LGc~~~Id~F~~qgl~~--i~qL~~~~----ledL~~--mkIpe 51 (80)
T 1dxs_A 8 SLVSFLTGLGCPNCIEYFTSQGLQS--IYHLQNLT----IEDLGA--LKIPE 51 (80)
T ss_dssp CHHHHHHHTTCTTSHHHHHTTTCCC--HHHHHTCC----HHHHHH--TTCCT
T ss_pred cHHHHHHhcCchHHHHHHHHcCccc--chhhccCC----HHHHHh--CCCCH
Confidence 4899999999999999999999863 33333333 445565 88884
No 142
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=78.60 E-value=0.75 Score=34.10 Aligned_cols=19 Identities=16% Similarity=0.308 Sum_probs=16.8
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 152 ~~l~s~s~d~~i~iwd~~~ 170 (420)
T 3vl1_A 152 EALISSSQDMQLKIWSVKD 170 (420)
T ss_dssp SEEEEEETTSEEEEEETTT
T ss_pred CEEEEEeCCCeEEEEeCCC
Confidence 4799999999999999954
No 143
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=78.47 E-value=0.71 Score=33.44 Aligned_cols=19 Identities=5% Similarity=0.228 Sum_probs=17.0
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 57 ~~l~~~~~dg~i~iw~~~~ 75 (408)
T 4a11_B 57 RYMLSGGSDGVIVLYDLEN 75 (408)
T ss_dssp CEEEEEETTSCEEEEECCC
T ss_pred CEEEEEcCCCeEEEEECCC
Confidence 5799999999999999954
No 144
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=78.33 E-value=0.8 Score=34.15 Aligned_cols=20 Identities=5% Similarity=0.159 Sum_probs=17.2
Q ss_pred hhhheecccceeEeeecCCc
Q 032278 9 TFLVYGRKQKSVNIWFNDMP 28 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~~ 28 (144)
.+|||||.|++|+||.+...
T Consensus 355 ~~l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 355 SVVMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp SEEEEECSTTEEEEEETTTC
T ss_pred CEEEEeccCCEEEEEEcCCC
Confidence 36899999999999999653
No 145
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=78.28 E-value=0.85 Score=33.51 Aligned_cols=21 Identities=0% Similarity=-0.034 Sum_probs=18.2
Q ss_pred hhhheecccceeEeeecCCcc
Q 032278 9 TFLVYGRKQKSVNIWFNDMPH 29 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~~l 29 (144)
.+|||||.|++|+||++....
T Consensus 319 ~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 319 DLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp TEEEECCSSSEEEEEESCCCC
T ss_pred CEEEEEecCCcEEEEEccCCC
Confidence 579999999999999996643
No 146
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=77.59 E-value=0.9 Score=32.36 Aligned_cols=20 Identities=15% Similarity=0.411 Sum_probs=17.7
Q ss_pred hhhhheecccceeEeeecCC
Q 032278 8 LTFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 8 ~~~LATGSmDKsV~IWql~~ 27 (144)
-.+||+|+.|++|+||++..
T Consensus 299 ~~~l~~~~~dg~i~vwd~~~ 318 (366)
T 3k26_A 299 QKMLALGNQVGKLYVWDLEV 318 (366)
T ss_dssp SSEEEEECTTSCEEEEECCS
T ss_pred CcEEEEEecCCcEEEEECCC
Confidence 35899999999999999965
No 147
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=77.37 E-value=0.86 Score=32.45 Aligned_cols=18 Identities=6% Similarity=0.357 Sum_probs=16.6
Q ss_pred hhheecccceeEeeecCC
Q 032278 10 FLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 10 ~LATGSmDKsV~IWql~~ 27 (144)
+|||||.|++|+||++..
T Consensus 274 ~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 274 LFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp EEEEEETTSEEEEEEEEC
T ss_pred EEEEEeCCCcEEEeecCC
Confidence 799999999999999964
No 148
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=77.13 E-value=0.83 Score=32.54 Aligned_cols=19 Identities=16% Similarity=0.391 Sum_probs=17.0
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 129 ~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 129 NLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TEEEEEETTSCEEEEETTT
T ss_pred CEEEEEeCCCeEEEEEeec
Confidence 5799999999999999954
No 149
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=76.95 E-value=0.82 Score=35.62 Aligned_cols=17 Identities=18% Similarity=0.464 Sum_probs=15.7
Q ss_pred hhhheecccceeEeeec
Q 032278 9 TFLVYGRKQKSVNIWFN 25 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql 25 (144)
.+|||||.|++|+||+.
T Consensus 29 ~~las~~~d~~v~iWd~ 45 (577)
T 2ymu_A 29 QTIASASDDKTVKLWNR 45 (577)
T ss_dssp SCEEEEETTSEEEEECT
T ss_pred CEEEEEeCCCEEEEEEC
Confidence 47999999999999986
No 150
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=76.65 E-value=0.91 Score=33.65 Aligned_cols=19 Identities=11% Similarity=0.048 Sum_probs=17.0
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||.+..
T Consensus 347 ~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 347 ALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp EEEEEETTTEEEEEEEECC
T ss_pred CEEEEecCCccEEEEeccC
Confidence 4799999999999999855
No 151
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=76.54 E-value=0.94 Score=32.87 Aligned_cols=16 Identities=25% Similarity=0.345 Sum_probs=15.6
Q ss_pred hhheecccceeEeeec
Q 032278 10 FLVYGRKQKSVNIWFN 25 (144)
Q Consensus 10 ~LATGSmDKsV~IWql 25 (144)
+||||+.|++|+||++
T Consensus 60 ~l~~~~~dg~i~iw~~ 75 (425)
T 1r5m_A 60 ILAYGEKNSVARLARI 75 (425)
T ss_dssp EEEEEETBTEEEEEEE
T ss_pred EEEEecCCceEEEEEE
Confidence 8999999999999999
No 152
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=76.23 E-value=0.88 Score=34.90 Aligned_cols=20 Identities=15% Similarity=0.137 Sum_probs=14.3
Q ss_pred hhheecccceeEeeecCCcc
Q 032278 10 FLVYGRKQKSVNIWFNDMPH 29 (144)
Q Consensus 10 ~LATGSmDKsV~IWql~~~l 29 (144)
+|||||.|++|+||++....
T Consensus 397 ~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 397 QIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp CEEECCSSSEEEEEC-----
T ss_pred EEEEEeCCCEEEEEECCCCC
Confidence 58999999999999998754
No 153
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=76.19 E-value=0.89 Score=34.59 Aligned_cols=18 Identities=28% Similarity=0.573 Sum_probs=16.4
Q ss_pred hhheecccceeEeeecCC
Q 032278 10 FLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 10 ~LATGSmDKsV~IWql~~ 27 (144)
+|||||.|++|+||.+..
T Consensus 175 ~l~s~s~dg~i~vwd~~~ 192 (464)
T 3v7d_B 175 ILVSGSTDRTVRVWDIKK 192 (464)
T ss_dssp EEEEEETTSCEEEEETTT
T ss_pred EEEEEeCCCCEEEEECCC
Confidence 799999999999999854
No 154
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=76.09 E-value=0.98 Score=32.20 Aligned_cols=18 Identities=17% Similarity=0.254 Sum_probs=16.3
Q ss_pred hhhheecccceeEeeecC
Q 032278 9 TFLVYGRKQKSVNIWFND 26 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~ 26 (144)
.+|||||.|++|+||.+.
T Consensus 24 ~~l~~~~~d~~v~iw~~~ 41 (342)
T 1yfq_A 24 SLLLITSWDGSLTVYKFD 41 (342)
T ss_dssp TEEEEEETTSEEEEEEEE
T ss_pred CEEEEEcCCCeEEEEEeC
Confidence 578999999999999984
No 155
>3lm3_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.44A {Parabacteroides distasonis}
Probab=76.02 E-value=0.2 Score=44.41 Aligned_cols=67 Identities=21% Similarity=0.378 Sum_probs=52.7
Q ss_pred CCcccccCCChhHHHHHHHhcCcchHHHHhhHcCcChhhhccCc-------ccchHHHHHHHhHhhhccchHHHH
Q 032278 26 DMPHALTLLSFQDVGLWLEEINLGGYRQIFKENGVNGEYLEGMS-------MFTTEQILRFIRRCHMKWGDFITL 93 (144)
Q Consensus 26 ~~~l~~~~WS~EDVa~WLeeiGL~qYre~Fk~NnIdG~eLi~Lt-------k~T~e~il~~i~r~~~k~gd~itl 93 (144)
+..+++..|-.|+ .+|=.-.|...++++|..|+=||+--=.|+ +-...||++|+-+|+-|+||-|++
T Consensus 35 EvsRdvkL~~rDE-~~wHtl~gVr~~reAfa~~~Pn~rlTWa~t~~aled~rp~yrqIr~Yv~~c~~kyGDEV~~ 108 (449)
T 3lm3_A 35 EVSRDVKLHPRDE-VDWHTLEGVRALREAFATNNPNGRLTWGFTMNALEDGRKNYREIRDYVVECQKKYGDEVTY 108 (449)
T ss_dssp BSSSSCBSSCCCC-GGGCCHHHHHHHHHHHHTTCTTCCCEEEECHHHHHCCSHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred eeecccccccccc-chhhHHHHHHHHHHHHHhcCCCceEEEEEEEeecccCChhHHHHHHHHHHHHHHhCCceee
Confidence 4567777786555 468888899999999999999998543333 234569999999999999998875
No 156
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=75.69 E-value=0.95 Score=33.15 Aligned_cols=18 Identities=11% Similarity=0.128 Sum_probs=16.2
Q ss_pred hhhheecccceeEeeecC
Q 032278 9 TFLVYGRKQKSVNIWFND 26 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~ 26 (144)
.+|||||.|++|+||++.
T Consensus 159 ~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 159 VLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp SEEEEEESSSCEEEEEEC
T ss_pred CEEEEEeCCCEEEEEEEE
Confidence 479999999999999984
No 157
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=75.18 E-value=1 Score=37.23 Aligned_cols=19 Identities=16% Similarity=0.338 Sum_probs=16.7
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 443 ~~l~sgs~Dg~v~vwd~~~ 461 (694)
T 3dm0_A 443 QFALSGSWDGELRLWDLAA 461 (694)
T ss_dssp SEEEEEETTSEEEEEETTT
T ss_pred CEEEEEeCCCcEEEEECCC
Confidence 4799999999999999843
No 158
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=75.05 E-value=0.97 Score=34.39 Aligned_cols=19 Identities=37% Similarity=0.392 Sum_probs=16.7
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||.+..
T Consensus 152 ~~l~sgs~dg~v~iwd~~~ 170 (357)
T 4g56_B 152 TQAVSGGKDFSVKVWDLSQ 170 (357)
T ss_dssp SEEEEEETTSCEEEEETTT
T ss_pred CEEEEEeCCCeEEEEECCC
Confidence 4789999999999999843
No 159
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=75.01 E-value=1.1 Score=33.07 Aligned_cols=18 Identities=11% Similarity=0.274 Sum_probs=16.5
Q ss_pred hhheecccceeEeeecCC
Q 032278 10 FLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 10 ~LATGSmDKsV~IWql~~ 27 (144)
+|||||.|++|+||++..
T Consensus 219 ~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 219 LMATSSVDATVKLWDLRN 236 (383)
T ss_dssp EEEEEETTSEEEEEEGGG
T ss_pred EEEEEeCCCEEEEEeCCC
Confidence 799999999999999954
No 160
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=75.01 E-value=1.1 Score=32.04 Aligned_cols=20 Identities=15% Similarity=0.270 Sum_probs=17.4
Q ss_pred hhhheecccceeEeeecCCc
Q 032278 9 TFLVYGRKQKSVNIWFNDMP 28 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~~ 28 (144)
.+|||||.|++|+||++...
T Consensus 264 ~~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 264 KFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp CCEEEEETTSCEEEEETTTT
T ss_pred CEEEEecCCceEEEEcCccH
Confidence 46999999999999999653
No 161
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=74.97 E-value=1 Score=31.63 Aligned_cols=19 Identities=26% Similarity=0.471 Sum_probs=16.6
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|+||+.|++|+||.+..
T Consensus 163 ~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 163 RHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp SEEEEEETTSCEEEEESSC
T ss_pred CEEEEEecCcceeEEECCC
Confidence 4789999999999999843
No 162
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=74.32 E-value=1.2 Score=31.65 Aligned_cols=19 Identities=21% Similarity=0.434 Sum_probs=16.7
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||.+..
T Consensus 87 ~~l~s~~~dg~i~iwd~~~ 105 (369)
T 3zwl_B 87 KYCVTGSADYSIKLWDVSN 105 (369)
T ss_dssp SEEEEEETTTEEEEEETTT
T ss_pred CEEEEEeCCCeEEEEECCC
Confidence 4789999999999999844
No 163
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=73.95 E-value=1.2 Score=34.07 Aligned_cols=20 Identities=15% Similarity=0.409 Sum_probs=17.4
Q ss_pred hhhheecccceeEeeecCCc
Q 032278 9 TFLVYGRKQKSVNIWFNDMP 28 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~~ 28 (144)
.+|||||.|++|+||++...
T Consensus 373 ~~l~s~~~dg~v~iwd~~~~ 392 (445)
T 2ovr_B 373 NFVITSSDDGTVKLWDLKTG 392 (445)
T ss_dssp SEEEEEETTSEEEEEETTTC
T ss_pred CEEEEEeCCCeEEEEECCCC
Confidence 47999999999999998653
No 164
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=73.88 E-value=1.1 Score=34.23 Aligned_cols=19 Identities=16% Similarity=0.440 Sum_probs=15.4
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||.+..
T Consensus 130 ~~l~sg~~dg~i~vwd~~~ 148 (445)
T 2ovr_B 130 NRIVSGSDDNTLKVWSAVT 148 (445)
T ss_dssp TEEEEEETTSCEEEEETTT
T ss_pred CEEEEEECCCcEEEEECCC
Confidence 4688999999999998743
No 165
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=73.30 E-value=1.1 Score=34.27 Aligned_cols=19 Identities=16% Similarity=0.506 Sum_probs=15.4
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 184 ~~l~sg~~dg~i~vwd~~~ 202 (435)
T 1p22_A 184 RVIITGSSDSTVRVWDVNT 202 (435)
T ss_dssp SEEEEEETTSCEEEEESSS
T ss_pred CEEEEEcCCCeEEEEECCC
Confidence 4688999999999998844
No 166
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=73.30 E-value=1.3 Score=33.61 Aligned_cols=21 Identities=10% Similarity=0.165 Sum_probs=17.4
Q ss_pred hhhheecccceeEeeecCCcc
Q 032278 9 TFLVYGRKQKSVNIWFNDMPH 29 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~~l 29 (144)
.+|||||.|++|+||++....
T Consensus 362 ~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 362 RILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp SEEEEECTTSEEEEEECCC--
T ss_pred CEEEEEeCCCcEEEEECCCCc
Confidence 479999999999999998765
No 167
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=73.04 E-value=1.2 Score=31.80 Aligned_cols=19 Identities=21% Similarity=0.457 Sum_probs=17.3
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+||+|+.|++|+||++..
T Consensus 81 ~~l~~~~~dg~i~iwd~~~ 99 (357)
T 3i2n_A 81 RYLATGDFGGNLHIWNLEA 99 (357)
T ss_dssp CCEEEEETTSCEEEECTTS
T ss_pred ceEEEecCCCeEEEEeCCC
Confidence 6899999999999999964
No 168
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=72.99 E-value=1.3 Score=32.40 Aligned_cols=20 Identities=10% Similarity=0.096 Sum_probs=17.4
Q ss_pred hhhheecccceeEeeecCCc
Q 032278 9 TFLVYGRKQKSVNIWFNDMP 28 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~~ 28 (144)
.+|||||.|++|+||.+...
T Consensus 304 ~~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 304 ETLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp SEEEEEETTSEEEEEETTTT
T ss_pred CEEEEEeCCCeEEEEEcCCC
Confidence 47999999999999999653
No 169
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=72.84 E-value=1.3 Score=34.27 Aligned_cols=18 Identities=28% Similarity=0.462 Sum_probs=16.3
Q ss_pred hhheecccceeEeeecCC
Q 032278 10 FLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 10 ~LATGSmDKsV~IWql~~ 27 (144)
+|||||+|++|+||.+..
T Consensus 292 ~l~tg~~dg~v~vwd~~~ 309 (430)
T 2xyi_A 292 ILATGSADKTVALWDLRN 309 (430)
T ss_dssp EEEEEETTSEEEEEETTC
T ss_pred EEEEEeCCCeEEEEeCCC
Confidence 689999999999999954
No 170
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=72.60 E-value=1.2 Score=34.63 Aligned_cols=18 Identities=17% Similarity=0.479 Sum_probs=16.0
Q ss_pred hhhheecccceeEeeecC
Q 032278 9 TFLVYGRKQKSVNIWFND 26 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~ 26 (144)
.+|||||.|++|+||...
T Consensus 521 ~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 521 QTIASASDDKTVKLWNRN 538 (577)
T ss_dssp SCEEEEETTSEEEEECTT
T ss_pred CEEEEEECcCEEEEEeCC
Confidence 479999999999999863
No 171
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=72.42 E-value=1.4 Score=34.13 Aligned_cols=21 Identities=10% Similarity=0.131 Sum_probs=17.8
Q ss_pred hhhheecccceeEeeecCCcc
Q 032278 9 TFLVYGRKQKSVNIWFNDMPH 29 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~~l 29 (144)
.+|||||.|++|+||++....
T Consensus 253 ~~l~s~~~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 253 YLLLSAGGDDKIFAWDWKTGK 273 (450)
T ss_dssp TEEEEEESSSEEEEEETTTCC
T ss_pred CEEEEEeCCCeEEEEECCCCc
Confidence 478999999999999996533
No 172
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=72.27 E-value=1.3 Score=31.88 Aligned_cols=19 Identities=11% Similarity=0.195 Sum_probs=16.6
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 65 ~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 65 NRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp TEEEEEETTSCEEEEEEET
T ss_pred CEEEEEcCCCeEEEEECCC
Confidence 4789999999999999843
No 173
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=72.22 E-value=1.3 Score=33.37 Aligned_cols=19 Identities=11% Similarity=0.214 Sum_probs=17.0
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||.+..
T Consensus 145 ~~l~s~~~dg~i~iwd~~~ 163 (402)
T 2aq5_A 145 NVLLSAGCDNVILVWDVGT 163 (402)
T ss_dssp TEEEEEETTSCEEEEETTT
T ss_pred CEEEEEcCCCEEEEEECCC
Confidence 5799999999999999854
No 174
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=72.06 E-value=1.3 Score=32.44 Aligned_cols=19 Identities=16% Similarity=0.450 Sum_probs=16.8
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 276 ~~l~s~~~dg~v~~wd~~~ 294 (416)
T 2pm9_A 276 HLLLSSGRDNTVLLWNPES 294 (416)
T ss_dssp SCEEEEESSSEEEEECSSS
T ss_pred CeEEEEeCCCCEEEeeCCC
Confidence 5799999999999999843
No 175
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=71.78 E-value=1.3 Score=35.57 Aligned_cols=19 Identities=5% Similarity=-0.003 Sum_probs=16.8
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 163 ~~las~s~Dg~v~iwD~~~ 181 (434)
T 2oit_A 163 SMVAVCLADGSIAVLQVTE 181 (434)
T ss_dssp TEEEEEETTSCEEEEEESS
T ss_pred CEEEEEECCCeEEEEEcCC
Confidence 5799999999999999854
No 176
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=70.60 E-value=1.5 Score=33.28 Aligned_cols=19 Identities=26% Similarity=0.373 Sum_probs=16.8
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 230 ~~l~s~~~d~~v~iwd~~~ 248 (401)
T 4aez_A 230 LQLASGGNDNVVQIWDARS 248 (401)
T ss_dssp SEEEEEETTSCEEEEETTC
T ss_pred CEEEEEeCCCeEEEccCCC
Confidence 4799999999999999954
No 177
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=70.51 E-value=1.6 Score=33.87 Aligned_cols=18 Identities=22% Similarity=0.427 Sum_probs=16.6
Q ss_pred hhhheecccceeEeeecC
Q 032278 9 TFLVYGRKQKSVNIWFND 26 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~ 26 (144)
.+|||||.|++|+||++.
T Consensus 79 ~~l~s~~~dg~v~vw~~~ 96 (615)
T 1pgu_A 79 QYLCSGDESGKVIVWGWT 96 (615)
T ss_dssp CEEEEEETTSEEEEEEEE
T ss_pred CEEEEecCCCEEEEEeCC
Confidence 579999999999999994
No 178
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=70.17 E-value=1.7 Score=31.19 Aligned_cols=19 Identities=11% Similarity=0.058 Sum_probs=16.7
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||.+..
T Consensus 215 ~~l~~~~~d~~i~i~d~~~ 233 (372)
T 1k8k_C 215 SRVAWVSHDSTVCLADADK 233 (372)
T ss_dssp SEEEEEETTTEEEEEEGGG
T ss_pred CEEEEEeCCCEEEEEECCC
Confidence 4799999999999999943
No 179
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=69.83 E-value=1.5 Score=33.86 Aligned_cols=20 Identities=10% Similarity=0.235 Sum_probs=17.5
Q ss_pred hhhheecccceeEeeecCCc
Q 032278 9 TFLVYGRKQKSVNIWFNDMP 28 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~~ 28 (144)
.+|||||.|++|+||++...
T Consensus 211 ~~l~s~~~d~~i~vwd~~~~ 230 (450)
T 2vdu_B 211 QFIITSDRDEHIKISHYPQC 230 (450)
T ss_dssp EEEEEEETTSCEEEEEESCT
T ss_pred cEEEEEcCCCcEEEEECCCC
Confidence 48999999999999999653
No 180
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=69.10 E-value=1.6 Score=33.77 Aligned_cols=21 Identities=14% Similarity=0.238 Sum_probs=18.2
Q ss_pred hhhhheecccceeEeeecCCc
Q 032278 8 LTFLVYGRKQKSVNIWFNDMP 28 (144)
Q Consensus 8 ~~~LATGSmDKsV~IWql~~~ 28 (144)
-.+|||||.|++|+||.+...
T Consensus 553 ~~~l~~~~~dg~i~iw~~~~~ 573 (615)
T 1pgu_A 553 EDLVATGSLDTNIFIYSVKRP 573 (615)
T ss_dssp CCEEEEEETTSCEEEEESSCT
T ss_pred CCEEEEEcCCCcEEEEECCCC
Confidence 468999999999999999653
No 181
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=66.61 E-value=2.1 Score=29.78 Aligned_cols=18 Identities=22% Similarity=0.436 Sum_probs=16.0
Q ss_pred hhheecccceeEeeecCC
Q 032278 10 FLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 10 ~LATGSmDKsV~IWql~~ 27 (144)
.||+||.|++|+||.+..
T Consensus 238 ~l~~~~~dg~v~iwd~~~ 255 (313)
T 3odt_A 238 DIVSCGEDRTVRIWSKEN 255 (313)
T ss_dssp CEEEEETTSEEEEECTTT
T ss_pred CEEEEecCCEEEEEECCC
Confidence 589999999999999844
No 182
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=66.22 E-value=2.3 Score=29.85 Aligned_cols=19 Identities=21% Similarity=0.410 Sum_probs=16.8
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+||+|+.|++|+||++..
T Consensus 278 ~~l~~~~~dg~i~~~~~~~ 296 (337)
T 1gxr_A 278 KWFVSTGKDNLLNAWRTPY 296 (337)
T ss_dssp SEEEEEETTSEEEEEETTT
T ss_pred CEEEEecCCCcEEEEECCC
Confidence 4689999999999999855
No 183
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=65.84 E-value=2.1 Score=38.06 Aligned_cols=17 Identities=18% Similarity=0.200 Sum_probs=16.1
Q ss_pred hhhheecccceeEeeec
Q 032278 9 TFLVYGRKQKSVNIWFN 25 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql 25 (144)
.+||+||+|++|++|++
T Consensus 643 ~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 643 ILMVCGTDMGEVITYKI 659 (902)
T ss_dssp EEEEEEETTSEEEEEEE
T ss_pred eEEEEEecCCcEEEEEE
Confidence 58999999999999998
No 184
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=65.44 E-value=2 Score=33.24 Aligned_cols=19 Identities=16% Similarity=0.361 Sum_probs=17.0
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||.+..
T Consensus 335 ~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 335 TILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp TEEEEEETTSCCEEEEGGG
T ss_pred CEEEEEeCCCcEEEEeCCC
Confidence 4699999999999999965
No 185
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=63.93 E-value=2.4 Score=30.69 Aligned_cols=19 Identities=11% Similarity=-0.040 Sum_probs=16.8
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+||+|+.|++|+||++..
T Consensus 343 ~~l~~~~~dg~i~i~~~~~ 361 (425)
T 1r5m_A 343 QKYAVAFMDGQVNVYDLKK 361 (425)
T ss_dssp SEEEEEETTSCEEEEECHH
T ss_pred CEEEEEECCCeEEEEECCC
Confidence 4799999999999999954
No 186
>3klb_A Putative flavoprotein; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: FMN; 1.75A {Bacteroides fragilis nctc 9343}
Probab=62.77 E-value=3.6 Score=29.36 Aligned_cols=15 Identities=33% Similarity=0.596 Sum_probs=13.5
Q ss_pred CChhHHHHHHHhcCc
Q 032278 34 LSFQDVGLWLEEINL 48 (144)
Q Consensus 34 WS~EDVa~WLeeiGL 48 (144)
=+.++|.+||+++||
T Consensus 148 ~~~~~v~~W~~~~~~ 162 (162)
T 3klb_A 148 ITRDLVTEWFEKIRL 162 (162)
T ss_dssp CCHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHhCC
Confidence 488999999999997
No 187
>3in6_A FMN-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, flavoprotein; HET: FMN; 2.12A {Syntrophomonas wolfei subsp}
Probab=61.62 E-value=1.7 Score=33.17 Aligned_cols=25 Identities=28% Similarity=0.182 Sum_probs=20.8
Q ss_pred Ccchhhh---hhhhheecccceeEeeec
Q 032278 1 MKRLFDA---LTFLVYGRKQKSVNIWFN 25 (144)
Q Consensus 1 ~~~~~~~---~~~LATGSmDKsV~IWql 25 (144)
||.||.+ +.+|||.|.|+.+|+=-+
T Consensus 22 ~r~l~~~~v~~~~LATAdkdG~PNVa~~ 49 (148)
T 3in6_A 22 ARSLINANYISTTLSTVDRNYEVNIAVI 49 (148)
T ss_dssp HHHHHHHTCSSEEEEEECTTCCEEEEEC
T ss_pred HHHHHhCCcceEEEEEcCCCCCccEEEE
Confidence 4567766 789999999999998766
No 188
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=60.46 E-value=6.8 Score=27.37 Aligned_cols=51 Identities=14% Similarity=0.195 Sum_probs=35.6
Q ss_pred cCCChhHHHHHHHhcCcchHHHHhhHcCcChhhhc-cCcccchHHHHHHHhH
Q 032278 32 TLLSFQDVGLWLEEINLGGYRQIFKENGVNGEYLE-GMSMFTTEQILRFIRR 82 (144)
Q Consensus 32 ~~WS~EDVa~WLeeiGL~qYre~Fk~NnIdG~eLi-~Ltk~T~e~il~~i~r 82 (144)
..+|.+++..|++..|++.+++.|..++-.=++|. .-...|.+++++.+-.
T Consensus 39 ~~~t~~eL~~~l~~~g~~~~~~l~n~~~~~~k~l~l~~~~ls~~~~~~lm~~ 90 (119)
T 3f0i_A 39 TSPSVEELKRLYQQLGLNEVRAMMRCKEELYKELNLGDSQLSDDALFAAMAE 90 (119)
T ss_dssp HCCCHHHHHHHHHHHTCSSGGGGBCTTSHHHHHTTTTCTTCCHHHHHHHHHH
T ss_pred CcCcHHHHHHHHHHcCCccHHHHhcCCCchhhhcCcccccCCHHHHHHHHHh
Confidence 45999999999999999877777766654444431 1123478888877654
No 189
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=60.19 E-value=3.4 Score=28.94 Aligned_cols=19 Identities=26% Similarity=0.207 Sum_probs=16.7
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+||+|+.|++|++|.+..
T Consensus 196 ~~l~~~~~dg~i~~~d~~~ 214 (337)
T 1gxr_A 196 TKLWTGGLDNTVRSWDLRE 214 (337)
T ss_dssp SEEEEEETTSEEEEEETTT
T ss_pred CEEEEEecCCcEEEEECCC
Confidence 4789999999999999854
No 190
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=59.97 E-value=2.7 Score=34.31 Aligned_cols=18 Identities=17% Similarity=0.364 Sum_probs=16.2
Q ss_pred hhhheecccceeEeeecC
Q 032278 9 TFLVYGRKQKSVNIWFND 26 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~ 26 (144)
.+||+|+.|++|+||.+.
T Consensus 26 ~~la~~~~~g~v~iwd~~ 43 (814)
T 3mkq_A 26 PWVLTTLYSGRVEIWNYE 43 (814)
T ss_dssp SEEEEEETTSEEEEEETT
T ss_pred CEEEEEeCCCEEEEEECC
Confidence 579999999999999983
No 191
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=57.18 E-value=3.8 Score=34.89 Aligned_cols=18 Identities=17% Similarity=0.200 Sum_probs=16.1
Q ss_pred hhhheecccceeEeeecC
Q 032278 9 TFLVYGRKQKSVNIWFND 26 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~ 26 (144)
.+|||||.|++|+||.+.
T Consensus 22 ~~latg~~dg~I~vwd~~ 39 (753)
T 3jro_A 22 KRLATCSSDKTIKIFEVE 39 (753)
T ss_dssp CCEEEEETTTEEEEEEEE
T ss_pred CeEEEEECCCcEEEEecC
Confidence 479999999999999984
No 192
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=53.58 E-value=4.3 Score=34.56 Aligned_cols=18 Identities=28% Similarity=0.375 Sum_probs=16.3
Q ss_pred hhhheecccceeEeeecC
Q 032278 9 TFLVYGRKQKSVNIWFND 26 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~ 26 (144)
.+|||||.|++|+||++.
T Consensus 68 ~~l~s~s~Dg~I~vwd~~ 85 (753)
T 3jro_A 68 TILASCSYDGKVLIWKEE 85 (753)
T ss_dssp SEEEEEETTSCEEEEEEE
T ss_pred CEEEEEeCCCeEEEEECC
Confidence 579999999999999984
No 193
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=52.76 E-value=13 Score=25.94 Aligned_cols=51 Identities=18% Similarity=0.193 Sum_probs=35.5
Q ss_pred cCCChhHHHHHHHhcCcchHHHHhhHcCcChhhhc-cCcccchHHHHHHHhH
Q 032278 32 TLLSFQDVGLWLEEINLGGYRQIFKENGVNGEYLE-GMSMFTTEQILRFIRR 82 (144)
Q Consensus 32 ~~WS~EDVa~WLeeiGL~qYre~Fk~NnIdG~eLi-~Ltk~T~e~il~~i~r 82 (144)
..++.+++..|+...|+.+.++.|..++-.=++|. .-...|.+++++.+-.
T Consensus 40 ~~~~~~eL~~~l~~~g~~~~~~l~n~~~~~~k~l~l~~~~ls~~~~~~lm~~ 91 (121)
T 3rdw_A 40 TPPSVDKLKELLQQLGFSDARQLMRTKEDLYKTLNLDDRGLTQDQLLQAMAD 91 (121)
T ss_dssp SCCCHHHHHHHHHHTTCSSGGGGBCTTSHHHHHTTTTCTTCCHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHhcCCcCHHHHhcCCChhhhhcCcccccCCHHHHHHHHHh
Confidence 56999999999999998667777776654433332 1123478888887654
No 194
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii}
Probab=52.31 E-value=6.2 Score=28.59 Aligned_cols=22 Identities=18% Similarity=0.318 Sum_probs=17.0
Q ss_pred cccccCCChhHHHHHHHhcCcc
Q 032278 28 PHALTLLSFQDVGLWLEEINLG 49 (144)
Q Consensus 28 ~l~~~~WS~EDVa~WLeeiGL~ 49 (144)
...+..=+.++|.+||+++|+.
T Consensus 150 g~~~~~~~~~~i~~Wl~~~~~~ 171 (171)
T 4ici_A 150 GRLLNRTDEKAIRAWLDVIAVK 171 (171)
T ss_dssp CEECSSCCHHHHHHHHHHHTCC
T ss_pred CeEecCCCHHHHHHHHHHhCCC
Confidence 4555555788899999999974
No 195
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=50.71 E-value=5.5 Score=35.81 Aligned_cols=18 Identities=11% Similarity=0.191 Sum_probs=16.3
Q ss_pred hhheecccceeEeeecCC
Q 032278 10 FLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 10 ~LATGSmDKsV~IWql~~ 27 (144)
+||+||.|++|+||.+..
T Consensus 143 ~LAsgs~DGtVkIWd~~~ 160 (588)
T 2j04_A 143 SIVVGNEDGELQFFSIRK 160 (588)
T ss_dssp CEEEEETTSEEEEEECCC
T ss_pred EEEEEcCCCEEEEEECCC
Confidence 799999999999999854
No 196
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=50.70 E-value=6.1 Score=28.99 Aligned_cols=18 Identities=0% Similarity=-0.020 Sum_probs=15.9
Q ss_pred hhheecccceeEeeecCC
Q 032278 10 FLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 10 ~LATGSmDKsV~IWql~~ 27 (144)
++++||.|++|+||.+..
T Consensus 4 l~vs~~~d~~v~v~d~~~ 21 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTS 21 (391)
T ss_dssp EEEEETTTTEEEEEETTT
T ss_pred EEEEcCCCCEEEEEECCC
Confidence 689999999999999843
No 197
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=49.02 E-value=5.1 Score=32.04 Aligned_cols=18 Identities=6% Similarity=-0.108 Sum_probs=15.2
Q ss_pred hhhh----eecccceeEeeecC
Q 032278 9 TFLV----YGRKQKSVNIWFND 26 (144)
Q Consensus 9 ~~LA----TGSmDKsV~IWql~ 26 (144)
.+|| |||.|++|+||.+.
T Consensus 105 ~~lav~~~sgs~d~~v~iwd~~ 126 (434)
T 2oit_A 105 LTLSACMMSSEYGSIIAFFDVR 126 (434)
T ss_dssp CEEEEEEEETTTEEEEEEEEHH
T ss_pred CEEEEEEeccCCCceEEEEEcc
Confidence 3567 99999999999874
No 198
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=47.91 E-value=6.5 Score=34.30 Aligned_cols=19 Identities=21% Similarity=0.476 Sum_probs=16.8
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||++..
T Consensus 670 ~~l~s~~~d~~v~vwd~~~ 688 (1249)
T 3sfz_A 670 SYIATCSADKKVKIWDSAT 688 (1249)
T ss_dssp SEEEEEETTSEEEEEETTT
T ss_pred CEEEEEeCCCeEEEEECCC
Confidence 4799999999999999843
No 199
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=45.74 E-value=7.7 Score=33.84 Aligned_cols=19 Identities=11% Similarity=0.239 Sum_probs=16.7
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|++|++..
T Consensus 756 ~~l~s~s~dg~v~vwd~~~ 774 (1249)
T 3sfz_A 756 ELLASCSADGTLRLWDVRS 774 (1249)
T ss_dssp TEEEEEESSSEEEEEEGGG
T ss_pred CEEEEEECCCeEEEEeCCC
Confidence 4799999999999999843
No 200
>2p2u_A HOST-nuclease inhibitor protein GAM, putative; structural genomics, unknown function, PSI-2, protein structure initiative; 2.75A {Desulfovibrio vulgaris} SCOP: h.4.18.1
Probab=44.99 E-value=14 Score=27.96 Aligned_cols=43 Identities=14% Similarity=0.135 Sum_probs=29.3
Q ss_pred eecCCccc-ccCCChhHHHHHHHhcCcchHHHHhhHcCcChhhhcc
Q 032278 23 WFNDMPHA-LTLLSFQDVGLWLEEINLGGYRQIFKENGVNGEYLEG 67 (144)
Q Consensus 23 Wql~~~l~-~~~WS~EDVa~WLeeiGL~qYre~Fk~NnIdG~eLi~ 67 (144)
||...+.- ...|+.|.|-+||++.||.+|... .-.||=..|..
T Consensus 95 ~R~~~~~v~~~~~~~~~vle~Lk~~gl~~~Ir~--keevnK~al~~ 138 (171)
T 2p2u_A 95 FRLSTQIVQMSKITKDMTLERLRQFGISEGIRI--KEDVNKEAMQG 138 (171)
T ss_dssp CCCCCCCCCCTTCCHHHHHHHHHHTTCCTTCCC--CCCCCHHHHTT
T ss_pred EEeCCCccccccCCHHHHHHHHHHCCcHhheee--ccccCHHHHhc
Confidence 77766553 334899999999999999877542 23444444444
No 201
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=43.67 E-value=8.5 Score=34.61 Aligned_cols=19 Identities=21% Similarity=0.010 Sum_probs=16.2
Q ss_pred hheecccceeEeeecCCcc
Q 032278 11 LVYGRKQKSVNIWFNDMPH 29 (144)
Q Consensus 11 LATGSmDKsV~IWql~~~l 29 (144)
||+||+|++|++|.+..+.
T Consensus 195 Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 195 LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp EEEEETTCCEEEECCCSSS
T ss_pred EEEEeCCCeEEEEECCCCc
Confidence 7899999999999995543
No 202
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=42.96 E-value=27 Score=24.06 Aligned_cols=50 Identities=14% Similarity=0.182 Sum_probs=33.4
Q ss_pred cCCChhHHHHHHHhcCcchHHHHhhHcCcChhhhc-cCcccchHHHHHHHhH
Q 032278 32 TLLSFQDVGLWLEEINLGGYRQIFKENGVNGEYLE-GMSMFTTEQILRFIRR 82 (144)
Q Consensus 32 ~~WS~EDVa~WLeeiGL~qYre~Fk~NnIdG~eLi-~Ltk~T~e~il~~i~r 82 (144)
..++.+++.+|+...|++ +++.|..++-.=++|. .....|.+++++.+-.
T Consensus 35 ~~~~~~el~~~l~~~~~~-~~~l~n~~~~~~k~l~~~~~~ls~~~~~~~m~~ 85 (120)
T 3l78_A 35 SPLSRDELLKILSYTENG-TEDIISTRSKVFQKLDIDVDELSVSELINLISK 85 (120)
T ss_dssp SCCCHHHHHHHHHHCSST-HHHHBCTTCHHHHHTTCCGGGCCHHHHHHHHHH
T ss_pred CCCcHHHHHHHHhhcCCC-HHHhhcCCcHHHHHcCCCcccCCHHHHHHHHHh
Confidence 568999999999988875 6777766544433332 1123477888877654
No 203
>2hl7_A Cytochrome C-type biogenesis protein CCMH; three-helices bundle, oxidoreductase; HET: PG4; 1.70A {Pseudomonas aeruginosa}
Probab=42.58 E-value=8.3 Score=26.89 Aligned_cols=20 Identities=20% Similarity=0.569 Sum_probs=16.1
Q ss_pred ccchHHHHHHHhHhhhccchHHH
Q 032278 70 MFTTEQILRFIRRCHMKWGDFIT 92 (144)
Q Consensus 70 k~T~e~il~~i~r~~~k~gd~it 92 (144)
..|+++|+.|+-- .|||||.
T Consensus 59 G~sd~eI~~~~v~---RYG~fVl 78 (84)
T 2hl7_A 59 GKSDGEIVDYMVA---RYGDFVR 78 (84)
T ss_dssp TCCHHHHHHHHHH---HHTTTCE
T ss_pred CCCHHHHHHHHHH---hcCCeee
Confidence 4578999998865 7999984
No 204
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=42.27 E-value=5.3 Score=31.28 Aligned_cols=25 Identities=20% Similarity=0.411 Sum_probs=0.0
Q ss_pred hHHHHHHHhcCcchHHHHhhHcCcC
Q 032278 37 QDVGLWLEEINLGGYRQIFKENGVN 61 (144)
Q Consensus 37 EDVa~WLeeiGL~qYre~Fk~NnId 61 (144)
..+++|++.+.+++|++.|.+++++
T Consensus 340 ~~~~~w~~~~~~~~~~~~~~~~~~~ 364 (373)
T 2qol_A 340 RTTGDWLNGVWTAHCKEIFTGVEYS 364 (373)
T ss_dssp -------------------------
T ss_pred CCHHHHHHhccchHHHHHHHhcCCC
Confidence 4678999999999999999998875
No 205
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=41.56 E-value=9.9 Score=31.00 Aligned_cols=19 Identities=16% Similarity=0.511 Sum_probs=16.3
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.+|||||.|++|+||.+..
T Consensus 110 ~~l~~~~~dg~i~vw~~~~ 128 (814)
T 3mkq_A 110 PYVLSGSDDLTVKLWNWEN 128 (814)
T ss_dssp SEEEEEETTSEEEEEEGGG
T ss_pred CEEEEEcCCCEEEEEECCC
Confidence 3689999999999999843
No 206
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=41.31 E-value=21 Score=24.85 Aligned_cols=50 Identities=14% Similarity=0.276 Sum_probs=34.0
Q ss_pred cCCChhHHHHHHHhcCcchHHHHhhHcCcChhhhc---cCcccchHHHHHHHhH
Q 032278 32 TLLSFQDVGLWLEEINLGGYRQIFKENGVNGEYLE---GMSMFTTEQILRFIRR 82 (144)
Q Consensus 32 ~~WS~EDVa~WLeeiGL~qYre~Fk~NnIdG~eLi---~Ltk~T~e~il~~i~r 82 (144)
..+|.+++..|+...|++ +++.|..++-.=++|. .+...|.+++++.+-.
T Consensus 38 ~~~~~~eL~~~l~~~g~~-~~~l~n~~~~~~k~l~l~~~~~~ls~~~~~~lm~~ 90 (120)
T 3fz4_A 38 NPPAASLIRNWLENSGLE-LKKFFNTSGQSYRALGLKDKLHQLSLDEAANLLAS 90 (120)
T ss_dssp SCCCHHHHHHHHHHSCCC-GGGGBCTTSHHHHHTTHHHHGGGCCHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHcCCC-HHHHhCCCCcchhhcCcccccccCCHHHHHHHHHh
Confidence 579999999999999975 6777766554444432 1224477888776644
No 207
>2kw0_A CCMH protein; oxidoreductase, cytochrome C maturation; NMR {Escherichia coli}
Probab=40.66 E-value=9.3 Score=27.16 Aligned_cols=20 Identities=20% Similarity=0.607 Sum_probs=16.3
Q ss_pred ccchHHHHHHHhHhhhccchHHH
Q 032278 70 MFTTEQILRFIRRCHMKWGDFIT 92 (144)
Q Consensus 70 k~T~e~il~~i~r~~~k~gd~it 92 (144)
..|++||+.|+-. .|||||.
T Consensus 56 G~Sd~eI~~~mv~---RYGdfVl 75 (90)
T 2kw0_A 56 GKSKKEIVDYMVA---RYGNFVT 75 (90)
T ss_dssp TCCHHHHHHHHHH---HHTTTCB
T ss_pred CCCHHHHHHHHHH---hcCCeEE
Confidence 4578999998865 7999985
No 208
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=39.18 E-value=11 Score=27.95 Aligned_cols=19 Identities=11% Similarity=0.123 Sum_probs=16.7
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.++|||+.|++|++|.+..
T Consensus 182 ~~~~s~~~d~~v~~~d~~~ 200 (433)
T 3bws_A 182 ELWVSQMQANAVHVFDLKT 200 (433)
T ss_dssp EEEEEEGGGTEEEEEETTT
T ss_pred EEEEEECCCCEEEEEECCC
Confidence 5789999999999999854
No 209
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=36.78 E-value=24 Score=24.50 Aligned_cols=50 Identities=16% Similarity=0.314 Sum_probs=34.5
Q ss_pred cCCChhHHHHHHHhcCcchHHHHhhHcCcChhhhcc---CcccchHHHHHHHhH
Q 032278 32 TLLSFQDVGLWLEEINLGGYRQIFKENGVNGEYLEG---MSMFTTEQILRFIRR 82 (144)
Q Consensus 32 ~~WS~EDVa~WLeeiGL~qYre~Fk~NnIdG~eLi~---Ltk~T~e~il~~i~r 82 (144)
..++.+++..|+...|++ +++.|..++-.=++|.- +...|.++++..+-.
T Consensus 39 ~~~~~~eL~~~l~~~g~~-~~~l~n~~~~~~k~l~l~~k~~~ls~~~~~~lm~~ 91 (120)
T 3gkx_A 39 DNPTVEELKAWIPLSGLP-VKKFFNTSGVVYKELKLSSKLPTMTEEEQIALLAT 91 (120)
T ss_dssp TCCCHHHHHHHHHHHTSC-GGGGBCTTSHHHHHTTHHHHGGGSCHHHHHHHHTT
T ss_pred CcCCHHHHHHHHHHcCCC-HHHeEeCCCchhhhcCcchhcccCCHHHHHHHHHh
Confidence 568999999999999975 77777766554444321 234477888776643
No 210
>3qk9_A Mitochondrial import inner membrane translocase S TIM44; mitochondrion, protein transport; 3.10A {Saccharomyces cerevisiae} PDB: 2fxt_A
Probab=35.32 E-value=10 Score=30.01 Aligned_cols=85 Identities=22% Similarity=0.321 Sum_probs=49.3
Q ss_pred hHHHHhhHcCcChhhhccCcc----cchHHHHHHHhHhhhccc-------------------------hHHHHHHHH--H
Q 032278 50 GYRQIFKENGVNGEYLEGMSM----FTTEQILRFIRRCHMKWG-------------------------DFITLCKEL--R 98 (144)
Q Consensus 50 qYre~Fk~NnIdG~eLi~Ltk----~T~e~il~~i~r~~~k~g-------------------------d~itl~~el--~ 98 (144)
+=-+-||+||-=|+.+..|-. +|+-|+++-+|.+-=+.| +|+.-|+|- .
T Consensus 11 ~~w~~fk~~~~~~~~~~~~k~~~~~es~np~i~~~r~itd~v~~~f~~te~a~~l~~Ik~~DPsF~~~~Fl~~a~~ai~p 90 (222)
T 3qk9_A 11 KKVEDFKEKTVVGRSIQSLKNKLWDESENPLIVVMRKITNKVGGFFAETESSRVYSQFKLMDPTFSNESFTRHLREYIVP 90 (222)
T ss_dssp ----------------CHHHHHHHHHCCCHHHHHHHHHCC---------CCHHHHTTCC-----CCHHHHHHHHHHTHHH
T ss_pred HHHHHHhhcCHHHHHHHHHHhhhcccccCHHHHHHHHHHHhcccccCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 334679999999999887654 478889888888744433 577777774 3
Q ss_pred HHHHHHhhCcccccCCCCCCcchhhhhhhhhhhccc
Q 032278 99 RIKVACLKGEQKVRRPWWAPSCLSVVFVKVAKRNRQ 134 (144)
Q Consensus 99 ~~kv~~~~~~~~~~~~~w~p~~~s~v~~~~~~~~~~ 134 (144)
.|=-|..+|....-++|=.|..+++.-.-+..+..|
T Consensus 91 ~Il~Af~~GD~~~Lk~llse~~y~~f~~~i~~r~~~ 126 (222)
T 3qk9_A 91 EILEAYVKGDVKVLKKWFSEAPFNVYAAQQKIFKEQ 126 (222)
T ss_dssp HHHHHHHHTCHHHHHHHBCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHhhcCHHHHHHHHHHHHHHHHC
Confidence 588899999999999999998888655555555544
No 211
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=30.95 E-value=21 Score=26.53 Aligned_cols=19 Identities=16% Similarity=0.055 Sum_probs=15.7
Q ss_pred hhhheecccceeEeeecCC
Q 032278 9 TFLVYGRKQKSVNIWFNDM 27 (144)
Q Consensus 9 ~~LATGSmDKsV~IWql~~ 27 (144)
.++++|+.|++|.+|++..
T Consensus 372 ~~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 372 GYLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp CTTSCCSSCCEEEEEETTT
T ss_pred ccccccccceEEEEEECCC
Confidence 3678888899999999854
No 212
>2a2p_A Selenoprotein M, SELM protein; redox enzyme, oxidoreductase; NMR {Mus musculus} SCOP: c.47.1.23
Probab=30.56 E-value=22 Score=26.73 Aligned_cols=22 Identities=9% Similarity=0.240 Sum_probs=20.4
Q ss_pred cccccCCChhHHHHHHHhcCcc
Q 032278 28 PHALTLLSFQDVGLWLEEINLG 49 (144)
Q Consensus 28 ~l~~~~WS~EDVa~WLeeiGL~ 49 (144)
.++...|+.|+|.+.|++.||-
T Consensus 71 ~I~Iekw~~d~I~efL~e~GF~ 92 (129)
T 2a2p_A 71 RIPLSQMTRDEINALVQELGFY 92 (129)
T ss_dssp EEECSSSCHHHHHHHHHHHTCC
T ss_pred EeecccCCHHHHHHHHHHcCCc
Confidence 6788999999999999999995
No 213
>1z4h_A TORI, TOR inhibition protein; winged helix, reverse turn, protein binding, DNA binding protein; NMR {Escherichia coli}
Probab=29.37 E-value=18 Score=22.56 Aligned_cols=13 Identities=8% Similarity=0.082 Sum_probs=11.7
Q ss_pred CCChhHHHHHHHh
Q 032278 33 LLSFQDVGLWLEE 45 (144)
Q Consensus 33 ~WS~EDVa~WLee 45 (144)
-|..+||.+||++
T Consensus 47 ~w~~~ev~~Wl~~ 59 (66)
T 1z4h_A 47 RWLYRDHCEFKNK 59 (66)
T ss_dssp EEEHHHHHHHHHH
T ss_pred EEeHHHHHHHHHH
Confidence 3999999999986
No 214
>2gs0_B Cellular tumor antigen P53; TFIIH, TFB1, activation, transcription, PH domain; NMR {Homo sapiens}
Probab=27.99 E-value=22 Score=23.68 Aligned_cols=10 Identities=30% Similarity=0.694 Sum_probs=9.5
Q ss_pred ChhHHHHHHH
Q 032278 35 SFQDVGLWLE 44 (144)
Q Consensus 35 S~EDVa~WLe 44 (144)
+.|||++||+
T Consensus 27 ~~eDv~~wl~ 36 (54)
T 2gs0_B 27 SPDDIEQWFT 36 (54)
T ss_pred CHHHHHHHhh
Confidence 8899999998
No 215
>2voi_B BH3-interacting domain death agonist P13; protein-protein complex, BCL-2, membrane, apoptosis, Pro-surviVal, mitochondrion, phosphoprotein; 2.1A {Mus musculus}
Probab=27.53 E-value=31 Score=20.89 Aligned_cols=23 Identities=26% Similarity=0.286 Sum_probs=18.5
Q ss_pred ccchHHHHHHHhHhhhccchHHH
Q 032278 70 MFTTEQILRFIRRCHMKWGDFIT 92 (144)
Q Consensus 70 k~T~e~il~~i~r~~~k~gd~it 92 (144)
++|-|+|++-|-|.--.|||.+-
T Consensus 1 se~qe~~i~~ia~~la~igd~~d 23 (34)
T 2voi_B 1 SESQEEIIHNIARHLAQIGDEMD 23 (34)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcchhHHHHHHHHccchhhhhh
Confidence 46889999999999899999764
No 216
>1ji8_A Dissimilatory siroheme-sulfite reductase; orthogonal helical bundle, structural genomics, PSI, protein structure initiative; NMR {Pyrobaculum aerophilum} SCOP: d.203.1.1
Probab=27.29 E-value=78 Score=23.12 Aligned_cols=41 Identities=20% Similarity=0.347 Sum_probs=26.9
Q ss_pred cccccCCChhHHHHHHH--hcCcchHHHHhhHcCcChhhhccCcccchH--HHHHHHhHhhhccch
Q 032278 28 PHALTLLSFQDVGLWLE--EINLGGYRQIFKENGVNGEYLEGMSMFTTE--QILRFIRRCHMKWGD 89 (144)
Q Consensus 28 ~l~~~~WS~EDVa~WLe--eiGL~qYre~Fk~NnIdG~eLi~Ltk~T~e--~il~~i~r~~~k~gd 89 (144)
-.+..+||+ ||+..|. ++|++ .| |++ +|++|+|....++|.
T Consensus 24 L~~~~dW~e-evA~~lA~~~egI~-----------------eL---Te~HW~VI~flR~~Y~e~~~ 68 (111)
T 1ji8_A 24 MQNPEDWDE-KVAEWLARELEGIQ-----------------KM---TEEHWKLVKYLREYWETFGT 68 (111)
T ss_dssp ECCGGGCCH-HHHHHHHHHHTCCS-----------------SC---CHHHHHHHHHHHHHTTTTSC
T ss_pred cCChHhCCH-HHHHHHHHhcCCch-----------------hc---CHHHHHHHHHHHHHHHHHCC
Confidence 457899995 6888887 33432 22 233 458888888777776
No 217
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=27.27 E-value=24 Score=24.65 Aligned_cols=17 Identities=0% Similarity=0.159 Sum_probs=15.4
Q ss_pred hhheecccceeEeeecC
Q 032278 10 FLVYGRKQKSVNIWFND 26 (144)
Q Consensus 10 ~LATGSmDKsV~IWql~ 26 (144)
+|++++.|++|.+|...
T Consensus 3 ~~v~~~~~~~v~~~d~~ 19 (337)
T 1pby_B 3 YILAPARPDKLVVIDTE 19 (337)
T ss_dssp EEEEEETTTEEEEEETT
T ss_pred EEEEcCCCCeEEEEECC
Confidence 68999999999999984
No 218
>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=26.58 E-value=36 Score=26.01 Aligned_cols=20 Identities=10% Similarity=0.107 Sum_probs=18.1
Q ss_pred cccCCChhHHHHHHHhcCcc
Q 032278 30 ALTLLSFQDVGLWLEEINLG 49 (144)
Q Consensus 30 ~~~~WS~EDVa~WLeeiGL~ 49 (144)
.+.+||.+||-+++++.|++
T Consensus 181 PL~~wt~~dV~~y~~~~~lp 200 (252)
T 2o8v_A 181 PIIDWDNRTIYQYLQKHGLK 200 (252)
T ss_dssp GGGSCCHHHHHHHHHHTTCC
T ss_pred chhhCCHHHHHHHHHHcCCC
Confidence 45789999999999999986
No 219
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=26.31 E-value=28 Score=27.86 Aligned_cols=58 Identities=5% Similarity=-0.002 Sum_probs=44.6
Q ss_pred HhcCcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHHHHHHHHH
Q 032278 44 EEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIK 101 (144)
Q Consensus 44 eeiGL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~~el~~~k 101 (144)
...|++.|.+.+.+.++||-.+..|.-+..++..+.++...++..-.++-.+-..+|+
T Consensus 108 ~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~ 165 (267)
T 3vnd_A 108 FANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLK 165 (267)
T ss_dssp HHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHH
T ss_pred HHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHH
Confidence 4458888999999999999999999988888888888888777665555444333444
No 220
>3ezq_A Tumor necrosis factor receptor superfamily member; apoptosis, DISC, FAS, membrane,receptor, transmembrane; 2.73A {Homo sapiens} SCOP: a.77.1.2 PDB: 1ddf_A
Probab=26.20 E-value=94 Score=22.57 Aligned_cols=62 Identities=24% Similarity=0.411 Sum_probs=46.2
Q ss_pred HHhcCcchHHHHhhHcCcChhhhccCc----ccchHHHHHHHhHhhhccc---hHHHHHHHHHHHHHHH
Q 032278 43 LEEINLGGYRQIFKENGVNGEYLEGMS----MFTTEQILRFIRRCHMKWG---DFITLCKELRRIKVAC 104 (144)
Q Consensus 43 LeeiGL~qYre~Fk~NnIdG~eLi~Lt----k~T~e~il~~i~r~~~k~g---d~itl~~el~~~kv~~ 104 (144)
.+..+..+.+++-+.+++.-.++.... ..+.||...-++..+++-| ..=+|++-||.++...
T Consensus 15 ae~m~~~~wK~laR~LGlse~~Id~I~~d~~~d~~Eq~~qlLr~W~~~~G~~aa~~~Li~aLr~~~l~~ 83 (115)
T 3ezq_A 15 AGVMTLSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQLLRNWHQLHGKKEAYDTLIKDLKKANLCT 83 (115)
T ss_dssp HHTSCHHHHHHHHHHTTCCHHHHHHHHHHCSSCHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCHHHHHHHHHHcCCCHhhHHHHHHcCCCChHHHHHHHHHHHHHHhCcccHHHHHHHHHHHccchh
Confidence 456678888888777777666665433 4567999999999988886 4578899999887543
No 221
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae}
Probab=26.02 E-value=34 Score=26.35 Aligned_cols=21 Identities=19% Similarity=0.297 Sum_probs=18.3
Q ss_pred cccCCChhHHHHHHHhcCcch
Q 032278 30 ALTLLSFQDVGLWLEEINLGG 50 (144)
Q Consensus 30 ~~~~WS~EDVa~WLeeiGL~q 50 (144)
...+||.+||-+.+++.|++-
T Consensus 186 PL~~wt~~dV~~Yi~~~~lp~ 206 (261)
T 2oq2_A 186 PLINWTFEQVKQYIDANNVPY 206 (261)
T ss_dssp TTTTCCHHHHHHHHHHHTCCC
T ss_pred chHhCCHHHHHHHHHHcCCCC
Confidence 457899999999999999873
No 222
>2igp_A Retinoblastoma-associated protein HEC; calponin homology (CH) domain, alpha helices, cell cycle; 1.80A {Homo sapiens}
Probab=26.00 E-value=89 Score=22.37 Aligned_cols=40 Identities=18% Similarity=0.181 Sum_probs=28.4
Q ss_pred hhHHHHHHHhcCcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHh
Q 032278 36 FQDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRC 83 (144)
Q Consensus 36 ~EDVa~WLeeiGL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~ 83 (144)
..++.++|.+.|+++ .|+.+.|.+.|.-.---|.+||-++
T Consensus 20 ~~~i~~fL~~~~~~~--------~is~k~L~~Pt~kdF~~if~fL~~~ 59 (120)
T 2igp_A 20 IRQLCEFLTENGYAH--------NVSMKSLQAPSVKDFLKIFTFLYGF 59 (120)
T ss_dssp HHHHHHHHHHTTCSS--------CCCTTTTSSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCC--------CCCccccCCCCHHHHHHHHHHHHHh
Confidence 467889999988863 4777777666665555667777665
No 223
>2kbw_B BH3-interacting domain death agonist; MCL-1, BID_BH3, complex, alternative splicing, apoptosis, CY developmental protein, differentiation, membrane; NMR {Homo sapiens}
Probab=25.61 E-value=37 Score=20.67 Aligned_cols=24 Identities=29% Similarity=0.329 Sum_probs=20.1
Q ss_pred cccchHHHHHHHhHhhhccchHHH
Q 032278 69 SMFTTEQILRFIRRCHMKWGDFIT 92 (144)
Q Consensus 69 tk~T~e~il~~i~r~~~k~gd~it 92 (144)
.++|-|+|++-|-|.--.|||.+-
T Consensus 4 dse~qe~~i~~ia~qla~igd~~d 27 (35)
T 2kbw_B 4 GSESQEDIIRNIARHLAQVGDSMD 27 (35)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccchhHHHHHHHHccchhhhhh
Confidence 468899999999999899999763
No 224
>2goy_A Adenosine phosphosulfate reductase; iron sulfur cluster, nucleotide binding, thiosulfonate intermediate, oxidoreductase; HET: ADX; 2.70A {Pseudomonas aeruginosa}
Probab=25.14 E-value=39 Score=26.19 Aligned_cols=21 Identities=14% Similarity=0.192 Sum_probs=18.4
Q ss_pred cccCCChhHHHHHHHhcCcch
Q 032278 30 ALTLLSFQDVGLWLEEINLGG 50 (144)
Q Consensus 30 ~~~~WS~EDVa~WLeeiGL~q 50 (144)
.+.+||.+||-+++++.|++-
T Consensus 195 PL~~wt~~dV~~Yi~~~~lp~ 215 (275)
T 2goy_A 195 PLSSMTSEEVWGYIRMLELPY 215 (275)
T ss_dssp TTTTCCHHHHHHHHHHTTCCC
T ss_pred chHhCCHHHHHHHHHHhCCCC
Confidence 457899999999999999873
No 225
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=24.34 E-value=41 Score=24.52 Aligned_cols=20 Identities=10% Similarity=0.107 Sum_probs=17.8
Q ss_pred cccCCChhHHHHHHHhcCcc
Q 032278 30 ALTLLSFQDVGLWLEEINLG 49 (144)
Q Consensus 30 ~~~~WS~EDVa~WLeeiGL~ 49 (144)
.+.+||.+||-+++++.|++
T Consensus 180 PLl~~t~~dI~~y~~~~~lp 199 (215)
T 1sur_A 180 PIIDWDNRTIYQYLQKHGLK 199 (215)
T ss_dssp TTTTCCHHHHHHHHHHHTCC
T ss_pred chHhCCHHHHHHHHHHhCCC
Confidence 45789999999999999985
No 226
>1n1j_A NF-YB; histone-like PAIR, DNA binding protein; 1.67A {Homo sapiens} SCOP: a.22.1.3
Probab=23.65 E-value=53 Score=22.01 Aligned_cols=23 Identities=9% Similarity=0.236 Sum_probs=19.7
Q ss_pred CCChhHHHHHHHhcCcchHHHHh
Q 032278 33 LLSFQDVGLWLEEINLGGYRQIF 55 (144)
Q Consensus 33 ~WS~EDVa~WLeeiGL~qYre~F 55 (144)
.=+.+||..=++++||.+|...=
T Consensus 62 TI~~~Dv~~Al~~l~F~~~i~~~ 84 (93)
T 1n1j_A 62 TINGEDILFAMSTLGFDSYVEPL 84 (93)
T ss_dssp SBCHHHHHHHHHHTTCGGGHHHH
T ss_pred ccCHHHHHHHHHHcCcHhhHHHH
Confidence 45789999999999999998653
No 227
>3cxj_A Uncharacterized protein; PSI-II, structural genomics structure initiative; 2.80A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=22.75 E-value=29 Score=26.92 Aligned_cols=15 Identities=27% Similarity=0.401 Sum_probs=13.1
Q ss_pred ChhHHHHHHHhcCcc
Q 032278 35 SFQDVGLWLEEINLG 49 (144)
Q Consensus 35 S~EDVa~WLeeiGL~ 49 (144)
|.++|.+||.++||-
T Consensus 4 ~~~~I~~WL~eeG~~ 18 (165)
T 3cxj_A 4 SQEMIKKWLDEEGFL 18 (165)
T ss_dssp HHHHHHHHHHHTTCE
T ss_pred cHHHHHHHHHHcCce
Confidence 478999999999984
No 228
>3omd_A Uncharacterized protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, unknown function; HET: MSE; 1.50A {Leptospirillum rubarum}
Probab=22.59 E-value=48 Score=25.16 Aligned_cols=32 Identities=16% Similarity=0.247 Sum_probs=27.5
Q ss_pred HHHhhHcCcChhhhccC--cccchHHHHHHHhHh
Q 032278 52 RQIFKENGVNGEYLEGM--SMFTTEQILRFIRRC 83 (144)
Q Consensus 52 re~Fk~NnIdG~eLi~L--tk~T~e~il~~i~r~ 83 (144)
+.+|..++|+-.++..+ +.-|+|+|+.+++..
T Consensus 52 ~~~l~flgI~~~~~~~~V~~~~sD~eil~wv~~~ 85 (145)
T 3omd_A 52 QAFFSFFGLDHEKFAEAVKSRPQDQDMLAWVHSQ 85 (145)
T ss_dssp HHHHHHHTCCHHHHHHHHTTCCSHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 45788889999998876 888999999999885
No 229
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=21.42 E-value=35 Score=26.37 Aligned_cols=50 Identities=6% Similarity=-0.000 Sum_probs=38.0
Q ss_pred hcCcchHHHHhhHcCcChhhhccCcccchHHHHHHHhHhhhccchHHHHH
Q 032278 45 EINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLC 94 (144)
Q Consensus 45 eiGL~qYre~Fk~NnIdG~eLi~Ltk~T~e~il~~i~r~~~k~gd~itl~ 94 (144)
..|.+.|.+.+.+.++||--+..++.++.+..++.++.+.++.+.++.-.
T Consensus 108 ~~g~~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l~~p~ 157 (268)
T 1qop_A 108 NNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPN 157 (268)
T ss_dssp TTCHHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEECTT
T ss_pred HhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEECCC
Confidence 34667788888899999999998888777777888888766666555443
No 230
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2
Probab=20.72 E-value=48 Score=26.80 Aligned_cols=30 Identities=17% Similarity=0.179 Sum_probs=18.3
Q ss_pred cccCCChhHHHHHHHhcCcch-------HHHHhhHcC
Q 032278 30 ALTLLSFQDVGLWLEEINLGG-------YRQIFKENG 59 (144)
Q Consensus 30 ~~~~WS~EDVa~WLeeiGL~q-------Yre~Fk~Nn 59 (144)
.+.+||.+||-+++.+.|++- ||+.|+.|+
T Consensus 204 PLl~wt~~dIw~Yi~~~~lp~~~LY~~~~r~~~~r~g 240 (325)
T 1zun_A 204 PLSNWTELDIWQYIYLEGIPIVPLYFAAERDVIEKNG 240 (325)
T ss_dssp TTTTCCHHHHHHHHHHHTCCCCSCCSCC---------
T ss_pred chhhCCHHHHHHHHHHhCCCcchhhhcccccccccCC
Confidence 558999999999999999852 366666665
No 231
>1j9i_A GPNU1 DBD;, terminase small subunit; DNA binding domain, homodimer, viral assembly, winged helix-turn-helix, viral protein; NMR {Enterobacteria phage lambda} SCOP: a.6.1.5
Probab=20.26 E-value=36 Score=20.99 Aligned_cols=26 Identities=15% Similarity=0.107 Sum_probs=17.7
Q ss_pred ccCCChhHHHHHHHhcCcchHHHHhh
Q 032278 31 LTLLSFQDVGLWLEEINLGGYRQIFK 56 (144)
Q Consensus 31 ~~~WS~EDVa~WLeeiGL~qYre~Fk 56 (144)
..-|..+||.+||++-.-..=.+.++
T Consensus 38 ~~~y~~~dv~~wl~~~~~~~~~~~~~ 63 (68)
T 1j9i_A 38 EVLYDSAAVIKWYAERDAEIENEKLR 63 (68)
T ss_dssp CCEEEHHHHHHHHTTTGGGGGGGGGG
T ss_pred eEEECHHHHHHHHHHCcccccchHHH
Confidence 35689999999998765443333333
No 232
>1ich_A TNF-1, tumor necrosis factor receptor-1; death domain, apoptosis; NMR {Homo sapiens} SCOP: a.77.1.2
Probab=20.04 E-value=1.3e+02 Score=21.70 Aligned_cols=65 Identities=12% Similarity=0.106 Sum_probs=46.1
Q ss_pred HHHHHHhcCcchHHHHhhHcC-----cChhhhccCcccchHHHHHHHhHhhhccc----hHHHHHHHHHHHHHHH
Q 032278 39 VGLWLEEINLGGYRQIFKENG-----VNGEYLEGMSMFTTEQILRFIRRCHMKWG----DFITLCKELRRIKVAC 104 (144)
Q Consensus 39 Va~WLeeiGL~qYre~Fk~Nn-----IdG~eLi~Ltk~T~e~il~~i~r~~~k~g----d~itl~~el~~~kv~~ 104 (144)
.-+-.+++|+.+.+++.+.++ |+.-+..+- .-+.||...-++...++-| .+=+|++-|++++...
T Consensus 16 l~~i~d~v~~~~WK~~aRkLGLse~~Id~Ie~~~~-r~l~Eq~yqmLr~W~~~~G~~~Atv~~L~~aLr~~~l~~ 89 (112)
T 1ich_A 16 LYAVVENVPPLRWKEFVKRLGLSDHEIDRLELQNG-RCLREAQYSMLATWRRRTPRREATLELLGRVLRDMDLLG 89 (112)
T ss_dssp HHHHHHHSCSTTHHHHHHHHTCCHHHHHHHHHHCC-SCHHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHHTTCHH
T ss_pred HHHHHHhCCHHHHHHHHHHcCCCHHHHHHHHHHCc-CChHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHhccHH
Confidence 344567778888887766555 555554443 3378999888888888876 6889999999876443
No 233
>3oq9_A Tumor necrosis factor receptor superfamily member; apoptosis, DISC, FAS; 6.80A {Mus musculus}
Probab=20.03 E-value=1e+02 Score=21.14 Aligned_cols=59 Identities=17% Similarity=0.299 Sum_probs=39.5
Q ss_pred HhcCcchHHHHhhHcCcChhhhccCc----ccchHHHHHHHhHhhhccc---hHHHHHHHHHHHHH
Q 032278 44 EEINLGGYRQIFKENGVNGEYLEGMS----MFTTEQILRFIRRCHMKWG---DFITLCKELRRIKV 102 (144)
Q Consensus 44 eeiGL~qYre~Fk~NnIdG~eLi~Lt----k~T~e~il~~i~r~~~k~g---d~itl~~el~~~kv 102 (144)
+..+..+.+++-+.++++-.++.+.. ..+.||-..-++..+++-| .+=+|++-||.++.
T Consensus 8 ~~~~~~~wK~~~R~LGlse~~Id~I~~~~~~d~~Eq~~qmL~~W~~~~g~~a~~~~Li~~Lr~~~l 73 (86)
T 3oq9_A 8 EDMTIQEAKKFARENNIKEGKIDEIMHDSIQDTAEQKVQLLLCWYQSHGKSDAYQDLIKGLKKAEC 73 (86)
T ss_dssp HHSCHHHHHHHHHTTTSCHHHHHHHHHTCTTCCTTHHHHHHHHHHHHSCSSSHHHHHHHHHHHTTC
T ss_pred HHcCHHHHHHHHHHcCCCHhHHHHHHHhCCCChHHHHHHHHHHHHHHhCcchHHHHHHHHHHHccc
Confidence 44566666666665555555544332 3456999999999888875 45778888888763
Done!