BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032281
(144 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255571087|ref|XP_002526494.1| 40S ribosomal protein S11, putative [Ricinus communis]
gi|223534169|gb|EEF35885.1| 40S ribosomal protein S11, putative [Ricinus communis]
Length = 159
Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/159 (89%), Positives = 144/159 (90%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF+KKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 159
>gi|414586503|tpg|DAA37074.1| TPA: 40S ribosomal protein S11 [Zea mays]
Length = 571
Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 137/159 (86%), Positives = 141/159 (88%), Gaps = 16/159 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTE+AFLKQP GKGGNRFWK+IGLGFKTPREAIEGTYIDKKCP
Sbjct: 412 MAEQTERAFLKQPKVFLCSKKATKVNKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP 471
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRI+AGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 472 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 531
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGS-SGGAKKAFTA 143
GDHVIIGQCRP+SKTVRFNVLKVIPAGS SG KKAFTA
Sbjct: 532 GDHVIIGQCRPVSKTVRFNVLKVIPAGSKSGAVKKAFTA 570
>gi|242065758|ref|XP_002454168.1| hypothetical protein SORBIDRAFT_04g025870 [Sorghum bicolor]
gi|242076386|ref|XP_002448129.1| hypothetical protein SORBIDRAFT_06g021750 [Sorghum bicolor]
gi|241933999|gb|EES07144.1| hypothetical protein SORBIDRAFT_04g025870 [Sorghum bicolor]
gi|241939312|gb|EES12457.1| hypothetical protein SORBIDRAFT_06g021750 [Sorghum bicolor]
Length = 160
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/159 (87%), Positives = 141/159 (88%), Gaps = 16/159 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWK+IGLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLCSKKAAKGNKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRI+AGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGS-SGGAKKAFTA 143
GDHVIIGQCRPLSKTVRFNVLKVIPAGS SG KKAFTA
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSKSGAVKKAFTA 159
>gi|326497551|dbj|BAK05865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 159
Score = 275 bits (703), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 133/158 (84%), Positives = 140/158 (88%), Gaps = 15/158 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEK+FLKQP GK GNRFWKS+GLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTV+IRGRI+AGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61 FTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTA 143
GDHVIIGQCRPLSKTVRFNVLKV+PAG++GG KKAF A
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVVPAGTTGGGKKAFIA 158
>gi|62287477|sp|Q9M5M1.1|RS11_EUPES RecName: Full=40S ribosomal protein S11
gi|6984142|gb|AAF34771.1|AF227626_1 40S ribosomal protein S11 [Euphorbia esula]
Length = 159
Score = 274 bits (701), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 139/159 (87%), Positives = 143/159 (89%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPREAI+GTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLASKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIDGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF+KKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGG KKAFTA+
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGVKKAFTAI 159
>gi|224063643|ref|XP_002301243.1| predicted protein [Populus trichocarpa]
gi|118484152|gb|ABK93959.1| unknown [Populus trichocarpa]
gi|118485320|gb|ABK94519.1| unknown [Populus trichocarpa]
gi|222842969|gb|EEE80516.1| predicted protein [Populus trichocarpa]
Length = 159
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 138/159 (86%), Positives = 143/159 (89%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPRVFLSSKKSGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVS+RGRILAGTCHSAKMNRTIIVRRNYLH+VKKYQRYEKRHSNIPAHISPCFR++E
Sbjct: 61 FTGTVSVRGRILAGTCHSAKMNRTIIVRRNYLHWVKKYQRYEKRHSNIPAHISPCFRIRE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GDHV IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM
Sbjct: 121 GDHVTIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 159
>gi|195626802|gb|ACG35231.1| 40S ribosomal protein S11 [Zea mays]
Length = 160
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/159 (85%), Positives = 141/159 (88%), Gaps = 16/159 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTE+AFLKQP GKGGNRFWK+IGLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTERAFLKQPKVFLCSKKATKVNKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRI+AGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGS-SGGAKKAFTA 143
GDHVIIGQCRP+SKTVRFNV+KVIPAGS SG KKAFTA
Sbjct: 121 GDHVIIGQCRPVSKTVRFNVVKVIPAGSKSGAVKKAFTA 159
>gi|226506626|ref|NP_001146950.1| 40S ribosomal protein S11 [Zea mays]
gi|195605736|gb|ACG24698.1| 40S ribosomal protein S11 [Zea mays]
Length = 160
Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 136/159 (85%), Positives = 141/159 (88%), Gaps = 16/159 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTE+AFLKQP GKGGNRFWK+IGLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTERAFLKQPKVFLCSKKASKGNKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRI+AGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGS-SGGAKKAFTA 143
GDHVIIGQCRP+SKTVRFNV+KVIPAGS SG KKAFTA
Sbjct: 121 GDHVIIGQCRPVSKTVRFNVVKVIPAGSKSGAVKKAFTA 159
>gi|326496288|dbj|BAJ94606.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 159
Score = 271 bits (694), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/158 (83%), Positives = 139/158 (87%), Gaps = 15/158 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEK+FLKQP GK GNRFWKS+GLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTV+IRGRI+AGT HSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61 FTGTVAIRGRIIAGTYHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTA 143
GDHVIIGQCRPLSKTVRFNVLKV+PAG++GG KKAF A
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVVPAGTTGGGKKAFIA 158
>gi|351721866|ref|NP_001236968.1| 40S ribosomal protein S11 [Glycine max]
gi|1173223|sp|P17093.2|RS11_SOYBN RecName: Full=40S ribosomal protein S11
gi|454848|gb|AAC14469.1| ribosomal protein S11 [Glycine max]
gi|255625845|gb|ACU13267.1| unknown [Glycine max]
Length = 159
Score = 271 bits (693), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 139/159 (87%), Positives = 140/159 (88%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSTKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRILAGTCHSAKMNRTIIVRRNYLHF+KKYQRYEKRHSNIPAHISP FRVKE
Sbjct: 61 FTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPAFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GDHVIIGQCRPLSKTVRFNVLKVIPAGSS GAKKAFT M
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
>gi|356562904|ref|XP_003549708.1| PREDICTED: 40S ribosomal protein S11-like [Glycine max]
Length = 159
Score = 271 bits (693), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 139/159 (87%), Positives = 140/159 (88%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRILAGTCHSAKMNRTIIVRRNYLHF+KKYQRYEKRHSNIPAHISP FRVKE
Sbjct: 61 FTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPAFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GDHVIIGQCRPLSKTVRFNVLKVIPAGSS GAKKAFT M
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
>gi|255583494|ref|XP_002532505.1| 40S ribosomal protein S11, putative [Ricinus communis]
gi|223527780|gb|EEF29881.1| 40S ribosomal protein S11, putative [Ricinus communis]
Length = 159
Score = 271 bits (692), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 138/159 (86%), Positives = 141/159 (88%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKS+GLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSVGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRILAGTCHSAKM R+IIVRRNYLHF+KKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61 FTGTVSIRGRILAGTCHSAKMMRSIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGG KKAFT M
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGGKKAFTGM 159
>gi|297802956|ref|XP_002869362.1| 40S ribosomal protein S11 [Arabidopsis lyrata subsp. lyrata]
gi|297315198|gb|EFH45621.1| 40S ribosomal protein S11 [Arabidopsis lyrata subsp. lyrata]
Length = 159
Score = 271 bits (692), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 133/159 (83%), Positives = 137/159 (86%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWK+IGLGFKTPREAIEG Y+DKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKEKRPGKGGNRFWKNIGLGFKTPREAIEGAYVDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRILAGTCHSAKM RTIIVRR+YLHFVKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61 FTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GDHV IGQCRPLSKTVRFNVLKVIPAGSS KKAFT M
Sbjct: 121 GDHVTIGQCRPLSKTVRFNVLKVIPAGSSSIGKKAFTGM 159
>gi|224137086|ref|XP_002327018.1| predicted protein [Populus trichocarpa]
gi|118481533|gb|ABK92709.1| unknown [Populus trichocarpa]
gi|222835333|gb|EEE73768.1| predicted protein [Populus trichocarpa]
Length = 159
Score = 269 bits (688), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 137/159 (86%), Positives = 142/159 (89%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRIL+GTCHSAKMNRTIIVRRNYLH+VKKYQRYEKRHSNIPAHISPCFRV+E
Sbjct: 61 FTGTVSIRGRILSGTCHSAKMNRTIIVRRNYLHWVKKYQRYEKRHSNIPAHISPCFRVRE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GD+VIIGQCRPLSKTVRFNVLKVIPAGSSGGAKK FT M
Sbjct: 121 GDYVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKVFTGM 159
>gi|326487436|dbj|BAJ89702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 161
Score = 269 bits (687), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 133/161 (82%), Positives = 140/161 (86%), Gaps = 17/161 (10%)
Query: 1 MAEQTEKAFLKQP----------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKC 44
MAEQTEKAFLKQP GK GNRFWKS+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MAEQTEKAFLKQPKVFLCSKKATKGNNKPGKEGNRFWKSVGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVK 104
PFTGTVSIRGRI+AGTCHSAKMNRTIIVRRNYLH+VKKYQRYEKRHSNIPAHISPCFRV+
Sbjct: 61 PFTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVR 120
Query: 105 EGDHVIIGQCRPLSKTVRFNVLKVIPAGS-SGGAKKAFTAM 144
EGDHVIIGQCRPLSKTVRFNVLKV+PAGS SG KKAFT +
Sbjct: 121 EGDHVIIGQCRPLSKTVRFNVLKVVPAGSKSGAVKKAFTGV 161
>gi|357150113|ref|XP_003575346.1| PREDICTED: 40S ribosomal protein S11-like [Brachypodium distachyon]
Length = 161
Score = 268 bits (685), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 134/160 (83%), Positives = 139/160 (86%), Gaps = 17/160 (10%)
Query: 1 MAEQTEKAFLKQP----------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKC 44
MAEQTEK+FLKQP GK GNRFWKS+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MAEQTEKSFLKQPKVFLCPKKITKGNNKPGKQGNRFWKSVGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVK 104
PFTGTVSIRGRI+AGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRV+
Sbjct: 61 PFTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVR 120
Query: 105 EGDHVIIGQCRPLSKTVRFNVLKVIPAGS-SGGAKKAFTA 143
EGDHVIIGQCRPLSKTVRFNVLKVIPAGS SG KKAFT
Sbjct: 121 EGDHVIIGQCRPLSKTVRFNVLKVIPAGSKSGAVKKAFTG 160
>gi|351726638|ref|NP_001238157.1| uncharacterized protein LOC100500186 [Glycine max]
gi|255629605|gb|ACU15150.1| unknown [Glycine max]
Length = 159
Score = 268 bits (684), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 136/159 (85%), Positives = 140/159 (88%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLCSKKGGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRILAGTCHSAKM RTIIVRRNYLHF+KKYQRYEKRHSNIP+HISPCFRVKE
Sbjct: 61 FTGNVSIRGRILAGTCHSAKMTRTIIVRRNYLHFIKKYQRYEKRHSNIPSHISPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GDHVIIGQCRP+SKTVRFNVLKVIPAGSS GAKKAFT M
Sbjct: 121 GDHVIIGQCRPISKTVRFNVLKVIPAGSSSGAKKAFTGM 159
>gi|449454301|ref|XP_004144894.1| PREDICTED: 40S ribosomal protein S11-3-like [Cucumis sativus]
gi|449471994|ref|XP_004153463.1| PREDICTED: 40S ribosomal protein S11-3-like [Cucumis sativus]
gi|449522568|ref|XP_004168298.1| PREDICTED: 40S ribosomal protein S11-3-like [Cucumis sativus]
Length = 159
Score = 268 bits (684), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 133/159 (83%), Positives = 137/159 (86%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWK+IGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLCSKKTAKGNKPGKGGNRFWKNIGLGFKTPRDAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
F GTVSIRGRILAGTCHSAKM RTIIVRRNYLH+VKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61 FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GDHVIIGQCRPLSKTVRFNVLKVIPAGSS KKAF +
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 159
>gi|351721893|ref|NP_001236713.1| uncharacterized protein LOC100500094 [Glycine max]
gi|255629087|gb|ACU14888.1| unknown [Glycine max]
Length = 159
Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/159 (85%), Positives = 139/159 (87%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLCSKKGGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRILAGTCHSAKM RTIIVRRNYLHF+KKYQRYEKRHSNIPAH SPCFRVKE
Sbjct: 61 FTGNVSIRGRILAGTCHSAKMTRTIIVRRNYLHFIKKYQRYEKRHSNIPAHTSPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GDHVIIGQCRP+SKTVRFNVLKVIPAGSS GAKKAFT M
Sbjct: 121 GDHVIIGQCRPISKTVRFNVLKVIPAGSSSGAKKAFTGM 159
>gi|357168464|ref|XP_003581660.1| PREDICTED: 40S ribosomal protein S11-like [Brachypodium distachyon]
Length = 169
Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/158 (82%), Positives = 139/158 (87%), Gaps = 16/158 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+A QTEKAFLKQP GK GNRFWKS+GLGFKTPREAIEGTYIDKKCP
Sbjct: 12 LAVQTEKAFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCP 71
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTV+IRGRI+AGTCHSAKMNRTIIVRR+YLHFVKKYQRYEKRHSNIPAHISPCFR++E
Sbjct: 72 FTGTVAIRGRIIAGTCHSAKMNRTIIVRRDYLHFVKKYQRYEKRHSNIPAHISPCFRIRE 131
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTA 143
GDHVIIGQCRPLSKTVRFNVLKVIPAGS+GG KKAF A
Sbjct: 132 GDHVIIGQCRPLSKTVRFNVLKVIPAGSTGG-KKAFVA 168
>gi|218200667|gb|EEC83094.1| hypothetical protein OsI_28229 [Oryza sativa Indica Group]
Length = 159
Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/158 (86%), Positives = 141/158 (89%), Gaps = 15/158 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTE+AFLKQP GKGGNRFWK+IGLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTERAFLKQPKVFLCPKKSGKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRI+AGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTA 143
GDHVIIGQCRPLSKTVRFNV+KVIPAGS+GG KKAF A
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVIKVIPAGSTGGGKKAFIA 158
>gi|357518203|ref|XP_003629390.1| 40S ribosomal protein S11 [Medicago truncatula]
gi|217071062|gb|ACJ83891.1| unknown [Medicago truncatula]
gi|355523412|gb|AET03866.1| 40S ribosomal protein S11 [Medicago truncatula]
gi|388491240|gb|AFK33686.1| unknown [Medicago truncatula]
Length = 160
Score = 266 bits (679), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 137/160 (85%), Positives = 140/160 (87%), Gaps = 16/160 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKS+GLGFKTPREA EGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFWKSVGLGFKTPREATEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRILAGTCHSAKMNRTIIVRRNYLHF+KKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61 FTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGA-KKAFTAM 144
GDHVIIGQCRPLSKTVRFNVLKVIPAGSS GA KKAFT M
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAGKKAFTGM 160
>gi|388522737|gb|AFK49430.1| unknown [Lotus japonicus]
Length = 159
Score = 266 bits (679), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 135/159 (84%), Positives = 139/159 (87%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRILAGTCHSAKM RTIIVRRNYLHF+KKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61 FTGNVSIRGRILAGTCHSAKMTRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GDHVIIGQCRP+SKTVRFNVLKVIPAGSS G KKAFT +
Sbjct: 121 GDHVIIGQCRPISKTVRFNVLKVIPAGSSSGVKKAFTGV 159
>gi|388501490|gb|AFK38811.1| unknown [Lotus japonicus]
gi|388522499|gb|AFK49311.1| unknown [Lotus japonicus]
Length = 159
Score = 265 bits (676), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 133/159 (83%), Positives = 139/159 (87%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPR+AIEG+YIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGSYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VS+RGRILAGTCHSAKM RTIIVRRNYLHF+KKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61 FTGNVSVRGRILAGTCHSAKMTRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GDHVIIGQCRPLSKTVRFNVLKV+PAGSSG KKAFT +
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVVPAGSSGAVKKAFTGI 159
>gi|414586502|tpg|DAA37073.1| TPA: hypothetical protein ZEAMMB73_529952 [Zea mays]
Length = 568
Score = 264 bits (675), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 134/159 (84%), Positives = 138/159 (86%), Gaps = 19/159 (11%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTE+AFLKQP GKGGNRFWK+IGLGFKTPREAIEGTYIDKKCP
Sbjct: 412 MAEQTERAFLKQPKVFLCSKKATKVNKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP 471
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRI+AGTCHSAKMNRTIIVRRNYLHFVKK YEKRHSNIPAHISPCFRVKE
Sbjct: 472 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKK---YEKRHSNIPAHISPCFRVKE 528
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGS-SGGAKKAFTA 143
GDHVIIGQCRP+SKTVRFNVLKVIPAGS SG KKAFTA
Sbjct: 529 GDHVIIGQCRPVSKTVRFNVLKVIPAGSKSGAVKKAFTA 567
>gi|449441892|ref|XP_004138716.1| PREDICTED: 40S ribosomal protein S11-3-like isoform 2 [Cucumis
sativus]
gi|449493335|ref|XP_004159259.1| PREDICTED: 40S ribosomal protein S11-3-like isoform 2 [Cucumis
sativus]
Length = 159
Score = 264 bits (674), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 135/159 (84%), Positives = 139/159 (87%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRILAGTCHSAKM RTIIVRRNYLH+VKKYQRYEKRHSNIPAHI+PCFRVKE
Sbjct: 61 FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHIAPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GDHVIIGQCRPLSKTVRFNVLKVIPAGSS G KKAF +
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSAGGKKAFAGI 159
>gi|115459270|ref|NP_001053235.1| Os04g0502300 [Oryza sativa Japonica Group]
gi|113564806|dbj|BAF15149.1| Os04g0502300 [Oryza sativa Japonica Group]
gi|116310793|emb|CAH67584.1| OSIGBa0112M24.1 [Oryza sativa Indica Group]
Length = 160
Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 137/159 (86%), Positives = 140/159 (88%), Gaps = 16/159 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTE+AFLKQP GKGGNRFWK+IGLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTERAFLKQPKVFLCPKKTTKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRI+AGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGS-SGGAKKAFTA 143
GDHVIIGQCRPLSKTVRFNVLKVIPAGS SG KK FTA
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSKSGAGKKVFTA 159
>gi|357145153|ref|XP_003573544.1| PREDICTED: 40S ribosomal protein S11-like [Brachypodium distachyon]
Length = 160
Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/159 (82%), Positives = 138/159 (86%), Gaps = 16/159 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GK GNRFWK++GLGFKTP+EAIEG YIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLCPKKSDKGKRPGKAGNRFWKNVGLGFKTPKEAIEGAYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRI+AGTCHSAKMNRTII+ RNYLHFVKKYQRYEKRHSNIPAHI PCFRVKE
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIICRNYLHFVKKYQRYEKRHSNIPAHIYPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGG-AKKAFTA 143
GDHVIIGQCRPLSKTVRFN+LKVIPAGS+GG KKAFTA
Sbjct: 121 GDHVIIGQCRPLSKTVRFNILKVIPAGSTGGTGKKAFTA 159
>gi|224144055|ref|XP_002325170.1| predicted protein [Populus trichocarpa]
gi|222866604|gb|EEF03735.1| predicted protein [Populus trichocarpa]
Length = 159
Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 134/159 (84%), Positives = 138/159 (86%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGL FKTPREA EGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKSIGLSFKTPREATEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRILAGTCHSAKM RTIIVRRNYLH+VKKYQRYEKRHSNIPAH+SPCFRV+E
Sbjct: 61 FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHWVKKYQRYEKRHSNIPAHVSPCFRVRE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GDHVIIGQCRPLSKTVRFNVLKVIPAGS+ G KKAFT M
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSAAGGKKAFTGM 159
>gi|192913032|gb|ACF06624.1| 40S ribosomal protein S11 [Elaeis guineensis]
Length = 159
Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 134/159 (84%), Positives = 139/159 (87%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTE+AFLKQP GKGGNRFWK+IGLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTERAFLKQPKVFLCSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRILAGTCHSAKMNRTIIVRRNYLH+V+KYQRYEKRHSNI AHISPCFRVKE
Sbjct: 61 FTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHYVRKYQRYEKRHSNIAAHISPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GDHVIIGQCRPLSKTVRFNVLKVIPAGS GG KKAF A+
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSKGGGKKAFAAV 159
>gi|357478439|ref|XP_003609505.1| 40S ribosomal protein S11 [Medicago truncatula]
gi|217075074|gb|ACJ85897.1| unknown [Medicago truncatula]
gi|355510560|gb|AES91702.1| 40S ribosomal protein S11 [Medicago truncatula]
gi|388497962|gb|AFK37047.1| unknown [Medicago truncatula]
Length = 160
Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/160 (84%), Positives = 141/160 (88%), Gaps = 16/160 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRF+KS+GLGFKTPREAI+GTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFFKSVGLGFKTPREAIDGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRILAGTCHSAKMNRTI+VRRNYLHF+KKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61 FTGNVSIRGRILAGTCHSAKMNRTIVVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGA-KKAFTAM 144
GDHVIIGQCRPLSKTVRFNVLKVIPAGSS GA KKAFT M
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAGKKAFTGM 160
>gi|297825329|ref|XP_002880547.1| ribosomal protein S11-beta [Arabidopsis lyrata subsp. lyrata]
gi|297326386|gb|EFH56806.1| ribosomal protein S11-beta [Arabidopsis lyrata subsp. lyrata]
Length = 159
Score = 262 bits (670), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 134/159 (84%), Positives = 137/159 (86%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWK+IGLGFKTPREA EG YIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREATEGAYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRILAGTCHSAKM RTIIVRRNYLHFVKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61 FTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GDHVIIGQCRPLSKTVRFNVLKVIPAGSS KKAF+ M
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSAIGKKAFSGM 159
>gi|297812523|ref|XP_002874145.1| ribosomal protein S11-beta [Arabidopsis lyrata subsp. lyrata]
gi|297319982|gb|EFH50404.1| ribosomal protein S11-beta [Arabidopsis lyrata subsp. lyrata]
Length = 159
Score = 261 bits (667), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 133/159 (83%), Positives = 137/159 (86%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWK+IGLGFKTPREAIEG YID KCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKTSGKGKRPGKGGNRFWKNIGLGFKTPREAIEGAYIDSKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRILAGTCHSAKM RTIIVRRNYLHFVKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61 FTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GDHVIIGQCRPLSKTVRFNVLKVIPAG+S KKAFT +
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGASAFGKKAFTGV 159
>gi|192911940|gb|ACF06578.1| 40S ribosomal protein S11 [Elaeis guineensis]
Length = 163
Score = 261 bits (667), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 135/160 (84%), Positives = 140/160 (87%), Gaps = 16/160 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTE+AFLKQP GKGGNRFWKSIGLGFKTPREAIEG Y+DKKCP
Sbjct: 1 MAEQTERAFLKQPKVFLCSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAIEGAYVDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRILAGTCHSAKMNRTIIVRRNYLH+VKKYQRYEKRHSNI AHISPCFRVKE
Sbjct: 61 FTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHYVKKYQRYEKRHSNIAAHISPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGA-KKAFTAM 144
GDHVIIGQCRPLSKTVRFNVLKVIPAGS GG+ KKAFTA+
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSKGGSGKKAFTAI 160
>gi|99014568|emb|CAK22271.1| 40S ribosomal protein S11 [Chenopodium rubrum]
Length = 159
Score = 261 bits (666), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 130/159 (81%), Positives = 139/159 (87%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWK+IGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSNKSGKGKRPGKGGNRFWKNIGLGFKTPRDAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRILAGTCHSAKM RTIIVRRNYLH++KKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61 FTGNVSIRGRILAGTCHSAKMQRTIIVRRNYLHYIKKYQRYEKRHSNIPAHVSPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GDHVIIGQCRP+SKTVRFNVLKVIPAG++ G KKAFT +
Sbjct: 121 GDHVIIGQCRPISKTVRFNVLKVIPAGAASGGKKAFTGL 159
>gi|166867|gb|AAA32866.1| ribosomal protein S11 (probable start codon at bp 67), partial
[Arabidopsis thaliana]
Length = 182
Score = 260 bits (665), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/160 (82%), Positives = 138/160 (86%), Gaps = 16/160 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWK+IGLGFKTPREAI+G Y+DKKCP
Sbjct: 23 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYVDKKCP 82
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRILAGTCHSAKM RTIIVRR+YLHFVKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 83 FTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 142
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGG-AKKAFTAM 144
GDH+IIGQCRPLSKTVRFNVLKVIPAGSS KKAFT M
Sbjct: 143 GDHIIIGQCRPLSKTVRFNVLKVIPAGSSSSFGKKAFTGM 182
>gi|15237819|ref|NP_197763.1| 40S ribosomal protein S11-3 [Arabidopsis thaliana]
gi|27735234|sp|P42733.2|RS113_ARATH RecName: Full=40S ribosomal protein S11-3
gi|13430736|gb|AAK25990.1|AF360280_1 putative 40S ribosomal protein S11 [Arabidopsis thaliana]
gi|10176841|dbj|BAB10047.1| 40S ribosomal protein S11 [Arabidopsis thaliana]
gi|17065614|gb|AAL33787.1| putative 40S ribosomal protein S11 [Arabidopsis thaliana]
gi|21592846|gb|AAM64796.1| 40S ribosomal protein S11 [Arabidopsis thaliana]
gi|332005823|gb|AED93206.1| 40S ribosomal protein S11-3 [Arabidopsis thaliana]
Length = 159
Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 132/159 (83%), Positives = 137/159 (86%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWK+IGLGFKTPREAI+G YID KCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKISGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYIDSKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRILAGTCHSAKM RTIIVRRNYLHFVKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61 FTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GDHVIIGQCRPLSKTVRFNVLKVIPAG+S KKAFT +
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGASAFGKKAFTGV 159
>gi|297819508|ref|XP_002877637.1| EMB1080 [Arabidopsis lyrata subsp. lyrata]
gi|297323475|gb|EFH53896.1| EMB1080 [Arabidopsis lyrata subsp. lyrata]
Length = 160
Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 133/160 (83%), Positives = 138/160 (86%), Gaps = 16/160 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPREAI+G Y+DKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAIDGAYVDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRILAGTCHSAKM RTIIVRR+YLHFVKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61 FTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGG-AKKAFTAM 144
GDH+IIGQCRPLSKTVRFNVLKVIPAGSS KKAFT M
Sbjct: 121 GDHIIIGQCRPLSKTVRFNVLKVIPAGSSSSFGKKAFTGM 160
>gi|343172677|gb|AEL99042.1| 40S ribosomal protein S11-1, partial [Silene latifolia]
gi|343172679|gb|AEL99043.1| 40S ribosomal protein S11-1, partial [Silene latifolia]
Length = 157
Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 129/157 (82%), Positives = 135/157 (85%), Gaps = 15/157 (9%)
Query: 3 EQTEKAFLKQPGKG---------------GNRFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
EQTEKAFLKQP G GNRF+KSIGLGFKTPR+AIEGTYIDKKCPFT
Sbjct: 1 EQTEKAFLKQPKVGILTKSGGKGKRPGKGGNRFFKSIGLGFKTPRDAIEGTYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
G VSIRGRILAGTCHSAKM RTIIVRRNYLH++KKYQRYEKRHSNI AH+SPCFRVKEGD
Sbjct: 61 GNVSIRGRILAGTCHSAKMQRTIIVRRNYLHYIKKYQRYEKRHSNIAAHVSPCFRVKEGD 120
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
HVIIGQCRPLSKTVRFNVLKVIPAGS+ G KKAFTAM
Sbjct: 121 HVIIGQCRPLSKTVRFNVLKVIPAGSASGGKKAFTAM 157
>gi|15229056|ref|NP_190462.1| 40S ribosomal protein S11-1 [Arabidopsis thaliana]
gi|133866|sp|P16181.1|RS111_ARATH RecName: Full=40S ribosomal protein S11-1; AltName: Full=Protein
EMBRYO DEFECTIVE 1080
gi|454808|gb|AAC14454.1| ribosomal protein S11 [Arabidopsis thaliana]
gi|6522573|emb|CAB62017.1| cytosolic ribosomal protein S11 [Arabidopsis thaliana]
gi|16649155|gb|AAL24429.1| cytosolic ribosomal protein S11 [Arabidopsis thaliana]
gi|20148571|gb|AAM10176.1| cytosolic ribosomal protein S11 [Arabidopsis thaliana]
gi|21593611|gb|AAM65578.1| cytosolic ribosomal protein S11 [Arabidopsis thaliana]
gi|332644953|gb|AEE78474.1| 40S ribosomal protein S11-1 [Arabidopsis thaliana]
Length = 160
Score = 258 bits (659), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 132/160 (82%), Positives = 138/160 (86%), Gaps = 16/160 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWK+IGLGFKTPREAI+G Y+DKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYVDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRILAGTCHSAKM RTIIVRR+YLHFVKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61 FTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGG-AKKAFTAM 144
GDH+IIGQCRPLSKTVRFNVLKVIPAGSS KKAFT M
Sbjct: 121 GDHIIIGQCRPLSKTVRFNVLKVIPAGSSSSFGKKAFTGM 160
>gi|418730665|gb|AFX66997.1| 40s ribosomal protein S11 [Solanum tuberosum]
Length = 159
Score = 257 bits (656), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 134/159 (84%), Positives = 138/159 (86%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQPGK---------------GGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQPG+ GGNR++KSIGLGFKTPREA EGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPGEFLSSKKTGKGKRPGKGGNRYFKSIGLGFKTPREATEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRILAGTCHSAKMNRTIIVRRNYLH+VKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61 FTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GDHV IGQCRPLSKTVRFNVLKVIPAGS GG KKAFT M
Sbjct: 121 GDHVTIGQCRPLSKTVRFNVLKVIPAGSGGGGKKAFTGM 159
>gi|125548930|gb|EAY94752.1| hypothetical protein OsI_16531 [Oryza sativa Indica Group]
gi|125590907|gb|EAZ31257.1| hypothetical protein OsJ_15361 [Oryza sativa Japonica Group]
Length = 167
Score = 257 bits (656), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 137/166 (82%), Positives = 140/166 (84%), Gaps = 23/166 (13%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTE+AFLKQP GKGGNRFWK+IGLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTERAFLKQPKVFLCPKKTTKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQR-------YEKRHSNIPAHIS 98
FTGTVSIRGRI+AGTCHSAKMNRTIIVRRNYLHFVKKYQR YEKRHSNIPAHIS
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNLVAGYEKRHSNIPAHIS 120
Query: 99 PCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGS-SGGAKKAFTA 143
PCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGS SG KK FTA
Sbjct: 121 PCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSKSGAGKKVFTA 166
>gi|15234873|ref|NP_194809.1| 40S ribosomal protein S11-2 [Arabidopsis thaliana]
gi|11134432|sp|O65569.2|RS112_ARATH RecName: Full=40S ribosomal protein S11-2
gi|5708091|emb|CAA18213.2| ribosomal protein S11-like [Arabidopsis thaliana]
gi|7269981|emb|CAB79798.1| ribosomal protein S11-like [Arabidopsis thaliana]
gi|15028245|gb|AAK76711.1| putative ribosomal protein S11 [Arabidopsis thaliana]
gi|20258899|gb|AAM14143.1| putative ribosomal protein S11 [Arabidopsis thaliana]
gi|332660410|gb|AEE85810.1| 40S ribosomal protein S11-2 [Arabidopsis thaliana]
Length = 159
Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/159 (82%), Positives = 137/159 (86%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWK+IGLGFKTPREAIEGTYID+KCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIEGTYIDQKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRIL+GTCHSAKM RTIIVRR+YLHFVKKY+RYEKRHSNIPAH+SPCFRVKE
Sbjct: 61 FTGTVSIRGRILSGTCHSAKMQRTIIVRRDYLHFVKKYRRYEKRHSNIPAHVSPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GD V IGQCRPLSKTVRFNVLKVIPAGSS KKAFT M
Sbjct: 121 GDRVTIGQCRPLSKTVRFNVLKVIPAGSSSIGKKAFTGM 159
>gi|225463039|ref|XP_002267523.1| PREDICTED: 40S ribosomal protein S11 [Vitis vinifera]
gi|296084564|emb|CBI25585.3| unnamed protein product [Vitis vinifera]
Length = 160
Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/160 (85%), Positives = 138/160 (86%), Gaps = 16/160 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLCSKKSAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRILAGTCHSAKM RTIIVRRNYLH+VKKYQRYEKRHSNIPAH SPCFRVKE
Sbjct: 61 FTGTVSIRGRILAGTCHSAKMMRTIIVRRNYLHYVKKYQRYEKRHSNIPAHTSPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIP-AGSSGGAKKAFTAM 144
GDHVIIGQCRPLSKTVRFNVLKVIP S GG KKAFTAM
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGGGKKAFTAM 160
>gi|116781265|gb|ABK22030.1| unknown [Picea sitchensis]
gi|116782422|gb|ABK22500.1| unknown [Picea sitchensis]
gi|148910763|gb|ABR18448.1| unknown [Picea sitchensis]
gi|224285933|gb|ACN40680.1| unknown [Picea sitchensis]
Length = 160
Score = 256 bits (653), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 131/160 (81%), Positives = 141/160 (88%), Gaps = 16/160 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTE+AFLKQP GKGGNRF+K++GLGFKTP+EA++GTYIDKKCP
Sbjct: 1 MAEQTERAFLKQPKVFLSSKKSGKGKRPGKGGNRFFKNVGLGFKTPKEAVQGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRILAGTC+SAKM RTIIVRR+YLHFVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61 FTGNVSIRGRILAGTCYSAKMTRTIIVRRDYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAG-SSGGAKKAFTAM 144
GDHVIIGQCRPLSKTVRFNVLKVIPAG SSG AKKAFTA+
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGSAKKAFTAI 160
>gi|170054|gb|AAA34006.1| ribosomal protein S11, partial [Glycine max]
Length = 141
Score = 255 bits (652), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 122/127 (96%), Positives = 123/127 (96%)
Query: 18 NRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYL 77
NRFWKSIGLGFKTPREAIEGTYIDKKCPFTG VSIRGRILAGTCHSAKMNRTIIVRRNYL
Sbjct: 15 NRFWKSIGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYL 74
Query: 78 HFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGA 137
HF+KKYQRYEKRHSNIPAHISP FRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS GA
Sbjct: 75 HFIKKYQRYEKRHSNIPAHISPAFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGA 134
Query: 138 KKAFTAM 144
KKAFT M
Sbjct: 135 KKAFTGM 141
>gi|388517331|gb|AFK46727.1| unknown [Lotus japonicus]
Length = 151
Score = 254 bits (650), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 129/151 (85%), Positives = 132/151 (87%), Gaps = 15/151 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRILAGTCHSAKM RTIIVRRNYLHF+KKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61 FTGNVSIRGRILAGTCHSAKMTRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGG 136
GDHVIIGQCRP+SKT RFNVLKVIPAGSS G
Sbjct: 121 GDHVIIGQCRPISKTARFNVLKVIPAGSSSG 151
>gi|115472817|ref|NP_001060007.1| Os07g0565000 [Oryza sativa Japonica Group]
gi|297603343|ref|NP_001053856.2| Os04g0613600 [Oryza sativa Japonica Group]
gi|313103641|pdb|3IZ6|P Chain P, Localization Of The Small Subunit Ribosomal Proteins Into
A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
Ribosome
gi|33146750|dbj|BAC79661.1| putative 40S ribosomal protein S11 [Oryza sativa Japonica Group]
gi|50508298|dbj|BAD30107.1| putative 40S ribosomal protein S11 [Oryza sativa Japonica Group]
gi|113611543|dbj|BAF21921.1| Os07g0565000 [Oryza sativa Japonica Group]
gi|215768067|dbj|BAH00296.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195559|gb|EEC77986.1| hypothetical protein OsI_17372 [Oryza sativa Indica Group]
gi|222637292|gb|EEE67424.1| hypothetical protein OsJ_24764 [Oryza sativa Japonica Group]
gi|255675771|dbj|BAF15770.2| Os04g0613600 [Oryza sativa Japonica Group]
Length = 161
Score = 254 bits (649), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 129/146 (88%), Positives = 131/146 (89%), Gaps = 15/146 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRI+AGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPA 131
GDHVIIGQCRPLSKTVRFNVLKVIPA
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPA 146
>gi|162458644|ref|NP_001105562.1| 40S ribosomal protein S11 [Zea mays]
gi|242074300|ref|XP_002447086.1| hypothetical protein SORBIDRAFT_06g028330 [Sorghum bicolor]
gi|133867|sp|P25460.1|RS11_MAIZE RecName: Full=40S ribosomal protein S11
gi|22470|emb|CAA39438.1| ribosomal protein S11 [Zea mays]
gi|195618816|gb|ACG31238.1| 40S ribosomal protein S11 [Zea mays]
gi|195624418|gb|ACG34039.1| 40S ribosomal protein S11 [Zea mays]
gi|195636792|gb|ACG37864.1| 40S ribosomal protein S11 [Zea mays]
gi|195654421|gb|ACG46678.1| 40S ribosomal protein S11 [Zea mays]
gi|223948191|gb|ACN28179.1| unknown [Zea mays]
gi|223974433|gb|ACN31404.1| unknown [Zea mays]
gi|223974575|gb|ACN31475.1| unknown [Zea mays]
gi|241938269|gb|EES11414.1| hypothetical protein SORBIDRAFT_06g028330 [Sorghum bicolor]
gi|413919495|gb|AFW59427.1| ribosomal protein S11 [Zea mays]
gi|414585478|tpg|DAA36049.1| TPA: 40S ribosomal protein S11 [Zea mays]
Length = 159
Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/158 (86%), Positives = 140/158 (88%), Gaps = 15/158 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRI+AGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTA 143
GDHVIIGQCRPLSKTVRFNV+KVIPAGS+ KKAFTA
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVVKVIPAGSAAAGKKAFTA 158
>gi|357437533|ref|XP_003589042.1| 40S ribosomal protein S11 [Medicago truncatula]
gi|355478090|gb|AES59293.1| 40S ribosomal protein S11 [Medicago truncatula]
Length = 161
Score = 253 bits (647), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/161 (81%), Positives = 140/161 (86%), Gaps = 17/161 (10%)
Query: 1 MAEQTEKAFLKQ---------------PGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQ PGKGGNRF K++GLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQNKVFLCSKISGKGKRPGKGGNRFHKTVGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRI++GTCHSAKMN+TI+VRRNYLHF+KKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61 FTGNVSIRGRIISGTCHSAKMNKTIVVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSS--GGAKKAFTAM 144
GDHVIIGQCRPLSKTVRFNVLKVIPAGSS GAKKAFT +
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAGAKKAFTGV 161
>gi|222640098|gb|EEE68230.1| hypothetical protein OsJ_26414 [Oryza sativa Japonica Group]
Length = 519
Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/159 (81%), Positives = 135/159 (84%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTE+AFLKQP GKGGNRFWK+IGLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTERAFLKQPKVFLCPKKSGKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRI+AGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GDHVIIGQCRPLSKTVRFNV+KVIPA A +F +
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVIKVIPAWFHSPAISSFLGI 159
>gi|166869|gb|AAA32867.1| ribosomal protein S11 [Arabidopsis thaliana]
Length = 159
Score = 249 bits (636), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/159 (79%), Positives = 134/159 (84%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWK+IGLGFKTPREAI+G YID KCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKISGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYIDSKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRILAGTCHSAKM RTIIVRR+YLHFVKKY RYEKRHS+IPAH+SPCFRVKE
Sbjct: 61 FTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYPRYEKRHSHIPAHVSPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GDHVIIGQCRPLSKTVRFNVLKVIP G+S KKA T +
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPTGASAFGKKALTGV 159
>gi|24417185|dbj|BAC22544.1| putative 40S ribosomal protein S11 [Oryza sativa Japonica Group]
gi|38568024|emb|CAE05212.3| OSJNBa0070C17.19 [Oryza sativa Japonica Group]
gi|50508299|dbj|BAD30108.1| putative 40S ribosomal protein S11 [Oryza sativa Japonica Group]
gi|125549701|gb|EAY95523.1| hypothetical protein OsI_17369 [Oryza sativa Indica Group]
gi|125600743|gb|EAZ40319.1| hypothetical protein OsJ_24765 [Oryza sativa Japonica Group]
Length = 170
Score = 245 bits (626), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 129/155 (83%), Positives = 131/155 (84%), Gaps = 24/155 (15%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQ---------RYEKRHSNIPAH 96
FTGTVSIRGRI+AGTCHSAKMNRTIIVRRNYLHFVKKYQ RYEKRHSNIPAH
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAH 120
Query: 97 ISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPA 131
+SPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPA
Sbjct: 121 VSPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPA 155
>gi|225430422|ref|XP_002285422.1| PREDICTED: 40S ribosomal protein S11 [Vitis vinifera]
gi|296082102|emb|CBI21107.3| unnamed protein product [Vitis vinifera]
Length = 160
Score = 245 bits (625), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 126/145 (86%), Positives = 128/145 (88%), Gaps = 15/145 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLCSKKGGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRILAGTCHSAKM RTIIVRRNYLH+VKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61 FTGGVSIRGRILAGTCHSAKMMRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIP 130
GDHVIIGQCRPLSKTVRFNVLKVIP
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIP 145
>gi|168018673|ref|XP_001761870.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686925|gb|EDQ73311.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/160 (73%), Positives = 129/160 (80%), Gaps = 16/160 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEK+FLKQP GK G RFWK++GLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKSFLKQPKVFLSTKASSKGKAAGKAGTRFWKNVGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT + KM RTI +RR+YLHFV+KYQRYEKRHSN+ AH+SP FRVKE
Sbjct: 61 FTGDVSIRGRILTGTVNCTKMTRTITIRRDYLHFVRKYQRYEKRHSNLAAHVSPAFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSS-GGAKKAFTAM 144
GD VIIGQCRPLSKTVRFNVLKVIP G+S GG KK FTA+
Sbjct: 121 GDKVIIGQCRPLSKTVRFNVLKVIPMGASDGGNKKVFTAV 160
>gi|38568025|emb|CAE05213.3| OSJNBa0070C17.20 [Oryza sativa Japonica Group]
Length = 185
Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/170 (75%), Positives = 131/170 (77%), Gaps = 39/170 (22%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQ--------------------- 84
FTGTVSIRGRI+AGTCHSAKMNRTIIVRRNYLHFVKKYQ
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNNYGFYLCFFSFFFPISD 120
Query: 85 ---RYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPA 131
RYEKRHSNIPAH+SPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPA
Sbjct: 121 LGCRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPA 170
>gi|338173937|gb|AEI83509.1| 40S ribosomal protein S11 [Wolffia arrhiza]
Length = 142
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 107/127 (84%), Positives = 117/127 (92%)
Query: 18 NRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYL 77
NR+WKSIGLGFK PREAIEGTYIDKKCPFTG VSIRGRIL+G CHSAKMNRTIIVR++Y
Sbjct: 16 NRYWKSIGLGFKVPREAIEGTYIDKKCPFTGNVSIRGRILSGVCHSAKMNRTIIVRKDYP 75
Query: 78 HFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGA 137
H+V+KYQRYEKRHSNIPAH+SPCFRV+EGDHV IGQCRPLSKTVRFNVLKV PAGS G
Sbjct: 76 HYVRKYQRYEKRHSNIPAHVSPCFRVREGDHVTIGQCRPLSKTVRFNVLKVTPAGSGAGG 135
Query: 138 KKAFTAM 144
KKAF++
Sbjct: 136 KKAFSSF 142
>gi|168006825|ref|XP_001756109.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168010400|ref|XP_001757892.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168026441|ref|XP_001765740.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682917|gb|EDQ69331.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690769|gb|EDQ77134.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692619|gb|EDQ78975.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 231 bits (590), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 118/160 (73%), Positives = 129/160 (80%), Gaps = 16/160 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEK+FLKQP GK G RFWK++GLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKSFLKQPKVFLSTKASAKGKAAGKAGTRFWKNVGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT + KM RTI +RR+YLHFV+KYQRYEKRHSN+ AH+SP FRVKE
Sbjct: 61 FTGDVSIRGRILTGTVNCTKMTRTITIRRDYLHFVRKYQRYEKRHSNLAAHVSPAFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSS-GGAKKAFTAM 144
GD VIIGQCRPLSKTVRFNVLKVIP G+S GG KK FTA+
Sbjct: 121 GDKVIIGQCRPLSKTVRFNVLKVIPMGASDGGNKKVFTAV 160
>gi|302802047|ref|XP_002982779.1| hypothetical protein SELMODRAFT_268639 [Selaginella moellendorffii]
gi|302818514|ref|XP_002990930.1| hypothetical protein SELMODRAFT_272177 [Selaginella moellendorffii]
gi|300141261|gb|EFJ07974.1| hypothetical protein SELMODRAFT_272177 [Selaginella moellendorffii]
gi|300149369|gb|EFJ16024.1| hypothetical protein SELMODRAFT_268639 [Selaginella moellendorffii]
Length = 160
Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 116/159 (72%), Positives = 129/159 (81%), Gaps = 16/159 (10%)
Query: 1 MAEQTEKAFLKQ-----PGKGG----------NRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTE+AFLKQ GK +RFWK++GLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTERAFLKQHKVFPLGKTSGKKKRPGKGGSRFWKNVGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FT VSIRGRIL GT + KM R+IIVRR+YLH+VKKYQRYEKRHSN+ AH+SPCFRVKE
Sbjct: 61 FTSDVSIRGRILTGTVATTKMTRSIIVRRDYLHYVKKYQRYEKRHSNVAAHVSPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSS-GGAKKAFTA 143
GD VI+GQCRPLSKT+RFNVLKVIP G+S GGAKK FTA
Sbjct: 121 GDKVILGQCRPLSKTIRFNVLKVIPRGASDGGAKKVFTA 159
>gi|255075543|ref|XP_002501446.1| ribosomal protein [Micromonas sp. RCC299]
gi|226516710|gb|ACO62704.1| ribosomal protein [Micromonas sp. RCC299]
Length = 158
Score = 225 bits (573), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 109/157 (69%), Positives = 126/157 (80%), Gaps = 17/157 (10%)
Query: 2 AEQTEKAFLKQ---------------PGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
AEQTEKA+ KQ PGK G R++K++GLGFKTPREAIEGTYIDKKCPF
Sbjct: 3 AEQTEKAYQKQLGVNVGFGPKGKKARPGKNGTRYYKNVGLGFKTPREAIEGTYIDKKCPF 62
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
TG VSIRGRIL G + KMNRT+I+R +YLH++KKYQRYEKRH+N+PAHISPCFRVKEG
Sbjct: 63 TGNVSIRGRILTGLVKTHKMNRTLIMRMDYLHYIKKYQRYEKRHTNLPAHISPCFRVKEG 122
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTA 143
D V++GQCRPLSKTVRFNVLKVIP+GS G K+F A
Sbjct: 123 DTVVVGQCRPLSKTVRFNVLKVIPSGSKSG--KSFAA 157
>gi|159490006|ref|XP_001702980.1| ribosomal protein S11, component of cytosolic 80S ribosome and 40S
small subunit [Chlamydomonas reinhardtii]
gi|158270887|gb|EDO96718.1| ribosomal protein S11 [Chlamydomonas reinhardtii]
Length = 156
Score = 224 bits (572), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 113/158 (71%), Positives = 125/158 (79%), Gaps = 16/158 (10%)
Query: 1 MAEQTEKAFLKQ--------------PGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MA+QTE+AF KQ PGK G+RF+K IGLGFKTP+EAIEG YIDKKCPF
Sbjct: 1 MADQTERAFQKQFGVTGCFKSKEKKAPGKSGHRFYKQIGLGFKTPKEAIEGHYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
TG VSIRGRIL G S KMNRTIIVRR+YLHFVKKY RYEKRH NI AHISPCFRV+EG
Sbjct: 61 TGNVSIRGRILTGYVKSTKMNRTIIVRRDYLHFVKKYGRYEKRHRNISAHISPCFRVREG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
D V+IGQCRPLSKTVRFNVL+V P+GSS AKK F++
Sbjct: 121 DSVVIGQCRPLSKTVRFNVLRVTPSGSS--AKKGFSSF 156
>gi|145347946|ref|XP_001418420.1| Ribosomal protein S11, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
gi|144578649|gb|ABO96713.1| Ribosomal protein S11, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
Length = 158
Score = 224 bits (571), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 109/157 (69%), Positives = 123/157 (78%), Gaps = 17/157 (10%)
Query: 2 AEQTEKAFLKQ---------------PGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
AEQ E+AF KQ PGKGGNR++K++GLGFKTPREAIEGTYIDKKCPF
Sbjct: 3 AEQHERAFQKQLGVNVGFASATKKKTPGKGGNRYYKNVGLGFKTPREAIEGTYIDKKCPF 62
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
TG VSIRGRIL G S KMNRTI++R +YLHF++KYQRYEKRH+NI AHISPCFR EG
Sbjct: 63 TGNVSIRGRILTGVVKSTKMNRTIVMRMDYLHFIRKYQRYEKRHTNISAHISPCFRCNEG 122
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTA 143
D V++GQCRPLSKTVRFN LKVIP+GS G KAF A
Sbjct: 123 DKVVVGQCRPLSKTVRFNTLKVIPSGSKAG--KAFVA 157
>gi|384245271|gb|EIE18766.1| ribosomal protein S11 component of cytosolic 80S ribosome and 40S
small subunit [Coccomyxa subellipsoidea C-169]
Length = 156
Score = 224 bits (571), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 110/158 (69%), Positives = 124/158 (78%), Gaps = 16/158 (10%)
Query: 1 MAEQTEKAFLKQ--------------PGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MA+QTE+AF KQ PGK G R+WK++GLGFKTP+EAIEGTYIDKKCPF
Sbjct: 1 MADQTERAFQKQLGVNIGFKKAAKKIPGKFGQRYWKNVGLGFKTPKEAIEGTYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
TG VSIRGRIL+G S KMNRTIIVRRNY H++KKY RYEKRH+NI H+SPCFRV +G
Sbjct: 61 TGNVSIRGRILSGIVRSTKMNRTIIVRRNYAHYIKKYARYEKRHTNIAVHLSPCFRVHDG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
D VI GQCRPLSKTVRFNVL+VIPAGSS +KK FT
Sbjct: 121 DTVIFGQCRPLSKTVRFNVLRVIPAGSS--SKKGFTGF 156
>gi|307102457|gb|EFN50731.1| hypothetical protein CHLNCDRAFT_37706 [Chlorella variabilis]
Length = 157
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/158 (68%), Positives = 128/158 (81%), Gaps = 15/158 (9%)
Query: 1 MAEQTEKAFLKQ--------------PGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MA+QTE+AF +Q GKGG R++K++GLGF+TP+EAIEG YID KCPF
Sbjct: 1 MADQTERAFQRQLAVQRGYNKPAKNIVGKGGKRWYKNVGLGFRTPKEAIEGNYIDHKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
TG VSIRGRILAG S KMNRTI++RR+YLHF+KKYQRYEKRH+NI AHISPCFR EG
Sbjct: 61 TGNVSIRGRILAGKVKSTKMNRTIVMRRDYLHFIKKYQRYEKRHTNISAHISPCFRCNEG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
D+VIIGQCRPLSKTVRFNVL+VIPAG +GG+KK+F A
Sbjct: 121 DNVIIGQCRPLSKTVRFNVLRVIPAG-AGGSKKSFGAF 157
>gi|302832668|ref|XP_002947898.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox
carteri f. nagariensis]
gi|300266700|gb|EFJ50886.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox
carteri f. nagariensis]
Length = 156
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/158 (69%), Positives = 125/158 (79%), Gaps = 16/158 (10%)
Query: 1 MAEQTEKAFLKQ--------------PGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MA+QTE+AF KQ PGK G+R++K IGLGFKTP+EAIEG YIDKKCPF
Sbjct: 1 MADQTERAFQKQFGVTGCFKSKEKKAPGKSGHRYYKQIGLGFKTPKEAIEGHYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
TG VSIRGRIL+G S KMNRTIIVRR+YLH+VKKY RYEKRH NI AH+SPCFRVKEG
Sbjct: 61 TGNVSIRGRILSGVVKSTKMNRTIIVRRDYLHYVKKYGRYEKRHRNIAAHVSPCFRVKEG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
D V++GQCRPLSKTVRFNVL+V P GSS AKK F++
Sbjct: 121 DSVVVGQCRPLSKTVRFNVLRVTPQGSS--AKKGFSSF 156
>gi|303280375|ref|XP_003059480.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459316|gb|EEH56612.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 156
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 107/155 (69%), Positives = 122/155 (78%), Gaps = 15/155 (9%)
Query: 2 AEQTEKAFLKQ-------------PGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTG 48
AEQTEKA+ KQ PGK G R++KS+GLGFKTPREAIEGTYIDKKCPFTG
Sbjct: 3 AEQTEKAYQKQLGVNAGCSIKNKAPGKAGTRYYKSVGLGFKTPREAIEGTYIDKKCPFTG 62
Query: 49 TVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDH 108
VSIRGRIL GT S KM RT+I+R +YLH+++KYQRYEKRH+NI AHISPCFR EGD
Sbjct: 63 NVSIRGRILTGTVKSYKMKRTLIMRMDYLHYIQKYQRYEKRHTNIAAHISPCFRCFEGDT 122
Query: 109 VIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTA 143
V++GQCRPLSKTVRFN LKVIP+GS G K+F A
Sbjct: 123 VVVGQCRPLSKTVRFNTLKVIPSGSKAG--KSFAA 155
>gi|89242341|gb|ABD64589.1| 40S ribosomal protein S11 [Chlamydomonas sp. ICE-L]
Length = 155
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 108/158 (68%), Positives = 123/158 (77%), Gaps = 17/158 (10%)
Query: 1 MAEQTEKAFLKQ--------------PGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MAEQ EKA+ KQ PGKGG+RF+KS+GLGFKTP+ AIEGTYIDKKCPF
Sbjct: 1 MAEQNEKAYQKQLGVTAGFKVKDKKAPGKGGHRFYKSVGLGFKTPQSAIEGTYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
TG VSIRGRIL GT S KM RTI+VRR+YLHFVKKY RYEKRHSN+ AH SPCFRVK+G
Sbjct: 61 TGDVSIRGRILTGTVKSTKMTRTIVVRRDYLHFVKKYARYEKRHSNLSAHCSPCFRVKDG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
D V++GQCRPL+KTVRFNVLK I +S +KKAF+
Sbjct: 121 DTVVVGQCRPLTKTVRFNVLKHI---ASSASKKAFSGF 155
>gi|1173222|sp|P42756.1|RS11_DUNTE RecName: Full=40S ribosomal protein S11
gi|534959|emb|CAA46835.1| ribosomal protein S11 [Dunaliella tertiolecta]
Length = 157
Score = 218 bits (554), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 107/159 (67%), Positives = 127/159 (79%), Gaps = 17/159 (10%)
Query: 1 MAEQTEKAFLKQ--------------PGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MAEQTEKAF KQ PGK G+RF+K++GL FKTP+EAI+G Y+DKKCPF
Sbjct: 1 MAEQTEKAFQKQVGVTGCFKSKEKKAPGKSGHRFFKNVGLNFKTPKEAIDGNYVDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
TG VSIRGRIL G S+KM RTIIVRR+YLHF+ KY RYEKRH+NIPAH+SPCFRV++G
Sbjct: 61 TGNVSIRGRILTGVVKSSKMMRTIIVRRDYLHFIPKYARYEKRHTNIPAHVSPCFRVRDG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIP-AGSSGGAKKAFTAM 144
D VIIGQCRPLSKT+RFNVL+VIP AG++G KK+F+
Sbjct: 121 DTVIIGQCRPLSKTIRFNVLRVIPQAGATG--KKSFSGF 157
>gi|449441890|ref|XP_004138715.1| PREDICTED: 40S ribosomal protein S11-3-like isoform 1 [Cucumis
sativus]
gi|449493332|ref|XP_004159258.1| PREDICTED: 40S ribosomal protein S11-3-like isoform 1 [Cucumis
sativus]
Length = 165
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/130 (85%), Positives = 114/130 (87%), Gaps = 15/130 (11%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRILAGTCHSAKM RTIIVRRNYLH+VKKYQRYEKRHSNIPAHI+PCFRVKE
Sbjct: 61 FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHIAPCFRVKE 120
Query: 106 GDHVIIGQCR 115
GDHVIIGQCR
Sbjct: 121 GDHVIIGQCR 130
>gi|356494875|ref|XP_003516308.1| PREDICTED: 40S ribosomal protein S11-like [Glycine max]
Length = 110
Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 100/110 (90%), Positives = 104/110 (94%)
Query: 35 IEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIP 94
+ GTYIDKKCPFTG VSIRGRILAGTCHSAKM+RTIIVRRNYLHF+KKYQRYEKRHSNIP
Sbjct: 1 MSGTYIDKKCPFTGNVSIRGRILAGTCHSAKMSRTIIVRRNYLHFIKKYQRYEKRHSNIP 60
Query: 95 AHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
AHISPCFRVKEGDHVIIGQCRP+SKTVRFNVLKVIP GSS GAKK FT M
Sbjct: 61 AHISPCFRVKEGDHVIIGQCRPISKTVRFNVLKVIPGGSSSGAKKGFTGM 110
>gi|296424672|ref|XP_002841871.1| 40S ribosomal protein S11 [Tuber melanosporum Mel28]
gi|295638121|emb|CAZ86062.1| unnamed protein product [Tuber melanosporum]
Length = 161
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/156 (62%), Positives = 118/156 (75%), Gaps = 17/156 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKGG R++K +GLGFKTP+ AIEGTYIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLASKTRPAKRRVGKGGRRWYKDVGLGFKTPKTAIEGTYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RT+++RR+YLH++ KYQRYEKRH NI AH+SP FRV+E
Sbjct: 65 FTGLVSIRGRILTGTVISTKMHRTLVIRRDYLHYIPKYQRYEKRHKNISAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V +GQCRPLSKTVRFNVL+V+P +G KAF
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKGVKAF 158
>gi|46107576|ref|XP_380847.1| hypothetical protein FG00671.1 [Gibberella zeae PH-1]
Length = 157
Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 97/157 (61%), Positives = 118/157 (75%), Gaps = 17/157 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
M Q+E+AF KQP GKGG R++K +GLGF+TP+ AIEG+YIDKKCP
Sbjct: 1 MTVQSERAFQKQPHIFQNSKTKTKSTRPGKGGRRWYKDVGLGFRTPKTAIEGSYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RTII+RR YLHF++KY RYEKRH N+ AH+SP FRV+E
Sbjct: 61 FTGLVSIRGRILTGTVVSTKMHRTIIIRREYLHFIQKYSRYEKRHKNVAAHVSPAFRVQE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V +GQCRPLSKTVRFNVL+V+P +G + K F+
Sbjct: 121 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKSVKKFS 155
>gi|440635538|gb|ELR05457.1| 40S ribosomal protein S11 [Geomyces destructans 20631-21]
Length = 161
Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 98/157 (62%), Positives = 117/157 (74%), Gaps = 17/157 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKGG R++K +GLGF+TP+ AIEGTYIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLNSKVKAKSARAGKGGRRWYKDVGLGFRTPKNAIEGTYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
F G VSIRGRIL GT S KM+RT+I+RR YLHFV KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FVGQVSIRGRILTGTVVSTKMHRTLIIRREYLHFVPKYARYEKRHKNLAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V +GQCRPLSKTVRFNVL+V+P +G A KAF+
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKAFS 159
>gi|315041695|ref|XP_003170224.1| 40S ribosomal protein S11 [Arthroderma gypseum CBS 118893]
gi|311345258|gb|EFR04461.1| 40S ribosomal protein S11 [Arthroderma gypseum CBS 118893]
Length = 161
Score = 201 bits (511), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 117/156 (75%), Gaps = 17/156 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AFLKQP GKGG R++K +GLGF+TP+ AIEG YIDKKCP
Sbjct: 5 LTVQSERAFLKQPHIFTNAKVKSKSKAVGKGGRRWYKDVGLGFRTPKTAIEGNYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RT+++RR YLH++ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FTGQVSIRGRILTGTVVSTKMHRTLVIRREYLHYIPKYSRYEKRHKNLAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V +GQCRPLSKTVRFNVL+V+P +G A KAF
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKAF 158
>gi|242800551|ref|XP_002483612.1| 40S ribosomal protein S11 [Talaromyces stipitatus ATCC 10500]
gi|218716957|gb|EED16378.1| 40S ribosomal protein S11 [Talaromyces stipitatus ATCC 10500]
Length = 161
Score = 201 bits (511), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 97/157 (61%), Positives = 118/157 (75%), Gaps = 17/157 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKGG R++K +GLGF+TP+ AIEGTYIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFANTKTKAKSKRVGKGGRRWYKDVGLGFRTPKNAIEGTYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RT+I+RR YLH+V KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FTGLVSIRGRILTGTVVSTKMHRTLIIRREYLHYVPKYDRYEKRHKNLAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V +GQCRPLSKTVRFNVL+V+P +G A K+F+
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKSFS 159
>gi|453089249|gb|EMF17289.1| 40S ribosomal protein S11 [Mycosphaerella populorum SO2202]
Length = 161
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/157 (63%), Positives = 115/157 (73%), Gaps = 17/157 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKGG R++K +GLGF+TP+ AIEG YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLNSKSQKKSTRVGKGGRRWYKDVGLGFRTPKTAIEGQYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT SAKM+RTII+RR YLHFV KY RYEKRH N+ AH+SP FRV E
Sbjct: 65 FTGLVSIRGRILTGTVVSAKMHRTIIIRREYLHFVPKYSRYEKRHKNLAAHVSPAFRVSE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V +GQCRPLSKTVRFNVL+V+P +G K FT
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKQVKQFT 159
>gi|358390931|gb|EHK40336.1| hypothetical protein TRIATDRAFT_302714 [Trichoderma atroviride IMI
206040]
Length = 161
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/157 (61%), Positives = 118/157 (75%), Gaps = 17/157 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKGG R++K +GLGF+TP+ AIEG+YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLNSKTKTKSARPGKGGRRWYKDVGLGFRTPKAAIEGSYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRIL GT S KM+RT+I+RR YLHF+ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FTGTVSIRGRILTGTVVSTKMHRTVIIRREYLHFIPKYSRYEKRHKNLAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V +GQCRPLSKT+RFNVL+V+P +G A K F+
Sbjct: 125 GDQVTVGQCRPLSKTIRFNVLRVLP--RTGKAVKKFS 159
>gi|302416045|ref|XP_003005854.1| 40S ribosomal protein S11 [Verticillium albo-atrum VaMs.102]
gi|261355270|gb|EEY17698.1| 40S ribosomal protein S11 [Verticillium albo-atrum VaMs.102]
Length = 160
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/156 (62%), Positives = 117/156 (75%), Gaps = 16/156 (10%)
Query: 1 MAEQTEKAFLKQ--------------PGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
+ Q+E+AF KQ PGKGG R++K +GLGF+TP+ AIEGTYIDKKCPF
Sbjct: 5 LTVQSERAFQKQGIFLNQKTKAKSTRPGKGGRRWYKDVGLGFRTPKTAIEGTYIDKKCPF 64
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
TG VSIRGRIL GT S KM+RT+I+RR YLHF+ KY RYEKRH N+ AH+SP FRV+EG
Sbjct: 65 TGQVSIRGRILTGTVVSTKMHRTLIIRREYLHFIPKYARYEKRHKNLAAHVSPAFRVEEG 124
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
D V +GQCRPLSKTVRFNVL+V+P +G A K F+
Sbjct: 125 DQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKKFS 158
>gi|385301869|gb|EIF46030.1| 40s ribosomal protein s11 [Dekkera bruxellensis AWRI1499]
Length = 157
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 93/148 (62%), Positives = 115/148 (77%), Gaps = 10/148 (6%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q+E+A+LKQP K R++K IGLGFKTP+ AIEGTYIDKKCPFTG +
Sbjct: 5 LTVQSERAYLKQPHIYSNPKSKVSKRAKRWYKDIGLGFKTPKTAIEGTYIDKKCPFTGLI 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRGRIL+GT S KM+RTI++RR+YLH++ KY RYEKRH N+ AH+SPCFRVKEGD+V
Sbjct: 65 SIRGRILSGTVVSTKMHRTIVIRRDYLHYIPKYNRYEKRHKNVAAHVSPCFRVKEGDNVT 124
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAK 138
+GQCRPLSKTVRFNV+KV S+ +K
Sbjct: 125 VGQCRPLSKTVRFNVIKVNTTESTNKSK 152
>gi|358387606|gb|EHK25200.1| hypothetical protein TRIVIDRAFT_79227 [Trichoderma virens Gv29-8]
Length = 161
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/157 (61%), Positives = 118/157 (75%), Gaps = 17/157 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKGG R++K +GLGF+TP+ AIEG+YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLNSKTKTKSVRPGKGGRRWYKDVGLGFRTPKTAIEGSYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RT+I+RR YLH++ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FTGLVSIRGRILTGTVVSTKMHRTVIIRREYLHYIPKYSRYEKRHKNLAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V +GQCRPLSKTVRFNVL+V+P +G A K+FT
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKSFT 159
>gi|296818409|ref|XP_002849541.1| 40S ribosomal protein S11 [Arthroderma otae CBS 113480]
gi|238839994|gb|EEQ29656.1| 40S ribosomal protein S11 [Arthroderma otae CBS 113480]
Length = 161
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 117/156 (75%), Gaps = 17/156 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AFLKQP GKGG R++K +GLGF+TP+ AIEG YIDKKCP
Sbjct: 5 LTVQSERAFLKQPHIFTNSKVKSKSKAVGKGGRRWYKDVGLGFRTPKTAIEGNYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RT+++RR YLH++ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FTGQVSIRGRILTGTVVSTKMHRTLVIRREYLHYIPKYSRYEKRHKNLAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V +GQCRPLSKTVRFNVL+V+P +G A K+F
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKSF 158
>gi|346973900|gb|EGY17352.1| 40S ribosomal protein S11 [Verticillium dahliae VdLs.17]
Length = 160
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/155 (62%), Positives = 116/155 (74%), Gaps = 16/155 (10%)
Query: 1 MAEQTEKAFLKQ--------------PGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
+ Q+E+AF KQ PGKGG R++K +GLGF+TP+ AIEGTYIDKKCPF
Sbjct: 5 LTVQSERAFQKQGIFLNQKTKAKSTRPGKGGRRWYKDVGLGFRTPKTAIEGTYIDKKCPF 64
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
TG VSIRGRIL GT S KM+RT+I+RR YLHF+ KY RYEKRH N+ AH+SP FRV+EG
Sbjct: 65 TGQVSIRGRILTGTVVSTKMHRTLIIRREYLHFIPKYARYEKRHKNLAAHVSPAFRVEEG 124
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
D V +GQCRPLSKTVRFNVL+V+P +G A K F
Sbjct: 125 DQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKKF 157
>gi|154321682|ref|XP_001560156.1| 40S ribosomal protein S11 [Botryotinia fuckeliana B05.10]
gi|347833614|emb|CCD49311.1| similar to 40S ribosomal protein S11 [Botryotinia fuckeliana]
Length = 161
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/157 (61%), Positives = 118/157 (75%), Gaps = 17/157 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKGG R++K +GLGF+TP+ AIEG+YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLNSKSKTKSSRVGKGGRRWYKDVGLGFRTPKTAIEGSYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RT+I+RR YLHF+ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FTGLVSIRGRILTGTVVSTKMHRTLIIRREYLHFIPKYARYEKRHKNLAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V +GQCRPLSKTVRFNVL+V+P +G A K+F+
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKSFS 159
>gi|340517193|gb|EGR47438.1| hypothetical protein TRIREDRAFT_122587 [Trichoderma reesei QM6a]
Length = 161
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/157 (60%), Positives = 118/157 (75%), Gaps = 17/157 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKGG R++K +GLGF+TP+ AIEG+YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLNSKTKTKSTRPGKGGRRWYKDVGLGFRTPKTAIEGSYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RT+I+RR YLH++ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FTGLVSIRGRILTGTVVSTKMHRTVIIRREYLHYIPKYSRYEKRHKNLAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V +GQCRPLSKT+RFNVL+V+P +G A K+FT
Sbjct: 125 GDQVTVGQCRPLSKTIRFNVLRVLP--RTGKAVKSFT 159
>gi|408400080|gb|EKJ79167.1| hypothetical protein FPSE_00642 [Fusarium pseudograminearum CS3096]
Length = 182
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/157 (61%), Positives = 118/157 (75%), Gaps = 17/157 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKGG R++K +GLGF+TP+ AIEG+YIDKKCP
Sbjct: 26 LTVQSERAFQKQPHIFQNSKTKTKSTRPGKGGRRWYKDVGLGFRTPKAAIEGSYIDKKCP 85
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RTII+RR YLHF++KY RYEKRH N+ AH+SP FRV+E
Sbjct: 86 FTGLVSIRGRILTGTVVSTKMHRTIIIRREYLHFIQKYSRYEKRHKNVAAHVSPAFRVQE 145
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V +GQCRPLSKTVRFNVL+V+P +G + K F+
Sbjct: 146 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKSVKKFS 180
>gi|212540860|ref|XP_002150585.1| 40S ribosomal protein S11 [Talaromyces marneffei ATCC 18224]
gi|210067884|gb|EEA21976.1| 40S ribosomal protein S11 [Talaromyces marneffei ATCC 18224]
Length = 161
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 117/156 (75%), Gaps = 17/156 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKGG R++K +GLGF+TP+ AIEG+YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFANGKTKAKSKRVGKGGRRWYKDVGLGFRTPKNAIEGSYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RT+I+RR YLH+V KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FTGLVSIRGRILTGTVVSTKMHRTLIIRREYLHYVPKYDRYEKRHKNLAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V +GQCRPLSKTVRFNVL+V+P +G A K+F
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKSF 158
>gi|302924067|ref|XP_003053807.1| 40S ribosomal protein S11 [Nectria haematococca mpVI 77-13-4]
gi|256734748|gb|EEU48094.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 157
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/157 (61%), Positives = 116/157 (73%), Gaps = 17/157 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKGG R++K +GLGF+TP+ AIEG+YIDKKCP
Sbjct: 1 LTVQSERAFQKQPHIFQNSKARTKSTRPGKGGRRWYKDVGLGFRTPKAAIEGSYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RTII+RR YLHF+ KY RYEKRH N+ AH+SP FRV E
Sbjct: 61 FTGLVSIRGRILTGTVVSTKMHRTIIIRREYLHFIPKYSRYEKRHKNVAAHVSPAFRVME 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V +GQCRPLSKTVRFNVL+V+P +G A K F+
Sbjct: 121 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGNAVKKFS 155
>gi|156045972|ref|XP_001589541.1| 40S ribosomal protein S11 [Sclerotinia sclerotiorum 1980 UF-70]
gi|154693658|gb|EDN93396.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 161
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/157 (61%), Positives = 118/157 (75%), Gaps = 17/157 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKGG R++K +GLGF+TP+ AIEG+YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLNSKSKTKSSKVGKGGRRWYKDVGLGFRTPKTAIEGSYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RT+I+RR YLHF+ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FTGLVSIRGRILTGTVVSTKMHRTLIIRREYLHFIPKYARYEKRHKNLAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V +GQCRPLSKTVRFNVL+V+P +G A K+F+
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKSFS 159
>gi|322712100|gb|EFZ03673.1| 40S ribosomal protein S11 [Metarhizium anisopliae ARSEF 23]
Length = 162
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/157 (61%), Positives = 117/157 (74%), Gaps = 17/157 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKGG R++K +GLGF+TP+ AIEG+YIDKKCP
Sbjct: 6 LTVQSERAFQKQPHIFLNSKTKAKSSRPGKGGRRWYKDVGLGFRTPKTAIEGSYIDKKCP 65
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RT+I+RR YLHF+ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 66 FTGLVSIRGRILTGTVVSTKMHRTLIIRREYLHFIPKYSRYEKRHKNLAAHVSPAFRVEE 125
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V +GQCRPLSKTVRFNVL+V+P +G A K F+
Sbjct: 126 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKKFS 160
>gi|389637127|ref|XP_003716203.1| 40S ribosomal protein S11 [Magnaporthe oryzae 70-15]
gi|291195711|gb|ADD84572.1| Rps11bp [Magnaporthe oryzae]
gi|351642022|gb|EHA49884.1| 40S ribosomal protein S11 [Magnaporthe oryzae 70-15]
gi|440469206|gb|ELQ38323.1| 40S ribosomal protein S11 [Magnaporthe oryzae Y34]
gi|440480978|gb|ELQ61607.1| 40S ribosomal protein S11 [Magnaporthe oryzae P131]
Length = 161
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 97/156 (62%), Positives = 115/156 (73%), Gaps = 17/156 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKGG R++K +GLGF+TP+ AIEG YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLNSKTKVKSARPGKGGRRYYKDVGLGFRTPKTAIEGQYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RT+++RR YLHF+ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FTGLVSIRGRILNGTVISTKMHRTLVIRREYLHFIPKYARYEKRHKNLAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GDHV +GQCRPLSKTVRFNVLKV P S A K+F
Sbjct: 125 GDHVTVGQCRPLSKTVRFNVLKVQP--RSDKAVKSF 158
>gi|367020120|ref|XP_003659345.1| hypothetical protein MYCTH_2088473 [Myceliophthora thermophila ATCC
42464]
gi|347006612|gb|AEO54100.1| hypothetical protein MYCTH_2088473 [Myceliophthora thermophila ATCC
42464]
Length = 161
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 97/157 (61%), Positives = 116/157 (73%), Gaps = 17/157 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKGG R++K +GLGFKTP+ AIEG YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLNSKTKVKSTRPGKGGRRWYKDVGLGFKTPKTAIEGQYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RTII+RR YLH++ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FTGMVSIRGRILTGTVVSTKMHRTIIIRREYLHYIPKYNRYEKRHKNLAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V +GQCRPLSKTVRFNVL+V+P +G A K F+
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKKFS 159
>gi|398399168|ref|XP_003853041.1| 40S ribosomal protein S11 [Zymoseptoria tritici IPO323]
gi|339472923|gb|EGP88017.1| hypothetical protein MYCGRDRAFT_80478 [Zymoseptoria tritici IPO323]
Length = 156
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 90/140 (64%), Positives = 111/140 (79%), Gaps = 10/140 (7%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q+E+AF KQP GKGG R++K +GLGF+TP+ AIEG+YIDKKCPFTG +
Sbjct: 5 LTVQSERAFQKQPHIFLNGKSKVGKGGRRYYKDVGLGFRTPKTAIEGSYIDKKCPFTGLI 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRGRIL GT S KM+RT+++RR YLHFV KY RYEKRH N+ AH+SP FRV++GD V
Sbjct: 65 SIRGRILTGTVVSTKMHRTLVIRREYLHFVPKYSRYEKRHKNLAAHVSPAFRVEDGDQVT 124
Query: 111 IGQCRPLSKTVRFNVLKVIP 130
+GQCRPLSKTVRFNVL+V+P
Sbjct: 125 VGQCRPLSKTVRFNVLRVLP 144
>gi|322694862|gb|EFY86681.1| 40S ribosomal protein S11 [Metarhizium acridum CQMa 102]
Length = 206
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/157 (61%), Positives = 117/157 (74%), Gaps = 17/157 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKGG R++K +GLGF+TP+ AIEG+YIDKKCP
Sbjct: 50 LTVQSERAFQKQPHIFLNSKTKAKSARPGKGGRRWYKDVGLGFRTPKTAIEGSYIDKKCP 109
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RT+I+RR YLHF+ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 110 FTGLVSIRGRILTGTVVSTKMHRTLIIRREYLHFIPKYSRYEKRHKNLAAHVSPAFRVEE 169
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V +GQCRPLSKTVRFNVL+V+P +G A K F+
Sbjct: 170 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKKFS 204
>gi|325184912|emb|CCA19404.1| 40S ribosomal protein S11 putative [Albugo laibachii Nc14]
Length = 159
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 97/143 (67%), Positives = 110/143 (76%), Gaps = 11/143 (7%)
Query: 3 EQTEKAFLKQPG-----------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVS 51
+QTEKAF KQ G K G R +K IGLGFKTP+ AIEG YIDKKCPFT VS
Sbjct: 5 DQTEKAFQKQEGVFLASKKYVNKKKGPRKFKDIGLGFKTPKAAIEGQYIDKKCPFTSNVS 64
Query: 52 IRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVII 111
IRGRIL G S KM RTIIVRR+YLH+VKKY+R+EKRH N+ AH+SPCFRVKEGD V I
Sbjct: 65 IRGRILKGVVLSTKMKRTIIVRRDYLHYVKKYKRFEKRHKNVAAHVSPCFRVKEGDVVTI 124
Query: 112 GQCRPLSKTVRFNVLKVIPAGSS 134
GQCRPL+KTVRFNVL+V+PA +
Sbjct: 125 GQCRPLAKTVRFNVLEVLPASET 147
>gi|407928399|gb|EKG21256.1| Ribosomal protein S17 [Macrophomina phaseolina MS6]
Length = 161
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 116/156 (74%), Gaps = 17/156 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKGG R++K +GLGF+TP+ AIEG+YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHINLVSKSTSKSKRVGKGGRRWYKDVGLGFRTPKTAIEGSYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG +SIRGRIL GT S KM+RT+I+RR YLHF+ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FTGLISIRGRILTGTVVSTKMHRTLIIRREYLHFIPKYSRYEKRHKNLAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V +GQCRPLSKTVRFNVL+V+P +G A K F
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKKF 158
>gi|406864108|gb|EKD17154.1| 40S ribosomal protein S11 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 161
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 95/157 (60%), Positives = 117/157 (74%), Gaps = 17/157 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKGG R++K +GLGF+TP+ AIEG+YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLNSKSKSKSTAVGKGGRRWYKDVGLGFRTPKTAIEGSYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RT+I+RR YLHF+ KY RYEKRH N+ AH+SP FRV++
Sbjct: 65 FTGLVSIRGRILTGTVVSTKMHRTLIIRREYLHFIPKYARYEKRHKNLAAHVSPAFRVED 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V +GQCRPLSKTVRFNVL+V+P +G A K F+
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKQFS 159
>gi|378725912|gb|EHY52371.1| 40S ribosomal protein S11 [Exophiala dermatitidis NIH/UT8656]
Length = 162
Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 97/157 (61%), Positives = 117/157 (74%), Gaps = 18/157 (11%)
Query: 1 MAEQTEKAFLKQP----------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKC 44
+ Q+E+A+ KQP GKGG R++K +GLGF+TP+ AIEG YIDKKC
Sbjct: 5 LTVQSERAYQKQPHIFLNHKSKAAKSRRVGKGGRRWYKDVGLGFRTPKTAIEGHYIDKKC 64
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVK 104
PFTG VSIRGRIL GT S KM+RT+I+RR YLHFV KY RYEKRH+N+ AH+SP FRV+
Sbjct: 65 PFTGMVSIRGRILTGTVVSTKMHRTLIIRREYLHFVPKYARYEKRHTNLAAHVSPAFRVE 124
Query: 105 EGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
EGD V +GQCRPLSKTVRFNVL+V+P +G A KAF
Sbjct: 125 EGDMVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKAF 159
>gi|452989331|gb|EME89086.1| hypothetical protein MYCFIDRAFT_55564 [Pseudocercospora fijiensis
CIRAD86]
Length = 161
Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 115/156 (73%), Gaps = 17/156 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKGG R++K +GLGF+TPR AIEG YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLNSKSKAKSTRVGKGGRRWYKDVGLGFRTPRTAIEGKYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RT+I+RR YLHF+ KY RYEKRH N+ AH+SP FRV++
Sbjct: 65 FTGLVSIRGRILTGTVVSTKMHRTLIIRREYLHFIPKYSRYEKRHKNLAAHVSPAFRVED 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V +GQCRPLSKTVRFNVL+V+P +G A K F
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKKF 158
>gi|3402191|emb|CAA06411.1| 40S ribosomal protein S11 [Cyanophora paradoxa]
Length = 164
Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 117/157 (74%), Gaps = 18/157 (11%)
Query: 3 EQTEKAFLKQPG-----------KGGN-----RFWKSIGLGFKTPREAIEGTYIDKKCPF 46
+Q E+AF KQ KGG R++++IGLGFKTPREAIEG+YIDKKCPF
Sbjct: 5 QQAERAFQKQDAIFIGSKRLLAKKGGPSGKVPRYYRNIGLGFKTPREAIEGSYIDKKCPF 64
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
TG VSIRGRIL G S KM RT++VRR+Y+HF+ KY RYEKRH N PAH SP F V G
Sbjct: 65 TGNVSIRGRILQGVVQSTKMKRTLVVRRDYMHFIPKYNRYEKRHKNFPAHCSPAFIVNPG 124
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIP-AGSSGG-AKKAF 141
D VI+GQCRPLSKTVRFNVLKVIP AGS+GG AKKAF
Sbjct: 125 DTVIVGQCRPLSKTVRFNVLKVIPKAGSTGGQAKKAF 161
>gi|301105230|ref|XP_002901699.1| 40S ribosomal protein S11 [Phytophthora infestans T30-4]
gi|262100703|gb|EEY58755.1| 40S ribosomal protein S11 [Phytophthora infestans T30-4]
gi|348689602|gb|EGZ29416.1| hypothetical protein PHYSODRAFT_353636 [Phytophthora sojae]
gi|348689614|gb|EGZ29428.1| hypothetical protein PHYSODRAFT_353660 [Phytophthora sojae]
Length = 159
Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 110/144 (76%), Gaps = 11/144 (7%)
Query: 2 AEQTEKAFLKQPG-----------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+QTEKA+ KQ G K G RF+K +GLGFKTP+ AIEG Y+DKKCPFTG +
Sbjct: 4 VDQTEKAYQKQQGVFLASKKFAGKKKGPRFYKEVGLGFKTPKSAIEGQYVDKKCPFTGNI 63
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRGRIL G S KM RTIIVRR+YLHFVKKY+R+EKRH N+ AH+SP FRVKEGD V
Sbjct: 64 SIRGRILKGVVLSTKMKRTIIVRRDYLHFVKKYKRFEKRHKNVAAHLSPAFRVKEGDVVT 123
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSS 134
IGQCRPL+KTVRFNVL+V PA +
Sbjct: 124 IGQCRPLAKTVRFNVLEVEPASET 147
>gi|402079205|gb|EJT74470.1| 40S ribosomal protein S11 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 161
Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 91/145 (62%), Positives = 110/145 (75%), Gaps = 15/145 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKGG R++K +GLGF+TP+ AIEG YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLNSKTKVKSARPGKGGRRYYKDVGLGFRTPKNAIEGQYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RT+++RR YLH++ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FTGLVSIRGRILNGTVVSTKMHRTLVIRREYLHYIPKYSRYEKRHKNLAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIP 130
GDHV +GQCRPLSKTVRFNVL+V P
Sbjct: 125 GDHVTVGQCRPLSKTVRFNVLRVTP 149
>gi|367043726|ref|XP_003652243.1| 40S ribosomal protein S11 [Thielavia terrestris NRRL 8126]
gi|346999505|gb|AEO65907.1| hypothetical protein THITE_2113512 [Thielavia terrestris NRRL 8126]
Length = 161
Score = 197 bits (502), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 96/157 (61%), Positives = 116/157 (73%), Gaps = 17/157 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKGG R++K +GLGF+TP+ AIEG YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLNSKTKVKSTRPGKGGRRWYKDVGLGFRTPKTAIEGQYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RTII+RR YLH++ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FTGMVSIRGRILTGTVVSTKMHRTIIIRREYLHYIPKYNRYEKRHKNLAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V +GQCRPLSKTVRFNVL+V+P +G A K F+
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKKFS 159
>gi|361129983|gb|EHL01859.1| putative 40S ribosomal protein S11-B [Glarea lozoyensis 74030]
Length = 161
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/157 (59%), Positives = 117/157 (74%), Gaps = 17/157 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKGG R++K +GLGF+TP+ AI+G+YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLNAKTKAKSRRVGKGGRRWYKDVGLGFRTPKTAIDGSYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RT+++RR YLHF+ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FTGLVSIRGRILTGTVVSTKMHRTLVIRREYLHFIPKYARYEKRHKNLSAHVSPAFRVQE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V +GQCRPLSKTVRFNVL+V+P +G A K F+
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKQFS 159
>gi|340914675|gb|EGS18016.1| 40S ribosomal protein S11-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 161
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 116/156 (74%), Gaps = 17/156 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AFLKQP GKGG R++K +GLGFKTP+ AIEG YIDKKCP
Sbjct: 5 LTVQSERAFLKQPHIFLNSKVKVKSTRPGKGGRRWYKDVGLGFKTPKTAIEGHYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL G S KM+RTII+RR YLH++ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FTGMVSIRGRILTGRVVSTKMHRTIIIRREYLHYIPKYNRYEKRHKNLAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V++GQCRPLSKTVRFNVL+V+P +G + K F
Sbjct: 125 GDMVVVGQCRPLSKTVRFNVLRVLP--RTGKSVKKF 158
>gi|342876807|gb|EGU78363.1| hypothetical protein FOXB_11114 [Fusarium oxysporum Fo5176]
Length = 155
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/131 (69%), Positives = 109/131 (83%), Gaps = 2/131 (1%)
Query: 12 QPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTII 71
+PGKGG R++K +GLGF+TP+ AIEG+YIDKKCPFTG VSIRGRIL GT S KM+RTII
Sbjct: 25 RPGKGGRRWYKDVGLGFRTPKAAIEGSYIDKKCPFTGLVSIRGRILTGTVVSTKMHRTII 84
Query: 72 VRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPA 131
+RR YLHF+ KY RYEKRH N+ AH+SP FRV+EGD V +GQCRPLSKTVRFNVL+V+P
Sbjct: 85 IRREYLHFIPKYSRYEKRHKNVAAHVSPAFRVEEGDQVTVGQCRPLSKTVRFNVLRVLP- 143
Query: 132 GSSGGAKKAFT 142
+G A K F+
Sbjct: 144 -RTGKAVKKFS 153
>gi|429859985|gb|ELA34740.1| 40s ribosomal protein s11 [Colletotrichum gloeosporioides Nara gc5]
Length = 161
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/157 (60%), Positives = 116/157 (73%), Gaps = 17/157 (10%)
Query: 1 MAEQTEKAFLKQ---------------PGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQ PGK G R++K +GLGF+TP+ AIEG+YIDKKCP
Sbjct: 5 LTVQSERAFQKQKGIFLNQKVKAKSARPGKSGRRWYKDVGLGFRTPKTAIEGSYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RT+I+RR YLHF+ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FTGQVSIRGRILTGTVVSTKMHRTLIIRREYLHFIPKYARYEKRHKNLAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V +GQCRPLSKTVRFNVL+V+P +G A K F+
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKKFS 159
>gi|336267140|ref|XP_003348336.1| 40S ribosomal protein S11 [Sordaria macrospora k-hell]
gi|380091988|emb|CCC10256.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 161
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/157 (61%), Positives = 115/157 (73%), Gaps = 17/157 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKGG R++K +GLGF+TP AIEG YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLNSKTKVKSARPGKGGRRWYKDVGLGFRTPAAAIEGQYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RT+I+RR YLHF+ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FTGQVSIRGRILTGTVVSTKMHRTLIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V +GQCRPLSKTVRFNVL+V+P SG + K F+
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RSGKSVKKFS 159
>gi|85115947|ref|XP_964961.1| 40S ribosomal protein S11 [Neurospora crassa OR74A]
gi|28926760|gb|EAA35725.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|336464476|gb|EGO52716.1| hypothetical protein NEUTE1DRAFT_118897 [Neurospora tetrasperma
FGSC 2508]
gi|350296566|gb|EGZ77543.1| hypothetical protein NEUTE2DRAFT_142864 [Neurospora tetrasperma
FGSC 2509]
Length = 161
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/145 (64%), Positives = 110/145 (75%), Gaps = 15/145 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKGG R++K +GLGF+TP AIEG YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLNSKTKVKSARPGKGGRRWYKDVGLGFRTPAAAIEGQYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL+GT S KM+RTII+RR YLHF+ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FTGQVSIRGRILSGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIP 130
GD V +GQCRPLSKTVRFNVL+V+P
Sbjct: 125 GDKVTVGQCRPLSKTVRFNVLRVLP 149
>gi|171687797|ref|XP_001908839.1| hypothetical protein [Podospora anserina S mat+]
gi|170943860|emb|CAP69512.1| unnamed protein product [Podospora anserina S mat+]
Length = 161
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 114/156 (73%), Gaps = 17/156 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKGG R++K +GLGF+TP AIEG YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLNSKTKVKTTRPGKGGRRWYKDVGLGFRTPTAAIEGQYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RTII+RR YLH++ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FTGQVSIRGRILTGTVVSTKMHRTIIIRREYLHYIPKYSRYEKRHKNLAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V +GQCRPLSKTVRFNVL+V+P +G K+F
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKTVKSF 158
>gi|221105406|ref|XP_002158762.1| PREDICTED: 40S ribosomal protein S11-like [Hydra magnipapillata]
Length = 156
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/156 (63%), Positives = 113/156 (72%), Gaps = 18/156 (11%)
Query: 1 MAEQTEKAFLKQPGKGGN--------------RFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MAEQ E+AF KQP N R+ +++GLGFKTPREAIEGTYIDKKCPF
Sbjct: 1 MAEQNERAFQKQPAIFLNKKRVVAKTTKNKELRYVRNVGLGFKTPREAIEGTYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF-RVKE 105
TG VSIRGRIL G S KM RTI++RR+YLHF+KKYQRYEKRH N+ AH+SPCF V
Sbjct: 61 TGNVSIRGRILTGIVKSLKMKRTIVIRRDYLHFIKKYQRYEKRHKNLVAHMSPCFLDVAL 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V +GQCRPLSKT+RFNVLKV S AKK+F
Sbjct: 121 GDLVTVGQCRPLSKTIRFNVLKV---SKSTSAKKSF 153
>gi|118395679|ref|XP_001030186.1| ribosomal protein S17 containing protein [Tetrahymena thermophila]
gi|319443372|pdb|2XZM|Q Chain Q, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 1
gi|319443407|pdb|2XZN|Q Chain Q, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 2
gi|89284480|gb|EAR82523.1| ribosomal protein S17 containing protein [Tetrahymena thermophila
SB210]
gi|315570313|tpg|DAA33975.1| TPA_exp: 40S ribosomal protein rpS11e [Tetrahymena thermophila]
Length = 157
Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 90/154 (58%), Positives = 112/154 (72%), Gaps = 13/154 (8%)
Query: 1 MAEQTEKAFLKQPG-------------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
M Q ++A+ KQ G G R++K+IGLGFKTP+EAIEGTY+DKKCPFT
Sbjct: 1 MDTQIQRAYQKQDGVFLNSKKLLAKKTSAGVRYYKNIGLGFKTPKEAIEGTYVDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
+SIRG+I+ G S KMNRT+I+RR+YLH+V+KY RYEKRH NIP HISPCF VKEGD
Sbjct: 61 SNLSIRGKIIKGLVISTKMNRTVIIRRDYLHYVRKYNRYEKRHRNIPVHISPCFSVKEGD 120
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
++ GQCRP+SKTVRFN L+V+P G +K F
Sbjct: 121 ILVAGQCRPISKTVRFNALQVVPNEIIGSVRKQF 154
>gi|340367959|ref|XP_003382520.1| PREDICTED: 40S ribosomal protein S11-like [Amphimedon
queenslandica]
Length = 158
Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 99/158 (62%), Positives = 117/158 (74%), Gaps = 19/158 (12%)
Query: 1 MAEQTEKAFLKQPGKGGN----------------RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+QTEKA+ KQ G N RF +++GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADQTEKAYQKQKGVFQNSKAVLLGLGKKKGKGQRFVRNVGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL GT S KM RTI++RR+YLH++KKY R+EKRH N+ AH+SPCFR V
Sbjct: 61 PFTGNVSIRGRILTGTVRSMKMKRTIVIRRDYLHYIKKYNRFEKRHKNLSAHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V++GQCRPLSKTVRFNVLKV A S G K+ F
Sbjct: 121 ELGDLVVVGQCRPLSKTVRFNVLKVQKAKS--GKKQFF 156
>gi|310789813|gb|EFQ25346.1| ribosomal protein S17 [Glomerella graminicola M1.001]
Length = 161
Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 94/157 (59%), Positives = 115/157 (73%), Gaps = 17/157 (10%)
Query: 1 MAEQTEKAFLKQ---------------PGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQ PGK G R++K +GLGF+TP AIEG+YIDKKCP
Sbjct: 5 LTVQSERAFQKQKGIFLNQKVKAKSARPGKSGRRWYKDVGLGFRTPATAIEGSYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RT+I+RR YLH++ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FTGQVSIRGRILTGTVVSTKMHRTLIIRREYLHYIPKYARYEKRHKNLAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V +GQCRPLSKTVRFNVL+V+P +G A K F+
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKKFS 159
>gi|254568780|ref|XP_002491500.1| 40S ribosomal protein S11 [Komagataella pastoris GS115]
gi|238031297|emb|CAY69220.1| Protein component of the small (40S) ribosomal subunit
[Komagataella pastoris GS115]
gi|328351990|emb|CCA38389.1| 40S ribosomal protein S11 [Komagataella pastoris CBS 7435]
Length = 155
Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 98/146 (67%), Positives = 111/146 (76%), Gaps = 12/146 (8%)
Query: 4 QTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIR 53
Q+EKAF KQP K R+ K +GLGFKTP+ AIEG+YIDKKCPFTGTVSIR
Sbjct: 8 QSEKAFQKQPHIFTNPKAKANKRTKRWHKDVGLGFKTPKSAIEGSYIDKKCPFTGTVSIR 67
Query: 54 GRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQ 113
G+IL GT S KM+RTII+RR+YLH+V KY RYEKRH N+ AH+SP FRV EGD V +GQ
Sbjct: 68 GKILTGTVISTKMHRTIIIRRDYLHYVPKYNRYEKRHKNVAAHVSPAFRVNEGDLVTVGQ 127
Query: 114 CRPLSKTVRFNVLKVIPAGSSGGAKK 139
CRPLSKTVRFNVLKV PA GG KK
Sbjct: 128 CRPLSKTVRFNVLKVTPA--VGGNKK 151
>gi|400602167|gb|EJP69792.1| 40S ribosomal protein S11 [Beauveria bassiana ARSEF 2860]
Length = 195
Score = 194 bits (493), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 89/145 (61%), Positives = 110/145 (75%), Gaps = 15/145 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GK G R++K +GLGF+TP+ AIEG+YIDKKCP
Sbjct: 39 LTVQSERAFQKQPHIFLNSKTKAKSARPGKNGRRWYKDVGLGFRTPKTAIEGSYIDKKCP 98
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RT+++RR YLHF+ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 99 FTGLVSIRGRILTGTVVSTKMHRTVVIRREYLHFIPKYSRYEKRHKNLAAHVSPAFRVEE 158
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIP 130
GD V +GQCRPLSKT+RFNVL+V+P
Sbjct: 159 GDQVTVGQCRPLSKTIRFNVLRVLP 183
>gi|66811940|ref|XP_640149.1| 40S ribosomal protein S11 [Dictyostelium discoideum AX4]
gi|74854958|sp|Q54S90.1|RS11_DICDI RecName: Full=40S ribosomal protein S11
gi|60468150|gb|EAL66160.1| 40S ribosomal protein S11 [Dictyostelium discoideum AX4]
Length = 155
Score = 194 bits (493), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 98/155 (63%), Positives = 115/155 (74%), Gaps = 14/155 (9%)
Query: 1 MAE-QTEKAFLKQP-------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MA+ Q EKAF KQ GK G R++K+IGLG++TP++AIEGTYIDKKCPF
Sbjct: 1 MADIQAEKAFQKQQVSFKNRFQLKASKGKEGIRYYKNIGLGYRTPKDAIEGTYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
T VSIRG IL GT S KM RT++VRRNYLH++KKY R+EKRHSNIPAH+SP F VKEG
Sbjct: 61 TSDVSIRGAILRGTVISTKMRRTLVVRRNYLHYIKKYNRFEKRHSNIPAHVSPAFNVKEG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
D V IGQCRPLSKTVRFNV+K + +S KAF
Sbjct: 121 DSVTIGQCRPLSKTVRFNVIKHDISAASKKQFKAF 155
>gi|380481811|emb|CCF41628.1| 40S ribosomal protein S11 [Colletotrichum higginsianum]
Length = 161
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/157 (59%), Positives = 115/157 (73%), Gaps = 17/157 (10%)
Query: 1 MAEQTEKAFLKQ---------------PGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQ PGK G R++K +GLGF+TP AIEG+YIDKKCP
Sbjct: 5 LTVQSERAFQKQKGIFLNQKVKAKSARPGKSGRRWYKDVGLGFRTPITAIEGSYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RT+I+RR YLH++ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FTGQVSIRGRILTGTVVSTKMHRTLIIRREYLHYIPKYARYEKRHKNLAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V +GQCRPLSKTVRFNVL+V+P +G A K F+
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKKFS 159
>gi|452846464|gb|EME48396.1| hypothetical protein DOTSEDRAFT_39766 [Dothistroma septosporum
NZE10]
Length = 162
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/146 (61%), Positives = 110/146 (75%), Gaps = 16/146 (10%)
Query: 1 MAEQTEKAFLKQP----------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKC 44
+ Q+E+AF KQP GKGG R++K +GLGF+TP+ AIEG+YIDKKC
Sbjct: 5 LTVQSERAFQKQPHIFTNQKVKSRKTPKVGKGGRRWYKDVGLGFRTPKNAIEGSYIDKKC 64
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVK 104
PFTG VSIRGRIL GT S KM+RT+++RR YLHF+ KY RYEKRH N+ AH+SP FRV
Sbjct: 65 PFTGLVSIRGRILTGTVVSTKMHRTLVIRREYLHFIPKYSRYEKRHKNLAAHVSPAFRVS 124
Query: 105 EGDHVIIGQCRPLSKTVRFNVLKVIP 130
+GD V +GQCRPLSKTVRFNVL+V+P
Sbjct: 125 DGDVVTVGQCRPLSKTVRFNVLRVLP 150
>gi|320586825|gb|EFW99488.1| 40S ribosomal protein s11 [Grosmannia clavigera kw1407]
Length = 161
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/153 (60%), Positives = 113/153 (73%), Gaps = 15/153 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GK G R++K++GLGF+TP+ AIEG+YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLNSKTKVKTSRPGKAGRRWYKNVGLGFRTPKAAIEGSYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RT+I+RR YLH++ KY RYEKRH+N+ AH SP FRV+E
Sbjct: 65 FTGLVSIRGRILTGTVVSTKMHRTLIIRREYLHYIPKYSRYEKRHTNLAAHCSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAK 138
GD V +GQCRPLSKTVRFNVL+V+P G K
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLPRTGKGVKK 157
>gi|363753034|ref|XP_003646733.1| hypothetical protein Ecym_5139 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890369|gb|AET39916.1| hypothetical protein Ecym_5139 [Eremothecium cymbalariae
DBVPG#7215]
Length = 156
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/152 (61%), Positives = 114/152 (75%), Gaps = 12/152 (7%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q E+AF KQP + R++K++GLGFKTP+ AIEG+YIDKKCPFTG V
Sbjct: 5 LTVQAERAFQKQPHIFTNPKAKANRRTKRWYKNVGLGFKTPKTAIEGSYIDKKCPFTGLV 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRG+IL GT S KM+RTII+RR+YLH+V KY RYEKRH N+P H+SP FRVK GD V
Sbjct: 65 SIRGKILTGTVVSTKMHRTIIIRRDYLHYVPKYNRYEKRHKNVPVHVSPAFRVKLGDIVT 124
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
+GQCRP+SKTVRFNVLKV A ++G A K FT
Sbjct: 125 VGQCRPISKTVRFNVLKV--ASAAGKANKQFT 154
>gi|121543849|gb|ABM55589.1| putative ribosomal protein S11 [Maconellicoccus hirsutus]
Length = 152
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/152 (63%), Positives = 112/152 (73%), Gaps = 14/152 (9%)
Query: 1 MAEQTEKAFLKQPG----------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
MA+Q E+AF KQP K R++K +GLGFKTPREAIEGTYIDKKCPFTG V
Sbjct: 1 MADQNERAFQKQPTVFLNRKFNTKKKKLRYYKDVGLGFKTPREAIEGTYIDKKCPFTGNV 60
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
SIRGRIL G KM RTI++RR+YLH++KKY R+EKRH N+ H+SPCFR V+ GD V
Sbjct: 61 SIRGRILTGVVQKMKMQRTIVIRRDYLHYIKKYNRFEKRHKNMSVHLSPCFRDVEIGDVV 120
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 121 TIGECRPLSKTVRFNVLKVTKG---QGAKKSF 149
>gi|126133655|ref|XP_001383352.1| 40S ribosomal protein S11 [Scheffersomyces stipitis CBS 6054]
gi|126095501|gb|ABN65323.1| ribosomal protein S17 [Scheffersomyces stipitis CBS 6054]
Length = 155
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/143 (63%), Positives = 109/143 (76%), Gaps = 10/143 (6%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q+E+AF KQP + R++K IGLGFKTP+ AIEGTYIDKKCPF GTV
Sbjct: 5 LTVQSERAFQKQPHIFTNPKAKANRKTKRWYKDIGLGFKTPKTAIEGTYIDKKCPFVGTV 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRG+IL GT S KM+RTII+RR+YLH+V KY RYEKRH N+ AH+SP FRV+EGD V
Sbjct: 65 SIRGKILTGTVVSTKMHRTIIIRRDYLHYVPKYNRYEKRHKNVAAHVSPAFRVQEGDVVT 124
Query: 111 IGQCRPLSKTVRFNVLKVIPAGS 133
+GQCRP+SKTVRFNV+KV A S
Sbjct: 125 VGQCRPISKTVRFNVIKVAAAAS 147
>gi|452819126|gb|EME26213.1| 40S ribosomal protein S11e [Galdieria sulphuraria]
Length = 156
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 97/156 (62%), Positives = 118/156 (75%), Gaps = 12/156 (7%)
Query: 1 MAE-QTEKAFLKQPG----------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGT 49
MA+ QTE+AF KQ K R++K+IGLG KTP+EAIEG YIDKKCPFTG
Sbjct: 1 MADPQTERAFQKQDAISLKQIAGVSKKNARWYKNIGLGIKTPKEAIEGDYIDKKCPFTGN 60
Query: 50 VSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHV 109
VSIRGRIL GT S KM RT+IVRR+YLH+V KY+R+EKRH NIPAH SPCFRV+EGD V
Sbjct: 61 VSIRGRILRGTVVSTKMKRTVIVRRDYLHWVSKYKRFEKRHRNIPAHCSPCFRVREGDLV 120
Query: 110 IIGQCRPLSKTVRFNVLKVIPAG-SSGGAKKAFTAM 144
IG+CRPLSKTVRFN+L++ A +S KK ++++
Sbjct: 121 TIGECRPLSKTVRFNILRIDRAAPASEAGKKIYSSI 156
>gi|115390685|ref|XP_001212847.1| 40S ribosomal protein S11 [Aspergillus terreus NIH2624]
gi|114193771|gb|EAU35471.1| 40S ribosomal protein S11 [Aspergillus terreus NIH2624]
Length = 160
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 94/155 (60%), Positives = 114/155 (73%), Gaps = 16/155 (10%)
Query: 1 MAEQTEKAFLKQP--------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
+ Q+E+AF KQP G G R++K +GLGF+TP+ AIEG+YIDKKCPF
Sbjct: 5 LTVQSERAFQKQPHIFNNPKTQAKSKKGAQGRRWYKDVGLGFRTPKTAIEGSYIDKKCPF 64
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
TG VSIRGRIL G S KM+RTII+RR YLH+V KY RYEKRH N+ AH+SP FRV+EG
Sbjct: 65 TGMVSIRGRILTGRVVSTKMHRTIIIRREYLHYVPKYNRYEKRHKNLAAHVSPAFRVEEG 124
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
D V +GQCRPLSKTVRFNVL+V+P +G A K+F
Sbjct: 125 DWVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKSF 157
>gi|327298525|ref|XP_003233956.1| 40S ribosomal protein S11 [Trichophyton rubrum CBS 118892]
gi|326464134|gb|EGD89587.1| 40S ribosomal protein S11 [Trichophyton rubrum CBS 118892]
gi|326474651|gb|EGD98660.1| 40S ribosomal protein S11 [Trichophyton tonsurans CBS 112818]
Length = 161
Score = 191 bits (485), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 92/156 (58%), Positives = 114/156 (73%), Gaps = 17/156 (10%)
Query: 1 MAEQTEKAFLKQPGKGGN---------------RFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF+KQP N R++K +GLGF+TP+ AIEG YIDKKCP
Sbjct: 5 LTVQSERAFMKQPHIFTNSKVKSKSKSVGKGGRRWYKDVGLGFRTPKTAIEGNYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RT+++RR YLH++ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FTGQVSIRGRILTGTVVSTKMHRTLVIRREYLHYIPKYSRYEKRHKNLAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V +GQCRPLSKTVRFNVL+V+P +G A KAF
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKAF 158
>gi|169620840|ref|XP_001803831.1| hypothetical protein SNOG_13626 [Phaeosphaeria nodorum SN15]
gi|160704116|gb|EAT79073.2| hypothetical protein SNOG_13626 [Phaeosphaeria nodorum SN15]
Length = 159
Score = 191 bits (485), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 92/155 (59%), Positives = 113/155 (72%), Gaps = 15/155 (9%)
Query: 1 MAEQTEKAFLKQP-------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
+ Q+E+A+ KQP R++K +GLGF+TP+ AIEGTYIDKKCPFT
Sbjct: 5 LTVQSERAYQKQPHIFLNHKVGGPRKNTRNRRWYKDVGLGFRTPKNAIEGTYIDKKCPFT 64
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
G VSIRGRIL GT S KM+RT+I+RR YLHF+ KY RYEKRH N+ AH+SP FRV+ GD
Sbjct: 65 GMVSIRGRILTGTVMSTKMHRTLIIRREYLHFIPKYSRYEKRHKNLAAHVSPAFRVEPGD 124
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
V++GQCRPLSKTVRFNVL+V+P SG A K F+
Sbjct: 125 QVVVGQCRPLSKTVRFNVLRVLP--RSGKAAKQFS 157
>gi|156403003|ref|XP_001639879.1| predicted protein [Nematostella vectensis]
gi|156227010|gb|EDO47816.1| predicted protein [Nematostella vectensis]
Length = 159
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 112/156 (71%), Gaps = 15/156 (9%)
Query: 1 MAEQTEKAFLKQP--------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MAEQTE+A+ KQ K RF +++GLGFKTP++AIEGTYIDKKCPF
Sbjct: 1 MAEQTERAYQKQAPIFQNRKRVLGQVTKKKDLRFVRNVGLGFKTPKDAIEGTYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKE 105
TG VSIRGRIL G C S KM RTII+RR+YLH++KKY R+EKRH N+ AH SPCFR +
Sbjct: 61 TGNVSIRGRILTGICRSMKMKRTIIIRRDYLHYIKKYNRFEKRHKNLAAHCSPCFRDIAL 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD + +GQCRPLSKTVRFNVLKV S+ KK F
Sbjct: 121 GDLITVGQCRPLSKTVRFNVLKVSKGKSTMKGKKEF 156
>gi|50303043|ref|XP_451459.1| 40S ribosomal protein S11 [Kluyveromyces lactis NRRL Y-1140]
gi|49640590|emb|CAH03047.1| KLLA0A10483p [Kluyveromyces lactis]
Length = 156
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/151 (60%), Positives = 115/151 (76%), Gaps = 12/151 (7%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q+E+AF KQP + R++K++GLGFKTP+ AIEG+YIDKKCPFTG V
Sbjct: 5 LTVQSERAFQKQPHIFTNPKAKANRKTKRWYKNVGLGFKTPKTAIEGSYIDKKCPFTGLV 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRG+IL GT S +M+RTI++RR+YLH+V KY RYEKRH N+PAH+SP FRV+ GD V
Sbjct: 65 SIRGKILTGTVVSTRMHRTIVIRRDYLHYVPKYNRYEKRHKNVPAHVSPAFRVQVGDIVT 124
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+GQCRP+SKTVRFNVLKV A ++G A K F
Sbjct: 125 VGQCRPISKTVRFNVLKV--ASATGKANKQF 153
>gi|406607308|emb|CCH41363.1| 40S ribosomal protein S11 [Wickerhamomyces ciferrii]
Length = 156
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/151 (62%), Positives = 113/151 (74%), Gaps = 12/151 (7%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q+E+AF KQP + R++K +GLGF+TP+ AIEG+YIDKKCPF GTV
Sbjct: 5 LTVQSERAFQKQPHIFTNPKAKANRRTKRWFKDVGLGFRTPKAAIEGSYIDKKCPFVGTV 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRG+IL GT S KM+RTII+RR+YLH+V KY RYEKRH N+ AH+SP FRV+EGD V
Sbjct: 65 SIRGKILTGTVVSTKMHRTIIIRRDYLHYVPKYNRYEKRHKNVAAHVSPAFRVEEGDLVT 124
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+GQCRPLSKTVRFNVLKV AG G A K F
Sbjct: 125 VGQCRPLSKTVRFNVLKVQTAG--GKANKKF 153
>gi|392576803|gb|EIW69933.1| hypothetical protein TREMEDRAFT_38602 [Tremella mesenterica DSM
1558]
Length = 154
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/154 (63%), Positives = 111/154 (72%), Gaps = 16/154 (10%)
Query: 1 MAEQTEKAFLKQP------GKGG-------NRFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MAEQTEKAF KQ +G R++K +GLGFKTP+EAI GTYIDKKCPFT
Sbjct: 1 MAEQTEKAFRKQKIFQNAKSRGTARLHAKTKRWYKDVGLGFKTPQEAINGTYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
G VSIRGRIL G HS KM TII+RR YLHFV KY+RYEKRH N+ AH SP FRV++GD
Sbjct: 61 GEVSIRGRILTGVVHSTKMTNTIIIRREYLHFVPKYRRYEKRHKNLAAHCSPAFRVEQGD 120
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V +GQCRPLSKTVRFNVL+V + A KAF
Sbjct: 121 TVTVGQCRPLSKTVRFNVLRV---SKNQAAAKAF 151
>gi|253742506|gb|EES99335.1| Ribosomal protein S11 [Giardia intestinalis ATCC 50581]
Length = 199
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/134 (67%), Positives = 108/134 (80%), Gaps = 2/134 (1%)
Query: 9 FLKQPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNR 68
FL++ RF+KSIG+G+ TP AI GTYIDKKCPFTG VSIRGRIL G HSAKM R
Sbjct: 66 FLRKDNARCLRFYKSIGMGYHTPITAINGTYIDKKCPFTGNVSIRGRILRGVVHSAKMQR 125
Query: 69 TIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
+IIVRR+YLHFV+KY+RYE+RH ++ AH+SPCFRVKEGD V IG+CRPLSKT+RFNV+KV
Sbjct: 126 SIIVRRDYLHFVQKYKRYERRHKHVAAHLSPCFRVKEGDIVTIGECRPLSKTIRFNVIKV 185
Query: 129 IPAGSSGGAKKAFT 142
P S AKK F+
Sbjct: 186 EPV--SEAAKKRFS 197
>gi|238484901|ref|XP_002373689.1| 40S ribosomal protein S11 [Aspergillus flavus NRRL3357]
gi|317140866|ref|XP_003189305.1| 40S ribosomal protein S11 [Aspergillus oryzae RIB40]
gi|220701739|gb|EED58077.1| 40S ribosomal protein S11 [Aspergillus flavus NRRL3357]
Length = 160
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/156 (60%), Positives = 114/156 (73%), Gaps = 16/156 (10%)
Query: 1 MAEQTEKAFLKQPG--------------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
+ Q+E+AF KQP G R++K +GLGF+TP+ AIEGTYIDKKCPF
Sbjct: 5 LTVQSERAFQKQPHIFNNPKTLAKSKKVGQGRRWYKDVGLGFRTPKTAIEGTYIDKKCPF 64
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
TG VSIRGRIL G S KM+RTI++RR YLH+V KY RYEKRH N+ AH+SP FRV+EG
Sbjct: 65 TGMVSIRGRILTGRVVSTKMHRTIVIRREYLHYVPKYNRYEKRHKNLAAHVSPAFRVEEG 124
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
D V +GQCRPLSKTVRFNVL+V+P +G A KAF+
Sbjct: 125 DWVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKAFS 158
>gi|308162673|gb|EFO65054.1| Ribosomal protein S11 [Giardia lamblia P15]
Length = 199
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/134 (67%), Positives = 108/134 (80%), Gaps = 2/134 (1%)
Query: 9 FLKQPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNR 68
FL++ RF+KSIG+G+ TP AI GTYIDKKCPFTG VSIRGRIL G HSAKM R
Sbjct: 66 FLRKDNARCLRFYKSIGMGYHTPITAINGTYIDKKCPFTGNVSIRGRILRGVVHSAKMQR 125
Query: 69 TIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
+IIVRR+YLHFV+KY+RYE+RH ++ AH+SPCFRVKEGD V IG+CRPLSKT+RFNV+KV
Sbjct: 126 SIIVRRDYLHFVQKYKRYERRHKHVAAHLSPCFRVKEGDIVTIGECRPLSKTIRFNVIKV 185
Query: 129 IPAGSSGGAKKAFT 142
P S AKK F+
Sbjct: 186 EPV--SEAAKKRFS 197
>gi|320583333|gb|EFW97548.1| Protein component of the small (40S) ribosomal subunit [Ogataea
parapolymorpha DL-1]
Length = 195
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/124 (71%), Positives = 104/124 (83%), Gaps = 3/124 (2%)
Query: 19 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
R++K +GLGFKTP+ AIEGTYIDKKCPFTGTVSIRGRIL GT S KM+RTII+RR+YLH
Sbjct: 73 RWYKDVGLGFKTPKSAIEGTYIDKKCPFTGTVSIRGRILTGTVVSTKMHRTIIIRRDYLH 132
Query: 79 FVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAK 138
++ KY RYEKRH N+ AH+SP FRV+EGD V +GQCRPLSKTVRFNV+KV S+ G
Sbjct: 133 YIPKYNRYEKRHKNLAAHVSPAFRVQEGDIVTVGQCRPLSKTVRFNVVKV---ASAKGKA 189
Query: 139 KAFT 142
KAFT
Sbjct: 190 KAFT 193
>gi|255712561|ref|XP_002552563.1| 40S ribosomal protein S11 [Lachancea thermotolerans]
gi|238933942|emb|CAR22125.1| KLTH0C07810p [Lachancea thermotolerans CBS 6340]
Length = 156
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/152 (59%), Positives = 115/152 (75%), Gaps = 12/152 (7%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q E+AF KQP + R++K++GLGFKTP+ AIEG+YIDKKCPFTG V
Sbjct: 5 LTVQAERAFQKQPHIFTNPKTKANRRTKRWYKNVGLGFKTPKTAIEGSYIDKKCPFTGNV 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRG+IL+G SAKM+RTI++RR+YLH+V KY RYEKRH N+PAH+SP FRV+ GD V
Sbjct: 65 SIRGKILSGVVVSAKMHRTIVIRRDYLHYVPKYNRYEKRHKNVPAHVSPAFRVEVGDVVT 124
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
+GQCRP+SKTVRFNVLKV ++G A K F+
Sbjct: 125 VGQCRPISKTVRFNVLKV--TSTAGQANKQFS 154
>gi|258577261|ref|XP_002542812.1| 40S ribosomal protein S11 [Uncinocarpus reesii 1704]
gi|237903078|gb|EEP77479.1| 40S ribosomal protein S11 [Uncinocarpus reesii 1704]
Length = 161
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/157 (59%), Positives = 114/157 (72%), Gaps = 17/157 (10%)
Query: 1 MAEQTEKAFLKQPGKGGN---------------RFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP N R++K +GLGFKTP+ AIEG+YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLNSKVKSKSKKVGKGGRRWYKDVGLGFKTPKTAIEGSYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RT+I+RR YLH++ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FTGLVSIRGRILTGTVVSTKMHRTLIIRREYLHYIPKYNRYEKRHKNLAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V +GQCRPLSKTVRFNVL+V+P +G A K FT
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKGFT 159
>gi|240849484|ref|NP_001155823.1| 40S ribosomal protein S11 [Acyrthosiphon pisum]
gi|239787971|dbj|BAH70684.1| ACYPI009948 [Acyrthosiphon pisum]
Length = 152
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/152 (63%), Positives = 112/152 (73%), Gaps = 14/152 (9%)
Query: 1 MAEQTEKAFLKQPGKGGNR----------FWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
MA+QTEKAF KQP NR ++S+GLGFKTPREAI+GTYIDKKCPFTG V
Sbjct: 1 MADQTEKAFQKQPTVFLNRKESKKKKPLRHYRSVGLGFKTPREAIDGTYIDKKCPFTGNV 60
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
SIRGRIL GT KM RTI++RR+YLH++ KY R+EKRH N+ H+SPCFR V+ GD V
Sbjct: 61 SIRGRILTGTVRKMKMQRTIVIRRDYLHYISKYNRFEKRHKNMSVHLSPCFRDVEIGDIV 120
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IG+CRPLSKTVRFNVLKV GAKK F
Sbjct: 121 TIGECRPLSKTVRFNVLKVTKG---TGAKKGF 149
>gi|343427201|emb|CBQ70729.1| probable RPS11B-ribosomal protein S11B [Sporisorium reilianum SRZ2]
Length = 159
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/151 (63%), Positives = 107/151 (70%), Gaps = 10/151 (6%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ QTEKAF KQP R++K +GLGFKTPR AI+GTYIDKKCP+TG V
Sbjct: 6 LGVQTEKAFQKQPIFQNSKALRKTTRDRRWYKDVGLGFKTPRAAIDGTYIDKKCPWTGLV 65
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRGRIL G S KM RTII+RR YLHFV KY RYEKRH N+ AH+SP FRV+ GD V
Sbjct: 66 SIRGRILTGKVVSTKMTRTIIIRREYLHFVPKYSRYEKRHKNVAAHVSPAFRVQVGDTVT 125
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IGQCRPLSKTVRFNVLKV S+ A K F
Sbjct: 126 IGQCRPLSKTVRFNVLKVAKNKSAEKAAKQF 156
>gi|261187911|ref|XP_002620373.1| 40S ribosomal protein S11 [Ajellomyces dermatitidis SLH14081]
gi|239593490|gb|EEQ76071.1| 40S ribosomal protein S11 [Ajellomyces dermatitidis SLH14081]
gi|239608469|gb|EEQ85456.1| 40S ribosomal protein S11 [Ajellomyces dermatitidis ER-3]
gi|327356081|gb|EGE84938.1| 40S ribosomal protein S11 [Ajellomyces dermatitidis ATCC 18188]
Length = 161
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 113/156 (72%), Gaps = 17/156 (10%)
Query: 1 MAEQTEKAFLKQPGKGGN---------------RFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP N R++K +GLGF+TP+ AIEG+YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLNSKQKSKSKKVGKGGRRWYKDVGLGFRTPKTAIEGSYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RTIIVRR YLH++ KY RYEKRH NI AH+SP FRV+E
Sbjct: 65 FTGQVSIRGRILTGTAVSTKMHRTIIVRREYLHYIPKYSRYEKRHKNIAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V +GQCRPLSKTVRFNVL+V+P +G A K F
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKQF 158
>gi|50292587|ref|XP_448726.1| 40S ribosomal protein S11 [Candida glabrata CBS 138]
gi|49528038|emb|CAG61689.1| unnamed protein product [Candida glabrata]
Length = 156
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/151 (61%), Positives = 114/151 (75%), Gaps = 12/151 (7%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q+E+AF KQP K R++K+ GLGFKTP+ AIEG+YIDKKCPFTG V
Sbjct: 5 LTVQSERAFQKQPHIFSNPKFKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLV 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRG+IL+GT S KM+RTII+RR+YLH+V KY RYEKRH N+P H+SP FRV+ GD V
Sbjct: 65 SIRGKILSGTVVSTKMHRTIIIRRDYLHYVPKYNRYEKRHKNVPVHVSPAFRVQVGDIVT 124
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+GQCRP+SKTVRFNVLKV A ++G A K F
Sbjct: 125 VGQCRPISKTVRFNVLKV--AAATGKANKQF 153
>gi|189210407|ref|XP_001941535.1| 40S ribosomal protein S11 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977628|gb|EDU44254.1| 40S ribosomal protein S11 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 159
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/154 (59%), Positives = 111/154 (72%), Gaps = 15/154 (9%)
Query: 1 MAEQTEKAFLKQP-------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
+ Q+E+AF KQP R++K +GLGF+TP+ AIEGTYIDKKCPFT
Sbjct: 5 LTVQSERAFQKQPHIFLNHKVGGPRKNTRNRRWYKDVGLGFRTPKTAIEGTYIDKKCPFT 64
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
G VSIRGRIL GT S KM+RT+I+RR YLHF+ KY RYEKRH N+ AH+SP FRV+ GD
Sbjct: 65 GMVSIRGRILTGTVMSTKMHRTLIIRREYLHFIPKYSRYEKRHKNLAAHVSPAFRVEPGD 124
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V++GQCRPLSKTVRFNVL+V+P G A K F
Sbjct: 125 QVVVGQCRPLSKTVRFNVLRVLP--RKGKAAKQF 156
>gi|326482845|gb|EGE06855.1| 40S ribosomal protein S11 [Trichophyton equinum CBS 127.97]
Length = 161
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/156 (58%), Positives = 114/156 (73%), Gaps = 17/156 (10%)
Query: 1 MAEQTEKAFLKQPGKGGN---------------RFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF+KQP N R++K +GLGF+TP+ AIEG YIDKKCP
Sbjct: 5 LTVQSERAFMKQPHIFTNSKVKSKSKSVGKGGRRWYKDVGLGFRTPKTAIEGNYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RT+++RR Y+H++ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FTGQVSIRGRILTGTVVSTKMHRTLVIRREYVHYIPKYSRYEKRHKNLAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V +GQCRPLSKTVRFNVL+V+P +G A KAF
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKAF 158
>gi|451995655|gb|EMD88123.1| hypothetical protein COCHEDRAFT_1227348 [Cochliobolus
heterostrophus C5]
Length = 159
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/154 (59%), Positives = 111/154 (72%), Gaps = 15/154 (9%)
Query: 1 MAEQTEKAFLKQP-------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
+ Q+E+AF KQP R++K +GLGF+TP+ AIEGTYIDKKCPFT
Sbjct: 5 LTVQSERAFQKQPHIFLNHKVGGPRKNTRSRRWYKDVGLGFRTPKTAIEGTYIDKKCPFT 64
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
G VSIRGRIL GT S KM+RT+I+RR YLHF+ KY RYEKRH N+ AH+SP FRV+ GD
Sbjct: 65 GMVSIRGRILTGTVMSTKMHRTLIIRREYLHFIPKYSRYEKRHKNLAAHVSPAFRVEPGD 124
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V++GQCRPLSKTVRFNVL+V+P G A K F
Sbjct: 125 QVVVGQCRPLSKTVRFNVLRVLP--RKGKAAKQF 156
>gi|56757715|gb|AAW26998.1| SJCHGC00575 protein [Schistosoma japonicum]
gi|226472390|emb|CAX77231.1| Ribosomal protein S11 [Schistosoma japonicum]
gi|226472392|emb|CAX77232.1| Ribosomal protein S11 [Schistosoma japonicum]
gi|226472394|emb|CAX77233.1| Ribosomal protein S11 [Schistosoma japonicum]
gi|226472396|emb|CAX77234.1| Ribosomal protein S11 [Schistosoma japonicum]
gi|226472400|emb|CAX77236.1| Ribosomal protein S11 [Schistosoma japonicum]
gi|226472402|emb|CAX77237.1| Ribosomal protein S11 [Schistosoma japonicum]
gi|226472404|emb|CAX77238.1| Ribosomal protein S11 [Schistosoma japonicum]
gi|226472406|emb|CAX77239.1| Ribosomal protein S11 [Schistosoma japonicum]
gi|226472408|emb|CAX77240.1| Ribosomal protein S11 [Schistosoma japonicum]
gi|226472410|emb|CAX77241.1| Ribosomal protein S11 [Schistosoma japonicum]
gi|226472412|emb|CAX77242.1| Ribosomal protein S11 [Schistosoma japonicum]
gi|226472414|emb|CAX77243.1| Ribosomal protein S11 [Schistosoma japonicum]
gi|226473494|emb|CAX71432.1| Ribosomal protein S11 [Schistosoma japonicum]
gi|226473496|emb|CAX71433.1| Ribosomal protein S11 [Schistosoma japonicum]
gi|226473498|emb|CAX71434.1| Ribosomal protein S11 [Schistosoma japonicum]
Length = 146
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/144 (66%), Positives = 110/144 (76%), Gaps = 4/144 (2%)
Query: 1 MAEQTEKAFLKQP--GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILA 58
MAEQ E AF KQ GK G R++KSIGLG+KTP+EAI GTY+DKKCPFTG V IRGRIL
Sbjct: 1 MAEQRENAFQKQEVKGKKGGRYYKSIGLGYKTPKEAIFGTYVDKKCPFTGNVRIRGRILT 60
Query: 59 GTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPL 117
G AKMNRTI++RR+YL +VKKY RYEKRH N+ H+SPCFR V GD V +G+CRPL
Sbjct: 61 GVVRKAKMNRTIVIRRDYLKYVKKYNRYEKRHKNMSVHLSPCFRDVTIGDVVTVGECRPL 120
Query: 118 SKTVRFNVLKVIPAGSSGGAKKAF 141
SKTV FNV+KV A S KKAF
Sbjct: 121 SKTVSFNVIKVSKAAGS-KYKKAF 143
>gi|330928987|ref|XP_003302475.1| 40S ribosomal protein S11 [Pyrenophora teres f. teres 0-1]
gi|311322150|gb|EFQ89428.1| hypothetical protein PTT_14301 [Pyrenophora teres f. teres 0-1]
Length = 159
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/154 (59%), Positives = 111/154 (72%), Gaps = 15/154 (9%)
Query: 1 MAEQTEKAFLKQP-------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
+ Q+E+AF KQP R++K +GLGF+TP+ AIEGTYIDKKCPFT
Sbjct: 5 LTVQSERAFQKQPHIFLNHKVGGPRKNTRNRRWYKEVGLGFRTPKTAIEGTYIDKKCPFT 64
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
G VSIRGRIL GT S KM+RT+I+RR YLHF+ KY RYEKRH N+ AH+SP FRV+ GD
Sbjct: 65 GMVSIRGRILTGTVMSTKMHRTLIIRREYLHFIPKYSRYEKRHKNLAAHVSPAFRVEPGD 124
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V++GQCRPLSKTVRFNVL+V+P G A K F
Sbjct: 125 QVVVGQCRPLSKTVRFNVLRVLP--RKGKAAKQF 156
>gi|396459223|ref|XP_003834224.1| similar to 40S ribosomal protein S11 [Leptosphaeria maculans JN3]
gi|312210773|emb|CBX90859.1| similar to 40S ribosomal protein S11 [Leptosphaeria maculans JN3]
Length = 159
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/155 (58%), Positives = 112/155 (72%), Gaps = 15/155 (9%)
Query: 1 MAEQTEKAFLKQP-------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
+ Q+E+A+ KQP R++K +GLGF+TP+ AIEGTYIDKKCPFT
Sbjct: 5 LTVQSERAYQKQPHIFLNHKVGGPRKNTRSRRWYKDVGLGFRTPKTAIEGTYIDKKCPFT 64
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
G VSIRGRIL GT S KM+RT+I+RR YLHF+ KY RYEKRH N+ AH+SP FR + GD
Sbjct: 65 GMVSIRGRILTGTVMSTKMHRTLIIRREYLHFIPKYSRYEKRHKNLAAHVSPAFRAEPGD 124
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
V++GQCRPLSKTVRFNVL+V+P SG A K F+
Sbjct: 125 QVVVGQCRPLSKTVRFNVLRVLP--RSGKAAKQFS 157
>gi|145238624|ref|XP_001391959.1| 40S ribosomal protein S11 [Aspergillus niger CBS 513.88]
gi|134076452|emb|CAK39678.1| unnamed protein product [Aspergillus niger]
gi|350635906|gb|EHA24267.1| hypothetical protein ASPNIDRAFT_209386 [Aspergillus niger ATCC
1015]
gi|358368877|dbj|GAA85493.1| 40S ribosomal protein S11 [Aspergillus kawachii IFO 4308]
Length = 160
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/156 (59%), Positives = 114/156 (73%), Gaps = 16/156 (10%)
Query: 1 MAEQTEKAFLKQPG--------------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
+ Q+E+AF KQP G R++K +GLGF+TP+ AIEG+YIDKKCPF
Sbjct: 5 LTVQSERAFQKQPHIFVNPKAQAKSKKVGTGRRWYKDVGLGFRTPKTAIEGSYIDKKCPF 64
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
TG VSIRGRIL G S KM+RTI++RR YLH+V KY RYEKRH N+ AH+SP FRV+EG
Sbjct: 65 TGLVSIRGRILTGRVVSTKMHRTIVIRREYLHYVPKYNRYEKRHKNLAAHVSPAFRVEEG 124
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
D V +GQCRPLSKTVRFNVL+V+P +G A KAF+
Sbjct: 125 DWVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKAFS 158
>gi|159108538|ref|XP_001704539.1| Ribosomal protein S11 [Giardia lamblia ATCC 50803]
gi|157432605|gb|EDO76865.1| Ribosomal protein S11 [Giardia lamblia ATCC 50803]
Length = 154
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/134 (67%), Positives = 108/134 (80%), Gaps = 2/134 (1%)
Query: 9 FLKQPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNR 68
FL++ RF+KSIG+G+ TP AI GTYIDKKCPFTG VSIRGRIL G HSAKM R
Sbjct: 21 FLRKDNARCLRFYKSIGMGYHTPITAINGTYIDKKCPFTGNVSIRGRILRGVVHSAKMQR 80
Query: 69 TIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
+IIVRR+YLHFV+KY+RYE+RH ++ AH+SPCFRVKEGD V IG+CRPLSKT+RFNV+KV
Sbjct: 81 SIIVRRDYLHFVQKYKRYERRHKHVAAHLSPCFRVKEGDIVTIGECRPLSKTIRFNVIKV 140
Query: 129 IPAGSSGGAKKAFT 142
P S AKK F+
Sbjct: 141 EPV--SEAAKKRFS 152
>gi|392874194|gb|AFM85929.1| 40S ribosomal protein S11 [Callorhinchus milii]
gi|392874328|gb|AFM85996.1| 40S ribosomal protein S11 [Callorhinchus milii]
gi|392874550|gb|AFM86107.1| 40S ribosomal protein S11 [Callorhinchus milii]
gi|392875596|gb|AFM86630.1| 40S ribosomal protein S11 [Callorhinchus milii]
gi|392877184|gb|AFM87424.1| 40S ribosomal protein S11 [Callorhinchus milii]
gi|392877688|gb|AFM87676.1| 40S ribosomal protein S11 [Callorhinchus milii]
gi|392882196|gb|AFM89930.1| 40S ribosomal protein S11 [Callorhinchus milii]
gi|392883060|gb|AFM90362.1| 40S ribosomal protein S11 [Callorhinchus milii]
gi|392883662|gb|AFM90663.1| 40S ribosomal protein S11 [Callorhinchus milii]
gi|392883668|gb|AFM90666.1| 40S ribosomal protein S11 [Callorhinchus milii]
gi|392883728|gb|AFM90696.1| 40S ribosomal protein S11 [Callorhinchus milii]
gi|392883824|gb|AFM90744.1| 40S ribosomal protein S11 [Callorhinchus milii]
Length = 158
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 117/158 (74%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+GG R+++++GLGFKTPREAI+GTYIDKKC
Sbjct: 1 MADNQTERAYQKQPTIFQNKKRALLGEGGKEKLPRYYRNVGLGFKTPREAIDGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILTGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 121 QSGDSVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 155
>gi|119178420|ref|XP_001240883.1| 40S ribosomal protein S11 [Coccidioides immitis RS]
gi|303310369|ref|XP_003065197.1| 40S ribosomal protein S11 [Coccidioides posadasii C735 delta SOWgp]
gi|240104857|gb|EER23052.1| 40S ribosomal protein S11, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320033895|gb|EFW15841.1| 40S ribosomal protein S11 [Coccidioides posadasii str. Silveira]
gi|392867158|gb|EAS29640.2| 40S ribosomal protein S11 [Coccidioides immitis RS]
Length = 161
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/157 (59%), Positives = 114/157 (72%), Gaps = 17/157 (10%)
Query: 1 MAEQTEKAFLKQPGKGGN---------------RFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP N R++K +GLGFKTP+ AIEG+YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLNSKVKSKSKKVGKGGRRWYKDVGLGFKTPKTAIEGSYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RT+I+RR YLH++ KY RYEKRH N+ AH+SP FRV+E
Sbjct: 65 FTGLVSIRGRILTGTVVSTKMHRTVIIRREYLHYIPKYNRYEKRHKNLAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V +GQCRPLSKTVRFNVL+V+P +G A K F+
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKGFS 159
>gi|451851545|gb|EMD64843.1| hypothetical protein COCSADRAFT_170685 [Cochliobolus sativus
ND90Pr]
Length = 159
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 91/154 (59%), Positives = 111/154 (72%), Gaps = 15/154 (9%)
Query: 1 MAEQTEKAFLKQP-------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
+ Q+E+AF KQP R++K +GLGF+TP+ AIEGTYIDKKCPFT
Sbjct: 5 LTVQSERAFQKQPHIFLNHKVGGPRKNTRSRRWYKDVGLGFRTPKTAIEGTYIDKKCPFT 64
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
G VSIRGRIL GT S KM+RT+I+RR YLHF+ KY RYEKRH N+ AH+SP FRV+ GD
Sbjct: 65 GMVSIRGRILTGTVMSTKMHRTLIIRREYLHFIPKYSRYEKRHKNLAAHVSPAFRVEPGD 124
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V++GQCRPLSKTVRFNVL+++P G A K F
Sbjct: 125 QVVVGQCRPLSKTVRFNVLRILP--RKGKAAKQF 156
>gi|154273224|ref|XP_001537464.1| 40S ribosomal protein S11 [Ajellomyces capsulatus NAm1]
gi|150415976|gb|EDN11320.1| 40S ribosomal protein S11 [Ajellomyces capsulatus NAm1]
gi|225555021|gb|EEH03314.1| 40S ribosomal protein S11 [Ajellomyces capsulatus G186AR]
gi|325089447|gb|EGC42757.1| 40S ribosomal protein S11 [Ajellomyces capsulatus H88]
Length = 161
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/156 (60%), Positives = 113/156 (72%), Gaps = 17/156 (10%)
Query: 1 MAEQTEKAFLKQPGKGGN---------------RFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP N R++K +GLGF+TP+ AIEG+YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLNSKQKSKSKKVGKGGRRWYKDVGLGFRTPKTAIEGSYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RTII+RR YLH++ KY RYEKRH NI AH+SP FRV+E
Sbjct: 65 FTGQVSIRGRILTGTVVSTKMHRTIIIRREYLHYIPKYSRYEKRHKNIAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V +GQCRPLSKTVRFNVL+V+P +G A K F
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKQF 158
>gi|392877678|gb|AFM87671.1| 40S ribosomal protein S11 [Callorhinchus milii]
Length = 158
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 117/158 (74%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+GG R+++++GLGFKTPREAI+GTYIDKKC
Sbjct: 1 MADNQTERAYQKQPTIFQNKKRALLGEGGKEKLPRYYRNVGLGFKTPREAIDGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILTGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 121 QSGDSVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 155
>gi|448086627|ref|XP_004196145.1| Piso0_005592 [Millerozyma farinosa CBS 7064]
gi|359377567|emb|CCE85950.1| Piso0_005592 [Millerozyma farinosa CBS 7064]
Length = 155
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 91/145 (62%), Positives = 110/145 (75%), Gaps = 11/145 (7%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q+ KAF KQP K R++K++GLGFKTP+ AIEG YIDKKCPFTG V
Sbjct: 5 LTVQSGKAFQKQPHIFTNPKAKANKKTQRWYKNVGLGFKTPKAAIEGNYIDKKCPFTGLV 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRGRIL GT S KM+RTII+RR+YLH+V KY RYEKRH N+ AH+SP FRV+EGD V+
Sbjct: 65 SIRGRILTGTVVSTKMHRTIIIRRDYLHYVPKYNRYEKRHKNVAAHVSPAFRVQEGDVVV 124
Query: 111 IGQCRPLSKTVRFNVLKV-IPAGSS 134
+GQCRP+SKT+RFNVLKV +P S
Sbjct: 125 VGQCRPISKTIRFNVLKVAVPVSKS 149
>gi|388851928|emb|CCF54522.1| probable RPS11B-ribosomal protein S11B [Ustilago hordei]
Length = 159
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/151 (62%), Positives = 107/151 (70%), Gaps = 10/151 (6%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ QTEKAF KQP R++K +GLGFKTPR AI+GTYIDKKCP+TG V
Sbjct: 6 LGVQTEKAFQKQPIFQNSKAARKTTRDRRWYKDVGLGFKTPRAAIDGTYIDKKCPWTGLV 65
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRGRIL G S KM RTII+RR YLH+V KY RYEKRH N+ AH+SP FRV+ GD V
Sbjct: 66 SIRGRILTGKVISTKMTRTIIIRREYLHYVPKYSRYEKRHKNVAAHVSPAFRVQVGDTVT 125
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IGQCRPLSKTVRFNVLKV S+ A K F
Sbjct: 126 IGQCRPLSKTVRFNVLKVAKNKSAEKAAKQF 156
>gi|403162911|ref|XP_003323062.2| 40S ribosomal protein S11 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375173134|gb|EFP78643.2| 40S ribosomal protein S11 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 162
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 94/152 (61%), Positives = 106/152 (69%), Gaps = 14/152 (9%)
Query: 2 AEQTEKAFLKQP--------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
AEQTEKAF KQP R++K +GLGFKTP EAI GTYIDKKCPFT
Sbjct: 7 AEQTEKAFQKQPIFQNSKIKSAGKKVASKDRRWYKDVGLGFKTPAEAINGTYIDKKCPFT 66
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
G VSIRGRIL G S KM RTII+RR YLH++ KY RYEKRH N+ H SP FRV+ GD
Sbjct: 67 GEVSIRGRILTGVVVSTKMTRTIIIRREYLHYIPKYSRYEKRHQNMAVHCSPAFRVEIGD 126
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKK 139
V +GQCRPLSKTVRFNVL+V + SS AK+
Sbjct: 127 QVTVGQCRPLSKTVRFNVLRVQKSKSSALAKQ 158
>gi|340509292|gb|EGR34842.1| hypothetical protein IMG5_000700 [Ichthyophthirius multifiliis]
Length = 157
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 88/154 (57%), Positives = 110/154 (71%), Gaps = 13/154 (8%)
Query: 1 MAEQTEKAFLKQPG-------------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
M Q E+AF KQ G G R++K+IGLGFKTP+EAI+G YIDKKCPFT
Sbjct: 1 MENQHERAFQKQDGIFLNSKKVLQKKTSAGVRYYKNIGLGFKTPKEAIDGHYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
+SIRG+++ G S KMNRT+I+RR+YLH+V+KY RYEKRH NI H+SPCF+VKEGD
Sbjct: 61 SNLSIRGKLIKGLVISTKMNRTVIIRRDYLHYVRKYNRYEKRHRNIAVHVSPCFQVKEGD 120
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
++ GQCRP+SKTVRFN L+V P G +K F
Sbjct: 121 ILVAGQCRPISKTVRFNTLQVYPNEIVGSVRKQF 154
>gi|67538104|ref|XP_662826.1| hypothetical protein AN5222.2 [Aspergillus nidulans FGSC A4]
gi|40743213|gb|EAA62403.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259484682|tpe|CBF81112.1| TPA: 40S ribosomal protein S11 (Broad) [Aspergillus nidulans FGSC
A4]
Length = 160
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 94/156 (60%), Positives = 114/156 (73%), Gaps = 16/156 (10%)
Query: 1 MAEQTEKAFLKQPGKGGN--------------RFWKSIGLGFKTPREAIEGTYIDKKCPF 46
+ Q+E+AF KQP N R++K +GLGF+TP+ AIEG+YIDKKCPF
Sbjct: 5 LTVQSERAFQKQPHIFLNPKTKAKSKKVGQTRRWYKDVGLGFRTPKTAIEGSYIDKKCPF 64
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
TG VSIRGRIL G S KM+RTII+RR YLH+V KY RYEKRH N+ AH+SP FRV+EG
Sbjct: 65 TGMVSIRGRILTGRVVSTKMHRTIIIRREYLHYVPKYNRYEKRHKNLAAHVSPAFRVEEG 124
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
D V +GQCRPLSKTVRFNVL+V+P +G A KAF+
Sbjct: 125 DWVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKAFS 158
>gi|121710310|ref|XP_001272771.1| 40S ribosomal protein S11 [Aspergillus clavatus NRRL 1]
gi|119400921|gb|EAW11345.1| 40S ribosomal protein S11 [Aspergillus clavatus NRRL 1]
Length = 160
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/156 (59%), Positives = 114/156 (73%), Gaps = 16/156 (10%)
Query: 1 MAEQTEKAFLKQPGKGGN--------------RFWKSIGLGFKTPREAIEGTYIDKKCPF 46
+ Q+E+AF KQP N R++K +GLGF+TP+ AIEG+YIDKKCPF
Sbjct: 5 LTVQSERAFQKQPHIFLNSKTKAKSKKVGQARRWYKDVGLGFRTPKTAIEGSYIDKKCPF 64
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
TG VSIRGRIL G S KM+RTI++RR YLH+V KY RYEKRH N+ AH+SP FRV+EG
Sbjct: 65 TGMVSIRGRILTGRVVSTKMHRTIVIRREYLHYVPKYNRYEKRHKNLAAHVSPAFRVEEG 124
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
D V +GQCRPLSKTVRFNVL+V+P +G A KAF+
Sbjct: 125 DWVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKAFS 158
>gi|448082098|ref|XP_004195051.1| Piso0_005592 [Millerozyma farinosa CBS 7064]
gi|359376473|emb|CCE87055.1| Piso0_005592 [Millerozyma farinosa CBS 7064]
Length = 155
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 91/145 (62%), Positives = 109/145 (75%), Gaps = 11/145 (7%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q+ KAF KQP K R++K +GLGFKTP+ AIEG YIDKKCPFTG V
Sbjct: 5 LTVQSGKAFQKQPHIFTNPKAKANKKTQRWYKDVGLGFKTPKAAIEGNYIDKKCPFTGLV 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRGRIL GT S KM+RTII+RR+YLH+V KY RYEKRH N+ AH+SP FRV+EGD V+
Sbjct: 65 SIRGRILTGTVVSTKMHRTIIIRRDYLHYVPKYNRYEKRHRNVAAHVSPAFRVQEGDVVV 124
Query: 111 IGQCRPLSKTVRFNVLKV-IPAGSS 134
+GQCRP+SKT+RFNVLKV +P S
Sbjct: 125 VGQCRPISKTIRFNVLKVAVPVSKS 149
>gi|61654722|gb|AAX48887.1| S11 [Suberites domuncula]
Length = 157
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/157 (60%), Positives = 112/157 (71%), Gaps = 19/157 (12%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTE+A+ KQ K RF +++GLGFKTPREA+EGTYIDKKCP
Sbjct: 1 MAEQTERAYQKQKPIFQNSKTVILGGSKKKKDQRFVRNVGLGFKTPREAVEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VK 104
FTG VSIRGRIL G S KM RTI++RR+YLH++KKY R+EKRH N+ AH+SPCFR V
Sbjct: 61 FTGNVSIRGRILTGIVKSLKMKRTIVIRRDYLHYIKKYHRFEKRHKNLSAHLSPCFRDVA 120
Query: 105 EGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD ++GQCRPLSKTVRFNVLKV + G KK F
Sbjct: 121 LGDLAVVGQCRPLSKTVRFNVLKV---QKTKGGKKQF 154
>gi|449298708|gb|EMC94723.1| hypothetical protein BAUCODRAFT_74231 [Baudoinia compniacensis UAMH
10762]
Length = 162
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/157 (59%), Positives = 115/157 (73%), Gaps = 18/157 (11%)
Query: 1 MAEQTEKAFLKQPGKGGN----------------RFWKSIGLGFKTPREAIEGTYIDKKC 44
+A Q+E+A+ KQP N R++K +GLGF+TP+ AI+G+YIDKKC
Sbjct: 5 LAVQSERAYQKQPHIFTNAKATTKKSTKKGKGGRRWFKDVGLGFRTPKTAIDGSYIDKKC 64
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVK 104
PFTG VSIRGRIL GT S KM+RT+++RR YLHFV KY RYEKRH N+ AH+SP FRV+
Sbjct: 65 PFTGLVSIRGRILTGTVVSTKMHRTLVIRREYLHFVPKYSRYEKRHKNLAAHVSPAFRVE 124
Query: 105 EGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
EGD V +GQCRPLSKTVRFNVL+V+P +G A KAF
Sbjct: 125 EGDIVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKAF 159
>gi|145488023|ref|XP_001430016.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397111|emb|CAK62618.1| unnamed protein product [Paramecium tetraurelia]
Length = 188
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/140 (64%), Positives = 102/140 (72%), Gaps = 1/140 (0%)
Query: 4 QTEKAFLKQPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHS 63
Q K L + G R+WK +GLGFK P++AIEG YIDKKCPFTG VS+RG IL G S
Sbjct: 47 QNSKKLLAKKTSKGVRYWKEVGLGFKVPKDAIEGNYIDKKCPFTGNVSVRGAILKGIVIS 106
Query: 64 AKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF-RVKEGDHVIIGQCRPLSKTVR 122
KM RTII+RR+YLH+V KY RYEKRH N+P HISP F VKEGD V+ GQCRPLSKTVR
Sbjct: 107 TKMTRTIIIRRDYLHYVAKYNRYEKRHRNVPVHISPAFGPVKEGDIVVCGQCRPLSKTVR 166
Query: 123 FNVLKVIPAGSSGGAKKAFT 142
FNVLKVIP G +K F
Sbjct: 167 FNVLKVIPNEIIGNVRKQFV 186
>gi|345571385|gb|EGX54199.1| hypothetical protein AOL_s00004g232 [Arthrobotrys oligospora ATCC
24927]
Length = 160
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/143 (62%), Positives = 111/143 (77%), Gaps = 16/143 (11%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKG R++KS+GLGFKTP+ AIEG YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLAHKASSQKKKAGKG-RRWYKSVGLGFKTPKAAIEGGYIDKKCP 63
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG +SIRGRIL+GT S KM+R++++RR YLHF+ KY RYEKRH N+PAH+SP FRV++
Sbjct: 64 FTGQISIRGRILSGTVISTKMHRSLVIRRPYLHFIPKYNRYEKRHHNVPAHVSPAFRVED 123
Query: 106 GDHVIIGQCRPLSKTVRFNVLKV 128
GD+V IGQCRPLSKTVRFNVL+V
Sbjct: 124 GDYVTIGQCRPLSKTVRFNVLRV 146
>gi|440804521|gb|ELR25398.1| ribosomal protein S17, putative [Acanthamoeba castellanii str.
Neff]
Length = 161
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 99/153 (64%), Positives = 109/153 (71%), Gaps = 15/153 (9%)
Query: 2 AEQTEKAFLKQP--------------GKG-GNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
A QTE+AF KQP GKG G RF K+IGLGFKTP+EAIEG YIDKKCPF
Sbjct: 3 AAQTERAFQKQPTVYVGKARVLGTKAGKGKGVRFTKNIGLGFKTPKEAIEGKYIDKKCPF 62
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
TG VSIRGRIL G S KM RTIIVRR+YLH+V KY R+EKRH NIPAH SP F +KEG
Sbjct: 63 TGNVSIRGRILRGVVVSTKMKRTIIVRRDYLHYVPKYNRFEKRHKNIPAHCSPAFTLKEG 122
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKK 139
D V +GQCRPLSKT+RFNV+ P G KK
Sbjct: 123 DVVTVGQCRPLSKTIRFNVIAHQPQNIQGLQKK 155
>gi|365982295|ref|XP_003667981.1| ribosomal protein S11 [Naumovozyma dairenensis CBS 421]
gi|343766747|emb|CCD22738.1| hypothetical protein NDAI_0A05830 [Naumovozyma dairenensis CBS 421]
Length = 156
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 92/152 (60%), Positives = 113/152 (74%), Gaps = 12/152 (7%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q+E+AF KQP K R++K+ GLGFKTP+ AIEG+Y+DKKCPFTG V
Sbjct: 5 LTVQSERAFQKQPHIFSNPKFKTSKRTKRWYKNAGLGFKTPKTAIEGSYVDKKCPFTGLV 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRG+IL GT S KM+RTI++RR+YLH+V KY RYEKRH N+P H+SP FRV+ GD V
Sbjct: 65 SIRGKILTGTVVSTKMHRTIVIRRDYLHYVPKYNRYEKRHKNVPVHVSPAFRVQVGDIVT 124
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GQCRP+SKTVRFNV+KV PA +G A K FT
Sbjct: 125 AGQCRPISKTVRFNVVKVSPA--AGKANKQFT 154
>gi|294873822|ref|XP_002766754.1| 40S ribosomal protein S11, putative [Perkinsus marinus ATCC 50983]
gi|294891206|ref|XP_002773473.1| 40S ribosomal protein S11, putative [Perkinsus marinus ATCC 50983]
gi|294925729|ref|XP_002778990.1| 40S ribosomal protein S11, putative [Perkinsus marinus ATCC 50983]
gi|239867917|gb|EEQ99471.1| 40S ribosomal protein S11, putative [Perkinsus marinus ATCC 50983]
gi|239878626|gb|EER05289.1| 40S ribosomal protein S11, putative [Perkinsus marinus ATCC 50983]
gi|239887836|gb|EER10785.1| 40S ribosomal protein S11, putative [Perkinsus marinus ATCC 50983]
Length = 155
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 96/152 (63%), Positives = 109/152 (71%), Gaps = 11/152 (7%)
Query: 1 MAEQTEKAFLKQPG-----------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGT 49
MA+Q EKAF KQ K G R++K++GLGF+TP+EAIEGTYIDKKCPFTG
Sbjct: 1 MADQHEKAFQKQDAVFLGNKRALKSKKGLRWFKNVGLGFQTPKEAIEGTYIDKKCPFTGN 60
Query: 50 VSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHV 109
VSIRGRI G S KM RTI+VRR+YLH++KKY R+EKRHSN H SPCF KEGD V
Sbjct: 61 VSIRGRIFRGMVISNKMERTIVVRRHYLHYIKKYNRFEKRHSNTAVHCSPCFEAKEGDIV 120
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GQCRPLSKTVRFNVLK+ G AKK F
Sbjct: 121 TCGQCRPLSKTVRFNVLKLEKNQIFGTAKKQF 152
>gi|410079655|ref|XP_003957408.1| hypothetical protein KAFR_0E01190 [Kazachstania africana CBS 2517]
gi|372463994|emb|CCF58273.1| hypothetical protein KAFR_0E01190 [Kazachstania africana CBS 2517]
Length = 156
Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 92/152 (60%), Positives = 114/152 (75%), Gaps = 12/152 (7%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q+E+AF KQP K R++K+IGLGFKTP+ AIEG+YIDKKCPF G+V
Sbjct: 5 LTVQSERAFQKQPHIFTNPKFKTTKRTKRWYKNIGLGFKTPKTAIEGSYIDKKCPFVGSV 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRG+IL GT S KM+RTI++RR+YLH+V KY RYEKRH N+P H+SP FRV+ GD V
Sbjct: 65 SIRGKILTGTVVSTKMHRTIVIRRDYLHYVPKYNRYEKRHKNVPVHVSPAFRVQVGDIVT 124
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GQCRP+SKTVRFNV+KV PA +G A K F+
Sbjct: 125 AGQCRPISKTVRFNVVKVSPA--AGKANKQFS 154
>gi|302695241|ref|XP_003037299.1| 40S ribosomal protein S11 [Schizophyllum commune H4-8]
gi|300110996|gb|EFJ02397.1| hypothetical protein SCHCODRAFT_64491 [Schizophyllum commune H4-8]
Length = 154
Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 94/154 (61%), Positives = 110/154 (71%), Gaps = 13/154 (8%)
Query: 1 MAEQTEKAFLKQP------GKGGN-------RFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MAEQ EKAF KQP KG R++K +GLGFKTP EAI G+YIDKKCPFT
Sbjct: 1 MAEQIEKAFQKQPLFQNAKAKGNKKVSGKNKRWYKDVGLGFKTPTEAINGSYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
G VSIRGRIL G S KM RTII+RR+YLH++ KY RYEKRH N+ AH+SP FRV+ GD
Sbjct: 61 GLVSIRGRILTGKVVSTKMTRTIIIRRDYLHYIPKYNRYEKRHKNLAAHLSPAFRVEVGD 120
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V +GQCRPLSKTVRFNVL+V ++ A + F
Sbjct: 121 VVTVGQCRPLSKTVRFNVLRVTKNKAAAKAFQKF 154
>gi|392875636|gb|AFM86650.1| putative ribosomal protein S11 [Callorhinchus milii]
Length = 158
Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 117/158 (74%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+GG R+++++GLGFKTPREAI+GTYIDKKC
Sbjct: 1 MADNQTERAYQKQPTIFQNKKRALLGEGGKEKLPRYYRNVGLGFKTPREAIDGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR +
Sbjct: 61 PFTGNVSIRGRILTGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDM 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 121 QSGDSVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 155
>gi|149898798|gb|ABR27861.1| 40S ribosomal protein S11 [Triatoma infestans]
Length = 194
Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 96/148 (64%), Positives = 110/148 (74%), Gaps = 13/148 (8%)
Query: 4 QTEKAFLKQP---------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRG 54
+TEKAF KQP K R +KS+GLGFKTPREAIEGTYIDKKCPFTG VSIRG
Sbjct: 47 ETEKAFQKQPHVFLASKVSSKKPLRRYKSVGLGFKTPREAIEGTYIDKKCPFTGNVSIRG 106
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQ 113
RIL G KM RTI++RR+YLH+V+KY R+EKRH N+ H+SPCFR V+ GD V +G+
Sbjct: 107 RILTGVVQKMKMQRTIVIRRDYLHYVRKYNRFEKRHKNMSVHLSPCFRDVEIGDVVTVGE 166
Query: 114 CRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
CRPLSKTVRFNVLKV GAKKAF
Sbjct: 167 CRPLSKTVRFNVLKVT---KGTGAKKAF 191
>gi|340504513|gb|EGR30949.1| hypothetical protein IMG5_120550 [Ichthyophthirius multifiliis]
Length = 157
Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 88/154 (57%), Positives = 110/154 (71%), Gaps = 13/154 (8%)
Query: 1 MAEQTEKAFLKQPG-------------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
M Q E+AF KQ G G R++K+IGLGFKTP+EAI+G YIDKKCPFT
Sbjct: 1 MENQHERAFQKQDGIFLNSKKVLQKKTSTGVRYYKNIGLGFKTPKEAIDGHYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
+SIRG+++ G S KMNRT+I+RR+YLH+V+KY RYEKRH NI H+SPCF+VKEGD
Sbjct: 61 SNLSIRGKLIKGLVISTKMNRTVIIRRDYLHYVRKYNRYEKRHRNIAVHVSPCFQVKEGD 120
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
++ GQCRP+SKTVRFN L+V P G +K F
Sbjct: 121 ILVAGQCRPISKTVRFNTLQVYPNEIVGSVRKQF 154
>gi|321249914|ref|XP_003191621.1| ribosomal protein S11 [Cryptococcus gattii WM276]
gi|317458088|gb|ADV19834.1| Ribosomal protein S11, putative [Cryptococcus gattii WM276]
Length = 153
Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 95/152 (62%), Positives = 109/152 (71%), Gaps = 13/152 (8%)
Query: 1 MAEQTEKAFLKQ------PGKGGN-------RFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MAEQTEKAF KQ KGG R++K +GLGFKTP EAI GTYIDKKCPFT
Sbjct: 1 MAEQTEKAFQKQHLFQNAKSKGGKKIATKTKRWYKDVGLGFKTPNEAINGTYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
G +SIRGRIL G HS KM TII+RR YLH++ KY+RYEKRH N+ AH SP FRV+ GD
Sbjct: 61 GDISIRGRILNGIVHSTKMTNTIIIRREYLHYIPKYRRYEKRHKNLAAHCSPAFRVEIGD 120
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKK 139
V +GQCRPLSKTVRFNVL+V ++ G K
Sbjct: 121 QVTVGQCRPLSKTVRFNVLRVSKNKAAKGFAK 152
>gi|256076834|ref|XP_002574714.1| ribosomal protein S11 [Schistosoma mansoni]
gi|353230548|emb|CCD76965.1| putative ribosomal protein S11 [Schistosoma mansoni]
Length = 146
Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 109/144 (75%), Gaps = 4/144 (2%)
Query: 1 MAEQTEKAFLKQP--GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILA 58
MAEQ E AF KQ GK G R++K+IGLG+KTP+EAI GTYIDKKCPFTG V IRGRIL
Sbjct: 1 MAEQRENAFQKQEVKGKNGGRYYKNIGLGYKTPKEAIFGTYIDKKCPFTGNVRIRGRILT 60
Query: 59 GTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPL 117
G KMNRTI++RR+YL +VKKY RYEKRH N+ H+SPCFR V GD V +G+CRPL
Sbjct: 61 GVVRKTKMNRTIVIRRDYLKYVKKYNRYEKRHKNMSVHLSPCFRDVAVGDVVTVGECRPL 120
Query: 118 SKTVRFNVLKVIPAGSSGGAKKAF 141
SKTV FNV+KV A S KKAF
Sbjct: 121 SKTVSFNVIKVSKAAGS-KYKKAF 143
>gi|145519199|ref|XP_001445466.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145548156|ref|XP_001459759.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412921|emb|CAK78069.1| unnamed protein product [Paramecium tetraurelia]
gi|124427585|emb|CAK92362.1| unnamed protein product [Paramecium tetraurelia]
Length = 159
Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 91/140 (65%), Positives = 102/140 (72%), Gaps = 1/140 (0%)
Query: 4 QTEKAFLKQPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHS 63
Q K L + G R+WK +GLGFK P+EAIEG YIDKKCPFTG VS+RG IL G S
Sbjct: 18 QNSKKLLAKKTSKGVRYWKEVGLGFKVPKEAIEGHYIDKKCPFTGNVSVRGAILKGIVIS 77
Query: 64 AKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF-RVKEGDHVIIGQCRPLSKTVR 122
KM RTII+RR+YLH+V KY RYEKRH N+P HISP F VKEGD V+ GQCRPLSKTVR
Sbjct: 78 TKMTRTIIIRRDYLHYVAKYNRYEKRHRNVPVHISPAFGPVKEGDIVVCGQCRPLSKTVR 137
Query: 123 FNVLKVIPAGSSGGAKKAFT 142
FNVLKVIP G +K F
Sbjct: 138 FNVLKVIPNEIIGNVRKQFV 157
>gi|145491782|ref|XP_001431890.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145496929|ref|XP_001434454.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398996|emb|CAK64492.1| unnamed protein product [Paramecium tetraurelia]
gi|124401580|emb|CAK67057.1| unnamed protein product [Paramecium tetraurelia]
Length = 159
Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 90/140 (64%), Positives = 102/140 (72%), Gaps = 1/140 (0%)
Query: 4 QTEKAFLKQPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHS 63
Q K L + G R+WK +GLGFK P++AIEG YIDKKCPFTG VS+RG IL G S
Sbjct: 18 QNSKKLLAKKTSKGVRYWKEVGLGFKVPKDAIEGNYIDKKCPFTGNVSVRGAILKGIVIS 77
Query: 64 AKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF-RVKEGDHVIIGQCRPLSKTVR 122
KM RTII+RR+YLH+V KY RYEKRH N+P HISP F VKEGD V+ GQCRPLSKTVR
Sbjct: 78 TKMTRTIIIRRDYLHYVAKYNRYEKRHRNVPVHISPAFGPVKEGDIVVCGQCRPLSKTVR 137
Query: 123 FNVLKVIPAGSSGGAKKAFT 142
FNVLKVIP G +K F
Sbjct: 138 FNVLKVIPNEIIGNVRKQFV 157
>gi|170040635|ref|XP_001848098.1| 40S ribosomal protein S11 [Culex quinquefasciatus]
gi|167864237|gb|EDS27620.1| 40S ribosomal protein S11 [Culex quinquefasciatus]
Length = 152
Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 96/153 (62%), Positives = 111/153 (72%), Gaps = 14/153 (9%)
Query: 1 MAEQTEKAFLKQPG----------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
MA+Q E+AF KQ G K G R +SIGLGFKTP+EAI GTYIDKKCPFTG +
Sbjct: 1 MADQNERAFQKQIGVNLNRKQVNKKKGFRLHRSIGLGFKTPKEAIAGTYIDKKCPFTGHI 60
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
SIRGRIL G KM RTI++RR+YLHF++KY R+EKRH NI H+SPCFR V+ GD V
Sbjct: 61 SIRGRILNGVVRKMKMQRTIVIRRDYLHFIRKYDRFEKRHRNISVHLSPCFRDVEVGDIV 120
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
+G+CRPLSKTVRFNVLKV GAKK FT
Sbjct: 121 TVGECRPLSKTVRFNVLKV---SKLAGAKKKFT 150
>gi|295662148|ref|XP_002791628.1| 40S ribosomal protein S11 [Paracoccidioides sp. 'lutzii' Pb01]
gi|225682259|gb|EEH20543.1| 40S ribosomal protein S11 [Paracoccidioides brasiliensis Pb03]
gi|226279754|gb|EEH35320.1| 30S ribosomal protein S17P [Paracoccidioides sp. 'lutzii' Pb01]
gi|226289633|gb|EEH45117.1| 30S ribosomal protein S17P [Paracoccidioides brasiliensis Pb18]
Length = 161
Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 91/150 (60%), Positives = 109/150 (72%), Gaps = 15/150 (10%)
Query: 1 MAEQTEKAFLKQPGKGGN---------------RFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP N R++K +GLGF+TP+ AIEG+YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLNSKQKSKSKKVGKGGRRWYKDVGLGFRTPKTAIEGSYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRIL GT S KM+RTII+RR YLH++ KY RYEKRH NI AH+SP FRV+E
Sbjct: 65 FTGQVSIRGRILTGTVVSTKMHRTIIIRREYLHYIPKYSRYEKRHKNIAAHVSPAFRVEE 124
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSG 135
GD V +GQCRPLSKTVRFNVL+V+P G
Sbjct: 125 GDQVTVGQCRPLSKTVRFNVLRVLPRTGKG 154
>gi|145516012|ref|XP_001443900.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411300|emb|CAK76503.1| unnamed protein product [Paramecium tetraurelia]
Length = 159
Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 96/157 (61%), Positives = 110/157 (70%), Gaps = 15/157 (9%)
Query: 1 MAE-QTEKAFLKQPG-------------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MA+ QT++AF KQ G G R+WK +GLGFK P++AIEG YIDKKCPF
Sbjct: 1 MADVQTQRAFQKQEGIFQNSKKLLAKKTSKGVRYWKEVGLGFKVPKDAIEGHYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF-RVKE 105
TG VS+RG IL G S KM RTII+RR+YLH+V KY RYEKRH N+P HISP F VKE
Sbjct: 61 TGNVSVRGAILKGIVISTKMTRTIIIRRDYLHYVAKYNRYEKRHRNVPVHISPAFGPVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V+ GQCRPLSKTVRFNVLKVIP G +K F
Sbjct: 121 GDIVVCGQCRPLSKTVRFNVLKVIPNEIIGNVRKQFV 157
>gi|264667385|gb|ACY71278.1| ribosomal protein S11 [Chrysomela tremula]
Length = 151
Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 91/138 (65%), Positives = 107/138 (77%), Gaps = 10/138 (7%)
Query: 1 MAEQTEKAFLKQP---------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVS 51
MA+QTEKAF KQP GK R +++GLGFKTPREAIEG+YIDKKCPFTG VS
Sbjct: 1 MADQTEKAFQKQPTVFLNRKNGGKKKLRLSRNVGLGFKTPREAIEGSYIDKKCPFTGNVS 60
Query: 52 IRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVI 110
IRGRIL G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD V
Sbjct: 61 IRGRILTGVVQKMKMQRTIVIRRDYLHYIRKYNRFEKRHRNMSVHLSPCFRDVEIGDVVT 120
Query: 111 IGQCRPLSKTVRFNVLKV 128
IG+CRPLSKTVRFNVLKV
Sbjct: 121 IGECRPLSKTVRFNVLKV 138
>gi|145528013|ref|XP_001449806.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417395|emb|CAK82409.1| unnamed protein product [Paramecium tetraurelia]
Length = 159
Score = 188 bits (477), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 96/157 (61%), Positives = 110/157 (70%), Gaps = 15/157 (9%)
Query: 1 MAE-QTEKAFLKQPG-------------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MA+ QT++AF KQ G G R+WK +GLGFK P+EAIEG Y+DKKCPF
Sbjct: 1 MADVQTQRAFQKQEGIFQNSKKLLAKKTTKGVRYWKEVGLGFKVPKEAIEGHYVDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF-RVKE 105
TG VS+RG IL G S KM RTII+RR+YLH+V KY RYEKRH N+P HISP F VKE
Sbjct: 61 TGNVSVRGAILKGIVISTKMTRTIIIRRDYLHYVAKYNRYEKRHRNVPVHISPAFGPVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V+ GQCRPLSKTVRFNVLKVIP G +K F
Sbjct: 121 GDIVVCGQCRPLSKTVRFNVLKVIPNEIIGNVRKQFV 157
>gi|226472398|emb|CAX77235.1| Ribosomal protein S11 [Schistosoma japonicum]
Length = 146
Score = 187 bits (476), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 109/144 (75%), Gaps = 4/144 (2%)
Query: 1 MAEQTEKAFLKQP--GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILA 58
MAEQ E AF KQ GK G R++KSIGLG+KTP+EAI GTY+DKKCPFTG V IRGRIL
Sbjct: 1 MAEQRENAFQKQEVKGKKGGRYYKSIGLGYKTPKEAIFGTYVDKKCPFTGNVRIRGRILT 60
Query: 59 GTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPL 117
G AKMNRTI++RR+YL +VKKY RYEKRH N+ H+SPCFR V GD V +G+CRPL
Sbjct: 61 GVVRKAKMNRTIVIRRDYLKYVKKYNRYEKRHKNMSVHLSPCFRDVTIGDVVTVGECRPL 120
Query: 118 SKTVRFNVLKVIPAGSSGGAKKAF 141
KTV FNV+KV A S KKAF
Sbjct: 121 GKTVSFNVIKVSKAAGS-KYKKAF 143
>gi|58259157|ref|XP_566991.1| ribosomal protein S11 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134107246|ref|XP_777753.1| 40S ribosomal protein S11 [Cryptococcus neoformans var. neoformans
B-3501A]
gi|50260449|gb|EAL23106.1| hypothetical protein CNBA6310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223128|gb|AAW41172.1| ribosomal protein S11, putative [Cryptococcus neoformans var.
neoformans JEC21]
gi|405118026|gb|AFR92801.1| ribosomal protein S11 [Cryptococcus neoformans var. grubii H99]
Length = 153
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/152 (62%), Positives = 109/152 (71%), Gaps = 13/152 (8%)
Query: 1 MAEQTEKAFLKQ------PGKGGN-------RFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MAEQTEKAF KQ KGG R++K +GLGFKTP EAI GTYIDKKCPFT
Sbjct: 1 MAEQTEKAFQKQHLFQNAKSKGGKKIATKTKRWYKDVGLGFKTPNEAINGTYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
G VSIRGRIL G HS KM TII+RR YLH++ KY+RYEKRH N+ AH SP FRV+ GD
Sbjct: 61 GDVSIRGRILNGIVHSTKMTNTIIIRREYLHYIPKYRRYEKRHKNLAAHCSPAFRVEIGD 120
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKK 139
V +GQCRPLSKTVRFNV++V ++ G K
Sbjct: 121 QVTVGQCRPLSKTVRFNVVRVSKNKAAKGFAK 152
>gi|241955329|ref|XP_002420385.1| 40S ribosomal protein S11 [Candida dubliniensis CD36]
gi|223643727|emb|CAX41463.1| ribosomal protein, small subunit, putative [Candida dubliniensis
CD36]
Length = 155
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/138 (63%), Positives = 107/138 (77%), Gaps = 10/138 (7%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q+E+AF KQP K R++K +GLGFKTP+ AI+G+YIDKKCPF GTV
Sbjct: 5 LTVQSERAFQKQPHIFTNPKAKANKKTKRWYKDVGLGFKTPKAAIDGSYIDKKCPFAGTV 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRG+IL GT S KM+RTII+RR+YLH+V KY RYEKRH N+ AH+SP FRV+EGD V
Sbjct: 65 SIRGKILTGTVVSTKMHRTIIIRRDYLHYVPKYNRYEKRHKNVAAHVSPAFRVEEGDVVT 124
Query: 111 IGQCRPLSKTVRFNVLKV 128
+GQCRP+SKTVRFNVLKV
Sbjct: 125 VGQCRPISKTVRFNVLKV 142
>gi|119480035|ref|XP_001260046.1| 40S ribosomal protein S11 [Neosartorya fischeri NRRL 181]
gi|119408200|gb|EAW18149.1| 40S ribosomal protein S11 [Neosartorya fischeri NRRL 181]
Length = 160
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/155 (60%), Positives = 113/155 (72%), Gaps = 16/155 (10%)
Query: 1 MAEQTEKAFLKQPGKGGN--------------RFWKSIGLGFKTPREAIEGTYIDKKCPF 46
+ Q+E+AF KQP N R++K +GLGF+TP+ AIEG+YIDKKCPF
Sbjct: 5 LTVQSERAFQKQPHIFLNSKTKAKSKKVGQTRRWYKDVGLGFRTPKTAIEGSYIDKKCPF 64
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
TG VSIRGRIL G S KM+RTII+RR YLH+V KY RYEKRH N+ AH+SP FRV+EG
Sbjct: 65 TGMVSIRGRILTGRVVSTKMHRTIIIRREYLHYVPKYNRYEKRHKNLAAHVSPAFRVEEG 124
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
D V +GQCRPLSKTVRFNVL+V+P +G A K+F
Sbjct: 125 DWVTVGQCRPLSKTVRFNVLRVLP--RTGKAVKSF 157
>gi|324528142|gb|ADY48879.1| 40S ribosomal protein S11 [Ascaris suum]
Length = 158
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/158 (62%), Positives = 111/158 (70%), Gaps = 20/158 (12%)
Query: 1 MAEQTEKAFLKQP----------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKC 44
MAEQTE+AF KQP K R+ ++IGLGFKTPREAI GTYIDKKC
Sbjct: 1 MAEQTERAFQKQPTIFLNNKLRTLGIGKKAKKDVRYVRNIGLGFKTPREAITGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL G KM RTI++RR+YLHFVKKY+RYEKRH N+ H SP FR V
Sbjct: 61 PFTGNVSIRGRILTGVVVKTKMQRTIVIRRDYLHFVKKYRRYEKRHKNMSVHCSPAFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V +G+CRPLSKTVR+NVLKV+ A GAKK F
Sbjct: 121 ALGDIVTVGECRPLSKTVRYNVLKVLKA---SGAKKGF 155
>gi|367013330|ref|XP_003681165.1| 40S ribosomal protein S11 [Torulaspora delbrueckii]
gi|359748825|emb|CCE91954.1| hypothetical protein TDEL_0D03700 [Torulaspora delbrueckii]
Length = 155
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/152 (59%), Positives = 112/152 (73%), Gaps = 13/152 (8%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q+E+AF KQP K R++K+ GLGFKTP+ AIEG+YIDKKCPFTG V
Sbjct: 5 LTVQSERAFQKQPHIFNNPKLKTNKRAKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLV 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRG+IL G S KM+RTI++RR+YLH+V KY RYEKRH N+P H+SP FRV+ GD V
Sbjct: 65 SIRGKILTGVVVSTKMHRTIVIRRDYLHYVPKYNRYEKRHKNVPVHVSPAFRVEVGDIVT 124
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
+GQCRP+SKTVRFNVLKV S+ +KK FT
Sbjct: 125 VGQCRPISKTVRFNVLKV---ASNSKSKKQFT 153
>gi|399217258|emb|CCF73945.1| unnamed protein product [Babesia microti strain RI]
Length = 156
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/148 (63%), Positives = 108/148 (72%), Gaps = 11/148 (7%)
Query: 4 QTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIR 53
QTEKAF KQP GK R+WK +G+GF TP+ A EG YIDKKCPFTG +SIR
Sbjct: 7 QTEKAFQKQPMVSTRKMQTLGKRA-RYWKDVGMGFPTPKAAKEGAYIDKKCPFTGNISIR 65
Query: 54 GRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQ 113
GRI+ G SAKM RTI++R +YLH+V KY R+EKRHSNIPAH SPCF VK+GD V +GQ
Sbjct: 66 GRIIKGMVISAKMKRTIVLRVSYLHYVPKYNRFEKRHSNIPAHCSPCFSVKDGDIVTVGQ 125
Query: 114 CRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
CRPLSKTVRFNVLKV G A+K F
Sbjct: 126 CRPLSKTVRFNVLKVEKNDIFGTARKQF 153
>gi|71895103|ref|NP_001026004.1| 40S ribosomal protein S11 [Gallus gallus]
gi|13516490|dbj|BAB40319.1| ribosomal protein S11 [Gallus gallus]
Length = 158
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 117/158 (74%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+GG R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADTQTERAYQKQPTIFQNKKRALLGEGGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>gi|389608253|dbj|BAM17738.1| ribosomal protein S11 [Papilio xuthus]
gi|389610807|dbj|BAM19014.1| ribosomal protein S11 [Papilio polytes]
Length = 152
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/139 (68%), Positives = 107/139 (76%), Gaps = 11/139 (7%)
Query: 1 MAEQTEKAFLKQPG-----KGG-----NRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
MA+QTEKAF KQ KGG R K++GLGFKTPREAIEGTYIDKKCPFTG V
Sbjct: 1 MADQTEKAFQKQATVFLNRKGGLKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNV 60
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
SIRGRIL G KM RTI++RR+YLH+VKKY R+EKRH N+ H+SPCFR V+ GD V
Sbjct: 61 SIRGRILTGVVQKMKMQRTIVIRRDYLHYVKKYNRFEKRHKNMSVHLSPCFRDVELGDIV 120
Query: 110 IIGQCRPLSKTVRFNVLKV 128
IG+CRPLSKTVRFNVLKV
Sbjct: 121 TIGECRPLSKTVRFNVLKV 139
>gi|330806369|ref|XP_003291143.1| 40S ribosomal protein S11 [Dictyostelium purpureum]
gi|325078704|gb|EGC32341.1| 40S ribosomal protein S11 [Dictyostelium purpureum]
Length = 155
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/155 (61%), Positives = 112/155 (72%), Gaps = 14/155 (9%)
Query: 1 MAE-QTEKAFLKQP-------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MA+ Q EKAF KQ GK G +++K+IGLG++TP++A EGTYIDKKCPF
Sbjct: 1 MADIQAEKAFQKQQVSFKNRYQLKSAKGKEGIKYYKNIGLGYRTPKDAFEGTYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
VSIRG IL GT S KM RT++VRRNYL ++KKY R+EKRHSNIPAH+SPCF VKEG
Sbjct: 61 PSDVSIRGTILRGTVISTKMKRTLVVRRNYLPYIKKYNRFEKRHSNIPAHVSPCFNVKEG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
D V IGQCRPLSKTVRFNV+K +S KAF
Sbjct: 121 DSVTIGQCRPLSKTVRFNVIKHEANAASKKQFKAF 155
>gi|294657598|ref|XP_459891.2| 40S ribosomal protein S11 [Debaryomyces hansenii CBS767]
gi|199432811|emb|CAG88132.2| DEHA2E13486p [Debaryomyces hansenii CBS767]
Length = 155
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/152 (59%), Positives = 111/152 (73%), Gaps = 13/152 (8%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q+E+AF KQP + R++K +GLGFKTP+ AIEG YIDKKCPF G+V
Sbjct: 5 LTVQSERAFQKQPHIFTNPKAKANRKTKRWFKEVGLGFKTPKAAIEGNYIDKKCPFAGSV 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRG+IL GT S KM+RTII+RR+YLH+V KY RYEKRH N+ AH+SP FRV+EGD V+
Sbjct: 65 SIRGKILTGTVVSTKMHRTIIIRRDYLHYVPKYNRYEKRHKNLAAHVSPAFRVQEGDVVV 124
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
+GQCRP+SKTVRFNVLKV S K FT
Sbjct: 125 VGQCRPISKTVRFNVLKV---AVSKSKSKQFT 153
>gi|156097005|ref|XP_001614536.1| 40S ribosomal protein S11 [Plasmodium vivax Sal-1]
gi|221055489|ref|XP_002258883.1| 40s ribosomal protein s11 [Plasmodium knowlesi strain H]
gi|148803410|gb|EDL44809.1| 40S ribosomal protein S11, putative [Plasmodium vivax]
gi|193808953|emb|CAQ39656.1| 40s ribosomal protein s11, putative [Plasmodium knowlesi strain H]
gi|389583425|dbj|GAB66160.1| 40S ribosomal protein S11 [Plasmodium cynomolgi strain B]
Length = 161
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/152 (61%), Positives = 105/152 (69%), Gaps = 13/152 (8%)
Query: 4 QTEKAFLKQPGKG-------------GNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
Q E+A+ KQ G R+WK +GLGF TP+EA EG Y+DKKCPFTG V
Sbjct: 8 QHERAYQKQEGASFFNSKKIKKGSKSYTRYWKKVGLGFATPKEAKEGVYVDKKCPFTGNV 67
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRGRIL G S+KM RTII+RRNYLH+VKKY R+EKRH NIP H SPCF VKEGD V
Sbjct: 68 SIRGRILKGMVISSKMKRTIIIRRNYLHYVKKYNRFEKRHKNIPCHCSPCFDVKEGDIVT 127
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
+GQCRPLSKTVRFNVL V G A+K F
Sbjct: 128 VGQCRPLSKTVRFNVLHVEKHQIFGSARKQFV 159
>gi|22758880|gb|AAN05599.1| ribosomal protein S11 [Argopecten irradians]
Length = 160
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 110/156 (70%), Gaps = 18/156 (11%)
Query: 2 AEQTEKAFLKQ--------------PGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
AEQTEK+F KQ GK R+ KSIGLGFKTPREA +GTYIDKKCPFT
Sbjct: 6 AEQTEKSFQKQNNVFLNKKQSVLSGKGKKNLRYVKSIGLGFKTPREAFDGTYIDKKCPFT 65
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
G VSIRGRIL G KM RTI++RR+YLH+VKKY R+EKRH N+ HISPCFR V G
Sbjct: 66 GNVSIRGRILTGVVMKMKMQRTIVIRRDYLHYVKKYNRFEKRHKNMSVHISPCFRDVMPG 125
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
D V +G+CRPLSKTVR+NVLKV G+KK F+
Sbjct: 126 DVVTVGECRPLSKTVRYNVLKV---SKGAGSKKGFS 158
>gi|213401189|ref|XP_002171367.1| 40S ribosomal protein S11 [Schizosaccharomyces japonicus yFS275]
gi|211999414|gb|EEB05074.1| 40S ribosomal protein S11 [Schizosaccharomyces japonicus yFS275]
Length = 153
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/137 (63%), Positives = 103/137 (75%), Gaps = 8/137 (5%)
Query: 1 MAEQTEKAFLKQP--------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSI 52
+ Q+E+AF KQP G R++K +GLGFKTP EAI G YIDKKCPF G VSI
Sbjct: 5 LVVQSERAFQKQPHIFQNAKKAAGNRRWYKDVGLGFKTPSEAIRGEYIDKKCPFVGQVSI 64
Query: 53 RGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
RGRIL GT S KM+RT+++RR YLHF+ KY RYEKRH N+ AH+SP FRV EGD V +G
Sbjct: 65 RGRILTGTVVSTKMHRTVVIRREYLHFIPKYNRYEKRHKNLSAHLSPAFRVSEGDVVTVG 124
Query: 113 QCRPLSKTVRFNVLKVI 129
QCRPLSKTVRFNVL+V+
Sbjct: 125 QCRPLSKTVRFNVLRVV 141
>gi|312094588|ref|XP_003148073.1| 40S ribosomal protein S11 [Loa loa]
gi|307756761|gb|EFO15995.1| 40S ribosomal protein S11 [Loa loa]
Length = 158
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 112/158 (70%), Gaps = 20/158 (12%)
Query: 1 MAEQTEKAFLKQP----------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKC 44
MAEQTE+AF KQP K R+ +++GLGFKTPREAI GTYIDKKC
Sbjct: 1 MAEQTERAFQKQPTVFLNSKLRTLGIGKKAKKDVRYVRNVGLGFKTPREAITGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL G KM RTI++RR+YLHF+KKY+RYEKRH N+ H SP FR +
Sbjct: 61 PFTGNVSIRGRILTGVVVKMKMQRTIVIRRDYLHFIKKYRRYEKRHRNMSVHCSPAFRDI 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V +G+CRPLSKTVR+NVLKV+ A GAKK+F
Sbjct: 121 AVGDIVTVGECRPLSKTVRYNVLKVLKA---SGAKKSF 155
>gi|358335868|dbj|GAA54467.1| small subunit ribosomal protein S11e [Clonorchis sinensis]
Length = 153
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/147 (61%), Positives = 109/147 (74%), Gaps = 3/147 (2%)
Query: 1 MAEQTEKAFLKQP--GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILA 58
MAEQ E AF KQ GK G R++KSIGLG+KTP+EAI GTYIDKKCPFTG V IRGRIL
Sbjct: 1 MAEQKENAFQKQEIKGKKGGRYYKSIGLGYKTPKEAIFGTYIDKKCPFTGNVRIRGRILT 60
Query: 59 GTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPL 117
G KMNRTI++RR+Y+ +VKKY RYEKRH N+ H+SPCFR V GD V +G+CRPL
Sbjct: 61 GVVRKMKMNRTIVIRRDYMKYVKKYNRYEKRHKNMSVHLSPCFRDVSVGDTVTVGECRPL 120
Query: 118 SKTVRFNVLKVIPAGSSGGAKKAFTAM 144
SKTV FNV+KV+ A ++ F +
Sbjct: 121 SKTVSFNVIKVLKAPGHRTDREFFVGL 147
>gi|395334358|gb|EJF66734.1| hypothetical protein DICSQDRAFT_164575 [Dichomitus squalens
LYAD-421 SS1]
Length = 154
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/141 (64%), Positives = 106/141 (75%), Gaps = 13/141 (9%)
Query: 1 MAEQTEKAFLKQP------GKGGN-------RFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MAEQ EKAF KQP +GG R++K +GLGFKTP EAI G+YIDKKCPFT
Sbjct: 1 MAEQIEKAFQKQPIFHNAKARGGKKVSTKEKRWYKDVGLGFKTPSEAIHGSYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
G VSIRGRIL G S KM RT+I+RR+YLH++ KY RYEKRH N+ AH+SP FRV+ GD
Sbjct: 61 GEVSIRGRILTGRVISTKMTRTVIIRRDYLHYIPKYNRYEKRHKNLAAHVSPAFRVEIGD 120
Query: 108 HVIIGQCRPLSKTVRFNVLKV 128
V +GQCRPLSKTVRFNVL+V
Sbjct: 121 VVTVGQCRPLSKTVRFNVLRV 141
>gi|170586864|ref|XP_001898199.1| 40S ribosomal protein S11 [Brugia malayi]
gi|158594594|gb|EDP33178.1| 40S ribosomal protein S11, putative [Brugia malayi]
gi|402594780|gb|EJW88706.1| 40S ribosomal protein S11 [Wuchereria bancrofti]
Length = 158
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 112/158 (70%), Gaps = 20/158 (12%)
Query: 1 MAEQTEKAFLKQP----------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKC 44
MAEQTE+AF KQP K R+ +++GLGFKTPREAI GTYIDKKC
Sbjct: 1 MAEQTERAFQKQPTVFLNNKLRTLGIGKKAKKDVRYVRNVGLGFKTPREAITGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL G KM RTI++RR+YLHF+KKY+RYEKRH N+ H SP FR +
Sbjct: 61 PFTGNVSIRGRILTGVVVKMKMQRTIVIRRDYLHFIKKYRRYEKRHRNMSVHCSPAFRDI 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V +G+CRPLSKTVR+NVLKV+ A GAKK+F
Sbjct: 121 AVGDIVTVGECRPLSKTVRYNVLKVLKA---SGAKKSF 155
>gi|366988437|ref|XP_003673985.1| hypothetical protein NCAS_0A10460 [Naumovozyma castellii CBS 4309]
gi|366996835|ref|XP_003678180.1| hypothetical protein NCAS_0I01700 [Naumovozyma castellii CBS 4309]
gi|342299848|emb|CCC67604.1| hypothetical protein NCAS_0A10460 [Naumovozyma castellii CBS 4309]
gi|342304051|emb|CCC71838.1| hypothetical protein NCAS_0I01700 [Naumovozyma castellii CBS 4309]
Length = 156
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/151 (60%), Positives = 112/151 (74%), Gaps = 12/151 (7%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q+E+AF KQP + R++K+ GLGFKTP+ AIEG+YIDKKCPFTG V
Sbjct: 5 LTVQSERAFQKQPHIFTNPKVKTSRRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLV 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRG+IL GT S KM+RTI++RR+YLH+V KY RYEKRH N+P H+SP FRV+ GD V
Sbjct: 65 SIRGKILTGTVVSTKMHRTIVIRRDYLHYVPKYNRYEKRHKNVPVHVSPAFRVQVGDIVT 124
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GQCRP+SKTVRFNV+KV PA +G A K F
Sbjct: 125 AGQCRPISKTVRFNVVKVSPA--AGKANKQF 153
>gi|344229957|gb|EGV61842.1| hypothetical protein CANTEDRAFT_125064 [Candida tenuis ATCC 10573]
gi|344229958|gb|EGV61843.1| hypothetical protein CANTEDRAFT_125064 [Candida tenuis ATCC 10573]
Length = 155
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/138 (62%), Positives = 106/138 (76%), Gaps = 10/138 (7%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q + AF KQP K R++K +GLGFKTP+ AIEGTYIDKKCPF G V
Sbjct: 5 LTVQNQDAFQKQPHIFTNPKAKANKKTKRWFKDVGLGFKTPKTAIEGTYIDKKCPFVGDV 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRG+IL+GT S KM+RTII+RR+YLH+V KY RYEKRH N+ AH+SP FRV+EGD V+
Sbjct: 65 SIRGKILSGTVVSTKMHRTIIIRRDYLHYVPKYNRYEKRHKNLAAHVSPAFRVQEGDTVV 124
Query: 111 IGQCRPLSKTVRFNVLKV 128
+GQCRP+SKTVRFNVL++
Sbjct: 125 VGQCRPISKTVRFNVLRI 142
>gi|350538079|ref|NP_001232080.1| putative ribosomal protein S11 [Taeniopygia guttata]
gi|197127145|gb|ACH43643.1| putative ribosomal protein S11 [Taeniopygia guttata]
Length = 158
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 117/158 (74%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+GG R+++++GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADTQTERAYQKQPTIFQNKKRVLLGEGGKEKLPRYYRNVGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RTII+RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIIIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>gi|403371788|gb|EJY85778.1| 40S ribosomal protein rpS11e [Oxytricha trifallax]
Length = 158
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/155 (60%), Positives = 108/155 (69%), Gaps = 14/155 (9%)
Query: 1 MAE-QTEKAFLKQPG-------------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MA+ QTE+AF KQ G G R++K IGLGFKTP EAIEG Y+DKKCPF
Sbjct: 1 MADIQTERAFQKQTGVFLNSKKLLAKKTTAGVRYFKKIGLGFKTPTEAIEGHYVDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
T TVSIRGRI G S KM RTII+RR+YLH+VKKY R+EKRH+N H SP FRV+EG
Sbjct: 61 TSTVSIRGRIFKGVVLSTKMKRTIIIRRDYLHYVKKYTRFEKRHNNFSVHCSPAFRVREG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
D V +GQCRPLSKTVRFNVL+V G +K F
Sbjct: 121 DVVTVGQCRPLSKTVRFNVLRVEAKRIEGNVRKQF 155
>gi|317134973|gb|ADV03049.1| ribosomal protein S11 [Amphidinium carterae]
Length = 157
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/153 (60%), Positives = 107/153 (69%), Gaps = 14/153 (9%)
Query: 3 EQTEKAFLKQP--------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTG 48
+QTE+AF KQ GK R+WK+IGLGF TP+EA EG YIDKKCPFTG
Sbjct: 2 DQTERAFQKQDAVFLGAKRLLGKKAGKKAVRWWKNIGLGFTTPKEAKEGRYIDKKCPFTG 61
Query: 49 TVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDH 108
VSIRGRIL G C S KM TII+RRNYLH+++K+ R+EKRH N+ H SPCF VKEGD
Sbjct: 62 NVSIRGRILKGMCISNKMKNTIIIRRNYLHYIRKFNRFEKRHKNVAVHCSPCFDVKEGDI 121
Query: 109 VIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GQCRPLSKTVRFNV+KV G A+K F
Sbjct: 122 ITAGQCRPLSKTVRFNVVKVDKNQIFGTARKQF 154
>gi|148228908|ref|NP_001080676.1| 40S ribosomal protein S11 [Xenopus laevis]
gi|32450493|gb|AAH53813.1| Rps11 protein [Xenopus laevis]
Length = 158
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 116/158 (73%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+ G R+++S+GLGFKTPREAI+GTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLQGETGKEKLPRYYRSVGLGFKTPREAIDGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 QVGDTVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>gi|383849427|ref|XP_003700346.1| PREDICTED: 40S ribosomal protein S11-like [Megachile rotundata]
Length = 155
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/155 (60%), Positives = 113/155 (72%), Gaps = 17/155 (10%)
Query: 1 MAEQTEKAFLKQPGKGGNR-------------FWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MA+QTE+AF KQP NR + +++GLGFKTPREAIEGTYIDKKCPFT
Sbjct: 1 MADQTERAFQKQPTIFLNRKKGLGPKRRKPMRYSRNVGLGFKTPREAIEGTYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
G +SIRGRIL G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ G
Sbjct: 61 GNISIRGRILTGVVQKMKMQRTIVIRRDYLHYIRKYNRFEKRHRNMSVHLSPCFRDVEIG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
D V IG+CRPLSKTVRFNVLKV G+KK+F
Sbjct: 121 DVVTIGECRPLSKTVRFNVLKV---SKGTGSKKSF 152
>gi|449018221|dbj|BAM81623.1| 40S ribosomal protein S11 [Cyanidioschyzon merolae strain 10D]
Length = 158
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/154 (61%), Positives = 109/154 (70%), Gaps = 13/154 (8%)
Query: 4 QTEKAFLKQPGKGGN-----------RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSI 52
QTE+AF KQ N R++KSIGLG K PREAIEGTYIDKKCPFT VSI
Sbjct: 5 QTERAFQKQEAVSLNGPAVRFHGARKRWYKSIGLGIKIPREAIEGTYIDKKCPFTSNVSI 64
Query: 53 RGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
RGRIL G S KM RT+IVRR+YLH+V KY+RYE+RH NIP H +PCFR++EGD V IG
Sbjct: 65 RGRILRGVVVSTKMTRTVIVRRDYLHWVAKYRRYERRHRNIPCHAAPCFRLQEGDIVTIG 124
Query: 113 QCRPLSKTVRFNVLKVI--PAGSSGGAKKAFTAM 144
QCRPLSKTVRFNV++V G KK FT +
Sbjct: 125 QCRPLSKTVRFNVIRVDRSAGGKDRTGKKMFTGL 158
>gi|344301773|gb|EGW32078.1| hypothetical protein SPAPADRAFT_61162 [Spathaspora passalidarum
NRRL Y-27907]
Length = 155
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/138 (63%), Positives = 105/138 (76%), Gaps = 10/138 (7%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q+E+AF KQP + R++K +GLGFKTP+ AIEG YIDKKCPF GT+
Sbjct: 5 LTVQSERAFQKQPHIFTNPKAKANRKTKRWYKEVGLGFKTPKTAIEGHYIDKKCPFVGTI 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRG+IL GT S KM+RTII+RR+YLH+V KY RYEKRH N+ AH+SP FRV EGD V
Sbjct: 65 SIRGKILTGTVVSTKMHRTIIIRRDYLHYVPKYNRYEKRHKNVAAHLSPAFRVSEGDVVT 124
Query: 111 IGQCRPLSKTVRFNVLKV 128
+GQCRPLSKTVRFNVLKV
Sbjct: 125 VGQCRPLSKTVRFNVLKV 142
>gi|70937128|ref|XP_739413.1| 40S ribosomal protein S11 [Plasmodium chabaudi chabaudi]
gi|56516394|emb|CAH75475.1| 40S ribosomal protein S11, putative [Plasmodium chabaudi chabaudi]
Length = 161
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/152 (60%), Positives = 105/152 (69%), Gaps = 13/152 (8%)
Query: 4 QTEKAFLKQPG-------------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
Q E+A+ KQ G K R+WK++G+GF P+EA EG Y+DKKCPFTG V
Sbjct: 8 QHERAYQKQEGASFFNSKKIKKGSKTHTRYWKNVGMGFAVPKEAKEGVYVDKKCPFTGNV 67
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRGRIL G S KM RTII+RRNYLH+VKKY R+EKRH NIP H SPCF VKEGD V
Sbjct: 68 SIRGRILKGMVISNKMKRTIIIRRNYLHYVKKYNRFEKRHKNIPCHCSPCFDVKEGDIVT 127
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
+GQCRPLSKTVRFNVL V G A+K F
Sbjct: 128 VGQCRPLSKTVRFNVLHVEKHQIFGSARKQFV 159
>gi|730626|sp|P41115.1|RS11_XENLA RecName: Full=40S ribosomal protein S11
gi|551286|emb|CAA55387.1| ribosomal protein S11 [Xenopus laevis]
Length = 158
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 116/158 (73%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+ G R+++S+GLGFKTPREAI+GTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLEGETGKEKLPRYYRSVGLGFKTPREAIDGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 QVGDTVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>gi|196011439|ref|XP_002115583.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190581871|gb|EDV21946.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 154
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/146 (62%), Positives = 105/146 (71%), Gaps = 13/146 (8%)
Query: 1 MAEQTEKAFLKQPG------------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTG 48
MAEQ EKA+ KQP + R+ ++IGLGFKTPREA EGTYIDKKCPFTG
Sbjct: 1 MAEQIEKAYQKQPTIFQNKKNVLATKRKDRRYVRNIGLGFKTPREATEGTYIDKKCPFTG 60
Query: 49 TVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF-RVKEGD 107
VSIRGRIL G KM RTI++RR+YLH++KKY RYEKRH N+ H+SPCF V+ GD
Sbjct: 61 NVSIRGRILTGVVAKMKMRRTIVIRRDYLHYIKKYNRYEKRHKNLAVHLSPCFPDVQLGD 120
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGS 133
V +GQCRPLSKTVRFNVLKV S
Sbjct: 121 TVTVGQCRPLSKTVRFNVLKVTKQQS 146
>gi|45185139|ref|NP_982856.1| 40S ribosomal protein S11 [Ashbya gossypii ATCC 10895]
gi|44980775|gb|AAS50680.1| ABL091Cp [Ashbya gossypii ATCC 10895]
gi|374106058|gb|AEY94968.1| FABL091Cp [Ashbya gossypii FDAG1]
Length = 156
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/152 (59%), Positives = 111/152 (73%), Gaps = 12/152 (7%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q E+AF KQP + R++K+ GLGFKTP+ AIEG+YIDKKCPFTG V
Sbjct: 5 LTVQAERAFQKQPHIFTNPKAKANRRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLV 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRG+IL GT S KM+RTII+RR+YLH+V KY RYEKRH N+P H+SP FRV+ GD V
Sbjct: 65 SIRGKILTGTVVSTKMHRTIIIRRDYLHYVPKYNRYEKRHKNVPVHVSPAFRVQLGDIVT 124
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
+GQCRP+SKTVRFNVLKV A ++ K FT
Sbjct: 125 VGQCRPISKTVRFNVLKV--ASAANKNNKQFT 154
>gi|50344480|emb|CAH04326.1| S11e ribosomal protein [Cicindela littoralis]
Length = 152
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/152 (62%), Positives = 111/152 (73%), Gaps = 14/152 (9%)
Query: 1 MAEQTEKAFLKQPGKGGNR----------FWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
MA+QTE+AF KQ NR +++IGLGFKTPREAIEGTYIDKKCPFTG V
Sbjct: 1 MADQTERAFQKQGNVNLNRKSTLKKKKLRHFRNIGLGFKTPREAIEGTYIDKKCPFTGNV 60
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
SIRGRIL G KM RTI++RR+Y H++KKY R+EKRH NI H+SPCFR V+ GD V
Sbjct: 61 SIRGRILTGVVQKMKMQRTIVIRRDYPHYIKKYNRFEKRHRNISVHLSPCFRDVEIGDVV 120
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IG+CRPLSKTVRFNVLKV G+KK+F
Sbjct: 121 TIGECRPLSKTVRFNVLKV---SKGTGSKKSF 149
>gi|321471988|gb|EFX82959.1| hypothetical protein DAPPUDRAFT_230714 [Daphnia pulex]
Length = 152
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 94/152 (61%), Positives = 111/152 (73%), Gaps = 14/152 (9%)
Query: 1 MAEQTEKAFLKQPG-----KGGN-----RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
MA+Q EK+F KQP K G R+ +++GLGFKTPREAIEGTYIDKKCPFTG V
Sbjct: 1 MADQNEKSFQKQPTVFLNKKSGKKQKNLRYHRNVGLGFKTPREAIEGTYIDKKCPFTGDV 60
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
SIRGRIL G KM RTI++RR+YLH++KKY R+EKRH N+ H SPCFR V D V
Sbjct: 61 SIRGRILTGVVQKMKMQRTIVIRRDYLHYIKKYNRFEKRHRNMSVHCSPCFRDVALNDVV 120
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IG+CRPL+KTVRFNVLKV + GAKK+F
Sbjct: 121 TIGECRPLAKTVRFNVLKV---NKAAGAKKSF 149
>gi|194462961|gb|ACF72875.1| unknown [Ochlerotatus taeniorhynchus]
Length = 152
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 94/153 (61%), Positives = 109/153 (71%), Gaps = 14/153 (9%)
Query: 1 MAEQTEKAFLKQPG----------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
MA+Q E+AF KQ G K G R SIGLGFKTP+EAI GTYIDKKCPFTG +
Sbjct: 1 MADQNERAFQKQTGVNLNRKQVNKKKGLRLHHSIGLGFKTPKEAINGTYIDKKCPFTGHI 60
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
+IRGRIL G KM RTI++RR+YLHFV+KY R+EKRH N+ H+SPCFR V+ GD V
Sbjct: 61 AIRGRILNGVVRKMKMQRTIVIRRDYLHFVRKYDRFEKRHRNLSVHLSPCFRDVEAGDIV 120
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
+G+CRPLSKTVRFNVLKV GAKK F
Sbjct: 121 TVGECRPLSKTVRFNVLKV---SKVAGAKKKFN 150
>gi|353241746|emb|CCA73540.1| probable RPS11B-ribosomal protein S11B [Piriformospora indica DSM
11827]
Length = 154
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/154 (61%), Positives = 111/154 (72%), Gaps = 16/154 (10%)
Query: 1 MAEQTEKAFLKQ------PGKGGN-------RFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MAEQ EK+F KQ +GG R++K IGLG+KTP+EAI GTYIDKKCPFT
Sbjct: 1 MAEQIEKSFQKQNIFQNAKVRGGKKVVTRERRWYKDIGLGYKTPQEAINGTYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
VSIRGRIL G S KMNRTII+RR+YLHF+ KY RYEKRH N+ AH+SP FRV+ GD
Sbjct: 61 SEVSIRGRILTGRVVSTKMNRTIIIRRDYLHFIPKYHRYEKRHKNLAAHVSPAFRVELGD 120
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V +GQCRPLSKTVRFNV++V + A KAF
Sbjct: 121 TVTVGQCRPLSKTVRFNVIRV---SKNKAAAKAF 151
>gi|229367092|gb|ACQ58526.1| 40S ribosomal protein S11 [Anoplopoma fimbria]
Length = 161
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 97/161 (60%), Positives = 114/161 (70%), Gaps = 23/161 (14%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN-------RFWKSIGLGFKTPREAIEGTYID 41
MA+ QTE+A+ KQP GG R+ KS+GLGFKTPREAI+GTYID
Sbjct: 1 MADAQTERAYQKQPTIFQNKKRVLVADGGKEVKEKLPRYHKSVGLGFKTPREAIDGTYID 60
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
KKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH NI H+SPCF
Sbjct: 61 KKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNISVHLSPCF 120
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
R V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 121 RDVSVGDIVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 158
>gi|70909519|emb|CAJ17183.1| ribosomal protein S11e [Eucinetus sp. APV-2005]
Length = 154
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/154 (61%), Positives = 112/154 (72%), Gaps = 16/154 (10%)
Query: 1 MAEQTEKAFLKQP--------GKGGNR----FWKSIGLGFKTPREAIEGTYIDKKCPFTG 48
MA+Q EKAF +QP G GG R + + +GLGFKTPREAIEGTYIDKKCPFTG
Sbjct: 1 MADQNEKAFQRQPTVFLNRKKGLGGKRKSLRYHREVGLGFKTPREAIEGTYIDKKCPFTG 60
Query: 49 TVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGD 107
VSIRGRIL G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD
Sbjct: 61 NVSIRGRILTGVVMKMKMQRTIVIRRDYLHYIRKYNRFEKRHRNMSVHLSPCFRDVEIGD 120
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IG+CRPLSKTVRFNVLKV S AKK+F
Sbjct: 121 IATIGECRPLSKTVRFNVLKVTKGVS---AKKSF 151
>gi|116488052|gb|ABJ98608.1| 40S ribosomal protein S11 [Scophthalmus maximus]
Length = 161
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 97/161 (60%), Positives = 114/161 (70%), Gaps = 23/161 (14%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN-------RFWKSIGLGFKTPREAIEGTYID 41
MA+ QTE+A+ KQP GG R+ KS+GLGFKTPREAI+GTYID
Sbjct: 1 MADAQTERAYQKQPTIFQNKKRVLIADGGKEAKEKLPRYHKSVGLGFKTPREAIDGTYID 60
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
KKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH NI H+SPCF
Sbjct: 61 KKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNISVHLSPCF 120
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
R V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 121 RDVSVGDIVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 158
>gi|328899728|gb|AEB54646.1| ribosomal protein S11 [Procambarus clarkii]
Length = 153
Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/152 (63%), Positives = 109/152 (71%), Gaps = 16/152 (10%)
Query: 3 EQTEKAFLKQPG----------KGGN--RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+QTEKAF KQP KGG R + +GLGFKTPREA+EGTYIDKKCPFTG V
Sbjct: 2 DQTEKAFQKQPTVFLNSKTAKEKGGKTKRHLRKVGLGFKTPREAVEGTYIDKKCPFTGNV 61
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
SIRGRIL G KM RTI +RR+YLH+VKKY R+EKRH N+ H+SPCFR VK GD V
Sbjct: 62 SIRGRILTGVVRKMKMQRTITIRRDYLHYVKKYNRFEKRHRNMSVHLSPCFRDVKPGDIV 121
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 122 TVGECRPLSKTVRFNVLKVSKA---PGTKKQF 150
>gi|328677085|gb|AEB31265.1| 40S ribosomal protein S11 [Epinephelus bruneus]
Length = 161
Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/161 (60%), Positives = 114/161 (70%), Gaps = 23/161 (14%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN-------RFWKSIGLGFKTPREAIEGTYID 41
MA+ QTE+A+ KQP GG R+ KS+GLGFKTPREAI+GTYID
Sbjct: 1 MADAQTERAYQKQPTIFQNKKRVLVADGGKEVKEKLPRYHKSVGLGFKTPREAIDGTYID 60
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
KKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH NI H+SPCF
Sbjct: 61 KKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNISVHLSPCF 120
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
R V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 121 RDVMVGDIVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 158
>gi|166952361|gb|ABZ04263.1| ribosomal protein rps11 [Lineus viridis]
Length = 157
Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 96/157 (61%), Positives = 115/157 (73%), Gaps = 19/157 (12%)
Query: 1 MAE-QTEKAFLKQPGKGGN--------------RFWKSIGLGFKTPREAIEGTYIDKKCP 45
MA+ QTEKAF KQP N R++KS+GLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MADHQTEKAFQKQPTIFLNKKKALLGSKAPKHPRYYKSVGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VK 104
FTG V+IRGRIL+GT KM RTI++RR+YLH+V+KY R+EKRH N+ H+SPCFR VK
Sbjct: 61 FTGNVNIRGRILSGTVLKMKMQRTIVIRRDYLHYVRKYNRFEKRHKNMSVHLSPCFRDVK 120
Query: 105 EGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V +G+CRPLSKTV+FNV+KV G+KK F
Sbjct: 121 LGDIVTVGECRPLSKTVKFNVVKVT---KGSGSKKGF 154
>gi|387018336|gb|AFJ51286.1| 40S ribosomal protein S11 [Crotalus adamanteus]
Length = 158
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 115/158 (72%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G G R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADTQTERAYQKQPTIFQNKKRVLLGDAGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>gi|66792924|ref|NP_001019739.1| 40S ribosomal protein S11 [Bos taurus]
gi|58760444|gb|AAW82130.1| ribosomal protein S11 [Bos taurus]
Length = 158
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 116/158 (73%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+ G R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKVKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>gi|60653355|gb|AAX29372.1| ribosomal protein S11 [synthetic construct]
Length = 159
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 116/158 (73%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+ G R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>gi|6319522|ref|NP_009604.1| ribosomal 40S subunit protein S11B [Saccharomyces cerevisiae S288c]
gi|398365071|ref|NP_010308.3| ribosomal 40S subunit protein S11A [Saccharomyces cerevisiae S288c]
gi|338819314|sp|P0CX47.1|RS11A_YEAST RecName: Full=40S ribosomal protein S11-A; AltName: Full=RP41;
AltName: Full=S18; AltName: Full=YS12
gi|338819315|sp|P0CX48.1|RS11B_YEAST RecName: Full=40S ribosomal protein S11-B; AltName: Full=RP41;
AltName: Full=S18; AltName: Full=YS12
gi|313103680|pdb|3IZB|P Chain P, Localization Of The Small Subunit Ribosomal Proteins Into
A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
Translating 80s Ribosome
gi|315113453|pdb|3O2Z|F Chain F, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
Of The First 80s In The Asymmetric Unit.
gi|315113481|pdb|3O30|F Chain F, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
Of The Second 80s In The Asymmetric Unit.
gi|364506107|pdb|3U5C|L Chain L, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome A
gi|364506145|pdb|3U5G|L Chain L, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome B
gi|295653|gb|AAC37411.1| ribosomal protein S18 [Saccharomyces cerevisiae]
gi|311132|gb|AAC37410.1| ribosomal protein S18 [Saccharomyces cerevisiae]
gi|602085|emb|CAA84990.1| RPS18B [Saccharomyces cerevisiae]
gi|642297|emb|CAA87804.1| Rps18ap [Saccharomyces cerevisiae]
gi|1216233|emb|CAA65218.1| 40S ribosomal protein [Saccharomyces cerevisiae]
gi|1431458|emb|CAA98846.1| RPS11A [Saccharomyces cerevisiae]
gi|151942012|gb|EDN60368.1| ribosomal protein S11A [Saccharomyces cerevisiae YJM789]
gi|151946439|gb|EDN64661.1| ribosomal protein S11B [Saccharomyces cerevisiae YJM789]
gi|190405002|gb|EDV08269.1| ribosomal protein S11A [Saccharomyces cerevisiae RM11-1a]
gi|190408788|gb|EDV12053.1| ribosomal protein S11B [Saccharomyces cerevisiae RM11-1a]
gi|259145270|emb|CAY78534.1| Rps11ap [Saccharomyces cerevisiae EC1118]
gi|285810383|tpg|DAA07168.1| TPA: ribosomal 40S subunit protein S11B [Saccharomyces cerevisiae
S288c]
gi|285811046|tpg|DAA11870.1| TPA: ribosomal 40S subunit protein S11A [Saccharomyces cerevisiae
S288c]
gi|290878064|emb|CBK39123.1| Rps11bp [Saccharomyces cerevisiae EC1118]
gi|349576426|dbj|GAA21597.1| K7_Rps11bp [Saccharomyces cerevisiae Kyokai no. 7]
gi|349577094|dbj|GAA22263.1| K7_Rps11ap [Saccharomyces cerevisiae Kyokai no. 7]
gi|392300138|gb|EIW11229.1| Rps11bp [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 156
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 89/151 (58%), Positives = 112/151 (74%), Gaps = 12/151 (7%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q+E+AF KQP K R++K+ GLGFKTP+ AIEG+YIDKKCPFTG V
Sbjct: 5 LTVQSERAFQKQPHIFNNPKVKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLV 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRG+IL GT S KM+RTI++RR YLH++ KY RYEKRH N+P H+SP FRV+ GD V
Sbjct: 65 SIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFRVQVGDIVT 124
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+GQCRP+SKTVRFNV+KV + ++G A K F
Sbjct: 125 VGQCRPISKTVRFNVVKV--SAAAGKANKQF 153
>gi|432101336|gb|ELK29561.1| 40S ribosomal protein S11 [Myotis davidii]
Length = 158
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 115/158 (72%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP GK G R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGKTGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRLEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>gi|417408237|gb|JAA50682.1| Putative 40s ribosomal protein s11 isoform 1, partial [Desmodus
rotundus]
Length = 161
Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 116/158 (73%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+ G R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 4 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 63
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 64 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 123
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 124 QIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 158
>gi|156844754|ref|XP_001645438.1| hypothetical protein Kpol_1061p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156116101|gb|EDO17580.1| hypothetical protein Kpol_1061p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 155
Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 88/138 (63%), Positives = 106/138 (76%), Gaps = 10/138 (7%)
Query: 1 MAEQTEKAFLKQPGKGGN----------RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q+E+AF KQP N R++K++GLGFKTP+ AIEGTYIDKKCPFTG V
Sbjct: 5 LTVQSERAFQKQPHIFSNPKFKTSRRTKRWYKNVGLGFKTPKTAIEGTYIDKKCPFTGMV 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRG+IL GT S KM+RTI++RR+YLH+V KY RYEKRH N+P H+SP FRV+ GD V
Sbjct: 65 SIRGKILTGTVVSTKMHRTIVIRRDYLHYVPKYNRYEKRHKNVPVHVSPAFRVEVGDIVT 124
Query: 111 IGQCRPLSKTVRFNVLKV 128
GQCRP+SKTVRFNVLKV
Sbjct: 125 AGQCRPISKTVRFNVLKV 142
>gi|4506681|ref|NP_001006.1| 40S ribosomal protein S11 [Homo sapiens]
gi|13592071|ref|NP_112372.1| 40S ribosomal protein S11 [Rattus norvegicus]
gi|21426889|ref|NP_038753.1| 40S ribosomal protein S11 [Mus musculus]
gi|307691227|ref|NP_001182683.1| ribosomal protein S11 [Macaca mulatta]
gi|346227226|ref|NP_001230999.1| 40S ribosomal protein S11 [Sus scrofa]
gi|73947970|ref|XP_533619.2| PREDICTED: 40S ribosomal protein S11 isoform 3 [Canis lupus
familiaris]
gi|114599448|ref|XP_001137522.1| PREDICTED: 40S ribosomal protein S11-like isoform 2 [Pan
troglodytes]
gi|114678493|ref|XP_001173045.1| PREDICTED: 40S ribosomal protein S11 isoform 9 [Pan troglodytes]
gi|291386783|ref|XP_002709911.1| PREDICTED: ribosomal protein S11-like [Oryctolagus cuniculus]
gi|291386963|ref|XP_002709974.1| PREDICTED: ribosomal protein S11-like [Oryctolagus cuniculus]
gi|296234349|ref|XP_002762394.1| PREDICTED: 40S ribosomal protein S11-like isoform 2 [Callithrix
jacchus]
gi|301764967|ref|XP_002917884.1| PREDICTED: 40S ribosomal protein S11-like [Ailuropoda melanoleuca]
gi|332241303|ref|XP_003269821.1| PREDICTED: 40S ribosomal protein S11 isoform 1 [Nomascus
leucogenys]
gi|344270053|ref|XP_003406860.1| PREDICTED: 40S ribosomal protein S11-like [Loxodonta africana]
gi|348559514|ref|XP_003465561.1| PREDICTED: 40S ribosomal protein S11-like [Cavia porcellus]
gi|354493136|ref|XP_003508700.1| PREDICTED: 40S ribosomal protein S11-like [Cricetulus griseus]
gi|395858348|ref|XP_003801533.1| PREDICTED: 40S ribosomal protein S11 [Otolemur garnettii]
gi|397486525|ref|XP_003814378.1| PREDICTED: 40S ribosomal protein S11 isoform 1 [Pan paniscus]
gi|397486527|ref|XP_003814379.1| PREDICTED: 40S ribosomal protein S11 isoform 2 [Pan paniscus]
gi|397486529|ref|XP_003814380.1| PREDICTED: 40S ribosomal protein S11 isoform 3 [Pan paniscus]
gi|397486531|ref|XP_003814381.1| PREDICTED: 40S ribosomal protein S11 isoform 4 [Pan paniscus]
gi|402906318|ref|XP_003915949.1| PREDICTED: 40S ribosomal protein S11 [Papio anubis]
gi|403299256|ref|XP_003940405.1| PREDICTED: 40S ribosomal protein S11 [Saimiri boliviensis
boliviensis]
gi|410039207|ref|XP_003950569.1| PREDICTED: 40S ribosomal protein S11-like [Pan troglodytes]
gi|410982422|ref|XP_003997556.1| PREDICTED: 40S ribosomal protein S11 [Felis catus]
gi|426243143|ref|XP_004015421.1| PREDICTED: 40S ribosomal protein S11 [Ovis aries]
gi|426389613|ref|XP_004061214.1| PREDICTED: 40S ribosomal protein S11 [Gorilla gorilla gorilla]
gi|47117088|sp|P61270.3|RS11_MACFA RecName: Full=40S ribosomal protein S11
gi|50403609|sp|P62280.3|RS11_HUMAN RecName: Full=40S ribosomal protein S11
gi|54039305|sp|P62282.3|RS11_RAT RecName: Full=40S ribosomal protein S11
gi|54039310|sp|P62281.3|RS11_MOUSE RecName: Full=40S ribosomal protein S11
gi|108860952|sp|Q3T0V4.3|RS11_BOVIN RecName: Full=40S ribosomal protein S11
gi|187609269|pdb|2ZKQ|QQ Chain q, Structure Of A Mammalian Ribosomal 40s Subunit Within An
80s Complex Obtained By Docking Homology Models Of The
Rna And Proteins Into An 8.7 A Cryo-Em Map
gi|36144|emb|CAA29834.1| unnamed protein product [Homo sapiens]
gi|206739|gb|AAA42076.1| ribosomal protein S11 [Rattus norvegicus]
gi|1938406|gb|AAB52256.1| ribosomal protein S11 [Mus musculus]
gi|6552366|dbj|BAA88215.1| ribosomal protein S11 [Homo sapiens]
gi|6552368|dbj|BAA88216.1| ribosomal protein S11 [Mus musculus]
gi|13938309|gb|AAH07283.1| Ribosomal protein S11 [Homo sapiens]
gi|14043227|gb|AAH07603.1| Ribosomal protein S11 [Homo sapiens]
gi|14044037|gb|AAH07945.1| RPS11 protein [Homo sapiens]
gi|14603118|gb|AAH10028.1| Ribosomal protein S11 [Homo sapiens]
gi|15215036|gb|AAH12641.1| Ribosomal protein S11 [Mus musculus]
gi|16741056|gb|AAH16378.1| Ribosomal protein S11 [Homo sapiens]
gi|24059822|dbj|BAC21649.1| ribosomal protein S11 [Macaca fascicularis]
gi|47682674|gb|AAH70224.1| Ribosomal protein S11 [Homo sapiens]
gi|60656399|gb|AAX32763.1| ribosomal protein S11 [synthetic construct]
gi|71682370|gb|AAI00026.1| RPS11 protein [Homo sapiens]
gi|74178039|dbj|BAE29812.1| unnamed protein product [Mus musculus]
gi|74268291|gb|AAI02250.1| Ribosomal protein S11 [Bos taurus]
gi|90085401|dbj|BAE91441.1| unnamed protein product [Macaca fascicularis]
gi|119572882|gb|EAW52497.1| ribosomal protein S11 [Homo sapiens]
gi|123993099|gb|ABM84151.1| ribosomal protein S11 [synthetic construct]
gi|124000091|gb|ABM87554.1| ribosomal protein S11 [synthetic construct]
gi|148690854|gb|EDL22801.1| mCG23457 [Mus musculus]
gi|149055979|gb|EDM07410.1| rCG54396, isoform CRA_a [Rattus norvegicus]
gi|189053130|dbj|BAG34752.1| unnamed protein product [Homo sapiens]
gi|289583681|gb|ADD10745.1| ribosomal protein S11 [Ailuropoda melanoleuca]
gi|296477510|tpg|DAA19625.1| TPA: 40S ribosomal protein S11 [Bos taurus]
gi|327239346|gb|AEA39540.1| ribosomal protein S11 [Ailuropoda melanoleuca]
gi|344247904|gb|EGW04008.1| 40S ribosomal protein S11 [Cricetulus griseus]
gi|387542702|gb|AFJ71978.1| 40S ribosomal protein S11 [Macaca mulatta]
Length = 158
Score = 184 bits (468), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 116/158 (73%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+ G R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>gi|342356385|gb|AEL28851.1| ribosomal protein S11 [Heliconius melpomene cythera]
Length = 152
Score = 184 bits (468), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 93/139 (66%), Positives = 107/139 (76%), Gaps = 11/139 (7%)
Query: 1 MAEQTEKAFLKQPG-----KGG-----NRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
MA+QTEKAF KQ KGG R K++GLGFKTPREAIEGTYIDKKCPFTG V
Sbjct: 1 MADQTEKAFQKQATVFLNRKGGLKKRDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNV 60
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
SIRGRIL G KM RTI++RR+YLH++ KY R+EKRH N+ H+SPCFR V++GD V
Sbjct: 61 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEQGDIV 120
Query: 110 IIGQCRPLSKTVRFNVLKV 128
IG+CRPLSKTVRFNVLKV
Sbjct: 121 TIGECRPLSKTVRFNVLKV 139
>gi|315115395|gb|ADT80670.1| ribosomal protein S11 isoform 2 [Euphydryas aurinia]
Length = 152
Score = 184 bits (468), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 93/139 (66%), Positives = 107/139 (76%), Gaps = 11/139 (7%)
Query: 1 MAEQTEKAFLKQPG-----KGG-----NRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
MA+QTEKAF KQ KGG R K++GLGFKTPREAIEGTYIDKKCPFTG V
Sbjct: 1 MADQTEKAFQKQATVFLNKKGGLKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNV 60
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
SIRGRIL G KM RTI++RR+YLH++ KY R+EKRH N+ H+SPCFR V++GD V
Sbjct: 61 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEQGDIV 120
Query: 110 IIGQCRPLSKTVRFNVLKV 128
IG+CRPLSKTVRFNVLKV
Sbjct: 121 TIGECRPLSKTVRFNVLKV 139
>gi|157128595|ref|XP_001655146.1| 40S ribosomal protein S11 [Aedes aegypti]
gi|11276031|gb|AAG33862.1|AF315552_1 ribosomal protein S11 [Aedes aegypti]
gi|23268289|gb|AAN11324.1| ribosomal protein S11 [Aedes aegypti]
gi|108882210|gb|EAT46435.1| AAEL002372-PB [Aedes aegypti]
Length = 152
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 93/153 (60%), Positives = 109/153 (71%), Gaps = 14/153 (9%)
Query: 1 MAEQTEKAFLKQPG----------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
MA+Q E+AF KQ G K G R SIGLGFKTP+EAI GTYIDKKCPFTG +
Sbjct: 1 MADQNERAFQKQNGVNLNRKQVNKKKGLRLHHSIGLGFKTPKEAIAGTYIDKKCPFTGHI 60
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
+IRGRIL G KM RTI++RR+YLHF++KY R+EKRH N+ H+SPCFR V+ GD V
Sbjct: 61 AIRGRILTGVVRKMKMQRTIVIRRDYLHFIRKYDRFEKRHRNLSVHLSPCFRDVEAGDIV 120
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
+G+CRPLSKTVRFNVLKV GAKK F
Sbjct: 121 TVGECRPLSKTVRFNVLKV---SKLAGAKKKFN 150
>gi|19114915|ref|NP_594003.1| 40S ribosomal protein S11 [Schizosaccharomyces pombe 972h-]
gi|19115584|ref|NP_594672.1| 40S ribosomal protein S11 [Schizosaccharomyces pombe 972h-]
gi|3334494|sp|P79013.2|RS11_SCHPO RecName: Full=40S ribosomal protein S11
gi|2388954|emb|CAB11687.1| 40S ribosomal protein S11 (predicted) [Schizosaccharomyces pombe]
gi|6138902|emb|CAB59691.1| 40S ribosomal protein S11 (predicted) [Schizosaccharomyces pombe]
Length = 152
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 89/136 (65%), Positives = 105/136 (77%), Gaps = 7/136 (5%)
Query: 1 MAEQTEKAFLKQP------GKG-GNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIR 53
+ Q+E+AF KQP KG G R++K +GLGFKTP EAI G Y+DKKCPF G VSIR
Sbjct: 5 LVVQSERAFQKQPHIFQNAKKGAGRRWYKDVGLGFKTPAEAIYGEYVDKKCPFVGQVSIR 64
Query: 54 GRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQ 113
GRIL GT S KM+RTII+RR YLHF+ KY RYEKRH N+ AH+SP FR+ EGD V +GQ
Sbjct: 65 GRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFRINEGDVVTVGQ 124
Query: 114 CRPLSKTVRFNVLKVI 129
CRPLSKTVRFNVL+V+
Sbjct: 125 CRPLSKTVRFNVLRVV 140
>gi|448515444|ref|XP_003867340.1| hypothetical protein CORT_0B01840 [Candida orthopsilosis Co 90-125]
gi|380351679|emb|CCG21902.1| hypothetical protein CORT_0B01840 [Candida orthopsilosis]
Length = 155
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 90/152 (59%), Positives = 111/152 (73%), Gaps = 13/152 (8%)
Query: 1 MAEQTEKAFLKQ----------PGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q+E+AF KQ + R++K +GLGFKTP AI+G+YIDKKCPF GTV
Sbjct: 5 LTVQSERAFQKQQHIFTNPKAKANRKAKRWYKDVGLGFKTPSAAIKGSYIDKKCPFVGTV 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRG+IL+GT S KM+RTII+RR+YLH+V KY RYEKRH N+ AH+SP FRV EGD V
Sbjct: 65 SIRGKILSGTVVSTKMHRTIIIRRDYLHYVPKYNRYEKRHKNVAAHVSPAFRVSEGDVVT 124
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
+GQCRP+SKTVRFNVLKV + S K+FT
Sbjct: 125 VGQCRPISKTVRFNVLKVTASVSKS---KSFT 153
>gi|126330004|ref|XP_001363138.1| PREDICTED: 40S ribosomal protein S11-like [Monodelphis domestica]
Length = 158
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 114/158 (72%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQPGKGGN---------------RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP N R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGDTAKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>gi|70909517|emb|CAJ17182.1| ribosomal protein S11e [Dascillus cervinus]
Length = 152
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 91/152 (59%), Positives = 113/152 (74%), Gaps = 14/152 (9%)
Query: 1 MAEQTEKAFLKQPG-----KGGN-----RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
MA+QTEK+F KQ K G+ R +S+GLGF+TPREA+EGTY+DKKCPFTG V
Sbjct: 1 MADQTEKSFQKQASVFQNRKAGSKKKSLRHHRSVGLGFETPREAMEGTYVDKKCPFTGNV 60
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
SIRGRIL G KM RTI++RR+YLH+++KY R++KRH N+ H+SPCFR V+ GD V
Sbjct: 61 SIRGRILTGVVQKMKMQRTIVIRRDYLHYIRKYNRFQKRHRNMSVHLSPCFRDVENGDVV 120
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IG+CRPLSKTVRFNVLKV G+KK+F
Sbjct: 121 TIGECRPLSKTVRFNVLKVT---KQTGSKKSF 149
>gi|124505009|ref|XP_001351246.1| 40S ribosomal protein S11, putative [Plasmodium falciparum 3D7]
gi|7768291|emb|CAB11137.2| 40S ribosomal protein S11, putative [Plasmodium falciparum 3D7]
Length = 161
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 93/152 (61%), Positives = 104/152 (68%), Gaps = 13/152 (8%)
Query: 4 QTEKAFLKQPGKGGN-------------RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
Q E+A+ KQ G R+WK +GLGF TP+EA EG Y+DKKCPFTG V
Sbjct: 8 QHERAYQKQEGASFFNSKKIKKGSKSYIRYWKKVGLGFATPKEAKEGVYVDKKCPFTGNV 67
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRGRIL G S KM RTII+RRNYLH+VKKY R+EKRH NIP H SPCF VKEGD V
Sbjct: 68 SIRGRILKGMVISNKMKRTIIIRRNYLHYVKKYNRFEKRHKNIPCHCSPCFDVKEGDIVT 127
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
+GQCRPLSKTVRFNVL V G A+K F
Sbjct: 128 VGQCRPLSKTVRFNVLHVEKHQIFGSARKQFV 159
>gi|149757872|ref|XP_001492034.1| PREDICTED: 40S ribosomal protein S11-like [Equus caballus]
Length = 158
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 114/158 (72%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQPGKGGN---------------RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP N R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETAKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>gi|50556514|ref|XP_505665.1| 40S ribosomal protein S11 [Yarrowia lipolytica]
gi|49651535|emb|CAG78474.1| YALI0F20482p [Yarrowia lipolytica CLIB122]
Length = 155
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 89/149 (59%), Positives = 108/149 (72%), Gaps = 12/149 (8%)
Query: 4 QTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIR 53
Q E+AF KQP + R++K +GLGFKTP AI G YIDKKCPF G +SIR
Sbjct: 7 QNERAFQKQPHIFQNAKSKVNRKTKRWYKEVGLGFKTPSAAITGDYIDKKCPFVGDISIR 66
Query: 54 GRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQ 113
G+IL G S KM+RTII+RR YLH++ KY RYEKRH N+ AH+SP FRV+ GD V +GQ
Sbjct: 67 GKILTGKVVSTKMHRTIIIRREYLHYIPKYNRYEKRHKNLAAHVSPAFRVENGDMVTVGQ 126
Query: 114 CRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
CRPLSKTVRFNVL+V+PA +G A KAF+
Sbjct: 127 CRPLSKTVRFNVLRVLPA--TGKANKAFS 153
>gi|281212402|gb|EFA86562.1| 40S ribosomal protein S11 [Polysphondylium pallidum PN500]
Length = 155
Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 91/155 (58%), Positives = 112/155 (72%), Gaps = 14/155 (9%)
Query: 1 MAE-QTEKAFLKQ-------------PGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MA+ Q EKAF KQ GK G R++KSIGLG++ P++AI+GTY+DKKCPF
Sbjct: 1 MADVQAEKAFQKQLCVFTRSVQSKTIKGKEGIRYYKSIGLGYRVPKDAIDGTYVDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
T VSIRG IL G S KM RTII+RR+YLH++KKY R+EKRHSNI AH SP F +K+G
Sbjct: 61 TSNVSIRGTILKGVVVSTKMRRTIIMRRDYLHYIKKYNRFEKRHSNISAHASPAFNIKDG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
D V IGQCRPL+KTV+FNV+K P+ +S KAF
Sbjct: 121 DSVTIGQCRPLAKTVKFNVIKHDPSAASKKQFKAF 155
>gi|348509119|ref|XP_003442099.1| PREDICTED: 40S ribosomal protein S11-like [Oreochromis niloticus]
Length = 161
Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 96/161 (59%), Positives = 114/161 (70%), Gaps = 23/161 (14%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN-------RFWKSIGLGFKTPREAIEGTYID 41
MA+ QTE+++ KQP GG R+ KS+GLGFKTPREAIEGTYID
Sbjct: 1 MADAQTERSYQKQPTIFQNKKRVLIADGGKETKEKLPRYHKSVGLGFKTPREAIEGTYID 60
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
KKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCF
Sbjct: 61 KKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNLSVHLSPCF 120
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
R V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 121 RDVTVGDIVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 158
>gi|225705864|gb|ACO08778.1| 40S ribosomal protein S11 [Oncorhynchus mykiss]
Length = 161
Score = 184 bits (467), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 96/161 (59%), Positives = 115/161 (71%), Gaps = 23/161 (14%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN-------RFWKSIGLGFKTPREAIEGTYID 41
MA+ QTE+A+ KQP G+GG R+ KS+GLGFKTPREAI+GTYID
Sbjct: 1 MADAQTERAYQKQPTIFQNKKRVLVGEGGKEAKEKLPRYHKSVGLGFKTPREAIDGTYID 60
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
KKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SP F
Sbjct: 61 KKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNVSVHLSPAF 120
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
R V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 121 RDVSVGDIVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 158
>gi|307187585|gb|EFN72597.1| 40S ribosomal protein S11 [Camponotus floridanus]
gi|307200299|gb|EFN80564.1| 40S ribosomal protein S11 [Harpegnathos saltator]
gi|332026047|gb|EGI66198.1| 40S ribosomal protein S11 [Acromyrmex echinatior]
gi|332026048|gb|EGI66199.1| 40S ribosomal protein S11 [Acromyrmex echinatior]
Length = 155
Score = 184 bits (467), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 92/155 (59%), Positives = 113/155 (72%), Gaps = 17/155 (10%)
Query: 1 MAEQTEKAFLKQPGKGGNR-------------FWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MA+Q+E+AF KQP NR + +++GLGFKTPREA+EGTYIDKKCPFT
Sbjct: 1 MADQSERAFQKQPTIFLNRKKGLGPKRRKPMRYSRNVGLGFKTPREALEGTYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
G VSIRGRIL G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ G
Sbjct: 61 GNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYIRKYNRFEKRHRNMSVHLSPCFRDVEIG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
D V IG+CRPLSKTVRFNVLKV G+KK+F
Sbjct: 121 DVVTIGECRPLSKTVRFNVLKV---SKGTGSKKSF 152
>gi|225719216|gb|ACO15454.1| 40S ribosomal protein S11 [Caligus clemensi]
Length = 167
Score = 184 bits (467), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 96/161 (59%), Positives = 115/161 (71%), Gaps = 23/161 (14%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN-------RFWKSIGLGFKTPREAIEGTYID 41
MA+ QTE+A+ KQP G+GG R+ KS+GLGFKTPREAI+GTYID
Sbjct: 7 MADAQTERAYQKQPTIFQNKKRVLVGEGGKEAKEKLPRYHKSVGLGFKTPREAIDGTYID 66
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
KKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SP F
Sbjct: 67 KKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPAF 126
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
R V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 127 RDVSVGDIVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 164
>gi|10764827|gb|AAG22825.1|AF304162_1 40S ribosomal protein S11 [Sander vitreus]
Length = 157
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/157 (60%), Positives = 111/157 (70%), Gaps = 22/157 (14%)
Query: 4 QTEKAFLKQP-----------GKGGN-------RFWKSIGLGFKTPREAIEGTYIDKKCP 45
QTE+A+ KQP GG R+ KS+GLGFKTPREAI+GTYIDKKCP
Sbjct: 1 QTERAYQKQPTIFQNKKRVLVADGGKEVKEKLPRYHKSVGLGFKTPREAIDGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VK 104
FTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH NI H+SPCFR V
Sbjct: 61 FTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNISVHLSPCFRDVT 120
Query: 105 EGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 121 VGDIVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 154
>gi|380025060|ref|XP_003696299.1| PREDICTED: 40S ribosomal protein S11-like [Apis florea]
Length = 162
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/155 (58%), Positives = 111/155 (71%), Gaps = 14/155 (9%)
Query: 1 MAEQTEKAFLKQPGKGGNR-------------FWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MA+Q+E+AF KQP NR + +++GLGFKTPREA+EGTYIDKKCPFT
Sbjct: 1 MADQSERAFQKQPTIFLNRKKGLGPKRRKPMRYSRNVGLGFKTPREALEGTYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
G +SIRGRIL G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ G
Sbjct: 61 GNISIRGRILTGVVQKMKMQRTIVIRRDYLHYIRKYNRFEKRHRNMSVHLSPCFRDVEIG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
D V IG+CRPLSKTVRFNVLKV S + K F
Sbjct: 121 DVVTIGECRPLSKTVRFNVLKVSKGTGSKKSSKNF 155
>gi|149287144|gb|ABR23471.1| 40S ribosomal protein S11 [Ornithodoros parkeri]
Length = 156
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/159 (60%), Positives = 111/159 (69%), Gaps = 18/159 (11%)
Query: 1 MAEQTEKAFLKQPG-----KGG---------NRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MAEQ E+AF KQP K G R++K++GLGFKTPREAI GTYIDKKCPF
Sbjct: 1 MAEQNERAFQKQPTVFLNRKAGLPKGNPLRFQRYYKNVGLGFKTPREAIHGTYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKE 105
T VSIRGRIL G KM RTI++RR+YLHFV+KY R+EKRH N+ H+SP FR V
Sbjct: 61 TSDVSIRGRILRGVVIKMKMQRTIVIRRDYLHFVRKYNRFEKRHRNMSVHLSPAFRDVAL 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GD V +G+CRPLSKTVRFNVLKV A G+KK F M
Sbjct: 121 GDVVTVGECRPLSKTVRFNVLKVTKA---AGSKKQFQKM 156
>gi|114153064|gb|ABI52698.1| 40S ribosomal protein S11 [Argas monolakensis]
Length = 156
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/159 (59%), Positives = 112/159 (70%), Gaps = 18/159 (11%)
Query: 1 MAEQTEKAFLKQPG---------KGGN-----RFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MAEQ E+AF KQP GN R++K++GLGFKTPREAI GTYIDKKCPF
Sbjct: 1 MAEQNERAFQKQPTVFLNRKAGLPKGNPKRLVRYYKNVGLGFKTPREAIHGTYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKE 105
TG VSIRGRIL G KM RTI++RR+YLH+V+KY R+EKRH N+ H+SP FR V
Sbjct: 61 TGNVSIRGRILRGVVIKMKMQRTIVIRRDYLHYVRKYNRFEKRHRNMSVHLSPAFRDVAP 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GD V +G+CRPLSKTVRFNVLKV + G+KK F M
Sbjct: 121 GDVVTVGECRPLSKTVRFNVLKVT---KTAGSKKQFQKM 156
>gi|328858810|gb|EGG07921.1| hypothetical protein MELLADRAFT_35136 [Melampsora larici-populina
98AG31]
Length = 162
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/141 (68%), Positives = 103/141 (73%), Gaps = 14/141 (9%)
Query: 2 AEQTEKAFLKQP----------GK---GGNRFW-KSIGLGFKTPREAIEGTYIDKKCPFT 47
AEQTEKAF KQP GK G R W K++GLGFKTP EAI GTYIDKKCPFT
Sbjct: 7 AEQTEKAFQKQPIFQNSKIKSTGKKTAGKERRWYKNVGLGFKTPTEAINGTYIDKKCPFT 66
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
G VSIRGRIL G S KM RTII+RR YLHFV KY RYEKRH N+ H SP FRV+ GD
Sbjct: 67 GEVSIRGRILTGRVVSTKMTRTIIIRREYLHFVPKYSRYEKRHQNMAVHCSPAFRVEIGD 126
Query: 108 HVIIGQCRPLSKTVRFNVLKV 128
V +GQCRPLSKTVRFNVL+V
Sbjct: 127 QVTVGQCRPLSKTVRFNVLRV 147
>gi|124300807|dbj|BAF45899.1| ribosomal protein S11 [Solea senegalensis]
Length = 161
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/161 (59%), Positives = 114/161 (70%), Gaps = 23/161 (14%)
Query: 1 MAE-QTEKAFLKQPG-----------KGGN-------RFWKSIGLGFKTPREAIEGTYID 41
MA+ QTE+A+ KQP GG R+ KS+GLGFKTPREAI+GTYID
Sbjct: 1 MADAQTERAYQKQPTIFQNKKRVLATDGGKEAKEKLPRYHKSVGLGFKTPREAIDGTYID 60
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
KKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCF
Sbjct: 61 KKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNLSVHLSPCF 120
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
R V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 121 RDVSVGDIVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 158
>gi|432868002|ref|XP_004071363.1| PREDICTED: 40S ribosomal protein S11-like isoform 1 [Oryzias
latipes]
Length = 161
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/161 (59%), Positives = 115/161 (71%), Gaps = 23/161 (14%)
Query: 1 MAE-QTEKAFLKQP--------------GKGGN----RFWKSIGLGFKTPREAIEGTYID 41
MA+ QTE+++ KQP GK G R+ KS+GLGFKTPR+AIEGTYID
Sbjct: 1 MADAQTERSYQKQPTIFQNKKRVLLTDGGKEGKEKLPRYHKSVGLGFKTPRDAIEGTYID 60
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
KKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCF
Sbjct: 61 KKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNLSVHLSPCF 120
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
R V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 121 RDVTVGDIVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 158
>gi|156542267|ref|XP_001599669.1| PREDICTED: 40S ribosomal protein S11-like [Nasonia vitripennis]
Length = 154
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/154 (60%), Positives = 111/154 (72%), Gaps = 16/154 (10%)
Query: 1 MAEQTEKAFLKQPGKGGNR------------FWKSIGLGFKTPREAIEGTYIDKKCPFTG 48
MA+Q K+F KQP NR + +++GLGFKTPREAIEGTYIDKKCPFTG
Sbjct: 1 MADQNVKSFQKQPTIFLNRKKGLTKHRKSLRYSRNVGLGFKTPREAIEGTYIDKKCPFTG 60
Query: 49 TVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGD 107
VSIRGRIL G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD
Sbjct: 61 NVSIRGRILTGVVQKLKMQRTIVIRRDYLHYIRKYNRFEKRHRNMSVHLSPCFRDVEIGD 120
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 121 VVTIGECRPLSKTVRFNVLKV---SKGTGAKKSF 151
>gi|332373732|gb|AEE62007.1| unknown [Dendroctonus ponderosae]
Length = 152
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/139 (64%), Positives = 105/139 (75%), Gaps = 11/139 (7%)
Query: 1 MAEQTEKAFLKQPGKGGN----------RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
MA+QTE+AF KQP N R +++GLGFKTPREAIEG YIDKKCPFTG V
Sbjct: 1 MADQTERAFQKQPTVFSNPKLQSKKKVVRLSRNVGLGFKTPREAIEGHYIDKKCPFTGNV 60
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
SIRGRIL G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD V
Sbjct: 61 SIRGRILTGVVQKMKMQRTIVIRRDYLHYIRKYNRFEKRHRNMSVHLSPCFRDVEIGDVV 120
Query: 110 IIGQCRPLSKTVRFNVLKV 128
IG+CRPLSKTVRFNVLKV
Sbjct: 121 TIGECRPLSKTVRFNVLKV 139
>gi|110756499|ref|XP_001119947.1| PREDICTED: 40S ribosomal protein S11 [Apis mellifera]
gi|340714378|ref|XP_003395706.1| PREDICTED: 40S ribosomal protein S11-like [Bombus terrestris]
gi|350417385|ref|XP_003491397.1| PREDICTED: 40S ribosomal protein S11-like [Bombus impatiens]
Length = 155
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/155 (58%), Positives = 113/155 (72%), Gaps = 17/155 (10%)
Query: 1 MAEQTEKAFLKQPGKGGNR-------------FWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MA+Q+E+AF KQP NR + +++GLGFKTPREA+EGTYIDKKCPFT
Sbjct: 1 MADQSERAFQKQPTIFLNRKKGLGPKRRKPMRYSRNVGLGFKTPREALEGTYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
G +SIRGRIL G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ G
Sbjct: 61 GNISIRGRILTGVVQKMKMQRTIVIRRDYLHYIRKYNRFEKRHRNMSVHLSPCFRDVEIG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
D V IG+CRPLSKTVRFNVLKV G+KK+F
Sbjct: 121 DVVTIGECRPLSKTVRFNVLKV---SKGTGSKKSF 152
>gi|185133096|ref|NP_001117010.1| 40S ribosomal protein S11 [Salmo salar]
gi|10764825|gb|AAG22824.1|AF304161_1 40S ribosomal protein S11 [Salmo salar]
gi|209731728|gb|ACI66733.1| 40S ribosomal protein S11 [Salmo salar]
gi|209737210|gb|ACI69474.1| 40S ribosomal protein S11 [Salmo salar]
gi|223646192|gb|ACN09854.1| 40S ribosomal protein S11 [Salmo salar]
gi|223646330|gb|ACN09923.1| 40S ribosomal protein S11 [Salmo salar]
gi|223672039|gb|ACN12201.1| 40S ribosomal protein S11 [Salmo salar]
gi|223672177|gb|ACN12270.1| 40S ribosomal protein S11 [Salmo salar]
Length = 161
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/161 (59%), Positives = 115/161 (71%), Gaps = 23/161 (14%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN-------RFWKSIGLGFKTPREAIEGTYID 41
MA+ QTE+A+ KQP G+GG R+ KS+GLGFKTPREAI+GTYID
Sbjct: 1 MADAQTERAYQKQPTIFQNKKRVLVGEGGKEAKEKLPRYHKSVGLGFKTPREAIDGTYID 60
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
KKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SP F
Sbjct: 61 KKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPAF 120
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
R V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 121 RDVSVGDIVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 158
>gi|225704274|gb|ACO07983.1| 40S ribosomal protein S11 [Oncorhynchus mykiss]
Length = 161
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/161 (59%), Positives = 115/161 (71%), Gaps = 23/161 (14%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN-------RFWKSIGLGFKTPREAIEGTYID 41
MA+ QTE+A+ KQP G+GG R+ KS+GLGFKTPREAI+GTYID
Sbjct: 1 MADAQTERAYQKQPTIFQNKKRVLVGEGGKEAKEKLPRYHKSVGLGFKTPREAIDGTYID 60
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
KKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SP F
Sbjct: 61 KKCPFTGDVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPAF 120
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
R V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 121 RDVSVGDIVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 158
>gi|350536901|ref|NP_001233253.1| 40S ribosomal protein S11 [Oncorhynchus mykiss]
gi|225703812|gb|ACO07752.1| 40S ribosomal protein S11 [Oncorhynchus mykiss]
Length = 161
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/161 (59%), Positives = 115/161 (71%), Gaps = 23/161 (14%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN-------RFWKSIGLGFKTPREAIEGTYID 41
MA+ QTE+A+ KQP G+GG R+ KS+GLGFKTPREAI+GTYID
Sbjct: 1 MADAQTERAYQKQPTIFQNKKRVLVGEGGKEAEEKLPRYHKSVGLGFKTPREAIDGTYID 60
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
KKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SP F
Sbjct: 61 KKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPAF 120
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
R V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 121 RDVSVGDIVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 158
>gi|393247844|gb|EJD55351.1| hypothetical protein AURDEDRAFT_109709 [Auricularia delicata
TFB-10046 SS5]
Length = 153
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/153 (61%), Positives = 108/153 (70%), Gaps = 15/153 (9%)
Query: 1 MAEQTEKAFLKQ------PGKGGN------RFWKSIGLGFKTPREAIEGTYIDKKCPFTG 48
MAEQ EKA+ KQ + G R++K +GLGFKTP EAI GTYIDKKCPFTG
Sbjct: 1 MAEQIEKAYQKQHLFQNAKARAGKKVTKEKRWYKDVGLGFKTPGEAITGTYIDKKCPFTG 60
Query: 49 TVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDH 108
+VSIRGRIL G S KM RTII+RR+YLH++ KY RYEKRH N+ AH+SP FRV GD
Sbjct: 61 SVSIRGRILTGKVVSTKMTRTIIIRRDYLHYIPKYNRYEKRHKNLAAHVSPAFRVDVGDI 120
Query: 109 VIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V +GQCRPLSKTVRFNVL+V S A K F
Sbjct: 121 VTVGQCRPLSKTVRFNVLRV---SKSKAASKTF 150
>gi|29825599|gb|AAO92287.1| 40S ribosomal protein S11 [Dermacentor variabilis]
Length = 156
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 111/156 (71%), Gaps = 18/156 (11%)
Query: 1 MAEQTEKAFLKQPG-----KGG---------NRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MAEQ E++F KQP K G R++KS+GLGFKTPREAI GTYIDKKCPF
Sbjct: 1 MAEQVERSFQKQPTVFLNRKAGLPKGNPKRVQRYYKSVGLGFKTPREAIHGTYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKE 105
TG VSIRGRIL G KM RTI++RR+YLH+V+KY R+EKRH N+ H+SP FR V
Sbjct: 61 TGNVSIRGRILRGVVVKMKMQRTIVIRRDYLHYVRKYNRFEKRHRNMSVHLSPAFRDVAV 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V +G+CRPLSKTVRFNVLKV A G+KK F
Sbjct: 121 GDVVTVGECRPLSKTVRFNVLKVTKA---AGSKKQF 153
>gi|68067397|ref|XP_675667.1| 40S ribosomal protein S11 [Plasmodium berghei strain ANKA]
gi|82752681|ref|XP_727394.1| ribosomal protein S17 [Plasmodium yoelii yoelii 17XNL]
gi|23483217|gb|EAA18959.1| ribosomal protein S17, putative [Plasmodium yoelii yoelii]
gi|56494984|emb|CAH97566.1| 40S ribosomal protein S11, putative [Plasmodium berghei]
Length = 161
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/152 (59%), Positives = 104/152 (68%), Gaps = 13/152 (8%)
Query: 4 QTEKAFLKQPGKG-------------GNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
Q E+A+ KQ G R+WK++G+GF P+EA EG Y+DKKCPFTG V
Sbjct: 8 QHERAYQKQEGASFFNSKKLKKGSKSYTRYWKNVGMGFAVPKEAKEGVYVDKKCPFTGNV 67
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRGRIL G S KM RTII+RRNYLH+VKKY R+EKRH NIP H SPCF VKEGD V
Sbjct: 68 SIRGRILKGMVISNKMKRTIIIRRNYLHYVKKYNRFEKRHKNIPCHCSPCFDVKEGDIVT 127
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
+GQCRPLSKTVRFNVL V G A+K F
Sbjct: 128 VGQCRPLSKTVRFNVLHVEKHQIFGSARKQFV 159
>gi|392597420|gb|EIW86742.1| hypothetical protein CONPUDRAFT_115377 [Coniophora puteana
RWD-64-598 SS2]
Length = 154
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/141 (63%), Positives = 105/141 (74%), Gaps = 13/141 (9%)
Query: 1 MAEQTEKAFLKQ---------PGKG----GNRFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MA+Q EKAF KQ GK R++K +GLGFKTP EAI+GTYIDKKCPFT
Sbjct: 1 MADQVEKAFQKQHLFQNAKVRDGKKISTKDKRWYKDVGLGFKTPSEAIQGTYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
G VSIRGRIL G S KM RTII+RR+YLH++ KY RYEKRH N+ AH+SP FRV+ GD
Sbjct: 61 GAVSIRGRILTGKVVSTKMTRTIIIRRDYLHYIPKYNRYEKRHKNLAAHVSPAFRVEVGD 120
Query: 108 HVIIGQCRPLSKTVRFNVLKV 128
V +GQCRPLSKTVRFNV++V
Sbjct: 121 VVTVGQCRPLSKTVRFNVVRV 141
>gi|47218798|emb|CAG02783.1| unnamed protein product [Tetraodon nigroviridis]
Length = 161
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/161 (59%), Positives = 114/161 (70%), Gaps = 23/161 (14%)
Query: 1 MAE-QTEKAFLKQPG-----------KGGN-------RFWKSIGLGFKTPREAIEGTYID 41
MA+ QTE+++ KQP GG R+ KS+GLGFKTPREAIEGTYID
Sbjct: 1 MADAQTERSYQKQPTIFQNKKRVLATDGGKETKEKLPRYHKSVGLGFKTPREAIEGTYID 60
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
KKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCF
Sbjct: 61 KKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCF 120
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
R V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 121 RDVTVGDIVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 158
>gi|91085601|ref|XP_966424.1| PREDICTED: similar to ribosomal protein S11-2 isoform 1 [Tribolium
castaneum]
Length = 152
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/139 (63%), Positives = 106/139 (76%), Gaps = 11/139 (7%)
Query: 1 MAEQTEKAFLKQPGKGGNR----------FWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
MA+QTE+AF +Q G NR +++GLGFKTPREAIEG+YIDKKCPFTG V
Sbjct: 1 MADQTERAFQRQHGINVNRKAGLKKKVLRLSRNVGLGFKTPREAIEGSYIDKKCPFTGNV 60
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
SIRGRIL G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD V
Sbjct: 61 SIRGRILTGVVQKMKMQRTIVIRRDYLHYIRKYNRFEKRHRNMSVHLSPCFRDVEIGDVV 120
Query: 110 IIGQCRPLSKTVRFNVLKV 128
IG+CRPLSKTVRFNVLKV
Sbjct: 121 TIGECRPLSKTVRFNVLKV 139
>gi|213402015|ref|XP_002171780.1| 40S ribosomal protein S11 [Schizosaccharomyces japonicus yFS275]
gi|211999827|gb|EEB05487.1| 40S ribosomal protein S11 [Schizosaccharomyces japonicus yFS275]
Length = 153
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/137 (63%), Positives = 103/137 (75%), Gaps = 8/137 (5%)
Query: 1 MAEQTEKAFLKQP--------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSI 52
+ Q+E+AF KQP G R++K +GLGFKTP EAI G YIDKKCPF G VSI
Sbjct: 5 LVVQSERAFQKQPHIFQNAKKTVGRRRWYKDVGLGFKTPAEAIRGEYIDKKCPFVGQVSI 64
Query: 53 RGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
RGRIL GT S KM+RT+++RR YLHF+ KY RYEKRH N+ AH+SP FRV EGD V +G
Sbjct: 65 RGRILTGTVVSTKMHRTVVIRREYLHFIPKYNRYEKRHKNLSAHLSPAFRVNEGDVVTVG 124
Query: 113 QCRPLSKTVRFNVLKVI 129
QCRPLSKTVRFNVL+V+
Sbjct: 125 QCRPLSKTVRFNVLRVV 141
>gi|52346138|ref|NP_001005113.1| ribosomal protein S11 [Xenopus (Silurana) tropicalis]
gi|50370306|gb|AAH77050.1| MGC89973 protein [Xenopus (Silurana) tropicalis]
gi|89269536|emb|CAJ82415.1| ribosomal protein S11 [Xenopus (Silurana) tropicalis]
Length = 158
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 116/158 (73%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+ G R+++++GLGFKTPREAI+GTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLQGETGKEKLPRYYRNVGLGFKTPREAIDGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>gi|425769584|gb|EKV08075.1| 40S ribosomal protein S11 [Penicillium digitatum Pd1]
gi|425771164|gb|EKV09616.1| 40S ribosomal protein S11 [Penicillium digitatum PHI26]
Length = 158
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/140 (60%), Positives = 104/140 (74%), Gaps = 12/140 (8%)
Query: 1 MAEQTEKAFLKQP------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTG 48
+ Q+E+AF KQP G R++K +GLGF+TP+ AIEGTYIDKKCPFT
Sbjct: 5 LTVQSERAFQKQPHIFLNTKASSKKTAQGRRWYKDVGLGFRTPKTAIEGTYIDKKCPFTS 64
Query: 49 TVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDH 108
VSIRGR+L G S KM+RT+++RR YLH+V KY RYE+RH N+ AH+SP FRV+EGD
Sbjct: 65 QVSIRGRVLVGKVVSTKMHRTLVIRREYLHYVPKYNRYERRHKNLSAHVSPAFRVEEGDL 124
Query: 109 VIIGQCRPLSKTVRFNVLKV 128
V +GQCRPLSKTVRFNVLKV
Sbjct: 125 VTVGQCRPLSKTVRFNVLKV 144
>gi|403217051|emb|CCK71546.1| hypothetical protein KNAG_0H01330 [Kazachstania naganishii CBS
8797]
Length = 157
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/149 (59%), Positives = 108/149 (72%), Gaps = 10/149 (6%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q+E+AF KQP + R++K+ GLG+KTP+ AIEG+YIDKKCPF G +
Sbjct: 5 LTVQSERAFQKQPHIFTNPKVKTNRRTKRWYKNAGLGYKTPKTAIEGSYIDKKCPFVGDI 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRG+IL GT S KM+RTII+RRNYLH+V KY RYEKRH N+P H+SP FRV+ GD V
Sbjct: 65 SIRGKILTGTVVSTKMHRTIIIRRNYLHYVPKYNRYEKRHKNVPVHVSPAFRVQIGDIVT 124
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKK 139
GQCRP+SKTVRFNVLKV PA K+
Sbjct: 125 AGQCRPISKTVRFNVLKVSPALGKAANKQ 153
>gi|325530310|sp|Q9XSU4.2|RS11_CANFA RecName: Full=40S ribosomal protein S11
Length = 158
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 115/158 (72%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+ G R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 HIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>gi|341881717|gb|EGT37652.1| hypothetical protein CAEBREN_18508 [Caenorhabditis brenneri]
Length = 155
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/156 (59%), Positives = 110/156 (70%), Gaps = 17/156 (10%)
Query: 1 MAEQTEKAFLKQPGKGGN-------------RFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
M+EQTE+AFLKQP N R+ + +GLGFK PREA+EGTYIDKKCP+
Sbjct: 1 MSEQTERAFLKQPTVNLNNKARILANSKKTPRYIREVGLGFKAPREAVEGTYIDKKCPWA 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
G V IRG IL G KM RTI+VRR+YLH++KKY+RYEKRH N+PAH SP FR + G
Sbjct: 61 GNVPIRGMILTGVVLKNKMTRTIVVRRDYLHYIKKYRRYEKRHKNVPAHCSPAFRDIHPG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
D V IG+CRPLSKTVRFNVLKV SG +KK F+
Sbjct: 121 DLVTIGECRPLSKTVRFNVLKV---NKSGTSKKGFS 153
>gi|291222835|ref|XP_002731417.1| PREDICTED: ribosomal protein S11-like isoform 1 [Saccoglossus
kowalevskii]
Length = 157
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/155 (63%), Positives = 111/155 (71%), Gaps = 15/155 (9%)
Query: 1 MAEQTEKAFLKQP------------GKGGN-RFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MA+QTE+AF KQP GK N R ++IGLGFKTPREA +GTYIDKKCPFT
Sbjct: 1 MADQTERAFQKQPTVFQNKKRVLGSGKKKNLRLVRNIGLGFKTPREASQGTYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
G V IRGRIL G KM RTI+VRR+YLH++KKY R+EKRH NI H+SPCFR + G
Sbjct: 61 GNVHIRGRILNGVVTKMKMQRTIVVRRDYLHYIKKYNRFEKRHKNISVHLSPCFRDLTVG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
D V IG+CRPLSKTVRFNVLKV A S KKAF
Sbjct: 121 DVVTIGECRPLSKTVRFNVLKVSKAPGS-MKKKAF 154
>gi|321442921|gb|EFX59933.1| hypothetical protein DAPPUDRAFT_346316 [Daphnia pulex]
Length = 165
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/135 (62%), Positives = 100/135 (74%)
Query: 7 KAFLKQPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKM 66
K L + G R++K +GL F+TP+EAIE YIDKKCPFT V+IRG+IL G S KM
Sbjct: 28 KKLLAKKTSSGVRYYKQVGLNFRTPKEAIESNYIDKKCPFTSGVTIRGKILKGIVISTKM 87
Query: 67 NRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVL 126
RTI+VRR+YLH+V KY RYEKRH NIPAH+SP F VKEGD V+IG+CRPL+KTV FNVL
Sbjct: 88 QRTIVVRRDYLHYVPKYNRYEKRHRNIPAHVSPAFSVKEGDIVLIGECRPLTKTVHFNVL 147
Query: 127 KVIPAGSSGGAKKAF 141
KV P G +K F
Sbjct: 148 KVTPHEVVGNVRKQF 162
>gi|410902865|ref|XP_003964914.1| PREDICTED: 40S ribosomal protein S11-like [Takifugu rubripes]
Length = 198
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/161 (59%), Positives = 114/161 (70%), Gaps = 23/161 (14%)
Query: 1 MAE-QTEKAFLKQPG-----------KGGN-------RFWKSIGLGFKTPREAIEGTYID 41
MA+ QTE+++ KQP GG R+ KS+GLGFKTPREAIEGTYID
Sbjct: 38 MADAQTERSYQKQPTIFQNKKRVLATDGGKEAKEKLPRYHKSVGLGFKTPREAIEGTYID 97
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
KKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCF
Sbjct: 98 KKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCF 157
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
R V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 158 RDVTVGDIVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 195
>gi|121512014|gb|ABM55458.1| ribosomal protein S11-2 [Xenopsylla cheopis]
Length = 152
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/152 (60%), Positives = 111/152 (73%), Gaps = 14/152 (9%)
Query: 1 MAEQTEKAFLKQPGKGGNR----------FWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
MA+QTE+AF KQ G NR +++GLGFKTPREAIEGTY+DKKCPFTG V
Sbjct: 1 MADQTERAFQKQFGVNLNRKSGLKKKSLRRHRNVGLGFKTPREAIEGTYVDKKCPFTGNV 60
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
IRGRIL G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD V
Sbjct: 61 LIRGRILTGVVQKMKMQRTIVIRRDYLHYIRKYNRFEKRHRNMSVHLSPCFRDVEIGDVV 120
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IG+CRPLSKTVRFNVLKV G+KK+F
Sbjct: 121 TIGECRPLSKTVRFNVLKVTKG---QGSKKSF 149
>gi|268536472|ref|XP_002633371.1| C. briggsae CBR-RPS-11 protein [Caenorhabditis briggsae]
Length = 155
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/156 (59%), Positives = 110/156 (70%), Gaps = 17/156 (10%)
Query: 1 MAEQTEKAFLKQPGKGGN-------------RFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
M+EQTE+AFLKQP N R+ + +GLGFK PREA+EGTYIDKKCP+
Sbjct: 1 MSEQTERAFLKQPTVNLNNKARILAGSKKTPRYIREVGLGFKAPREAVEGTYIDKKCPWA 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
G V IRG IL G KM RTI+VRR+YLH++KKY+RYEKRH N+PAH SP FR + G
Sbjct: 61 GNVPIRGMILTGVVLKNKMTRTIVVRRDYLHYIKKYRRYEKRHKNVPAHCSPAFRDIHPG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
D V IG+CRPLSKTVRFNVLKV SG +KK F+
Sbjct: 121 DLVTIGECRPLSKTVRFNVLKV---NKSGTSKKGFS 153
>gi|291222837|ref|XP_002731418.1| PREDICTED: ribosomal protein S11-like isoform 2 [Saccoglossus
kowalevskii]
Length = 174
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/154 (63%), Positives = 110/154 (71%), Gaps = 15/154 (9%)
Query: 2 AEQTEKAFLKQP------------GKGGN-RFWKSIGLGFKTPREAIEGTYIDKKCPFTG 48
AEQTE+AF KQP GK N R ++IGLGFKTPREA +GTYIDKKCPFTG
Sbjct: 19 AEQTERAFQKQPTVFQNKKRVLGSGKKKNLRLVRNIGLGFKTPREASQGTYIDKKCPFTG 78
Query: 49 TVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGD 107
V IRGRIL G KM RTI+VRR+YLH++KKY R+EKRH NI H+SPCFR + GD
Sbjct: 79 NVHIRGRILNGVVTKMKMQRTIVVRRDYLHYIKKYNRFEKRHKNISVHLSPCFRDLTVGD 138
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V IG+CRPLSKTVRFNVLKV A S KKAF
Sbjct: 139 VVTIGECRPLSKTVRFNVLKVSKAPGS-MKKKAF 171
>gi|444705748|gb|ELW47139.1| Aldehyde dehydrogenase family 16 member A1 [Tupaia chinensis]
Length = 1274
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 92/153 (60%), Positives = 112/153 (73%), Gaps = 19/153 (12%)
Query: 5 TEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKCPFTGT 49
TE+A+ KQP G+ G R++K+IGLGFKTP+EAIEGTYIDKKCPFTG
Sbjct: 1122 TERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGN 1181
Query: 50 VSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDH 108
VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD
Sbjct: 1182 VSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDI 1241
Query: 109 VIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 1242 VTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 1271
>gi|308452606|ref|XP_003089106.1| hypothetical protein CRE_27966 [Caenorhabditis remanei]
gi|308491508|ref|XP_003107945.1| hypothetical protein CRE_12804 [Caenorhabditis remanei]
gi|308243214|gb|EFO87166.1| hypothetical protein CRE_27966 [Caenorhabditis remanei]
gi|308249892|gb|EFO93844.1| hypothetical protein CRE_12804 [Caenorhabditis remanei]
Length = 155
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/156 (59%), Positives = 110/156 (70%), Gaps = 17/156 (10%)
Query: 1 MAEQTEKAFLKQPGKGGN-------------RFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
M+EQTE+AFLKQP N R+ + +GLGFK PREA+EGTYIDKKCP+
Sbjct: 1 MSEQTERAFLKQPTVNLNNKARILSGSKKTPRYIREVGLGFKAPREAVEGTYIDKKCPWA 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
G V IRG IL G KM RTI+VRR+YLH++KKY+RYEKRH N+PAH SP FR + G
Sbjct: 61 GNVPIRGMILTGVVLKNKMTRTIVVRRDYLHYIKKYRRYEKRHKNVPAHCSPAFRDIHPG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
D V IG+CRPLSKTVRFNVLKV SG +KK F+
Sbjct: 121 DLVTIGECRPLSKTVRFNVLKV---NKSGTSKKGFS 153
>gi|114864890|gb|ABI83780.1| 40S ribosomal protein S11 [Anopheles funestus]
Length = 152
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/153 (60%), Positives = 111/153 (72%), Gaps = 14/153 (9%)
Query: 1 MAEQTEKAFLKQPG----------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
MA+Q +AF KQ G K G R +SIGLGFKTP+EAI GTYIDKKCPFTG +
Sbjct: 1 MADQNIRAFQKQLGINLNRKNVSKKKGLRMHRSIGLGFKTPKEAITGTYIDKKCPFTGHI 60
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
SIRGRIL G KM+RTI++RR+YLHF++KY R+EKRH N+ H+SPCFR V+ GD V
Sbjct: 61 SIRGRILTGVVRKMKMHRTIVIRRDYLHFIRKYDRFEKRHRNMSVHLSPCFRDVEAGDIV 120
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
+G+CRPLSKTVRFNVLKV G+KK F+
Sbjct: 121 TVGECRPLSKTVRFNVLKV---SKMAGSKKKFS 150
>gi|332261463|ref|XP_003279788.1| PREDICTED: 40S ribosomal protein S11-like isoform 1 [Nomascus
leucogenys]
gi|441644151|ref|XP_004090567.1| PREDICTED: 40S ribosomal protein S11-like isoform 2 [Nomascus
leucogenys]
gi|441644154|ref|XP_004090568.1| PREDICTED: 40S ribosomal protein S11-like isoform 3 [Nomascus
leucogenys]
gi|441644157|ref|XP_004090569.1| PREDICTED: 40S ribosomal protein S11-like isoform 4 [Nomascus
leucogenys]
Length = 158
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 115/158 (72%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+ G R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RT ++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTTVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>gi|428181066|gb|EKX49931.1| small subunit ribosomal protein S11e, cytoplasmic [Guillardia theta
CCMP2712]
Length = 164
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 81/132 (61%), Positives = 103/132 (78%)
Query: 4 QTEKAFLKQPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHS 63
Q +K FL + G+ RF KS+GLGFKTP EA +G YIDKKCP+ G VSIRG++L G S
Sbjct: 27 QNKKEFLGKAGRKAARFVKSVGLGFKTPLEAKDGVYIDKKCPWVGNVSIRGKLLRGVVVS 86
Query: 64 AKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRF 123
KM RTI++RR+Y+H++KKY RYEKRH N+PAH+SP F++ GD V++GQCRPLSKTVRF
Sbjct: 87 NKMKRTIVIRRDYMHYIKKYNRYEKRHKNVPAHVSPAFKLNPGDSVVVGQCRPLSKTVRF 146
Query: 124 NVLKVIPAGSSG 135
NVL+VI + G
Sbjct: 147 NVLQVITEAAGG 158
>gi|225710326|gb|ACO11009.1| 40S ribosomal protein S11 [Caligus rogercresseyi]
Length = 161
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/161 (59%), Positives = 115/161 (71%), Gaps = 23/161 (14%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN-------RFWKSIGLGFKTPREAIEGTYID 41
MA+ QTE+A+ KQP G+GG R+ KS+GLGFKTPREAI+GTYID
Sbjct: 1 MADAQTERAYQKQPTIFQNKKRVLVGEGGKEAKEKLPRYHKSVGLGFKTPREAIDGTYID 60
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
KKCPFTG VSIRGRIL+G KM RTI++RR+YLH++++Y R+EKRH N+ H+SP F
Sbjct: 61 KKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRRYNRFEKRHKNMSVHLSPAF 120
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
R V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 121 RDVSVGDIVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 158
>gi|14318169|gb|AAK59928.1|AF379640_1 ribosomal protein S11 [Heliothis virescens]
Length = 152
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/139 (66%), Positives = 106/139 (76%), Gaps = 11/139 (7%)
Query: 1 MAEQTEKAFLKQPG-----KGG-----NRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
MA+QTEKAF KQ KGG R K++GLGFKTPREAIEGTYIDKKCPFTG V
Sbjct: 1 MADQTEKAFQKQATVFLNKKGGLKRKDMRHSKNVGLGFKTPREAIEGTYIDKKCPFTGNV 60
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
SIRGRIL G KM RTI++RR+YLH++ KY R+EKRH N+ H+SPCFR V+ GD V
Sbjct: 61 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVELGDIV 120
Query: 110 IIGQCRPLSKTVRFNVLKV 128
IG+CRPLSKT+RFNVLKV
Sbjct: 121 TIGECRPLSKTIRFNVLKV 139
>gi|354547209|emb|CCE43943.1| hypothetical protein CPAR2_501680 [Candida parapsilosis]
Length = 155
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 86/138 (62%), Positives = 105/138 (76%), Gaps = 10/138 (7%)
Query: 1 MAEQTEKAFLKQ----------PGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q+E+AF KQ + R++K +GLGFKTP AI+G+YIDKKCPF GTV
Sbjct: 5 LTVQSERAFQKQQHIFTNPKAKANRKAKRWYKDVGLGFKTPSAAIKGSYIDKKCPFVGTV 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRG+IL+GT S KM+RTII+RR+YLH+V KY RYEKRH N+ AH+SP FRV EGD V
Sbjct: 65 SIRGKILSGTVVSTKMHRTIIIRRDYLHYVPKYNRYEKRHKNVAAHVSPAFRVAEGDVVT 124
Query: 111 IGQCRPLSKTVRFNVLKV 128
+GQCRP+SKTVRFNVLKV
Sbjct: 125 VGQCRPISKTVRFNVLKV 142
>gi|254577057|ref|XP_002494515.1| 40S ribosomal protein S11 [Zygosaccharomyces rouxii]
gi|238937404|emb|CAR25582.1| ZYRO0A03322p [Zygosaccharomyces rouxii]
Length = 155
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/152 (57%), Positives = 110/152 (72%), Gaps = 13/152 (8%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q+E+AF KQP K R++K+ GLGFKTP+ AIEG+YIDKKCPFTG V
Sbjct: 5 LTVQSERAFQKQPHIFNNPKIKTTKRAKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGMV 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRG+IL G S KM+RT+I+RR+YLH+V KY RYEKRH N+P H+SP FR+ GD +
Sbjct: 65 SIRGKILTGVVVSTKMHRTVIMRRDYLHYVPKYNRYEKRHKNVPVHVSPAFRINVGDIIT 124
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GQCRP+SKTVRFNV+KV ++ AKK FT
Sbjct: 125 AGQCRPISKTVRFNVVKV---AANASAKKQFT 153
>gi|444322209|ref|XP_004181760.1| hypothetical protein TBLA_0G03040 [Tetrapisispora blattae CBS 6284]
gi|387514805|emb|CCH62241.1| hypothetical protein TBLA_0G03040 [Tetrapisispora blattae CBS 6284]
Length = 155
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/152 (57%), Positives = 111/152 (73%), Gaps = 13/152 (8%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q+E+AF KQP + R++K++GLGFKTP+ AIEGTYIDKKCPFTG V
Sbjct: 5 LTVQSERAFQKQPHIFTNPKFKTSRRTKRWYKNVGLGFKTPKTAIEGTYIDKKCPFTGMV 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRG+IL GT S KM+RTI++RR+YLH++ KY R+EKRH N+P H+SP FRV+ GD V
Sbjct: 65 SIRGKILTGTVVSTKMHRTIVIRRDYLHYIPKYNRFEKRHKNVPVHVSPAFRVEVGDIVT 124
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GQCRP+SKTVRFNV+KV S + K FT
Sbjct: 125 AGQCRPISKTVRFNVVKV---ASGAKSNKKFT 153
>gi|62083389|gb|AAX62419.1| ribosomal protein S11 [Lysiphlebus testaceipes]
Length = 155
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/155 (60%), Positives = 110/155 (70%), Gaps = 17/155 (10%)
Query: 1 MAEQTEKAFLKQP--------GKGGN-----RFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MA+QTE+AF KQP G G R+ + +GLGFKTPREAIEG YIDKKCPFT
Sbjct: 1 MADQTERAFQKQPTVFLNRKKGTGSKSLKTPRYTRDVGLGFKTPREAIEGGYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
G VSIRGRIL KM RTI+VRR+YLH+++KY R+EKRH N+ H+SPCFR V+ G
Sbjct: 61 GNVSIRGRILTAVVLKMKMQRTIVVRRDYLHYIRKYNRFEKRHRNMSVHLSPCFRDVEIG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
D V IG+CRPLSKTVRFNVLKV G KK+F
Sbjct: 121 DVVTIGECRPLSKTVRFNVLKVTKG---TGVKKSF 152
>gi|112982861|ref|NP_001037111.1| ribosomal protein S11 isoform 2 [Bombyx mori]
gi|51863340|gb|AAU11818.1| ribosomal protein S11 [Bombyx mori]
gi|54609305|gb|AAV34868.1| ribosomal protein S11-2 [Bombyx mori]
Length = 152
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/139 (66%), Positives = 106/139 (76%), Gaps = 11/139 (7%)
Query: 1 MAEQTEKAFLKQPG-----KGGN-----RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
MA+QTEKAF KQ KGG R K++GLGFKTPREAIEGTYIDKKCPFTG V
Sbjct: 1 MADQTEKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNV 60
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
SIRGRIL G KM RTI++RR+YLH++ KY R+EKRH N+ H+SPCFR V+ GD V
Sbjct: 61 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 120
Query: 110 IIGQCRPLSKTVRFNVLKV 128
IG+CRPLSKTVRFNVLKV
Sbjct: 121 TIGECRPLSKTVRFNVLKV 139
>gi|409051592|gb|EKM61068.1| hypothetical protein PHACADRAFT_180219 [Phanerochaete carnosa
HHB-10118-sp]
Length = 154
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 88/141 (62%), Positives = 105/141 (74%), Gaps = 13/141 (9%)
Query: 1 MAEQTEKAFLKQ------PGKGGN-------RFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MAEQ EKA+ KQ +GG R++K +GLGFKTP EAI GTYIDKKCPFT
Sbjct: 1 MAEQIEKAYQKQHLFQNAKARGGKKVSTKEKRWYKDVGLGFKTPSEAISGTYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
G VSIRGRIL G S KM RT+++RR+YLH++ KY RYEKRH N+ AH+SP FRV+ GD
Sbjct: 61 GDVSIRGRILTGRVVSTKMTRTLVIRRDYLHYIPKYNRYEKRHKNLAAHVSPAFRVEIGD 120
Query: 108 HVIIGQCRPLSKTVRFNVLKV 128
V +GQCRPLSKTVRFNV++V
Sbjct: 121 IVTVGQCRPLSKTVRFNVIRV 141
>gi|296206714|ref|XP_002750334.1| PREDICTED: 40S ribosomal protein S11-like isoform 4 [Callithrix
jacchus]
Length = 158
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 115/158 (72%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+ G R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY +EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNHFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>gi|229366248|gb|ACQ58104.1| 40S ribosomal protein S11 [Anoplopoma fimbria]
Length = 161
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 95/161 (59%), Positives = 112/161 (69%), Gaps = 23/161 (14%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN-------RFWKSIGLGFKTPREAIEGTYID 41
MA+ QTE+A+ KQP GG R+ KS+GLGFKTPREAI+GTYID
Sbjct: 1 MADAQTERAYQKQPTIFQNKKRVLVADGGKEVKEKLPRYHKSVGLGFKTPREAIDGTYID 60
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
KKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH NI H+SPCF
Sbjct: 61 KKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNISVHLSPCF 120
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
R V GD V +G+CRPLSKTVRFNVL V A G KK F
Sbjct: 121 RDVSVGDIVTVGECRPLSKTVRFNVLNVTKA---AGVKKQF 158
>gi|393218644|gb|EJD04132.1| hypothetical protein FOMMEDRAFT_133467 [Fomitiporia mediterranea
MF3/22]
Length = 154
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 93/154 (60%), Positives = 109/154 (70%), Gaps = 16/154 (10%)
Query: 1 MAEQTEKAFLKQ------PGKGGN-------RFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MA+Q E+A+ KQ KGG R+ K +GLGFKTP EAI GTYIDKKCPFT
Sbjct: 1 MADQIERAYQKQHLFQNTKIKGGKKVVTKEKRWHKDVGLGFKTPLEAINGTYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
VSIRGRIL G S KMNRTI++RR+YLH++ KY RYEKRH N+ AH+SP FRV+ GD
Sbjct: 61 SDVSIRGRILTGKVVSTKMNRTIVIRRDYLHYIPKYNRYEKRHKNLAAHVSPAFRVELGD 120
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V +GQCRPLSKTVRFNVL+V+ S A K F
Sbjct: 121 MVTVGQCRPLSKTVRFNVLRVM---KSKAATKTF 151
>gi|255943359|ref|XP_002562448.1| Pc18g06210 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587181|emb|CAP94845.1| Pc18g06210 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 160
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 84/142 (59%), Positives = 104/142 (73%), Gaps = 14/142 (9%)
Query: 1 MAEQTEKAFLKQP--------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
+ Q+E+A+ KQP G R++K +GLGF+TP+ AIEGTYIDKKCPF
Sbjct: 5 LTVQSERAYQKQPHIFLNTKAKASSKKTAQGRRWYKDVGLGFRTPKTAIEGTYIDKKCPF 64
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
T VSIRGR+L G S KM+RT+++RR YLH+V KY RYE+RH N+ AH+SP FRV+EG
Sbjct: 65 TSQVSIRGRVLVGKVVSTKMHRTLVIRREYLHYVPKYNRYERRHKNLSAHVSPAFRVEEG 124
Query: 107 DHVIIGQCRPLSKTVRFNVLKV 128
D V +GQCRPLSKTVRFNVLKV
Sbjct: 125 DMVTVGQCRPLSKTVRFNVLKV 146
>gi|56462238|gb|AAV91402.1| ribosomal protein 4 [Lonomia obliqua]
Length = 155
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 106/142 (74%), Gaps = 14/142 (9%)
Query: 1 MAEQTEKAFLKQ------------PGKGGN-RFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MA+QTEKAF KQ PGK R K++GLGFKTPREAIEGTYIDKKCPFT
Sbjct: 1 MADQTEKAFQKQATVFLNRKGMAWPGKKKEMRHSKNVGLGFKTPREAIEGTYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
G VSIRGRIL G KM RTI++RR+YLH++ KY R+EKRH N+ H+SPCFR V+ G
Sbjct: 61 GNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVELG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKV 128
D V IG+CRPLSKTVRFNVLKV
Sbjct: 121 DIVTIGECRPLSKTVRFNVLKV 142
>gi|17542016|ref|NP_502186.1| Protein RPS-11 [Caenorhabditis elegans]
gi|3877016|emb|CAA97792.1| Protein RPS-11 [Caenorhabditis elegans]
Length = 155
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/156 (58%), Positives = 110/156 (70%), Gaps = 17/156 (10%)
Query: 1 MAEQTEKAFLKQPGKGGN-------------RFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
M+EQTE+AFLKQP N R+ + +GLGFK PR+A+EGTYIDKKCP+
Sbjct: 1 MSEQTERAFLKQPTVNLNNKARILAGSKKTPRYIREVGLGFKAPRDAVEGTYIDKKCPWA 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
G V IRG IL G KM RTI+VRR+YLH++KKY+RYEKRH N+PAH SP FR + G
Sbjct: 61 GNVPIRGMILTGVVLKNKMTRTIVVRRDYLHYIKKYRRYEKRHKNVPAHCSPAFRDIHPG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
D V IG+CRPLSKTVRFNVLKV SG +KK F+
Sbjct: 121 DLVTIGECRPLSKTVRFNVLKV---NKSGTSKKGFS 153
>gi|281348355|gb|EFB23939.1| hypothetical protein PANDA_006272 [Ailuropoda melanoleuca]
gi|351702735|gb|EHB05654.1| 40S ribosomal protein S11, partial [Heterocephalus glaber]
gi|355756041|gb|EHH59788.1| hypothetical protein EGM_09979, partial [Macaca fascicularis]
Length = 153
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/153 (60%), Positives = 112/153 (73%), Gaps = 19/153 (12%)
Query: 5 TEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKCPFTGT 49
TE+A+ KQP G+ G R++K+IGLGFKTP+EAIEGTYIDKKCPFTG
Sbjct: 1 TERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGN 60
Query: 50 VSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDH 108
VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD
Sbjct: 61 VSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDI 120
Query: 109 VIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 VTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 150
>gi|317134933|gb|ADV03029.1| ribosomal protein S11 [Karlodinium veneficum]
Length = 156
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 87/152 (57%), Positives = 105/152 (69%), Gaps = 13/152 (8%)
Query: 3 EQTEKAFLKQPG-------------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGT 49
+Q EKAF KQ K R+W+SIGLGF TP+EA +G ++DKKCPFTG
Sbjct: 2 DQNEKAFQKQDAVFIGSKRLLGKKSKKAARYWRSIGLGFATPKEAKDGNFVDKKCPFTGN 61
Query: 50 VSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHV 109
VSIRG++L G S KM RTII+RRNYLH++KKY R+EKRH N+ H SPCF VKEGD +
Sbjct: 62 VSIRGKVLKGMAISTKMKRTIIIRRNYLHYIKKYHRFEKRHKNVAVHCSPCFDVKEGDII 121
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GQCRPL+KTVRFNV+KV G A+K F
Sbjct: 122 TAGQCRPLAKTVRFNVVKVEKNQIFGSARKQF 153
>gi|403217682|emb|CCK72175.1| hypothetical protein KNAG_0J00930 [Kazachstania naganishii CBS
8797]
Length = 157
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 88/149 (59%), Positives = 106/149 (71%), Gaps = 10/149 (6%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q E+AF KQP + R++K+ GLG+KTP+ AIEG+YIDKKCPF G +
Sbjct: 5 LTVQYERAFQKQPHIFTNPKVKTNRRTKRWYKNAGLGYKTPKTAIEGSYIDKKCPFVGDI 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRG+IL GT S KM+RTII+RRNYLH+V KY RYEKRH N+P HISP FR + GD V
Sbjct: 65 SIRGKILTGTVVSTKMHRTIIIRRNYLHYVPKYNRYEKRHKNVPVHISPAFRAQIGDIVT 124
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKK 139
GQCRP+SKTVRFNVLKV PA K+
Sbjct: 125 AGQCRPISKTVRFNVLKVTPALGKAANKQ 153
>gi|392571465|gb|EIW64637.1| hypothetical protein TRAVEDRAFT_159130 [Trametes versicolor
FP-101664 SS1]
Length = 154
Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 92/154 (59%), Positives = 110/154 (71%), Gaps = 16/154 (10%)
Query: 1 MAEQTEKAFLKQP---------GKG----GNRFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MA+Q EKAF KQ GK R++K +GLGFKTP EAI+G+YIDKKCPFT
Sbjct: 1 MADQIEKAFQKQSIFQNAKARVGKKVVTKEKRWYKDVGLGFKTPSEAIQGSYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
G VSIRGRIL G S KM RT+I+RR+YLH++ KY RYEKRH N+ AH+SP FRV+ GD
Sbjct: 61 GEVSIRGRILTGRVISTKMTRTLIIRRDYLHYIPKYNRYEKRHKNLAAHVSPAFRVEVGD 120
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V +GQCRPLSKTVRFNVL+V + A K+F
Sbjct: 121 IVTVGQCRPLSKTVRFNVLRV---AKNKAAAKSF 151
>gi|315115397|gb|ADT80671.1| ribosomal protein S11 isoform 1 [Euphydryas aurinia]
Length = 156
Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 89/143 (62%), Positives = 106/143 (74%), Gaps = 15/143 (10%)
Query: 1 MAEQTEKAFLKQPGKGGNR--------------FWKSIGLGFKTPREAIEGTYIDKKCPF 46
MA++TE++F KQP NR + K +GLGFKTPREAIEGTYIDKKCPF
Sbjct: 1 MADKTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKE 105
TG VSIRGRIL G KM RTI++RR+YLH++ KY R+EKRH N+ H+SPCFR V++
Sbjct: 61 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEQ 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKV 128
GD V IG+CRPLSKTVRFNVLKV
Sbjct: 121 GDIVTIGECRPLSKTVRFNVLKV 143
>gi|197631903|gb|ACH70675.1| ribosomal protein S11 [Salmo salar]
Length = 161
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 95/161 (59%), Positives = 114/161 (70%), Gaps = 23/161 (14%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN-------RFWKSIGLGFKTPREAIEGTYID 41
MA+ QTE+A+ KQP G+GG R+ KS+GLGFKTPREAI+GTYID
Sbjct: 1 MADAQTERAYQKQPTIFQNKKRVLVGEGGKEAKEKLPRYHKSVGLGFKTPREAIDGTYID 60
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
KKCPF G VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SP F
Sbjct: 61 KKCPFIGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPAF 120
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
R V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 121 RDVSVGDIVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 158
>gi|34849855|gb|AAH58465.1| Ribosomal protein S11 [Rattus norvegicus]
Length = 158
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 115/158 (72%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+ G R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CR LSKTVRFNVLKV A G KK F
Sbjct: 121 QIGDIVTVGECRLLSKTVRFNVLKVTKA---AGTKKQF 155
>gi|164420683|ref|NP_001106708.1| ribosomal protein S11 isoform 1 [Bombyx mori]
gi|54609303|gb|AAV34867.1| ribosomal protein S11-1 [Bombyx mori]
gi|268306470|gb|ACY95356.1| ribosomal protein S11-1 [Manduca sexta]
Length = 156
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 90/143 (62%), Positives = 105/143 (73%), Gaps = 15/143 (10%)
Query: 1 MAEQTEKAFLKQPGKGGNR--------------FWKSIGLGFKTPREAIEGTYIDKKCPF 46
MA+QTE++F KQP NR + K +GLGFKTPREAIEGTYIDKKCPF
Sbjct: 1 MADQTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKE 105
TG VSIRGRIL G KM RTI++RR+YLH++ KY R+EKRH N+ H+SPCFR V+
Sbjct: 61 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEI 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKV 128
GD V IG+CRPLSKTVRFNVLKV
Sbjct: 121 GDIVTIGECRPLSKTVRFNVLKV 143
>gi|12836870|dbj|BAB23843.1| unnamed protein product [Mus musculus]
Length = 166
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 92/148 (62%), Positives = 112/148 (75%), Gaps = 17/148 (11%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+ G R++K+IGLGFKTPREAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPREAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPA 131
+ GD V +G+CRPLSKTVRFNVLKV A
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKA 148
>gi|67466589|ref|XP_649442.1| 40S ribosomal protein S11 [Entamoeba histolytica HM-1:IMSS]
gi|56465889|gb|EAL44060.1| 40S ribosomal protein S11, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449703153|gb|EMD43651.1| 40S ribosomal protein S11 [Entamoeba histolytica KU27]
Length = 156
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 99/155 (63%), Positives = 110/155 (70%), Gaps = 16/155 (10%)
Query: 1 MAEQTEKAFLKQ-------PGKG----GN--RFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MAEQTE+A+ KQ KG GN R+ K IG+GF TP EAI+GTYIDKKCPFT
Sbjct: 1 MAEQTERAYQKQVFHHHSRNEKGEIDFGNVKRYHKQIGMGFVTPAEAIKGTYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
VSIRGR L+G S M RTIIVRR+Y H+V KYQRYEKRH NI H SP FR +KEG
Sbjct: 61 SDVSIRGRTLSGIVKSCHMKRTIIVRRDYFHYVSKYQRYEKRHKNIAVHCSPAFRQLKEG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
DHV+IGQCRPLSKTVRFNVLK G+ G KK F
Sbjct: 121 DHVVIGQCRPLSKTVRFNVLKFTSRGT--GDKKQF 153
>gi|402217791|gb|EJT97870.1| hypothetical protein DACRYDRAFT_24816 [Dacryopinax sp. DJM-731 SS1]
Length = 153
Score = 181 bits (459), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 95/153 (62%), Positives = 109/153 (71%), Gaps = 15/153 (9%)
Query: 1 MAEQTEKAF----LKQPGK--GGN------RFWKSIGLGFKTPREAIEGTYIDKKCPFTG 48
MAEQ EKA+ L Q K GG R++K +GLGFKTP EAI GTYIDKKCPFT
Sbjct: 1 MAEQIEKAYQQQHLFQNAKRVGGKVSTKTKRWYKDVGLGFKTPAEAINGTYIDKKCPFTS 60
Query: 49 TVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDH 108
+SIRGRIL G S KM RTII+RR+YLH+V KY RYEKRH N+ AH+SP FRV+ GD
Sbjct: 61 DISIRGRILTGRVVSTKMTRTIIIRRDYLHYVPKYNRYEKRHKNLAAHVSPAFRVELGDM 120
Query: 109 VIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V +GQCRPLSKTVRFNVL+V S A K+F
Sbjct: 121 VTVGQCRPLSKTVRFNVLRV---AKSKEATKSF 150
>gi|432099329|gb|ELK28586.1| 40S ribosomal protein S11 [Myotis davidii]
Length = 244
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/157 (58%), Positives = 113/157 (71%), Gaps = 19/157 (12%)
Query: 1 MAEQTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ TE+A+ KQP G+ G R++K+IGLGFKTP+EAIEGTYIDKKCP
Sbjct: 88 LITTTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCP 147
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VK 104
FTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+
Sbjct: 148 FTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQ 207
Query: 105 EGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 208 IGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 241
>gi|327288000|ref|XP_003228716.1| PREDICTED: 40S ribosomal protein S11-like [Anolis carolinensis]
Length = 213
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/156 (58%), Positives = 113/156 (72%), Gaps = 19/156 (12%)
Query: 2 AEQTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKCPF 46
++TE+A+ KQP G G R++K+IGLGFKTP+EAIEGTYIDKKCPF
Sbjct: 58 TQKTERAYQKQPTIFQNKKRVLLGDTGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPF 117
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKE 105
TG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+
Sbjct: 118 TGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQI 177
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 178 GDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 210
>gi|407043832|gb|EKE42182.1| archaeal ribosomal protein S17P protein [Entamoeba nuttalli P19]
Length = 156
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/155 (62%), Positives = 108/155 (69%), Gaps = 16/155 (10%)
Query: 1 MAEQTEKAFLKQ-------PGKGG------NRFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MAEQTE+A+ KQ KG R+ K IG+GF TP EAI+GTYIDKKCPFT
Sbjct: 1 MAEQTERAYQKQVFHHHGRNDKGEIDFGSVKRYHKQIGMGFVTPAEAIKGTYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
VSIRGR L+G S M RTIIVRR+Y H+V KYQRYEKRH NI H SP FR +KEG
Sbjct: 61 SDVSIRGRTLSGIVKSCHMKRTIIVRRDYFHYVSKYQRYEKRHKNIAVHCSPAFRQLKEG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
DHV+IGQCRPLSKTVRFNVLK G+ G KK F
Sbjct: 121 DHVVIGQCRPLSKTVRFNVLKFTSRGT--GDKKQF 153
>gi|256273246|gb|EEU08189.1| Rps11ap [Saccharomyces cerevisiae JAY291]
Length = 157
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/152 (58%), Positives = 112/152 (73%), Gaps = 13/152 (8%)
Query: 1 MAEQTEKAFLK-QP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGT 49
+ Q+E+AF K QP K R++K+ GLGFKTP+ AIEG+YIDKKCPFTG
Sbjct: 5 LTVQSERAFQKVQPHIFNNPKVKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGL 64
Query: 50 VSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHV 109
VSIRG+IL GT S KM+RTI++RR YLH++ KY RYEKRH N+P H+SP FRV+ GD V
Sbjct: 65 VSIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFRVQVGDIV 124
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+GQCRP+SKTVRFNV+KV + ++G A K F
Sbjct: 125 TVGQCRPISKTVRFNVVKV--SAAAGKANKQF 154
>gi|407033699|gb|EKE36942.1| archaeal ribosomal protein S17P protein [Entamoeba nuttalli P19]
Length = 156
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/155 (62%), Positives = 108/155 (69%), Gaps = 16/155 (10%)
Query: 1 MAEQTEKAFLKQ-------PGKGG------NRFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MAEQTE+A+ KQ KG R+ K IG+GF TP EAI+GTYIDKKCPFT
Sbjct: 1 MAEQTERAYQKQVFHHHSRNEKGEIDFGSVKRYHKQIGMGFVTPAEAIKGTYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
VSIRGR L+G S M RTIIVRR+Y H+V KYQRYEKRH NI H SP FR +KEG
Sbjct: 61 SDVSIRGRTLSGIVKSCHMKRTIIVRRDYFHYVSKYQRYEKRHKNIAVHCSPAFRQLKEG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
DHV+IGQCRPLSKTVRFNVLK G+ G KK F
Sbjct: 121 DHVVIGQCRPLSKTVRFNVLKFTSRGT--GDKKQF 153
>gi|169843952|ref|XP_001828698.1| 40S ribosomal protein S11 [Coprinopsis cinerea okayama7#130]
gi|116510198|gb|EAU93093.1| ribosomal protein S11 [Coprinopsis cinerea okayama7#130]
Length = 155
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/155 (61%), Positives = 109/155 (70%), Gaps = 17/155 (10%)
Query: 1 MAE-QTEKAFLKQ------PGKGGN-------RFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MA+ Q EKAF KQ +GG R++K +GLGFKTP EAI GTYIDKKCPF
Sbjct: 1 MADAQVEKAFQKQHLFQNAKVRGGKKVSSKDKRWYKDVGLGFKTPSEAINGTYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
TG VSIRGRIL G S KM RTIIVRR+YLH++ KY RYEKRH N+ HISP FRV+ G
Sbjct: 61 TGNVSIRGRILTGKVVSTKMIRTIIVRRDYLHYIPKYNRYEKRHKNLAVHISPAFRVEVG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
D V +GQCRPLSKTVRFNVL+V + A KAF
Sbjct: 121 DTVTVGQCRPLSKTVRFNVLRV---AKNKAASKAF 152
>gi|167376448|ref|XP_001734001.1| 40S ribosomal protein S11 [Entamoeba dispar SAW760]
gi|165904690|gb|EDR29878.1| 40S ribosomal protein S11, putative [Entamoeba dispar SAW760]
Length = 156
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/155 (62%), Positives = 107/155 (69%), Gaps = 16/155 (10%)
Query: 1 MAEQTEKAFLKQ-------PGKGG------NRFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MAEQTE+A+ KQ KG R+ K IG+GF TP EAI GTYIDKKCPFT
Sbjct: 1 MAEQTERAYQKQVFHHHSRNEKGEIDFGSVKRYHKQIGMGFVTPAEAINGTYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
VSIRGR L+G S M RTIIVRR+Y H+V KYQRYEKRH NI H SP FR +KEG
Sbjct: 61 SDVSIRGRTLSGIVKSCHMKRTIIVRRDYFHYVSKYQRYEKRHKNIAVHCSPAFRQLKEG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
DHV+IGQCRPLSKTVRFNVLK G+ G KK F
Sbjct: 121 DHVVIGQCRPLSKTVRFNVLKFTSRGT--GDKKQF 153
>gi|67480803|ref|XP_655751.1| 40S ribosomal protein S11 [Entamoeba histolytica HM-1:IMSS]
gi|56472910|gb|EAL50365.1| 40S ribosomal protein S11, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449710689|gb|EMD49717.1| 40S ribosomal protein S11 [Entamoeba histolytica KU27]
Length = 156
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/155 (62%), Positives = 107/155 (69%), Gaps = 16/155 (10%)
Query: 1 MAEQTEKAFLKQ-------PGKGG------NRFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MAEQTE+A+ KQ KG R+ K IG+GF TP EAI GTYIDKKCPFT
Sbjct: 1 MAEQTERAYQKQVFHHHGRNDKGEIDFGSVKRYHKQIGMGFVTPAEAIRGTYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
VSIRGR L+G S M RTIIVRR+Y H+V KYQRYEKRH NI H SP FR +KEG
Sbjct: 61 SDVSIRGRTLSGIVKSCHMKRTIIVRRDYFHYVSKYQRYEKRHKNIAVHCSPAFRQLKEG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
DHV+IGQCRPLSKTVRFNVLK G+ G KK F
Sbjct: 121 DHVVIGQCRPLSKTVRFNVLKFTSRGT--GDKKQF 153
>gi|167390487|ref|XP_001739372.1| 40S ribosomal protein S11 [Entamoeba dispar SAW760]
gi|165896955|gb|EDR24243.1| 40S ribosomal protein S11, putative [Entamoeba dispar SAW760]
Length = 156
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/155 (62%), Positives = 107/155 (69%), Gaps = 16/155 (10%)
Query: 1 MAEQTEKAFLKQ-------PGKGG------NRFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MAEQTE+A+ KQ KG R+ K IG+GF TP EAI GTYIDKKCPFT
Sbjct: 1 MAEQTERAYQKQVFHHHGRNDKGEIDFGSIKRYHKQIGMGFVTPAEAINGTYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
VSIRGR L+G S M RTIIVRR+Y H+V KYQRYEKRH NI H SP FR +KEG
Sbjct: 61 SDVSIRGRTLSGIVKSCHMKRTIIVRRDYFHYVSKYQRYEKRHKNIAVHCSPAFRQLKEG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
DHV+IGQCRPLSKTVRFNVLK G+ G KK F
Sbjct: 121 DHVVIGQCRPLSKTVRFNVLKFTSRGT--GDKKQF 153
>gi|443717908|gb|ELU08745.1| hypothetical protein CAPTEDRAFT_165333 [Capitella teleta]
Length = 156
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/157 (60%), Positives = 111/157 (70%), Gaps = 18/157 (11%)
Query: 1 MAEQTEKAFLKQPGKGGN--------------RFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MA+Q E+AF KQ G N R+ K++GLGFKTPREA+EGTYIDKKCPF
Sbjct: 1 MADQVERAFQKQKGIFLNKKKVVVSGKASKTPRYVKNVGLGFKTPREAVEGTYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKE 105
TG VSIRGRIL+G KM RTI+VRR+YLH+V+KY R+EKRH NI AH SPCFR V
Sbjct: 61 TGNVSIRGRILSGIVMKTKMQRTIVVRRDYLHYVRKYNRFEKRHKNISAHCSPCFRDVAI 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V +G+CRPLSKTV FNV+KV SS KK F+
Sbjct: 121 GDIVTMGECRPLSKTVCFNVVKVNKGASS---KKGFS 154
>gi|328867712|gb|EGG16094.1| 40S ribosomal protein S11 [Dictyostelium fasciculatum]
Length = 155
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/155 (60%), Positives = 108/155 (69%), Gaps = 17/155 (10%)
Query: 1 MAE-QTEKAFLKQ-------------PGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MA+ Q+EKAF KQ + G R+WK+IGLGFKTP EAI GTYID KCPF
Sbjct: 1 MADVQSEKAFQKQNTIFRRRVYKTQTKTREGIRYWKAIGLGFKTPAEAINGTYIDNKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
T VSIRG I G S KM RT+IVRR+YLH++KKY R+EKRHSNIPAH SP F +KEG
Sbjct: 61 TSDVSIRGAIFKGQVISNKMKRTVIVRRDYLHYIKKYNRFEKRHSNIPAHASPAFNIKEG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
D V IGQCRPL+KTV+FNV++ SS KK F
Sbjct: 121 DTVTIGQCRPLTKTVKFNVIR---HDSSMLTKKQF 152
>gi|242347919|gb|ACS92720.1| ribosomal protein S11e [Mythimna separata]
Length = 152
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/139 (63%), Positives = 104/139 (74%), Gaps = 11/139 (7%)
Query: 1 MAEQTEKAFLKQPG----------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
MA+QTE+AF KQ + R K++GLGFKTPREAIEGTYIDKKCPFTG V
Sbjct: 1 MADQTERAFQKQATVFLNRKGVMKRKDMRHSKNVGLGFKTPREAIEGTYIDKKCPFTGNV 60
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
SIRGRIL G KM RTI++RR+YLH++ KY R+EKRH N+ H+SPCFR V+ GD V
Sbjct: 61 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVELGDIV 120
Query: 110 IIGQCRPLSKTVRFNVLKV 128
IG+CRPLSKT+RFNVLKV
Sbjct: 121 TIGECRPLSKTIRFNVLKV 139
>gi|336376404|gb|EGO04739.1| hypothetical protein SERLA73DRAFT_173933 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389444|gb|EGO30587.1| hypothetical protein SERLADRAFT_454887 [Serpula lacrymans var.
lacrymans S7.9]
Length = 154
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/150 (60%), Positives = 107/150 (71%), Gaps = 13/150 (8%)
Query: 1 MAEQTEKAFLKQ------PGKGGN-------RFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MAEQ EKA+ KQ +GG R++K +GLGFK P EA +GTYID+KCPFT
Sbjct: 1 MAEQIEKAYQKQHLFQNVKARGGKKLSAKDKRWYKDVGLGFKIPVEAAQGTYIDRKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
G VSIRGRIL G S KM RTII+RR+YLH+V KY RYEKRH N+ AH+SP FR + GD
Sbjct: 61 GDVSIRGRILTGKVVSTKMTRTIILRRDYLHYVPKYSRYEKRHKNLAAHVSPAFRAELGD 120
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGA 137
V +GQCRPLSKTVRFNVL+V ++G A
Sbjct: 121 IVTVGQCRPLSKTVRFNVLRVSKNKAAGKA 150
>gi|47087057|ref|NP_998542.1| 40S ribosomal protein S11 [Danio rerio]
gi|187607467|ref|NP_001120304.1| uncharacterized protein LOC100145364 [Xenopus (Silurana)
tropicalis]
gi|28374437|gb|AAH46054.1| Ribosomal protein S11 [Danio rerio]
gi|166796237|gb|AAI59195.1| Ribosomal protein S11 [Danio rerio]
gi|169642066|gb|AAI60802.1| LOC100145364 protein [Xenopus (Silurana) tropicalis]
Length = 159
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/159 (58%), Positives = 113/159 (71%), Gaps = 21/159 (13%)
Query: 1 MAE-QTEKAFLKQP-------------GKGGN---RFWKSIGLGFKTPREAIEGTYIDKK 43
MA+ Q E+A+ KQP G G R+ +++GLGFKTPREAI+GTYIDKK
Sbjct: 1 MADTQNERAYQKQPTIFQNKKRVLAVEGSGKEKLPRYHRNVGLGFKTPREAIDGTYIDKK 60
Query: 44 CPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR- 102
CPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR
Sbjct: 61 CPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRD 120
Query: 103 VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 121 VTVGDIVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 156
>gi|295314944|gb|ADF97622.1| ribosomal protein S11 [Hypophthalmichthys molitrix]
Length = 159
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/159 (58%), Positives = 113/159 (71%), Gaps = 21/159 (13%)
Query: 1 MAE-QTEKAFLKQP-------------GKGGN---RFWKSIGLGFKTPREAIEGTYIDKK 43
MA+ Q E+++ KQP G G R+ +++GLGFKTPREAIEGTYIDKK
Sbjct: 1 MADAQNERSYQKQPTIFQNKKRVLAVEGSGKEKLPRYHRNVGLGFKTPREAIEGTYIDKK 60
Query: 44 CPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR- 102
CPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR
Sbjct: 61 CPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRD 120
Query: 103 VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 121 VTPGDIVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 156
>gi|225716746|gb|ACO14219.1| 40S ribosomal protein S11 [Esox lucius]
Length = 169
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 112/158 (70%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQPGKGGN---------------RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ TE+A+ KQP N R+ KS+GLGFKTPREAI+GTYIDKKC
Sbjct: 1 MADVHTERAYQKQPTIFQNKKRVLVVEGAKEKLPRYHKSVGLGFKTPREAIDGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G + KM RTI++RR+YLH+++KY R+EKRH N+ H+SP FR V
Sbjct: 61 PFTGNVSIRGRILSGVVTNMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPAFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 121 MVGDIVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 155
>gi|390358150|ref|XP_003729190.1| PREDICTED: 40S ribosomal protein S11-like isoform 1
[Strongylocentrotus purpuratus]
Length = 155
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/154 (58%), Positives = 107/154 (69%), Gaps = 15/154 (9%)
Query: 1 MAEQTEKAFLKQP------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTG 48
MA+Q+E+AF KQP K NR +++GLGFKTP EA +G YIDKKCPFTG
Sbjct: 1 MADQSERAFQKQPTVFQNNKRLLASNKKANRLVRNVGLGFKTPAEARDGHYIDKKCPFTG 60
Query: 49 TVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGD 107
V IRGRIL G KM RTI++RR+YLH++KKY R+EKRH + H+SPCFR K GD
Sbjct: 61 NVHIRGRILTGVITKMKMQRTIVIRRDYLHYIKKYNRFEKRHKTMSVHLSPCFRDTKTGD 120
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V +G+CRPLSKTVRFNVLKV A G AKK F
Sbjct: 121 IVTVGECRPLSKTVRFNVLKVTQA--PGSAKKQF 152
>gi|209731124|gb|ACI66431.1| 40S ribosomal protein S11 [Salmo salar]
Length = 161
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/161 (59%), Positives = 114/161 (70%), Gaps = 23/161 (14%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN-------RFWKSIGLGFKTPREAIEGTYID 41
MA+ QTE+A+ KQP G+GG R+ KS+GLGFKTPREAI+GTYI
Sbjct: 1 MADAQTERAYQKQPTIFQNKKRVLVGEGGKEAKEKLPRYHKSVGLGFKTPREAIDGTYIY 60
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
KKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SP F
Sbjct: 61 KKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPAF 120
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
R V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 121 RDVSVGDIVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 158
>gi|148806513|gb|ABR13235.1| S11 ribosomal protein [Sparus aurata]
Length = 145
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/124 (69%), Positives = 100/124 (80%), Gaps = 4/124 (3%)
Query: 19 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
R+ KS+GLGFKTPREAI+GTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH
Sbjct: 23 RYHKSVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILSGVVTKXKMQRTIVIRRDYLH 82
Query: 79 FVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGA 137
+++KY R+EKRH NI H+SPCFR V GD V +G+CRPLSKTVRFNVLKV A GA
Sbjct: 83 YIRKYNRFEKRHKNISVHLSPCFRDVTVGDIVTVGECRPLSKTVRFNVLKVTKA---AGA 139
Query: 138 KKAF 141
KK F
Sbjct: 140 KKQF 143
>gi|431920762|gb|ELK18535.1| 60S ribosomal protein L13a [Pteropus alecto]
Length = 448
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/153 (60%), Positives = 112/153 (73%), Gaps = 19/153 (12%)
Query: 5 TEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKCPFTGT 49
TE+A+ KQP G+ G R++K+IGLGFKTP+EAIEGTYIDKKCPFTG
Sbjct: 296 TERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGN 355
Query: 50 VSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDH 108
VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD
Sbjct: 356 VSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDI 415
Query: 109 VIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 416 VTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 445
>gi|426201421|gb|EKV51344.1| 40S ribosomal protein S11 [Agaricus bisporus var. bisporus H97]
Length = 155
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/142 (62%), Positives = 105/142 (73%), Gaps = 14/142 (9%)
Query: 1 MAE-QTEKAFLKQ------PGKGGN-------RFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MA+ Q EKAF KQ +GG R++K +GLGFKTP +AI GTYIDKKCPF
Sbjct: 1 MADAQIEKAFQKQHLFQNAKARGGKKVVTRQKRWYKDVGLGFKTPSDAINGTYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
TG VSIRGRIL G S KM RTII+RR+YL ++ KY RYEKRH+N+ AH+SP FRV+ G
Sbjct: 61 TGDVSIRGRILTGKVLSTKMTRTIIIRRDYLRYISKYSRYEKRHTNLAAHVSPAFRVELG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKV 128
D V +GQCRPLSKTVRFNVL+V
Sbjct: 121 DTVTVGQCRPLSKTVRFNVLRV 142
>gi|319401873|ref|NP_001187218.1| 40S ribosomal protein S11 [Ictalurus punctatus]
gi|15294033|gb|AAK95193.1|AF402819_1 40S ribosomal protein S11 [Ictalurus punctatus]
Length = 159
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/159 (57%), Positives = 112/159 (70%), Gaps = 21/159 (13%)
Query: 1 MAE-QTEKAFLKQPGKGGN----------------RFWKSIGLGFKTPREAIEGTYIDKK 43
MA+ Q E+++ KQP N R+ +++GLGFKTPREAIEGTYIDKK
Sbjct: 1 MADTQNERSYQKQPTIFQNKKRVLVGEVGAKEKLPRYHRNVGLGFKTPREAIEGTYIDKK 60
Query: 44 CPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR- 102
CPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR
Sbjct: 61 CPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRD 120
Query: 103 VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 121 VTVGDIVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 156
>gi|405964878|gb|EKC30320.1| 40S ribosomal protein S11 [Crassostrea gigas]
Length = 190
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/155 (58%), Positives = 111/155 (71%), Gaps = 17/155 (10%)
Query: 2 AEQTEKAFLKQP--------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
TE++F KQP G+ R +KS+GLGF+TPREA+ GTYIDKKCPFT
Sbjct: 35 VHMTERSFQKQPTVFLNNKKNLMSVKGQKNTRHFKSVGLGFRTPREAMLGTYIDKKCPFT 94
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
G VSIRGRIL G KM RTI++RR+YLH+VKKY+R+EKRH N+ H+SPCFR V+ G
Sbjct: 95 GNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYVKKYKRFEKRHRNMSVHLSPCFRDVEMG 154
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
D V +G+CRPLSKTVRFNVLKV G++ +KK F
Sbjct: 155 DIVTVGECRPLSKTVRFNVLKVSKGGAN--SKKGF 187
>gi|442762107|gb|JAA73212.1| Putative 40s ribosomal protein s11, partial [Ixodes ricinus]
Length = 153
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/147 (62%), Positives = 103/147 (70%), Gaps = 9/147 (6%)
Query: 4 QTEKAFLKQPG-------KGGN--RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRG 54
Q KA+ KQP K G R+WK +G+GF TP+EA EGTYIDKKCPFTG VSIRG
Sbjct: 4 QVYKAYQKQPTISVMKLQKLGRKARYWKDVGMGFVTPKEAKEGTYIDKKCPFTGNVSIRG 63
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 114
RI+ G S KM RTII+R NYLH+VKKY R+EKRH NIP H SPCF V GD V +GQC
Sbjct: 64 RIIKGMVISTKMKRTIIMRVNYLHYVKKYNRFEKRHKNIPCHCSPCFEVNAGDIVTVGQC 123
Query: 115 RPLSKTVRFNVLKVIPAGSSGGAKKAF 141
RPLSKTVRFNVLKV G +K F
Sbjct: 124 RPLSKTVRFNVLKVEKNQIFGNPRKQF 150
>gi|148806517|gb|ABR13237.1| S11 ribosomal protein [Pomatoschistus sp. B03]
Length = 145
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/124 (68%), Positives = 100/124 (80%), Gaps = 4/124 (3%)
Query: 19 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
R+ KS+GLGFKTPREAI+GTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH
Sbjct: 23 RYHKSVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLH 82
Query: 79 FVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGA 137
+++KY R+EKRH N+ H+SPCFR V GD V +G+CRPLSKTVRFNVLKV A GA
Sbjct: 83 YIRKYNRFEKRHKNLSVHLSPCFRDVSVGDIVTVGECRPLSKTVRFNVLKVTKA---AGA 139
Query: 138 KKAF 141
KK F
Sbjct: 140 KKQF 143
>gi|401887268|gb|EJT51265.1| ribosomal protein S11 [Trichosporon asahii var. asahii CBS 2479]
gi|406702341|gb|EKD05372.1| ribosomal protein S11 [Trichosporon asahii var. asahii CBS 8904]
Length = 151
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/141 (62%), Positives = 105/141 (74%), Gaps = 7/141 (4%)
Query: 6 EKAFLKQPGKGGN------RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAG 59
++ F Q KGG R++K +GLGFKTP EAI GTYIDKKCPFTG VSIRGRIL G
Sbjct: 10 QRIFNAQKAKGGKVAPKTKRWYKDVGLGFKTPSEAINGTYIDKKCPFTGEVSIRGRILTG 69
Query: 60 TCHSA-KMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLS 118
HS+ KM TII+RR YLHF+ KY+RYEKRH N+ AH+SP FRV++GD V +GQCRPLS
Sbjct: 70 VVHSSGKMTNTIILRREYLHFIPKYRRYEKRHKNLAAHVSPAFRVEQGDTVTVGQCRPLS 129
Query: 119 KTVRFNVLKVIPAGSSGGAKK 139
KTVRFNVL+V ++ G K
Sbjct: 130 KTVRFNVLRVAKNKAAKGFNK 150
>gi|208657535|gb|ACI30064.1| 40S ribosomal protein S11 [Anopheles darlingi]
Length = 152
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/153 (58%), Positives = 109/153 (71%), Gaps = 14/153 (9%)
Query: 1 MAEQTEKAFLKQPG----------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
MA+Q +AF KQ G K G R +SIGLGFKTP+EAI G+YIDKKCPFTG +
Sbjct: 1 MADQNIRAFQKQLGINLNRKVVNKKRGLRIHRSIGLGFKTPKEAITGSYIDKKCPFTGHI 60
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
SIRGRIL G K RTI++RR+YLHF++KY R+EKRH N+ H+SPCFR V+ GD V
Sbjct: 61 SIRGRILTGVVRKMKTQRTIVIRRDYLHFIRKYDRFEKRHKNVSVHLSPCFRDVEAGDIV 120
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
+G+CRPLSKTVRFNVLKV G+KK F+
Sbjct: 121 TVGECRPLSKTVRFNVLKV---SKMAGSKKKFS 150
>gi|268306422|gb|ACY95332.1| ribosomal protein S11-2 [Manduca sexta]
Length = 152
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/139 (66%), Positives = 105/139 (75%), Gaps = 11/139 (7%)
Query: 1 MAEQTEKAFLKQPG-----KGGN-----RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
MA+QTEKAF KQ KGG R K++GLGFKTPREAIEGTYIDKKCPFTG V
Sbjct: 1 MADQTEKAFQKQLTVFLNRKGGMKRKDMRHSKNVGLGFKTPREAIEGTYIDKKCPFTGNV 60
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
SIRGRIL G KM RTI++RR+YLH++ KY R+EKRH N+ H+SPCFR V+ GD V
Sbjct: 61 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 120
Query: 110 IIGQCRPLSKTVRFNVLKV 128
IG+CRPL KTVRFNVLKV
Sbjct: 121 TIGECRPLFKTVRFNVLKV 139
>gi|164660246|ref|XP_001731246.1| hypothetical protein MGL_1429 [Malassezia globosa CBS 7966]
gi|159105146|gb|EDP44032.1| hypothetical protein MGL_1429 [Malassezia globosa CBS 7966]
Length = 158
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/148 (57%), Positives = 104/148 (70%), Gaps = 10/148 (6%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ QTE+AF KQP R++K +GLGFKTP A+ GTYIDKKCP+TG V
Sbjct: 6 LGVQTERAFQKQPLFLNSKVARKSTRAKRWYKDVGLGFKTPSAAVSGTYIDKKCPWTGLV 65
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRGR+L+G S KM RT+I+RR YLH+V KY RYE+RH N+ H+SP FRV+ GD ++
Sbjct: 66 SIRGRLLSGKVISTKMTRTVIIRREYLHYVSKYNRYERRHKNLAVHVSPAFRVEVGDIIV 125
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAK 138
GQCRPLSKTVRFN LKVI S+ AK
Sbjct: 126 AGQCRPLSKTVRFNTLKVIKNKSTERAK 153
>gi|409083537|gb|EKM83894.1| hypothetical protein AGABI1DRAFT_81629 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 155
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 89/142 (62%), Positives = 105/142 (73%), Gaps = 14/142 (9%)
Query: 1 MAE-QTEKAFLKQ------PGKGGN-------RFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MA+ Q EKAF KQ +GG R++K +GLGFKTP +AI GTYIDKKCPF
Sbjct: 1 MADAQIEKAFQKQHLFQNTKARGGKKVVTRQKRWYKDVGLGFKTPSDAINGTYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
TG VSIRGRIL G S KM RTII+RR+YL ++ KY RYEKRH+N+ AH+SP FRV+ G
Sbjct: 61 TGDVSIRGRILTGKVVSTKMTRTIIIRRDYLRYISKYSRYEKRHTNLAAHVSPAFRVELG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKV 128
D V +GQCRPLSKTVRFNVL+V
Sbjct: 121 DTVTVGQCRPLSKTVRFNVLRV 142
>gi|148806515|gb|ABR13236.1| S11 ribosomal protein [Atherina boyeri]
Length = 145
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/124 (68%), Positives = 100/124 (80%), Gaps = 4/124 (3%)
Query: 19 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
R+ KS+GLGFKTPREAI+GTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH
Sbjct: 23 RYHKSVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLH 82
Query: 79 FVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGA 137
+++KY R+EKRH N+ H+SPCFR V GD V +G+CRPLSKTVRFNVLKV A GA
Sbjct: 83 YIRKYNRFEKRHKNLSVHLSPCFRDVTVGDIVTVGECRPLSKTVRFNVLKVTKA---AGA 139
Query: 138 KKAF 141
KK F
Sbjct: 140 KKQF 143
>gi|159145760|gb|ABW90417.1| putative ribosomal protein S11 [Barentsia elongata]
Length = 165
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/157 (59%), Positives = 111/157 (70%), Gaps = 18/157 (11%)
Query: 1 MAEQTEKAFLKQP------------GKGGN--RFWKSIGLGFKTPREAIEGTYIDKKCPF 46
+AEQTE+AF KQ GK G R+ +++GLGFKTPR+A EGTY+DKKCPF
Sbjct: 10 IAEQTERAFQKQATVFLNNKKRLLAGKSGKVPRYTRNVGLGFKTPRDASEGTYVDKKCPF 69
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKE 105
TG VSIRGRIL G KM RTI +RR+YLH+VKKY R+EKRH NI H SPCFR VK
Sbjct: 70 TGNVSIRGRILTGIVTKCKMMRTITIRRDYLHYVKKYNRFEKRHKNISVHCSPCFRDVKP 129
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V +G+CRPLSKTVRFNVLKV G+ K+F+
Sbjct: 130 GDIVTVGECRPLSKTVRFNVLKV---SKGTGSSKSFS 163
>gi|148806521|gb|ABR13239.1| S11 ribosomal protein [Liza aurata]
Length = 145
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/124 (68%), Positives = 100/124 (80%), Gaps = 4/124 (3%)
Query: 19 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
R+ KS+GLGFKTPREAI+GTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH
Sbjct: 23 RYHKSVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLH 82
Query: 79 FVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGA 137
+++KY R+EKRH N+ H+SPCFR V GD V +G+CRPLSKTVRFNVLKV A GA
Sbjct: 83 YIRKYNRFEKRHKNLSVHLSPCFRDVTVGDIVTVGECRPLSKTVRFNVLKVTKA---AGA 139
Query: 138 KKAF 141
KK F
Sbjct: 140 KKQF 143
>gi|12847180|dbj|BAB27467.1| unnamed protein product [Mus musculus]
Length = 151
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 84/124 (67%), Positives = 101/124 (81%), Gaps = 4/124 (3%)
Query: 19 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
R++K+IGLGFKTP+EAIEGTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH
Sbjct: 28 RYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLH 87
Query: 79 FVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGA 137
+++KY R+EKRH N+ H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV A G
Sbjct: 88 YIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKA---AGT 144
Query: 138 KKAF 141
KK F
Sbjct: 145 KKQF 148
>gi|346323136|gb|EGX92734.1| 40S ribosomal protein S11 [Cordyceps militaris CM01]
Length = 327
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 111/188 (59%), Gaps = 55/188 (29%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYI----- 40
+ Q+E+AF KQP GK G R++K +GLGF+TP+ AIEG+YI
Sbjct: 131 LTVQSERAFQKQPHIFLNSKTKAKSARPGKSGRRWYKDVGLGFRTPKTAIEGSYIATFGK 190
Query: 41 -----------------------------------DKKCPFTGTVSIRGRILAGTCHSAK 65
DKKCPFTG VSIRGRIL GT S K
Sbjct: 191 PRRRRRIETRRRIMEPMRKRNIDISLRPSMLTSVLDKKCPFTGLVSIRGRILTGTVVSTK 250
Query: 66 MNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNV 125
M+RT+I+RR YLHF+ KY RYEKRH N+ AH+SP FRV+EGD V +GQCRPLSKTVRFNV
Sbjct: 251 MHRTLIIRREYLHFIPKYSRYEKRHKNLAAHVSPAFRVEEGDQVTVGQCRPLSKTVRFNV 310
Query: 126 LKVIPAGS 133
L+V+P S
Sbjct: 311 LRVLPRAS 318
>gi|148806519|gb|ABR13238.1| S11 ribosomal protein [Pomatoschistus sp. B01]
Length = 142
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/124 (68%), Positives = 100/124 (80%), Gaps = 4/124 (3%)
Query: 19 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
R+ KS+GLGFKTPREAI+GTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH
Sbjct: 20 RYHKSVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLH 79
Query: 79 FVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGA 137
+++KY R+EKRH N+ H+SPCFR V GD V +G+CRPLSKTVRFNVLKV A GA
Sbjct: 80 YIRKYNRFEKRHKNLSVHLSPCFRDVSVGDIVTVGECRPLSKTVRFNVLKVTKA---AGA 136
Query: 138 KKAF 141
KK F
Sbjct: 137 KKQF 140
>gi|340056660|emb|CCC50996.1| putative ribosomal protein S17 [Trypanosoma vivax Y486]
Length = 174
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 105/154 (68%), Gaps = 15/154 (9%)
Query: 4 QTEKAFLKQPGKGGN---------------RFWKSIGLGFKTPREAIEGTYIDKKCPFTG 48
Q EKA+ +Q G N R+ K IGLGF TP+ A+ G YID+KCPFT
Sbjct: 19 QLEKAYQRQTGVNENVRSATKKHVNRSGHVRYSKKIGLGFATPKAAVNGKYIDRKCPFTS 78
Query: 49 TVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDH 108
V+IRGRIL G HS KMNR+I++RRNYLHF++KYQRY+KRH N+ H SPCF K GD
Sbjct: 79 DVTIRGRILRGVVHSTKMNRSIVIRRNYLHFIRKYQRYQKRHRNLTVHCSPCFDPKPGDE 138
Query: 109 VIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
VI+GQCRPLSKT+R+NVL+++ ++ K FT
Sbjct: 139 VIVGQCRPLSKTIRYNVLQLVTKSAADKMGKKFT 172
>gi|322782675|gb|EFZ10538.1| hypothetical protein SINV_12371 [Solenopsis invicta]
Length = 152
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/152 (59%), Positives = 110/152 (72%), Gaps = 17/152 (11%)
Query: 4 QTEKAFLKQPGKGGNR-------------FWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
Q+E+AF KQP NR + +++GLGFKTPREA+EGTYIDKKCPFTG V
Sbjct: 1 QSERAFQKQPTIFLNRKKGLGPKRRKPMRYSRNVGLGFKTPREALEGTYIDKKCPFTGNV 60
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
SIRGRIL G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD V
Sbjct: 61 SIRGRILTGVVQKMKMQRTIVIRRDYLHYIRKYNRFEKRHRNMSVHLSPCFRDVEIGDVV 120
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IG+CRPLSKTVRFNVLKV G+KK+F
Sbjct: 121 TIGECRPLSKTVRFNVLKV---SKGTGSKKSF 149
>gi|388579103|gb|EIM19432.1| hypothetical protein WALSEDRAFT_34088 [Wallemia sebi CBS 633.66]
Length = 153
Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 102/141 (72%), Gaps = 12/141 (8%)
Query: 1 MAEQTEKAFLKQP-----GKGGN-------RFWKSIGLGFKTPREAIEGTYIDKKCPFTG 48
M Q K F KQP GN R++K +GLGFKTP+EA+ GTYIDKKCP+TG
Sbjct: 1 MEAQQLKTFPKQPIFQNSKTRGNKKVTKDRRWYKDVGLGFKTPQEAVTGTYIDKKCPWTG 60
Query: 49 TVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDH 108
VSIRGRIL G S KM RTI++RR YLH+V KY RYEKRH N+P H SP FR++ GD
Sbjct: 61 EVSIRGRILTGKVVSTKMTRTIVIRREYLHYVPKYNRYEKRHKNLPVHASPAFRIEVGDQ 120
Query: 109 VIIGQCRPLSKTVRFNVLKVI 129
V++GQCRPLSKTVRFNVL+VI
Sbjct: 121 VVVGQCRPLSKTVRFNVLRVI 141
>gi|2960399|dbj|BAA25142.1| 40S ribosomal protein S11 [Cyprinus carpio]
Length = 159
Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 93/159 (58%), Positives = 112/159 (70%), Gaps = 21/159 (13%)
Query: 1 MAE-QTEKAFLKQP-------------GKGGN---RFWKSIGLGFKTPREAIEGTYIDKK 43
MA+ Q E+A+ KQP G G R+ +++GLGFKTPREAI GTYIDKK
Sbjct: 1 MADIQNERAYQKQPTIFQNKKRVLAVEGSGKEKLPRYHRNVGLGFKTPREAIAGTYIDKK 60
Query: 44 CPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR- 102
CPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR
Sbjct: 61 CPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRD 120
Query: 103 VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 121 VTVGDIVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 156
>gi|225703288|gb|ACO07490.1| 40S ribosomal protein S11 [Oncorhynchus mykiss]
Length = 161
Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/161 (58%), Positives = 114/161 (70%), Gaps = 23/161 (14%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN-------RFWKSIGLGFKTPREAIEGTYID 41
MA+ QTE+A+ KQP G+GG R+ KS+GLGFKTPREAI+GTYID
Sbjct: 1 MADAQTERAYQKQPTIFQNKKRVLVGEGGKEAKEKLPRYHKSVGLGFKTPREAIDGTYID 60
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
KKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH ++ H+SP F
Sbjct: 61 KKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKSMSVHLSPAF 120
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
R V GD V +G+CR LSKTVRFNVLKV A GAKK F
Sbjct: 121 RDVSVGDIVTVGECRLLSKTVRFNVLKVTKA---AGAKKQF 158
>gi|40642986|emb|CAD91419.1| ribosomal protein S11 [Crassostrea gigas]
Length = 149
Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 85/139 (61%), Positives = 106/139 (76%), Gaps = 3/139 (2%)
Query: 4 QTEKAFLKQPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHS 63
+K + G+ R +KS+GLGF+TPREA+ GTYIDKKCPFTG VSIRGRIL G
Sbjct: 10 NNKKNLMSVKGQKNTRHFKSVGLGFRTPREAMLGTYIDKKCPFTGNVSIRGRILTGVVQK 69
Query: 64 AKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVR 122
KM RTI++RR+YLH+VKKY+R+EKRH N+ H+SPCFR V+ GD V +G+CRPLSKTVR
Sbjct: 70 MKMQRTIVIRRDYLHYVKKYKRFEKRHRNMSVHLSPCFRDVEMGDIVTVGECRPLSKTVR 129
Query: 123 FNVLKVIPAGSSGGAKKAF 141
FNVLKV G++ +KK F
Sbjct: 130 FNVLKVSKGGAN--SKKGF 146
>gi|49619071|gb|AAT68120.1| 40S ribosomal protein s11 [Danio rerio]
Length = 159
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 92/159 (57%), Positives = 113/159 (71%), Gaps = 21/159 (13%)
Query: 1 MAE-QTEKAFLKQP-------------GKGGN---RFWKSIGLGFKTPREAIEGTYIDKK 43
MA+ Q E+A+ KQP G G R+ +++GLGFKTPREAI+GTYID+K
Sbjct: 1 MADTQNERAYQKQPTIFQNKKRVLPVEGSGKEKLPRYHRNVGLGFKTPREAIDGTYIDRK 60
Query: 44 CPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR- 102
CPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR
Sbjct: 61 CPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRD 120
Query: 103 VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 121 VTVGDIVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 156
>gi|157690740|tpe|CAL69097.1| TPA: putative 40S ribosomal protein S11 isoform 1 [Spadella
cephaloptera]
Length = 156
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 90/156 (57%), Positives = 110/156 (70%), Gaps = 18/156 (11%)
Query: 1 MAEQTEKAFLKQPGK---------GGN-----RFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MA+QTE+AF KQ GN R+ K++GLGFKTP EA EG YIDKKCPF
Sbjct: 1 MADQTERAFQKQKNVFLNSKATLIAGNKAKKVRYVKNVGLGFKTPIEAKEGHYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKE 105
TG V IRGRIL+G KM RT+++RR+YLH+++KY+R+EKRH NI AH+SPCFR +
Sbjct: 61 TGLVQIRGRILSGVVQKLKMQRTLVIRRDYLHYIRKYKRFEKRHRNISAHVSPCFRDIAV 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V +G+CRPLSKTVRFNV+KV S AKK F
Sbjct: 121 GDTVTVGECRPLSKTVRFNVIKVT---KSAAAKKQF 153
>gi|395526420|ref|XP_003765361.1| PREDICTED: uncharacterized protein LOC100913245 [Sarcophilus
harrisii]
Length = 349
Score = 178 bits (451), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 91/154 (59%), Positives = 111/154 (72%), Gaps = 19/154 (12%)
Query: 4 QTEKAFLKQPGKGGN---------------RFWKSIGLGFKTPREAIEGTYIDKKCPFTG 48
+TE+A+ KQP N R++K+IGLGFKTP+EAIEGTYIDKKCPFTG
Sbjct: 196 ETERAYQKQPTIFQNKKRVLLGDTAKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 255
Query: 49 TVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGD 107
VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD
Sbjct: 256 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGD 315
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 316 IVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 346
>gi|67084035|gb|AAY66952.1| 40S ribosomal protein S11 [Ixodes scapularis]
Length = 156
Score = 178 bits (451), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 94/159 (59%), Positives = 110/159 (69%), Gaps = 18/159 (11%)
Query: 1 MAEQTEKAFLKQPG---------KGGN-----RFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MAEQ E+AF KQP GN R+ K++GLGFKTPR+A GTYIDKKCPF
Sbjct: 1 MAEQNERAFQKQPTVFLNRKPTLPKGNPKRVLRYHKNVGLGFKTPRDASHGTYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKE 105
TG VSIRGRIL G KM RTI++RR+YLH+V+KY R+EKRH N+ H+SP FR V
Sbjct: 61 TGNVSIRGRILRGVVIKMKMQRTIVIRRDYLHYVRKYNRFEKRHRNMSVHLSPAFRDVAI 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GD V +G+CRPLSKTVRFNVLKV A G+KK F M
Sbjct: 121 GDVVTVGECRPLSKTVRFNVLKVTKA---AGSKKQFLKM 156
>gi|403419626|emb|CCM06326.1| predicted protein [Fibroporia radiculosa]
Length = 155
Score = 178 bits (451), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 89/142 (62%), Positives = 105/142 (73%), Gaps = 14/142 (9%)
Query: 1 MAE-QTEKAFLKQ------PGKGGN-------RFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MA+ Q EKA+ KQ +GG R++K +GLGFKTP EAI GTYIDKKCPF
Sbjct: 1 MADHQIEKAYQKQHLFQNAKARGGQKVSTKEKRWYKDVGLGFKTPAEAINGTYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
TG VSIRGRIL G S KM RTII+RR+YLH++ KY RYEKRH N+ AH+SP FRV+ G
Sbjct: 61 TGDVSIRGRILTGRVVSTKMTRTIIIRRDYLHYIPKYNRYEKRHKNLAAHVSPAFRVELG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKV 128
D V +GQCRPLSKTVRFNV++V
Sbjct: 121 DIVTVGQCRPLSKTVRFNVIRV 142
>gi|158299021|ref|XP_319141.3| AGAP009998-PA [Anopheles gambiae str. PEST]
gi|109915165|sp|P52812.2|RS11_ANOGA RecName: Full=40S ribosomal protein S11
gi|157014168|gb|EAA13929.3| AGAP009998-PA [Anopheles gambiae str. PEST]
Length = 153
Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 92/154 (59%), Positives = 110/154 (71%), Gaps = 15/154 (9%)
Query: 1 MAEQTE-KAFLKQPG----------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGT 49
MA+Q +AF KQ G K G R SIGLGFKTP+EAI GTYIDKKCPFTG
Sbjct: 1 MADQQNIRAFQKQLGINLNRKNVSRKKGLRMHHSIGLGFKTPKEAITGTYIDKKCPFTGH 60
Query: 50 VSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDH 108
+SIRGRIL G KM+RTI++RR+YLHF++KY R+EKRH N+ H+SPCFR V+ GD
Sbjct: 61 ISIRGRILTGVVRKMKMHRTIVIRRDYLHFIRKYDRFEKRHRNMSVHLSPCFRDVEAGDI 120
Query: 109 VIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
V +G+CRPLSKTVRFNVLKV G+KK F+
Sbjct: 121 VTVGECRPLSKTVRFNVLKV---SKMAGSKKKFS 151
>gi|238637972|gb|ACR53996.1| RE28480p [Drosophila melanogaster]
gi|238637976|gb|ACR53998.1| RH03287p [Drosophila melanogaster]
Length = 161
Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 94/155 (60%), Positives = 108/155 (69%), Gaps = 17/155 (10%)
Query: 1 MAEQTEKAFLKQPGKGGNRFWK-------------SIGLGFKTPREAIEGTYIDKKCPFT 47
MA+Q E+AF KQ G NR K +GLGFKTPREAI+GTYIDKKCP+T
Sbjct: 7 MADQNERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWT 66
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
G V IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ G
Sbjct: 67 GDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHG 126
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
D V IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 127 DIVTIGECRPLSKTVRFNVLKV---SKGQGAKKSF 158
>gi|242212409|ref|XP_002472038.1| 40S ribosomal protein S11 [Postia placenta Mad-698-R]
gi|220728861|gb|EED82746.1| 40S ribosomal protein S11 [Postia placenta Mad-698-R]
Length = 155
Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 88/142 (61%), Positives = 105/142 (73%), Gaps = 14/142 (9%)
Query: 1 MAE-QTEKAFLKQ------PGKGGN-------RFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MA+ Q EKA+ KQ +GG R++K +GLGFKTP EAI GTYIDKKCPF
Sbjct: 1 MADIQIEKAYQKQFLFQNAKARGGKKVSTKEKRWYKDVGLGFKTPSEAISGTYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
TG VSIRGRIL G S KM RTI++RR+YLH++ KY RYEKRH N+ AH+SP FRV+ G
Sbjct: 61 TGNVSIRGRILTGRVVSTKMTRTIVIRRDYLHYIPKYNRYEKRHKNLAAHVSPAFRVEVG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKV 128
D V +GQCRPLSKTVRFNV++V
Sbjct: 121 DIVTVGQCRPLSKTVRFNVVRV 142
>gi|429327398|gb|AFZ79158.1| 40S ribosomal protein S17, putative [Babesia equi]
Length = 156
Score = 177 bits (450), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 91/147 (61%), Positives = 101/147 (68%), Gaps = 9/147 (6%)
Query: 4 QTEKAFLKQPG-------KGGNR--FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRG 54
Q KAF KQP K GNR +WK +G+GF TP+EA EG YIDKKCPFTG +SIRG
Sbjct: 7 QVYKAFQKQPTVSIKKIQKLGNRARYWKDVGMGFSTPKEAKEGVYIDKKCPFTGNISIRG 66
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 114
RI+ G S KM RTII+R NYLH+V KY R+EKRH NIP H SPCF V GD V GQC
Sbjct: 67 RIVKGMVISTKMKRTIIMRVNYLHYVPKYNRFEKRHKNIPCHCSPCFTVTSGDIVTAGQC 126
Query: 115 RPLSKTVRFNVLKVIPAGSSGGAKKAF 141
RPLSKTVRFNVLKV G +K F
Sbjct: 127 RPLSKTVRFNVLKVEKNEVFGNPRKQF 153
>gi|24652922|ref|NP_725114.1| ribosomal protein S11, isoform C [Drosophila melanogaster]
gi|74917192|sp|Q6XHX5.1|RS11_DROYA RecName: Full=40S ribosomal protein S11
gi|121953145|sp|Q0E9B6.1|RS11_DROME RecName: Full=40S ribosomal protein S11
gi|21645480|gb|AAM71028.1| ribosomal protein S11, isoform C [Drosophila melanogaster]
gi|38048355|gb|AAR10080.1| similar to Drosophila melanogaster CG8857, partial [Drosophila
yakuba]
Length = 155
Score = 177 bits (450), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 94/155 (60%), Positives = 108/155 (69%), Gaps = 17/155 (10%)
Query: 1 MAEQTEKAFLKQPGKGGNRFWK-------------SIGLGFKTPREAIEGTYIDKKCPFT 47
MA+Q E+AF KQ G NR K +GLGFKTPREAI+GTYIDKKCP+T
Sbjct: 1 MADQNERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
G V IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ G
Sbjct: 61 GDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
D V IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 121 DIVTIGECRPLSKTVRFNVLKV---SKGQGAKKSF 152
>gi|342183803|emb|CCC93283.1| putative 40S ribosomal proteins S11 [Trypanosoma congolense IL3000]
Length = 174
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 81/141 (57%), Positives = 102/141 (72%), Gaps = 1/141 (0%)
Query: 3 EQTEKAFLKQPGKGGN-RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTC 61
E A K + G+ R+ K IGLGF TP+ AIEG YID+KCPFT VSIRGRIL G
Sbjct: 32 ENIRSAARKHVNRSGHVRYSKKIGLGFATPKAAIEGKYIDRKCPFTSNVSIRGRILRGVV 91
Query: 62 HSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTV 121
HS KM R+I++RRNYLHF++KYQRY+KRH N+ H SPCF K GD V++GQCRPLSKT+
Sbjct: 92 HSTKMRRSIVIRRNYLHFIRKYQRYQKRHRNLTVHCSPCFDPKPGDEVVVGQCRPLSKTI 151
Query: 122 RFNVLKVIPAGSSGGAKKAFT 142
R+NVL+V+ ++ K F+
Sbjct: 152 RYNVLQVVTKSAADRMGKKFS 172
>gi|342179912|emb|CCC89386.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 174
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 104/154 (67%), Gaps = 15/154 (9%)
Query: 4 QTEKAFLKQPGKGGN---------------RFWKSIGLGFKTPREAIEGTYIDKKCPFTG 48
Q EKA+ +Q N R+ K IGLGF TP+ AIEG YID+KCPFT
Sbjct: 19 QHEKAYQRQTAVNENIRGAARKHVNRSGHVRYSKKIGLGFATPKSAIEGKYIDRKCPFTS 78
Query: 49 TVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDH 108
VSIRGRIL G HS KM R+I++RRNYLHF++KYQRY+KRH N+ H SPCF K GD
Sbjct: 79 NVSIRGRILRGVVHSTKMRRSIVIRRNYLHFIRKYQRYQKRHRNLTVHCSPCFDPKPGDE 138
Query: 109 VIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
V++GQCRPLSKT+R+NVL+V+ ++ K F+
Sbjct: 139 VVVGQCRPLSKTIRYNVLQVVTKSAADRMGKKFS 172
>gi|308804942|ref|XP_003079783.1| RS11_EUPES 40S ribosomal protein S11 (ISS) [Ostreococcus tauri]
gi|116058240|emb|CAL53429.1| RS11_EUPES 40S ribosomal protein S11 (ISS) [Ostreococcus tauri]
Length = 131
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 82/107 (76%), Positives = 92/107 (85%), Gaps = 2/107 (1%)
Query: 37 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 96
GTYIDKKCPFTG VSIRGRIL G SAKMNRTI++R +YLHF++KYQRYEKRH+NI AH
Sbjct: 26 GTYIDKKCPFTGNVSIRGRILTGVVKSAKMNRTIVMRMDYLHFIRKYQRYEKRHTNISAH 85
Query: 97 ISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTA 143
+SPCFR EGD V++GQCRPLSKTVRFN LKVIP+GS GG KAF A
Sbjct: 86 LSPCFRCNEGDKVVVGQCRPLSKTVRFNTLKVIPSGSKGG--KAFVA 130
>gi|559943|emb|CAA86390.1| ribosomal protein S18 [Saccharomyces cerevisiae]
gi|392300886|gb|EIW11975.1| Rps11bp [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 147
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/143 (59%), Positives = 107/143 (74%), Gaps = 12/143 (8%)
Query: 9 FLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILA 58
F++QP K R++K+ GLGFKTP+ AIEG+YIDKKCPFTG VSIRG+IL
Sbjct: 4 FIQQPHIFNNPKVKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSIRGKILT 63
Query: 59 GTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLS 118
GT S KM+RTI++RR YLH++ KY RYEKRH N+P H+SP FRV+ GD V +GQCRP+S
Sbjct: 64 GTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFRVQVGDIVTVGQCRPIS 123
Query: 119 KTVRFNVLKVIPAGSSGGAKKAF 141
KTVRFNV+KV + ++G A K F
Sbjct: 124 KTVRFNVVKV--SAAAGKANKQF 144
>gi|401409510|ref|XP_003884203.1| hypothetical protein NCLIV_046040 [Neospora caninum Liverpool]
gi|325118621|emb|CBZ54172.1| hypothetical protein NCLIV_046040 [Neospora caninum Liverpool]
Length = 161
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/152 (57%), Positives = 103/152 (67%), Gaps = 14/152 (9%)
Query: 4 QTEKAFLKQPG-------------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
QTE+AF KQ G K R+WK +GLGF+TPR A E Y+DKKCPFTG V
Sbjct: 7 QTERAFQKQDGVSSLGRVHLTGQKKRTQRYWKDVGLGFQTPRLAKESKYVDKKCPFTGNV 66
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF-RVKEGDHV 109
SIRGR++ G S KM R +++RRNYLHFV KY R+EKRH N+ H+SPCF +VKEGD V
Sbjct: 67 SIRGRVIKGMVVSTKMKRAVVIRRNYLHFVPKYSRFEKRHKNVTCHLSPCFEQVKEGDIV 126
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GQCRPLSKT+RFNVLKV G +K F
Sbjct: 127 TAGQCRPLSKTIRFNVLKVEKNQVFGNVRKQF 158
>gi|237834105|ref|XP_002366350.1| 40S ribosomal protein S11, putative [Toxoplasma gondii ME49]
gi|211964014|gb|EEA99209.1| 40S ribosomal protein S11, putative [Toxoplasma gondii ME49]
gi|221486575|gb|EEE24836.1| 40S ribosomal protein S11, putative [Toxoplasma gondii GT1]
gi|221508336|gb|EEE33923.1| 40S ribosomal protein S11, putative [Toxoplasma gondii VEG]
Length = 161
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/152 (57%), Positives = 103/152 (67%), Gaps = 14/152 (9%)
Query: 4 QTEKAFLKQPG-------------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
QTE+AF KQ G K R+WK +GLGF+TPR A E Y+DKKCPFTG V
Sbjct: 7 QTERAFQKQDGVSSLGRLHLTGQKKRTQRYWKDVGLGFQTPRLAKESKYVDKKCPFTGNV 66
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF-RVKEGDHV 109
SIRGR++ G S KM R +++RRNYLHFV KY R+EKRH N+ H+SPCF +VKEGD V
Sbjct: 67 SIRGRVIKGMVISTKMKRAVVIRRNYLHFVPKYSRFEKRHKNVTCHLSPCFEQVKEGDIV 126
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GQCRPLSKT+RFNVLKV G +K F
Sbjct: 127 TAGQCRPLSKTIRFNVLKVEKNQVFGNVRKQF 158
>gi|115504447|ref|XP_001219016.1| 40S ribosomal protein S11 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|83642498|emb|CAJ16529.1| 40S ribosomal protein S11, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261326202|emb|CBH09028.1| 40S ribosomal protein S11, putative [Trypanosoma brucei gambiense
DAL972]
gi|289739663|gb|ADD18579.1| putative 40S ribosomal protein S11 [Glossina morsitans morsitans]
Length = 174
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 104/157 (66%), Gaps = 15/157 (9%)
Query: 1 MAEQTEKAFLKQPGKGGN---------------RFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q EKA+ +Q N R+ K IGLGF TP+ AI G YID+KCP
Sbjct: 16 LTVQHEKAYQRQTAVNENIRTASKKHVNRSGHIRYSKKIGLGFATPKAAINGKYIDRKCP 75
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FT VSIRGRIL G HS KM R+I++RRNYLHF++KYQRY+KRH NI H SPCF K
Sbjct: 76 FTSNVSIRGRILRGVVHSTKMRRSIVIRRNYLHFIRKYQRYQKRHRNITVHCSPCFDPKP 135
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V++GQCRPLSKT+R+NVL+V+ ++ K F+
Sbjct: 136 GDEVVVGQCRPLSKTIRYNVLQVVSKSAADKMGKKFS 172
>gi|340052225|emb|CCC46496.1| putative ribosomal protein [Trypanosoma vivax Y486]
Length = 174
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/153 (53%), Positives = 104/153 (67%), Gaps = 15/153 (9%)
Query: 4 QTEKAFLKQPGKGGN---------------RFWKSIGLGFKTPREAIEGTYIDKKCPFTG 48
Q EKA+ +Q G N R+ K IGLGF TP+ A+ G YID+KCPFT
Sbjct: 19 QLEKAYQRQTGVNENVRSATKKHVNRSGHVRYSKKIGLGFATPKAAVNGKYIDRKCPFTS 78
Query: 49 TVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDH 108
V+IRGRIL G HS KMNR+I++RRNYLHF++KYQRY+KRH N+ H SPCF K GD
Sbjct: 79 DVTIRGRILRGVVHSTKMNRSIVIRRNYLHFIRKYQRYQKRHRNLTVHCSPCFDPKPGDE 138
Query: 109 VIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
VI+GQCRPLSKT+R+NVL+++ ++ K F
Sbjct: 139 VIVGQCRPLSKTIRYNVLQLVTKSAADKMGKKF 171
>gi|143462442|sp|Q292D0.2|RS11_DROPS RecName: Full=40S ribosomal protein S11
Length = 155
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/155 (59%), Positives = 108/155 (69%), Gaps = 17/155 (10%)
Query: 1 MAEQTEKAFLKQPGKGGNR-------------FWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MA+Q E+AF KQ G NR ++ +GLGFKTPREAI+GTYIDKKCP+T
Sbjct: 1 MADQNERAFQKQFGVNLNRKVKPGVTKKKILRRYRDVGLGFKTPREAIDGTYIDKKCPWT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
G V IRGRIL G KM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ G
Sbjct: 61 GDVRIRGRILIGVVRKTKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPAFRDVEHG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
D V IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 121 DIVTIGECRPLSKTVRFNVLKV---NKGQGAKKSF 152
>gi|71746518|ref|XP_822314.1| 40S ribosomal protein S11 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|449802200|pdb|3ZEY|E Chain E, High-resolution Cryo-electron Microscopy Structure Of The
Trypanosoma Brucei Ribosome
gi|70831982|gb|EAN77486.1| 40S ribosomal proteins S11, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 174
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 104/157 (66%), Gaps = 15/157 (9%)
Query: 1 MAEQTEKAFLKQPGKGGN---------------RFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q EKA+ +Q N R+ K IGLGF TP+ AI G YID+KCP
Sbjct: 16 LTVQHEKAYQRQTAVNENIRTASKKHVNRSGHIRYSKKIGLGFATPKAAINGKYIDRKCP 75
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FT VSIRGRIL G HS KM R+I++RRNYLHF++KYQRY+KRH NI H SPCF K
Sbjct: 76 FTSNVSIRGRILRGVVHSTKMRRSIVIRRNYLHFIRKYQRYQKRHRNITVHCSPCFDPKP 135
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V++GQCRPLSKT+R+NVL+V+ ++ K F+
Sbjct: 136 GDEVVVGQCRPLSKTIRYNVLQVVSKSAADKMGKKFS 172
>gi|270010086|gb|EFA06534.1| hypothetical protein TcasGA2_TC009438 [Tribolium castaneum]
Length = 194
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/136 (62%), Positives = 103/136 (75%), Gaps = 11/136 (8%)
Query: 4 QTEKAFLKQPGKGGNR----------FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIR 53
+TE+AF +Q G NR +++GLGFKTPREAIEG+YIDKKCPFTG VSIR
Sbjct: 46 ETERAFQRQHGINVNRKAGLKKKVLRLSRNVGLGFKTPREAIEGSYIDKKCPFTGNVSIR 105
Query: 54 GRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIG 112
GRIL G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD V IG
Sbjct: 106 GRILTGVVQKMKMQRTIVIRRDYLHYIRKYNRFEKRHRNMSVHLSPCFRDVEIGDVVTIG 165
Query: 113 QCRPLSKTVRFNVLKV 128
+CRPLSKTVRFNVLKV
Sbjct: 166 ECRPLSKTVRFNVLKV 181
>gi|442763093|gb|JAA73705.1| Putative 40s ribosomal protein s11, partial [Ixodes ricinus]
Length = 183
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/156 (58%), Positives = 108/156 (69%), Gaps = 18/156 (11%)
Query: 1 MAEQTEKAFLKQPGKGGNR--------------FWKSIGLGFKTPREAIEGTYIDKKCPF 46
MAEQ E+AF KQP NR + K++GLGFKTPR+A GTYIDKKCPF
Sbjct: 1 MAEQNERAFQKQPTVFLNRKPTLPKGNPKRVLRYHKNVGLGFKTPRDASHGTYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKE 105
TG VSIRGRIL G KM RTI++RR+YLH+V+KY R+EKRH N+ H+SP FR V
Sbjct: 61 TGNVSIRGRILRGVVIKMKMQRTIVIRRDYLHYVRKYNRFEKRHRNMSVHLSPAFRDVAI 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V +G+CRPLSKTVRFNVLKV A G+KK F
Sbjct: 121 GDVVTVGECRPLSKTVRFNVLKVTKA---AGSKKQF 153
>gi|238477343|gb|ACR43483.1| ribosomal protein S11 [Rimicaris exoculata]
Length = 153
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/152 (61%), Positives = 108/152 (71%), Gaps = 16/152 (10%)
Query: 3 EQTEKAFLKQP----------GKG--GNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
EQTE+AF KQ GK G R+ + +GLGFKTPREA EGTYIDKKCPFTG V
Sbjct: 2 EQTERAFQKQACVFLNRKKVLGKRPRGTRYMRKVGLGFKTPREAKEGTYIDKKCPFTGNV 61
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
SIRGRIL G KM+RTI +RR+YLH+VKKY R+EKRH N+ H+SPCFR V+ GD V
Sbjct: 62 SIRGRILTGVVQKMKMHRTITIRRDYLHYVKKYNRFEKRHRNMSVHLSPCFRDVRPGDIV 121
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+G+CR L+KTVRFNVLKV A G KK F
Sbjct: 122 TVGECRSLAKTVRFNVLKVTKA---PGTKKMF 150
>gi|323306095|gb|EGA59829.1| Rps11bp [Saccharomyces cerevisiae FostersB]
gi|323334534|gb|EGA75908.1| Rps11bp [Saccharomyces cerevisiae AWRI796]
gi|323349687|gb|EGA83902.1| Rps11bp [Saccharomyces cerevisiae Lalvin QA23]
gi|323356315|gb|EGA88119.1| Rps11bp [Saccharomyces cerevisiae VL3]
gi|365767105|gb|EHN08593.1| Rps11ap [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 147
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/128 (64%), Positives = 102/128 (79%), Gaps = 2/128 (1%)
Query: 14 GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVR 73
K R++K+ GLGFKTP+ AIEG+YIDKKCPFTG VSIRG+IL GT S KM+RTI++R
Sbjct: 19 SKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTKMHRTIVIR 78
Query: 74 RNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGS 133
R YLH++ KY RYEKRH N+P H+SP FRV+ GD V +GQCRP+SKTVRFNV+KV + +
Sbjct: 79 RAYLHYIPKYNRYEKRHKNVPVHVSPAFRVQVGDIVTVGQCRPISKTVRFNVVKV--SAA 136
Query: 134 SGGAKKAF 141
+G A K F
Sbjct: 137 AGKANKQF 144
>gi|218117261|emb|CAQ37759.1| 40S ribosomal protein S11 [Brachionus plicatilis]
Length = 150
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/151 (59%), Positives = 109/151 (72%), Gaps = 17/151 (11%)
Query: 6 EKAFLKQPGKGGN-------------RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSI 52
E++F KQP N R+ K++GLGFKTP+EA +GTYIDKKCPFTG VSI
Sbjct: 1 ERSFQKQPTIFLNKKSQVAKSRDRTERYTKNVGLGFKTPKEAADGTYIDKKCPFTGNVSI 60
Query: 53 RGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVII 111
RGRIL+G KM RTI++RR+YLH+V+KY R+EKRH NI AH SPCFR V+ GD +
Sbjct: 61 RGRILSGVVIKNKMTRTIVIRRDYLHYVRKYNRFEKRHKNISAHCSPCFRDVQVGDLATV 120
Query: 112 GQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
G+CRPLSKTVRFNVLKV S+ GAKK F+
Sbjct: 121 GECRPLSKTVRFNVLKV---SSAKGAKKQFS 148
>gi|1914797|emb|CAA84991.1| RPS18B [Saccharomyces cerevisiae]
Length = 141
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/123 (65%), Positives = 101/123 (82%), Gaps = 2/123 (1%)
Query: 19 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
R++K+ GLGFKTP+ AIEG+YIDKKCPFTG VSIRG+IL GT S KM+RTI++RR YLH
Sbjct: 18 RWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTKMHRTIVIRRAYLH 77
Query: 79 FVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAK 138
++ KY RYEKRH N+P H+SP FRV+ GD V +GQCRP+SKTVRFNV+KV + ++G A
Sbjct: 78 YIPKYNRYEKRHKNVPVHVSPAFRVQVGDIVTVGQCRPISKTVRFNVVKV--SAAAGKAN 135
Query: 139 KAF 141
K F
Sbjct: 136 KQF 138
>gi|1813337|dbj|BAA19165.1| ribosomal protein S11 homolog [Schizosaccharomyces pombe]
Length = 139
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 80/114 (70%), Positives = 93/114 (81%)
Query: 16 GGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRN 75
G R++K +GLGFKTP EAI G Y+DKKCPF G VSIRGRIL GT S KM+RTII+RR
Sbjct: 14 AGRRWYKDVGLGFKTPAEAIYGEYVDKKCPFVGQVSIRGRILTGTVVSTKMHRTIIIRRE 73
Query: 76 YLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
YLHF+ KY RYEKRH N+ AH+SP FR+ EGD V +GQCRPLSKTVRFNVL+V+
Sbjct: 74 YLHFIPKYNRYEKRHKNLAAHVSPAFRINEGDVVTVGQCRPLSKTVRFNVLRVV 127
>gi|188572476|gb|ACD65144.1| putative 40S ribosomal protein RPS11 [Phoronis muelleri]
Length = 155
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/155 (59%), Positives = 108/155 (69%), Gaps = 17/155 (10%)
Query: 1 MAEQTEKAFLKQP------------GKGGN-RFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MA+Q E+AF KQP GK R+ KS+GLG KTPREAI+G YIDKKCPFT
Sbjct: 1 MADQNERAFQKQPTVFLNKKRTLLSGKSKQLRYHKSVGLGIKTPREAIDGNYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
G VSIRGRIL G KM RTI++RR+YL ++KKY R+EKRH NI AH+SP FR VK G
Sbjct: 61 GNVSIRGRILTGVVTKMKMMRTIVIRRDYLRYIKKYNRFEKRHKNISAHLSPAFRDVKPG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
D V +G+CRPLSKTV+FNV+KV G KK F
Sbjct: 121 DVVTVGECRPLSKTVKFNVIKVTKG---QGNKKGF 152
>gi|357627868|gb|EHJ77408.1| 40S ribosomal protein S11 [Danaus plexippus]
Length = 195
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/136 (66%), Positives = 103/136 (75%), Gaps = 11/136 (8%)
Query: 4 QTEKAFLKQPG-----KGG-----NRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIR 53
+TEKAF KQ KGG R K++GLGFKTPREAIEGTYIDKKCPFTG VSIR
Sbjct: 47 ETEKAFQKQATVFLNRKGGLKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIR 106
Query: 54 GRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIG 112
GRIL G KM RTI++RR+YLH++ KY R+EKRH N+ H+SPCFR V+ GD V IG
Sbjct: 107 GRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVELGDIVTIG 166
Query: 113 QCRPLSKTVRFNVLKV 128
+CRPLSKTVRFNVLKV
Sbjct: 167 ECRPLSKTVRFNVLKV 182
>gi|440897555|gb|ELR49212.1| 40S ribosomal protein S11 [Bos grunniens mutus]
Length = 158
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/158 (57%), Positives = 112/158 (70%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQPGKGGN---------------RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP N R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLRETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EK H N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKCHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CRPLSKTV FN+LKV A G KK F
Sbjct: 121 QIGDIVTVGECRPLSKTVGFNILKVTKA---AGTKKQF 155
>gi|350999346|gb|AEQ38218.1| 40S ribosomal protein [Cyprinus carpio]
Length = 150
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 106/142 (74%), Gaps = 7/142 (4%)
Query: 4 QTEKAFLKQPGKGGN---RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGT 60
Q +K L G G R+ +++GLGFKTPREAI+GTYIDKKCPFTG VSIRGRIL+G
Sbjct: 9 QNKKRVLAVEGSGKEKLPRYHRNVGLGFKTPREAIQGTYIDKKCPFTGNVSIRGRILSGV 68
Query: 61 CHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSK 119
KM +TI++RR+YLH+++KY R+EKRH N+ H+SPCFR V GD V +G+CRPLSK
Sbjct: 69 VTKMKMQKTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVTLGDIVTVGECRPLSK 128
Query: 120 TVRFNVLKVIPAGSSGGAKKAF 141
TVRFNVLKV A GAKK F
Sbjct: 129 TVRFNVLKVTKA---AGAKKQF 147
>gi|320165580|gb|EFW42479.1| ribosomal protein S11 [Capsaspora owczarzaki ATCC 30864]
Length = 158
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/155 (61%), Positives = 110/155 (70%), Gaps = 15/155 (9%)
Query: 3 EQTEKAFLKQPGKGG--------------NRFWKSIGLGFKTPREAIEGTYIDKKCPFTG 48
EQTEKAF KQP G RFW+++GLG KTPREAIEG Y+DKKCPFTG
Sbjct: 2 EQTEKAFQKQPTIFGAKKRVLVQKISQREGRFWRNVGLGIKTPREAIEGNYVDKKCPFTG 61
Query: 49 TVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGD 107
VSIRGRIL G + KM RTI VRR+YLH++KKY R+EKRH N+ AHISP F+ V GD
Sbjct: 62 DVSIRGRILTGVIANNKMKRTITVRRDYLHYIKKYNRFEKRHRNLSAHISPAFKDVDVGD 121
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
V++GQCRPLSKTVRFNVLKVI + AKK F
Sbjct: 122 SVVVGQCRPLSKTVRFNVLKVIKDLKAEKAKKQFN 156
>gi|156084994|ref|XP_001609980.1| 40S ribosomal protein S11 [Babesia bovis T2Bo]
gi|154797232|gb|EDO06412.1| 40S ribosomal protein S11, putative [Babesia bovis]
Length = 156
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/147 (59%), Positives = 103/147 (70%), Gaps = 9/147 (6%)
Query: 4 QTEKAFLKQPGKG---------GNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRG 54
Q KA+ KQP +R++K +G+GF+TP+EA EGTYIDKKCPFTG VSIRG
Sbjct: 7 QVHKAYQKQPNVSVLKFQKLGRKSRYYKDVGMGFETPKEAKEGTYIDKKCPFTGNVSIRG 66
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 114
RI+ G SAKM RTII+R +YLH+VKKY R+EKRH NIP H SPCF GD V +GQC
Sbjct: 67 RIIKGMVLSAKMKRTIIMRVSYLHYVKKYNRFEKRHRNIPCHCSPCFEPTAGDIVTVGQC 126
Query: 115 RPLSKTVRFNVLKVIPAGSSGGAKKAF 141
RPLSKTVRFNVLKV G +K F
Sbjct: 127 RPLSKTVRFNVLKVEKNQIFGNPRKQF 153
>gi|389742334|gb|EIM83521.1| 40S ribosomal protein S11 [Stereum hirsutum FP-91666 SS1]
Length = 154
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/150 (56%), Positives = 104/150 (69%), Gaps = 13/150 (8%)
Query: 1 MAEQTEKAFLKQ-------------PGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MAEQ EKA+ KQ R++K +GLGFKTP EA+ GTYIDKKCPF
Sbjct: 1 MAEQIEKAYQKQHLFQNTKARVGRKVTTKDKRWYKDVGLGFKTPAEAVSGTYIDKKCPFI 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
G VSIRGRIL G S KM RT+++RR+YLH++ KY RYEKRH N+ AH+SP FR + GD
Sbjct: 61 GDVSIRGRILTGRVVSTKMTRTLVIRRDYLHYIPKYNRYEKRHRNLAAHVSPAFRAEVGD 120
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGA 137
V +GQCRPLSKTVRFNV++V+ ++ A
Sbjct: 121 IVTVGQCRPLSKTVRFNVVRVLKNKAAARA 150
>gi|313233630|emb|CBY09801.1| unnamed protein product [Oikopleura dioica]
Length = 153
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 88/150 (58%), Positives = 105/150 (70%), Gaps = 12/150 (8%)
Query: 2 AEQTEKAFLKQPG---------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSI 52
+Q EKA+ KQ K R+ KS+GLGFKTPREA EG YIDKKCPFTG V+I
Sbjct: 3 VQQVEKAYQKQSAVVYNAKKGSKAKKRYVKSVGLGFKTPREASEGAYIDKKCPFTGNVTI 62
Query: 53 RGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVII 111
RGR+ G KM RTII+RR+YLHFVKKY R+E+RH+N+ H+SPCFR V+ GD V +
Sbjct: 63 RGRVFTGVVRKMKMQRTIIIRRDYLHFVKKYGRFERRHTNMAVHLSPCFRDVEAGDIVTV 122
Query: 112 GQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
G+CRPLSKTVRFNV+K G AKK F
Sbjct: 123 GECRPLSKTVRFNVVK--HTKPPGAAKKQF 150
>gi|358059716|dbj|GAA94485.1| hypothetical protein E5Q_01137 [Mixia osmundae IAM 14324]
Length = 155
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/153 (56%), Positives = 105/153 (68%), Gaps = 16/153 (10%)
Query: 2 AEQTEKAFLKQP-------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTG 48
A Q +KAF KQP R++K +GLGFKTP+EAI GTYIDKKCP+TG
Sbjct: 3 AAQDQKAFQKQPIFNNAKVKTTKKASSKAKRWYKDVGLGFKTPQEAINGTYIDKKCPWTG 62
Query: 49 TVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDH 108
+VS+RGRIL+G KM RTI+VR NYLHF+ KY RYEKRH+NIP H SP FRV+ GD
Sbjct: 63 SVSVRGRILSGEVIKTKMTRTIVVRMNYLHFIPKYSRYEKRHTNIPVHCSPAFRVEIGDT 122
Query: 109 VIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V +G+ RP+SKTVRF VL+V + A KAF
Sbjct: 123 VTVGETRPISKTVRFTVLRV---SKNKAAAKAF 152
>gi|70909521|emb|CAJ17184.1| ribosomal protein S11e [Sphaerius sp. APV-2005]
Length = 152
Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 88/152 (57%), Positives = 107/152 (70%), Gaps = 11/152 (7%)
Query: 1 MAEQTEKAFLKQPG----------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
MA+QTEKAF KQP K R +++GLGFKTPREAI+GTYIDKKCPFTG V
Sbjct: 1 MADQTEKAFQKQPTVNYNRKSGLKKKSTRLHRNVGLGFKTPREAIDGTYIDKKCPFTGNV 60
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
SIRGRIL G KM RTI++RR+YLH+++KY R+ + N+ H+SPCFR V+ GD V
Sbjct: 61 SIRGRILTGVVQKMKMQRTIVIRRDYLHYIRKYNRFGEPAQNMSVHLSPCFRDVEIGDVV 120
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+G+CRPLSK VRFNVLKV SS + K F
Sbjct: 121 QVGECRPLSKPVRFNVLKVSKGTSSKKSFKKF 152
>gi|92111517|gb|ABE73519.1| ribosomal protein S11 [Marmota monax]
Length = 142
Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 108/142 (76%), Gaps = 17/142 (11%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+ G R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGAVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNV 125
+ GD V +G+CRPLSKTVRFNV
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNV 142
>gi|403221877|dbj|BAM40009.1| 40S ribosomal protein S11 [Theileria orientalis strain Shintoku]
Length = 156
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 87/148 (58%), Positives = 102/148 (68%), Gaps = 11/148 (7%)
Query: 4 QTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIR 53
Q KAF KQP GK R+WK +G+GF TP+EA EG Y+DKKCPFTG VSIR
Sbjct: 7 QVHKAFQKQPTVSVKKLQKLGKRA-RYWKDVGMGFVTPKEAKEGHYVDKKCPFTGNVSIR 65
Query: 54 GRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQ 113
GR+L G S KM T+++R +YLH+V KY R+EKRH NIPAH+SPCF V GD V +GQ
Sbjct: 66 GRVLKGMVLSHKMKNTLVMRVSYLHYVPKYNRFEKRHKNIPAHVSPCFTVSAGDIVTVGQ 125
Query: 114 CRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
CRPLSKTVRFNVLKV G +K F
Sbjct: 126 CRPLSKTVRFNVLKVEKNEIFGNPRKQF 153
>gi|260826898|ref|XP_002608402.1| hypothetical protein BRAFLDRAFT_282619 [Branchiostoma floridae]
gi|229293753|gb|EEN64412.1| hypothetical protein BRAFLDRAFT_282619 [Branchiostoma floridae]
Length = 158
Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 89/155 (57%), Positives = 108/155 (69%), Gaps = 18/155 (11%)
Query: 2 AEQTEKAFLKQPG--------------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
A QTE+AF KQP K R+ +++GLGFKTPREAI+GTYIDKKCPFT
Sbjct: 4 AAQTERAFQKQPTIFLNKKRVLGSKIKKKDMRYVRNVGLGFKTPREAIDGTYIDKKCPFT 63
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
G VSIRGRIL G KM RT ++RR++LH+VKKY R+EKRH N+ H+SP FR V G
Sbjct: 64 GNVSIRGRILTGIVVKLKMQRTCVIRRDFLHYVKKYNRFEKRHKNVSVHLSPAFRDVALG 123
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
D V +G+CRPLSKTVRFNVLKV G++K+F
Sbjct: 124 DVVTVGECRPLSKTVRFNVLKVT---KRQGSQKSF 155
>gi|440297072|gb|ELP89802.1| 40S ribosomal protein S11, putative [Entamoeba invadens IP1]
Length = 156
Score = 174 bits (442), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 94/155 (60%), Positives = 107/155 (69%), Gaps = 16/155 (10%)
Query: 1 MAEQTEKAFLK-------QPGKG------GNRFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MAEQTE+AF K + KG R++K+IGLGF TP EAI GTYID KCPFT
Sbjct: 1 MAEQTERAFQKPFHEYHNRDAKGRIDFNSTKRWYKNIGLGFVTPDEAINGTYIDNKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
+SIRGRIL+G S KM RTIIVRR+Y H++ KY RYEKRH NI H SP FR +KEG
Sbjct: 61 SKISIRGRILSGIVKSCKMKRTIIVRRDYFHYIPKYNRYEKRHRNIAVHCSPAFRQLKEG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
D V+ GQCRPLSKTVRFNVLK GS+ KK F
Sbjct: 121 DFVVFGQCRPLSKTVRFNVLKYTSRGSAD--KKQF 153
>gi|367006745|ref|XP_003688103.1| 40S ribosomal protein S11 [Tetrapisispora phaffii CBS 4417]
gi|357526410|emb|CCE65669.1| hypothetical protein TPHA_0M00940 [Tetrapisispora phaffii CBS 4417]
Length = 155
Score = 174 bits (442), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 83/136 (61%), Positives = 102/136 (75%), Gaps = 10/136 (7%)
Query: 1 MAEQTEKAFLKQPGKGGN----------RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q+E+AF KQP N R++K++GLGFKTP+ AIEGTYIDKKCPF G V
Sbjct: 5 LTVQSERAFQKQPHIFTNPKFKTSRRTKRWYKNVGLGFKTPKTAIEGTYIDKKCPFVGMV 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRG+IL GT S KM+RTI++RR+YLH+V KY R+EKRH N+ H+SP FRV+ GD V
Sbjct: 65 SIRGKILTGTVVSTKMHRTIVIRRDYLHYVPKYNRFEKRHKNVSVHVSPAFRVEVGDIVT 124
Query: 111 IGQCRPLSKTVRFNVL 126
GQCRP+SKTVRFNVL
Sbjct: 125 AGQCRPISKTVRFNVL 140
>gi|209882991|ref|XP_002142929.1| 40S ribosomal protein S11 [Cryptosporidium muris RN66]
gi|209558535|gb|EEA08580.1| 40S ribosomal protein S11, putative [Cryptosporidium muris RN66]
Length = 168
Score = 174 bits (442), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 92/152 (60%), Positives = 101/152 (66%), Gaps = 14/152 (9%)
Query: 4 QTEKAFLKQP----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKCPFTGT 49
QTE+AF KQ K N R++K GLGF P EA +G YIDKKCPFTG
Sbjct: 14 QTERAFQKQETIFIGAKRLLSKKSNSKIPRYFKDPGLGFTVPAEAKDGIYIDKKCPFTGN 73
Query: 50 VSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHV 109
VSIRGRIL G C S KM RTI+VRRNYL +V KY R+EKRH NI H SPCF VKEGD +
Sbjct: 74 VSIRGRILKGMCISTKMKRTIVVRRNYLKYVPKYNRFEKRHKNISVHCSPCFDVKEGDII 133
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GQCRPLSKTVRFNVLKV G A+K F
Sbjct: 134 TFGQCRPLSKTVRFNVLKVEKNQIFGTARKQF 165
>gi|339236095|ref|XP_003379602.1| 40S ribosomal protein S11 [Trichinella spiralis]
gi|316977729|gb|EFV60796.1| 40S ribosomal protein S11 [Trichinella spiralis]
Length = 328
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/156 (58%), Positives = 109/156 (69%), Gaps = 20/156 (12%)
Query: 3 EQTEKAFLKQP----------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
+QTE++F KQP K R+ ++IGLGFKTP+ A EG YIDKKCPF
Sbjct: 6 DQTERSFQKQPHVFLNRKTITAVGKKKSKKPLRWVRNIGLGFKTPQLAKEGNYIDKKCPF 65
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKE 105
TG VSIRGRIL G KM RTI++RR+YLH+VKKY R+EKRH N+ H+SPCFR VK
Sbjct: 66 TGNVSIRGRILTGVVMKMKMQRTIVIRRDYLHYVKKYARFEKRHKNMSVHLSPCFRDVKV 125
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V +G+CRPLSKTVRFNV+KV A G+KKAF
Sbjct: 126 GDIVTVGECRPLSKTVRFNVIKVTKA---PGSKKAF 158
>gi|71411518|ref|XP_808004.1| 40S ribosomal protein S11 [Trypanosoma cruzi strain CL Brener]
gi|71415083|ref|XP_809620.1| 40S ribosomal protein S11 [Trypanosoma cruzi strain CL Brener]
gi|70872121|gb|EAN86153.1| 40S ribosomal protein S11, putative [Trypanosoma cruzi]
gi|70874031|gb|EAN87769.1| 40S ribosomal protein S11, putative [Trypanosoma cruzi]
Length = 173
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 107/157 (68%), Gaps = 15/157 (9%)
Query: 1 MAEQTEKAFLKQ---------PGK------GGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q EKA+ +Q P K G R+ K IGLGFKTP+ AI G YID+KCP
Sbjct: 15 LTLQHEKAYQRQTAVNENSHNPNKKHVNMSGHIRYSKKIGLGFKTPKSAINGKYIDRKCP 74
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FT VSIRGRIL G HS KM R+I++RR+YLHF++KYQRY+KRH ++ H SPCF K
Sbjct: 75 FTSDVSIRGRILRGVVHSTKMKRSIVIRRDYLHFIRKYQRYQKRHRSLTVHCSPCFDPKP 134
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD VI+GQCRPLSKT+R+NVL+V+ + G + F+
Sbjct: 135 GDEVIVGQCRPLSKTIRYNVLEVVSKSAPGKLGRKFS 171
>gi|290979182|ref|XP_002672313.1| 40S ribosomal protein [Naegleria gruberi]
gi|284085889|gb|EFC39569.1| 40S ribosomal protein [Naegleria gruberi]
Length = 166
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 96/123 (78%), Gaps = 4/123 (3%)
Query: 19 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
RF+K+IGLGF TP+ AI+G YIDKKCPFTG VSIRGRIL G S KM RT+IVRR+YL
Sbjct: 45 RFFKNIGLGFSTPKTAIQGQYIDKKCPFTGNVSIRGRILRGVVKSHKMARTLIVRRDYLK 104
Query: 79 FVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAK 138
+ KKY RYEKRH N+ AHISP F EGD V+IG+CRPLSKTVRFNV+KV GS K
Sbjct: 105 YEKKYNRYEKRHKNVAAHISPAFEAHEGDVVVIGECRPLSKTVRFNVVKVEKKGS----K 160
Query: 139 KAF 141
K+F
Sbjct: 161 KSF 163
>gi|71403962|ref|XP_804730.1| 40S ribosomal protein S11 [Trypanosoma cruzi strain CL Brener]
gi|70867848|gb|EAN82879.1| 40S ribosomal protein S11, putative [Trypanosoma cruzi]
Length = 173
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 107/157 (68%), Gaps = 15/157 (9%)
Query: 1 MAEQTEKAFLKQ---------PGK------GGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q EKA+ +Q P K G R+ K IGLGFKTP+ AI G YID+KCP
Sbjct: 15 LTLQHEKAYQRQTAVNENSHNPNKKHVNMSGHIRYSKKIGLGFKTPKAAINGKYIDRKCP 74
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FT VSIRGRIL G HS KM R+I++RR+YLHF++KYQRY+KRH ++ H SPCF K
Sbjct: 75 FTSDVSIRGRILRGVVHSTKMKRSIVIRRDYLHFIRKYQRYQKRHRSLTVHCSPCFDPKP 134
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD VI+GQCRPLSKT+R+NVL+V+ + G + F+
Sbjct: 135 GDEVIVGQCRPLSKTIRYNVLEVVSKSAPGKLGRKFS 171
>gi|390358152|ref|XP_784254.2| PREDICTED: 40S ribosomal protein S11-like isoform 2
[Strongylocentrotus purpuratus]
Length = 194
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/150 (58%), Positives = 103/150 (68%), Gaps = 15/150 (10%)
Query: 5 TEKAFLKQP------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSI 52
+E+AF KQP K NR +++GLGFKTP EA +G YIDKKCPFTG V I
Sbjct: 44 SERAFQKQPTVFQNNKRLLASNKKANRLVRNVGLGFKTPAEARDGHYIDKKCPFTGNVHI 103
Query: 53 RGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVII 111
RGRIL G KM RTI++RR+YLH++KKY R+EKRH + H+SPCFR K GD V +
Sbjct: 104 RGRILTGVITKMKMQRTIVIRRDYLHYIKKYNRFEKRHKTMSVHLSPCFRDTKTGDIVTV 163
Query: 112 GQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
G+CRPLSKTVRFNVLKV A G AKK F
Sbjct: 164 GECRPLSKTVRFNVLKVTQA--PGSAKKQF 191
>gi|71414429|ref|XP_809317.1| 40S ribosomal protein S11 [Trypanosoma cruzi strain CL Brener]
gi|70873680|gb|EAN87466.1| 40S ribosomal protein S11, putative [Trypanosoma cruzi]
Length = 176
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 107/157 (68%), Gaps = 15/157 (9%)
Query: 1 MAEQTEKAFLKQ---------PGK------GGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q EKA+ +Q P K G R+ K IGLGFKTP+ AI G YID+KCP
Sbjct: 18 LTLQHEKAYQRQTAVNENSHNPNKKHVNMSGHIRYSKKIGLGFKTPKAAINGKYIDRKCP 77
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FT VSIRGRIL G HS KM R+I++RR+YLHF++KYQRY+KRH ++ H SPCF K
Sbjct: 78 FTSDVSIRGRILRGVVHSTKMKRSIVIRRDYLHFIRKYQRYQKRHRSLTVHCSPCFDPKP 137
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD VI+GQCRPLSKT+R+NVL+V+ + G + F+
Sbjct: 138 GDEVIVGQCRPLSKTIRYNVLEVVSKSAPGKLGRKFS 174
>gi|389603968|ref|XP_003723129.1| ribosomal protein S11 homolog [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504871|emb|CBZ14658.1| ribosomal protein S11 homolog [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 173
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 102/140 (72%), Gaps = 1/140 (0%)
Query: 3 EQTEKAFLKQPGKGGN-RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTC 61
E ++ K K G+ R+ K IGLGFKTP +A+ G YID+KCPFT V IRGRIL G
Sbjct: 31 ENMHRSSRKHVNKSGHIRYAKKIGLGFKTPAKALNGKYIDRKCPFTSNVVIRGRILRGIV 90
Query: 62 HSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTV 121
HS KM+RTII+RRNYLHF+KKYQRY+KRH ++ H SP F K+GD V++GQCRPLSKT+
Sbjct: 91 HSTKMHRTIIIRRNYLHFIKKYQRYQKRHKSLAVHCSPAFDPKQGDEVVVGQCRPLSKTI 150
Query: 122 RFNVLKVIPAGSSGGAKKAF 141
R+NVL+V+ ++ K F
Sbjct: 151 RYNVLEVVSKSAADKLGKKF 170
>gi|427783555|gb|JAA57229.1| Putative 40s ribosomal protein s11 [Rhipicephalus pulchellus]
Length = 158
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/125 (67%), Positives = 98/125 (78%), Gaps = 4/125 (3%)
Query: 18 NRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYL 77
R++KS+GLGFKTPREAI GTYIDKKCPFTG VSIRGRIL G KM RTI++RR+YL
Sbjct: 34 QRYYKSVGLGFKTPREAIHGTYIDKKCPFTGNVSIRGRILRGVVVKMKMQRTIVIRRDYL 93
Query: 78 HFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGG 136
H+V+KY R+EKRH N+ H+SP FR V GD V +G+CRPLSKTVRFNVLKV A G
Sbjct: 94 HYVRKYNRFEKRHRNMSVHLSPAFRDVAVGDVVTVGECRPLSKTVRFNVLKVTKA---AG 150
Query: 137 AKKAF 141
+KK F
Sbjct: 151 SKKQF 155
>gi|67043838|gb|AAY64013.1| ribosomal protein S11 [Pelodiscus sinensis]
Length = 158
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/158 (57%), Positives = 112/158 (70%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ TE+A+ KQP G+ G R++K IGLGFKTP+ AIEGTYIDKKC
Sbjct: 1 MADIHTERAYQKQPTIFENKKRVLLGETGKEKLPRYYKKIGLGFKTPKVAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PF G VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFPGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMCVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CRPL+KTVRFNVLKV A G KK F
Sbjct: 121 QIGDIVTVGECRPLTKTVRFNVLKVTKA---AGTKKQF 155
>gi|440898009|gb|ELR49591.1| hypothetical protein M91_17544, partial [Bos grunniens mutus]
Length = 154
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/154 (59%), Positives = 111/154 (72%), Gaps = 20/154 (12%)
Query: 5 TEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPRE-AIEGTYIDKKCPFTG 48
TE+A+ KQP G+ G R++K+IGLGFKTP+E AIEGTYIDKKCPFTG
Sbjct: 1 TERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEEAIEGTYIDKKCPFTG 60
Query: 49 TVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGD 107
VSIRGRIL+G KM RTI++RR+YLH+++KY R+EK H N+ H+SPCFR V+ GD
Sbjct: 61 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKCHKNMSVHLSPCFRDVQIGD 120
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 IVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 151
>gi|302665112|ref|XP_003024169.1| hypothetical protein TRV_01668 [Trichophyton verrucosum HKI 0517]
gi|291188214|gb|EFE43558.1| hypothetical protein TRV_01668 [Trichophyton verrucosum HKI 0517]
Length = 196
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 114/191 (59%), Gaps = 52/191 (27%)
Query: 1 MAEQTEKAFLKQPGKGGN---------------RFWKSIGLGFKTPREAIEGTYI----- 40
+ Q+E+AF+KQP N R++K +GLGF+TP+ AIEG YI
Sbjct: 5 LTVQSERAFMKQPHIFTNSKVKSKSKSVGKGGRRWYKDVGLGFRTPKTAIEGNYIAPVLC 64
Query: 41 ------------------------------DKKCPFTGTVSIRGRILAGTCHSAKMNRTI 70
DKKCPFTG VSIRGRIL GT S KM+RT+
Sbjct: 65 HLGNTPIRITTKDVLGLEDWKSILTSLFFIDKKCPFTGQVSIRGRILTGTVVSTKMHRTL 124
Query: 71 IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIP 130
++RR YLH++ KY RYEKRH N+ AH+SP FRV+EGD V +GQCRPLSKTVRFNVL+V+P
Sbjct: 125 VIRREYLHYIPKYSRYEKRHKNLAAHVSPAFRVEEGDQVTVGQCRPLSKTVRFNVLRVLP 184
Query: 131 AGSSGGAKKAF 141
+G A KAF
Sbjct: 185 --RTGKAVKAF 193
>gi|194754161|ref|XP_001959365.1| GF12077 [Drosophila ananassae]
gi|190620663|gb|EDV36187.1| GF12077 [Drosophila ananassae]
Length = 196
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/152 (58%), Positives = 107/152 (70%), Gaps = 17/152 (11%)
Query: 4 QTEKAFLKQPGKGGNR-------------FWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ E+AF KQ G NR ++ +GLGFKTPREAI+GTYIDKKCP+TG V
Sbjct: 45 ENERAFQKQFGVNLNRKVKPGITKKKVLRRYRDVGLGFKTPREAIDGTYIDKKCPWTGDV 104
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V++GD V
Sbjct: 105 RIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEQGDIV 164
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IG+CRPLSKTVRFNVLKV G+KK+F
Sbjct: 165 TIGECRPLSKTVRFNVLKV---SKGQGSKKSF 193
>gi|154337274|ref|XP_001564870.1| putative 40S ribosomal protein S11 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061908|emb|CAM38948.1| putative 40S ribosomal protein S11 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 173
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 101/140 (72%), Gaps = 1/140 (0%)
Query: 3 EQTEKAFLKQPGKGGN-RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTC 61
E + K K G+ R+ K IGLGFKTP +A+ G YID+KCPFT V IRGRIL G
Sbjct: 31 ENMHRPSPKHVNKSGHIRYAKKIGLGFKTPAKALNGKYIDRKCPFTSNVVIRGRILRGIV 90
Query: 62 HSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTV 121
HS KM+RTII+RRNYLHF+KKYQRY+KRH ++ H SP F K+GD V++GQCRPLSKT+
Sbjct: 91 HSTKMHRTIIIRRNYLHFIKKYQRYQKRHKSLAVHCSPAFDPKQGDEVVVGQCRPLSKTI 150
Query: 122 RFNVLKVIPAGSSGGAKKAF 141
R+NVL+V+ S+ K F
Sbjct: 151 RYNVLEVVSKSSADKMGKKF 170
>gi|342906148|gb|AEL79357.1| 40S ribosomal protein S11 [Rhodnius prolixus]
Length = 137
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/129 (65%), Positives = 98/129 (75%), Gaps = 10/129 (7%)
Query: 1 MAEQTEKAFLKQP---------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVS 51
MA+QTEKAF KQP K R +KS+GLGFKTPREAIEGTYIDKKCPFTG VS
Sbjct: 9 MADQTEKAFQKQPHVFLASKVSTKRPLRRYKSVGLGFKTPREAIEGTYIDKKCPFTGNVS 68
Query: 52 IRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVI 110
IRGRIL G KM RTI++RR+YLH+V+KY R+EKRH N+ H+SPCFR V+ GD V
Sbjct: 69 IRGRILTGVVQKMKMQRTIVIRRDYLHYVRKYNRFEKRHKNMSVHLSPCFRDVEIGDVVT 128
Query: 111 IGQCRPLSK 119
+G+CRPLSK
Sbjct: 129 VGECRPLSK 137
>gi|261331980|emb|CBH14973.1| 40S ribosomal proteins S11, putative [Trypanosoma brucei gambiense
DAL972]
Length = 174
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 103/157 (65%), Gaps = 15/157 (9%)
Query: 1 MAEQTEKAFLKQPGKGGN---------------RFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q EKA+ +Q N R+ K IGLGF TP+ AI G YID+KCP
Sbjct: 16 LTVQHEKAYQRQTAVNENIRTASKKHVNRSGHIRYSKKIGLGFATPKAAINGKYIDRKCP 75
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FT VSIRGRIL G HS KM +I++RRNYLHF++KYQRY+KRH NI H SPCF K
Sbjct: 76 FTSNVSIRGRILRGVVHSTKMRCSIVIRRNYLHFIRKYQRYQKRHRNITVHCSPCFDPKP 135
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD V++GQCRPLSKT+R+NVL+V+ ++ K F+
Sbjct: 136 GDEVVVGQCRPLSKTIRYNVLQVVSKSAADKMGKKFS 172
>gi|384490939|gb|EIE82135.1| 40S ribosomal protein [Rhizopus delemar RA 99-880]
Length = 153
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/154 (58%), Positives = 105/154 (68%), Gaps = 15/154 (9%)
Query: 1 MAEQTEKAFLKQPG---------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVS 51
M QTEKAF KQ G K R++K +G GFKTP+EA GTYIDKKCPF G V+
Sbjct: 1 MEHQTEKAFQKQAGIFQNSKDAKKRNQRWFKEVGNGFKTPKEAKVGTYIDKKCPFVGEVN 60
Query: 52 IRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR---VKEGDH 108
I+GRIL G S KM RT++VRR+YLH++ KY RYEKRH NI AH+SP F ++ GD
Sbjct: 61 IQGRILTGVVVSTKMKRTLVVRRDYLHYIPKYNRYEKRHKNISAHVSPAFDNQAIQTGDL 120
Query: 109 VIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
V IGQCRPLSKTVRFNV+KV A G KAF
Sbjct: 121 VTIGQCRPLSKTVRFNVIKVSKA---KGTSKAFN 151
>gi|24652924|ref|NP_725115.1| ribosomal protein S11, isoform B [Drosophila melanogaster]
gi|21645481|gb|AAM71029.1| ribosomal protein S11, isoform B [Drosophila melanogaster]
Length = 154
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 89/151 (58%), Positives = 106/151 (70%), Gaps = 15/151 (9%)
Query: 3 EQTEKAFLKQPG-----------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVS 51
+QTE++F KQ K RF++ IGLGF+ P EAI+GTYIDKKCP+TG V
Sbjct: 4 QQTERSFRKQHAVVVVRRKSPNLKKRPRFYRQIGLGFRAPAEAIDGTYIDKKCPWTGDVR 63
Query: 52 IRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVI 110
IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V
Sbjct: 64 IRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVT 123
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 124 IGECRPLSKTVRFNVLKV---SKGQGAKKSF 151
>gi|384484993|gb|EIE77173.1| RPYS18 protein [Rhizopus delemar RA 99-880]
Length = 153
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/154 (58%), Positives = 105/154 (68%), Gaps = 15/154 (9%)
Query: 1 MAEQTEKAFLKQPG---------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVS 51
M QTEKAF KQ G K R++K +G GFKTP+EA GTYIDKKCPF G V+
Sbjct: 1 MEHQTEKAFQKQAGIFQNSKDAKKRNQRWFKEVGNGFKTPKEAKVGTYIDKKCPFVGEVN 60
Query: 52 IRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR---VKEGDH 108
I+GRIL G S KM RT++VRR+YLH++ KY RYEKRH NI AH+SP F ++ GD
Sbjct: 61 IQGRILTGVVVSTKMKRTLVVRRDYLHYIPKYNRYEKRHKNISAHVSPAFDNQAIQVGDM 120
Query: 109 VIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
V IGQCRPLSKTVRFNV+KV A G KAF
Sbjct: 121 VTIGQCRPLSKTVRFNVIKVSKA---KGTAKAFN 151
>gi|440291459|gb|ELP84728.1| 40S ribosomal protein S11, putative [Entamoeba invadens IP1]
Length = 156
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/156 (59%), Positives = 106/156 (67%), Gaps = 16/156 (10%)
Query: 1 MAEQTEKAFLK-------QPGKG------GNRFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MAEQTE+AF K + KG R++K+IGLGF TP EAI G YID KCPFT
Sbjct: 1 MAEQTERAFQKPFHEYHNRDAKGRIDYNSPKRWYKNIGLGFVTPDEAINGNYIDNKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
+SIRGRIL+G S KM RTIIVRR+Y H++ KY RYEKRH NI H SP FR +KEG
Sbjct: 61 SKISIRGRILSGIVKSCKMKRTIIVRRDYFHYIPKYNRYEKRHRNIAVHCSPAFRQLKEG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
D V+ GQCRPLSKTVRFNVLK GS+ KK F
Sbjct: 121 DFVVFGQCRPLSKTVRFNVLKYTSRGSAD--KKQFA 154
>gi|238637978|gb|ACR53999.1| RH04493p [Drosophila melanogaster]
Length = 160
Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 89/151 (58%), Positives = 106/151 (70%), Gaps = 15/151 (9%)
Query: 3 EQTEKAFLKQPG-----------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVS 51
+QTE++F KQ K RF++ IGLGF+ P EAI+GTYIDKKCP+TG V
Sbjct: 10 QQTERSFRKQHAVVVVRRKSPNLKKRPRFYRQIGLGFRAPAEAIDGTYIDKKCPWTGDVR 69
Query: 52 IRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVI 110
IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V
Sbjct: 70 IRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVT 129
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 130 IGECRPLSKTVRFNVLKV---SKGQGAKKSF 157
>gi|146085475|ref|XP_001465286.1| ribosomal protein S11 homolog [Leishmania infantum JPCM5]
gi|146086110|ref|XP_001465452.1| putative 40S ribosomal protein S11 [Leishmania infantum JPCM5]
gi|157868717|ref|XP_001682911.1| ribosomal protein S11 homolog [Leishmania major strain Friedlin]
gi|157869112|ref|XP_001683108.1| putative 40S ribosomal protein S11 [Leishmania major strain
Friedlin]
gi|13177633|gb|AAK14904.1| ribosomal protein S11 [Leishmania donovani]
gi|68126367|emb|CAJ04465.1| ribosomal protein S11 homolog [Leishmania major strain Friedlin]
gi|68223991|emb|CAJ04894.1| putative 40S ribosomal protein S11 [Leishmania major strain
Friedlin]
gi|134069383|emb|CAM67535.1| ribosomal protein S11 homolog [Leishmania infantum JPCM5]
gi|134069550|emb|CAM67873.1| putative 40S ribosomal protein S11 [Leishmania infantum JPCM5]
Length = 141
Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 79/127 (62%), Positives = 96/127 (75%)
Query: 16 GGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRN 75
G R+ K IGLGFKTP +A+ G YID+KCPFT V IRGRIL G HS KM+RTII+RRN
Sbjct: 13 GHIRYSKKIGLGFKTPAKALNGKYIDRKCPFTSNVVIRGRILRGVVHSTKMHRTIIIRRN 72
Query: 76 YLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSG 135
YLHF+KKYQRY+KRH ++ H SP F K+GD V+IGQCRPLSKT+R+NVL+V+ S+
Sbjct: 73 YLHFIKKYQRYQKRHKSLAVHCSPAFDPKQGDEVVIGQCRPLSKTIRYNVLEVVSKSSAD 132
Query: 136 GAKKAFT 142
K F
Sbjct: 133 KMGKKFA 139
>gi|422295434|gb|EKU22733.1| small subunit ribosomal protein S11e [Nannochloropsis gaditana
CCMP526]
Length = 176
Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/148 (59%), Positives = 105/148 (70%), Gaps = 18/148 (12%)
Query: 2 AEQTEKAFLKQPG-----------------KGGNRFWKSIGLGFKTPREAIEGTYIDKKC 44
A+Q EKA+ Q G K G R+ + +GLGFKTP+EA GTY+DKKC
Sbjct: 15 ADQHEKAYQVQKGVFMFGKSSSRKEGSKRSKHGARWTREVGLGFKTPKEAKAGTYVDKKC 74
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF-RV 103
PFTG+VSIRGRIL G S KMNRTII+RR+YLH+V KY R+EKRH N+ AH SP F +V
Sbjct: 75 PFTGSVSIRGRILKGIVLSTKMNRTIIIRRDYLHWVSKYSRFEKRHKNLAAHCSPAFPQV 134
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPA 131
KEGD V +GQCRPLSKTVRFNVL+ P+
Sbjct: 135 KEGDIVTVGQCRPLSKTVRFNVLQHEPS 162
>gi|379994247|gb|AFD22750.1| 40S ribosomal protein S11 [Collodictyon triciliatum]
Length = 168
Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/130 (65%), Positives = 94/130 (72%), Gaps = 14/130 (10%)
Query: 2 AEQTEKAFLKQP----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
EQ E+AF KQ GK R+ KSIGLGFKTPREAIEGTY+DKKCPFT
Sbjct: 5 VEQNERAFQKQETVFSGRKRLLGKAARQSQLRYSKSIGLGFKTPREAIEGTYVDKKCPFT 64
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
VSIRGRIL G S KM RTI VRR+YLH++KKY RYEKRHSN+ AH+SPCF VKEGD
Sbjct: 65 SNVSIRGRILRGVVLSTKMKRTITVRRDYLHYIKKYNRYEKRHSNLSAHVSPCFVVKEGD 124
Query: 108 HVIIGQCRPL 117
V +GQCRPL
Sbjct: 125 VVTVGQCRPL 134
>gi|390604379|gb|EIN13770.1| 40S ribosomal protein S11, partial [Punctularia strigosozonata
HHB-11173 SS5]
Length = 150
Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 88/147 (59%), Positives = 101/147 (68%), Gaps = 10/147 (6%)
Query: 2 AEQTEKAFLKQPGKGGN-------RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRG 54
A Q + F KGG R++K +GLGFK P EAI GTYIDKKCPFTG VSIRG
Sbjct: 4 AYQKQHLFQNAKVKGGKKVSTKEKRWYKDVGLGFKIPSEAITGTYIDKKCPFTGNVSIRG 63
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 114
RIL G S KM RTII+RR+YLH++ KY RYEKRH N+ H SP FRV+ GD V +GQC
Sbjct: 64 RILTGRVVSTKMTRTIIIRRDYLHYIPKYNRYEKRHKNLSVHCSPAFRVELGDIVTVGQC 123
Query: 115 RPLSKTVRFNVLKVIPAGSSGGAKKAF 141
RPLSKTVRFNVL+V + A KAF
Sbjct: 124 RPLSKTVRFNVLRV---SKNKAAAKAF 147
>gi|195333659|ref|XP_002033504.1| GM20375 [Drosophila sechellia]
gi|194125474|gb|EDW47517.1| GM20375 [Drosophila sechellia]
Length = 196
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 91/152 (59%), Positives = 105/152 (69%), Gaps = 17/152 (11%)
Query: 4 QTEKAFLKQPGKGGNRFWK-------------SIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ E+AF KQ G NR K +GLGFKTPREAI+GTYIDKKCP+TG V
Sbjct: 45 ENERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDV 104
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V
Sbjct: 105 RIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIV 164
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 165 TIGECRPLSKTVRFNVLKV---SKGQGAKKSF 193
>gi|195056622|ref|XP_001995133.1| GH22980 [Drosophila grimshawi]
gi|193899339|gb|EDV98205.1| GH22980 [Drosophila grimshawi]
Length = 196
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 89/152 (58%), Positives = 105/152 (69%), Gaps = 17/152 (11%)
Query: 4 QTEKAFLKQPGKGGNR-------------FWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ E+AF KQ G NR ++ +GLGFKTPREAI+GTYIDKKCP+TG V
Sbjct: 45 ENERAFQKQFGVNLNRKVKPGITKKKVLRRYRDVGLGFKTPREAIDGTYIDKKCPWTGDV 104
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
IRGRIL G KM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V
Sbjct: 105 RIRGRILTGVVRKTKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPAFRDVEHGDIV 164
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 165 TIGECRPLSKTVRFNVLKV---SKGQGAKKSF 193
>gi|401421460|ref|XP_003875219.1| ribosomal protein S11 homolog [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|401421845|ref|XP_003875411.1| putative 40S ribosomal protein S11 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491455|emb|CBZ26727.1| ribosomal protein S11 homolog [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491648|emb|CBZ26921.1| putative 40S ribosomal protein S11 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 141
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/127 (62%), Positives = 96/127 (75%)
Query: 16 GGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRN 75
G R+ K IGLGFKTP +A+ G YID+KCPFT V IRGRIL G HS KM+RTII+RRN
Sbjct: 13 GHIRYSKKIGLGFKTPAKALNGKYIDRKCPFTSNVVIRGRILRGIVHSTKMHRTIIIRRN 72
Query: 76 YLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSG 135
YLHF+KKYQRY+KRH ++ H SP F K+GD V+IGQCRPLSKT+R+NVL+V+ S+
Sbjct: 73 YLHFIKKYQRYQKRHKSLAVHCSPAFDPKQGDEVVIGQCRPLSKTIRYNVLEVVSKSSAD 132
Query: 136 GAKKAFT 142
K F
Sbjct: 133 KMGKKFA 139
>gi|312385066|gb|EFR29650.1| hypothetical protein AND_01218 [Anopheles darlingi]
Length = 167
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 110/168 (65%), Gaps = 29/168 (17%)
Query: 1 MAEQTEKAFLKQPG----------KGGNRFWKSIGLGFKTPRE---------------AI 35
MA+Q +AF KQ G K G R +SIGLGFKTP+E AI
Sbjct: 1 MADQNIRAFQKQLGINLNRKVVNKKRGLRIHRSIGLGFKTPKEVGTAGGAAPRMLTGSAI 60
Query: 36 EGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPA 95
G+YIDKKCPFTG +SIRGRIL G KM RTI++RR+YLHF++KY R+EKRH N+
Sbjct: 61 TGSYIDKKCPFTGHISIRGRILTGVVRKMKMQRTIVIRRDYLHFIRKYDRFEKRHKNVSV 120
Query: 96 HISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV G+KK F+
Sbjct: 121 HLSPCFRDVEAGDIVTVGECRPLSKTVRFNVLKV---SKMAGSKKKFS 165
>gi|332265690|ref|XP_003281849.1| PREDICTED: 40S ribosomal protein S11-like isoform 1 [Nomascus
leucogenys]
gi|441630441|ref|XP_004089548.1| PREDICTED: 40S ribosomal protein S11-like isoform 2 [Nomascus
leucogenys]
gi|441630444|ref|XP_004089549.1| PREDICTED: 40S ribosomal protein S11-like isoform 3 [Nomascus
leucogenys]
gi|441630449|ref|XP_004089550.1| PREDICTED: 40S ribosomal protein S11-like isoform 4 [Nomascus
leucogenys]
Length = 161
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 113/161 (70%), Gaps = 23/161 (14%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A KQP G+ G R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAHQKQPTIFQNKKRVLLGEAGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RT ++RR+YLH++ +Y R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGYVSIRGRILSGVVTEMKMQRTTVIRRDYLHYIHQYNRFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQ---CRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+ CRPLS+TVRFN+LKV A G KK F
Sbjct: 121 QIGDIVTVGERRLCRPLSRTVRFNMLKVTKA---AGTKKQF 158
>gi|194883750|ref|XP_001975964.1| GG22596 [Drosophila erecta]
gi|195485469|ref|XP_002091106.1| GE13464 [Drosophila yakuba]
gi|190659151|gb|EDV56364.1| GG22596 [Drosophila erecta]
gi|194177207|gb|EDW90818.1| GE13464 [Drosophila yakuba]
Length = 196
Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 91/152 (59%), Positives = 105/152 (69%), Gaps = 17/152 (11%)
Query: 4 QTEKAFLKQPGKGGNRFWK-------------SIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ E+AF KQ G NR K +GLGFKTPREAI+GTYIDKKCP+TG V
Sbjct: 45 ENERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDV 104
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V
Sbjct: 105 RIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIV 164
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 165 TIGECRPLSKTVRFNVLKV---SKGQGAKKSF 193
>gi|195551878|ref|XP_002076321.1| GD15239 [Drosophila simulans]
gi|194201970|gb|EDX15546.1| GD15239 [Drosophila simulans]
Length = 196
Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 91/152 (59%), Positives = 105/152 (69%), Gaps = 17/152 (11%)
Query: 4 QTEKAFLKQPGKGGNRFWK-------------SIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ E+AF KQ G NR K +GLGFKTPREAI+GTYIDKKCP+TG V
Sbjct: 45 ENERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDV 104
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V
Sbjct: 105 RIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIV 164
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 165 TIGECRPLSKTVRFNVLKV---SKGQGAKKSF 193
>gi|449551126|gb|EMD42090.1| hypothetical protein CERSUDRAFT_43078, partial [Ceriporiopsis
subvermispora B]
Length = 149
Score = 171 bits (433), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 90/110 (81%)
Query: 19 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
R++K +GLGFK P EAI GTYIDKKCPFT VSIRGRIL G S KM RT+I+RR+YLH
Sbjct: 27 RWYKDVGLGFKVPAEAISGTYIDKKCPFTSDVSIRGRILTGRVVSTKMTRTLIIRRDYLH 86
Query: 79 FVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
++ KY RYEKRH N+ AH+SP FRV+ GD V +GQCRPLSKTVRFNVL+V
Sbjct: 87 YIPKYNRYEKRHKNLAAHVSPAFRVEVGDIVTVGQCRPLSKTVRFNVLRV 136
>gi|195381291|ref|XP_002049387.1| GJ21555 [Drosophila virilis]
gi|194144184|gb|EDW60580.1| GJ21555 [Drosophila virilis]
Length = 196
Score = 171 bits (433), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 89/152 (58%), Positives = 105/152 (69%), Gaps = 17/152 (11%)
Query: 4 QTEKAFLKQPGKGGNR-------------FWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ E+AF KQ G NR ++ +GLGFKTPREAI+GTYIDKKCP+TG V
Sbjct: 45 ENERAFQKQFGVNLNRKVKPGVTKKKVLRRYRDVGLGFKTPREAIDGTYIDKKCPWTGNV 104
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
IRGRIL G KM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V
Sbjct: 105 RIRGRILTGVVRKTKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPAFRDVEHGDIV 164
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 165 TIGECRPLSKTVRFNVLKV---SKGQGAKKSF 193
>gi|391340471|ref|XP_003744564.1| PREDICTED: 40S ribosomal protein S11-like [Metaseiulus
occidentalis]
Length = 158
Score = 171 bits (433), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 93/161 (57%), Positives = 109/161 (67%), Gaps = 20/161 (12%)
Query: 1 MAE-QTEKAFLKQPGKGGNR---------------FWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ Q E+AF KQ NR F K++GLGFKTP EAI+G YIDKKC
Sbjct: 1 MADFQNERAFQKQETVFLNRKATSTRKIIPTRHVRFHKNVGLGFKTPPEAIKGHYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG V+IRGRIL G KM RTI++RR+YLHFVKKY R+E+RH N+ H+SPCFR V
Sbjct: 61 PFTGNVNIRGRILKGIVIKMKMQRTIVIRRDYLHFVKKYNRFERRHRNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GD V +G+CRPLSKTVRFNVLKV A G+KK F M
Sbjct: 121 TLGDTVTVGECRPLSKTVRFNVLKVTKA---PGSKKQFQRM 158
>gi|291404801|ref|XP_002718781.1| PREDICTED: ribosomal protein S11-like [Oryctolagus cuniculus]
Length = 158
Score = 171 bits (433), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 89/158 (56%), Positives = 112/158 (70%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+ R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTMFQKKKRVLLGETDKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG V IRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCF+ V
Sbjct: 61 PFTGNVPIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFQDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+C LSKT+RFNVLKV A G KK F
Sbjct: 121 QIGDIVTVGECWQLSKTMRFNVLKVTKA---AGTKKQF 155
>gi|198427052|ref|XP_002128561.1| PREDICTED: similar to ribosomal protein S11 isoform 1 [Ciona
intestinalis]
Length = 157
Score = 171 bits (433), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 90/157 (57%), Positives = 107/157 (68%), Gaps = 17/157 (10%)
Query: 1 MAE--QTEKAFLKQP------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MA+ QTE+A+ KQP K R +SIGLGFKTPREA EG YIDKKCPF
Sbjct: 1 MADTAQTERAYQKQPTVFLNKKRVLTSSKKKLRHVRSIGLGFKTPREAFEGNYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKE 105
TG V IRGRIL KM RT +VRR+YLH+V+KY R+EKRH N+ HISPCFR V+
Sbjct: 61 TGNVLIRGRILTAVVTKLKMQRTCVVRRDYLHYVRKYNRFEKRHQNMSVHISPCFRDVQP 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
GD IG+CRP+SKTVRFNV+K+ A G +KK F+
Sbjct: 121 GDIATIGECRPISKTVRFNVVKINKA--KGASKKQFS 155
>gi|71030444|ref|XP_764864.1| 40S ribosomal protein S11 [Theileria parva strain Muguga]
gi|68351820|gb|EAN32581.1| 40S ribosomal protein S11, putative [Theileria parva]
Length = 156
Score = 171 bits (433), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 85/147 (57%), Positives = 100/147 (68%), Gaps = 9/147 (6%)
Query: 4 QTEKAFLKQPG-------KGGN--RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRG 54
Q KAF KQ K GN R+WK +G+GF TP+EA EG Y+DKKCPFTG VSIRG
Sbjct: 7 QVHKAFQKQANVSIKKLQKLGNKARYWKDVGMGFVTPKEAKEGHYVDKKCPFTGNVSIRG 66
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 114
R+L G S KM T+++R NYL +V KY R+EKRH N+P H+SPCF V GD V +GQC
Sbjct: 67 RVLKGMVISHKMKNTLVMRVNYLQYVPKYNRFEKRHKNVPCHVSPCFTVSAGDIVTVGQC 126
Query: 115 RPLSKTVRFNVLKVIPAGSSGGAKKAF 141
RPLSKTVRFNVLKV G +K F
Sbjct: 127 RPLSKTVRFNVLKVEKNEIFGNPRKQF 153
>gi|167525306|ref|XP_001746988.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774768|gb|EDQ88395.1| predicted protein [Monosiga brevicollis MX1]
Length = 159
Score = 171 bits (433), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 84/138 (60%), Positives = 105/138 (76%), Gaps = 4/138 (2%)
Query: 4 QTEKAFLKQPGKGGN-RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCH 62
+ +K L Q K + RF KS+GLGFKTP+EA E YIDKKCP+TG VSIRGR+L G
Sbjct: 20 ENKKRVLGQRAKSQDLRFVKSVGLGFKTPKEARELKYIDKKCPWTGDVSIRGRLLTGVVK 79
Query: 63 SAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTV 121
+ KM RT I+RR+YLH++KKY R+EKRH +P H+SPCFR + GD V +GQCRPLSKTV
Sbjct: 80 TLKMQRTGIIRRDYLHYIKKYNRFEKRHKTLPVHVSPCFRDIAVGDQVTVGQCRPLSKTV 139
Query: 122 RFNVLKVIPAGSSGGAKK 139
RFNVL++ A +SGG+KK
Sbjct: 140 RFNVLRI--AKNSGGSKK 155
>gi|198427050|ref|XP_002128608.1| PREDICTED: similar to ribosomal protein S11 isoform 2 [Ciona
intestinalis]
Length = 159
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/152 (57%), Positives = 104/152 (68%), Gaps = 15/152 (9%)
Query: 4 QTEKAFLKQP------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVS 51
QTE+A+ KQP K R +SIGLGFKTPREA EG YIDKKCPFTG V
Sbjct: 8 QTERAYQKQPTVFLNKKRVLTSSKKKLRHVRSIGLGFKTPREAFEGNYIDKKCPFTGNVL 67
Query: 52 IRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVI 110
IRGRIL KM RT +VRR+YLH+V+KY R+EKRH N+ HISPCFR V+ GD
Sbjct: 68 IRGRILTAVVTKLKMQRTCVVRRDYLHYVRKYNRFEKRHQNMSVHISPCFRDVQPGDIAT 127
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
IG+CRP+SKTVRFNV+K+ A G +KK F+
Sbjct: 128 IGECRPISKTVRFNVVKINKA--KGASKKQFS 157
>gi|195149758|ref|XP_002015823.1| GL11264 [Drosophila persimilis]
gi|198456530|ref|XP_001360357.2| GA21371 [Drosophila pseudoobscura pseudoobscura]
gi|194109670|gb|EDW31713.1| GL11264 [Drosophila persimilis]
gi|198135646|gb|EAL24932.2| GA21371 [Drosophila pseudoobscura pseudoobscura]
Length = 196
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/152 (58%), Positives = 105/152 (69%), Gaps = 17/152 (11%)
Query: 4 QTEKAFLKQPGKGGNR-------------FWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ E+AF KQ G NR ++ +GLGFKTPREAI+GTYIDKKCP+TG V
Sbjct: 45 ENERAFQKQFGVNLNRKVKPGVTKKKILRRYRDVGLGFKTPREAIDGTYIDKKCPWTGDV 104
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
IRGRIL G KM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V
Sbjct: 105 RIRGRILIGVVRKTKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPAFRDVEHGDIV 164
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 165 TIGECRPLSKTVRFNVLKV---NKGQGAKKSF 193
>gi|242024340|ref|XP_002432586.1| 40S ribosomal protein S11, putative [Pediculus humanus corporis]
gi|212518046|gb|EEB19848.1| 40S ribosomal protein S11, putative [Pediculus humanus corporis]
Length = 157
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/158 (55%), Positives = 109/158 (68%), Gaps = 21/158 (13%)
Query: 1 MAEQTEKAFLKQP--------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MA+Q EK+F KQP K G R+ +++GLGFKTPREAIEGTYIDKKCPF
Sbjct: 1 MADQNEKSFQKQPTVFLNRKKSLGIKKNKTGLRYIRNVGLGFKTPREAIEGTYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE- 105
TG VSIRGRIL G KM RTI++RR+YLH+++KY R+EKRH N+ + + F ++
Sbjct: 61 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYIRKYNRFEKRHRNM-SKLKFLFNFRDV 119
Query: 106 --GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V IG+CRPLSKTVRFNVLKV G+KK+F
Sbjct: 120 EIGDVVTIGECRPLSKTVRFNVLKVTKG---QGSKKSF 154
>gi|195436275|ref|XP_002066094.1| GK22117 [Drosophila willistoni]
gi|194162179|gb|EDW77080.1| GK22117 [Drosophila willistoni]
Length = 196
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/153 (59%), Positives = 107/153 (69%), Gaps = 19/153 (12%)
Query: 4 QTEKAFLKQPGKGGNR-------------FWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ E+AF KQ G NR ++ +GLGFKTPREAI+GTYIDKKCP+TG V
Sbjct: 45 ENERAFQKQYGVNLNRKVKPGVTKKKLLRRYRDVGLGFKTPREAIDGTYIDKKCPWTGDV 104
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
IRGRIL G KM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V
Sbjct: 105 RIRGRILTGIVRKTKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPAFRDVEHGDIV 164
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSG-GAKKAF 141
IG+CRPLSKTVRFNVLKV S G GAKK+F
Sbjct: 165 TIGECRPLSKTVRFNVLKV----SKGVGAKKSF 193
>gi|195122331|ref|XP_002005665.1| GI18949 [Drosophila mojavensis]
gi|193910733|gb|EDW09600.1| GI18949 [Drosophila mojavensis]
Length = 196
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/152 (58%), Positives = 105/152 (69%), Gaps = 17/152 (11%)
Query: 4 QTEKAFLKQPGKGGNR-------------FWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ E+AF KQ G NR ++ +GLGFKTPREAI+GTYIDKKCP+TG V
Sbjct: 45 ENERAFQKQFGVNLNRKVKPGITKKKVLRRYRDVGLGFKTPREAIDGTYIDKKCPWTGDV 104
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
IRGRIL G KM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V
Sbjct: 105 RIRGRILTGVVRKTKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPAFRDVEHGDIV 164
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 165 TIGECRPLSKTVRFNVLKV---SKGQGAKKSF 193
>gi|300120047|emb|CBK19601.2| unnamed protein product [Blastocystis hominis]
gi|300123511|emb|CBK24783.2| unnamed protein product [Blastocystis hominis]
Length = 160
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/146 (60%), Positives = 99/146 (67%), Gaps = 11/146 (7%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFW-KSIGLGFKTPREAIEGTYIDKKCPFTGT 49
+ EQ + AF KQ GK N+ W +IGLG KTP AI G Y+DKKCPFT
Sbjct: 4 IQEQNQAAFQKQDKFSYRKVHLLGKKANQRWYANIGLGIKTPAAAINGKYVDKKCPFTSD 63
Query: 50 VSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHV 109
V+IRG IL G S KM RTIIVRR+YL +VKKY+RYEKRH NIPAH SPCF VKEGD V
Sbjct: 64 VTIRGAILKGLVISTKMERTIIVRRDYLRYVKKYRRYEKRHRNIPAHCSPCFDVKEGDIV 123
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSG 135
IGQCRPLSKTVRFNV+ S G
Sbjct: 124 TIGQCRPLSKTVRFNVIDHESQKSKG 149
>gi|323447119|gb|EGB03069.1| hypothetical protein AURANDRAFT_34507 [Aureococcus anophagefferens]
gi|323455673|gb|EGB11541.1| hypothetical protein AURANDRAFT_21483 [Aureococcus anophagefferens]
Length = 167
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/155 (56%), Positives = 108/155 (69%), Gaps = 15/155 (9%)
Query: 2 AEQTEKAFLKQPG-------------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTG 48
AEQTEKA+ KQ K G R+ +++GLGFKTP+ A+EG+Y+DKKCPFTG
Sbjct: 10 AEQTEKAYQKQDAVFIGRKRALAKKSKKGMRYVRNVGLGFKTPKLALEGSYVDKKCPFTG 69
Query: 49 TVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGD 107
VSIRGRIL G S KM RT+++RR+YL++ KY+R+EKRH N+ H SPCF VKEGD
Sbjct: 70 NVSIRGRILKGMVISTKMKRTLVIRRDYLNWCGKYRRFEKRHKNMSVHCSPCFENVKEGD 129
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPA-GSSGGAKKAF 141
V +GQCRPL+KTVRFNVL PA S KK F
Sbjct: 130 IVTVGQCRPLTKTVRFNVLTHEPAVNQSLNVKKVF 164
>gi|429892400|gb|AGA18742.1| ribosomal protein S11, partial [Drosophila melanogaster]
Length = 151
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/151 (60%), Positives = 104/151 (68%), Gaps = 17/151 (11%)
Query: 5 TEKAFLKQPGKGGNRFWK-------------SIGLGFKTPREAIEGTYIDKKCPFTGTVS 51
E+AF KQ G NR K +GLGFKTPREAI+GTYIDKKCP+TG V
Sbjct: 1 NERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVR 60
Query: 52 IRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVI 110
IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V
Sbjct: 61 IRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVT 120
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 121 IGECRPLSKTVRFNVLKV---SKGQGAKKSF 148
>gi|429892396|gb|AGA18740.1| ribosomal protein S11, partial [Drosophila melanogaster]
Length = 151
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/151 (60%), Positives = 104/151 (68%), Gaps = 17/151 (11%)
Query: 5 TEKAFLKQPGKGGNRFWK-------------SIGLGFKTPREAIEGTYIDKKCPFTGTVS 51
E+AF KQ G NR K +GLGFKTPREAI+GTYIDKKCP+TG V
Sbjct: 1 NERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVR 60
Query: 52 IRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVI 110
IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V
Sbjct: 61 IRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEXGDIVT 120
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 121 IGECRPLSKTVRFNVLKV---SKGQGAKKSF 148
>gi|38047811|gb|AAR09808.1| similar to Drosophila melanogaster CG8857, partial [Drosophila
yakuba]
Length = 150
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/150 (60%), Positives = 104/150 (69%), Gaps = 17/150 (11%)
Query: 6 EKAFLKQPGKGGNRFWK-------------SIGLGFKTPREAIEGTYIDKKCPFTGTVSI 52
E+AF KQ G NR K +GLGFKTPREAI+GTYIDKKCP+TG V I
Sbjct: 1 ERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVRI 60
Query: 53 RGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVII 111
RGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V I
Sbjct: 61 RGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTI 120
Query: 112 GQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
G+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 121 GECRPLSKTVRFNVLKV---SKGQGAKKSF 147
>gi|290462803|gb|ADD24449.1| 40S ribosomal protein S11 [Lepeophtheirus salmonis]
gi|290561645|gb|ADD38222.1| 40S ribosomal protein S11 [Lepeophtheirus salmonis]
Length = 152
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/152 (59%), Positives = 106/152 (69%), Gaps = 14/152 (9%)
Query: 1 MAEQTEKAFLKQPG-----KGG-----NRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
MA+Q E+AF KQP KGG +RF + GLGFK PREA EG YIDKKCPFTG V
Sbjct: 1 MADQNERAFQKQPTIFLARKGGLKKTESRFVVNPGLGFKIPREAREGHYIDKKCPFTGKV 60
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHV 109
SIRGRIL G KM T ++RR+YLH+VKKY R+EKRH N+ H+SPCFR V+ GD +
Sbjct: 61 SIRGRILTGVITKLKMKNTCVIRRDYLHYVKKYNRFEKRHKNMSVHLSPCFRDVQIGDVL 120
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+G+CRPLSKTV+FN LKV S G KK F
Sbjct: 121 TVGECRPLSKTVKFNTLKV---NKSSGNKKTF 149
>gi|123394395|ref|XP_001300557.1| hypothetical protein [Trichomonas vaginalis G3]
gi|123425501|ref|XP_001306827.1| hypothetical protein [Trichomonas vaginalis G3]
gi|123472884|ref|XP_001319633.1| hypothetical protein [Trichomonas vaginalis G3]
gi|154412006|ref|XP_001579037.1| hypothetical protein [Trichomonas vaginalis G3]
gi|154415799|ref|XP_001580923.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121881616|gb|EAX87627.1| hypothetical protein TVAG_313300 [Trichomonas vaginalis G3]
gi|121888423|gb|EAX93897.1| hypothetical protein TVAG_131850 [Trichomonas vaginalis G3]
gi|121902421|gb|EAY07410.1| hypothetical protein TVAG_419520 [Trichomonas vaginalis G3]
gi|121913239|gb|EAY18051.1| hypothetical protein TVAG_113950 [Trichomonas vaginalis G3]
gi|121915146|gb|EAY19937.1| hypothetical protein TVAG_401900 [Trichomonas vaginalis G3]
Length = 155
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/149 (57%), Positives = 104/149 (69%), Gaps = 12/149 (8%)
Query: 4 QTEKAFLKQP-----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSI 52
QTE+AF KQP + R+ KSIGL +TP+ A E YID KCPFTGTVSI
Sbjct: 5 QTERAFQKQPQLFLASKKHANAEKKQRYVKSIGLKIETPKTAEEREYIDAKCPFTGTVSI 64
Query: 53 RGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
RGR+L G S KM RTII+RR+YL +++KY+R+EKRH+ IPAHISP F VKEGD V +
Sbjct: 65 RGRVLRGVVVSTKMRRTIIIRRDYLQWIRKYKRFEKRHTKIPAHISPAFLVKEGDLVTVA 124
Query: 113 QCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+CRPLSKTV FNV+ V PA + G K+ F
Sbjct: 125 ECRPLSKTVHFNVIHVKPA-AVGADKRQF 152
>gi|15213810|gb|AAK92180.1|AF400208_1 ribosomal protein S11 [Spodoptera frugiperda]
Length = 125
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/111 (71%), Positives = 92/111 (82%), Gaps = 1/111 (0%)
Query: 19 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
R K++GLGFKTPREAIEGTYIDKKCPFTG VSIRGRIL G KM RTI++RR+YLH
Sbjct: 2 RHSKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLH 61
Query: 79 FVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 128
++ KY R+EKRH N+ H+SPCFR V+ GD V IG+CRPLSKT+RFNVLKV
Sbjct: 62 YLPKYNRFEKRHRNMSVHLSPCFRDVELGDIVTIGECRPLSKTIRFNVLKV 112
>gi|160550157|gb|ABX44783.1| putative 40S ribosomal protein RPS11 [Flustra foliacea]
Length = 132
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 79/113 (69%), Positives = 93/113 (82%), Gaps = 1/113 (0%)
Query: 15 KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRR 74
K R++KSIGLGFKTPREAI GTYIDKKCPFTG V+IRGRIL G KM RTI++RR
Sbjct: 5 KANPRWFKSIGLGFKTPREAIHGTYIDKKCPFTGPVNIRGRILTGVVKKMKMQRTIVIRR 64
Query: 75 NYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVL 126
+YLHF+KKY+R+EKRH N+ H+SPCFR V GD V +G+CRPLSKTVRFNV+
Sbjct: 65 DYLHFIKKYRRFEKRHKNMSVHLSPCFRDVSVGDVVTVGECRPLSKTVRFNVI 117
>gi|70989391|ref|XP_749545.1| 40S ribosomal protein S11 [Aspergillus fumigatus Af293]
gi|66847176|gb|EAL87507.1| 40S ribosomal protein S11 [Aspergillus fumigatus Af293]
gi|159128956|gb|EDP54070.1| 40S ribosomal protein S11 [Aspergillus fumigatus A1163]
Length = 176
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 82/135 (60%), Positives = 98/135 (72%), Gaps = 14/135 (10%)
Query: 1 MAEQTEKAFLKQPGKGGN--------------RFWKSIGLGFKTPREAIEGTYIDKKCPF 46
+ Q+E+AF KQP N R++K +GLGF+TP+ AIEG+YIDKKCPF
Sbjct: 5 LTVQSERAFQKQPHIFLNSKTKAKSKKVGQTRRWYKDVGLGFRTPKTAIEGSYIDKKCPF 64
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
TG VSIRGRIL G S KM+RTII+RR YLH+V KY RYEKRH N+ AH+SP FRV+EG
Sbjct: 65 TGMVSIRGRILTGRVVSTKMHRTIIIRREYLHYVPKYNRYEKRHKNLAAHVSPAFRVEEG 124
Query: 107 DHVIIGQCRPLSKTV 121
D V +GQCRPLSKTV
Sbjct: 125 DWVTVGQCRPLSKTV 139
>gi|84995402|ref|XP_952423.1| 40S ribosomal protein S11 [Theileria annulata strain Ankara]
gi|65302584|emb|CAI74691.1| 40S ribosomal protein S11, putative [Theileria annulata]
Length = 156
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/147 (57%), Positives = 100/147 (68%), Gaps = 9/147 (6%)
Query: 4 QTEKAFLKQPG-------KGGN--RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRG 54
Q KAF KQ K G+ R+WK +G+GF TP+EA EG Y+DKKCPFTG VSIRG
Sbjct: 7 QVHKAFQKQANVSIKKLQKLGHKARYWKDVGMGFVTPKEAKEGHYVDKKCPFTGNVSIRG 66
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 114
R+L G S KM T+++R NYL +V KY R+EKRH N+P H+SPCF V GD V +GQC
Sbjct: 67 RVLKGMVISHKMKNTLVMRVNYLQYVPKYNRFEKRHKNVPCHVSPCFTVSAGDIVTVGQC 126
Query: 115 RPLSKTVRFNVLKVIPAGSSGGAKKAF 141
RPLSKTVRFNVLKV G +K F
Sbjct: 127 RPLSKTVRFNVLKVEKNEIFGNPRKQF 153
>gi|429892410|gb|AGA18747.1| ribosomal protein S11, partial [Drosophila melanogaster]
Length = 151
Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 91/151 (60%), Positives = 103/151 (68%), Gaps = 17/151 (11%)
Query: 5 TEKAFLKQPGKGGNRFWK-------------SIGLGFKTPREAIEGTYIDKKCPFTGTVS 51
E+AF KQ G NR K +GLGFKTPREAI+GTYIDKKCP+TG V
Sbjct: 1 NERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVR 60
Query: 52 IRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVI 110
IRGRIL G AKM RTI++RR+YLHFV+KY R EKRH N+ H SP FR V+ GD V
Sbjct: 61 IRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRXEKRHRNMSVHCSPVFRDVEHGDIVT 120
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 121 IGECRPLSKTVRFNVLKV---SKGQGAKKSF 148
>gi|170085139|ref|XP_001873793.1| 40S ribosomal protein S11 [Laccaria bicolor S238N-H82]
gi|164651345|gb|EDR15585.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 155
Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 109/156 (69%), Gaps = 17/156 (10%)
Query: 1 MAE-QTEKAFLKQ------PGKGGN-------RFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MA+ Q EKAF KQ +GG R++K +GLGFKTP EAI GTYIDKKCPF
Sbjct: 1 MADAQIEKAFQKQNLFQNAKARGGKKVATKEKRWYKDVGLGFKTPSEAINGTYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
TG +SIRGRIL+G S KM RTII+RR+YLH++ KY RYEKRH N+ AH SP FRV G
Sbjct: 61 TGDISIRGRILSGKVVSTKMTRTIIIRRDYLHYIPKYNRYEKRHKNLAAHASPAFRVDVG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
D V +GQCRPLSKTVRFNVL+V S A KAF
Sbjct: 121 DVVTVGQCRPLSKTVRFNVLRV---SKSKAATKAFN 153
>gi|219121838|ref|XP_002181265.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407251|gb|EEC47188.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 166
Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/153 (58%), Positives = 105/153 (68%), Gaps = 15/153 (9%)
Query: 3 EQTEKAFLKQPG-------KGGN-------RFWKSIGLGFKTPREAIEGTYIDKKCPFTG 48
+Q EKA+ KQ GN RF KS+GLG KTP AIE +++DKKCPFTG
Sbjct: 12 DQNEKAYQKQDAIFIARKRAMGNQQRQKPMRFVKSVGLGIKTPAAAIEASFVDKKCPFTG 71
Query: 49 TVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDH 108
VSIRGRIL G S KM RTIIVRR+YLH++ KY+R+EKRH+NI H SP F VK+GD
Sbjct: 72 NVSIRGRILKGLVISTKMKRTIIVRRDYLHYITKYRRFEKRHTNIAVHCSPAFPVKDGDI 131
Query: 109 VIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V IGQCRPLSKTVRFNV+ + P G KK+F
Sbjct: 132 VTIGQCRPLSKTVRFNVVALEPQRVIQG-KKSF 163
>gi|123408443|ref|XP_001303198.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121884558|gb|EAX90268.1| hypothetical protein TVAG_099560 [Trichomonas vaginalis G3]
Length = 155
Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 84/149 (56%), Positives = 103/149 (69%), Gaps = 12/149 (8%)
Query: 4 QTEKAFLKQP-----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSI 52
Q E+AF KQP + R+ KSIGL +TP+ A E YID KCPFTGTVSI
Sbjct: 5 QVERAFQKQPQLFLASKKHANAEKKQRYVKSIGLKIETPKTAEEREYIDAKCPFTGTVSI 64
Query: 53 RGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
RGR+L G S KM RTII+RR+YL +++KY+R+EKRH+ IPAHISP F VKEGD V +
Sbjct: 65 RGRVLRGVVVSTKMRRTIIIRRDYLQWIRKYKRFEKRHTKIPAHISPAFLVKEGDLVTVA 124
Query: 113 QCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+CRPLSKTV FNV+ V PA + G K+ F
Sbjct: 125 ECRPLSKTVHFNVIHVKPA-AVGADKRQF 152
>gi|429892402|gb|AGA18743.1| ribosomal protein S11, partial [Drosophila melanogaster]
Length = 151
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 90/151 (59%), Positives = 103/151 (68%), Gaps = 17/151 (11%)
Query: 5 TEKAFLKQPGKGGNRFWK-------------SIGLGFKTPREAIEGTYIDKKCPFTGTVS 51
E+AF KQ G NR K +GLGFKTPREAI+GTYIDKKCP+TG V
Sbjct: 1 NERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVR 60
Query: 52 IRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVI 110
IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V
Sbjct: 61 IRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVT 120
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
G+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 121 XGECRPLSKTVRFNVLKV---SKGQGAKKSF 148
>gi|429892404|gb|AGA18744.1| ribosomal protein S11, partial [Drosophila melanogaster]
Length = 151
Score = 167 bits (424), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 90/151 (59%), Positives = 103/151 (68%), Gaps = 17/151 (11%)
Query: 5 TEKAFLKQPGKGGNRFWK-------------SIGLGFKTPREAIEGTYIDKKCPFTGTVS 51
E+AF KQ G NR K +GLGFKTPREAI+GTYIDKKCP+TG V
Sbjct: 1 NERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVR 60
Query: 52 IRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVI 110
IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V
Sbjct: 61 IRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVT 120
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IG+CRP SKTVRFNVLKV GAKK+F
Sbjct: 121 IGECRPXSKTVRFNVLKV---SKGQGAKKSF 148
>gi|328772516|gb|EGF82554.1| hypothetical protein BATDEDRAFT_9547, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 145
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/131 (64%), Positives = 97/131 (74%), Gaps = 7/131 (5%)
Query: 5 TEKAFLKQPG-----KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGT-VSIRGRILA 58
TEKAF Q G K R++ +GLGFKTP EAI+G YIDKKCPFT + VSIRGRIL
Sbjct: 1 TEKAFQSQAGMFHAKKKPIRWYNDVGLGFKTPTEAIKGHYIDKKCPFTSSSVSIRGRILT 60
Query: 59 GTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF-RVKEGDHVIIGQCRPL 117
G S KM RT+I+RR YLH++KKY RYEKRH N+ AH+SP F V GD V +GQCRPL
Sbjct: 61 GVVMSTKMKRTLIIRREYLHYIKKYNRYEKRHKNLAAHVSPAFIDVAAGDTVTVGQCRPL 120
Query: 118 SKTVRFNVLKV 128
SKTVRFNVLKV
Sbjct: 121 SKTVRFNVLKV 131
>gi|429892392|gb|AGA18738.1| ribosomal protein S11, partial [Drosophila melanogaster]
Length = 151
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/151 (59%), Positives = 102/151 (67%), Gaps = 17/151 (11%)
Query: 5 TEKAFLKQPGKGGNRFWK-------------SIGLGFKTPREAIEGTYIDKKCPFTGTVS 51
E+AF KQ G NR K +GLGFKTPREAI+GTYIDKKCP+TG V
Sbjct: 1 NERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVR 60
Query: 52 IRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVI 110
IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V
Sbjct: 61 IRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVT 120
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
G+CRPLSKTVRFNVLKV GAKK F
Sbjct: 121 XGECRPLSKTVRFNVLKV---SKGQGAKKXF 148
>gi|429892406|gb|AGA18745.1| ribosomal protein S11, partial [Drosophila melanogaster]
Length = 151
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/151 (59%), Positives = 102/151 (67%), Gaps = 17/151 (11%)
Query: 5 TEKAFLKQPGKGGNRFWK-------------SIGLGFKTPREAIEGTYIDKKCPFTGTVS 51
E+AF KQ G NR K +GLGFKTPREAI+GTYIDKKCP+TG V
Sbjct: 1 NERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVR 60
Query: 52 IRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVI 110
IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V
Sbjct: 61 IRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVT 120
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
G+CRPLSKTVRFNVLKV GAKK F
Sbjct: 121 XGECRPLSKTVRFNVLKV---SKGQGAKKXF 148
>gi|430813612|emb|CCJ29051.1| unnamed protein product [Pneumocystis jirovecii]
Length = 186
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 104/169 (61%), Gaps = 42/169 (24%)
Query: 1 MAEQTEKAFLKQP--------------GKGGNRFWKSIGLGFKTPREAIEGT-------- 38
+ Q+E+AF KQP GKG R++K +GLGFKTP+EAI+G
Sbjct: 4 LVLQSERAFQKQPHVFQNSKMILHKKSGKG-RRWYKEVGLGFKTPKEAIKGQYIENFVVL 62
Query: 39 -------------------YIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
YIDKKCPF G VSIRGRIL GT S KM RTII+RR YLH+
Sbjct: 63 ISVLHFLIIIIFCLELIWKYIDKKCPFVGNVSIRGRILTGTVVSTKMTRTIIIRREYLHY 122
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
+ KY RYEKRH N AH+SP FRV EGD V +GQCRPLSKTVRFNVL+V
Sbjct: 123 IPKYNRYEKRHKNFAAHLSPAFRVNEGDIVTVGQCRPLSKTVRFNVLRV 171
>gi|354484518|ref|XP_003504434.1| PREDICTED: 40S ribosomal protein S11-like [Cricetulus griseus]
gi|344252549|gb|EGW08653.1| 40S ribosomal protein S11 [Cricetulus griseus]
Length = 158
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 82/145 (56%), Positives = 101/145 (69%), Gaps = 16/145 (11%)
Query: 4 QTEKAFLKQPGKGGN---------------RFWKSIGLGFKTPREAIEGTYIDKKCPFTG 48
QTE A+ KQP N R++K+IGLGFK P+EAIEGT+IDKKCPFTG
Sbjct: 5 QTESAYQKQPATFQNKKRVLLGETGKENLPRYYKNIGLGFKMPKEAIEGTFIDKKCPFTG 64
Query: 49 TVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGD 107
VSIRG IL+G KM RTI++RR+YL +++KY +EKRH N+ AH+SPCFR V+ GD
Sbjct: 65 NVSIRGWILSGVVTKMKMRRTIVIRRDYLQYIRKYNCFEKRHKNMSAHLSPCFRDVQIGD 124
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAG 132
V +G+CRPLSK V FNVLKV A
Sbjct: 125 IVTVGECRPLSKMVHFNVLKVTKAA 149
>gi|5764667|gb|AAD51368.1|AF177283_1 putative ribosomal protein S11 [Physarum polycephalum]
Length = 158
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 99/128 (77%), Gaps = 4/128 (3%)
Query: 18 NRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSA-KMNRTIIVRRNY 76
R+ + +GLG+KTP+ A+EGT++D KCPFTG VSIRGRIL G SA KM RT++VRRNY
Sbjct: 34 TRYVRQVGLGYKTPKAALEGTFVDDKCPFTGNVSIRGRILRGVVVSAGKMKRTVVVRRNY 93
Query: 77 LHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGG 136
LH+++KY+RYEKRH+N H SP VKEGD V +G+CRPLSKTVRFNVLKV GS G
Sbjct: 94 LHYIQKYKRYEKRHTNFSVHCSPALDVKEGDTVTVGECRPLSKTVRFNVLKV--HGSKKG 151
Query: 137 AKKAFTAM 144
+ K FT+
Sbjct: 152 S-KVFTSF 158
>gi|326430788|gb|EGD76358.1| 40S ribosomal protein S11 [Salpingoeca sp. ATCC 50818]
Length = 156
Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/125 (64%), Positives = 96/125 (76%), Gaps = 4/125 (3%)
Query: 19 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
RF K++GLGFKTPREA E YID+KCPFTG VSIRGR+L G + KM RT +VRR+YLH
Sbjct: 33 RFVKNVGLGFKTPREARELEYIDRKCPFTGDVSIRGRVLNGVVKTLKMQRTCVVRRDYLH 92
Query: 79 FVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGA 137
F+ KY+R+EKRH N+ H+SP FR + GD V IGQCRPLSKTVRFNVL+V A GA
Sbjct: 93 FIPKYRRFEKRHKNLSVHVSPAFRDIAVGDAVTIGQCRPLSKTVRFNVLRVHKA---KGA 149
Query: 138 KKAFT 142
KK F+
Sbjct: 150 KKQFS 154
>gi|323310217|gb|EGA63409.1| Rps11bp [Saccharomyces cerevisiae FostersO]
Length = 120
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 76/114 (66%), Positives = 93/114 (81%), Gaps = 2/114 (1%)
Query: 28 FKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYE 87
FKTP+ AIEG+YIDKKCPFTG VSIRG+IL GT S KM+RTI++RR YLH++ KY RYE
Sbjct: 6 FKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYE 65
Query: 88 KRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
KRH N+P H+SP FRV+ GD V +GQCRP+SKTVRFNV+KV + ++G A K F
Sbjct: 66 KRHKNVPVHVSPAFRVQVGDIVTVGQCRPISKTVRFNVVKV--SAAAGKANKQF 117
>gi|332257886|ref|XP_003278036.1| PREDICTED: 40S ribosomal protein S11-like isoform 1 [Nomascus
leucogenys]
gi|441639204|ref|XP_004090193.1| PREDICTED: 40S ribosomal protein S11-like isoform 2 [Nomascus
leucogenys]
gi|441639207|ref|XP_004090194.1| PREDICTED: 40S ribosomal protein S11-like isoform 3 [Nomascus
leucogenys]
gi|441639210|ref|XP_004090195.1| PREDICTED: 40S ribosomal protein S11-like isoform 4 [Nomascus
leucogenys]
gi|441639213|ref|XP_004090196.1| PREDICTED: 40S ribosomal protein S11-like isoform 5 [Nomascus
leucogenys]
gi|441639216|ref|XP_004090197.1| PREDICTED: 40S ribosomal protein S11-like isoform 6 [Nomascus
leucogenys]
Length = 158
Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 109/158 (68%), Gaps = 17/158 (10%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+ G R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTMFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRG+IL+G KM R ++RR+YLH+++KY +EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGQILSGVATKMKMQRITVIRRDYLHYIRKYNHFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ D V +G+C+PLSKTV NVL+V A + + F
Sbjct: 121 QISDIVTVGECQPLSKTVCLNVLRVTKAAGTKKQLQKF 158
>gi|298708385|emb|CBJ48448.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 191
Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/146 (60%), Positives = 103/146 (70%), Gaps = 17/146 (11%)
Query: 2 AEQTEKAFLKQPG---------------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
AEQ EKA+ KQ G RF K++GLGFKTP+ A EGTY+DKKCPF
Sbjct: 31 AEQHEKAYQKQDAIFVGAKRVLGKKVAKSKGMRFVKNVGLGFKTPKTAREGTYVDKKCPF 90
Query: 47 TGTVSIRGRILAGTCHSA-KMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VK 104
TG VSIRGRIL G SA KM TI++RR+YLHFV KY+R+EKRH N+ H +PC++ VK
Sbjct: 91 TGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHFVSKYRRFEKRHKNMTVHCAPCWQNVK 150
Query: 105 EGDHVIIGQCRPLSKTVRFNVLKVIP 130
EGD V IGQCRPLSKTVRFNVL+ P
Sbjct: 151 EGDIVTIGQCRPLSKTVRFNVLEHEP 176
>gi|429892408|gb|AGA18746.1| ribosomal protein S11, partial [Drosophila melanogaster]
Length = 151
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/151 (58%), Positives = 101/151 (66%), Gaps = 17/151 (11%)
Query: 5 TEKAFLKQPGKGGNRFWK-------------SIGLGFKTPREAIEGTYIDKKCPFTGTVS 51
E+AF KQ G NR K +GLGFKTPREAI+GTYIDKKCP+TG V
Sbjct: 1 NERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVR 60
Query: 52 IRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVI 110
IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V
Sbjct: 61 IRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEXGDIVT 120
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IG+CRPLSKTVRF V KV GAKK F
Sbjct: 121 IGECRPLSKTVRFXVXKV---SKGQGAKKXF 148
>gi|109072632|ref|XP_001099440.1| PREDICTED: 40S ribosomal protein S11-like isoform 3 [Macaca
mulatta]
Length = 158
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/158 (55%), Positives = 109/158 (68%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE A+ KQ G+ G R++K+IGLGFKTP+EA EGTYIDKKC
Sbjct: 1 MADVQTEHAYQKQLTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEATEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSI+GRIL+G KM TI++RR+YLH+++KY R+E RH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIQGRILSGVVTKMKMQGTIVIRRDYLHYIRKYNRFENRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+C PLSKTV FNVLKV A G KK F
Sbjct: 121 QIGDIVTVGECWPLSKTVCFNVLKVTKA---AGTKKQF 155
>gi|429892390|gb|AGA18737.1| ribosomal protein S11, partial [Drosophila melanogaster]
Length = 151
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/151 (58%), Positives = 101/151 (66%), Gaps = 17/151 (11%)
Query: 5 TEKAFLKQPGKGGNRFWK-------------SIGLGFKTPREAIEGTYIDKKCPFTGTVS 51
E+AF KQ G NR K +GLGFKTPREAI+GTYIDKKCP+TG V
Sbjct: 1 NERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVR 60
Query: 52 IRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVI 110
IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V
Sbjct: 61 IRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVT 120
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IG+CRPLSKTVR NV KV GAKK F
Sbjct: 121 IGECRPLSKTVRXNVXKV---SKGQGAKKXF 148
>gi|88770702|gb|ABD51954.1| 60S ribosomal protein 11 [Rhodomonas salina]
Length = 145
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 72/108 (66%), Positives = 88/108 (81%)
Query: 21 WKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
+K+IG+G K P EAI Y DKKCPF G +SIRGRIL GT S KM R++I+RR+YLH++
Sbjct: 24 FKNIGMGLKAPLEAINNNYFDKKCPFRGLISIRGRILRGTVISTKMKRSVIIRRDYLHWI 83
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
KY+R+EKRH NIP H SPCFRV+EGD V IGQCRPLSKT+RFNVL++
Sbjct: 84 SKYKRFEKRHKNIPCHCSPCFRVQEGDLVTIGQCRPLSKTIRFNVLRI 131
>gi|224000754|ref|XP_002290049.1| RS11, ribosomal protein 11 40S small ribosomal subunit
[Thalassiosira pseudonana CCMP1335]
gi|220973471|gb|EED91801.1| RS11, ribosomal protein 11 40S small ribosomal subunit
[Thalassiosira pseudonana CCMP1335]
Length = 165
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/121 (64%), Positives = 93/121 (76%)
Query: 19 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
R+ K++GLG KTP AIEG Y+DKKCPF+G VSIRG+IL G S KM RTI+VRR+YLH
Sbjct: 41 RWVKNVGLGIKTPDAAIEGNYVDKKCPFSGNVSIRGKILKGLVISTKMKRTIVVRRDYLH 100
Query: 79 FVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAK 138
++ KY+R+EKRH NI AH SPCF VKEGD V IGQCRPL+KTV+FNV+ S G K
Sbjct: 101 YIPKYRRFEKRHKNIHAHCSPCFPVKEGDIVTIGQCRPLAKTVKFNVVAHEAQRESSGKK 160
Query: 139 K 139
K
Sbjct: 161 K 161
>gi|160331051|ref|XP_001712233.1| rps11 [Hemiselmis andersenii]
gi|159765680|gb|ABW97908.1| rps11 [Hemiselmis andersenii]
Length = 153
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 71/108 (65%), Positives = 90/108 (83%)
Query: 21 WKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
+++IGLG KTP EA + + DKKCPFTG +SIRGRI+ G S KMNRT+IVRR+YLH++
Sbjct: 31 FRNIGLGLKTPIEATKNNFFDKKCPFTGNISIRGRIIRGRVVSTKMNRTVIVRRDYLHWI 90
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
KY+R+EKRH NIP H SPCFR++EGD V IGQCRP+SKT+RFNVL++
Sbjct: 91 AKYKRFEKRHKNIPCHCSPCFRIQEGDFVTIGQCRPISKTIRFNVLRL 138
>gi|114647921|ref|XP_001140490.1| PREDICTED: 40S ribosomal protein S11-like isoform 1 [Pan
troglodytes]
gi|410047567|ref|XP_003952408.1| PREDICTED: 40S ribosomal protein S11-like isoform 2 [Pan
troglodytes]
gi|410047569|ref|XP_003952409.1| PREDICTED: 40S ribosomal protein S11-like isoform 3 [Pan
troglodytes]
Length = 161
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 110/161 (68%), Gaps = 23/161 (14%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE A+ KQP G+ G R++K+IGLGFKTP+EA EGTYIDKKC
Sbjct: 1 MADIQTESAYQKQPTIFQNKKRVLLGETGKEKLLRYYKNIGLGFKTPKEATEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVK 104
PFTG VSIRGRIL+G KM RT ++RR++LH+++KY R+EK H N+ H+ PCFR
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTTVIRRDHLHYIRKYNRFEKHHKNMSVHLFPCFRDA 120
Query: 105 E-GDHVIIGQ---CRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+ CRPLSKT+RFNVL+V A G KK F
Sbjct: 121 QIGDIVTVGECRPCRPLSKTMRFNVLQVTKA---AGTKKQF 158
>gi|402868183|ref|XP_003898191.1| PREDICTED: 40S ribosomal protein S11-like [Papio anubis]
Length = 135
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/124 (63%), Positives = 96/124 (77%), Gaps = 4/124 (3%)
Query: 19 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
R++K+IGLGFKTP+EAIEGTYIDKKCPFTG VSIRGRIL+G KM TI++RR+YLH
Sbjct: 12 RYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQGTIVIRRDYLH 71
Query: 79 FVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGA 137
+++KY R+E RH N+ H+S CFR V+ GD V +G+C PLSKTV FNVLKV A G
Sbjct: 72 YIRKYNRFENRHKNMSVHLSACFRDVQIGDIVKVGECWPLSKTVCFNVLKVTKA---AGT 128
Query: 138 KKAF 141
KK F
Sbjct: 129 KKQF 132
>gi|399949748|gb|AFP65405.1| 40S ribosomal protein S11 [Chroomonas mesostigmatica CCMP1168]
Length = 186
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 69/107 (64%), Positives = 90/107 (84%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+++G GF+ P+EA+E Y DK CPFTG +SIRGR++ G S KMNRTIIVRR+YLH++
Sbjct: 63 RNVGQGFRIPQEALEKDYRDKNCPFTGNISIRGRLIRGKVVSTKMNRTIIVRRDYLHWIP 122
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
KY+R+EKRH NIP+H SPCFRV+EGD V IGQCRP+SKT+RFNV+++
Sbjct: 123 KYKRFEKRHKNIPSHCSPCFRVQEGDFVTIGQCRPISKTIRFNVIQM 169
>gi|443924033|gb|ELU43112.1| 40S ribosomal protein S11 [Rhizoctonia solani AG-1 IA]
Length = 131
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 88/110 (80%), Gaps = 3/110 (2%)
Query: 19 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
R++K +GLGFKTP EAI GTYIDKKCPFTG VSIRGRIL G S KM RTII+RR+YLH
Sbjct: 12 RWYKDVGLGFKTPAEAINGTYIDKKCPFTGDVSIRGRILTGRVVSTKMTRTIIIRRDYLH 71
Query: 79 FVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
++ K Y KRH N+ AH SP FR++ GD V +GQCRPLSKTVRFNVL+V
Sbjct: 72 YIPK---YSKRHKNLAAHASPAFRIELGDTVTVGQCRPLSKTVRFNVLRV 118
>gi|429892398|gb|AGA18741.1| ribosomal protein S11, partial [Drosophila melanogaster]
Length = 151
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/151 (58%), Positives = 101/151 (66%), Gaps = 17/151 (11%)
Query: 5 TEKAFLKQPGKGGNRFWK-------------SIGLGFKTPREAIEGTYIDKKCPFTGTVS 51
E+AF KQ G NR K +GLGFKTPREAI+GTYIDKKCP+TG V
Sbjct: 1 NERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVR 60
Query: 52 IRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVI 110
IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V
Sbjct: 61 IRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVT 120
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IG+CRPLSKTV VLKV GAKK+F
Sbjct: 121 IGECRPLSKTVXXXVLKV---SKGQGAKKSF 148
>gi|218195558|gb|EEC77985.1| hypothetical protein OsI_17370 [Oryza sativa Indica Group]
Length = 535
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/100 (84%), Positives = 85/100 (85%), Gaps = 15/100 (15%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQR 85
FTGTVSIRGRI+AGTCHSAKMNRTIIVRRNYLHFVKKYQR
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQR 100
>gi|332031451|gb|EGI70945.1| 40S ribosomal protein S11 [Acromyrmex echinatior]
Length = 134
Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/120 (63%), Positives = 90/120 (75%), Gaps = 1/120 (0%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
S +GFKTPREA+EGTYIDKKCPFTG SIRGRIL G KM RT ++RR+YLH+++K
Sbjct: 15 SRNVGFKTPREALEGTYIDKKCPFTGNASIRGRILTGMVQKLKMQRTAVIRRDYLHYIRK 74
Query: 83 YQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
Y R+EKRH NI AH++PCFR V+ GD V IG CR LSKTVRFNVLK+ S + K F
Sbjct: 75 YNRFEKRHHNISAHLNPCFRDVEIGDVVTIGDCRSLSKTVRFNVLKMSKGTESKKSFKKF 134
>gi|429892394|gb|AGA18739.1| ribosomal protein S11, partial [Drosophila melanogaster]
Length = 151
Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/151 (57%), Positives = 99/151 (65%), Gaps = 17/151 (11%)
Query: 5 TEKAFLKQPGKGGNRFWK-------------SIGLGFKTPREAIEGTYIDKKCPFTGTVS 51
E+AF KQ G NR K +GLGFKTPREAI+GTYIDKKCP+TG V
Sbjct: 1 NERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVR 60
Query: 52 IRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVI 110
IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V
Sbjct: 61 IRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVX 120
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
IG+CRPLSKTVR KV GAKK F
Sbjct: 121 IGECRPLSKTVRXXXXKV---SKGQGAKKXF 148
>gi|148704841|gb|EDL36788.1| mCG49907 [Mus musculus]
Length = 158
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 104/154 (67%), Gaps = 19/154 (12%)
Query: 4 QTEKAFLKQPGKGGNR---------------FWKSIGLGFKTPREAIEGTYIDKKCPFTG 48
QTE A+ KQP N+ ++K+I LGFK P+EAI+GTYIDKKCPFTG
Sbjct: 5 QTEHAYQKQPTIFQNKKRVLLGETGKEKLPPYYKNIALGFKMPKEAIKGTYIDKKCPFTG 64
Query: 49 TVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGD 107
VSIRG IL+G KM RTI++ ++YL +++KY R+EK H N+ H+SPCFR V+ GD
Sbjct: 65 NVSIRGWILSGVVTKMKMQRTIVICQDYLCYIRKYNRFEKCHKNMSVHLSPCFRDVQIGD 124
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 125 IVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>gi|297725793|ref|NP_001175260.1| Os07g0565101 [Oryza sativa Japonica Group]
gi|255677890|dbj|BAH93988.1| Os07g0565101 [Oryza sativa Japonica Group]
Length = 129
Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/105 (80%), Positives = 86/105 (81%), Gaps = 15/105 (14%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRH 90
FTGTVSIRGRI+AGTCHSAKMNRTIIVRRNYLHFVKKYQR H
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNYH 105
>gi|414585477|tpg|DAA36048.1| TPA: hypothetical protein ZEAMMB73_665324 [Zea mays]
Length = 113
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 84/99 (84%), Gaps = 15/99 (15%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQ 84
FTGTVSIRGRI+AGTCHSAKMNRTIIVRRNYLHFVKKYQ
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQ 99
>gi|219887011|gb|ACL53880.1| unknown [Zea mays]
Length = 107
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 84/99 (84%), Gaps = 15/99 (15%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQ 84
FTGTVSIRGRI+AGTCHSAKMNRTIIVRRNYLHFVKKYQ
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQ 99
>gi|346465153|gb|AEO32421.1| hypothetical protein [Amblyomma maculatum]
Length = 130
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/130 (60%), Positives = 92/130 (70%), Gaps = 15/130 (11%)
Query: 1 MAEQTEKAFLKQPG-----KGG---------NRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MAEQ E+AF KQP K G R++KS+GLGFKTPREAI GTYIDKKCPF
Sbjct: 1 MAEQVERAFQKQPTVFLNRKAGLPKGNPKRVQRYYKSVGLGFKTPREAIHGTYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKE 105
TG VSIRGRIL G KM RTI++RR+YLH+V+KY R+EKRH N+ H+SP FR V
Sbjct: 61 TGNVSIRGRILRGVVVKMKMQRTIVIRRDYLHYVRKYNRFEKRHRNMSVHLSPAFRDVAV 120
Query: 106 GDHVIIGQCR 115
GD V +G+CR
Sbjct: 121 GDVVTVGECR 130
>gi|444525842|gb|ELV14170.1| 40S ribosomal protein S11 [Tupaia chinensis]
Length = 155
Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 79/154 (51%), Positives = 107/154 (69%), Gaps = 19/154 (12%)
Query: 4 QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKCPFTG 48
QT++A+ KQ G+ G R++K+IGLGF+TP+EAI+GTYIDKKCPFTG
Sbjct: 5 QTKRAYQKQSTIFQNKKRVLLGEAGKEKLPRYYKNIGLGFQTPKEAIKGTYIDKKCPFTG 64
Query: 49 TVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGD 107
V+IRGRIL+G KM R ++ ++YLH+++KY R+EK + N+ H+SPCFR V+ GD
Sbjct: 65 NVAIRGRILSGVVTKMKMQRATVICQDYLHYIRKYNRFEKCYKNMSVHLSPCFRDVQIGD 124
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V +G+C+PLSKT+ FNVLKV A G KK F
Sbjct: 125 IVTVGECQPLSKTMCFNVLKVTKA---TGTKKQF 155
>gi|5441535|emb|CAB46822.1| Ribosomal protein [Canis lupus familiaris]
Length = 110
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/110 (67%), Positives = 86/110 (78%), Gaps = 4/110 (3%)
Query: 33 EAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSN 92
EAIEGTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N
Sbjct: 1 EAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKN 60
Query: 93 IPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ H+SPCFR V GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 61 MSVHLSPCFRDVHIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 107
>gi|326914646|ref|XP_003203635.1| PREDICTED: 40S ribosomal protein S11-like, partial [Meleagris
gallopavo]
gi|449277332|gb|EMC85558.1| 40S ribosomal protein S11, partial [Columba livia]
Length = 109
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/109 (66%), Positives = 86/109 (78%), Gaps = 4/109 (3%)
Query: 34 AIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNI 93
AIEGTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+
Sbjct: 1 AIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNM 60
Query: 94 PAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 61 SVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 106
>gi|388515811|gb|AFK45967.1| unknown [Medicago truncatula]
Length = 81
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/81 (88%), Positives = 77/81 (95%), Gaps = 2/81 (2%)
Query: 66 MNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNV 125
MN+TI+VRRNYLHF+KKYQRYEKRHSNIPAH+SPCFRVKEGDHVIIGQCRPLSKTVRFNV
Sbjct: 1 MNKTIVVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVRFNV 60
Query: 126 LKVIPAGSS--GGAKKAFTAM 144
LKVIPAGSS GAKKAFT +
Sbjct: 61 LKVIPAGSSSGAGAKKAFTGV 81
>gi|346473705|gb|AEO36697.1| hypothetical protein [Amblyomma maculatum]
Length = 128
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/128 (59%), Positives = 90/128 (70%), Gaps = 15/128 (11%)
Query: 1 MAEQTEKAFLKQPG-----KGG---------NRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MAEQ E+AF KQP K G R++KS+GLGFKTPREAI GTYIDKKCPF
Sbjct: 1 MAEQVERAFQKQPTVFLNRKAGLPKGNPKRVQRYYKSVGLGFKTPREAIHGTYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKE 105
TG VSIRGRIL G KM RTI++RR+YLH+V+KY R+EKRH N+ H+SP FR V
Sbjct: 61 TGNVSIRGRILRGVVVKMKMQRTIVIRRDYLHYVRKYNRFEKRHRNMSVHLSPAFRDVAV 120
Query: 106 GDHVIIGQ 113
GD V +G+
Sbjct: 121 GDVVTVGE 128
>gi|195582644|ref|XP_002081136.1| GD25853 [Drosophila simulans]
gi|194193145|gb|EDX06721.1| GD25853 [Drosophila simulans]
Length = 115
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/113 (65%), Positives = 87/113 (76%), Gaps = 4/113 (3%)
Query: 30 TPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKR 89
+ R+AI+GTYIDKKCP+TG V IRGRIL G AKM RTI++RR+YLHFV+KY R+EKR
Sbjct: 3 SSRDAIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKR 62
Query: 90 HSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
H N+ H SP FR V+ GD V IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 63 HRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV---SKGQGAKKSF 112
>gi|443897272|dbj|GAC74613.1| serine/threonine protein phosphatase 2A, catalytic subunit
[Pseudozyma antarctica T-34]
Length = 281
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/105 (68%), Positives = 79/105 (75%)
Query: 37 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 96
G IDKKCP+TG VSIRGRIL G S KM RTII+RR YLHFV KY RYEKRH N+ AH
Sbjct: 174 GALIDKKCPWTGLVSIRGRILTGKVVSTKMTRTIIIRREYLHFVPKYSRYEKRHKNVAAH 233
Query: 97 ISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+SP FRV+ GD V +GQCRPLSKTVRFNVLKV S+ A K F
Sbjct: 234 VSPAFRVQVGDTVTVGQCRPLSKTVRFNVLKVSKNKSAEKAAKQF 278
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 30/49 (61%), Gaps = 10/49 (20%)
Query: 4 QTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDK 42
QTEKAF KQP R++K +GLGFKTPR AI+GTYI K
Sbjct: 9 QTEKAFQKQPIFQNSKAARKTTRDRRWYKDVGLGFKTPRAAIDGTYIGK 57
>gi|1220139|emb|CAA93817.1| ribosomal protein RS11 [Anopheles gambiae]
Length = 151
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 102/154 (66%), Gaps = 17/154 (11%)
Query: 1 MAEQTE-KAFLKQPG----------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGT 49
MA+Q +AF KQ G K G R SIGLGFKTP+EAI GTYIDKKCPFTG
Sbjct: 1 MADQQNIRAFQKQLGINLNRKNVSRKKGLRMHHSIGLGFKTPKEAITGTYIDKKCPFTGH 60
Query: 50 VSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDH 108
+SIRGRIL G + + +RR+YL F++KY +EKR+ N+ H+SPCFR V+ GD
Sbjct: 61 ISIRGRILTGVVRKCIV--LLYIRRDYLQFIRKYDTFEKRNRNMRLHLSPCFRDVEAGDI 118
Query: 109 VIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
V +G+CRPLSKTVRFNVLK G+KK F+
Sbjct: 119 VTLGECRPLSKTVRFNVLK---ESKMAGSKKKFS 149
>gi|330040274|ref|XP_003239831.1| 40S ribosomal protein S11 [Cryptomonas paramecium]
gi|327206756|gb|AEA38933.1| 40S ribosomal protein S11 [Cryptomonas paramecium]
Length = 137
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/119 (58%), Positives = 90/119 (75%), Gaps = 1/119 (0%)
Query: 11 KQPGKGGNRFW-KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRT 69
K P K N+ W K+IG+GFK + ++ Y DKKCPF G VSIRGRIL G S KM +
Sbjct: 14 KYPKKENNQCWYKTIGMGFKFSPKMVKNFYDDKKCPFKGNVSIRGRILKGMVISTKMKNS 73
Query: 70 IIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
IIVR++YL++ KY+R+E+RH+NIP H SP F++KEGD V IGQCRPLSKT+RFNVL++
Sbjct: 74 IIVRKDYLYYRSKYKRFERRHTNIPCHCSPYFKIKEGDLVTIGQCRPLSKTIRFNVLRI 132
>gi|444706322|gb|ELW47665.1| 14-3-3 protein sigma [Tupaia chinensis]
Length = 361
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 68/117 (58%), Positives = 89/117 (76%), Gaps = 1/117 (0%)
Query: 19 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
R++K+IGLGFKTP+EAIEGTYIDKKCPFTG VSIRGRIL+G KM RT ++ R+ LH
Sbjct: 238 RYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTTVIHRDDLH 297
Query: 79 FVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS 134
++ KY ++KRH N+ ++S CFR ++ D + +CRPLSKTV FNVLKV A ++
Sbjct: 298 YICKYNCFKKRHKNMSVYLSLCFRDIQISDIFTVDECRPLSKTVCFNVLKVTKAAAT 354
>gi|149445954|ref|XP_001507045.1| PREDICTED: 40S ribosomal protein S11-like [Ornithorhynchus
anatinus]
Length = 118
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/118 (60%), Positives = 88/118 (74%), Gaps = 16/118 (13%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+G R++K+IGLGFKTPREAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGEGAKEKLPRYYKNIGLGFKTPREAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR 102
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
>gi|71005596|ref|XP_757464.1| hypothetical protein UM01317.1 [Ustilago maydis 521]
gi|46096947|gb|EAK82180.1| hypothetical protein UM01317.1 [Ustilago maydis 521]
Length = 281
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/101 (70%), Positives = 77/101 (76%)
Query: 41 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 100
DKKCP+TG VSIRGRIL G S KM RTII+RR YLHFV KY RYEKRH N+ AH+SP
Sbjct: 178 DKKCPWTGLVSIRGRILTGKVVSTKMTRTIIIRREYLHFVPKYSRYEKRHKNVAAHVSPA 237
Query: 101 FRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
FRV+ GD V IGQCRPLSKTVRFNVLKV S+ A K F
Sbjct: 238 FRVQVGDTVTIGQCRPLSKTVRFNVLKVAKNKSAEKAAKQF 278
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 9/51 (17%)
Query: 1 MAEQTEKAFLKQP---------GKGGNRFWKSIGLGFKTPREAIEGTYIDK 42
+ QTEKAF KQP R++K +GLGFKTPR AI+GTYI K
Sbjct: 6 LGVQTEKAFQKQPIFQNSKAALKTRDRRWYKDVGLGFKTPRAAIDGTYIGK 56
>gi|157128597|ref|XP_001655147.1| 40S ribosomal protein S11 [Aedes aegypti]
gi|157128599|ref|XP_001655148.1| 40S ribosomal protein S11 [Aedes aegypti]
gi|108882211|gb|EAT46436.1| AAEL002372-PA [Aedes aegypti]
gi|108882212|gb|EAT46437.1| AAEL002372-PC [Aedes aegypti]
Length = 112
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/112 (60%), Positives = 81/112 (72%), Gaps = 10/112 (8%)
Query: 1 MAEQTEKAFLKQPG----------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
MA+Q E+AF KQ G K G R SIGLGFKTP+EAI GTYIDKKCPFTG +
Sbjct: 1 MADQNERAFQKQNGVNLNRKQVNKKKGLRLHHSIGLGFKTPKEAIAGTYIDKKCPFTGHI 60
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR 102
+IRGRIL G KM RTI++RR+YLHF++KY R+EKRH N+ H+SPCFR
Sbjct: 61 AIRGRILTGVVRKMKMQRTIVIRRDYLHFIRKYDRFEKRHRNLSVHLSPCFR 112
>gi|297705487|ref|XP_002829607.1| PREDICTED: 40S ribosomal protein S11 isoform 1 [Pongo abelii]
gi|297705491|ref|XP_002829609.1| PREDICTED: 40S ribosomal protein S11 isoform 3 [Pongo abelii]
gi|395751558|ref|XP_003779275.1| PREDICTED: 40S ribosomal protein S11 [Pongo abelii]
gi|149055980|gb|EDM07411.1| rCG54396, isoform CRA_b [Rattus norvegicus]
Length = 118
Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 70/118 (59%), Positives = 88/118 (74%), Gaps = 16/118 (13%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+ G R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR 102
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
>gi|38324703|gb|AAR16532.1| ribosomal protein S11 [Quercus petraea]
Length = 77
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 71/77 (92%), Positives = 72/77 (93%), Gaps = 1/77 (1%)
Query: 69 TIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
TIIVRR+YLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHV IGQCRPLSKTVRFNVLKV
Sbjct: 1 TIIVRRDYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVTIGQCRPLSKTVRFNVLKV 60
Query: 129 IPAGSSGGA-KKAFTAM 144
AGSSGGA KKAFT M
Sbjct: 61 TSAGSSGGAGKKAFTGM 77
>gi|162605740|ref|XP_001713385.1| 40S ribosomal protein S11 [Guillardia theta]
gi|13794317|gb|AAK39694.1|AF083031_51 40S ribosomal protein S11 [Guillardia theta]
Length = 138
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/104 (65%), Positives = 80/104 (76%)
Query: 25 GLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQ 84
GL K E ++IDKKCPFTG +SIRGRI+ G S KM +T+IVRR+YLH++ KY+
Sbjct: 22 GLDIKIRNEGKNISFIDKKCPFTGNISIRGRIMKGKIVSTKMEKTVIVRRDYLHWIPKYK 81
Query: 85 RYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
R+EKRH NIP H SP FRVKEGD V IGQCRPLSKTVRFNV+ V
Sbjct: 82 RFEKRHKNIPCHCSPLFRVKEGDFVTIGQCRPLSKTVRFNVIHV 125
>gi|432868006|ref|XP_004071365.1| PREDICTED: 40S ribosomal protein S11-like isoform 3 [Oryzias
latipes]
Length = 121
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 87/121 (71%), Gaps = 19/121 (15%)
Query: 1 MAE-QTEKAFLKQP--------------GKGGN----RFWKSIGLGFKTPREAIEGTYID 41
MA+ QTE+++ KQP GK G R+ KS+GLGFKTPR+AIEGTYID
Sbjct: 1 MADAQTERSYQKQPTIFQNKKRVLLTDGGKEGKEKLPRYHKSVGLGFKTPRDAIEGTYID 60
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
KKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCF
Sbjct: 61 KKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNLSVHLSPCF 120
Query: 102 R 102
R
Sbjct: 121 R 121
>gi|432868004|ref|XP_004071364.1| PREDICTED: 40S ribosomal protein S11-like isoform 2 [Oryzias
latipes]
Length = 132
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 87/121 (71%), Gaps = 19/121 (15%)
Query: 1 MAE-QTEKAFLKQP--------------GKGGN----RFWKSIGLGFKTPREAIEGTYID 41
MA+ QTE+++ KQP GK G R+ KS+GLGFKTPR+AIEGTYID
Sbjct: 1 MADAQTERSYQKQPTIFQNKKRVLLTDGGKEGKEKLPRYHKSVGLGFKTPRDAIEGTYID 60
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
KKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCF
Sbjct: 61 KKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNLSVHLSPCF 120
Query: 102 R 102
R
Sbjct: 121 R 121
>gi|116180434|ref|XP_001220066.1| 40S ribosomal protein S11 [Chaetomium globosum CBS 148.51]
gi|88185142|gb|EAQ92610.1| 40S ribosomal protein S11 [Chaetomium globosum CBS 148.51]
Length = 122
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/116 (59%), Positives = 82/116 (70%), Gaps = 15/116 (12%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP GKGG R++K +GLGF+TP AIEG YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLNSKTKVKSSRPGKGGRRWYKDVGLGFRTPTTAIEGQYIDKKCP 64
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
FTG VSIRGRIL GT S KM+RTII+RR YLH++ KY RYEKRH N+ AH+SP F
Sbjct: 65 FTGMVSIRGRILTGTVVSTKMHRTIIIRREYLHYIPKYNRYEKRHKNLAAHVSPGF 120
>gi|444724666|gb|ELW65265.1| 40S ribosomal protein S11 [Tupaia chinensis]
Length = 169
Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/158 (49%), Positives = 106/158 (67%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+ G R++K+IGLGF+TP+EAI+GTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKWVLLGETGKKMLPRYYKNIGLGFRTPKEAIDGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSI G IL+G KM RTI++ R+YLH++ K R++ H N+ H+S CFR V
Sbjct: 61 PFTGNVSIWGPILSGAVTKMKMQRTIVICRDYLHYIHKNNRFKMCHKNMSVHLSLCFREV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ G+ +++G+C+ LSKT+ NVLKV A G KK F
Sbjct: 121 QIGNIIMVGKCQLLSKTMCLNVLKVTKA---AGNKKQF 155
>gi|2275298|gb|AAB63874.1| 40S ribosomal protein S11 homolog [Schizosaccharomyces pombe]
Length = 93
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/93 (68%), Positives = 73/93 (78%)
Query: 25 GLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQ 84
GLGFKTP EAI+G Y+DKKCPF G VSIRGRIL GT S KM+RTII+RR YLHF+ KY
Sbjct: 1 GLGFKTPAEAIDGEYVDKKCPFVGQVSIRGRILTGTVVSTKMHRTIIIRREYLHFIPKYN 60
Query: 85 RYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPL 117
RYEKRH N+ AH+SP FR+ EGD V +GQ L
Sbjct: 61 RYEKRHKNLAAHVSPAFRINEGDVVTVGQLAVL 93
>gi|444517481|gb|ELV11591.1| 40S ribosomal protein S11 [Tupaia chinensis]
Length = 157
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 88/117 (75%), Gaps = 2/117 (1%)
Query: 19 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
R+ K+IGL FKTP+EAIEGTYIDKKCP TG VSI+G+IL+G KM RT I+RR+YLH
Sbjct: 35 RYHKNIGLDFKTPKEAIEGTYIDKKCPITGNVSIQGQILSGVVTKMKMQRTTIIRRDYLH 94
Query: 79 FVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS 134
++ +Y R+ K+H + H+ PCFR V+ GD + +G+C+PLSKT+ F +LK+ A +
Sbjct: 95 YIPEYNRF-KKHKTMSVHLFPCFRNVQIGDIIAVGECQPLSKTMHFIMLKITKAADT 150
>gi|27675918|ref|XP_223504.1| PREDICTED: 40S ribosomal protein S11-like [Rattus norvegicus]
gi|109500750|ref|XP_001060544.1| PREDICTED: 40S ribosomal protein S11-like [Rattus norvegicus]
Length = 158
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/125 (57%), Positives = 88/125 (70%), Gaps = 6/125 (4%)
Query: 19 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
R++KS G GFKTP+EAIEG+Y DKKCPFTG VSIRG IL+G KM RTI++ R+YLH
Sbjct: 35 RYYKSFGQGFKTPKEAIEGSYRDKKCPFTGNVSIRGWILSGFMTKMKMQRTIVIHRDYLH 94
Query: 79 FVKKYQRYEKRHSNIPAHISPCFR--VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGG 136
++ KY EK H N+P H S F+ + D V +G+CRPLSKTV+FNVLKV A G
Sbjct: 95 YILKYICIEKHHKNMPVHQSS-FQGCPDQCDIVTVGECRPLSKTVQFNVLKVTKA---AG 150
Query: 137 AKKAF 141
KK F
Sbjct: 151 TKKQF 155
>gi|119579837|gb|EAW59433.1| hCG1639857 [Homo sapiens]
Length = 329
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 79/108 (73%), Gaps = 2/108 (1%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
++I LGFKTP EAIEGTYIDKKCPFTG SIRGRIL G KM RT+I R+YLH+
Sbjct: 198 QNINLGFKTPEEAIEGTYIDKKCPFTGNASIRGRILFGMVTKMKMQRTVIC-RDYLHYTC 256
Query: 82 KYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 128
KY EK H N+ ++SPCFR ++ D + +G+C PLSK VRFNVLKV
Sbjct: 257 KYNHLEKHHKNMSVNLSPCFRDIQISDIITVGECWPLSKMVRFNVLKV 304
>gi|310771901|emb|CBH28892.1| 40S RIBOSOMAL PROTEIN S11 [Anncaliia algerae]
Length = 154
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/115 (58%), Positives = 80/115 (69%), Gaps = 2/115 (1%)
Query: 14 GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVR 73
K R K+IGLGF P+ AI GTYIDKKCPFTG VSIRGRIL G + K RTI+VR
Sbjct: 22 NKEQKRHVKNIGLGFVAPQTAINGTYIDKKCPFTGNVSIRGRILKGEVYKMKQERTIVVR 81
Query: 74 RNYLHFVKKYQRYEKRHSNIPAHISPCF--RVKEGDHVIIGQCRPLSKTVRFNVL 126
+NY H+V KY+R+E+R+S H+SPCF V GD V I + RPLSKT RF V+
Sbjct: 82 KNYFHYVPKYKRFERRNSKFSVHLSPCFLGLVNVGDIVTIAETRPLSKTKRFVVV 136
>gi|62647233|ref|XP_575471.1| PREDICTED: 40S ribosomal protein S11-like [Rattus norvegicus]
gi|109473480|ref|XP_001056309.1| PREDICTED: 40S ribosomal protein S11-like [Rattus norvegicus]
Length = 158
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 99/158 (62%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQPGKGGN---------------RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ TE+A+ QP N R+ K+IGLGFKT +EA EGTYIDKKC
Sbjct: 1 MADTHTERAYQNQPTISQNKKHVLLGETGKEKLPRYHKNIGLGFKTTKEASEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVK 104
PF G VSI+GR+L K+ RT+ +R++ LH+++KY R+EK+ N P +SPCFRV
Sbjct: 61 PFPGNVSIQGRMLFVVVKKMKLQRTVAIRQDCLHYIRKYNRFEKQPKNTPVRLSPCFRVV 120
Query: 105 E-GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ D V +G+CRPLSKTV +++ KV A G +K F
Sbjct: 121 QINDIVTVGECRPLSKTVFYSMCKVTTA---AGTRKQF 155
>gi|148703373|gb|EDL35320.1| mCG50938 [Mus musculus]
Length = 120
Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/118 (55%), Positives = 83/118 (70%), Gaps = 16/118 (13%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+ G R++K+IGLGFKTP+EAIEGTY DKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNNKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYRDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR 102
PF G VSIRG IL+G KM RT ++R +YLH+++KY R+EKRH N+ H+SPCFR
Sbjct: 61 PFNGNVSIRGPILSGVVTKMKMQRTFVIRGDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
>gi|323338852|gb|EGA80067.1| Rps11bp [Saccharomyces cerevisiae Vin13]
Length = 111
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 71/88 (80%)
Query: 14 GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVR 73
K R++K+ GLGFKTP+ AIEG+YIDKKCPFTG VSIRG+IL GT S KM+RTI++R
Sbjct: 19 SKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTKMHRTIVIR 78
Query: 74 RNYLHFVKKYQRYEKRHSNIPAHISPCF 101
R YLH++ KY RYEKRH N+P H+SP F
Sbjct: 79 RAYLHYIPKYNRYEKRHKNVPVHVSPAF 106
>gi|412993374|emb|CCO16907.1| 40S ribosomal protein S11 [Bathycoccus prasinos]
Length = 77
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/78 (79%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
Query: 66 MNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNV 125
MNRTII+R +YLHF+KKYQRYEKRHSNI AHISP FR KEGD V++GQCRPLSKTVRFNV
Sbjct: 1 MNRTIILRMDYLHFIKKYQRYEKRHSNIAAHISPAFRCKEGDKVVVGQCRPLSKTVRFNV 60
Query: 126 LKVIPAGSSGGAKKAFTA 143
LKVIPAG+S G K F A
Sbjct: 61 LKVIPAGASSG--KGFVA 76
>gi|3599952|gb|AAC35458.1| RPYS18 [Rhizopus oryzae]
Length = 103
Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 6/104 (5%)
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
KKCPF G V+I+GRIL G S KM RT++VRR+YLH++ KY RYEKRH NI AH+SP F
Sbjct: 1 KKCPFVGEVNIQGRILTGVVVSTKMKRTLVVRRDYLHYIPKYNRYEKRHKNISAHVSPAF 60
Query: 102 R---VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
++ GD V IGQCRPLSKTVRFNV+KV + G KAF
Sbjct: 61 DNQAIQVGDMVTIGQCRPLSKTVRFNVIKV---SKAKGTAKAFN 101
>gi|209735892|gb|ACI68815.1| 40S ribosomal protein S11 [Salmo salar]
Length = 140
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 84/123 (68%), Gaps = 25/123 (20%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN-------RFWKSIGLGFKTPREAIEGTYID 41
MA+ QTE+A+ KQP G+GG R+ KS+GLGFKTPREAI+GTYID
Sbjct: 1 MADAQTERAYQKQPTIFQNKKRVLVGEGGKEAKEKLPRYHKSVGLGFKTPREAIDGTYID 60
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRH------SNIPA 95
KKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKR S++P+
Sbjct: 61 KKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRPRTCRSISHLPS 120
Query: 96 HIS 98
S
Sbjct: 121 ETS 123
>gi|209731494|gb|ACI66616.1| 40S ribosomal protein S11 [Salmo salar]
Length = 144
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 78/109 (71%), Gaps = 19/109 (17%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN-------RFWKSIGLGFKTPREAIEGTYID 41
MA+ QTE+A+ KQP G+GG R+ KS+GLGFKTPREAI+GTYID
Sbjct: 1 MADAQTERAYQKQPTIFQNKKRVLVGEGGKEAKEKLPRYHKSVGLGFKTPREAIDGTYID 60
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRH 90
KKCPFTG VS RGRIL+G KM RTI++RR+YLH+++KY R+EKRH
Sbjct: 61 KKCPFTGNVSFRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRH 109
>gi|281500821|pdb|3JYV|Q Chain Q, Structure Of The 40s Rrna And Proteins And PE TRNA FOR
EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces
Lanuginosus Ribosome At 8.9a Resolution
Length = 80
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 64/80 (80%)
Query: 53 RGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
RG+IL GT S KM+RTI++RR YLH++ KY RYEKRH N+P H+SP FRV+ GD V +G
Sbjct: 1 RGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFRVQVGDIVTVG 60
Query: 113 QCRPLSKTVRFNVLKVIPAG 132
QCRP+SKTVRFNV+KV A
Sbjct: 61 QCRPISKTVRFNVVKVSAAA 80
>gi|115460510|ref|NP_001053855.1| Os04g0613500 [Oryza sativa Japonica Group]
gi|113565426|dbj|BAF15769.1| Os04g0613500, partial [Oryza sativa Japonica Group]
Length = 80
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/80 (80%), Positives = 65/80 (81%), Gaps = 15/80 (18%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAK 65
FTGTVSIRGRI+AGTCHSAK
Sbjct: 61 FTGTVSIRGRIIAGTCHSAK 80
>gi|161899327|ref|XP_001712890.1| ribosomal protein S11 [Bigelowiella natans]
gi|75756384|gb|ABA27278.1| ribosomal protein S11 [Bigelowiella natans]
Length = 119
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 66/89 (74%)
Query: 40 IDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISP 99
IDKKCPF G +++RGRIL G KM T+I+R +YL F+KKY R+ KRH NIPAH+S
Sbjct: 23 IDKKCPFYGKINLRGRILRGKVRKIKMKSTVIIRIDYLKFLKKYNRFVKRHKNIPAHLSN 82
Query: 100 CFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
K GD VII +CRP+SKTVRFNV+KV
Sbjct: 83 LLTCKVGDIVIIAECRPISKTVRFNVIKV 111
>gi|218884477|ref|YP_002428859.1| 30S ribosomal protein S17P [Desulfurococcus kamchatkensis 1221n]
gi|218766093|gb|ACL11492.1| 30S ribosomal protein S17P [Desulfurococcus kamchatkensis 1221n]
Length = 116
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 72/112 (64%), Gaps = 3/112 (2%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
+IG+ P E I D KCP+ G + +RG IL G KM RT++VR YLH+VKK
Sbjct: 8 NIGVTGINPPEKICN---DPKCPWHGRLKVRGVILTGVVAKKKMQRTVVVRHEYLHYVKK 64
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS 134
Y RYEKRH NI AH+ PC VKEGD V+IG+ RPL+KTV F VL VI G
Sbjct: 65 YMRYEKRHRNIHAHLPPCIDVKEGDTVVIGETRPLAKTVAFVVLGVIKRGGE 116
>gi|390938982|ref|YP_006402720.1| 30S ribosomal protein S17 [Desulfurococcus fermentans DSM 16532]
gi|390192089|gb|AFL67145.1| ribosomal protein S17P [Desulfurococcus fermentans DSM 16532]
Length = 116
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 72/112 (64%), Gaps = 3/112 (2%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
+IG+ P E I D KCP+ G + +RG IL G KM RT++VR YLH+VKK
Sbjct: 8 NIGVMGINPPEKICN---DPKCPWHGRLKVRGVILTGVVAKKKMQRTVVVRHEYLHYVKK 64
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS 134
Y RYEKRH NI AH+ PC VKEGD V+IG+ RPL+KTV F VL VI G
Sbjct: 65 YMRYEKRHRNIHAHLPPCIDVKEGDTVVIGETRPLAKTVAFVVLGVIKRGGE 116
>gi|440903364|gb|ELR54035.1| hypothetical protein M91_21397 [Bos grunniens mutus]
Length = 157
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 90/151 (59%), Gaps = 18/151 (11%)
Query: 1 MAE-QTEKAFLKQPGKGGNR---------------FWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE A KQP N+ F K+I LGFKTP+EAIEG YIDKKC
Sbjct: 1 MADIQTEHACQKQPTIFQNKKRVLLRETGKEKFPQFHKNISLGFKTPKEAIEGNYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
FTG SI+G+IL+ + ++I +YL +++KY R+E+ H N+ H+SPCFR +
Sbjct: 61 RFTGNGSIQGQILSSDQNEDGEGHSLIC-PDYLRYIRKYNRFERGHRNMSVHLSPCFRDI 119
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS 134
+ GD +G C P SKTV F+V KV A +
Sbjct: 120 QIGDIFTVGTCWPQSKTVPFHVRKVTKAADT 150
>gi|296486530|tpg|DAA28643.1| TPA: ribosomal protein S11-like [Bos taurus]
Length = 157
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 90/151 (59%), Gaps = 18/151 (11%)
Query: 1 MAE-QTEKAFLKQPGKGGNR---------------FWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE A KQP N+ F K+I LGFKTP+EAIEG YIDKKC
Sbjct: 1 MADIQTEHACQKQPTIFQNKKRVLLRETGKEKFPQFHKNISLGFKTPKEAIEGNYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
FTG SI+G+IL+ + ++I +YL +++KY R+E+ H N+ H+SPCFR +
Sbjct: 61 RFTGNGSIQGQILSSDQNEDGEGHSLIC-PDYLRYIRKYNRFERGHRNMSVHLSPCFRDI 119
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS 134
+ GD +G C P SKTV F+V KV A +
Sbjct: 120 QIGDIFTVGTCWPRSKTVPFHVRKVTKAADT 150
>gi|193875772|gb|ACF24522.1| 40S ribosomal protein S11 [Gymnochlora stellata]
Length = 111
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 74/109 (67%), Gaps = 2/109 (1%)
Query: 21 WKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
+K I + K P+ I DKKCPF VS+RGRIL G S KM TIIVR +Y+ ++
Sbjct: 2 FKHISIKIKPPK--INKFIRDKKCPFYSNVSLRGRILLGKIKSNKMKSTIIVRVDYMVYL 59
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KKY R+ K+HSN+PAHIS F K+GD V I + RPLSKT+RF V+KVI
Sbjct: 60 KKYNRFIKKHSNVPAHISSGFECKKGDRVYIAESRPLSKTIRFCVIKVI 108
>gi|378755047|gb|EHY65074.1| SSU ribosomal protein S17P [Nematocida sp. 1 ERTm2]
Length = 163
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 74/115 (64%), Gaps = 2/115 (1%)
Query: 14 GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVR 73
K R K+IGLG++TP A GTYIDKKCPFT V+IRG I G S K RT +V
Sbjct: 31 NKTPRRLVKNIGLGYETPITATNGTYIDKKCPFTSDVTIRGTIFKGEIVSLKQTRTAVVV 90
Query: 74 RNYLHFVKKYQRYEKRHSNIPAHISPCFR--VKEGDHVIIGQCRPLSKTVRFNVL 126
+ YLH+ KY RYE+R++ H+SPC+ V+ G V+ G+ RPLSKT +F V+
Sbjct: 91 KRYLHYHPKYMRYERRNTRFNVHLSPCWDGLVEVGSKVVCGETRPLSKTKKFAVI 145
>gi|302507852|ref|XP_003015887.1| hypothetical protein ARB_06199 [Arthroderma benhamiae CBS 112371]
gi|291179455|gb|EFE35242.1| hypothetical protein ARB_06199 [Arthroderma benhamiae CBS 112371]
Length = 77
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 63/76 (82%), Gaps = 2/76 (2%)
Query: 66 MNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNV 125
M+RT+++RR YLH++ KY RYEKRH N+ AH+SP FRV+EGD V +GQCRPLSKTVRFNV
Sbjct: 1 MHRTLVIRREYLHYIPKYSRYEKRHKNLAAHVSPAFRVEEGDQVTVGQCRPLSKTVRFNV 60
Query: 126 LKVIPAGSSGGAKKAF 141
L+V+P +G A KAF
Sbjct: 61 LRVLP--RTGKAVKAF 74
>gi|49258835|pdb|1S1H|Q Chain Q, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From
Yeast Obtained By Docking Atomic Models For Rna And
Protein Components Into A 11.7 A Cryo-Em Map. This File,
1s1h, Contains 40s Subunit. The 60s Ribosomal Subunit Is
In File 1s1i
Length = 76
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 49/74 (66%), Positives = 61/74 (82%)
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 114
+IL GT S KM+RTI++RR YLH++ KY RYEKRH N+P H+SP FRV+ GD V +GQC
Sbjct: 1 KILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFRVQVGDIVTVGQC 60
Query: 115 RPLSKTVRFNVLKV 128
RP+SKTVRFNV+KV
Sbjct: 61 RPISKTVRFNVVKV 74
>gi|387593449|gb|EIJ88473.1| ribosomal protein S17P [Nematocida parisii ERTm3]
gi|387597106|gb|EIJ94726.1| ribosomal protein S17P [Nematocida parisii ERTm1]
Length = 215
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 74/115 (64%), Gaps = 2/115 (1%)
Query: 14 GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVR 73
K R K+IGLG++TP A GTYIDKKCPFT V+IRG I G S K RT +V
Sbjct: 83 NKTARRQVKNIGLGYETPITATNGTYIDKKCPFTSDVTIRGTIFKGEIVSLKQTRTAVVV 142
Query: 74 RNYLHFVKKYQRYEKRHSNIPAHISPCFR--VKEGDHVIIGQCRPLSKTVRFNVL 126
+ YLH+ KY RYE+R++ H+SPC+ V+ G V+ G+ RPLSKT +F V+
Sbjct: 143 KRYLHYHPKYMRYERRNTRFNVHLSPCWDGLVEVGSKVVCGETRPLSKTKKFAVI 197
>gi|74580680|sp|Q8TW21.1|RS17_METKA RecName: Full=30S ribosomal protein S17P
gi|19887814|gb|AAM02430.1| Ribosomal protein S17 [Methanopyrus kandleri AV19]
Length = 118
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 71/114 (62%), Gaps = 4/114 (3%)
Query: 16 GGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRN 75
G R K IGLG K PR + D CPF G + +RG IL G S +M++T+IV R
Sbjct: 3 GEYRMAKDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVERE 58
Query: 76 YLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
Y + +KY+R+E+R S IPAH PC +EGD V I +CRPLSKT F V++V+
Sbjct: 59 YYRYDRKYERWERRRSRIPAHNPPCIDAQEGDKVRIAECRPLSKTKSFVVIEVL 112
>gi|19074141|ref|NP_584747.1| 40S RIBOSOMAL PROTEIN S11 [Encephalitozoon cuniculi GB-M1]
gi|19068783|emb|CAD25251.1| 40S RIBOSOMAL PROTEIN S11 [Encephalitozoon cuniculi GB-M1]
gi|449329047|gb|AGE95322.1| 40S ribosomal protein S11 [Encephalitozoon cuniculi]
Length = 156
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 69/114 (60%), Gaps = 2/114 (1%)
Query: 27 GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRY 86
GFK P A YIDKKCPFTG V++RGR+ G K +TI+V NY+H+ KKY+RY
Sbjct: 38 GFKAPETAYTRQYIDKKCPFTGDVNVRGRLFKGVVKKMKAEKTIVVVANYVHYSKKYKRY 97
Query: 87 EKRHSNIPAHISPCFR--VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAK 138
+RH+N H+SPCF + GD VI G+ RPLSKT VL I G K
Sbjct: 98 SRRHTNFSVHMSPCFEGMINVGDTVICGETRPLSKTKSSVVLGYIKKALPGSFK 151
>gi|402467075|gb|EJW02439.1| archaeal ribosomal protein S17P [Edhazardia aedis USNM 41457]
Length = 152
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 83/139 (59%), Gaps = 10/139 (7%)
Query: 1 MAEQTEK--AFLKQ------PGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSI 52
MAE + K +F +Q P K RF + +G G KTP AI +YIDKKCPFTG + I
Sbjct: 1 MAEYSTKLKSFPQQSQSPYTPYKTQKRFVRKLGFGIKTPETAINSSYIDKKCPFTGEIKI 60
Query: 53 RGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF--RVKEGDHVI 110
+ GT K +TI+VR+NYL + KY+RYE+R++ H+SPCF ++ GD+V
Sbjct: 61 IPHFIKGTVIKMKNEKTIVVRKNYLFYHTKYKRYERRNTKFNVHLSPCFFGLIQVGDNVT 120
Query: 111 IGQCRPLSKTVRFNVLKVI 129
+ RPLSKT F V+ +
Sbjct: 121 CAETRPLSKTKYFVVVDYV 139
>gi|320101357|ref|YP_004176949.1| 30S ribosomal protein S17 [Desulfurococcus mucosus DSM 2162]
gi|319753709|gb|ADV65467.1| SSU ribosomal protein S17P [Desulfurococcus mucosus DSM 2162]
Length = 116
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 5/102 (4%)
Query: 23 SIGL-GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
IG+ G K P + E D KCP+ G + +RG +L G KM RT++VR YLH+V+
Sbjct: 8 DIGIPGVKPPEKTCE----DPKCPWHGHLKVRGVVLTGVVVKKKMQRTVVVRHEYLHYVR 63
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRF 123
KY RYEKRH NI AH+ PC VKEGD V+IG+ RPL+KTV F
Sbjct: 64 KYMRYEKRHRNIHAHLPPCIEVKEGDVVVIGETRPLAKTVAF 105
>gi|396081207|gb|AFN82825.1| 40S ribosomal protein S11 [Encephalitozoon romaleae SJ-2008]
Length = 156
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 69/114 (60%), Gaps = 2/114 (1%)
Query: 27 GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRY 86
GFK P A YIDKKCPFTG V++RGRI G K +TI+V NY+H+ KKY+RY
Sbjct: 38 GFKAPETAYTRQYIDKKCPFTGDVNVRGRIFKGVVKKMKAEKTIVVVVNYVHYSKKYKRY 97
Query: 87 EKRHSNIPAHISPCFR--VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAK 138
+RH+N H+SPCF + GD V+ G+ RPLSKT VL + G K
Sbjct: 98 SRRHTNFSVHMSPCFEGMINVGDVVMCGETRPLSKTKSSVVLGYVKKALPGSFK 151
>gi|298674793|ref|YP_003726543.1| 30S ribosomal protein S17 [Methanohalobium evestigatum Z-7303]
gi|298287781|gb|ADI73747.1| ribosomal protein S17P [Methanohalobium evestigatum Z-7303]
Length = 109
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 69/108 (63%), Gaps = 4/108 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
K IGL ++P + + D CPF G +S+RG++L GT S ++T+ ++RNY
Sbjct: 1 MTKDIGLDVQSPSKECD----DTNCPFHGNLSVRGQVLVGTVISDDRDKTVTIQRNYERL 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
+KKYQRYEKRHS I AH PC KEGD V I +CRPLSKT F V++
Sbjct: 57 IKKYQRYEKRHSKISAHNPPCIDAKEGDVVKIAECRPLSKTKSFVVVE 104
>gi|401825984|ref|XP_003887086.1| 40S ribosomal protein S11 [Encephalitozoon hellem ATCC 50504]
gi|392998244|gb|AFM98105.1| 40S ribosomal protein S11 [Encephalitozoon hellem ATCC 50504]
Length = 156
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 64/96 (66%), Gaps = 2/96 (2%)
Query: 27 GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRY 86
GFK P A YIDKKCPFTG V++RGRI G K +TI+V NY+H+ KKY+RY
Sbjct: 38 GFKAPETAYTRQYIDKKCPFTGDVNVRGRIFKGVVKKMKAEKTIVVVVNYVHYSKKYKRY 97
Query: 87 EKRHSNIPAHISPCFR--VKEGDHVIIGQCRPLSKT 120
+RH+N H+SPCF + GD V+ G+ RPLSKT
Sbjct: 98 SRRHTNFSVHMSPCFEGMISVGDTVMCGETRPLSKT 133
>gi|161485662|ref|NP_614500.2| 30S ribosomal protein S17 [Methanopyrus kandleri AV19]
Length = 112
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 69/108 (63%), Gaps = 4/108 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
K IGLG K PR + D CPF G + +RG IL G S +M++T+IV R Y + +
Sbjct: 3 KDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVEREYYRYDR 58
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+R+E+R S IPAH PC +EGD V I +CRPLSKT F V++V+
Sbjct: 59 KYERWERRRSRIPAHNPPCIDAQEGDKVRIAECRPLSKTKSFVVIEVL 106
>gi|303388950|ref|XP_003072708.1| 40S ribosomal protein S11 [Encephalitozoon intestinalis ATCC 50506]
gi|303301850|gb|ADM11348.1| 40S ribosomal protein S11 [Encephalitozoon intestinalis ATCC 50506]
Length = 156
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 2/114 (1%)
Query: 27 GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRY 86
GFK P A YIDKKCPFTG +++RGR G K +TI+V NY+H+ KKY+RY
Sbjct: 38 GFKAPETAYTRQYIDKKCPFTGDINVRGRTFKGIVKKMKAEKTIVVVVNYVHYSKKYKRY 97
Query: 87 EKRHSNIPAHISPCFR--VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAK 138
+RH+N H+SPCF + GD VI G+ RPLSKT VL + G K
Sbjct: 98 SRRHTNFSVHMSPCFEGMINVGDTVICGETRPLSKTKSSVVLGYTKKATPGSFK 151
>gi|238882557|gb|EEQ46195.1| 40S ribosomal protein S11 [Candida albicans WO-1]
Length = 76
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 66 MNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNV 125
M+RTII+RR+YLH+V KY RYEKRH N+ AH+SP FRV+EGD V +GQCRP+SKTVRFNV
Sbjct: 1 MHRTIIIRRDYLHYVPKYNRYEKRHKNVAAHVSPAFRVEEGDVVTVGQCRPISKTVRFNV 60
Query: 126 LKVIPAGSSGGAK 138
LKV AG+S K
Sbjct: 61 LKV-SAGASRSKK 72
>gi|429962871|gb|ELA42415.1| archaeal ribosomal protein S17P [Vittaforma corneae ATCC 50505]
Length = 158
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 9 FLKQPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNR 68
+ + K RF K +K P AI TY D+KCPFTG V++RGRI G K +
Sbjct: 22 YATEEEKLKTRFCKETAGNYKAPETAINATYYDRKCPFTGEVNVRGRIFKGKVIKMKAEK 81
Query: 69 TIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF--RVKEGDHVIIGQCRPLSKTVRFNVL 126
TI+VR +YLH+ KY+R+ +R+S I H+SPCF V GD V+ G+ +PLSKT V+
Sbjct: 82 TIVVRIDYLHYDSKYKRFARRNSKINVHLSPCFLGLVNLGDTVVCGETKPLSKTKSSAVI 141
Query: 127 KVIPAGSSGGAK 138
V A + K
Sbjct: 142 GVEKAEDTKSIK 153
>gi|169806178|ref|XP_001827834.1| SSU ribosomal protein S17P [Enterocytozoon bieneusi H348]
gi|161779282|gb|EDQ31305.1| SSU ribosomal protein S17P [Enterocytozoon bieneusi H348]
Length = 157
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 76/128 (59%), Gaps = 14/128 (10%)
Query: 6 EKAFLKQPGKG-----------GNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRG 54
EK F KQ G NR K+IG G KTP+ A E YIDKKCPFTG + +RG
Sbjct: 9 EKVFPKQDGVKHNPYASSEMILKNRIVKNIGFGIKTPQTAYEN-YIDKKCPFTGDIVVRG 67
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR--VKEGDHVIIG 112
RI G K +T++V YL + KKY+RY +R++ I H+SPC+ V+ GD VI G
Sbjct: 68 RIFTGEVIKMKAEKTVVVEIKYLFYDKKYKRYARRNTKINVHLSPCWNGLVQLGDTVICG 127
Query: 113 QCRPLSKT 120
+ RP+SKT
Sbjct: 128 ETRPISKT 135
>gi|383319763|ref|YP_005380604.1| 30S ribosomal protein S17 [Methanocella conradii HZ254]
gi|379321133|gb|AFD00086.1| SSU ribosomal protein S17P [Methanocella conradii HZ254]
Length = 110
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 68/107 (63%), Gaps = 4/107 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
K IGL + P A D CPF G +S+RG+IL G SAKM++T++V+R YL
Sbjct: 6 KDIGLNVQAPASAC----TDPHCPFHGHLSVRGQILDGVVVSAKMDKTVVVQREYLKRNN 61
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
KY RYEKR S I AH PC KEGD V+I +CRPLSKT F V++V
Sbjct: 62 KYDRYEKRRSKIHAHNPPCINAKEGDKVVIAECRPLSKTKTFVVVEV 108
>gi|389860658|ref|YP_006362898.1| 30S ribosomal protein S17 [Thermogladius cellulolyticus 1633]
gi|388525562|gb|AFK50760.1| 30S ribosomal protein S17P [Thermogladius cellulolyticus 1633]
Length = 107
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 72/106 (67%), Gaps = 4/106 (3%)
Query: 27 GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRY 86
G + P E D KCP+ G + +RG IL G SAKM +T++VR +YL++ KY+RY
Sbjct: 5 GVEPPSETCN----DPKCPWHGHLKVRGVILTGVVKSAKMQKTVVVRHDYLYYDPKYKRY 60
Query: 87 EKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAG 132
E+RH +I AH+ PC +V+EGD V+IG+ RPL+K+V F VL V+ G
Sbjct: 61 ERRHKHIHAHLPPCIKVREGDVVVIGETRPLAKSVSFVVLGVVKKG 106
>gi|300175266|emb|CBK20577.2| unnamed protein product [Blastocystis hominis]
Length = 81
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/70 (74%), Positives = 56/70 (80%)
Query: 66 MNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNV 125
M RTIIVRR+YL +VKKY+RYEKRH NIPAH SPCF VKEGD V IGQCRPLSKTVRFNV
Sbjct: 1 MERTIIVRRDYLRYVKKYRRYEKRHRNIPAHCSPCFDVKEGDIVTIGQCRPLSKTVRFNV 60
Query: 126 LKVIPAGSSG 135
+ S G
Sbjct: 61 IDHESQKSKG 70
>gi|340500483|gb|EGR27356.1| hypothetical protein IMG5_197410 [Ichthyophthirius multifiliis]
Length = 143
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 74/118 (62%), Gaps = 13/118 (11%)
Query: 1 MAEQTEKAFLKQPG-------------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFT 47
M Q E+AF KQ G G R++K+IGLGFKTP+EAI+G YIDKKCPFT
Sbjct: 1 MENQHERAFQKQDGIFLNSKKVLQKKTAAGVRYYKNIGLGFKTPKEAIDGHYIDKKCPFT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
+SIRG+++ G S KMNRT+I+RR+YLH+V+ +K + + F++K+
Sbjct: 61 SNLSIRGKLIKGLVISTKMNRTVIIRRDYLHYVRNTTDMKKDTETLLSMYPHAFKLKK 118
>gi|115475293|ref|NP_001061243.1| Os08g0207000 [Oryza sativa Japonica Group]
gi|113623212|dbj|BAF23157.1| Os08g0207000, partial [Oryza sativa Japonica Group]
Length = 55
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/54 (92%), Positives = 52/54 (96%)
Query: 90 HSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTA 143
HSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNV+KVIPAGS+GG KKAF A
Sbjct: 1 HSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVIKVIPAGSTGGGKKAFIA 54
>gi|300708604|ref|XP_002996478.1| hypothetical protein NCER_100443 [Nosema ceranae BRL01]
gi|239605783|gb|EEQ82807.1| hypothetical protein NCER_100443 [Nosema ceranae BRL01]
Length = 158
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 73/115 (63%), Gaps = 2/115 (1%)
Query: 27 GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRY 86
GF P+ AI+ TY+DKKCPFTG V + G+I G + K ++TI+VR N L + KKY+R+
Sbjct: 40 GFVVPKTAIDATYVDKKCPFTGDVRVTGKIFEGVVYKMKADKTIVVRINRLVYNKKYRRF 99
Query: 87 EKRHSNIPAHISPCFR--VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKK 139
+RH+N+ +H+SPCF + GD VI G+ R LSKT VL + G K+
Sbjct: 100 GRRHTNVSSHMSPCFEGLINVGDTVICGETRRLSKTKSSVVLDFKKKSTEGNFKR 154
>gi|294496008|ref|YP_003542501.1| 30S ribosomal protein S17P [Methanohalophilus mahii DSM 5219]
gi|292667007|gb|ADE36856.1| SSU ribosomal protein S17P [Methanohalophilus mahii DSM 5219]
Length = 109
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 68/108 (62%), Gaps = 4/108 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
++IGL P E + D CPF GT+ +RG++L+G S M+RT++++R Y F
Sbjct: 1 MARNIGLDVPEPSEECD----DINCPFHGTLPVRGQVLSGKVVSDSMDRTVVIQRKYDKF 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
+ KYQRYEKR S I AH PC KEGD V I +CRPLSKT + V+K
Sbjct: 57 INKYQRYEKRQSKIHAHNPPCIDAKEGDIVTIAECRPLSKTKAYVVVK 104
>gi|147919324|ref|YP_686940.1| 30S ribosomal protein S17P [Methanocella arvoryzae MRE50]
gi|121685296|sp|Q0W1X9.1|RS17_UNCMA RecName: Full=30S ribosomal protein S17P
gi|110622336|emb|CAJ37614.1| 30S ribosomal protein S17P [Methanocella arvoryzae MRE50]
Length = 111
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 69/109 (63%), Gaps = 4/109 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
K IGL K P+ D +CPF G++++RG+I GT SAKM+++++V R YL
Sbjct: 1 MAKDIGLNVKAPKTECN----DPQCPFHGSLAVRGQIFEGTVVSAKMSKSVVVSREYLKR 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
KY RYEKR S + AH PC KEGD V+I +CRPLSKT F V++V
Sbjct: 57 DLKYDRYEKRRSKLHAHNPPCINAKEGDKVVIAECRPLSKTKTFVVVEV 105
>gi|207347752|gb|EDZ73830.1| YBR048Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 77
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 61/76 (80%), Gaps = 2/76 (2%)
Query: 66 MNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNV 125
M+RTI++RR YLH++ KY RYEKRH N+P H+SP FRV+ GD V +GQCRP+SKTVRFNV
Sbjct: 1 MHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFRVQVGDIVTVGQCRPISKTVRFNV 60
Query: 126 LKVIPAGSSGGAKKAF 141
+KV + ++G A K F
Sbjct: 61 VKV--SAAAGKANKQF 74
>gi|20906691|gb|AAM31829.1| SSU ribosomal protein S17P [Methanosarcina mazei Go1]
Length = 156
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 68/118 (57%), Gaps = 4/118 (3%)
Query: 10 LKQPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRT 69
LK G + IGL P E + Y CPF GT+ +RG+IL GT S+KM+ T
Sbjct: 38 LKSYVNGAKFMARDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNT 93
Query: 70 IIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
+++ R Y+ V KYQRYEKR S I AH C K GD V I +CRP+SKT F V+K
Sbjct: 94 VVIERQYMKMVSKYQRYEKRRSKIHAHNPACISAKVGDIVTIVECRPISKTKSFVVVK 151
>gi|347524205|ref|YP_004781775.1| 30S ribosomal protein S17P [Pyrolobus fumarii 1A]
gi|343461087|gb|AEM39523.1| ribosomal protein S17P [Pyrolobus fumarii 1A]
Length = 117
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 72/111 (64%), Gaps = 5/111 (4%)
Query: 20 FWKSIGL-GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
+ K +G+ G K P E T DKKCP+ G V +RG IL G AKM T++V R YL+
Sbjct: 3 YVKDVGIPGLKPP----ERTCNDKKCPWHGRVRVRGLILKGVVVKAKMKNTVVVEREYLY 58
Query: 79 FVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
+ +KY+RYE+R S I AH PC KEGD V+IG+ RPL+KTV F VL V+
Sbjct: 59 YDRKYRRYERRTSRIHAHNPPCINAKEGDIVVIGETRPLAKTVHFVVLAVV 109
>gi|354610528|ref|ZP_09028484.1| ribosomal protein S17P [Halobacterium sp. DL1]
gi|353195348|gb|EHB60850.1| ribosomal protein S17P [Halobacterium sp. DL1]
Length = 109
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 68/112 (60%), Gaps = 4/112 (3%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
+IGL P EGT D+ CPF G++S+RG++L G S M++TI+V R Y FV K
Sbjct: 2 AIGLNVTEP----EGTCTDENCPFHGSLSVRGQVLEGEVASTDMDKTIVVEREYDVFVPK 57
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS 134
Y RY KR S +PAH CF + +GD V I + RPLSKT V++V G +
Sbjct: 58 YDRYMKRRSRVPAHAPECFDIADGDTVSIAETRPLSKTKSHVVVEVTDGGDA 109
>gi|73696327|gb|AAZ80940.1| ribosomal protein S11 [Macaca mulatta]
Length = 90
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 56/64 (87%)
Query: 19 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
R +K+IGLGFKTP+EAIEGTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH
Sbjct: 27 RHYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLH 86
Query: 79 FVKK 82
+++K
Sbjct: 87 YIRK 90
>gi|381218018|gb|AFG17068.1| 40S ribosomal protein S11, partial [Pimephales promelas]
Length = 78
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 61/78 (78%), Gaps = 4/78 (5%)
Query: 65 KMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRF 123
KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V GD V +G+CRPLSKTVRF
Sbjct: 1 KMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVTVGDIVTVGECRPLSKTVRF 60
Query: 124 NVLKVIPAGSSGGAKKAF 141
NVLKV A GAKK F
Sbjct: 61 NVLKVTKA---AGAKKQF 75
>gi|78558068|gb|ABB46361.1| ribosomal protein S11 [Ovis aries]
Length = 88
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 56/64 (87%)
Query: 19 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
R++K+IGLGFKTP+EAIEGTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH
Sbjct: 25 RYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLH 84
Query: 79 FVKK 82
++ K
Sbjct: 85 YIWK 88
>gi|124484918|ref|YP_001029534.1| 30S ribosomal protein S17P [Methanocorpusculum labreanum Z]
gi|166219709|sp|A2SPL1.1|RS17_METLZ RecName: Full=30S ribosomal protein S17P
gi|124362459|gb|ABN06267.1| SSU ribosomal protein S17P [Methanocorpusculum labreanum Z]
Length = 108
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 4/110 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
K+IGL P + + D CPF G++ +RG+++ G S +M T++V RN+LH
Sbjct: 1 MAKNIGLNVAVPEKDCD----DVNCPFHGSLPVRGQVITGKVVSERMQGTVVVERNFLHK 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
V+KY RYEKR S I AH++PC K GD V I +CRPL+KT + V++VI
Sbjct: 57 VQKYDRYEKRSSKIHAHMAPCLNAKIGDEVKIAECRPLNKTTSYVVVEVI 106
>gi|172051086|gb|ACB70318.1| 40S ribosomal protein S11 [Ornithodoros coriaceus]
Length = 79
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 61/81 (75%), Gaps = 4/81 (4%)
Query: 65 KMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRF 123
KM RTI++RR+YLHFV+KY R+EKRH N+ H+SP FR V GD V +G+CRPLSKTVRF
Sbjct: 2 KMQRTIVIRRDYLHFVRKYNRFEKRHRNMSVHLSPAFRDVALGDVVTVGECRPLSKTVRF 61
Query: 124 NVLKVIPAGSSGGAKKAFTAM 144
NVLKV A G+KK F M
Sbjct: 62 NVLKVTKA---AGSKKQFQKM 79
>gi|296242594|ref|YP_003650081.1| 30S ribosomal protein S17 [Thermosphaera aggregans DSM 11486]
gi|296095178|gb|ADG91129.1| SSU ribosomal protein S17P [Thermosphaera aggregans DSM 11486]
Length = 117
Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 70/108 (64%), Gaps = 5/108 (4%)
Query: 23 SIGL-GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+IGL G P + E D KCP+ G V +RG +L G K + ++VR +YLH+VK
Sbjct: 8 NIGLAGLNPPEKTCE----DPKCPWHGHVKVRGVVLTGVVSKRKAHAMVVVRHDYLHYVK 63
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
K+ RYEKR +I AH+ PC V+EGD V+IG+ RPLSKTV F VL V+
Sbjct: 64 KFMRYEKRKKHIHAHLPPCIEVREGDTVVIGETRPLSKTVSFVVLGVV 111
>gi|149460545|ref|XP_001520976.1| PREDICTED: 40S ribosomal protein S11-like, partial [Ornithorhynchus
anatinus]
gi|3088339|dbj|BAA25818.1| ribosomal protein S11 [Homo sapiens]
Length = 83
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 61/78 (78%), Gaps = 4/78 (5%)
Query: 65 KMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRF 123
KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD V +G+CRPLSKTVRF
Sbjct: 6 KMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRF 65
Query: 124 NVLKVIPAGSSGGAKKAF 141
NVLKV A G KK F
Sbjct: 66 NVLKVTKA---AGTKKQF 80
>gi|85812215|gb|ABC84245.1| RPS11 [Bos taurus]
Length = 80
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 4/79 (5%)
Query: 64 AKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVR 122
KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD V +G+CRPLSKTVR
Sbjct: 2 VKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVR 61
Query: 123 FNVLKVIPAGSSGGAKKAF 141
FNVLKV A G KK F
Sbjct: 62 FNVLKVTKA---AGTKKQF 77
>gi|149055981|gb|EDM07412.1| rCG54396, isoform CRA_c [Rattus norvegicus]
Length = 79
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 61/78 (78%), Gaps = 4/78 (5%)
Query: 65 KMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRF 123
KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD V +G+CRPLSKTVRF
Sbjct: 2 KMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRF 61
Query: 124 NVLKVIPAGSSGGAKKAF 141
NVLKV A G KK F
Sbjct: 62 NVLKVTKA---AGTKKQF 76
>gi|20089951|ref|NP_616026.1| 30S ribosomal protein S17 [Methanosarcina acetivorans C2A]
gi|74580589|sp|Q8TRT8.1|RS17_METAC RecName: Full=30S ribosomal protein S17P
gi|19914912|gb|AAM04506.1| ribosomal protein S17p [Methanosarcina acetivorans C2A]
Length = 109
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 65/108 (60%), Gaps = 4/108 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
+ IGL P E + Y CPF GT+ +RG+IL GT S+KM+ T+++ R Y+
Sbjct: 1 MARDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKM 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
V KYQRYEKR S I AH C K GD V I +CRP+SKT + V+K
Sbjct: 57 VSKYQRYEKRRSKIHAHNPACISAKVGDIVTIAECRPISKTKSYVVVK 104
>gi|88603490|ref|YP_503668.1| 30S ribosomal protein S17 [Methanospirillum hungatei JF-1]
gi|94730519|sp|Q2FT32.1|RS17_METHJ RecName: Full=30S ribosomal protein S17P
gi|88188952|gb|ABD41949.1| SSU ribosomal protein S17P [Methanospirillum hungatei JF-1]
Length = 108
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
+ IGL P E D CPF GT+ +RG+++ G S KM +++V+R+YLHF
Sbjct: 1 MARDIGLNVPVP----EKDCSDVNCPFHGTLPVRGQVITGKVVSDKMTGSVVVQRDYLHF 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
V+KYQRYEKR S I AH PC + GD V I +CRPLSKT + V++V
Sbjct: 57 VRKYQRYEKRSSKIHAHNPPCLHARVGDMVSIAECRPLSKTKTYVVVEV 105
>gi|161485670|ref|NP_634157.2| 30S ribosomal protein S17 [Methanosarcina mazei Go1]
gi|452210670|ref|YP_007490784.1| SSU ribosomal protein S11e (S17p) [Methanosarcina mazei Tuc01]
gi|93140687|sp|Q8PV41.2|RS17_METMA RecName: Full=30S ribosomal protein S17P
gi|452100572|gb|AGF97512.1| SSU ribosomal protein S11e (S17p) [Methanosarcina mazei Tuc01]
Length = 109
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 65/108 (60%), Gaps = 4/108 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
+ IGL P E + Y CPF GT+ +RG+IL GT S+KM+ T+++ R Y+
Sbjct: 1 MARDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKM 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
V KYQRYEKR S I AH C K GD V I +CRP+SKT F V+K
Sbjct: 57 VSKYQRYEKRRSKIHAHNPACISAKVGDIVTIVECRPISKTKSFVVVK 104
>gi|73667653|ref|YP_303668.1| 30S ribosomal protein S17 [Methanosarcina barkeri str. Fusaro]
gi|93140686|sp|Q46GA4.1|RS17_METBF RecName: Full=30S ribosomal protein S17P
gi|72394815|gb|AAZ69088.1| SSU ribosomal protein S17P [Methanosarcina barkeri str. Fusaro]
Length = 109
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 66/108 (61%), Gaps = 4/108 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
+ IGL P E +Y CPF GT+S+RG+IL GT S+KM+ T+++ R Y+
Sbjct: 1 MARDIGLNIPAPSEECNDSY----CPFHGTLSVRGQILVGTVVSSKMDNTVVIERQYMKL 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
V KYQRYEKR S + AH PC K GD V I +CR +SKT + V+K
Sbjct: 57 VPKYQRYEKRRSKVHAHNPPCISAKVGDIVTIAECRRISKTKSYVVVK 104
>gi|395849830|ref|XP_003797516.1| PREDICTED: uncharacterized protein LOC100953810 [Otolemur
garnettii]
Length = 339
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 79/129 (61%), Gaps = 17/129 (13%)
Query: 4 QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKCPFTG 48
QTE+A+ KQP G+ G +++++IGLGFK +E IEGTYID+K PF G
Sbjct: 98 QTERAYQKQPTIFQNKKRVLWGETGKEKLAQYYENIGLGFKILKETIEGTYIDRKYPFAG 157
Query: 49 TVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDH 108
V IRG +L G KM RTI++ ++ LH++ KY +EK H N AH+SP + GD
Sbjct: 158 KVPIRGWVLPGVVTKMKMQRTIVICQDSLHYICKYNHFEKHHKNKSAHLSPASGI--GDI 215
Query: 109 VIIGQCRPL 117
V +G+ +PL
Sbjct: 216 VTVGKSQPL 224
>gi|219851116|ref|YP_002465548.1| 30S ribosomal protein S17 [Methanosphaerula palustris E1-9c]
gi|254811369|sp|B8GKE2.1|RS17_METPE RecName: Full=30S ribosomal protein S17P
gi|219545375|gb|ACL15825.1| ribosomal protein S17 [Methanosphaerula palustris E1-9c]
Length = 108
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 72/109 (66%), Gaps = 4/109 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
++IGL + P E + D CPF G +S+RG+++ G S +M TI+V R+YLH+
Sbjct: 1 MARNIGLNVQPPVEECQ----DVNCPFHGNLSVRGQVITGKVVSDRMLGTIVVGRDYLHY 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
V+KY+RYEKR S + AH PC +VK GD V I +CRP+SK+ F V++V
Sbjct: 57 VRKYKRYEKRSSKLHAHNPPCLQVKVGDIVKIAECRPISKSTTFVVVEV 105
>gi|429965623|gb|ELA47620.1| archaeal ribosomal protein S17P [Vavraia culicis 'floridensis']
Length = 155
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 68/118 (57%), Gaps = 6/118 (5%)
Query: 19 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
R++K +G G P AI GTYIDK CPFTG+V + G+ + K RTII + Y
Sbjct: 28 RYFKKVGYGITVPETAINGTYIDKNCPFTGSVRLYGKFVKAEVLKMKQIRTIICIKKYFF 87
Query: 79 FVKKYQRYEKRHSNIPAHISPCFR--VKEGDHVIIGQCRPLSKTVRFNVL----KVIP 130
+VKKY+RYE+R H+ PCF V GD V RPLSKT RF V+ K++P
Sbjct: 88 YVKKYKRYERRQKKFAVHLPPCFEGLVNVGDIVNCALVRPLSKTKRFVVVGVENKIVP 145
>gi|282164900|ref|YP_003357285.1| 30S ribosomal protein S17P [Methanocella paludicola SANAE]
gi|282157214|dbj|BAI62302.1| 30S ribosomal protein S17P [Methanocella paludicola SANAE]
Length = 110
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 67/107 (62%), Gaps = 4/107 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
K IGL P E D CPF G +S+RG++L G S+KM++T++V+R YL
Sbjct: 6 KDIGLNVPAP----ESACTDPNCPFHGHLSVRGQLLDGVVVSSKMDKTVVVQREYLKRNI 61
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
K+ RYEKR S + AH PC KEGD V+I +CRPLSKT F V++V
Sbjct: 62 KFDRYEKRRSKLHAHNPPCINAKEGDKVMIAECRPLSKTKTFVVVEV 108
>gi|355571374|ref|ZP_09042626.1| ribosomal protein S17P [Methanolinea tarda NOBI-1]
gi|354825762|gb|EHF09984.1| ribosomal protein S17P [Methanolinea tarda NOBI-1]
Length = 108
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 69/112 (61%), Gaps = 4/112 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
++IGL + P D CPF GT+ +RG+++ G S +M T++V R YLH+
Sbjct: 1 MARNIGLSVRPPERECN----DAFCPFHGTLPVRGQVITGKVVSDRMTGTVVVERAYLHY 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPA 131
V KY RYEKR+S I AH PC + K GD V I +CRPLSKT + V++V P+
Sbjct: 57 VGKYNRYEKRNSKIHAHNPPCIQAKTGDTVRIAECRPLSKTTTYVVVEVQPS 108
>gi|313245649|emb|CBY40317.1| unnamed protein product [Oikopleura dioica]
Length = 80
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 61/78 (78%), Gaps = 3/78 (3%)
Query: 65 KMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRF 123
KM RTII+RR+YLHFVKKY R+E+RH+N+ H+SPCFR V+ GD V +G+CRPLSKTVRF
Sbjct: 2 KMQRTIIIRRDYLHFVKKYGRFERRHTNMAVHLSPCFRDVEAGDIVTVGECRPLSKTVRF 61
Query: 124 NVLKVIPAGSSGGAKKAF 141
NV+K G AKK F
Sbjct: 62 NVVK--HTKPPGAAKKQF 77
>gi|126178523|ref|YP_001046488.1| 30S ribosomal protein S17 [Methanoculleus marisnigri JR1]
gi|166219710|sp|A3CT06.1|RS17_METMJ RecName: Full=30S ribosomal protein S17P
gi|125861317|gb|ABN56506.1| SSU ribosomal protein S17P [Methanoculleus marisnigri JR1]
Length = 108
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 68/108 (62%), Gaps = 4/108 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
++IGL P E D CPF GT+ +RG+++ G S +MN T++V R +LH+VK
Sbjct: 3 RNIGLDVPIPETECE----DVNCPFHGTLPVRGQVITGKVVSDRMNGTVVVEREFLHYVK 58
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+RYEKR S AH +PC GD V I +CRPLSKT F V++V+
Sbjct: 59 KYKRYEKRRSRYHAHSTPCINAGVGDVVRIAECRPLSKTTNFVVVEVM 106
>gi|440494409|gb|ELQ76790.1| 40S ribosomal protein S11 [Trachipleistophora hominis]
Length = 227
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 73/137 (53%), Gaps = 13/137 (9%)
Query: 7 KAFLKQPGKGGN-------RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAG 59
K + +QP N R+++ +G G P AI GTYIDK CPFTG+V + G+ +
Sbjct: 81 KIYPQQPQIYNNPKNEEKKRYYRQVGYGITVPETAINGTYIDKNCPFTGSVRLYGKFIKA 140
Query: 60 TCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR--VKEGDHVIIGQCRPL 117
K RTII + Y +VKKY+RYE+R H PCF V GD V RPL
Sbjct: 141 EVLKMKQVRTIICIKKYFFYVKKYKRYERRQKKFAVHFPPCFEGLVNVGDIVNCALVRPL 200
Query: 118 SKTVRFNVL----KVIP 130
SKT RF V+ K++P
Sbjct: 201 SKTKRFVVVGVENKIVP 217
>gi|324535665|gb|ADY49432.1| 40S ribosomal protein S11 [Ascaris suum]
Length = 77
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 59/77 (76%), Gaps = 4/77 (5%)
Query: 66 MNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFN 124
M RTI++RR+YLHFVKKY+RYEKRH N+ H SP FR V GD V +G+CRPLSKTVR+N
Sbjct: 1 MQRTIVIRRDYLHFVKKYRRYEKRHKNMSVHCSPAFRDVALGDIVTVGECRPLSKTVRYN 60
Query: 125 VLKVIPAGSSGGAKKAF 141
VLKV+ A G KK F
Sbjct: 61 VLKVLKA---SGTKKGF 74
>gi|154150084|ref|YP_001403702.1| 30S ribosomal protein S17 [Methanoregula boonei 6A8]
gi|166219708|sp|A7I5P8.1|RS17_METB6 RecName: Full=30S ribosomal protein S17P
gi|153998636|gb|ABS55059.1| ribosomal protein S17 [Methanoregula boonei 6A8]
Length = 108
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 71/109 (65%), Gaps = 4/109 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
++IGL + P++ + D CPF GT+ +RG+++ G S KM T++V R+YLH+
Sbjct: 1 MAQNIGLNVQPPKQECK----DVNCPFHGTLPVRGQVITGKVVSDKMMGTVVVARDYLHY 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
V+KY RYEKR S + AH PC + K GD V I +CRPLSK+ + V++V
Sbjct: 57 VRKYNRYEKRISKLHAHNPPCIQAKVGDLVKIAECRPLSKSTTYVVVEV 105
>gi|336477152|ref|YP_004616293.1| 30S ribosomal protein S17 [Methanosalsum zhilinae DSM 4017]
gi|335930533|gb|AEH61074.1| ribosomal protein S17P [Methanosalsum zhilinae DSM 4017]
Length = 109
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 67/108 (62%), Gaps = 4/108 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
++IGL P+E D CPF G++ +RG++L+G S KM +T++++R++
Sbjct: 1 MVRNIGLDVPIPQEECN----DVDCPFHGSLKVRGQVLSGNVVSNKMTKTVVIQRSHETL 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
V KYQRYEKR S I AH PC K GD V I +CRPLSKT F V+K
Sbjct: 57 VDKYQRYEKRQSKIHAHNPPCINAKVGDVVTIAECRPLSKTKSFVVIK 104
>gi|307354332|ref|YP_003895383.1| 30S ribosomal protein S17P [Methanoplanus petrolearius DSM 11571]
gi|307157565|gb|ADN36945.1| ribosomal protein S17P [Methanoplanus petrolearius DSM 11571]
Length = 108
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
K+IGL P + + D CPF G + +RG+++ G S +M +++V R+YLH+
Sbjct: 1 MAKNIGLNVNIPEKECD----DVNCPFHGNLPVRGQVITGKVVSDRMQGSVVVARDYLHY 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
VKKY+RYEKR S + AH PC K GD V I +CRPLSKT F V++V
Sbjct: 57 VKKYKRYEKRSSKLHAHNPPCLGAKVGDTVKIAECRPLSKTKTFVVVEV 105
>gi|395644925|ref|ZP_10432785.1| ribosomal protein S17P [Methanofollis liminatans DSM 4140]
gi|395441665|gb|EJG06422.1| ribosomal protein S17P [Methanofollis liminatans DSM 4140]
Length = 106
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 68/108 (62%), Gaps = 4/108 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
++IGL P + D CPF GT+ + G+++ G S +MN T++V R+YLHFV+
Sbjct: 3 RNIGLNVPLPEKECS----DVNCPFHGTLPVHGQVITGKVVSNRMNGTVVVGRDYLHFVQ 58
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY RYEKR S AH+ C V+ GD V I +CRPLSKT F V++VI
Sbjct: 59 KYNRYEKRSSKYHAHLPGCIDVQIGDTVKIAECRPLSKTTNFVVVEVI 106
>gi|15790641|ref|NP_280465.1| 30S ribosomal protein S17 [Halobacterium sp. NRC-1]
gi|169236380|ref|YP_001689580.1| 30S ribosomal protein S17P [Halobacterium salinarum R1]
gi|3122803|sp|O24786.1|RS17_HALSA RecName: Full=30S ribosomal protein S17P; AltName: Full=HHAS17
gi|226697982|sp|B0R665.1|RS17_HALS3 RecName: Full=30S ribosomal protein S17P
gi|2425185|dbj|BAA22279.1| ribosomal protein S17 [Halobacterium salinarum]
gi|10581168|gb|AAG19945.1| 30S ribosomal protein S17P [Halobacterium sp. NRC-1]
gi|167727446|emb|CAP14234.1| 30S ribosomal protein S17 [Halobacterium salinarum R1]
Length = 109
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
+IGL P EGT D+ CPF G +S+RG++L G S M +T++V R Y FV K
Sbjct: 2 AIGLNVTEP----EGTCSDEDCPFHGNLSVRGQVLEGEVASTDMEKTVVVEREYDVFVPK 57
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS 134
Y RY KR S +PAH CF + GD V I + RPLSKT V+++ G +
Sbjct: 58 YDRYMKRRSRVPAHAPECFDISVGDTVSIAETRPLSKTKSHVVVEITDGGDA 109
>gi|435852129|ref|YP_007313715.1| archaeal ribosomal protein S17P [Methanomethylovorans hollandica
DSM 15978]
gi|433662759|gb|AGB50185.1| archaeal ribosomal protein S17P [Methanomethylovorans hollandica
DSM 15978]
Length = 109
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 68/108 (62%), Gaps = 4/108 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
+ IGL TP+E E T D CPF G + +RG++L GT S KM+RT++++R +
Sbjct: 1 MTRDIGLDVPTPKE--ECT--DINCPFHGKLPVRGQVLVGTVVSNKMDRTVVIQRRHEVL 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
+ KYQRYEKR S I AH PC + GD V + +CRPLSKT + V+K
Sbjct: 57 ISKYQRYEKRQSKIHAHNPPCIDAQVGDIVTVAECRPLSKTKSYVVIK 104
>gi|397780853|ref|YP_006545326.1| 30S ribosomal protein S17P [Methanoculleus bourgensis MS2]
gi|396939355|emb|CCJ36610.1| 30S ribosomal protein S17P [Methanoculleus bourgensis MS2]
Length = 108
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 69/108 (63%), Gaps = 4/108 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
++IGL P E D CPF GT+ +RG+++ G S +MN T++V R ++H+VK
Sbjct: 3 RNIGLNVPIPETECE----DVNCPFHGTLPVRGQVITGKVVSDRMNGTVVVEREFIHYVK 58
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+RYEKR S AH +PC + GD V I +CRPL+KT F V++V+
Sbjct: 59 KYKRYEKRRSRYHAHSTPCINARIGDVVRIAECRPLAKTKNFVVVEVV 106
>gi|374630581|ref|ZP_09702966.1| SSU ribosomal protein S17P [Methanoplanus limicola DSM 2279]
gi|373908694|gb|EHQ36798.1| SSU ribosomal protein S17P [Methanoplanus limicola DSM 2279]
Length = 108
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
K+ GL P + D CPF GT+ +RG+++ G S KM ++++ R+YLH+
Sbjct: 1 MAKNTGLNVAVPEKECN----DVNCPFHGTLPVRGQVITGKVVSDKMQGSVVISRDYLHY 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
VKKY+RYEKR S I AH C VK GD V I +CRP+SKT +F V++V
Sbjct: 57 VKKYKRYEKRSSKIHAHNPSCLGVKVGDTVKIAECRPISKTKKFVVVEV 105
>gi|386001176|ref|YP_005919475.1| 30S ribosomal protein S17 [Methanosaeta harundinacea 6Ac]
gi|357209232|gb|AET63852.1| 30S ribosomal protein S17P [Methanosaeta harundinacea 6Ac]
Length = 109
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 4/110 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
+ +GLG K+P +A + D KCPF G +S+RG++ G S KM T++V R +
Sbjct: 3 IMRDVGLGVKSPEKACD----DPKCPFHGELSVRGQVFDGKVVSDKMTDTVVVLREFERK 58
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
+ KY RYEKR S + AH PC + K GD V + +CRPLSKT F V++V+
Sbjct: 59 MTKYDRYEKRRSKLHAHNPPCLKAKVGDVVKVAECRPLSKTKSFVVVEVV 108
>gi|410670342|ref|YP_006922713.1| 30S ribosomal protein S17P [Methanolobus psychrophilus R15]
gi|409169470|gb|AFV23345.1| 30S ribosomal protein S17P [Methanolobus psychrophilus R15]
Length = 109
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 65/108 (60%), Gaps = 4/108 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
+ IGL +P E D CPF G + +RG++L GT S KM+RT++++R +
Sbjct: 1 MARDIGLDVPSP----EKECNDVNCPFHGQLPVRGQVLVGTVVSNKMDRTVVIQRKHEML 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
+KKYQRYEKR S I AH C K GD V I +CRPLSKT + V+K
Sbjct: 57 IKKYQRYEKRQSKIHAHNPDCIDAKVGDIVTIAECRPLSKTKSYVVIK 104
>gi|315425859|dbj|BAJ47512.1| small subunit ribosomal protein S17 [Candidatus Caldiarchaeum
subterraneum]
gi|343484674|dbj|BAJ50328.1| small subunit ribosomal protein S17 [Candidatus Caldiarchaeum
subterraneum]
Length = 109
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 68/106 (64%), Gaps = 4/106 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
++IG+ P+ + D CPF G +S+RG +L+G + KMN+T++V ++ +VK
Sbjct: 5 RNIGIPVNPPKTSCN----DPDCPFHGKLSVRGILLSGVVYKKKMNKTVVVENEHIVYVK 60
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
KY+RY +R S I AH+ PC GD V +G+CRPLSKTV F VL+
Sbjct: 61 KYKRYMRRRSRISAHLPPCIDADVGDRVRLGECRPLSKTVSFVVLE 106
>gi|448415410|ref|ZP_21578210.1| 30S ribosomal protein S17P [Halosarcina pallida JCM 14848]
gi|445681068|gb|ELZ33509.1| 30S ribosomal protein S17P [Halosarcina pallida JCM 14848]
Length = 108
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
+IGL + P EA D+ CPF G++++RG+ L GT S M++T++V R Y V K
Sbjct: 2 AIGLNVEEPEEACS----DENCPFHGSLAVRGQTLEGTVASTDMDKTVVVEREYDVRVPK 57
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
Y RY KR S IPAH PC + EGD V I + RPLSKT V++ +
Sbjct: 58 YDRYMKRRSRIPAHAPPCMDLAEGDTVRIAETRPLSKTKAHVVVETL 104
>gi|335437503|ref|ZP_08560279.1| 30S ribosomal protein S17P [Halorhabdus tiamatea SARL4B]
gi|335438900|ref|ZP_08561631.1| 30S ribosomal protein S17P [Halorhabdus tiamatea SARL4B]
gi|334890171|gb|EGM28445.1| 30S ribosomal protein S17P [Halorhabdus tiamatea SARL4B]
gi|334895851|gb|EGM34014.1| 30S ribosomal protein S17P [Halorhabdus tiamatea SARL4B]
Length = 108
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 60/98 (61%), Gaps = 4/98 (4%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
++GL + P + T D+ CPF GT+S+RG+ L GT S M +T++V R Y V K
Sbjct: 2 ALGLNVQQP----DATCDDENCPFHGTLSVRGQTLEGTVASTDMQKTVVVEREYDVTVPK 57
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKT 120
Y R KR S IPAH PC V+EGD V I + RPLSKT
Sbjct: 58 YDRLMKRRSRIPAHAPPCMDVEEGDTVTIAETRPLSKT 95
>gi|313125799|ref|YP_004036069.1| 30S ribosomal protein S17 [Halogeometricum borinquense DSM 11551]
gi|448285638|ref|ZP_21476879.1| 30S ribosomal protein S17P [Halogeometricum borinquense DSM 11551]
gi|312292164|gb|ADQ66624.1| SSU ribosomal protein S17P [Halogeometricum borinquense DSM 11551]
gi|445576274|gb|ELY30731.1| 30S ribosomal protein S17P [Halogeometricum borinquense DSM 11551]
Length = 108
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
+IGL + P EA D+ CPF G++++RG+ + GT S M++T++V R Y V K
Sbjct: 2 AIGLNVEEPEEACS----DENCPFHGSLAVRGQTIEGTVASTDMDKTVVVEREYDVRVPK 57
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
Y RY KR S IPAH PC ++EGD V I + RPLSKT V++ +
Sbjct: 58 YDRYMKRRSRIPAHAPPCMDLEEGDTVRIAETRPLSKTKAHVVVETL 104
>gi|432332002|ref|YP_007250145.1| archaeal ribosomal protein S17P [Methanoregula formicicum SMSP]
gi|432138711|gb|AGB03638.1| archaeal ribosomal protein S17P [Methanoregula formicicum SMSP]
Length = 108
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 68/106 (64%), Gaps = 4/106 (3%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
+IGL + P+ + D CPF GT+ +RG+++ G S +M T++V RNY+H+V+K
Sbjct: 4 NIGLDVQAPKAECK----DVNCPFHGTLPVRGQVITGKVVSDRMMGTVVVARNYMHYVRK 59
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
Y+RYEKR S + AH C K GD V I +CRPLSK+ F V++V
Sbjct: 60 YKRYEKRSSKLHAHNPACIGAKVGDMVKIAECRPLSKSTTFVVVEV 105
>gi|326566952|gb|ADZ95656.1| 40S ribosomal protein S11 [Nosema bombycis]
Length = 122
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 68/115 (59%), Gaps = 2/115 (1%)
Query: 27 GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRY 86
G P+ AI +IDKKCPFTG V + G+I G K +TI+VR + L + KKY+R+
Sbjct: 4 GINVPQTAITSNFIDKKCPFTGDVRVTGKIFQGRVLKMKAEKTIVVRIDRLLYNKKYRRF 63
Query: 87 EKRHSNIPAHISPCFR--VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKK 139
+RH+N+ H+SPCF V GD VI G+ R LSKT VL + + G K+
Sbjct: 64 GRRHTNLSVHMSPCFEGLVHVGDTVICGETRKLSKTKSSVVLDFVKKSTDGMFKR 118
>gi|325958541|ref|YP_004290007.1| 30S ribosomal protein S17 [Methanobacterium sp. AL-21]
gi|325329973|gb|ADZ09035.1| ribosomal protein S17P [Methanobacterium sp. AL-21]
Length = 106
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 64/105 (60%), Gaps = 4/105 (3%)
Query: 24 IGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKY 83
+G+ K P+ + D CPF GT+ +RG+IL G S K RTI V R++ F+ KY
Sbjct: 2 VGIDVKEPKNKCD----DPNCPFHGTLPVRGQILEGIVTSEKAERTITVERSFYKFITKY 57
Query: 84 QRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
+RYEKR S I AH C VK GD V I +CRPLSKT F +++V
Sbjct: 58 ERYEKRKSKIKAHKPDCLDVKIGDSVKIAECRPLSKTKHFVLVEV 102
>gi|91772092|ref|YP_564784.1| 30S ribosomal protein S17P [Methanococcoides burtonii DSM 6242]
gi|118573054|sp|Q12ZU2.1|RS17_METBU RecName: Full=30S ribosomal protein S17P
gi|91711107|gb|ABE51034.1| SSU ribosomal protein S17P [Methanococcoides burtonii DSM 6242]
Length = 109
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
K IGL P + + D CPF G + +RG+I GT SAKM+RT+++++
Sbjct: 1 MAKDIGLDIPEPTKECD----DINCPFHGELPVRGQIHVGTVVSAKMDRTVVIQQRREKL 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
+ KYQRYEKR S I AH PC K GD V I +CRPLSKT + V+K
Sbjct: 57 INKYQRYEKRQSKIHAHNPPCIDAKVGDIVTIAECRPLSKTKSYVVVK 104
>gi|257053368|ref|YP_003131201.1| 30S ribosomal protein S17P [Halorhabdus utahensis DSM 12940]
gi|256692131|gb|ACV12468.1| ribosomal protein S17 [Halorhabdus utahensis DSM 12940]
Length = 108
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 60/98 (61%), Gaps = 4/98 (4%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
++GL + P + T D+ CPF GT+S+RG+ L GT S M +T++V R Y V K
Sbjct: 2 ALGLNVQQP----DVTCDDENCPFHGTLSVRGQTLEGTVASTDMQKTVVVEREYDVTVPK 57
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKT 120
Y R KR S IPAH PC V+EGD V I + RPLSKT
Sbjct: 58 YDRLMKRRSRIPAHAPPCMDVEEGDTVTIAETRPLSKT 95
>gi|156938194|ref|YP_001435990.1| 30S ribosomal protein S17 [Ignicoccus hospitalis KIN4/I]
gi|156567178|gb|ABU82583.1| SSU ribosomal protein S17P [Ignicoccus hospitalis KIN4/I]
Length = 122
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
Query: 37 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 96
GT D +CP+ G + +RG IL G KMN+ ++VR YL++ +KYQRYE+R SNI A
Sbjct: 23 GTCNDPECPWHGHLKVRGTILEGVVVKKKMNKAVVVRHEYLYYNRKYQRYERRKSNIHAR 82
Query: 97 ISPCF--RVKEGDHVIIGQCRPLSKTVRFNVL 126
+ PC +KEGD V+IG+ RPL+K++ F VL
Sbjct: 83 LPPCLADEIKEGDVVVIGETRPLAKSISFVVL 114
>gi|116755007|ref|YP_844125.1| 30S ribosomal protein S17 [Methanosaeta thermophila PT]
gi|116666458|gb|ABK15485.1| SSU ribosomal protein S17P [Methanosaeta thermophila PT]
Length = 106
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 66/109 (60%), Gaps = 4/109 (3%)
Query: 21 WKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
+ IGL P++A D KCPF G + +RG++L G S KM RT++V R + +
Sbjct: 1 MRDIGLDVSAPQQACN----DPKCPFHGRLPVRGQVLEGIVVSDKMARTVVVMREFKKRI 56
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+RYEKR S I AH PC K G+ V I +CRPLSKT F V++V+
Sbjct: 57 TKYERYEKRRSKIHAHNPPCLDAKVGERVRIAECRPLSKTKSFVVVEVM 105
>gi|408404345|ref|YP_006862328.1| 30S ribosomal protein S17p [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|300521602|gb|ADK26012.1| r-protein S17p [Candidatus Nitrososphaera gargensis]
gi|408364941|gb|AFU58671.1| 30S ribosomal protein S17p [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 113
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 70/109 (64%), Gaps = 4/109 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
++IG+ +PR+ E D+ CPF GT+S+RG++L G SAK + ++V R Y
Sbjct: 1 MVRNIGVSVISPRKTCE----DELCPFHGTLSVRGKLLTGIVSSAKAPKMVVVSREYPRP 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
K++R+++ S + A++ PC VKEGD V I +CRPLSKTV F V++V
Sbjct: 57 TPKFKRFQRSRSKVHAYLPPCVDVKEGDEVRIAECRPLSKTVSFVVIEV 105
>gi|227830396|ref|YP_002832176.1| 30S ribosomal protein S17 [Sulfolobus islandicus L.S.2.15]
gi|229579215|ref|YP_002837613.1| 30S ribosomal protein S17 [Sulfolobus islandicus Y.G.57.14]
gi|229582033|ref|YP_002840432.1| 30S ribosomal protein S17 [Sulfolobus islandicus Y.N.15.51]
gi|284997903|ref|YP_003419670.1| 30S ribosomal protein S17 [Sulfolobus islandicus L.D.8.5]
gi|227456844|gb|ACP35531.1| ribosomal protein S17 [Sulfolobus islandicus L.S.2.15]
gi|228009929|gb|ACP45691.1| ribosomal protein S17 [Sulfolobus islandicus Y.G.57.14]
gi|228012749|gb|ACP48510.1| ribosomal protein S17 [Sulfolobus islandicus Y.N.15.51]
gi|284445798|gb|ADB87300.1| ribosomal protein S17 [Sulfolobus islandicus L.D.8.5]
Length = 114
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 63/96 (65%), Gaps = 4/96 (4%)
Query: 31 PREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRH 90
P +A E D+ CP+ G++ +RG IL G K + ++ R YL++ KY+RYE+R
Sbjct: 19 PEKACE----DEDCPYHGSLRVRGIILEGVIVKYKGTKAAVIERQYLYYDSKYKRYERRR 74
Query: 91 SNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVL 126
S I AH+ PC V+EGD VIIG+CRPLSK++ F VL
Sbjct: 75 SRIHAHVPPCVNVREGDKVIIGECRPLSKSISFVVL 110
>gi|148642812|ref|YP_001273325.1| 30S ribosomal protein S17P [Methanobrevibacter smithii ATCC 35061]
gi|222445043|ref|ZP_03607558.1| hypothetical protein METSMIALI_00660 [Methanobrevibacter smithii
DSM 2375]
gi|261350388|ref|ZP_05975805.1| 30S ribosomal protein S17P [Methanobrevibacter smithii DSM 2374]
gi|148551829|gb|ABQ86957.1| ribosomal protein S17p [Methanobrevibacter smithii ATCC 35061]
gi|222434608|gb|EEE41773.1| archaeal ribosomal protein S17P [Methanobrevibacter smithii DSM
2375]
gi|288861171|gb|EFC93469.1| 30S ribosomal protein S17P [Methanobrevibacter smithii DSM 2374]
Length = 105
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 24 IGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKY 83
+GL + P E T D CPF GT+ +RG++L G S K RTI V R+Y F+KKY
Sbjct: 2 VGLNVQEP----ETTCDDPNCPFHGTLPLRGQVLEGIVVSNKAERTISVERSYYKFIKKY 57
Query: 84 QRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
+RYEKR S I H C V GD V + +CRPLSKT F +++V
Sbjct: 58 ERYEKRKSKINVHKPDCLSVNVGDSVKVAECRPLSKTKHFVLVEV 102
>gi|410721708|ref|ZP_11361038.1| archaeal ribosomal protein S17P [Methanobacterium sp. Maddingley
MBC34]
gi|410598454|gb|EKQ53027.1| archaeal ribosomal protein S17P [Methanobacterium sp. Maddingley
MBC34]
Length = 107
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 64/105 (60%), Gaps = 4/105 (3%)
Query: 24 IGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKY 83
+G+ P+E D CPF GT+ +RG+IL G S K RTI V R++ F++KY
Sbjct: 2 VGIEVTEPKEKCN----DPNCPFHGTLPVRGQILEGIVTSDKAERTITVERSFYKFIRKY 57
Query: 84 QRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
+RYEKR S I AH C +V GD V I +CRPLSKT F V++V
Sbjct: 58 ERYEKRKSKINAHKPDCIQVNIGDAVKIAECRPLSKTKHFVVVEV 102
>gi|333987669|ref|YP_004520276.1| 30S ribosomal protein S17P [Methanobacterium sp. SWAN-1]
gi|333825813|gb|AEG18475.1| ribosomal protein S17P [Methanobacterium sp. SWAN-1]
Length = 106
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 64/105 (60%), Gaps = 4/105 (3%)
Query: 24 IGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKY 83
+G+ K P+ + D CPF GT+ +RG+IL G S K RTI V R++ F++KY
Sbjct: 2 VGIDVKEPKTKCD----DPNCPFHGTLPVRGQILEGIVTSEKAERTITVERSFYKFIRKY 57
Query: 84 QRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
+RYEKR S I AH C VK GD V I +CR LSKT F V++V
Sbjct: 58 ERYEKRKSKITAHKPDCIDVKVGDAVKIAECRRLSKTKNFVVVEV 102
>gi|432328998|ref|YP_007247142.1| archaeal ribosomal protein S17P [Aciduliprofundum sp. MAR08-339]
gi|432135707|gb|AGB04976.1| archaeal ribosomal protein S17P [Aciduliprofundum sp. MAR08-339]
Length = 108
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IG+ K P + + CP+ G + +RG+I+ G S KMN T++V R YL +V
Sbjct: 3 RDIGVDAKPPEKECNDPF----CPWHGHLKVRGQIVEGVVISDKMNNTVVVEREYLRYVP 58
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+RYEKR S H PC K GDHV +CRPLSKTV F +++ I
Sbjct: 59 KYERYEKRRSRYHVHNPPCIDAKVGDHVRFMECRPLSKTVSFVIIEKI 106
>gi|55378376|ref|YP_136226.1| 30S ribosomal protein S17 [Haloarcula marismortui ATCC 43049]
gi|448636978|ref|ZP_21675426.1| 30S ribosomal protein S17P [Haloarcula sinaiiensis ATCC 33800]
gi|448648012|ref|ZP_21679490.1| 30S ribosomal protein S17P [Haloarcula californiae ATCC 33799]
gi|448681472|ref|ZP_21691563.1| 30S ribosomal protein S17P [Haloarcula argentinensis DSM 12282]
gi|448685269|ref|ZP_21693261.1| 30S ribosomal protein S17P [Haloarcula japonica DSM 6131]
gi|133824|sp|P12741.3|RS17_HALMA RecName: Full=30S ribosomal protein S17P; AltName: Full=HS14;
AltName: Full=HmaS17
gi|43613|emb|CAA39017.1| ribosomal protein HmaS17 [Haloarcula marismortui]
gi|55231101|gb|AAV46520.1| ribosomal protein S17p [Haloarcula marismortui ATCC 43049]
gi|445765284|gb|EMA16423.1| 30S ribosomal protein S17P [Haloarcula sinaiiensis ATCC 33800]
gi|445767342|gb|EMA18445.1| 30S ribosomal protein S17P [Haloarcula argentinensis DSM 12282]
gi|445775882|gb|EMA26877.1| 30S ribosomal protein S17P [Haloarcula californiae ATCC 33799]
gi|445781880|gb|EMA32731.1| 30S ribosomal protein S17P [Haloarcula japonica DSM 6131]
Length = 112
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 63/115 (54%), Gaps = 4/115 (3%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
++GL + P E T D+ CPF G +S+RG+ L G S M +T++V R Y V K
Sbjct: 2 ALGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPK 57
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGA 137
Y R+ KR S +PAH C + GD V I +CRPLSKT V+ V+ G A
Sbjct: 58 YDRFMKRRSRVPAHAPDCLDLAVGDTVTIAECRPLSKTKSHVVVGVVADEQDGDA 112
>gi|110668732|ref|YP_658543.1| 30S ribosomal protein S17P [Haloquadratum walsbyi DSM 16790]
gi|385804232|ref|YP_005840632.1| 30S ribosomal protein S17 [Haloquadratum walsbyi C23]
gi|118573047|sp|Q18GF8.1|RS17_HALWD RecName: Full=30S ribosomal protein S17P
gi|109626479|emb|CAJ52940.1| 30S ribosomal protein S17 [Haloquadratum walsbyi DSM 16790]
gi|339729724|emb|CCC41002.1| 30S ribosomal protein S17 [Haloquadratum walsbyi C23]
Length = 110
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 67/116 (57%), Gaps = 7/116 (6%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
+IGL P E + D CPF G++S+RG+ L GT S M++T+IV R Y V K
Sbjct: 2 AIGLNVTEP----EVSCADTNCPFHGSLSVRGQTLEGTVASTDMDKTVIVEREYDVRVPK 57
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAK 138
Y R KR S IPAH PC + EGD V I + RPLSKT V++ I +GGA+
Sbjct: 58 YDRLMKRRSRIPAHAPPCVDLAEGDTVRIAETRPLSKTKSHVVVEQI---DTGGAE 110
>gi|227827700|ref|YP_002829480.1| 30S ribosomal protein S17 [Sulfolobus islandicus M.14.25]
gi|229584904|ref|YP_002843406.1| 30S ribosomal protein S17 [Sulfolobus islandicus M.16.27]
gi|238619871|ref|YP_002914697.1| 30S ribosomal protein S17 [Sulfolobus islandicus M.16.4]
gi|385773372|ref|YP_005645938.1| 30S ribosomal protein S17 [Sulfolobus islandicus HVE10/4]
gi|385776010|ref|YP_005648578.1| 30S ribosomal protein S17 [Sulfolobus islandicus REY15A]
gi|227459496|gb|ACP38182.1| ribosomal protein S17 [Sulfolobus islandicus M.14.25]
gi|228019954|gb|ACP55361.1| ribosomal protein S17 [Sulfolobus islandicus M.16.27]
gi|238380941|gb|ACR42029.1| ribosomal protein S17 [Sulfolobus islandicus M.16.4]
gi|323474758|gb|ADX85364.1| ribosomal protein S17 [Sulfolobus islandicus REY15A]
gi|323477486|gb|ADX82724.1| ribosomal protein S17 [Sulfolobus islandicus HVE10/4]
Length = 114
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 62/96 (64%), Gaps = 4/96 (4%)
Query: 31 PREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRH 90
P +A E D+ CP+ G++ +RG L G K + ++ R YL++ KY+RYE+R
Sbjct: 19 PEKACE----DEDCPYHGSLRVRGITLEGVIVKYKGTKAAVIERQYLYYDSKYKRYERRR 74
Query: 91 SNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVL 126
S I AH+ PC V+EGD VIIG+CRPLSK++ F VL
Sbjct: 75 SRIHAHVPPCVNVREGDKVIIGECRPLSKSISFVVL 110
>gi|374724274|gb|EHR76354.1| Ribosomal protein S17 [uncultured marine group II euryarchaeote]
Length = 111
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 68/107 (63%), Gaps = 4/107 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IG+ K P + +G D CPF G++ +RG++L GT S M +TI + RN + +++
Sbjct: 2 RDIGVDVKNPTDEWDG---DANCPFYGSLRLRGQVLEGTVSSLGMQKTITIERNNVRYME 58
Query: 82 KYQRYEKRHSNIPAHISPCF-RVKEGDHVIIGQCRPLSKTVRFNVLK 127
KY+R+EKR S + AH+ C V GD V + +CRPLSKTV F V++
Sbjct: 59 KYERFEKRTSVLSAHLPACIGEVAVGDTVKVMECRPLSKTVSFCVIE 105
>gi|408381912|ref|ZP_11179459.1| 30S ribosomal protein S17P [Methanobacterium formicicum DSM 3637]
gi|407815360|gb|EKF85945.1| 30S ribosomal protein S17P [Methanobacterium formicicum DSM 3637]
Length = 107
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 24 IGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKY 83
+G+ P+E D CPF G + +RG+IL G S K RTI V R++ F++KY
Sbjct: 2 VGIEVTEPKEKCN----DPNCPFHGNLPVRGQILEGVVTSDKAERTITVERSFYKFIRKY 57
Query: 84 QRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
+RYEKR S I AH C +V GD V I +CRPLSKT F V++V
Sbjct: 58 ERYEKRKSKINAHKPDCIQVNIGDAVKIAECRPLSKTKHFVVVEV 102
>gi|315229866|ref|YP_004070302.1| 30S ribosomal protein S11e (S17p) [Thermococcus barophilus MP]
gi|315182894|gb|ADT83079.1| SSU ribosomal protein S11e (S17p) [Thermococcus barophilus MP]
Length = 111
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IGL + P E + D KCP+ G + I GR+ G S K RT+ V R Y H+++
Sbjct: 2 RDIGLRIQPPAEKCD----DPKCPWHGHLKIHGRVFEGIVVSDKPRRTVTVERQYYHYLR 57
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+RYE R S I AH PC K GD V+I + RPLSKT F V+ V+
Sbjct: 58 KYERYELRRSKIHAHNPPCINAKAGDRVLIAETRPLSKTKHFVVVAVL 105
>gi|15678043|ref|NP_275157.1| 30S ribosomal protein S17 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|304314263|ref|YP_003849410.1| 30S ribosomal protein S17P [Methanothermobacter marburgensis str.
Marburg]
gi|3122805|sp|O26120.1|RS17_METTH RecName: Full=30S ribosomal protein S17P
gi|2621040|gb|AAB84513.1| ribosomal protein S11 (E.coli ) [Methanothermobacter
thermautotrophicus str. Delta H]
gi|302587722|gb|ADL58097.1| 30S ribosomal protein S17P [Methanothermobacter marburgensis str.
Marburg]
Length = 106
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 58/88 (65%)
Query: 41 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 100
D CPF G + +RG+IL GT S K RT+ V R++ F++KY+RYEKR S I AH C
Sbjct: 15 DPNCPFHGDLPLRGQILEGTVVSDKAERTVTVERSFYKFIRKYERYEKRKSKIKAHKPDC 74
Query: 101 FRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
V+ GD V I +CRPLSKT F V++V
Sbjct: 75 IDVRVGDTVKIAECRPLSKTKNFVVVEV 102
>gi|342906228|gb|AEL79397.1| 40S ribosomal protein S11 [Rhodnius prolixus]
Length = 73
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 55/70 (78%), Gaps = 4/70 (5%)
Query: 73 RRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPA 131
RR+YLH+V+KY R+EKRH N+ H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV
Sbjct: 4 RRDYLHYVRKYNRFEKRHKNMSVHLSPCFRDVEIGDVVTVGECRPLSKTVRFNVLKVTKG 63
Query: 132 GSSGGAKKAF 141
GAKKAF
Sbjct: 64 ---TGAKKAF 70
>gi|126465925|ref|YP_001041034.1| 30S ribosomal protein S17 [Staphylothermus marinus F1]
gi|126014748|gb|ABN70126.1| SSU ribosomal protein S17P [Staphylothermus marinus F1]
Length = 117
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 22 KSIGL-GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
++IG+ G + P+E+ D KCP+ G V +RG+IL G AKM+RT++VR +Y ++V
Sbjct: 7 RNIGIPGIEPPKESCN----DPKCPWHGHVKVRGQILRGVVVKAKMHRTVVVRHDYYYYV 62
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
+KY+RYEKRH++I AH PC KEGD V+IG+ RPLSKTV F VL +I
Sbjct: 63 RKYRRYEKRHTHIHAHNPPCINAKEGDEVLIGETRPLSKTVHFVVLGII 111
>gi|330508489|ref|YP_004384917.1| 30S ribosomal protein S17 [Methanosaeta concilii GP6]
gi|328929297|gb|AEB69099.1| ribosomal protein S17 [Methanosaeta concilii GP6]
Length = 109
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Query: 21 WKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
+ IGL P E D KCPF GT+ +RG++ + T S KM+ T++V R +
Sbjct: 4 MRDIGLDVAPP----EKECNDPKCPFHGTLPVRGQVFSCTVVSDKMDNTVVVMRKFEKKA 59
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+R+EKR S I AH PC K GD V I +CRPLSKT + V++V+
Sbjct: 60 TKYERFEKRQSKIHAHNPPCLEAKAGDRVKIAECRPLSKTKSYVVVEVL 108
>gi|297527398|ref|YP_003669422.1| 30S ribosomal protein S17P [Staphylothermus hellenicus DSM 12710]
gi|297256314|gb|ADI32523.1| ribosomal protein S17P [Staphylothermus hellenicus DSM 12710]
Length = 115
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 22 KSIGL-GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
++IG+ G + P+E+ D KCP+ G V +RG+IL G AKM+RT++VR +Y ++V
Sbjct: 5 RNIGIPGIEPPKESCN----DPKCPWHGHVKVRGQILRGVVVKAKMHRTVVVRHDYYYYV 60
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KKY+RYEKRH++I AH PC KEGD V+IG+ RPLSKTV F VL +I
Sbjct: 61 KKYRRYEKRHTHIHAHNPPCINAKEGDEVLIGETRPLSKTVHFVVLGII 109
>gi|305662600|ref|YP_003858888.1| 30S ribosomal protein S17 [Ignisphaera aggregans DSM 17230]
gi|304377169|gb|ADM27008.1| SSU ribosomal protein S17P [Ignisphaera aggregans DSM 17230]
Length = 119
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 68/111 (61%), Gaps = 7/111 (6%)
Query: 22 KSIGL---GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
K+IG+ G P+ + D KCP+ G V +RG IL G A+M T++V R Y
Sbjct: 5 KNIGIKYPGLTPPQRSCN----DAKCPWHGNVRVRGLILTGKVIKARMRNTVVVEREYTV 60
Query: 79 FVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
++ K++RYE+R S I AH PC KEGD V+IG+ RPL+K+V F VL V+
Sbjct: 61 WISKFKRYERRRSRIHAHNPPCIGAKEGDIVLIGETRPLAKSVSFVVLGVL 111
>gi|344212404|ref|YP_004796724.1| 30S ribosomal protein S17P [Haloarcula hispanica ATCC 33960]
gi|448671524|ref|ZP_21687429.1| 30S ribosomal protein S17P [Haloarcula amylolytica JCM 13557]
gi|343783759|gb|AEM57736.1| 30S ribosomal protein S17P [Haloarcula hispanica ATCC 33960]
gi|445764986|gb|EMA16126.1| 30S ribosomal protein S17P [Haloarcula amylolytica JCM 13557]
Length = 117
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 66/117 (56%), Gaps = 7/117 (5%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
++GL + P E T D+ CPF G +S+RG+ L G S M +T++V R Y V K
Sbjct: 2 ALGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPK 57
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKK 139
Y R+ KR S +PAH C + GD V I +CRPLSKT + +V V+ AGS A
Sbjct: 58 YDRFMKRRSRVPAHAPDCLDLAVGDTVTIAECRPLSKT-KSHV--VVSAGSDEAAND 111
>gi|345005646|ref|YP_004808499.1| 30S ribosomal protein S17 [halophilic archaeon DL31]
gi|344321272|gb|AEN06126.1| ribosomal protein S17P [halophilic archaeon DL31]
Length = 109
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 57/98 (58%), Gaps = 4/98 (4%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
+IGL P EA D CPF GT+S+RG+ L G S M++T++V R Y V K
Sbjct: 2 AIGLNVAEPEEACS----DADCPFHGTLSVRGQTLEGEVASTDMDKTVVVEREYDVRVPK 57
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKT 120
Y RY KR S +PAH PC V GD V I + RPLSKT
Sbjct: 58 YDRYMKRRSRVPAHHPPCMDVAVGDTVRIAETRPLSKT 95
>gi|15897615|ref|NP_342220.1| 30S ribosomal protein S17 [Sulfolobus solfataricus P2]
gi|284174939|ref|ZP_06388908.1| 30S ribosomal protein S17P [Sulfolobus solfataricus 98/2]
gi|384434228|ref|YP_005643586.1| 30S ribosomal protein S17 [Sulfolobus solfataricus 98/2]
gi|11134771|sp|Q9UX98.1|RS17_SULSO RecName: Full=30S ribosomal protein S17P
gi|6015767|emb|CAB57594.1| ribosomal protein S17 (HMAS17) [Sulfolobus solfataricus P2]
gi|13813878|gb|AAK41010.1| SSU ribosomal protein S17AB (rps17AB) [Sulfolobus solfataricus P2]
gi|261602382|gb|ACX91985.1| ribosomal protein S17P [Sulfolobus solfataricus 98/2]
Length = 114
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%)
Query: 41 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 100
D+ CP+ G++ +RG L G + + ++ R YL++ KY+RYE+R S I AH+ PC
Sbjct: 25 DEDCPYHGSLRVRGITLEGVIVKYRGTKAAVIERQYLYYDSKYKRYERRRSRIHAHVPPC 84
Query: 101 FRVKEGDHVIIGQCRPLSKTVRFNVL 126
V+EGD VIIG+CRPLSK++ F VL
Sbjct: 85 INVREGDKVIIGECRPLSKSISFVVL 110
>gi|448630841|ref|ZP_21673296.1| 30S ribosomal protein S17P [Haloarcula vallismortis ATCC 29715]
gi|445755215|gb|EMA06605.1| 30S ribosomal protein S17P [Haloarcula vallismortis ATCC 29715]
Length = 117
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 66/117 (56%), Gaps = 7/117 (5%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
++GL + P E T D+ CPF G +S+RG+ L G S M +T++V R Y V K
Sbjct: 2 ALGLNVQEP----EDTCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPK 57
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKK 139
Y R+ KR S +PAH C + GD V I +CRPLSKT + +V V+ AGS A
Sbjct: 58 YDRFMKRRSRVPAHAPDCLDLAVGDTVTIAECRPLSKT-KSHV--VVSAGSDEAAND 111
>gi|288560118|ref|YP_003423604.1| 30S ribosomal protein S17 [Methanobrevibacter ruminantium M1]
gi|288542828|gb|ADC46712.1| ribosomal protein S17P Rps17p [Methanobrevibacter ruminantium M1]
Length = 106
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 24 IGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKY 83
+GL K P + D CPF G +S+RG++L G + K RTI V R++ F++KY
Sbjct: 2 VGLNVKEPETKCD----DPNCPFHGNLSVRGQVLEGVVTTNKAERTITVERSFYKFIRKY 57
Query: 84 QRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
+RYEKR S I H C V+ GD V I +CRPLSKT F +++V
Sbjct: 58 ERYEKRKSRINVHKPDCIDVEVGDAVKIAECRPLSKTKHFVLVEV 102
>gi|5457764|emb|CAB49254.1| rps17P SSU ribosomal protein S17P [Pyrococcus abyssi GE5]
Length = 116
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IGL + P E + D KCP+ G + I GR+ G S K +T+ V R Y H++K
Sbjct: 6 RDIGLRIQPPAEKCD----DPKCPWHGHLKIHGRVFEGIVVSDKPRKTVTVERQYYHYLK 61
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+RYE R S I AH PC K GD V+I + RPLSKT F V+ V+
Sbjct: 62 KYERYELRRSRIHAHNPPCINAKVGDRVLIAETRPLSKTKHFVVVAVL 109
>gi|6647771|sp|O59426.1|RS17_PYRHO RecName: Full=30S ribosomal protein S17P
gi|3258202|dbj|BAA30885.1| 116aa long hypothetical 30S ribosomal protein S17 [Pyrococcus
horikoshii OT3]
Length = 116
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IGL + P E + D KCP+ G + I GR+ G S K +T+ V R Y H++K
Sbjct: 6 RDIGLRIQPPAEKCD----DPKCPWHGHLKIHGRVFEGIVISDKPRKTVTVERQYYHYLK 61
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+RYE R S I AH PC K GD V+I + RPLSKT F V+ V+
Sbjct: 62 KYERYELRRSRIHAHNPPCINAKVGDRVLIAETRPLSKTKHFVVVAVL 109
>gi|161723321|ref|NP_126023.2| 30S ribosomal protein S17P [Pyrococcus abyssi GE5]
gi|387912864|sp|Q9V1U5.2|RS17_PYRAB RecName: Full=30S ribosomal protein S17P
gi|380741075|tpe|CCE69709.1| TPA: 30S ribosomal protein S17P [Pyrococcus abyssi GE5]
Length = 113
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IGL + P E + D KCP+ G + I GR+ G S K +T+ V R Y H++K
Sbjct: 3 RDIGLRIQPPAEKCD----DPKCPWHGHLKIHGRVFEGIVVSDKPRKTVTVERQYYHYLK 58
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+RYE R S I AH PC K GD V+I + RPLSKT F V+ V+
Sbjct: 59 KYERYELRRSRIHAHNPPCINAKVGDRVLIAETRPLSKTKHFVVVAVL 106
>gi|389853108|ref|YP_006355342.1| 30S ribosomal protein S17 [Pyrococcus sp. ST04]
gi|388250414|gb|AFK23267.1| rpsQ, small subunit ribosomal protein S17 [Pyrococcus sp. ST04]
Length = 113
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IGL + P E + D KCP+ G + I GR+ G S K +T+ V R Y H++K
Sbjct: 3 RDIGLRVQPPAEKCD----DPKCPWHGHLKIHGRVFEGIVVSDKPRKTVTVERQYYHYLK 58
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+RYE R S I AH PC K GD V+I + RPLSKT F V+ V+
Sbjct: 59 KYERYELRRSRIHAHNPPCINAKVGDRVLIAETRPLSKTKHFVVVAVL 106
>gi|84489698|ref|YP_447930.1| 30S ribosomal protein S17P [Methanosphaera stadtmanae DSM 3091]
gi|94730520|sp|Q2NFW6.1|RS17_METST RecName: Full=30S ribosomal protein S17P
gi|84373017|gb|ABC57287.1| 30S ribosomal protein S17P [Methanosphaera stadtmanae DSM 3091]
Length = 106
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 24 IGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKY 83
+G+ K P + D CPF G +S+RG+++ GT S K +RTI V R++ ++ K+
Sbjct: 2 VGINVKQPEKECH----DPNCPFHGELSVRGQVIEGTVTSDKADRTITVERSFYKYINKF 57
Query: 84 QRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
+RYEKR+S I AH C VK GD V I +CR LSKT F +++V
Sbjct: 58 ERYEKRNSKIKAHKPDCLDVKVGDSVKIAECRQLSKTKHFVLVEV 102
>gi|161350001|ref|NP_143606.2| 30S ribosomal protein S17 [Pyrococcus horikoshii OT3]
Length = 113
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IGL + P E + D KCP+ G + I GR+ G S K +T+ V R Y H++K
Sbjct: 3 RDIGLRIQPPAEKCD----DPKCPWHGHLKIHGRVFEGIVISDKPRKTVTVERQYYHYLK 58
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+RYE R S I AH PC K GD V+I + RPLSKT F V+ V+
Sbjct: 59 KYERYELRRSRIHAHNPPCINAKVGDRVLIAETRPLSKTKHFVVVAVL 106
>gi|332158014|ref|YP_004423293.1| 30S ribosomal protein S17P [Pyrococcus sp. NA2]
gi|331033477|gb|AEC51289.1| 30S ribosomal protein S17P [Pyrococcus sp. NA2]
Length = 113
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IGL + P E + D KCP+ G + I GR+ G S K +T+ V R Y H++K
Sbjct: 3 RDIGLRVQPPAEKCD----DPKCPWHGHLKIHGRVFEGIVISDKPRKTVTVERQYYHYLK 58
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+RYE R S I AH PC K GD V+I + RPLSKT F V+ V+
Sbjct: 59 KYERYELRRSRIHAHNPPCINAKVGDRVLIAETRPLSKTKHFVVVAVL 106
>gi|302348029|ref|YP_003815667.1| 30S ribosomal protein S17P [Acidilobus saccharovorans 345-15]
gi|302328441|gb|ADL18636.1| 30S ribosomal protein S17P [Acidilobus saccharovorans 345-15]
Length = 114
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 58/86 (67%)
Query: 41 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 100
D CP+ G++ +RG +L GT K T++VR +YL++ K++RYE R + AH+ PC
Sbjct: 24 DPNCPWHGSLRVRGVLLEGTVEKLKTKTTVVVRHDYLYYDSKFKRYEWRRTKKHAHVPPC 83
Query: 101 FRVKEGDHVIIGQCRPLSKTVRFNVL 126
VK GD V+IG+ RPLSKTV+F VL
Sbjct: 84 VDVKPGDKVLIGETRPLSKTVKFVVL 109
>gi|145524361|ref|XP_001448008.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415541|emb|CAK80611.1| unnamed protein product [Paramecium tetraurelia]
Length = 149
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 79/160 (49%), Gaps = 31/160 (19%)
Query: 1 MAE-QTEKAFLKQPG-------------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MA+ QT++AF KQ G G R+WK +GLGFK P+EAIEG YIDKK
Sbjct: 1 MADLQTQRAFQKQEGIFQNSKKLLAKKTSKGVRYWKEVGLGFKVPKEAIEGHYIDKKSNL 60
Query: 47 TGTVSI----RGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR 102
+ + ++ + I +RR+ F + R P
Sbjct: 61 KRYSHLNQNDQNNYYQKRLFTSMLPNIIDMRRDIEMFQCTFHR----------AFGP--- 107
Query: 103 VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
VKEGD V+ GQCRPLSKTVRFNVLKVIP G +K F
Sbjct: 108 VKEGDIVVCGQCRPLSKTVRFNVLKVIPNEIIGNVRKQFV 147
>gi|374633059|ref|ZP_09705426.1| archaeal ribosomal protein S17P [Metallosphaera yellowstonensis
MK1]
gi|373524543|gb|EHP69420.1| archaeal ribosomal protein S17P [Metallosphaera yellowstonensis
MK1]
Length = 111
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 69/106 (65%), Gaps = 5/106 (4%)
Query: 22 KSIGL-GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
K++G+ G + P + D+ CP+ G++ +RG ++ GT + +++ +V R YL++
Sbjct: 7 KNVGIPGVQQPNRVCD----DRDCPYHGSLRVRGLLIEGTLIKYRASKSGVVMRTYLYYD 62
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVL 126
KY+RYE+R S I H+ PC VKEGD VIIG+ RP+SK+V F VL
Sbjct: 63 GKYKRYERRSSKIHVHVPPCLDVKEGDKVIIGETRPISKSVSFVVL 108
>gi|337283654|ref|YP_004623128.1| 30S ribosomal protein S17P [Pyrococcus yayanosii CH1]
gi|334899588|gb|AEH23856.1| 30S ribosomal protein S17P [Pyrococcus yayanosii CH1]
Length = 114
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IGL + P E + D KCP+ G + + GR+ G S K +T+ V R Y H++K
Sbjct: 2 RDIGLRVQPPAEKCD----DPKCPWHGHLKVHGRVFEGIVVSDKPRKTVTVERQYYHYLK 57
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+RYE R S I AH PC K GD V+I + RPLSKT F V+ ++
Sbjct: 58 KYERYELRRSKIHAHNPPCINAKVGDRVLIAETRPLSKTKHFVVVAIL 105
>gi|242398289|ref|YP_002993713.1| 30S ribosomal protein S17P [Thermococcus sibiricus MM 739]
gi|242264682|gb|ACS89364.1| 30S ribosomal protein S17P [Thermococcus sibiricus MM 739]
Length = 111
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IGL + P E + D KCP+ G + GR+ G S K TI V R Y H+++
Sbjct: 2 RDIGLKIQPPAEKCD----DPKCPWHGHTKVHGRVFEGIVVSDKPRHTITVERQYYHYLR 57
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSG 135
KY+RYE R S + AH PC K GD VI+ + RPLSKT F V+ V G
Sbjct: 58 KYERYELRRSRVHAHNPPCVNAKAGDKVIVAETRPLSKTKSFVVIAVTQKAEEG 111
>gi|449066615|ref|YP_007433697.1| 30S ribosomal protein S17P [Sulfolobus acidocaldarius N8]
gi|449068889|ref|YP_007435970.1| 30S ribosomal protein S17P [Sulfolobus acidocaldarius Ron12/I]
gi|93140689|sp|Q4JB49.1|RS17_SULAC RecName: Full=30S ribosomal protein S17P
gi|68567051|gb|AAY79980.1| 30S ribosomal protein S17P [Sulfolobus acidocaldarius DSM 639]
gi|449035123|gb|AGE70549.1| 30S ribosomal protein S17P [Sulfolobus acidocaldarius N8]
gi|449037397|gb|AGE72822.1| 30S ribosomal protein S17P [Sulfolobus acidocaldarius Ron12/I]
Length = 114
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 14 GKGGNRFWKSIGL-GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIV 72
GK G + K++G+ G P + + Y CP+ G++ +RG +L G A+ NRT V
Sbjct: 2 GKKG-QLVKNVGIEGVSAPSKTCDDEY----CPYHGSLKVRGIVLEGKLIRARANRTGTV 56
Query: 73 RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
R Y+ + KY+RYE+R S I HI C VKEGD+VIIG+ RP++K++ F +L V
Sbjct: 57 EREYIFYDSKYKRYERRRSRIHVHIPSCLEVKEGDNVIIGESRPIAKSISFVILGV 112
>gi|312137085|ref|YP_004004422.1| 30S ribosomal protein S17 [Methanothermus fervidus DSM 2088]
gi|311224804|gb|ADP77660.1| SSU ribosomal protein S17P [Methanothermus fervidus DSM 2088]
Length = 107
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%)
Query: 41 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 100
D CPF G + +RG+IL G S K RT++V R Y ++ KY+RYE+R S I AH C
Sbjct: 15 DPNCPFHGNLRVRGQILEGVVASDKARRTVVVEREYYKYIPKYERYERRTSKITAHNPDC 74
Query: 101 FRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
K GD V IG+CRP+SKT F V++V+
Sbjct: 75 IGAKVGDKVKIGECRPISKTKSFVVIEVM 103
>gi|292656676|ref|YP_003536573.1| 30S ribosomal protein S17 [Haloferax volcanii DS2]
gi|291370917|gb|ADE03144.1| ribosomal protein S17 [Haloferax volcanii DS2]
Length = 114
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
Query: 23 SIGLGFKTPREAIEGTYID-KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+IGL P E + D +KCPF G++S+RG+ L GT S M +T+IV R Y FV
Sbjct: 2 AIGLDVPMPPEPDDSEAYDYEKCPFYGSLSVRGQTLEGTVVSTDMAKTVIVEREYDVFVP 61
Query: 82 KYQRYEKRHSNIPAHISPCF-RVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY RY KR S IPAH+ V GD V I + RPLSKT V++++
Sbjct: 62 KYDRYMKRRSRIPAHVPGVLDDVAVGDEVTIAETRPLSKTKSHVVVEIM 110
>gi|448411348|ref|ZP_21575813.1| 30S ribosomal protein S17P [Halosimplex carlsbadense 2-9-1]
gi|445670536|gb|ELZ23135.1| 30S ribosomal protein S17P [Halosimplex carlsbadense 2-9-1]
Length = 108
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
++GL + P + D CPF GT+S+RG+ + GT S M++T++V R Y V K
Sbjct: 2 ALGLNVQEPDAVCD----DDNCPFHGTLSVRGQTIEGTVASTDMDKTVVVEREYDVPVPK 57
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKT 120
Y R KR S +PAH C + EG+ V I +CRPLSKT
Sbjct: 58 YDRLMKRRSRVPAHAPECLDLDEGETVTIAECRPLSKT 95
>gi|15920633|ref|NP_376302.1| 30S ribosomal protein S17P [Sulfolobus tokodaii str. 7]
Length = 116
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 66/108 (61%), Gaps = 5/108 (4%)
Query: 20 FWKSIGL-GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
K+IG+ G P + + D CPF G + +RG IL G + +T +V R+YL
Sbjct: 10 LVKNIGIEGVNPPSKTCD----DINCPFHGNLRVRGIILEGRLIRYRAEKTGVVERDYLF 65
Query: 79 FVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVL 126
+ KY+RYE+R S I HI PC VKEGD+VII +CRP++K+V F V+
Sbjct: 66 YDTKYKRYERRRSRIHVHIPPCLDVKEGDNVIIAECRPIAKSVSFVVI 113
>gi|363548466|sp|Q975I9.2|RS17_SULTO RecName: Full=30S ribosomal protein S17P
gi|342306186|dbj|BAK54275.1| 30S ribosomal protein S17P [Sulfolobus tokodaii str. 7]
Length = 113
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 66/108 (61%), Gaps = 5/108 (4%)
Query: 20 FWKSIGL-GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
K+IG+ G P + + D CPF G + +RG IL G + +T +V R+YL
Sbjct: 7 LVKNIGIEGVNPPSKTCD----DINCPFHGNLRVRGIILEGRLIRYRAEKTGVVERDYLF 62
Query: 79 FVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVL 126
+ KY+RYE+R S I HI PC VKEGD+VII +CRP++K+V F V+
Sbjct: 63 YDTKYKRYERRRSRIHVHIPPCLDVKEGDNVIIAECRPIAKSVSFVVI 110
>gi|118431013|ref|NP_147178.2| 30S ribosomal protein S17 [Aeropyrum pernix K1]
gi|150421658|sp|Q9YF81.2|RS17_AERPE RecName: Full=30S ribosomal protein S17P
gi|116062339|dbj|BAA79315.2| 30S ribosomal protein S17P [Aeropyrum pernix K1]
Length = 114
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 60/96 (62%)
Query: 33 EAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSN 92
E E D CP+ GT+ +RG +L G A+ R ++V+ YL++ KKY RYE+R
Sbjct: 16 EPPEKVCSDPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLYYDKKYNRYERRSKK 75
Query: 93 IPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
I AH+ C VKEGD V+IG+ P+SKTV+F VL V
Sbjct: 76 IHAHLPDCISVKEGDVVVIGETMPISKTVKFTVLGV 111
>gi|375083284|ref|ZP_09730310.1| 30S ribosomal protein S17P [Thermococcus litoralis DSM 5473]
gi|374742015|gb|EHR78427.1| 30S ribosomal protein S17P [Thermococcus litoralis DSM 5473]
Length = 111
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IGL + P E + D KCP+ G + + GR+ G S K T+ V R + H++K
Sbjct: 2 RDIGLRIQPPAEKCD----DPKCPWHGRIKVHGRVFEGVVISDKPRHTVTVERQHYHYLK 57
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
KY+RYE R S I AH PC K GD VII + RPLSKT F V+ V
Sbjct: 58 KYERYELRRSRIHAHNPPCINAKPGDKVIIAETRPLSKTKSFVVIAV 104
>gi|52550173|gb|AAU84022.1| SSU ribosomal protein S17p [uncultured archaeon GZfos35D7]
Length = 107
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 65/110 (59%), Gaps = 5/110 (4%)
Query: 20 FWKSIGLG-FKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
++IGL P + E D CPF G + IRG++L G +KM++T+++ R +
Sbjct: 1 MARNIGLANVPIPSDTCE----DPNCPFHGKLPIRGQVLDGVVIGSKMDKTVVIERTHER 56
Query: 79 FVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
+ KY+RYEKR S I AH PC KEGD V I +CRPLSKT F V+ +
Sbjct: 57 KIFKYERYEKRSSRIHAHNPPCLNAKEGDTVRIAECRPLSKTKSFVVVSI 106
>gi|257387885|ref|YP_003177658.1| 30S ribosomal protein S17 [Halomicrobium mukohataei DSM 12286]
gi|257170192|gb|ACV47951.1| ribosomal protein S17 [Halomicrobium mukohataei DSM 12286]
Length = 108
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 62/112 (55%), Gaps = 5/112 (4%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
++GL + P EA D CPF GT+S+RG+ + G S M +T++V R Y V K
Sbjct: 2 ALGLNVQEPDEAC----ADDNCPFHGTLSVRGQTIEGEVASTDMEKTVVVEREYDVKVPK 57
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS 134
Y R KR S +PAH C + GD V I +CRPLSKT + +V+ I G
Sbjct: 58 YDRLMKRRSRVPAHAPDCLDLAVGDTVTIAECRPLSKT-KSHVVVAIEEGDD 108
>gi|162139951|ref|YP_255273.2| 30S ribosomal protein S17 [Sulfolobus acidocaldarius DSM 639]
Length = 108
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 67/108 (62%), Gaps = 5/108 (4%)
Query: 22 KSIGL-GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
K++G+ G P + + Y CP+ G++ +RG +L G A+ NRT V R Y+ +
Sbjct: 3 KNVGIEGVSAPSKTCDDEY----CPYHGSLKVRGIVLEGKLIRARANRTGTVEREYIFYD 58
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
KY+RYE+R S I HI C VKEGD+VIIG+ RP++K++ F +L V
Sbjct: 59 SKYKRYERRRSRIHVHIPSCLEVKEGDNVIIGESRPIAKSISFVILGV 106
>gi|344248766|gb|EGW04870.1| 40S ribosomal protein S11 [Cricetulus griseus]
Length = 79
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 57/78 (73%), Gaps = 4/78 (5%)
Query: 65 KMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRF 123
KM+RTI++ R+YLH+++KY R EK H N+ H+SPCFR V+ GD V +G+ RPLSKTV F
Sbjct: 2 KMHRTIVIHRDYLHYIQKYNRSEKLHKNMSVHLSPCFRDVQIGDIVTVGEGRPLSKTVLF 61
Query: 124 NVLKVIPAGSSGGAKKAF 141
NVLKV A G KK F
Sbjct: 62 NVLKVTKA---AGTKKQF 76
>gi|134045216|ref|YP_001096702.1| 30S ribosomal protein S17P [Methanococcus maripaludis C5]
gi|150402577|ref|YP_001329871.1| 30S ribosomal protein S17P [Methanococcus maripaludis C7]
gi|159905648|ref|YP_001549310.1| 30S ribosomal protein S17P [Methanococcus maripaludis C6]
gi|132662841|gb|ABO34487.1| SSU ribosomal protein S17P [Methanococcus maripaludis C5]
gi|150033607|gb|ABR65720.1| ribosomal protein S17 [Methanococcus maripaludis C7]
gi|159887141|gb|ABX02078.1| ribosomal protein S17 [Methanococcus maripaludis C6]
Length = 109
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 21 WKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
+IG+ K P E D CPF GT+S+RG+I GT S K + TI+++R ++
Sbjct: 1 MSNIGIDVKAPEHVCE----DPNCPFHGTLSVRGQIFEGTVTSDKGHDTIVLKREVTGYI 56
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
KY+RYEKR +++ AH C + K GD V + +CRP+SKT F V++
Sbjct: 57 SKYERYEKRTTSLVAHNPACIKAKVGDTVKVMECRPISKTKSFVVIE 103
>gi|150399470|ref|YP_001323237.1| 30S ribosomal protein S17P [Methanococcus vannielii SB]
gi|133826|sp|P14042.1|RS17_METVA RecName: Full=30S ribosomal protein S17P
gi|44757|emb|CAA34689.1| unnamed protein product [Methanococcus vannielii]
gi|150012173|gb|ABR54625.1| ribosomal protein S17 [Methanococcus vannielii SB]
Length = 109
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 63/107 (58%), Gaps = 4/107 (3%)
Query: 21 WKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
+IG+ K P E D CPF GT+S+RG+I G K + TI+++R ++
Sbjct: 1 MSNIGIDVKAPENVCE----DVNCPFHGTLSVRGQIFEGVVSGDKGHNTIVIKREVTGYI 56
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
KY+RYEKR +++ AH PC K GD V + +CRP+SKT F V++
Sbjct: 57 SKYERYEKRTTSLVAHNPPCINAKTGDVVKVMECRPVSKTKSFVVIE 103
>gi|448352606|ref|ZP_21541388.1| 30S ribosomal protein S17P [Natrialba hulunbeirensis JCM 10989]
gi|445642168|gb|ELY95238.1| 30S ribosomal protein S17P [Natrialba hulunbeirensis JCM 10989]
Length = 147
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 23 SIGLGFKTPREAIEGTYID-KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+IGL +TP E D +KCPF G +S+RG+IL G S M++T++V R Y V
Sbjct: 2 AIGLDVETPPEPANPEEYDYEKCPFYGELSVRGQILEGQVVSTDMDKTVVVEREYDVAVP 61
Query: 82 KYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 128
KY RY KR S IPAH+ + GD V I + RPLSKT V++V
Sbjct: 62 KYDRYMKRRSRIPAHVPGVLEPLSVGDTVKIAETRPLSKTKSHVVVEV 109
>gi|289193201|ref|YP_003459142.1| 30S ribosomal protein S17 [Methanocaldococcus sp. FS406-22]
gi|288939651|gb|ADC70406.1| ribosomal protein S17P [Methanocaldococcus sp. FS406-22]
Length = 117
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
++IG+ K P E DK CPF GT+ +RG+ G S K ++T+I++R + ++K
Sbjct: 4 RNIGIPVKAP----EVECDDKNCPFHGTLPVRGQSFVGVVVSDKPHKTVIIKREIIKYIK 59
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
KY+RYE+R S + AH PC K GD V + +CRP+SKT F V++
Sbjct: 60 KYERYERRTSKLAAHNPPCINAKVGDIVRVMECRPISKTKAFVVVE 105
>gi|289579907|ref|YP_003478373.1| 30S ribosomal protein S17 [Natrialba magadii ATCC 43099]
gi|448281147|ref|ZP_21472455.1| 30S ribosomal protein S17P [Natrialba magadii ATCC 43099]
gi|448358813|ref|ZP_21547487.1| 30S ribosomal protein S17P [Natrialba chahannaoensis JCM 10990]
gi|289529460|gb|ADD03811.1| ribosomal protein S17P [Natrialba magadii ATCC 43099]
gi|445579471|gb|ELY33865.1| 30S ribosomal protein S17P [Natrialba magadii ATCC 43099]
gi|445644493|gb|ELY97506.1| 30S ribosomal protein S17P [Natrialba chahannaoensis JCM 10990]
Length = 147
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 23 SIGLGFKTPREAIEGTYID-KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+IGL +TP E D +KCPF G +S+RG+IL G S M++T++V R Y V
Sbjct: 2 AIGLDVETPPEPANPEEYDYEKCPFYGELSVRGQILEGQVVSTDMDKTVVVEREYDVAVP 61
Query: 82 KYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 128
KY RY KR S IPAH+ + GD V I + RPLSKT V++V
Sbjct: 62 KYDRYMKRRSRIPAHVPGVLEPLSVGDTVKIAETRPLSKTKSHVVVEV 109
>gi|193083746|gb|ACF09433.1| ribosomal protein S11/S17 [uncultured marine group II euryarchaeote
SAT1000-15-B12]
Length = 110
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IG+ KTP +G+ CPF G++ +RG+I+ GT S+ M +I+V R ++K
Sbjct: 2 RDIGIDVKTPEGEWDGS---DSCPFHGSLRLRGQIIEGTVFSSGMTDSIVVERETTRYMK 58
Query: 82 KYQRYEKRHSNIPAHISPCF-RVKEGDHVIIGQCRPLSKTVRFNVLK 127
KY+RYEKR AH+ C V GD V I +CRPLSKT++F V++
Sbjct: 59 KYERYEKRTRRYSAHLPSCIGGVAAGDKVRIMECRPLSKTIKFCVIE 105
>gi|296109311|ref|YP_003616260.1| 30S ribosomal protein S17 [methanocaldococcus infernus ME]
gi|295434125|gb|ADG13296.1| ribosomal protein S17P [Methanocaldococcus infernus ME]
Length = 119
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 67/107 (62%), Gaps = 5/107 (4%)
Query: 22 KSIGL-GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
K+IG+ G K P E DK CPF G + +RG+ G S K ++T+I++R + ++
Sbjct: 5 KNIGVPGVKVP----EVECDDKNCPFHGNLPVRGQSFVGVVVSDKPSKTVIIKREIIKYI 60
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
KKY+RYE+R S + AH PC + GD V + +CRP+SKT RF V++
Sbjct: 61 KKYERYERRTSKLAAHNPPCIHARAGDIVRVMECRPISKTKRFVVIE 107
>gi|212223221|ref|YP_002306457.1| 30S ribosomal protein S17 [Thermococcus onnurineus NA1]
gi|212008178|gb|ACJ15560.1| hypothetical 30S ribosomal protein S17 [Thermococcus onnurineus
NA1]
Length = 111
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IGL + P E + D CP+ G + I GR G S K RT+ V R + H++K
Sbjct: 2 REIGLKIQPPAEKCD----DPHCPWHGNLKIHGRYFEGIVISDKPKRTVTVERQHYHYLK 57
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+RYE R S I AH PC K GD V+I + RPLSKT F V+ ++
Sbjct: 58 KYERYELRRSRIHAHNPPCINAKPGDKVLIAETRPLSKTKSFVVVGIL 105
>gi|45358971|ref|NP_988528.1| 30S ribosomal protein S17P [Methanococcus maripaludis S2]
gi|340624718|ref|YP_004743171.1| 30S ribosomal protein S17 [Methanococcus maripaludis X1]
gi|74572144|sp|Q6LXE4.1|RS17_METMP RecName: Full=30S ribosomal protein S17P
gi|45047837|emb|CAF30964.1| SSU ribosomal protein S17P [Methanococcus maripaludis S2]
gi|339904986|gb|AEK20428.1| 30S ribosomal protein S17P [Methanococcus maripaludis X1]
Length = 109
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
Query: 21 WKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
+IG+ K P E D CPF GT+S+RG+I G S K + TI+++R ++
Sbjct: 1 MSNIGIDVKAPENVCE----DPNCPFHGTLSVRGQIFEGIVTSDKGHDTIVIKREVTGYI 56
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
KY+RYEKR +++ AH C + K GD V + +CRP+SKT F V++
Sbjct: 57 SKYERYEKRTTSLVAHNPACIKAKVGDTVKVMECRPISKTKSFVVIE 103
>gi|268323285|emb|CBH36873.1| 30S ribosomal protein S17P [uncultured archaeon]
Length = 107
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
Query: 21 WKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
++IG+ K P + E D CPF G + +RG+IL G S K ++T++V R L +
Sbjct: 1 MRNIGIEVKNPDKECE----DVNCPFHGKLPVRGQILEGMVISDKAHKTVVVLRTNLKKI 56
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
+KY+R+E R S I AH PC K GD V I +CRPLSKT F V++
Sbjct: 57 RKYERFEPRRSKISAHNPPCINAKVGDVVKIAECRPLSKTKSFVVVE 103
>gi|193084307|gb|ACF09966.1| ribosomal protein S11/S17 [uncultured marine group II euryarchaeote
KM3-130-D10]
Length = 110
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IG+ KTP +G+ CPF G++ +RG+I+ GT S+ M +I+V R ++K
Sbjct: 2 RDIGVDVKTPEGEWDGS---DSCPFHGSLRLRGQIIEGTVFSSGMTDSIVVERKTTRYMK 58
Query: 82 KYQRYEKRHSNIPAHISPCF-RVKEGDHVIIGQCRPLSKTVRFNVLK 127
KY+RYEKR AH+ C V GD V I +CRPLSKT++F V++
Sbjct: 59 KYERYEKRTRRYSAHLPSCIGGVAAGDRVRIMECRPLSKTIKFCVIE 105
>gi|333910784|ref|YP_004484517.1| 30S ribosomal protein S17 [Methanotorris igneus Kol 5]
gi|333751373|gb|AEF96452.1| ribosomal protein S17P [Methanotorris igneus Kol 5]
Length = 115
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 67/107 (62%), Gaps = 4/107 (3%)
Query: 21 WKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
++IG+ P++ DK CPF GT+S+RG++ G S K ++T++++R + ++
Sbjct: 1 MRNIGIPVNAPKKECN----DKNCPFHGTLSVRGQMFEGVVVSDKAHKTVVIKREIVKYL 56
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
KKY+RYEKR S + AH C K GD V + +CRP+SKT F V++
Sbjct: 57 KKYERYEKRTSKLVAHNPECINAKVGDIVRVMECRPISKTKSFVVIE 103
>gi|336121755|ref|YP_004576530.1| 30S ribosomal protein S17P [Methanothermococcus okinawensis IH1]
gi|334856276|gb|AEH06752.1| ribosomal protein S17P [Methanothermococcus okinawensis IH1]
Length = 122
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 66/111 (59%), Gaps = 4/111 (3%)
Query: 17 GNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNY 76
G ++IG+ K+P E T DK CPF G + +RG++ G S K + T++++R
Sbjct: 10 GGIIMRNIGIDVKSP----ENTCNDKDCPFHGNLPVRGQVFEGIVVSDKGHNTVVIKREI 65
Query: 77 LHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
+ ++ KY+RYEKR + + AH C K GD V I +CRP+SKT F V++
Sbjct: 66 VSYIPKYERYEKRTATMVAHNPSCIGAKVGDKVKIAECRPISKTKSFVVVE 116
>gi|300710384|ref|YP_003736198.1| 30S ribosomal protein S17P [Halalkalicoccus jeotgali B3]
gi|448294708|ref|ZP_21484787.1| 30S ribosomal protein S17P [Halalkalicoccus jeotgali B3]
gi|299124067|gb|ADJ14406.1| 30S ribosomal protein S17P [Halalkalicoccus jeotgali B3]
gi|445586385|gb|ELY40667.1| 30S ribosomal protein S17P [Halalkalicoccus jeotgali B3]
Length = 143
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
+IGL +TP E + Y +KCPF G + +RG++L G SA M++T+IV R Y FV K
Sbjct: 2 AIGLDVETPPEPDDPDYDYEKCPFYGELPVRGQVLEGIVASADMDKTVIVEREYDVFVPK 61
Query: 83 YQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 128
Y RY KR S +PAH+ V GD V I + RPLSKT V++V
Sbjct: 62 YDRYMKRRSRVPAHVPGVLDHVSVGDRVKIAETRPLSKTKSHVVVEV 108
>gi|397652537|ref|YP_006493118.1| 30S ribosomal protein S17 [Pyrococcus furiosus COM1]
gi|393190128|gb|AFN04826.1| 30S ribosomal protein S17P [Pyrococcus furiosus COM1]
Length = 112
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IGL + P E + D KCP+ G + I GR+ G S K +T+ V R Y ++
Sbjct: 2 RDIGLRVQPPAEKCD----DPKCPWHGNLKIHGRVFEGIVVSDKPRKTVTVERQYYFYLN 57
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+RYE R S I AH PC K GD V+I + RPLSKT F V+ V+
Sbjct: 58 KYERYELRRSKIHAHNPPCINAKVGDKVLIAETRPLSKTKHFVVVAVL 105
>gi|18978187|ref|NP_579544.1| 30S ribosomal protein S17 [Pyrococcus furiosus DSM 3638]
gi|74580731|sp|Q8U008.1|RS17_PYRFU RecName: Full=30S ribosomal protein S17P
gi|428697922|pdb|3J20|R Chain R, Promiscuous Behavior Of Proteins In Archaeal Ribosomes
Revealed By Cryo-em: Implications For Evolution Of
Eukaryotic Ribosomes (30s Ribosomal Subunit)
gi|18893996|gb|AAL81939.1| SSU ribosomal protein S17P [Pyrococcus furiosus DSM 3638]
Length = 113
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IGL + P E + D KCP+ G + I GR+ G S K +T+ V R Y ++
Sbjct: 3 RDIGLRVQPPAEKCD----DPKCPWHGNLKIHGRVFEGIVVSDKPRKTVTVERQYYFYLN 58
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+RYE R S I AH PC K GD V+I + RPLSKT F V+ V+
Sbjct: 59 KYERYELRRSKIHAHNPPCINAKVGDKVLIAETRPLSKTKHFVVVAVL 106
>gi|256810637|ref|YP_003128006.1| 30S ribosomal protein S17 [Methanocaldococcus fervens AG86]
gi|256793837|gb|ACV24506.1| ribosomal protein S17P [Methanocaldococcus fervens AG86]
Length = 117
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 65/106 (61%), Gaps = 4/106 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
K+IG+ K P E DK CPF GT+ +RG+ G S K +T+I++R + +++
Sbjct: 4 KNIGIPVKAP----EVECDDKNCPFHGTLPVRGQSFVGVVVSDKPQKTVIIKREVVKYLR 59
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
KY+RYE+R + + AH PC K GD V + +CRP+SKT F V++
Sbjct: 60 KYERYERRTTKLAAHNPPCINAKVGDIVRVMECRPISKTKAFVVVE 105
>gi|448436261|ref|ZP_21587062.1| 30S ribosomal protein S17P [Halorubrum tebenquichense DSM 14210]
gi|448535699|ref|ZP_21622219.1| 30S ribosomal protein S17P [Halorubrum hochstenium ATCC 700873]
gi|445682929|gb|ELZ35339.1| 30S ribosomal protein S17P [Halorubrum tebenquichense DSM 14210]
gi|445703200|gb|ELZ55135.1| 30S ribosomal protein S17P [Halorubrum hochstenium ATCC 700873]
Length = 114
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 23 SIGLGFKTPREAIEGTYID-KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+IG+ TP E D +KCPF G +S+RG+ GT S M +T+IV R Y FV
Sbjct: 2 AIGIDVPTPPEPDNPEDYDYEKCPFYGQLSVRGQTREGTVVSTDMEKTVIVEREYDVFVP 61
Query: 82 KYQRYEKRHSNIPAHISPCFRVKE-GDHVIIGQCRPLSKTVRFNVLKVI 129
KY RY KR S IPAH+ E GD V I + RPLSKT V++++
Sbjct: 62 KYDRYMKRRSRIPAHVPGVLDSLEVGDEVTIAETRPLSKTKSHVVVEIL 110
>gi|47079414|gb|AAT10157.1| ribosomal protein S11/S17 [uncultured marine group II euryarchaeote
DeepAnt-JyKC7]
Length = 110
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 63/107 (58%), Gaps = 4/107 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IG+ P +G DK CPF G++ +RG+I+ GT M +I+V+R ++K
Sbjct: 2 RDIGVDIVAPEGDWDG---DKNCPFYGSLRVRGQIIEGTVSMTGMTNSIVVKREVTRYMK 58
Query: 82 KYQRYEKRHSNIPAHISPCF-RVKEGDHVIIGQCRPLSKTVRFNVLK 127
K++RYEKR AH+ C V GD V I +CRPLSKTV F V++
Sbjct: 59 KFERYEKRTRRYAAHLPSCIGEVSSGDRVRIMECRPLSKTVNFCVIE 105
>gi|448565524|ref|ZP_21636391.1| 30S ribosomal protein S17P [Haloferax prahovense DSM 18310]
gi|448606204|ref|ZP_21658783.1| 30S ribosomal protein S17P [Haloferax sulfurifontis ATCC BAA-897]
gi|448623089|ref|ZP_21669738.1| 30S ribosomal protein S17P [Haloferax denitrificans ATCC 35960]
gi|445715268|gb|ELZ67024.1| 30S ribosomal protein S17P [Haloferax prahovense DSM 18310]
gi|445739621|gb|ELZ91128.1| 30S ribosomal protein S17P [Haloferax sulfurifontis ATCC BAA-897]
gi|445753597|gb|EMA05014.1| 30S ribosomal protein S17P [Haloferax denitrificans ATCC 35960]
Length = 106
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
+KCPF G++S+RG+ L GT S M +T+IV R Y FV KY RY KR S IPAH+
Sbjct: 14 EKCPFYGSLSVRGQTLEGTVVSTDMAKTVIVEREYDVFVPKYDRYMKRRSRIPAHVPGVL 73
Query: 102 -RVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
V GD V I + RPLSKT V+++I
Sbjct: 74 DDVAVGDEVTIAETRPLSKTKSHVVVEII 102
>gi|288931519|ref|YP_003435579.1| 30S ribosomal protein S17 [Ferroglobus placidus DSM 10642]
gi|288893767|gb|ADC65304.1| ribosomal protein S17P [Ferroglobus placidus DSM 10642]
Length = 106
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 64/109 (58%), Gaps = 5/109 (4%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
+ IGL K P + + DK CPF G +S+RG+IL G + M +T ++ R + +
Sbjct: 1 MVRDIGLNVKAPEKECD----DKNCPFHGNLSVRGQILTGRVVKSYM-KTAVIERELIKY 55
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
V KY+RY K+ S + AH PC K GD V I +CRP+SKT F +++V
Sbjct: 56 VPKYERYMKKRSKLHAHNPPCIDAKPGDIVTIAECRPISKTKSFVIVEV 104
>gi|448583479|ref|ZP_21646835.1| 30S ribosomal protein S17P [Haloferax gibbonsii ATCC 33959]
gi|445729708|gb|ELZ81303.1| 30S ribosomal protein S17P [Haloferax gibbonsii ATCC 33959]
Length = 106
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
+KCPF G++S+RG+ L GT S M +T+IV R Y FV KY RY KR S IPAH+
Sbjct: 14 EKCPFYGSLSVRGQTLEGTVVSTDMAKTVIVEREYDVFVPKYDRYMKRRSRIPAHVPGVL 73
Query: 102 -RVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
V GD V I + RPLSKT V+++I
Sbjct: 74 DDVAVGDEVTIAETRPLSKTKSHVVVEII 102
>gi|48477721|ref|YP_023427.1| 30S ribosomal protein S17 [Picrophilus torridus DSM 9790]
gi|74567862|sp|Q6L1B8.1|RS17_PICTO RecName: Full=30S ribosomal protein S17P
gi|48430369|gb|AAT43234.1| small subunit ribosomal protein S17P [Picrophilus torridus DSM
9790]
Length = 106
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 21 WKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
++IG+ K P E T D KCPF G + I G+I+ GT S KMN +I+++R +
Sbjct: 1 MENIGIDVKKP----ERTCNDPKCPFHGNLRIHGQIIVGTVVSTKMNGSIVLKRESRRLI 56
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
KKY+RYE + S AH+ C V+ GD V I +CR L+KT+ F V++
Sbjct: 57 KKYERYETKISKFHAHLPGCIDVRPGDRVKIAECRKLAKTISFVVVE 103
>gi|448578192|ref|ZP_21643627.1| 30S ribosomal protein S17P [Haloferax larsenii JCM 13917]
gi|448592788|ref|ZP_21651835.1| 30S ribosomal protein S17P [Haloferax elongans ATCC BAA-1513]
gi|445726733|gb|ELZ78349.1| 30S ribosomal protein S17P [Haloferax larsenii JCM 13917]
gi|445730814|gb|ELZ82401.1| 30S ribosomal protein S17P [Haloferax elongans ATCC BAA-1513]
Length = 106
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
+KCPF G++S+RG+ L GT S M +T+IV R Y FV KY RY KR S IPAH+
Sbjct: 14 EKCPFYGSLSVRGQTLEGTVVSTDMEKTVIVEREYDVFVPKYDRYMKRRSRIPAHVPGVL 73
Query: 102 -RVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
V GD V I + RPLSKT V++++
Sbjct: 74 DDVAVGDEVTIAETRPLSKTKSHVVVEIM 102
>gi|389848008|ref|YP_006350247.1| 30S ribosomal protein S17 [Haloferax mediterranei ATCC 33500]
gi|448611738|ref|ZP_21662168.1| 30S ribosomal protein S17P [Haloferax mucosum ATCC BAA-1512]
gi|448618105|ref|ZP_21666450.1| 30S ribosomal protein S17P [Haloferax mediterranei ATCC 33500]
gi|388245314|gb|AFK20260.1| 30S ribosomal protein S17P [Haloferax mediterranei ATCC 33500]
gi|445742499|gb|ELZ93993.1| 30S ribosomal protein S17P [Haloferax mucosum ATCC BAA-1512]
gi|445747660|gb|ELZ99115.1| 30S ribosomal protein S17P [Haloferax mediterranei ATCC 33500]
Length = 114
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
+KCPF G++S+RG+ L GT S M +T+IV R Y FV KY RY KR S IPAH+
Sbjct: 22 EKCPFYGSLSVRGQTLEGTVVSTDMAKTVIVEREYDVFVPKYDRYMKRRSRIPAHVPGVL 81
Query: 102 -RVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
V GD V I + RPLSKT V+++I
Sbjct: 82 DDVAVGDEVTIAETRPLSKTKSHVVVEII 110
>gi|433638924|ref|YP_007284684.1| archaeal ribosomal protein S17P [Halovivax ruber XH-70]
gi|448377815|ref|ZP_21560511.1| 30S ribosomal protein S17P [Halovivax asiaticus JCM 14624]
gi|433290728|gb|AGB16551.1| archaeal ribosomal protein S17P [Halovivax ruber XH-70]
gi|445655759|gb|ELZ08604.1| 30S ribosomal protein S17P [Halovivax asiaticus JCM 14624]
Length = 149
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 23 SIGLGFKTPREAIEGTYID-KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+IGL TP E D +KCPF G + +RG++L G S M++T++V R Y V
Sbjct: 2 AIGLDVDTPPEPANPEEYDYEKCPFYGELPVRGQVLEGQVVSTDMDKTVVVEREYDVAVP 61
Query: 82 KYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 128
KY RY KR S IPAH+ + GD V I + RPLSKT V++V
Sbjct: 62 KYDRYMKRRSRIPAHVPGVLEPLSVGDSVKIAETRPLSKTKSHVVVEV 109
>gi|448503703|ref|ZP_21613332.1| 30S ribosomal protein S17P [Halorubrum coriense DSM 10284]
gi|445691904|gb|ELZ44087.1| 30S ribosomal protein S17P [Halorubrum coriense DSM 10284]
Length = 114
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 23 SIGLGFKTPREAIEGTYID-KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+IG+ TP E D +KCPF G +S+RG+ GT S M +T+IV R Y FV
Sbjct: 2 AIGIDVPTPPEPDNPEDYDYEKCPFYGQLSVRGQTREGTVVSTDMEKTVIVEREYDVFVP 61
Query: 82 KYQRYEKRHSNIPAHISPCFRVKE-GDHVIIGQCRPLSKTVRFNVLKV 128
KY RY KR S IPAH+ E GD V I + RPLSKT V+++
Sbjct: 62 KYDRYMKRRSRIPAHVPGVLDSLEVGDEVTIAETRPLSKTKSHVVVEI 109
>gi|261402347|ref|YP_003246571.1| 30S ribosomal protein S17 [Methanocaldococcus vulcanius M7]
gi|261369340|gb|ACX72089.1| ribosomal protein S17P [Methanocaldococcus vulcanius M7]
Length = 117
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 65/106 (61%), Gaps = 4/106 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
K+IG+ KTP E DK CPF G + +RG+ G S K + T+I++R + ++K
Sbjct: 4 KNIGIKVKTP----EVECNDKNCPFHGNLPVRGQSFVGVVVSDKPHNTVIIKREVVKYLK 59
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
KY+RYE+R + + AH PC + GD V + +CRP+SKT F V++
Sbjct: 60 KYERYERRSAKLAAHNPPCIHARVGDIVRVMECRPISKTKAFVVVE 105
>gi|57641467|ref|YP_183945.1| 30S ribosomal protein S17 [Thermococcus kodakarensis KOD1]
gi|74502401|sp|Q5JDH9.1|RS17_PYRKO RecName: Full=30S ribosomal protein S17P
gi|57159791|dbj|BAD85721.1| SSU ribosomal protein S17P [Thermococcus kodakarensis KOD1]
Length = 114
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 62/108 (57%), Gaps = 4/108 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IGL + P E D KCP+ G + I GR + G S K +T++V R Y H++K
Sbjct: 2 REIGLRVQPPAEVCN----DPKCPWHGNLKIHGRYVEGIVVSDKGKKTVVVERQYYHYLK 57
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+RYE R S + AH C K GD V+I + RP+SKT + V+ V+
Sbjct: 58 KYERYELRKSKVHAHNPECINAKVGDKVLIAETRPISKTKSWVVVAVL 105
>gi|433420028|ref|ZP_20405414.1| 30S ribosomal protein S17P [Haloferax sp. BAB2207]
gi|448290680|ref|ZP_21481826.1| 30S ribosomal protein S17P [Haloferax volcanii DS2]
gi|448545977|ref|ZP_21626304.1| 30S ribosomal protein S17P [Haloferax sp. ATCC BAA-646]
gi|448548051|ref|ZP_21627395.1| 30S ribosomal protein S17P [Haloferax sp. ATCC BAA-645]
gi|448557074|ref|ZP_21632509.1| 30S ribosomal protein S17P [Haloferax sp. ATCC BAA-644]
gi|448569079|ref|ZP_21638491.1| 30S ribosomal protein S17P [Haloferax lucentense DSM 14919]
gi|448600502|ref|ZP_21655998.1| 30S ribosomal protein S17P [Haloferax alexandrinus JCM 10717]
gi|432199285|gb|ELK55476.1| 30S ribosomal protein S17P [Haloferax sp. BAB2207]
gi|445578051|gb|ELY32466.1| 30S ribosomal protein S17P [Haloferax volcanii DS2]
gi|445703323|gb|ELZ55254.1| 30S ribosomal protein S17P [Haloferax sp. ATCC BAA-646]
gi|445714753|gb|ELZ66511.1| 30S ribosomal protein S17P [Haloferax sp. ATCC BAA-645]
gi|445714943|gb|ELZ66700.1| 30S ribosomal protein S17P [Haloferax sp. ATCC BAA-644]
gi|445725229|gb|ELZ76854.1| 30S ribosomal protein S17P [Haloferax lucentense DSM 14919]
gi|445735219|gb|ELZ86771.1| 30S ribosomal protein S17P [Haloferax alexandrinus JCM 10717]
Length = 106
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
+KCPF G++S+RG+ L GT S M +T+IV R Y FV KY RY KR S IPAH+
Sbjct: 14 EKCPFYGSLSVRGQTLEGTVVSTDMAKTVIVEREYDVFVPKYDRYMKRRSRIPAHVPGVL 73
Query: 102 -RVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
V GD V I + RPLSKT V++++
Sbjct: 74 DDVAVGDEVTIAETRPLSKTKSHVVVEIM 102
>gi|148694020|gb|EDL25967.1| ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1
(Drosophila), isoform CRA_a [Mus musculus]
Length = 532
Score = 86.3 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 44/82 (53%), Positives = 55/82 (67%), Gaps = 15/82 (18%)
Query: 4 QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKCPFTG 48
QTE+A+ KQP G+ G R++K+I LGF+TP+EAI+GTYIDKKCPFTG
Sbjct: 19 QTERAYQKQPTIFQNKKWVLLGETGKEKLPRYYKNISLGFRTPKEAIKGTYIDKKCPFTG 78
Query: 49 TVSIRGRILAGTCHSAKMNRTI 70
VSI GRIL+G KM RT+
Sbjct: 79 NVSICGRILSGVVTKMKMQRTV 100
>gi|146302885|ref|YP_001190201.1| 30S ribosomal protein S17 [Metallosphaera sedula DSM 5348]
gi|145701135|gb|ABP94277.1| SSU ribosomal protein S17P [Metallosphaera sedula DSM 5348]
Length = 111
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 64/106 (60%), Gaps = 5/106 (4%)
Query: 22 KSIGL-GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
K++G+ G P E D+ CPF G++ +RG ++ GT + + ++ R YL +
Sbjct: 7 KNVGIPGITPPSRECE----DEDCPFHGSLKVRGTLIEGTLVKNRAPKMGVIERTYLFYD 62
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVL 126
KY+RYE+R S I A + C VKEGD VIIG+ RPLSK+V F VL
Sbjct: 63 HKYKRYERRTSRIHARVPSCLDVKEGDRVIIGETRPLSKSVSFVVL 108
>gi|284162451|ref|YP_003401074.1| 30S ribosomal protein S17 [Archaeoglobus profundus DSM 5631]
gi|284012448|gb|ADB58401.1| ribosomal protein S17 [Archaeoglobus profundus DSM 5631]
Length = 106
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
K IG+ K P E DK CPF G + +RG+IL G +T ++ R + +
Sbjct: 1 MVKDIGIDVKPP----ERECNDKNCPFHGDLRVRGQILTGKVVKT-YEKTAVIERELIRY 55
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
V KY+RY KR S I AH PC K GD V+I +CRP+SKT F +++V+
Sbjct: 56 VPKYERYLKRRSKIHAHNPPCINAKPGDTVVIAECRPISKTKSFVIVEVV 105
>gi|448489449|ref|ZP_21607672.1| 30S ribosomal protein S17P [Halorubrum californiensis DSM 19288]
gi|445694821|gb|ELZ46939.1| 30S ribosomal protein S17P [Halorubrum californiensis DSM 19288]
Length = 114
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 23 SIGLGFKTPREAIEGTYID-KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+IG+ TP E D +KCPF G +S+RG+ GT S M +T+IV R Y FV
Sbjct: 2 AIGIDVPTPPEPDNPEDYDYEKCPFYGQLSVRGQTREGTVVSTDMAKTVIVEREYDVFVP 61
Query: 82 KYQRYEKRHSNIPAHISPCFRVKE-GDHVIIGQCRPLSKTVRFNVLKV 128
KY RY KR S IPAH+ E GD V I + RPLSKT V+++
Sbjct: 62 KYDRYMKRRSRIPAHVPGVLDSLEVGDEVTIAETRPLSKTKSHVVVEI 109
>gi|374635649|ref|ZP_09707243.1| ribosomal protein S17P [Methanotorris formicicus Mc-S-70]
gi|373561502|gb|EHP87735.1| ribosomal protein S17P [Methanotorris formicicus Mc-S-70]
Length = 115
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 21 WKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
++IG+ P E DK CPF GT+ +RG++ G S K ++T++++R + ++
Sbjct: 1 MRNIGIPVNVP----EKECNDKNCPFHGTLPVRGQMFEGIVVSDKAHKTVVIKREIVKYL 56
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
KKY+RYEKR S + AH C K GD V + +CRP+SKT F V++
Sbjct: 57 KKYERYEKRTSKLVAHNPECINAKVGDVVRVMECRPISKTKSFVVVE 103
>gi|222480848|ref|YP_002567085.1| 30S ribosomal protein S17P [Halorubrum lacusprofundi ATCC 49239]
gi|448460068|ref|ZP_21596988.1| 30S ribosomal protein S17P [Halorubrum lipolyticum DSM 21995]
gi|448463239|ref|ZP_21598017.1| 30S ribosomal protein S17P [Halorubrum kocurii JCM 14978]
gi|448475301|ref|ZP_21603019.1| 30S ribosomal protein S17P [Halorubrum aidingense JCM 13560]
gi|222453750|gb|ACM58015.1| ribosomal protein S17 [Halorubrum lacusprofundi ATCC 49239]
gi|445807786|gb|EMA57867.1| 30S ribosomal protein S17P [Halorubrum lipolyticum DSM 21995]
gi|445816772|gb|EMA66659.1| 30S ribosomal protein S17P [Halorubrum aidingense JCM 13560]
gi|445817234|gb|EMA67110.1| 30S ribosomal protein S17P [Halorubrum kocurii JCM 14978]
Length = 114
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 23 SIGLGFKTPREAIEGTYID-KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+IG+ TP E D +KCPF G +S+RG+ GT S M +T+IV R Y FV
Sbjct: 2 AIGIDVPTPPEPDNPEDYDYEKCPFYGQLSVRGQTREGTVVSTDMEKTVIVEREYDVFVP 61
Query: 82 KYQRYEKRHSNIPAHISPCFRVKE-GDHVIIGQCRPLSKT 120
KY RY KR S IPAH+ E GD V I + RPLSKT
Sbjct: 62 KYDRYMKRRSRIPAHVPGVLDSLEVGDEVKIAETRPLSKT 101
>gi|15668642|ref|NP_247440.1| 30S ribosomal protein S17 [Methanocaldococcus jannaschii DSM 2661]
gi|1710745|sp|P54036.1|RS17_METJA RecName: Full=30S ribosomal protein S17P
gi|1591167|gb|AAB98454.1| SSU ribosomal protein S17P (rpsQ) [Methanocaldococcus jannaschii
DSM 2661]
Length = 117
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 65/106 (61%), Gaps = 4/106 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
++IG+ K P E DK CPF G + +RG+ G S K ++T+I++R + ++K
Sbjct: 4 RNIGIQVKAP----EVECDDKNCPFHGNLPVRGQSFVGVVVSDKPHKTVIIKREVVKYIK 59
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
KY+RYE+R + + AH PC + GD V + +CRP+SKT F V++
Sbjct: 60 KYERYERRTTKLAAHNPPCIHARVGDIVRVMECRPISKTKAFVVVE 105
>gi|322372159|ref|ZP_08046700.1| 30S ribosomal protein S17P [Haladaptatus paucihalophilus DX253]
gi|320548168|gb|EFW89841.1| 30S ribosomal protein S17P [Haladaptatus paucihalophilus DX253]
Length = 110
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
++GL P EGT + CPF G++S+RG+I+ G S M++T++V R Y V K
Sbjct: 2 ALGLNVSEP----EGTCSHEDCPFHGSLSVRGQIIEGEVASTDMDKTVVVEREYDVTVPK 57
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKT 120
Y R KR S +PAH C ++ GD V I + RPLSKT
Sbjct: 58 YDRQMKRRSRVPAHAPECMTLEVGDTVRIAETRPLSKT 95
>gi|297619579|ref|YP_003707684.1| 30S ribosomal protein S17P [Methanococcus voltae A3]
gi|297378556|gb|ADI36711.1| ribosomal protein S17P [Methanococcus voltae A3]
Length = 108
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
+IG+ KTP + D CPF G + +RG+ G S K + T+++ R + ++ K
Sbjct: 3 NIGIDVKTPENVCD----DINCPFHGKLPVRGQTFEGVVTSDKGHNTVVIEREIIRYLSK 58
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
Y+RYEKR ++ AH SPC K GD V I +CRP+SKT F V++
Sbjct: 59 YERYEKRTVSMIAHNSPCIAAKVGDIVKIMECRPISKTKSFVVIE 103
>gi|150401815|ref|YP_001325581.1| 30S ribosomal protein S17 [Methanococcus aeolicus Nankai-3]
gi|150014518|gb|ABR56969.1| ribosomal protein S17 [Methanococcus aeolicus Nankai-3]
Length = 109
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Query: 21 WKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
++IG+ K+P E D CPF G + +RG++ G S K + I+++R+ + ++
Sbjct: 1 MRNIGIDVKSP----ENECNDNDCPFHGNLPVRGQVFEGIVVSDKGHNAIVIKRDVVRYI 56
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+RYEKR + + AH C K GD V I +CRP+SKT F V++ I
Sbjct: 57 PKYERYEKRTTTMVAHCPSCIDAKIGDKVKIAECRPISKTKSFVVIEKI 105
>gi|448426498|ref|ZP_21583347.1| 30S ribosomal protein S17P [Halorubrum terrestre JCM 10247]
gi|448441440|ref|ZP_21589103.1| 30S ribosomal protein S17P [Halorubrum saccharovorum DSM 1137]
gi|448452132|ref|ZP_21593152.1| 30S ribosomal protein S17P [Halorubrum litoreum JCM 13561]
gi|448484343|ref|ZP_21606050.1| 30S ribosomal protein S17P [Halorubrum arcis JCM 13916]
gi|448508619|ref|ZP_21615570.1| 30S ribosomal protein S17P [Halorubrum distributum JCM 9100]
gi|448517698|ref|ZP_21617272.1| 30S ribosomal protein S17P [Halorubrum distributum JCM 10118]
gi|445679378|gb|ELZ31845.1| 30S ribosomal protein S17P [Halorubrum terrestre JCM 10247]
gi|445688849|gb|ELZ41096.1| 30S ribosomal protein S17P [Halorubrum saccharovorum DSM 1137]
gi|445697245|gb|ELZ49315.1| 30S ribosomal protein S17P [Halorubrum distributum JCM 9100]
gi|445705913|gb|ELZ57801.1| 30S ribosomal protein S17P [Halorubrum distributum JCM 10118]
gi|445809776|gb|EMA59814.1| 30S ribosomal protein S17P [Halorubrum litoreum JCM 13561]
gi|445820118|gb|EMA69947.1| 30S ribosomal protein S17P [Halorubrum arcis JCM 13916]
Length = 114
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 23 SIGLGFKTPREAIEGTYID-KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+IG+ TP E D +KCPF G +S+RG+ GT S M +T+IV R Y FV
Sbjct: 2 AIGIDVPTPPEPDNPEDYDYEKCPFYGQLSVRGQTREGTVVSTDMAKTVIVEREYDVFVP 61
Query: 82 KYQRYEKRHSNIPAHISPCFRVKE-GDHVIIGQCRPLSKT 120
KY RY KR S IPAH+ E GD V I + RPLSKT
Sbjct: 62 KYDRYMKRRSRIPAHVPGVLDSLEVGDEVKIAETRPLSKT 101
>gi|332796537|ref|YP_004458037.1| 30S ribosomal protein S17 [Acidianus hospitalis W1]
gi|332694272|gb|AEE93739.1| ribosomal protein S17 [Acidianus hospitalis W1]
Length = 111
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 5/106 (4%)
Query: 22 KSIGL-GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
K++G+ G K P +A DK CPF G + +RG I G + N+T + R YL++
Sbjct: 5 KNVGIVGVKAPEKACN----DKNCPFHGNLRVRGMIFEGKLIKFRANKTGVFERVYLYYN 60
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVL 126
KY+RYE+R S I HI PC VKEGD+VIIG+CRP++K+V F VL
Sbjct: 61 SKYKRYERRRSRIRVHIPPCLDVKEGDNVIIGECRPIAKSVSFVVL 106
>gi|448730386|ref|ZP_21712694.1| 30S ribosomal protein S17P [Halococcus saccharolyticus DSM 5350]
gi|445793554|gb|EMA44126.1| 30S ribosomal protein S17P [Halococcus saccharolyticus DSM 5350]
Length = 137
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
++GL P E T D CPF GTVS+RG + G S +M+RT+IV R Y V K
Sbjct: 2 ALGLNVDEP----ETTCDDPNCPFHGTVSVRGGTVDGMVASTEMHRTVIVEREYDVTVPK 57
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKT 120
Y R KR S PAH C + GD V I + RPLSKT
Sbjct: 58 YDRKMKRRSRTPAHAPDCLDLSVGDAVRIAETRPLSKT 95
>gi|385805555|ref|YP_005841953.1| 30S ribosomal protein S17 [Fervidicoccus fontis Kam940]
gi|383795418|gb|AFH42501.1| 30S ribosomal protein S17P [Fervidicoccus fontis Kam940]
Length = 116
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 62/86 (72%)
Query: 41 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 100
D CPF GT+ +RG ++ G S KM+ T++V +YL++ KKY+RYEKR S I AH+SPC
Sbjct: 24 DPNCPFHGTIKVRGMLITGKVVSDKMDGTVVVVHDYLYYDKKYKRYEKRKSKIHAHVSPC 83
Query: 101 FRVKEGDHVIIGQCRPLSKTVRFNVL 126
VK GD VIIG+ RP+SKTV F VL
Sbjct: 84 LDVKIGDTVIIGETRPISKTVSFVVL 109
>gi|448726785|ref|ZP_21709177.1| 30S ribosomal protein S17P [Halococcus morrhuae DSM 1307]
gi|445793831|gb|EMA44402.1| 30S ribosomal protein S17P [Halococcus morrhuae DSM 1307]
Length = 139
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
++GL P E T D CPF GT+S+RG + G S +M+R+++V R Y V K
Sbjct: 2 ALGLNVTEP----ETTCDDPNCPFHGTLSVRGGTVDGMVASTEMDRSVVVEREYDVAVPK 57
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGA 137
Y R KR S PAH C ++ GD V I + RPLSKT V+ + GA
Sbjct: 58 YDRQMKRRSRTPAHAPDCLDLEVGDAVRIAETRPLSKTKAHVVVSTLDTTRDLGA 112
>gi|448737871|ref|ZP_21719904.1| 30S ribosomal protein S17P [Halococcus thailandensis JCM 13552]
gi|445802833|gb|EMA53134.1| 30S ribosomal protein S17P [Halococcus thailandensis JCM 13552]
Length = 139
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
++GL P E T D CPF GT+S+RG + G S +M+R+++V R Y V K
Sbjct: 2 ALGLNVTEP----ETTCDDPNCPFHGTLSVRGGTVDGMVASTEMDRSVVVEREYDVAVPK 57
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGA 137
Y R KR S PAH C ++ GD V I + RPLSKT V+ + GA
Sbjct: 58 YDRQMKRRSRTPAHAPDCLDLEVGDAVRIAETRPLSKTKAHVVVSTLDTTRDLGA 112
>gi|11499500|ref|NP_070741.1| 30S ribosomal protein S17P [Archaeoglobus fulgidus DSM 4304]
gi|6226078|sp|O28363.1|RS17_ARCFU RecName: Full=30S ribosomal protein S17P
gi|2648627|gb|AAB89337.1| SSU ribosomal protein S17P (rps17P) [Archaeoglobus fulgidus DSM
4304]
Length = 111
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 64/109 (58%), Gaps = 5/109 (4%)
Query: 21 WKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
+ IG+ K P E D+ CPF GT+S+RG++L G +T ++ R + +V
Sbjct: 1 MRDIGIDVKPPERECE----DENCPFHGTLSVRGQLLRGKVVKV-YGKTAVIERELIRYV 55
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
K++RY K+ S + AH C R + GD V IG+CRP+SKT F +L+V+
Sbjct: 56 PKFERYMKKRSKLHAHNPRCIRARPGDIVTIGECRPISKTKSFVILEVV 104
>gi|448338125|ref|ZP_21527177.1| 30S ribosomal protein S17P [Natrinema pallidum DSM 3751]
gi|445623300|gb|ELY76722.1| 30S ribosomal protein S17P [Natrinema pallidum DSM 3751]
Length = 145
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 23 SIGLGFKTPREAIEGTYID-KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+IGL TP E D +KCPF G +S+RG+IL GT S M++T++V R Y V
Sbjct: 2 AIGLDVDTPPEPENPEEYDYEKCPFYGELSVRGQILEGTVVSTDMDKTVVVEREYDVAVP 61
Query: 82 KYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 128
KY R+ KR S IPAH+ + GD V I + RPLSKT V++V
Sbjct: 62 KYDRHMKRRSRIPAHVPGVLEPLSVGDTVKIAETRPLSKTKSHVVVEV 109
>gi|433590203|ref|YP_007279699.1| archaeal ribosomal protein S17P [Natrinema pellirubrum DSM 15624]
gi|448332391|ref|ZP_21521635.1| 30S ribosomal protein S17P [Natrinema pellirubrum DSM 15624]
gi|448386098|ref|ZP_21564306.1| 30S ribosomal protein S17P [Haloterrigena thermotolerans DSM 11522]
gi|433304983|gb|AGB30795.1| archaeal ribosomal protein S17P [Natrinema pellirubrum DSM 15624]
gi|445627495|gb|ELY80819.1| 30S ribosomal protein S17P [Natrinema pellirubrum DSM 15624]
gi|445655996|gb|ELZ08838.1| 30S ribosomal protein S17P [Haloterrigena thermotolerans DSM 11522]
Length = 144
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 23 SIGLGFKTPREAIEGTYID-KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+IGL TP E D +KCPF G +S+RG+IL GT S M++T++V R Y V
Sbjct: 2 AIGLDVDTPPEPENPEEYDYEKCPFYGELSVRGQILEGTVVSTDMDKTVVVEREYDVAVP 61
Query: 82 KYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 128
KY R+ KR S IPAH+ + GD V I + RPLSKT V++V
Sbjct: 62 KYDRHMKRRSRIPAHVPGVLEPLSVGDTVKIAETRPLSKTKSHVVVEV 109
>gi|407464755|ref|YP_006775637.1| 30S ribosomal protein S17 [Candidatus Nitrosopumilus sp. AR2]
gi|407047943|gb|AFS82695.1| 30S ribosomal protein S17 [Candidatus Nitrosopumilus sp. AR2]
Length = 107
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
++IGL K P E DK CPF G +S+RG++ G +K +TI ++++ +
Sbjct: 3 QNIGLKVKEPTRECE----DKHCPFHGGLSVRGKLFDGKVTGSKARQTITLQKDAPLYFS 58
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
K++RY + S I AH+ C V+ GDHV+ +CRP+SK+V + V++V
Sbjct: 59 KFKRYARGTSTIHAHVPSCIDVETGDHVLTAECRPISKSVSYVVVEV 105
>gi|170290798|ref|YP_001737614.1| 30S ribosomal protein S17 [Candidatus Korarchaeum cryptofilum OPF8]
gi|170174878|gb|ACB07931.1| ribosomal protein S17 [Candidatus Korarchaeum cryptofilum OPF8]
Length = 110
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 53/86 (61%)
Query: 41 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 100
D KCP+ G +S+R L G S KM TI V YLH+ KKY+RYE+R S I AH+ PC
Sbjct: 21 DDKCPWHGNISLRRSSLDGRVISTKMTGTITVLVEYLHYDKKYKRYERRRSKIHAHLPPC 80
Query: 101 FRVKEGDHVIIGQCRPLSKTVRFNVL 126
V EGD V I + R L+KTV VL
Sbjct: 81 IEVSEGDLVRIVETRRLAKTVSHVVL 106
>gi|448735126|ref|ZP_21717343.1| 30S ribosomal protein S17P [Halococcus salifodinae DSM 8989]
gi|445798739|gb|EMA49130.1| 30S ribosomal protein S17P [Halococcus salifodinae DSM 8989]
Length = 141
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
++GL P E T D CPF GTVS+RG + G S +M+R++IV R Y V K
Sbjct: 2 ALGLNVDEP----ETTCDDPNCPFHGTVSVRGGTVDGMVASTEMHRSVIVEREYDVTVPK 57
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKT 120
Y R KR S PAH C + GD V I + RPLSKT
Sbjct: 58 YDRKMKRRSRTPAHAPDCLDLSVGDAVRIAETRPLSKT 95
>gi|409096174|ref|ZP_11216198.1| 30S ribosomal protein S17P [Thermococcus zilligii AN1]
Length = 114
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IGL + P E + D CP+ G + I GR G S K +T++V R + ++K
Sbjct: 2 REIGLNVQPPAEKCD----DPNCPWHGHLKIHGRYFEGIVVSDKGKKTVVVERQHYRYLK 57
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGG 136
KY+RYE R S + AH C K GD V+I + RP+SKT F V+ V+ G
Sbjct: 58 KYERYELRRSKVHAHNPECINAKMGDRVLIAETRPISKTKSFVVVAVVQRAERAG 112
>gi|77024948|gb|ABA61375.1| ribosomal protein S17 [uncultured marine group II euryarchaeote
HF70_59C08]
Length = 111
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 41 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 100
D+ CPF G++ +RG+I+ GT M ++IIV R ++ +++K++RYEKR AH+ C
Sbjct: 19 DENCPFYGSLRLRGQIIEGTIAKVGMQKSIIVEREHIRYMQKFERYEKRTRRYAAHLPSC 78
Query: 101 F-RVKEGDHVIIGQCRPLSKTVRFNVLK 127
V GD V I +CRPLSKT+ F V++
Sbjct: 79 IGDVNVGDSVRIMECRPLSKTITFCVIE 106
>gi|118576060|ref|YP_875803.1| 30S ribosomal protein S17 [Cenarchaeum symbiosum A]
gi|118194581|gb|ABK77499.1| ribosomal protein S17 [Cenarchaeum symbiosum A]
Length = 109
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 65/108 (60%), Gaps = 4/108 (3%)
Query: 22 KSIGLGFKTP-REAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
+ IGL P REA +G DK PF GT+ IRG++ GT SAK T+++ + +
Sbjct: 3 REIGLPVPAPSREAADG---DKNNPFNGTLPIRGKLFEGTIVSAKARSTVVIEKESPVYF 59
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
K++RY + S I AH+ V+EGD V+ +CRP++K+V F V++V
Sbjct: 60 TKFKRYARGRSRIHAHVPSNIDVREGDRVLAAECRPVAKSVSFVVVEV 107
>gi|315427717|dbj|BAJ49313.1| small subunit ribosomal protein S17 [Candidatus Caldiarchaeum
subterraneum]
Length = 79
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 53/76 (69%)
Query: 52 IRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVII 111
+RG +L+G + KMN+T++V ++ +VKKY+RY +R S I AH+ PC GD V +
Sbjct: 1 MRGILLSGVVYKKKMNKTVVVENEHIVYVKKYKRYMRRRSRISAHLPPCIDADVGDRVRL 60
Query: 112 GQCRPLSKTVRFNVLK 127
G+CRPLSKTV F VL+
Sbjct: 61 GECRPLSKTVSFVVLE 76
>gi|336252431|ref|YP_004595538.1| 30S ribosomal protein S17P [Halopiger xanaduensis SH-6]
gi|335336420|gb|AEH35659.1| ribosomal protein S17P [Halopiger xanaduensis SH-6]
Length = 144
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 39 YIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHIS 98
Y +KCPF G +S+RG++L GT S M +T++V R Y V KY RY KR S IPAH+
Sbjct: 19 YDYEKCPFYGELSVRGQVLEGTVVSTDMEKTVVVEREYDVAVPKYNRYMKRRSRIPAHVP 78
Query: 99 PCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 128
+ GD V I + RPLSKT V++V
Sbjct: 79 GVLEPLSVGDTVKIAETRPLSKTKSHVVVEV 109
>gi|284165501|ref|YP_003403780.1| 30S ribosomal protein S17P [Haloterrigena turkmenica DSM 5511]
gi|284015156|gb|ADB61107.1| ribosomal protein S17P [Haloterrigena turkmenica DSM 5511]
Length = 144
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
+KCPF G + +RG+IL GT S M++T++V R Y V KY RY KR S IPAH+
Sbjct: 22 EKCPFYGDLPVRGQILEGTVVSTDMDKTVVVEREYDVAVPKYDRYMKRRSRIPAHVPGVL 81
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKV 128
+ GD V I + RPLSKT V++V
Sbjct: 82 EPLSVGDTVKIAETRPLSKTKSHVVVEV 109
>gi|161528309|ref|YP_001582135.1| 30S ribosomal protein S17 [Nitrosopumilus maritimus SCM1]
gi|226697997|sp|A9A5I6.1|RS17_NITMS RecName: Full=30S ribosomal protein S17P
gi|160339610|gb|ABX12697.1| ribosomal protein S17 [Nitrosopumilus maritimus SCM1]
Length = 107
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 67/107 (62%), Gaps = 4/107 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
++IGL K P+ E DK CPF G ++IRG++ G +K +TI ++++ +
Sbjct: 3 RNIGLKVKEPKRECE----DKNCPFHGELAIRGKLFDGKVTGSKAKQTITLQKDAPVYFN 58
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
K++RY + S+I AH+ C V+ GD+V+ +CRP+SK+V + V++V
Sbjct: 59 KFKRYARGKSSIHAHVPGCIDVESGDNVLTAECRPISKSVSYVVVEV 105
>gi|397773834|ref|YP_006541380.1| ribosomal protein S17P [Natrinema sp. J7-2]
gi|448341381|ref|ZP_21530342.1| 30S ribosomal protein S17P [Natrinema gari JCM 14663]
gi|448345594|ref|ZP_21534483.1| 30S ribosomal protein S17P [Natrinema altunense JCM 12890]
gi|397682927|gb|AFO57304.1| ribosomal protein S17P [Natrinema sp. J7-2]
gi|445628063|gb|ELY81374.1| 30S ribosomal protein S17P [Natrinema gari JCM 14663]
gi|445633527|gb|ELY86714.1| 30S ribosomal protein S17P [Natrinema altunense JCM 12890]
Length = 145
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
+KCPF G +S+RG+IL GT S M++T++V R Y V KY R+ KR S IPAH+
Sbjct: 22 EKCPFYGELSVRGQILEGTVVSTDMDKTVVVEREYDVAVPKYDRHMKRRSRIPAHVPGVL 81
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKV 128
+ GD V I + RPLSKT V++V
Sbjct: 82 EPLSVGDTVKIAETRPLSKTKSHVVVEV 109
>gi|383625036|ref|ZP_09949442.1| 30S ribosomal protein S17P [Halobiforma lacisalsi AJ5]
gi|448697492|ref|ZP_21698532.1| 30S ribosomal protein S17P [Halobiforma lacisalsi AJ5]
gi|445781445|gb|EMA32301.1| 30S ribosomal protein S17P [Halobiforma lacisalsi AJ5]
Length = 144
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
+KCPF G +S+RG+IL G S M++T++V R Y V KY RY KR S IPAH+
Sbjct: 22 EKCPFYGELSVRGQILEGQVVSTDMDKTVVVEREYDVAVPKYDRYMKRRSRIPAHVPGVL 81
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKV 128
+ GD V I + RPLSKT V++V
Sbjct: 82 EPLSVGDTVKIAETRPLSKTKSHVVVEV 109
>gi|448329368|ref|ZP_21518668.1| 30S ribosomal protein S17P [Natrinema versiforme JCM 10478]
gi|445614107|gb|ELY67788.1| 30S ribosomal protein S17P [Natrinema versiforme JCM 10478]
Length = 144
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
+KCPF G +S+RG+IL GT S M++T++V R Y V KY R+ KR S IPAH+
Sbjct: 22 EKCPFYGELSVRGQILEGTVVSTDMDKTVVVEREYDVAVPKYDRHMKRRSRIPAHVPGVL 81
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKV 128
+ GD V I + RPLSKT V++V
Sbjct: 82 EPLSVGDTVKIAETRPLSKTKSHVVVEV 109
>gi|448311971|ref|ZP_21501724.1| 30S ribosomal protein S17P [Natronolimnobius innermongolicus JCM
12255]
gi|445603592|gb|ELY57554.1| 30S ribosomal protein S17P [Natronolimnobius innermongolicus JCM
12255]
Length = 151
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 39 YIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHIS 98
Y +KCPF G + +RG+IL GT S M++T++V R Y V KY RY KR S IPAH+
Sbjct: 19 YDYEKCPFYGELPVRGQILEGTVVSTDMDKTVVVEREYDVAVPKYDRYMKRRSRIPAHVP 78
Query: 99 PCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 128
+ GD V I + RPLSKT V++V
Sbjct: 79 GVLEPLSVGDSVKIAETRPLSKTKSHVVVEV 109
>gi|429217544|ref|YP_007175534.1| 30S ribosomal protein S17 [Caldisphaera lagunensis DSM 15908]
gi|429134073|gb|AFZ71085.1| archaeal ribosomal protein S17P [Caldisphaera lagunensis DSM 15908]
Length = 117
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 55/86 (63%)
Query: 41 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 100
D CP+ G++ +RG +L G + + +VR YL++ +KY+RYE R + H+ C
Sbjct: 29 DPNCPWHGSLRVRGVLLEGIVEKFRAKGSAVVRHEYLYYERKYKRYEWRKTKKLVHVPEC 88
Query: 101 FRVKEGDHVIIGQCRPLSKTVRFNVL 126
+KEGD V+IG+ +PLSKT++F +L
Sbjct: 89 LDIKEGDKVVIGETKPLSKTIKFVIL 114
>gi|223478005|ref|YP_002582379.1| 30S ribosomal protein S11 [Thermococcus sp. AM4]
gi|214033231|gb|EEB74059.1| SSU ribosomal protein S11e (S17p) [Thermococcus sp. AM4]
Length = 114
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IGL + P E D KCP+ G + I GR G S K +T++V R + ++K
Sbjct: 2 REIGLRVQPPAEVCN----DPKCPWHGNLKIHGRYFEGIVVSDKGKKTVVVERRHYKYLK 57
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+RYE R S + AH C K GD V+I + RP+SKT F V+ V+
Sbjct: 58 KYERYELRRSKVHAHNPECINAKTGDKVLIAETRPISKTKSFVVVAVL 105
>gi|159041099|ref|YP_001540351.1| 30S ribosomal protein S17 [Caldivirga maquilingensis IC-167]
gi|157919934|gb|ABW01361.1| ribosomal protein S17 [Caldivirga maquilingensis IC-167]
Length = 152
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IG+ + P +A+ D KCP+ G V +RG IL G S M + ++++ +LH+
Sbjct: 32 RHIGVPWLLPPKAVCN---DDKCPWHGHVKVRGTILEGRVVSVYMGQ-VVIQHEWLHYSP 87
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVL 126
KY+RY ++ NI AH+ C +V GD+V+IG+ RPL+K + F VL
Sbjct: 88 KYKRYIRKRRNIHAHLPSCIKVNVGDYVVIGETRPLAKFISFVVL 132
>gi|448392352|ref|ZP_21567126.1| 30S ribosomal protein S17P [Haloterrigena salina JCM 13891]
gi|445664442|gb|ELZ17151.1| 30S ribosomal protein S17P [Haloterrigena salina JCM 13891]
Length = 144
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
+KCPF G + +RG+IL GT S M++T++V R Y V KY RY KR S IPAH+
Sbjct: 22 EKCPFYGELPVRGQILEGTVVSTDMDKTVVVEREYDVAVPKYDRYMKRRSRIPAHVPGVL 81
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKV 128
+ GD V I + RPLSKT V+++
Sbjct: 82 EPLSVGDTVKIAETRPLSKTKSHVVVEI 109
>gi|240104050|ref|YP_002960359.1| 30S ribosomal protein S17P [Thermococcus gammatolerans EJ3]
gi|239911604|gb|ACS34495.1| SSU ribosomal protein S17P (rps17P) [Thermococcus gammatolerans
EJ3]
Length = 114
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IGL + P E D KCP+ G + I GR G S K +T++V R + ++K
Sbjct: 2 REIGLRVQPPAEVCN----DPKCPWHGNLKIHGRYFEGIVVSDKGKKTVVVERRHYKYLK 57
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+RYE R S + AH C K GD V+I + RP+SKT F V+ V+
Sbjct: 58 KYERYELRRSKVHAHNPECINAKTGDKVLIAETRPISKTKSFVVVAVL 105
>gi|386876335|ref|ZP_10118455.1| ribosomal protein S17P [Candidatus Nitrosopumilus salaria BD31]
gi|386805853|gb|EIJ65352.1| ribosomal protein S17P [Candidatus Nitrosopumilus salaria BD31]
Length = 107
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 6/108 (5%)
Query: 22 KSIGLGFKTP-REAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
K IGL K P RE DK CPF G +SIRG++ G K +TI + ++ +
Sbjct: 3 KDIGLKVKEPTRECT-----DKHCPFHGGLSIRGKLFDGKVTGNKAKQTITLEKDSPIYF 57
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
K++RY + S I AH+ C V+ GDHV+ +CRP+SK+V + V++V
Sbjct: 58 SKFKRYARGTSTIHAHVPSCIDVESGDHVLTAECRPISKSVSYVVVEV 105
>gi|435848739|ref|YP_007310989.1| archaeal ribosomal protein S17P [Natronococcus occultus SP4]
gi|433675007|gb|AGB39199.1| archaeal ribosomal protein S17P [Natronococcus occultus SP4]
Length = 149
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
+KCPF G +S+RG+IL GT S M++T++V R Y V KY R+ KR S IPAH+
Sbjct: 22 EKCPFYGELSVRGQILEGTVISTDMDKTVVVEREYDVAVPKYDRHMKRRSRIPAHVPGVL 81
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKV 128
+ GD V I + RPLSKT V++V
Sbjct: 82 EPLSVGDTVKIAETRPLSKTKSHVVVEV 109
>gi|170516822|gb|ACB15224.1| ribosomal protein S11/S17 [uncultured marine group II euryarchaeote
DeepAnt-15E7]
Length = 110
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 4/107 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IG+ +TP +G + CPF G++ +RG+I+ ++ M +I+V R ++K
Sbjct: 2 RDIGVDVRTPEGEWDG---NDNCPFYGSLRVRGQIIECIVSTSGMTDSIVVERETSRYMK 58
Query: 82 KYQRYEKRHSNIPAHISPCF-RVKEGDHVIIGQCRPLSKTVRFNVLK 127
KY+RYEKR AH+ C V GD V I +CRPLSKTV F V++
Sbjct: 59 KYERYEKRTRRYAAHLPTCIGGVSRGDKVRIMECRPLSKTVNFCVIE 105
>gi|341582053|ref|YP_004762545.1| 30S ribosomal protein S17P [Thermococcus sp. 4557]
gi|340809711|gb|AEK72868.1| 30S ribosomal protein S17P [Thermococcus sp. 4557]
Length = 111
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IGL + P E + D CP+ G + I GR G S K +T++V R + H++K
Sbjct: 2 REIGLKVQPPAEKCD----DPHCPWHGHLRIHGRYFEGVVVSDKGKKTVVVERQHYHYLK 57
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
KY+RYE R S + AH C K GD V+I + RP+SKT + V+ V
Sbjct: 58 KYERYELRRSKVHAHNPECIDAKVGDRVLIAETRPISKTKSWVVVAV 104
>gi|448362295|ref|ZP_21550906.1| 30S ribosomal protein S17P [Natrialba asiatica DSM 12278]
gi|445648816|gb|ELZ01764.1| 30S ribosomal protein S17P [Natrialba asiatica DSM 12278]
Length = 149
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
+KCPF G +S+RG+IL GT S M++T++V R Y V KY R KR S IPAH+
Sbjct: 22 EKCPFYGELSVRGQILEGTVVSTDMDKTVVVEREYDVAVPKYDRSMKRRSRIPAHVPGVL 81
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGG 136
+ GD V I + RPLSKT V++V ++
Sbjct: 82 EPLSVGDTVKIAETRPLSKTKSHVVVEVTEEATAAD 117
>gi|448323154|ref|ZP_21512618.1| 30S ribosomal protein S17P [Natronococcus amylolyticus DSM 10524]
gi|445600340|gb|ELY54353.1| 30S ribosomal protein S17P [Natronococcus amylolyticus DSM 10524]
Length = 149
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
+KCPF G +S+RG+IL GT S M++T++V R Y V KY R KR S IPAH+
Sbjct: 22 EKCPFYGELSVRGQILEGTVISTDMDKTVVVEREYDVAVPKYDRQMKRRSRIPAHVPGVL 81
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS 134
+ GD V I + RPLSKT V++V ++
Sbjct: 82 EPLSVGDTVKIAETRPLSKTKSHVVVEVTEEATA 115
>gi|409731015|ref|ZP_11272565.1| 30S ribosomal protein S17P [Halococcus hamelinensis 100A6]
gi|448724773|ref|ZP_21707278.1| 30S ribosomal protein S17P [Halococcus hamelinensis 100A6]
gi|445784982|gb|EMA35778.1| 30S ribosomal protein S17P [Halococcus hamelinensis 100A6]
Length = 143
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
++GL P E T D CPF GT+S+RG + G S M+R+ +V R Y V K
Sbjct: 2 ALGLNVDEP----EATCDDPNCPFHGTLSVRGGTVDGVVVSTDMDRSAVVEREYDVAVPK 57
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKT 120
Y R KR S PAH C ++ G+ V I + RPLSKT
Sbjct: 58 YDRAMKRRSRTPAHAPECLEIEVGEPVRIAETRPLSKT 95
>gi|448369930|ref|ZP_21556383.1| 30S ribosomal protein S17P [Natrialba aegyptia DSM 13077]
gi|445650370|gb|ELZ03294.1| 30S ribosomal protein S17P [Natrialba aegyptia DSM 13077]
Length = 149
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 39 YIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHIS 98
Y +KCPF G +S+RG+IL GT S M++T++V R Y V KY R KR S IPAH+
Sbjct: 19 YDYEKCPFYGELSVRGQILEGTVVSTDMDKTVVVEREYDVAVPKYDRSMKRRSRIPAHVP 78
Query: 99 PCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSG 135
+ GD V I + RPLSKT V++V ++
Sbjct: 79 GVLEPLSVGDTVKIAETRPLSKTKSHVVVEVTEEATAA 116
>gi|448350190|ref|ZP_21539009.1| 30S ribosomal protein S17P [Natrialba taiwanensis DSM 12281]
gi|445637697|gb|ELY90845.1| 30S ribosomal protein S17P [Natrialba taiwanensis DSM 12281]
Length = 149
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 39 YIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHIS 98
Y +KCPF G +S+RG+IL GT S M++T++V R Y V KY R KR S IPAH+
Sbjct: 19 YDYEKCPFYGELSVRGQILEGTVVSTDMDKTVVVEREYDVAVPKYDRSMKRRSRIPAHVP 78
Query: 99 PCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 128
+ GD V I + RPLSKT V++V
Sbjct: 79 GVLEPLSVGDTVKIAETRPLSKTKSHVVVEV 109
>gi|448315121|ref|ZP_21504774.1| 30S ribosomal protein S17P [Natronococcus jeotgali DSM 18795]
gi|445612380|gb|ELY66106.1| 30S ribosomal protein S17P [Natronococcus jeotgali DSM 18795]
Length = 149
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
+KCPF G +S+RG+IL GT S M++T++V R Y V KY R KR S IPAH+
Sbjct: 22 EKCPFYGELSVRGQILEGTVISTDMDKTVVVEREYDVAVPKYDRQMKRRSRIPAHVPGVL 81
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKV 128
+ GD V I + RPLSKT V++V
Sbjct: 82 EPLSVGDTVKIAETRPLSKTKSHVVVEV 109
>gi|12833368|dbj|BAB22499.1| unnamed protein product [Mus musculus]
Length = 64
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 48/64 (75%), Gaps = 4/64 (6%)
Query: 79 FVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGA 137
+++KY R+EKRH N+ H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV A G
Sbjct: 1 YIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKA---AGT 57
Query: 138 KKAF 141
KK F
Sbjct: 58 KKQF 61
>gi|429190335|ref|YP_007176013.1| 30S ribosomal protein S17 [Natronobacterium gregoryi SP2]
gi|448326247|ref|ZP_21515614.1| 30S ribosomal protein S17P [Natronobacterium gregoryi SP2]
gi|429134553|gb|AFZ71564.1| archaeal ribosomal protein S17P [Natronobacterium gregoryi SP2]
gi|445612904|gb|ELY66621.1| 30S ribosomal protein S17P [Natronobacterium gregoryi SP2]
Length = 146
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 39 YIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHIS 98
Y + CPF G + +RG+IL GT S M++T++V R Y V KY RY KR S IPAH+
Sbjct: 19 YDYETCPFYGELPVRGQILEGTVVSTDMDKTVVVEREYDVAVPKYDRYMKRRSRIPAHVP 78
Query: 99 PCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 128
+ GD V I + RPLSKT V++V
Sbjct: 79 GVLEPLSVGDSVKIAETRPLSKTKSHVVVEV 109
>gi|390960785|ref|YP_006424619.1| 30S ribosomal protein S17 [Thermococcus sp. CL1]
gi|390519093|gb|AFL94825.1| 30S ribosomal protein S17P [Thermococcus sp. CL1]
Length = 111
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IGL + P E + D CP+ G + I GR G S K +T++V R + H++K
Sbjct: 2 REIGLKVQPPAEKCD----DPHCPWHGHLKIHGRYFEGIVVSDKGKKTVVVERQHYHYLK 57
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
KY+RYE R S + AH C + GD V+I + RP+SKT + V+ V
Sbjct: 58 KYERYELRRSKVHAHNPECINARVGDRVLIAETRPISKTKSWVVVAV 104
>gi|452206439|ref|YP_007486561.1| 30S ribosomal protein S17 [Natronomonas moolapensis 8.8.11]
gi|452082539|emb|CCQ35797.1| 30S ribosomal protein S17 [Natronomonas moolapensis 8.8.11]
Length = 114
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 23 SIGLGFKTPREAIEGTYID-KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+IGL P E D + CPF G + +RG+++ GT S M+RT++V R Y V
Sbjct: 2 AIGLDVTQPPEPDNPEEYDYETCPFYGELPVRGQVIEGTVVSTDMDRTVVVEREYEVNVP 61
Query: 82 KYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGS 133
KY R KR S IPAH+ + GD V I + RPLSKT V++V A +
Sbjct: 62 KYDRQMKRRSKIPAHVPGVLEPLAVGDDVKIAETRPLSKTKSHVVVEVTEADA 114
>gi|448399319|ref|ZP_21570621.1| 30S ribosomal protein S17P [Haloterrigena limicola JCM 13563]
gi|445669226|gb|ELZ21839.1| 30S ribosomal protein S17P [Haloterrigena limicola JCM 13563]
Length = 145
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
+KCPF G +++RG++L GT S M++T++V R Y V KY R KR S IPAH+
Sbjct: 22 EKCPFYGDLAVRGQVLEGTVVSTDMDKTVVVEREYDVAVPKYDRQMKRRSRIPAHVPGVL 81
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKV 128
+ GD V I + RPLSKT V++V
Sbjct: 82 EPLSVGDTVKIAETRPLSKTKSHVVVEV 109
>gi|330835816|ref|YP_004410544.1| 30S ribosomal protein S17P [Metallosphaera cuprina Ar-4]
gi|329567955|gb|AEB96060.1| 30S ribosomal protein S17P [Metallosphaera cuprina Ar-4]
Length = 111
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 54/86 (62%)
Query: 41 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 100
D+ CP+ G++ +RG I+ G + + +V R YL + KY+RYE+R S I A + C
Sbjct: 23 DRDCPYHGSLKVRGIIIEGILIKNRAQKMGVVERTYLFYDHKYKRYERRSSRIHAKVPSC 82
Query: 101 FRVKEGDHVIIGQCRPLSKTVRFNVL 126
VKEGD V+I + RP++K+V F VL
Sbjct: 83 LEVKEGDKVVIAETRPIAKSVSFVVL 108
>gi|20090872|ref|NP_616947.1| 30S ribosomal protein S17 [Methanosarcina acetivorans C2A]
gi|74531659|sp|Q8TP90.1|RS17L_METAC RecName: Full=Putative 30S ribosomal protein S17P-like
gi|19915946|gb|AAM05427.1| hypothetical protein (multi-domain) [Methanosarcina acetivorans
C2A]
Length = 486
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 5/107 (4%)
Query: 22 KSIGL-GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
+ IG+ G K P E D +CPF G +S+RG+IL G S KM + I+++R +
Sbjct: 2 RDIGINGIKLPTEDCN----DPECPFHGKLSVRGQILKGIVISDKMTKNIVMKRYREKWS 57
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
KYQR ++ S I A+ PC K GD + I +CRPL+K F V++
Sbjct: 58 YKYQRKQRVSSKIHAYSPPCMEAKIGDIITIAECRPLNKGSSFVVIE 104
>gi|329765060|ref|ZP_08256644.1| ribosomal protein S17 [Candidatus Nitrosoarchaeum limnia SFB1]
gi|393796601|ref|ZP_10379965.1| 30S ribosomal protein S17 [Candidatus Nitrosoarchaeum limnia BG20]
gi|329138437|gb|EGG42689.1| ribosomal protein S17 [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 107
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 62/106 (58%), Gaps = 4/106 (3%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
+IGL K P E D CPF G +S+RG++ G S K +TI +++ + K
Sbjct: 4 NIGLKVKAP----ERECTDTHCPFHGKLSVRGKLFDGKVTSNKAKQTITLQKESPIYYMK 59
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
++RY + + I AH+ C V+ GDHV+ +CRP+SK+V + V++V
Sbjct: 60 FKRYARSKNTIHAHVPECIDVETGDHVLTAECRPISKSVSYVVVEV 105
>gi|193083856|gb|ACF09537.1| ribosomal protein S11/S17 [uncultured marine group II euryarchaeote
KM3-85-F5]
Length = 110
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IG+ P +G ++ CPF G + +RG+I+ G S M ++V R +++
Sbjct: 2 RDIGVDVHAPDGEWDG---NENCPFYGKLRLRGQIIKGVVSSKGMQDAVVVERETTRYMQ 58
Query: 82 KYQRYEKRHSNIPAHISPCF-RVKEGDHVIIGQCRPLSKTVRFNVLK 127
K++RYEKR AH+ C V GD V I +CRPLSKTV+F V++
Sbjct: 59 KFERYEKRTRRYSAHLPSCIGEVSTGDSVRIMECRPLSKTVKFCVIE 105
>gi|407462395|ref|YP_006773712.1| 30S ribosomal protein S17 [Candidatus Nitrosopumilus koreensis AR1]
gi|407046017|gb|AFS80770.1| 30S ribosomal protein S17 [Candidatus Nitrosopumilus koreensis AR1]
Length = 107
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
++IGL K P+ DK CPF G ++IRG++ G +K +TI ++++ +
Sbjct: 3 RNIGLNVKEPKREC----TDKHCPFHGELAIRGKLFDGKVTGSKARQTITLQKDTPIYFN 58
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
K++RY + S+I AH+ C V+ GD V+ +CRP+SK+V + V++V
Sbjct: 59 KFKRYARGKSSIHAHVPGCIDVESGDSVLTAECRPISKSVSYVVVEV 105
>gi|354498596|ref|XP_003511401.1| PREDICTED: hypothetical protein LOC100769610 [Cricetulus griseus]
Length = 276
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 64/120 (53%), Gaps = 21/120 (17%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+SI GF+ P+E+ TYI IL+G KM T+I+ ++YLH+++
Sbjct: 175 QSICRGFQMPKES---TYI---------------ILSGVMSKMKMQTTVIISQDYLHYIQ 216
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
Y ++K H + H+SP D VI+G C PLSKTV FNVLKV A G KK F
Sbjct: 217 NYDGFQKHHKIVSMHLSPFQGCTHRDIVIVGDCWPLSKTVHFNVLKVTQA---AGTKKQF 273
>gi|167043042|gb|ABZ07754.1| putative ribosomal protein S17 [uncultured marine microorganism
HF4000_ANIW141A21]
Length = 75
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%)
Query: 63 SAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 122
S K ++ ++V++ YLH++K+ RYEKR + AH+S C VKE D +IIG+CRPLSK++
Sbjct: 7 SVKASKMVVVKKEYLHYIKRVMRYEKRTMKLHAHLSDCIDVKEDDTLIIGECRPLSKSIS 66
Query: 123 FNVLK 127
F VL+
Sbjct: 67 FVVLE 71
>gi|257076569|ref|ZP_05570930.1| 30S ribosomal protein S17P [Ferroplasma acidarmanus fer1]
Length = 106
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 21 WKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
+IG+ K P + D CPF G + + G+IL G S KM R++++RR +V
Sbjct: 1 MNNIGIDVKPPEKECN----DINCPFHGELPVHGQILEGKVVSVKMKRSVVIRREAKVYV 56
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
KKY+RY + + AH+ C VK GD V +CR L+KT+ F V++
Sbjct: 57 KKYERYITKFTKYHAHLPDCIDVKVGDSVKAAECRKLAKTIDFVVIE 103
>gi|379004527|ref|YP_005260199.1| 30S ribosomal protein S17P [Pyrobaculum oguniense TE7]
gi|375159980|gb|AFA39592.1| archaeal ribosomal protein S17P [Pyrobaculum oguniense TE7]
Length = 146
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IG+ + P A+ D CP+ G + +R ++L A+M + +V +LH+++
Sbjct: 27 RDIGIPWVLPPAAVCD---DPLCPWHGHLKVRLKLLEVAVEKARMRKAAVVVHEWLHYIR 83
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVL 126
KY RYE+R + + C VK GD VII + RPLSKT+ + V+
Sbjct: 84 KYNRYERRRRKLHVRVPECIEVKPGDKVIIAETRPLSKTISWVVI 128
>gi|340344783|ref|ZP_08667915.1| 30S ribosomal protein S17P [Candidatus Nitrosoarchaeum koreensis
MY1]
gi|339519924|gb|EGP93647.1| 30S ribosomal protein S17P [Candidatus Nitrosoarchaeum koreensis
MY1]
Length = 107
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 6/107 (5%)
Query: 23 SIGLGFKTP-REAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+IGL K P RE D CPF G +S+RG++ G S K +TI +++ +
Sbjct: 4 NIGLKVKAPSRECT-----DAHCPFHGKLSVRGKLFDGKVTSNKAKQTITLQKESPIYYL 58
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
K++RY + + I AH+ C V+ GDHV+ +CRP+SK+V + V++V
Sbjct: 59 KFKRYARSKNTIHAHVPECIDVQTGDHVLTAECRPISKSVSYVVVEV 105
>gi|448704125|ref|ZP_21700606.1| 30S ribosomal protein S17P [Halobiforma nitratireducens JCM 10879]
gi|445796514|gb|EMA47018.1| 30S ribosomal protein S17P [Halobiforma nitratireducens JCM 10879]
Length = 146
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 39 YIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHIS 98
Y +KCPF G + +RG++L G S M++T++V R Y V KY RY KR S IPAH+
Sbjct: 19 YDYEKCPFYGELPVRGQVLEGQVVSTDMDKTVVVEREYDVAVPKYDRYMKRRSRIPAHVP 78
Query: 99 PCFR-VKEGDHVIIGQCRPLSKT 120
+ GD V I + RPLSKT
Sbjct: 79 GVLEPLSVGDTVKIAETRPLSKT 101
>gi|313211872|emb|CBY16011.1| unnamed protein product [Oikopleura dioica]
Length = 73
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 44/69 (63%), Gaps = 9/69 (13%)
Query: 3 EQTEKAFLKQPG---------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIR 53
+Q EKA+ KQ K R+ KS+GLGFKTPREA EG YIDKKCPFTG V+IR
Sbjct: 4 QQVEKAYQKQSAVVYNAKKGSKAKKRYVKSVGLGFKTPREASEGAYIDKKCPFTGNVTIR 63
Query: 54 GRILAGTCH 62
GR+ G
Sbjct: 64 GRVFTGVVR 72
>gi|124028164|ref|YP_001013484.1| 30S ribosomal protein S17P [Hyperthermus butylicus DSM 5456]
gi|123978858|gb|ABM81139.1| 30S ribosomal protein S17P [Hyperthermus butylicus DSM 5456]
Length = 116
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+++G+ P E T D KCP+ G V +RG IL G KM T++V R YL++ +
Sbjct: 6 RNVGIPGVKPPER---TCNDPKCPWHGKVRVRGLILTGVVIKNKMKNTVVVEREYLYYDR 62
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+RYE+R S I AH PC + GD VIIG+ RPL+KTV F VL V+
Sbjct: 63 KYKRYERRRSRIHAHNPPCINAQPGDIVIIGETRPLAKTVHFVVLGVV 110
>gi|448302875|ref|ZP_21492825.1| 30S ribosomal protein S17P [Natronorubrum sulfidifaciens JCM 14089]
gi|445593882|gb|ELY48049.1| 30S ribosomal protein S17P [Natronorubrum sulfidifaciens JCM 14089]
Length = 144
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
K CPF G + +RG+IL G S M++T++V R Y V KY R KR S IPAH+
Sbjct: 22 KTCPFYGELPVRGQILEGQVVSTDMDKTVVVEREYDVAVPKYDRLMKRRSRIPAHVPGVL 81
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKV 128
+ GD V I + RPLSKT V++V
Sbjct: 82 EPLSVGDSVKIAETRPLSKTKSHVVVEV 109
>gi|16082263|ref|NP_394718.1| 30S ribosomal protein S17P [Thermoplasma acidophilum DSM 1728]
gi|74543401|sp|Q9HIR8.1|RS17_THEAC RecName: Full=30S ribosomal protein S17P
gi|10640608|emb|CAC12386.1| probable ribosomal protein S17 [Thermoplasma acidophilum]
Length = 109
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
+ ++IGL K P E D CP+ G +S+RG++L G SA M ++ +V R Y +
Sbjct: 2 YTRNIGLDVKLP----ESECNDPHCPYHGKLSVRGQVLTGKVVSANMTKSAVVAREYQQY 57
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
+ KY+R + H+ C ++K GD V +CR L+KT+ F +++
Sbjct: 58 IPKYERKATKIKKYHVHVPDCIKIKPGDTVRFAECRKLAKTISFVIVE 105
>gi|327400863|ref|YP_004341702.1| 30S ribosomal protein S17P [Archaeoglobus veneficus SNP6]
gi|327316371|gb|AEA46987.1| ribosomal protein S17P [Archaeoglobus veneficus SNP6]
Length = 109
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 21 WKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
+ IG+ + P + + DK CPF G++ +RG++ G ++ ++ R L +V
Sbjct: 1 MRDIGIDVRPPEKECD----DKHCPFHGSLPVRGQVFRGRV-VKTYEKSAVIEREMLRYV 55
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+RY K+ S + AH PC K GD V I +CRP+SKT F +++ I
Sbjct: 56 PKYERYLKKRSKLHAHNPPCIDAKPGDIVTIAECRPISKTKSFVIVERI 104
>gi|145591009|ref|YP_001153011.1| 30S ribosomal protein S17 [Pyrobaculum arsenaticum DSM 13514]
gi|145282777|gb|ABP50359.1| SSU ribosomal protein S17P [Pyrobaculum arsenaticum DSM 13514]
Length = 124
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%)
Query: 41 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 100
D CP+ G + +R ++L T +M + +V +LH+++KY RYE+R + + C
Sbjct: 21 DPLCPWHGHLKVRLKLLEVTVEKTRMRKAAVVVHEWLHYIRKYNRYERRRRKLHVRVPEC 80
Query: 101 FRVKEGDHVIIGQCRPLSKTVRFNVL 126
VK GD VII + RPLSKT+ + V+
Sbjct: 81 IEVKPGDKVIIAETRPLSKTISWVVI 106
>gi|448309703|ref|ZP_21499559.1| 30S ribosomal protein S17P [Natronorubrum bangense JCM 10635]
gi|445589560|gb|ELY43790.1| 30S ribosomal protein S17P [Natronorubrum bangense JCM 10635]
Length = 144
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
K CPF G + +RG+IL G S M++T++V R Y V KY R KR S IPAH+
Sbjct: 22 KTCPFYGELPVRGQILEGQVVSTDMDKTVVVEREYDVAVPKYDRLMKRRSRIPAHVPGVL 81
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKV 128
+ GD V I + RPLSKT V+++
Sbjct: 82 EPLSVGDSVKIAETRPLSKTKSHVVVEI 109
>gi|448298474|ref|ZP_21488503.1| 30S ribosomal protein S17P [Natronorubrum tibetense GA33]
gi|445591670|gb|ELY45871.1| 30S ribosomal protein S17P [Natronorubrum tibetense GA33]
Length = 147
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
+ CPF G + +RG+IL G S M++T++V R Y V KY R KR S +PAH+
Sbjct: 22 ETCPFYGELPVRGQILEGQVVSTDMDKTVVVEREYDVTVPKYDRQMKRRSRVPAHVPGVL 81
Query: 102 -RVKEGDHVIIGQCRPLSKTVRFNVLKV 128
++ GD V I + RPLSKT V++V
Sbjct: 82 EQLSVGDTVKIAETRPLSKTKSHVVVEV 109
>gi|76803066|ref|YP_331161.1| 30S ribosomal protein S17P [Natronomonas pharaonis DSM 2160]
gi|76558931|emb|CAI50527.1| 30S ribosomal protein S17 [Natronomonas pharaonis DSM 2160]
Length = 114
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 42 KKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCF 101
+ CPF G + +RG+++ GT S M RT+IV R Y V KY R KR S IPAH+
Sbjct: 22 ETCPFYGELPVRGQVIEGTVVSTDMERTVIVEREYDVNVPKYDRLMKRRSRIPAHVPEVL 81
Query: 102 R-VKEGDHVIIGQCRPLSKTVRFNVLKV 128
+ D V I + RPLSKT V++V
Sbjct: 82 EPLSVDDEVKIAETRPLSKTKSHVVVEV 109
>gi|13541165|ref|NP_110853.1| 30S ribosomal protein S17P [Thermoplasma volcanium GSS1]
gi|74576032|sp|Q97BW7.1|RS17_THEVO RecName: Full=30S ribosomal protein S17P
gi|14324553|dbj|BAB59480.1| ribosomal protein small subunit S11 [Thermoplasma volcanium GSS1]
Length = 109
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
++IGL P E D CPF G + +RG++L G S M R+++V R Y ++
Sbjct: 4 RNIGLDVSVP----EKECTDPHCPFHGNLPVRGQVLTGKVISTAMTRSVVVAREYQQYIP 59
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
KY+R + H+ C ++ GD V +CR L+KT+ F V++
Sbjct: 60 KYERKATKIKKYHVHVPDCIELRVGDTVRFAECRKLAKTISFVVVE 105
>gi|289597184|ref|YP_003483880.1| 30S ribosomal protein S17 [Aciduliprofundum boonei T469]
gi|289534971|gb|ADD09318.1| ribosomal protein S17P [Aciduliprofundum boonei T469]
Length = 109
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Query: 21 WKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
++ IG+ K P + D CP+ G + +RG+I+ G S KM T++V R YL +V
Sbjct: 3 YRDIGVDAKPPEKECN----DPNCPWHGNLKVRGQIMEGVVISDKMMNTVVVEREYLRYV 58
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KKY+RYEKR H PC K GD V +CRPLSKTV F V++ I
Sbjct: 59 KKYERYEKRRRRYHVHNPPCIDAKVGDKVRFMECRPLSKTVSFVVIEKI 107
>gi|344251444|gb|EGW07548.1| 40S ribosomal protein S11 [Cricetulus griseus]
Length = 78
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 65 KMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFN 124
KM T+I+ ++YLH+++ Y ++K H + H+SP D VI+G C PLSKTV FN
Sbjct: 2 KMQTTVIISQDYLHYIQNYDGFQKHHKIVSMHLSPFQGCTHRDIVIVGDCWPLSKTVHFN 61
Query: 125 VLKVIPAGSSGGAKKAF 141
VLKV A G KK F
Sbjct: 62 VLKVTQA---AGTKKQF 75
>gi|41615115|ref|NP_963613.1| 30S ribosomal protein S17P [Nanoarchaeum equitans Kin4-M]
gi|74580101|sp|Q74NJ4.1|RS17_NANEQ RecName: Full=30S ribosomal protein S17P
gi|40068839|gb|AAR39174.1| NEQ326 [Nanoarchaeum equitans Kin4-M]
Length = 113
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 41 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 100
DKKCP G + +RG G N+T+ + +++ KY+RYE R + I A++ C
Sbjct: 16 DKKCPHHGHLKVRGFFFKGKVIKKSDNKTVKIEIIRYYWLPKYERYELRRTRITAYLPEC 75
Query: 101 FR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAG 132
+ +KEGD+V+IG+ RPLSKT F VL + G
Sbjct: 76 LKDIKEGDYVLIGETRPLSKTKHFVVLGKLKKG 108
>gi|240279159|gb|EER42664.1| 40S ribosomal protein S11 [Ajellomyces capsulatus H143]
Length = 106
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 46/73 (63%), Gaps = 15/73 (20%)
Query: 1 MAEQTEKAFLKQPGKGGN---------------RFWKSIGLGFKTPREAIEGTYIDKKCP 45
+ Q+E+AF KQP N R++K +GLGF+TP+ AIEG+YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFLNSKQKSKSKKVGKGGRRWYKDVGLGFRTPKTAIEGSYIDKKCP 64
Query: 46 FTGTVSIRGRILA 58
F G VSIRGRIL
Sbjct: 65 FIGQVSIRGRILT 77
>gi|325969646|ref|YP_004245838.1| 30S ribosomal protein S17 [Vulcanisaeta moutnovskia 768-28]
gi|323708849|gb|ADY02336.1| 30S ribosomal protein S17P [Vulcanisaeta moutnovskia 768-28]
Length = 150
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 41 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 100
D +CP+ G +S+RG + T S RT V +LH+ KY+RYEKR I + C
Sbjct: 46 DPECPWHGYLSVRGHVFTVTVESVH-GRTATVIHEWLHYDPKYKRYEKRRKKIHVKVPSC 104
Query: 101 FRVKEGDHVIIGQCRPLSKTVRFNVL 126
V+ GD V IG+ RPL+KT+R ++
Sbjct: 105 IEVRPGDIVYIGETRPLAKTIRHVII 130
>gi|119719401|ref|YP_919896.1| ribosomal protein S17 [Thermofilum pendens Hrk 5]
gi|119524521|gb|ABL77893.1| SSU ribosomal protein S17P [Thermofilum pendens Hrk 5]
Length = 111
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 41 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 100
D CP+ G + +RG++L KM+ + YL++ +KY+RYE R + PC
Sbjct: 21 DPLCPWHGELPVRGQVLRLRVEKVKMHNVAVAVHEYLYYNEKYKRYEVRRKKKHVRVPPC 80
Query: 101 FRVKEGDHVIIGQCRPLSKTVRFNVL 126
VK GD VI+ + RPL+K+V F V+
Sbjct: 81 IPVKPGDEVIVAETRPLAKSVSFVVI 106
>gi|213512252|ref|NP_001134919.1| 40S ribosomal protein S11 [Salmo salar]
gi|209737182|gb|ACI69460.1| 40S ribosomal protein S11 [Salmo salar]
Length = 96
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 41/57 (71%), Gaps = 4/57 (7%)
Query: 86 YEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+EKRH N+ H+SP FR V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 40 FEKRHKNMSVHLSPAFRDVSVGDIVTVGECRPLSKTVRFNVLKVTKA---AGAKKQF 93
>gi|307595432|ref|YP_003901749.1| 30S ribosomal protein S17 [Vulcanisaeta distributa DSM 14429]
gi|307550633|gb|ADN50698.1| ribosomal protein S17P [Vulcanisaeta distributa DSM 14429]
Length = 150
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 41 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 100
D +CP+ G +S+RG++ T RT +LH+ KY+RYE+R + + PC
Sbjct: 46 DPECPWHGHLSVRGQVFTVTVEKV-YGRTATAIHEWLHYDPKYKRYERRRKKMHVRVPPC 104
Query: 101 FRVKEGDHVIIGQCRPLSKTVRFNVL 126
VK GD V IG+ RPL KTVR ++
Sbjct: 105 IDVKPGDIVYIGETRPLGKTVRHVII 130
>gi|431913835|gb|ELK15241.1| 40S ribosomal protein S11 [Pteropus alecto]
Length = 86
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 6/77 (7%)
Query: 65 KMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRF 123
KM RT I+ R+YLH+++ Y +EKR N+ H+S CFR V+ GD V +G+ +PL KT+ F
Sbjct: 2 KMQRTTIICRDYLHYIRNYNCFEKRRKNVSVHLSLCFRDVQIGDIVTVGEYKPLGKTMHF 61
Query: 124 NVLKVIPAGSSGGAKKA 140
N+LK S G KA
Sbjct: 62 NILK-----SQEGMHKA 73
>gi|255513595|gb|EET89861.1| ribosomal protein S17 [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 97
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 49/89 (55%)
Query: 41 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 100
D KCP G + RG L G S K +T+++ R Y ++KKY+R + S I A+ C
Sbjct: 5 DPKCPVHGNLKTRGSELVGVVVSDKAAKTVVIERPYTTYLKKYERSLRNTSRISAYNPQC 64
Query: 101 FRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
K GD V+I CR LSKT F V KV+
Sbjct: 65 IAAKTGDTVVISGCRRLSKTKAFVVTKVV 93
>gi|444722635|gb|ELW63318.1| 40S ribosomal protein S11 [Tupaia chinensis]
Length = 112
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 28/136 (20%)
Query: 1 MAE-QTEKAFLKQPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAG 59
MA+ QTE+A+ KQP N+ K + LG +T +E + Y + F S
Sbjct: 1 MADIQTERAYQKQPAIFQNK--KKVLLG-ETGKEKLPRYYKNISLGFNPPSS-------- 49
Query: 60 TCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI-IGQCRPLS 118
+YLH++ KY R++K H N+ H+SPCFR + D ++ +G+C PLS
Sbjct: 50 ---------------DYLHYICKYSRFKKGHKNMSVHLSPCFRDFQIDDIVTVGECWPLS 94
Query: 119 KTVRFNVLKVIPAGSS 134
KTV + VLKV A +
Sbjct: 95 KTVHYYVLKVTKAAGT 110
>gi|126459242|ref|YP_001055520.1| 30S ribosomal protein S17 [Pyrobaculum calidifontis JCM 11548]
gi|126248963|gb|ABO08054.1| SSU ribosomal protein S17P [Pyrobaculum calidifontis JCM 11548]
Length = 147
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
K+IG+ + P A+ D CP+ G + IR ++L T +M++ +V ++H++
Sbjct: 27 KNIGVPYVLPPAAVCD---DPLCPWHGHLKIRLKLLEVTVEKVRMHKAAVVTHEWVHYLP 83
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVL 126
KY RYE+R + + C VK GD VII + RPLSKT+ + V+
Sbjct: 84 KYNRYERRRRRMRVRVPECIEVKPGDKVIIAETRPLSKTIAWVVI 128
>gi|241645811|ref|XP_002409784.1| 40S ribosomal protein S11, putative [Ixodes scapularis]
gi|215501443|gb|EEC10937.1| 40S ribosomal protein S11, putative [Ixodes scapularis]
Length = 117
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 41/65 (63%), Gaps = 14/65 (21%)
Query: 1 MAEQTEKAFLKQPG---------KGGN-----RFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MAEQ E+AF KQP GN R+ K++GLGFKTPR+A GTYIDKKCPF
Sbjct: 49 MAEQNERAFQKQPTVFLNRKPTLPKGNPKRVLRYHKNVGLGFKTPRDASHGTYIDKKCPF 108
Query: 47 TGTVS 51
TG +
Sbjct: 109 TGRLD 113
>gi|399577355|ref|ZP_10771108.1| 30S ribosomal protein S17 [Halogranum salarium B-1]
gi|399237738|gb|EJN58669.1| 30S ribosomal protein S17 [Halogranum salarium B-1]
Length = 70
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%)
Query: 66 MNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKT 120
M++T++V R Y V KY RY KR S +PAH PC ++EGD V I + RPLSKT
Sbjct: 1 MDKTVVVEREYDVRVPKYDRYMKRRSRVPAHAPPCMDLQEGDTVRIAETRPLSKT 55
>gi|165970987|gb|AAI58781.1| LOC100169746 protein [Rattus norvegicus]
Length = 78
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 5/63 (7%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
F+K+I LGFKT +E +EG+YIDKKC F VSIRG+I +G K+ RTI + H+
Sbjct: 21 FYKNISLGFKTHQETVEGSYIDKKCSFIVNVSIRGQIFSGIMTKMKIQRTIAI-----HY 75
Query: 80 VKK 82
++K
Sbjct: 76 IQK 78
>gi|290558901|gb|EFD92291.1| ribosomal protein S17 [Candidatus Parvarchaeum acidophilus ARMAN-5]
Length = 103
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 27 GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRY 86
K P E D CP+ G + + GR G SAK N+T +V +KKY RY
Sbjct: 5 DLKAPEEKCN----DVHCPYHGNLRVHGRRFEGIVTSAKANKTAVVSWTVFRKLKKYDRY 60
Query: 87 EKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
K SN+ AH C K D V+I + RP+S+ RF V++
Sbjct: 61 IKVRSNVMAHNPDCVAAKLNDKVVIYETRPISRWKRFVVVR 101
>gi|344256170|gb|EGW12274.1| 40S ribosomal protein S11 [Cricetulus griseus]
Length = 123
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 61/123 (49%), Gaps = 16/123 (13%)
Query: 31 PREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRH 90
P+EAIEGTYID K PFTG + R IL+ +M RT+I +Y+++++ +
Sbjct: 2 PKEAIEGTYIDTKRPFTGNIFNRNLILSDAVTKMRMQRTVIC-WHYIYYMESAISLKSTT 60
Query: 91 SNIPAHISPCFR------------VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAK 138
PC V+ V +G+C+PLSKTV F+V KV A G K
Sbjct: 61 RTRLFTCRPCPLSSSPLPPPRLRDVQIETLVTLGECKPLSKTVCFHVFKVTKA---AGPK 117
Query: 139 KAF 141
K F
Sbjct: 118 KQF 120
>gi|431894139|gb|ELK03939.1| Zinc finger protein 133 [Pteropus alecto]
Length = 444
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 18 NRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIV 72
+R++K++ LGFK + AI+GTY DKKCPF VSI G IL+G KM R I++
Sbjct: 389 SRYYKNVDLGFKMHKAAIDGTYTDKKCPFASNVSILGCILSGVVTKTKMQRIIVI 443
>gi|171185191|ref|YP_001794110.1| 30S ribosomal protein S17 [Pyrobaculum neutrophilum V24Sta]
gi|170934403|gb|ACB39664.1| ribosomal protein S17 [Pyrobaculum neutrophilum V24Sta]
Length = 146
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IGL + P A+ D CP+ G + IR ++L T +M++ +V ++H+++
Sbjct: 27 RDIGLPYVQPPLAVCD---DPLCPWHGHLKIRLKLLEVTVEKVRMHKAAVVTHEWVHYIR 83
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVL 126
KY RYE+R I + C VK GD VII + RPLSKT+ + V+
Sbjct: 84 KYNRYERRRRRIKVRVPECIEVKPGDKVIIAETRPLSKTISWVVI 128
>gi|161485622|ref|NP_559506.2| 30S ribosomal protein S17 [Pyrobaculum aerophilum str. IM2]
Length = 121
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
K+IG+ P ++ D CP+ G + +R ++L T +M++ +V +LH+++
Sbjct: 2 KNIGIPHVLPPASVCD---DPLCPWHGHLKVRLKLLEVTVEKVRMHKAAVVIHEWLHYIR 58
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVL 126
KY RYE+R + + C VK GD VII + RPLSKT+ + V+
Sbjct: 59 KYNRYERRRKRMRVRVPECIEVKPGDKVIIAETRPLSKTIAWVVI 103
>gi|93140688|sp|Q8ZWL3.2|RS17_PYRAE RecName: Full=30S ribosomal protein S17P
Length = 123
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
K+IG+ P ++ D CP+ G + +R ++L T +M++ +V +LH+++
Sbjct: 4 KNIGIPHVLPPASVCD---DPLCPWHGHLKVRLKLLEVTVEKVRMHKAAVVIHEWLHYIR 60
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVL 126
KY RYE+R + + C VK GD VII + RPLSKT+ + V+
Sbjct: 61 KYNRYERRRKRMRVRVPECIEVKPGDKVIIAETRPLSKTIAWVVI 105
>gi|18160326|gb|AAL63688.1| ribosomal protein S17 [Pyrobaculum aerophilum str. IM2]
Length = 146
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
K+IG+ P ++ D CP+ G + +R ++L T +M++ +V +LH+++
Sbjct: 27 KNIGIPHVLPPASVCD---DPLCPWHGHLKVRLKLLEVTVEKVRMHKAAVVIHEWLHYIR 83
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVL 126
KY RYE+R + + C VK GD VII + RPLSKT+ + V+
Sbjct: 84 KYNRYERRRKRMRVRVPECIEVKPGDKVIIAETRPLSKTIAWVVI 128
>gi|424812839|ref|ZP_18238079.1| SSU ribosomal protein S17P [Candidatus Nanosalinarum sp. J07AB56]
gi|339757061|gb|EGQ40644.1| SSU ribosomal protein S17P [Candidatus Nanosalinarum sp. J07AB56]
Length = 97
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%)
Query: 41 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 100
D + G +RG+ GT S M+++ VR + KY+RYE+R++ + AH+
Sbjct: 8 DIRNQVDGEYPLRGKEFEGTVVSTAMDKSCTVRWEHTEPAPKYERYERRNTKVSAHVPES 67
Query: 101 FRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
++EGD V++ + RP+SKT V++V
Sbjct: 68 AELEEGDRVVVSETRPISKTKSHIVVEV 95
>gi|359416229|ref|ZP_09208581.1| 30S ribosomal protein S17P [Candidatus Haloredivivus sp. G17]
gi|358033432|gb|EHK01985.1| 30S ribosomal protein S17P [Candidatus Haloredivivus sp. G17]
Length = 96
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 50 VSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHV 109
+ +RG GT S KM ++ VR Y V KY+R E+R++ I H+ V+EGD V
Sbjct: 14 IPLRGNEFTGTVVSTKMQKSATVRWGYAEEVPKYERKERRNTKITVHVPDEIDVEEGDKV 73
Query: 110 IIGQCRPLSKTVRFNVLKVI 129
+ + RP+SKT +++VI
Sbjct: 74 TVVETRPISKTKSSMIVEVI 93
>gi|125591614|gb|EAZ31964.1| hypothetical protein OsJ_16138 [Oryza sativa Japonica Group]
Length = 55
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 38/53 (71%), Gaps = 15/53 (28%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGT 38
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPREAIEGT
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGT 53
>gi|119873193|ref|YP_931200.1| 30S ribosomal protein S17 [Pyrobaculum islandicum DSM 4184]
gi|119674601|gb|ABL88857.1| SSU ribosomal protein S17P [Pyrobaculum islandicum DSM 4184]
Length = 147
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IG+ + P A+ D CP+ G + IR ++L T +M++ +V ++H+++
Sbjct: 27 RDIGIPYILPPNAVCD---DPLCPWHGHLKIRLKLLEVTVEKVRMHKAAVVLHEWVHYIR 83
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVL 126
KY RYE+R I + C VK GD VII + RPL+KT+ + V+
Sbjct: 84 KYNRYERRRRRIHVRVPECIEVKPGDKVIIAETRPLAKTISWVVI 128
>gi|327311880|ref|YP_004338777.1| 30S ribosomal protein S17 [Thermoproteus uzoniensis 768-20]
gi|326948359|gb|AEA13465.1| 30S ribosomal protein S17P [Thermoproteus uzoniensis 768-20]
Length = 146
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 53/86 (61%)
Query: 41 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 100
D +CP+ G + IR ++L S +M++ +V ++H+V KY+RYE+R + + C
Sbjct: 43 DPECPWHGNLKIRTKLLEVEVESVRMHKAAVVIHEWMHYVPKYKRYERRRRKLHVRVPEC 102
Query: 101 FRVKEGDHVIIGQCRPLSKTVRFNVL 126
+K GD VII + RPL+KT+ + V+
Sbjct: 103 IEIKPGDRVIIAETRPLAKTISWVVI 128
>gi|374325586|ref|YP_005083783.1| 30S ribosomal protein S17 [Pyrobaculum sp. 1860]
gi|356640852|gb|AET31531.1| ribosomal protein S17 [Pyrobaculum sp. 1860]
Length = 146
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IG+ + P A+ D CP+ G + IR ++L T +M++ +V ++H+++
Sbjct: 27 RDIGVPYVLPPAAVCD---DPLCPWHGHLKIRLKLLEVTVEKVRMHKAAVVTHEWVHYIR 83
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVL 126
KY RYE+R + + C VK GD VII + RPLSKT+ + V+
Sbjct: 84 KYNRYERRRRRMRVRVPECIEVKPGDKVIIAETRPLSKTISWVVI 128
>gi|332025676|gb|EGI65837.1| 40S ribosomal protein S11 [Acromyrmex echinatior]
Length = 57
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 11/57 (19%)
Query: 5 TEKAFLKQPGKGGNR-----------FWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+E+AF KQP NR + +++GLGF+TPREA+EGTYIDKKCPFTG
Sbjct: 1 SERAFQKQPTIFLNRKKGLKRRKPMRYSRNVGLGFETPREALEGTYIDKKCPFTGNA 57
>gi|118795346|ref|XP_560930.4| Anopheles gambiae str. PEST AGAP012798-PA [Anopheles gambiae str.
PEST]
gi|116133209|gb|EAL42184.2| AGAP012798-PA [Anopheles gambiae str. PEST]
Length = 50
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 37/51 (72%), Gaps = 4/51 (7%)
Query: 93 IPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
+ H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV G+KK F+
Sbjct: 1 MSVHLSPCFRDVEAGDIVTVGECRPLSKTVRFNVLKV---SKMAGSKKKFS 48
>gi|352682710|ref|YP_004893234.1| 30S ribosomal protein S17p [Thermoproteus tenax Kra 1]
gi|350275509|emb|CCC82156.1| 30S ribosomal protein S17p [Thermoproteus tenax Kra 1]
Length = 147
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%)
Query: 41 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 100
D +CP+ G + IR + L S +M++ +V ++H+V KY+RYE+R I + C
Sbjct: 43 DPECPWHGHLKIRPKTLEVVVESVRMHKAAVVIHEWVHYVPKYKRYERRRRKIHVRVPEC 102
Query: 101 FRVKEGDHVIIGQCRPLSKTVRFNVL 126
VK GD VII + RPL+KT+ + V+
Sbjct: 103 IEVKPGDKVIIAETRPLAKTIAWVVI 128
>gi|149049874|gb|EDM02198.1| rCG36989 [Rattus norvegicus]
Length = 103
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 30/40 (75%)
Query: 31 PREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTI 70
P+EA GTYIDKKCPFT +SIRGRIL+G KM RT+
Sbjct: 2 PKEATPGTYIDKKCPFTVNISIRGRILSGVMTKIKMQRTM 41
>gi|241758435|ref|XP_002401844.1| 40S ribosomal protein S11, putative [Ixodes scapularis]
gi|215508515|gb|EEC17969.1| 40S ribosomal protein S11, putative [Ixodes scapularis]
Length = 50
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
Query: 93 IPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
+ H+SP FR V GD V +G+CRPLSKTVRFNVLKV A G+KK F M
Sbjct: 1 MSVHLSPAFRDVAIGDVVTVGECRPLSKTVRFNVLKVTKA---AGSKKQFLKM 50
>gi|356537660|ref|XP_003537343.1| PREDICTED: uncharacterized protein LOC100814125 [Glycine max]
Length = 236
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 26/30 (86%)
Query: 11 KQPGKGGNRFWKSIGLGFKTPREAIEGTYI 40
K PGKGGNRFWKSI +GFKTPREA++G +
Sbjct: 174 KSPGKGGNRFWKSIMVGFKTPREAMKGDFF 203
>gi|356565809|ref|XP_003551129.1| PREDICTED: uncharacterized protein LOC100804111 [Glycine max]
Length = 264
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/25 (92%), Positives = 23/25 (92%)
Query: 13 PGKGGNRFWKSIGLGFKTPREAIEG 37
PGKGG RFWKSI LGFKTPREAIEG
Sbjct: 195 PGKGGTRFWKSIVLGFKTPREAIEG 219
>gi|336322761|ref|YP_004602728.1| 30S ribosomal protein S17 [Flexistipes sinusarabici DSM 4947]
gi|336106342|gb|AEI14160.1| 30S ribosomal protein S17 [Flexistipes sinusarabici DSM 4947]
Length = 91
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 114
+I G S KM++TI+V+ L +YQ+Y KR AH P + GD V I +
Sbjct: 8 KIRKGVVTSNKMDKTIVVKVEGLKLHSRYQKYIKRSKEFKAH-DPNNECQMGDIVEIMET 66
Query: 115 RPLSKTVRFNVLKVI--PAGSSGGA 137
RPLSKT R+ +K+I P G++ +
Sbjct: 67 RPLSKTKRWRFVKLIERPIGAADNS 91
>gi|356533465|ref|XP_003535284.1| PREDICTED: uncharacterized protein LOC100813746 [Glycine max]
Length = 398
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 26/33 (78%)
Query: 11 KQPGKGGNRFWKSIGLGFKTPREAIEGTYIDKK 43
K P KGGNRFWKSI LGFKTPREAI+G + K
Sbjct: 191 KSPEKGGNRFWKSIVLGFKTPREAIKGNELSGK 223
>gi|307718215|ref|YP_003873747.1| 30S ribosomal protein S17 [Spirochaeta thermophila DSM 6192]
gi|306531940|gb|ADN01474.1| 30S ribosomal protein S17 [Spirochaeta thermophila DSM 6192]
Length = 99
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 30 TPRE-AIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTII--VRRNYLHFVKKYQRY 86
TP+E A+EG K P R RIL G S KM++TI+ VRR LH + Y++Y
Sbjct: 2 TPKETAVEGNV---KKPIRTE---RKRILVGEVVSDKMDKTIVVAVRRRKLHPL--YKKY 53
Query: 87 EKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
R + AH + GD V + + RP+SK R+ +L+++
Sbjct: 54 VTRTKKVKAH-DELNEARVGDVVRVVESRPISKEKRWRLLEIV 95
>gi|114561345|ref|YP_748858.1| 30S ribosomal protein S17 [Shewanella frigidimarina NCIMB 400]
gi|122301107|sp|Q089P5.1|RS17_SHEFN RecName: Full=30S ribosomal protein S17
gi|114332638|gb|ABI70020.1| SSU ribosomal protein S17P [Shewanella frigidimarina NCIMB 400]
Length = 82
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 50 VSIRGRILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
+S + R L G S KM+++I V R H + Y +Y KR + I AH + EGD
Sbjct: 1 MSDKARTLQGKVISNKMDKSITVAIERQVKHPI--YGKYIKRTTKIHAH-DETNQCNEGD 57
Query: 108 HVIIGQCRPLSKTVRFNVLKVI 129
V I QCRPLSKT + + +V+
Sbjct: 58 FVAISQCRPLSKTKSWTLAEVV 79
>gi|406909261|gb|EKD49550.1| 30S ribosomal protein S17 [uncultured bacterium]
Length = 98
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 54 GRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRH--SNI-PAHISPCFRVKEGDHVI 110
R+ G S KM++TI+V +H +K++ +Y KR+ S + P H + K+GD V
Sbjct: 21 NRVFKGVVVSDKMDKTIVVS---IHRMKQHAKYNKRYGVSKLYPVH-DEHNKFKKGDEVR 76
Query: 111 IGQCRPLSKTVRFNVL 126
+CRPLSKT R+ VL
Sbjct: 77 FAECRPLSKTKRWYVL 92
>gi|308272970|emb|CBX29574.1| 30S ribosomal protein S17 [uncultured Desulfobacterium sp.]
Length = 85
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 50 VSIRG--RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHI--SPCFRVKE 105
++IRG R + GT S KM++T++V+ L K Y +Y +R + AH + C K
Sbjct: 1 MNIRGIKRQMVGTVVSDKMDKTVVVQVERLIKHKFYHKYIRRRTKFSAHDEKNSC---KA 57
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAG 132
GD V+I + RPLSKT R+ + +++
Sbjct: 58 GDKVMITESRPLSKTKRWRISEIVEKA 84
>gi|422348969|ref|ZP_16429861.1| 30S ribosomal protein S17 [Sutterella wadsworthensis 2_1_59BFAA]
gi|404658729|gb|EKB31593.1| 30S ribosomal protein S17 [Sutterella wadsworthensis 2_1_59BFAA]
Length = 88
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRV 103
T T R L GT S+KM +T+ +V R H + Y +Y + AH
Sbjct: 1 MTETAQSLNRTLVGTVSSSKMEKTVTVLVERKVKHPL--YGKYVVKSKKYHAHDE--IGC 56
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVI 129
EGD V I +CRPLSKTV + V KV+
Sbjct: 57 NEGDKVEIAECRPLSKTVSWTVTKVL 82
>gi|149055982|gb|EDM07413.1| rCG54396, isoform CRA_d [Rattus norvegicus]
Length = 75
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 103 VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
V+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 37 VQIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 72
>gi|406946135|gb|EKD77423.1| 30S ribosomal protein S17 [uncultured bacterium]
Length = 79
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 55 RILAGTCHSAKMNR--TIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G S KMN+ T++V R H KY ++ KR S I AH +EGD VII
Sbjct: 6 RTLTGQVVSDKMNKSITVLVERRVKH--PKYGKFVKRSSKIHAHDETNV-CREGDVVIIS 62
Query: 113 QCRPLSKTVRFNVLKVI 129
+CRP+SKT ++ ++ I
Sbjct: 63 ECRPISKTKKWTFVEKI 79
>gi|345862660|ref|ZP_08814874.1| 30S ribosomal protein S17 [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345877736|ref|ZP_08829475.1| 50S ribosomal protein L5 [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|344225266|gb|EGV51630.1| 50S ribosomal protein L5 [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|345126002|gb|EGW55868.1| 30S ribosomal protein S17 [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 86
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 54 GRILAGTCHSAKMNR--TIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVII 111
R L G S+ M++ T++V R H + Y ++ +R + + AH GD V++
Sbjct: 8 NRTLVGQVVSSGMDKSITVVVERRVKHPI--YGKFVRRSTKVHAH-DESNECNSGDTVMV 64
Query: 112 GQCRPLSKTVRFNVLKVIPAGS 133
QCRPLSKT R+ ++K+I S
Sbjct: 65 EQCRPLSKTKRWRLVKIIERAS 86
>gi|414869623|tpg|DAA48180.1| TPA: putative MADS-box transcription factor family protein [Zea
mays]
Length = 337
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 23/26 (88%)
Query: 12 QPGKGGNRFWKSIGLGFKTPREAIEG 37
+P KG NRFW++IGLGFK P+EAI+G
Sbjct: 260 KPSKGRNRFWRNIGLGFKIPKEAIKG 285
>gi|256371224|ref|YP_003109048.1| 30S ribosomal protein S17 [Acidimicrobium ferrooxidans DSM 10331]
gi|256007808|gb|ACU53375.1| ribosomal protein S17 [Acidimicrobium ferrooxidans DSM 10331]
Length = 90
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 53 RGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R ++ G SAKM++TI+V + +YQR R + AH P +EGD V I
Sbjct: 11 RRKVREGIVASAKMDKTIVVEIHQRVRHPRYQRTIARRRRLYAH-DPANEAREGDRVEIA 69
Query: 113 QCRPLSKTVRFNVLKVI 129
+ RPLS+ R+ +++++
Sbjct: 70 ETRPLSRLKRWRLVRIV 86
>gi|91791548|ref|YP_561199.1| 30S ribosomal protein S17 [Shewanella denitrificans OS217]
gi|123357234|sp|Q12SV0.1|RS17_SHEDO RecName: Full=30S ribosomal protein S17
gi|91713550|gb|ABE53476.1| SSU ribosomal protein S17P [Shewanella denitrificans OS217]
Length = 82
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 50 VSIRGRILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
+S + R L G S KM+++I V R H + Y +Y KR + I AH + EGD
Sbjct: 1 MSDKIRTLQGRVTSNKMDKSITVAIERQVKHPL--YGKYIKRTTKIHAH-DETNQCNEGD 57
Query: 108 HVIIGQCRPLSKTVRFNVLKVI 129
V I QCRPLSKT + +++V+
Sbjct: 58 VVTISQCRPLSKTKSWALVEVV 79
>gi|160872735|ref|ZP_02062867.1| 30S ribosomal protein S17 [Rickettsiella grylli]
gi|159121534|gb|EDP46872.1| 30S ribosomal protein S17 [Rickettsiella grylli]
Length = 98
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 11/81 (13%)
Query: 54 GRILAGTCHSAKMNRTI---IVRRNYLHFVKKYQRYEKRHSNIPAHI--SPCFRVKEGDH 108
R L G S KM++TI IVRR H KY +Y KR S I AH + CF EGD
Sbjct: 8 NRTLMGQVISNKMDKTINVLIVRREK-H--PKYGKYLKRSSKILAHDPENSCF---EGDT 61
Query: 109 VIIGQCRPLSKTVRFNVLKVI 129
V+I + RP+SK + +LKV+
Sbjct: 62 VLIQEGRPISKRKAWTLLKVV 82
>gi|119947117|ref|YP_944797.1| 30S ribosomal protein S17 [Psychromonas ingrahamii 37]
gi|119865721|gb|ABM05198.1| SSU ribosomal protein S17P [Psychromonas ingrahamii 37]
Length = 83
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 53 RGRILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
R R L G SAKM+++I+V R H + Y ++ +R + + H + EGD V+
Sbjct: 5 RTRTLQGKVISAKMDKSIVVAIERKVKHPL--YGKFMRRTTKLHVH-DETNQCSEGDTVL 61
Query: 111 IGQCRPLSKTVRFNVLKVI 129
I +CRPLSKT + +++++
Sbjct: 62 ISECRPLSKTKSWTLVEIV 80
>gi|24371838|ref|NP_715880.1| 30S ribosomal protein S17 RpsQ [Shewanella oneidensis MR-1]
gi|113968553|ref|YP_732346.1| 30S ribosomal protein S17 [Shewanella sp. MR-4]
gi|114045716|ref|YP_736266.1| 30S ribosomal protein S17 [Shewanella sp. MR-7]
gi|117918666|ref|YP_867858.1| 30S ribosomal protein S17 [Shewanella sp. ANA-3]
gi|81845939|sp|Q8EK60.1|RS17_SHEON RecName: Full=30S ribosomal protein S17
gi|123030065|sp|Q0HNS8.1|RS17_SHESM RecName: Full=30S ribosomal protein S17
gi|123326997|sp|Q0I096.1|RS17_SHESR RecName: Full=30S ribosomal protein S17
gi|166220898|sp|A0KRN3.1|RS17_SHESA RecName: Full=30S ribosomal protein S17
gi|24345651|gb|AAN53325.1| 30S ribosomal protein S17 RpsQ [Shewanella oneidensis MR-1]
gi|113883237|gb|ABI37289.1| SSU ribosomal protein S17P [Shewanella sp. MR-4]
gi|113887158|gb|ABI41209.1| SSU ribosomal protein S17P [Shewanella sp. MR-7]
gi|117610998|gb|ABK46452.1| SSU ribosomal protein S17P [Shewanella sp. ANA-3]
Length = 82
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 50 VSIRGRILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
+S + R L G S KM++TI V R H + Y +Y KR + I AH + EGD
Sbjct: 1 MSDKIRTLQGRVTSNKMDKTITVAIERQVKHPI--YGKYIKRTTKIHAH-DEANQCNEGD 57
Query: 108 HVIIGQCRPLSKTVRFNVLKVI 129
V I +CRPLSKT + +++V+
Sbjct: 58 VVAIRECRPLSKTKSWTLVEVV 79
>gi|399908610|ref|ZP_10777162.1| 30S ribosomal protein S17 [Halomonas sp. KM-1]
Length = 86
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 53 RGRILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
+ R L G S KM+++I+V R H + Y +Y KR + + AH + K GD V
Sbjct: 6 KARTLTGKVVSDKMDKSIVVMIERRERHPI--YGKYVKRSTKLHAH-DEANQAKAGDTVS 62
Query: 111 IGQCRPLSKTVRFNVLKVI 129
I +CRPLSK + +++VI
Sbjct: 63 IQECRPLSKKKAWTLVEVI 81
>gi|224370682|ref|YP_002604846.1| 30S ribosomal protein S17 [Desulfobacterium autotrophicum HRM2]
gi|259494777|sp|C0Q9W4.1|RS17_DESAH RecName: Full=30S ribosomal protein S17
gi|223693399|gb|ACN16682.1| RpsQ [Desulfobacterium autotrophicum HRM2]
Length = 85
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 53 RGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R R+L GT S KM+++++V L + Y++Y H AH + GD V I
Sbjct: 6 RKRVLLGTVVSNKMDKSVVVEVERLVQHRVYKKYITSHKKYAAHDETQL-CQIGDMVKIT 64
Query: 113 QCRPLSKTVRFNVLKVI 129
+ RPLSKT RF V +++
Sbjct: 65 ESRPLSKTKRFRVSEIV 81
>gi|307543834|ref|YP_003896313.1| 30S ribosomal protein S17 [Halomonas elongata DSM 2581]
gi|307215858|emb|CBV41128.1| 30S ribosomal protein S17 [Halomonas elongata DSM 2581]
Length = 86
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 53 RGRILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
+ R L G S KM+++I+V R H + Y +Y KR + + AH + K GD V
Sbjct: 6 KARTLTGKVVSDKMDKSIVVMIERRERHPI--YGKYVKRSTKLHAH-DATNQAKAGDTVS 62
Query: 111 IGQCRPLSKTVRFNVLKVI 129
I +CRPLSK + +++V+
Sbjct: 63 IEECRPLSKNKSWTLVEVV 81
>gi|386346275|ref|YP_006044524.1| 30S ribosomal protein S17 [Spirochaeta thermophila DSM 6578]
gi|339411242|gb|AEJ60807.1| 30S ribosomal protein S17 [Spirochaeta thermophila DSM 6578]
Length = 99
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 30 TPRE-AIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTII--VRRNYLHFVKKYQRY 86
TP+E A+EG + K G RIL G S KM++TI+ VRR LH + Y++Y
Sbjct: 2 TPKETAVEGN-VKKPIRTEG-----KRILVGEVVSDKMDKTIVVAVRRRKLHPL--YKKY 53
Query: 87 EKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
R + AH + GD V + + RP+SK R+ +L+++
Sbjct: 54 VTRTKKVKAH-DELNEARVGDIVRVVESRPISKEKRWRLLEIV 95
>gi|407893930|ref|ZP_11152960.1| 30S ribosomal protein S17 [Diplorickettsia massiliensis 20B]
Length = 101
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G S KM++TI + R H KY +Y KR + + H P + KEGD V+I
Sbjct: 9 RTLTGRVVSDKMDKTINVYIERRVKH--PKYGKYLKRSTKLLVH-DPENQGKEGDQVVIV 65
Query: 113 QCRPLSKTVRFNVLKVI 129
+ RP+SK + +LKV+
Sbjct: 66 ESRPVSKRKAWTLLKVV 82
>gi|359786089|ref|ZP_09289229.1| 30S ribosomal protein S17 [Halomonas sp. GFAJ-1]
gi|359296582|gb|EHK60830.1| 30S ribosomal protein S17 [Halomonas sp. GFAJ-1]
Length = 86
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 53 RGRILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
+ R L G S KM+++I+V R H + Y +Y KR + + AH + K GD V
Sbjct: 6 KARTLTGKVVSDKMDKSIVVMIERRERHPI--YGKYVKRSTKLHAH-DEANQAKAGDTVS 62
Query: 111 IGQCRPLSKTVRFNVLKVI 129
I +CRPLSK + +++V+
Sbjct: 63 IQECRPLSKKKAWTLVEVV 81
>gi|406989317|gb|EKE09109.1| hypothetical protein ACD_16C00213G0032 [uncultured bacterium]
Length = 79
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 55 RILAGTCHSAKMNRTIIVR--RNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
RIL GT SAK ++TI VR R H + Y ++ R AH R KEGD V I
Sbjct: 4 RILRGTVVSAKCDKTITVRVERRVKHPL--YHKFISRSKKYAAH-DEQNRFKEGDEVNIQ 60
Query: 113 QCRPLSKTVRFNVL 126
+C+P+SK+ R+ V+
Sbjct: 61 ECKPISKSKRWEVI 74
>gi|406980275|gb|EKE01900.1| 30S ribosomal protein S17 [uncultured bacterium]
Length = 92
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 55 RILAGTCHSAKMNRTIIVR--RNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G+ S KM++TI+V R H + Y +Y KR + I AH EGD VII
Sbjct: 9 RTLRGSVVSNKMDKTIVVLVVRKIKHPL--YGKYIKRSTKIHAHDEKNI-CSEGDVVIIA 65
Query: 113 QCRPLSKTVRFNVLKVIPAGSSGGAKK 139
+ RP+S+T R+ + +V+ G+++
Sbjct: 66 ESRPISRTKRWKLQEVVEKAIKDGSQE 92
>gi|336315951|ref|ZP_08570856.1| 30S ribosomal protein S17 [Rheinheimera sp. A13L]
gi|335879797|gb|EGM77691.1| 30S ribosomal protein S17 [Rheinheimera sp. A13L]
Length = 84
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 52 IRGRILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHV 109
I R L G S KM+++I V RN H + Y ++ R + + H + KEGD V
Sbjct: 4 INTRTLQGKVISNKMDKSITVAIERNVKHPI--YGKFITRTTKLHVH-DEANQCKEGDIV 60
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGS 133
I +CRPLSKT + ++ V+ + S
Sbjct: 61 TIRECRPLSKTKSWTLVSVVESAS 84
>gi|90409299|ref|ZP_01217396.1| ribosomal protein S17 [Psychromonas sp. CNPT3]
gi|90309593|gb|EAS37781.1| ribosomal protein S17 [Psychromonas sp. CNPT3]
Length = 83
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 55 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G SAKM+++I+V R H + Y ++ KR + I AH + EGD V I
Sbjct: 7 RTLQGKVISAKMDKSIVVAIERKVKHPL--YGKFMKRTTKIHAH-DETNQCSEGDLVKIS 63
Query: 113 QCRPLSKTVRFNVLKVI 129
+CRPLSKT + + +++
Sbjct: 64 ECRPLSKTKSWTLAEIV 80
>gi|338999020|ref|ZP_08637675.1| 30S ribosomal protein S17 [Halomonas sp. TD01]
gi|338764041|gb|EGP19018.1| 30S ribosomal protein S17 [Halomonas sp. TD01]
Length = 86
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 53 RGRILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
+ R L G S KM+++I+V R H + Y +Y KR + + AH + K GD V
Sbjct: 6 KTRTLTGKVVSDKMDKSIVVMIERRERHPI--YGKYVKRSTKLHAH-DEANQAKAGDTVS 62
Query: 111 IGQCRPLSKTVRFNVLKVI 129
I +CRPLSK + +++V+
Sbjct: 63 IQECRPLSKKKAWTLVEVV 81
>gi|120596998|ref|YP_961572.1| 30S ribosomal protein S17 [Shewanella sp. W3-18-1]
gi|126176346|ref|YP_001052495.1| 30S ribosomal protein S17 [Shewanella baltica OS155]
gi|146294832|ref|YP_001185256.1| 30S ribosomal protein S17 [Shewanella putrefaciens CN-32]
gi|152998758|ref|YP_001364439.1| 30S ribosomal protein S17 [Shewanella baltica OS185]
gi|160873335|ref|YP_001552651.1| 30S ribosomal protein S17 [Shewanella baltica OS195]
gi|217975192|ref|YP_002359943.1| 30S ribosomal protein S17 [Shewanella baltica OS223]
gi|373951447|ref|ZP_09611408.1| 30S ribosomal protein S17 [Shewanella baltica OS183]
gi|378706573|ref|YP_005271467.1| 30S ribosomal protein S17 [Shewanella baltica OS678]
gi|386311964|ref|YP_006008129.1| 30S ribosomal protein S17 [Shewanella putrefaciens 200]
gi|386322733|ref|YP_006018850.1| 30S ribosomal protein S17 [Shewanella baltica BA175]
gi|386343098|ref|YP_006039464.1| 30S ribosomal protein S17 [Shewanella baltica OS117]
gi|418025010|ref|ZP_12663990.1| 30S ribosomal protein S17 [Shewanella baltica OS625]
gi|166220894|sp|A3DA63.1|RS17_SHEB5 RecName: Full=30S ribosomal protein S17
gi|166220895|sp|A6WHT7.1|RS17_SHEB8 RecName: Full=30S ribosomal protein S17
gi|166220897|sp|A4YBX4.1|RS17_SHEPC RecName: Full=30S ribosomal protein S17
gi|166220899|sp|A1REC3.1|RS17_SHESW RecName: Full=30S ribosomal protein S17
gi|189029657|sp|A9KWB1.1|RS17_SHEB9 RecName: Full=30S ribosomal protein S17
gi|254811376|sp|B8EBJ6.1|RS17_SHEB2 RecName: Full=30S ribosomal protein S17
gi|120557091|gb|ABM23018.1| SSU ribosomal protein S17P [Shewanella sp. W3-18-1]
gi|125999551|gb|ABN63626.1| SSU ribosomal protein S17P [Shewanella baltica OS155]
gi|145566522|gb|ABP77457.1| SSU ribosomal protein S17P [Shewanella putrefaciens CN-32]
gi|151363376|gb|ABS06376.1| ribosomal protein S17 [Shewanella baltica OS185]
gi|160858857|gb|ABX47391.1| ribosomal protein S17 [Shewanella baltica OS195]
gi|217500327|gb|ACK48520.1| ribosomal protein S17 [Shewanella baltica OS223]
gi|315265562|gb|ADT92415.1| 30S ribosomal protein S17 [Shewanella baltica OS678]
gi|319424589|gb|ADV52663.1| 30S ribosomal protein S17 [Shewanella putrefaciens 200]
gi|333816878|gb|AEG09544.1| 30S ribosomal protein S17 [Shewanella baltica BA175]
gi|334865499|gb|AEH15970.1| 30S ribosomal protein S17 [Shewanella baltica OS117]
gi|353535423|gb|EHC04985.1| 30S ribosomal protein S17 [Shewanella baltica OS625]
gi|373888047|gb|EHQ16939.1| 30S ribosomal protein S17 [Shewanella baltica OS183]
Length = 82
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 50 VSIRGRILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
+S + R L G S KM+++I V R H + Y +Y KR + I AH + EGD
Sbjct: 1 MSDKIRTLQGRVTSNKMDKSITVAIERQVKHPI--YGKYIKRTTKIHAH-DETNQCNEGD 57
Query: 108 HVIIGQCRPLSKTVRFNVLKVI 129
V I +CRPLSKT + +++V+
Sbjct: 58 LVAIRECRPLSKTKSWTLVEVV 79
>gi|239618256|ref|YP_002941578.1| 30S ribosomal protein S17 [Kosmotoga olearia TBF 19.5.1]
gi|259494786|sp|C5CGQ5.1|RS17_KOSOT RecName: Full=30S ribosomal protein S17
gi|239507087|gb|ACR80574.1| ribosomal protein S17 [Kosmotoga olearia TBF 19.5.1]
Length = 101
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 9/86 (10%)
Query: 57 LAGTCHSAKMNRTIIVR--RNYLH--FVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
L GT S KM++T++VR R + H + K +R +K H++ + GD V I
Sbjct: 6 LVGTVVSNKMDKTVVVRVERTFAHPLYKKTVKRAKKYHAHDEDNSCGI-----GDIVEIE 60
Query: 113 QCRPLSKTVRFNVLKVIPAGSSGGAK 138
+CRPLSKT +F V++++ G K
Sbjct: 61 ECRPLSKTKKFKVVRIVKKSVFGEEK 86
>gi|410638213|ref|ZP_11348777.1| small subunit ribosomal protein S17 [Glaciecola lipolytica E3]
gi|410142133|dbj|GAC15982.1| small subunit ribosomal protein S17 [Glaciecola lipolytica E3]
Length = 86
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 10/85 (11%)
Query: 51 SIRGRILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDH 108
++RGR++ S KM++TI +V R H + Y +++KR + + AH + EGD
Sbjct: 8 TVRGRVV-----SNKMDKTITVVVERFVKHPI--YGKFQKRSTKLHAH-DETNQCNEGDV 59
Query: 109 VIIGQCRPLSKTVRFNVLKVIPAGS 133
V I +CRPLSK+ + ++ V+ +
Sbjct: 60 VTITECRPLSKSKNWTLVDVVTKAT 84
>gi|406940791|gb|EKD73455.1| 30S ribosomal protein S17 [uncultured bacterium]
Length = 92
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 52 IRGRILAGTCHSAKMNRTIIVR--RNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHV 109
I GR + G S KMN+TI+V R H + Y +Y ++ S + AH + K GD V
Sbjct: 6 ISGRSVIGKVISNKMNKTIVVEVERKVKHPL--YGKYMRKFSRMYAHDNENI-CKIGDIV 62
Query: 110 IIGQCRPLSKTVRFNVLKVIPAGSSGGA 137
I CRPLSKT + +++VI G A
Sbjct: 63 QIKMCRPLSKTKSWMLVQVINQGEKETA 90
>gi|444725091|gb|ELW65670.1| Vasculin [Tupaia chinensis]
Length = 510
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 65 KMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR 102
KM TII+ R Y H+++KY R+EK H N+ P FR
Sbjct: 6 KMEMTIIICRGYFHYIRKYNRFEKGHKNMSVQPLPSFR 43
>gi|206900101|ref|YP_002250710.1| 30S ribosomal protein S17 [Dictyoglomus thermophilum H-6-12]
gi|206739204|gb|ACI18262.1| ribosomal protein S17 [Dictyoglomus thermophilum H-6-12]
Length = 111
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 57 LAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 114
L G SAKM +TI+V + Y H + Y++ R AH KEGD V+I +
Sbjct: 7 LIGKVVSAKMQKTIVVLVEQTYTHPL--YKKTVTRRKKYKAH-DENQEAKEGDIVLIRET 63
Query: 115 RPLSKTVRFNVLKVIPAGS 133
RPLSK R+ ++++I G
Sbjct: 64 RPLSKEKRWRLVRIIKRGE 82
>gi|352105694|ref|ZP_08960901.1| 30S ribosomal protein S17 [Halomonas sp. HAL1]
gi|359394370|ref|ZP_09187423.1| 30S ribosomal protein S17 [Halomonas boliviensis LC1]
gi|350598271|gb|EHA14393.1| 30S ribosomal protein S17 [Halomonas sp. HAL1]
gi|357971617|gb|EHJ94062.1| 30S ribosomal protein S17 [Halomonas boliviensis LC1]
Length = 86
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 55 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G S KM+++I+V R H + Y +Y KR + + AH + K GD V I
Sbjct: 8 RTLTGKVVSDKMDKSIVVMIERRERHPI--YGKYVKRSTKLHAH-DEANQAKAGDTVSIQ 64
Query: 113 QCRPLSKTVRFNVLKVI 129
+CRPLSK + +++V+
Sbjct: 65 ECRPLSKKKAWTLVEVV 81
>gi|294142924|ref|YP_003558902.1| 30S ribosomal protein S17 [Shewanella violacea DSS12]
gi|293329393|dbj|BAJ04124.1| ribosomal protein S17 [Shewanella violacea DSS12]
Length = 82
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 50 VSIRGRILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
+S + R L G S KM+++I V R H + Y +Y KR + I AH + EGD
Sbjct: 1 MSDKIRTLQGRVLSNKMDKSITVAIERKVKHPL--YGKYLKRTTKIHAH-DESNQCNEGD 57
Query: 108 HVIIGQCRPLSKTVRFNVLKVI 129
V I +CRPLSKT + +++V+
Sbjct: 58 VVTIRECRPLSKTKSWTLVEVV 79
>gi|148655328|ref|YP_001275533.1| 30S ribosomal protein S17 [Roseiflexus sp. RS-1]
gi|166220891|sp|A5USI0.1|RS17_ROSS1 RecName: Full=30S ribosomal protein S17
gi|148567438|gb|ABQ89583.1| SSU ribosomal protein S17P [Roseiflexus sp. RS-1]
Length = 86
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 58 AGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPL 117
G S KM +T++V +YL Y++ +R S AH R+ GD V IG+ RPL
Sbjct: 11 VGRVVSNKMQKTVVVAVDYLKPHPLYRKIIRRTSKFHAHDEQQCRI--GDIVRIGETRPL 68
Query: 118 SKTVRFNVLKVIPAGSSG 135
SKT R+ V+++I
Sbjct: 69 SKTKRWEVVEIIKRNEEA 86
>gi|374318673|ref|YP_005065172.1| 30S ribosomal protein S17 [Mycoplasma haemocanis str. Illinois]
gi|363989739|gb|AEW45929.1| 30S ribosomal protein S17 [Mycoplasma haemocanis str. Illinois]
Length = 86
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 53 RGRILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
R ++L G S K ++TI+V R+++H Y++ H AH KEGD V
Sbjct: 6 RKKVLQGVVTSTKSSKTIVVTVERDFMHSF--YKKRVTVHKKFHAH-DELETAKEGDKVK 62
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSS 134
I CRP S R+ +L+VI +S
Sbjct: 63 IVSCRPFSALKRWRLLEVIQTRNS 86
>gi|158520734|ref|YP_001528604.1| 30S ribosomal protein S17 [Desulfococcus oleovorans Hxd3]
gi|226697966|sp|A8ZV66.1|RS17_DESOH RecName: Full=30S ribosomal protein S17
gi|158509560|gb|ABW66527.1| ribosomal protein S17 [Desulfococcus oleovorans Hxd3]
Length = 85
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 114
R GT S KM++T+IV L ++Y++Y +R + AH + GD VII +
Sbjct: 8 RQFEGTVVSDKMDKTVIVAVERLVKHQEYKKYVRRTAKFAAH-DEQNQCAVGDKVIITES 66
Query: 115 RPLSKTVRFNVLKVIP 130
RPLS+T + V+ V+
Sbjct: 67 RPLSRTKHWRVVNVVE 82
>gi|386828745|ref|ZP_10115852.1| 30S ribosomal protein S17 [Beggiatoa alba B18LD]
gi|386429629|gb|EIJ43457.1| 30S ribosomal protein S17 [Beggiatoa alba B18LD]
Length = 90
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
G + + R L G S KM++TI V + KY +Y KR + + H +EGD
Sbjct: 5 GEQTDKVRTLTGRVVSNKMDKTITVLIERMVKHPKYGKYIKRSTKLHVHDEENT-CQEGD 63
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAGSS 134
V+I +CRP+SKT + + KV+ +
Sbjct: 64 VVLIEECRPISKTKAWRLNKVVTRAEA 90
>gi|385860327|ref|YP_005906837.1| 30S ribosomal protein S17 [Mycoplasma haemofelis Ohio2]
gi|334194028|gb|AEG73756.1| 30S ribosomal protein S17 [Mycoplasma haemofelis Ohio2]
Length = 86
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 53 RGRILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
R ++L G S K ++TI+V R+++H Y++ H AH KEGD V
Sbjct: 6 RKKVLQGVVTSTKSSKTIVVTVERDFMHSF--YKKRVTVHKKFHAH-DELETAKEGDKVK 62
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSS 134
I CRP S R+ +L+VI +S
Sbjct: 63 IISCRPFSALKRWRLLEVIQTRNS 86
>gi|334143230|ref|YP_004536386.1| 30S ribosomal protein S17 [Thioalkalimicrobium cyclicum ALM1]
gi|333964141|gb|AEG30907.1| 30S ribosomal protein S17 [Thioalkalimicrobium cyclicum ALM1]
Length = 87
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
T +++ R AG S M+ +I+V KY++Y K+ + I AH + + GD
Sbjct: 2 STENVKARTRAGVVVSNSMDSSIVVLTERYEKHAKYKKYVKKSTKIMAH-DAGNQCQVGD 60
Query: 108 HVIIGQCRPLSKTVRFNVLKV 128
V I +CRPLSK + +++V
Sbjct: 61 KVTIQECRPLSKRKSWTLVEV 81
>gi|321310971|ref|YP_004193300.1| 30S ribosomal protein S17 [Mycoplasma haemofelis str. Langford 1]
gi|319802815|emb|CBY93461.1| ribosomal protein S17 [Mycoplasma haemofelis str. Langford 1]
Length = 86
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 53 RGRILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
R ++L G S K ++TI+V R+++H Y++ H AH KEGD V
Sbjct: 6 RKKVLQGVVTSTKSSKTIVVTVERDFMHSF--YKKRVTVHKKFHAH-DELETAKEGDKVK 62
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSS 134
I CRP S R+ +L+VI +S
Sbjct: 63 IISCRPFSALKRWRLLEVIQTRNS 86
>gi|347738468|ref|ZP_08869971.1| 30S ribosomal protein S17 [Azospirillum amazonense Y2]
gi|346918499|gb|EGY00445.1| 30S ribosomal protein S17 [Azospirillum amazonense Y2]
Length = 85
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 55 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R+L GT S K ++T+IV R +H V Y+++ K+ AH K GD V I
Sbjct: 4 RVLQGTVVSDKGDKTVIVLVERRVMHPV--YKKFIKQSKKYAAH-DEQNAYKAGDTVTIE 60
Query: 113 QCRPLSKTVRFNVLKVIPAGSSGGA 137
+CRP+SK R+ V+ V A SG A
Sbjct: 61 ECRPISKRKRWAVV-VESAAPSGAA 84
>gi|56461015|ref|YP_156296.1| 30S ribosomal protein S17 [Idiomarina loihiensis L2TR]
gi|81821711|sp|Q5QXX3.1|RS17_IDILO RecName: Full=30S ribosomal protein S17
gi|56180025|gb|AAV82747.1| Ribosomal protein S17 [Idiomarina loihiensis L2TR]
Length = 87
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 53 RGRILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
R R L G S KM++TI V R H V Y +Y R + + AH +VK GD VI
Sbjct: 6 RVRTLQGKVVSDKMDKTITVAVERRVKHPV--YGKYITRTTKVHAH-DEENQVKAGDTVI 62
Query: 111 IGQCRPLSKTVRFNVLKVIPAGS 133
+ +CRPLSK + + +++ +
Sbjct: 63 VRECRPLSKNKSWTLEEIVDRAT 85
>gi|218294763|ref|ZP_03495617.1| ribosomal protein S17 [Thermus aquaticus Y51MC23]
gi|94729|pir||S15436 ribosomal protein S17 - Thermus aquaticus
gi|48103|emb|CAA39893.1| ribosomal protein S17 [Thermus aquaticus]
gi|218244671|gb|EED11195.1| ribosomal protein S17 [Thermus aquaticus Y51MC23]
Length = 105
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
++L G S KM +T+ +V R + H + Y + KR AH P R K GD V I
Sbjct: 4 KVLTGVVVSDKMQKTVTVLVERQFPHPL--YGKVIKRSKKYLAH-DPEERYKVGDVVEII 60
Query: 113 QCRPLSKTVRFNVLKVIPAG 132
+ RP+SK RF VL+++ G
Sbjct: 61 EARPISKRKRFRVLRLVEEG 80
>gi|291286321|ref|YP_003503137.1| 30S ribosomal protein S17 [Denitrovibrio acetiphilus DSM 12809]
gi|290883481|gb|ADD67181.1| 30S ribosomal protein S17 [Denitrovibrio acetiphilus DSM 12809]
Length = 91
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHI--SPCFRVKEGDHVIIG 112
++ G S KM++T++V+ L +YQ++ KR N AH + C + GD V I
Sbjct: 8 KVRKGVVVSDKMDKTVVVKVQNLKLHPRYQKFIKRSKNFKAHDENNDC---RMGDTVEIV 64
Query: 113 QCRPLSKTVRFNVLKVI 129
+ RPLSK + V K+I
Sbjct: 65 ETRPLSKDKHWRVTKII 81
>gi|14278546|pdb|1I94|Q Chain Q, Crystal Structures Of The Small Ribosomal Subunit With
Tetracycline, Edeine And If3
gi|14278567|pdb|1I95|Q Chain Q, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With Edeine
gi|14278588|pdb|1I96|Q Chain Q, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With The Translation
Initiation Factor If3 (C-Terminal Domain)
gi|14278610|pdb|1I97|Q Chain Q, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With Tetracycline
Length = 104
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
++L G S KM +T+ +V R + H + Y + KR AH P R K GD V I
Sbjct: 3 KVLTGVVVSDKMQKTVTVLVERQFPHPL--YGKVIKRSKKYLAH-DPEERYKVGDVVEII 59
Query: 113 QCRPLSKTVRFNVLKVIPAG 132
+ RP+SK RF VL+++ G
Sbjct: 60 EARPISKRKRFRVLRLVEEG 79
>gi|374619067|ref|ZP_09691601.1| SSU ribosomal protein S17P [gamma proteobacterium HIMB55]
gi|374302294|gb|EHQ56478.1| SSU ribosomal protein S17P [gamma proteobacterium HIMB55]
Length = 89
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 54 GRILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVII 111
R L G S KM++TI +V R H V Y +Y R S + AH R GD V++
Sbjct: 8 ARTLQGRVVSDKMDKTITVLVERRVKHPV--YGKYITRSSKVHAH-DEDNRAGMGDTVLV 64
Query: 112 GQCRPLSKTVRFNVLKVIPAGSS 134
+ RP+SKT + ++ V+ +
Sbjct: 65 AESRPMSKTKSWTLVDVVETATD 87
>gi|384438870|ref|YP_005653594.1| 30S ribosomal protein S17 [Thermus sp. CCB_US3_UF1]
gi|359290003|gb|AEV15520.1| 30S ribosomal protein S17 [Thermus sp. CCB_US3_UF1]
Length = 105
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
++L G S KM +T+ +V R + H + Y + KR AH P R K GD V I
Sbjct: 4 KVLTGVVVSDKMQKTVTVLVERQFPHPL--YGKVIKRSKKYLAH-DPEERYKVGDVVEII 60
Query: 113 QCRPLSKTVRFNVLKVIPAG 132
+ RP+SK RF VL+++ G
Sbjct: 61 ESRPISKRKRFRVLRLVEGG 80
>gi|427429411|ref|ZP_18919446.1| SSU ribosomal protein S17p (S11e) [Caenispirillum salinarum AK4]
gi|425880604|gb|EKV29300.1| SSU ribosomal protein S17p (S11e) [Caenispirillum salinarum AK4]
Length = 79
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
RIL G S K ++T+ +V R ++H V Y+++ +R AH + K GD V I
Sbjct: 4 RILQGVVTSDKTDKTVTVVVERRFMHPV--YKKFIRRTKKYAAH-DEANQCKVGDVVRIR 60
Query: 113 QCRPLSKTVRFNVL 126
+CRPLSKT + V+
Sbjct: 61 ECRPLSKTKSWEVV 74
>gi|300870638|ref|YP_003785509.1| 30S ribosomal protein S17 [Brachyspira pilosicoli 95/1000]
gi|404475014|ref|YP_006706445.1| 30S ribosomal protein S15 [Brachyspira pilosicoli B2904]
gi|431808534|ref|YP_007235432.1| 30S ribosomal protein S17 [Brachyspira pilosicoli P43/6/78]
gi|434383113|ref|YP_006704896.1| 30S ribosomal protein S17 [Brachyspira pilosicoli WesB]
gi|300688337|gb|ADK31008.1| 30S ribosomal protein S17 [Brachyspira pilosicoli 95/1000]
gi|404431762|emb|CCG57808.1| 30S ribosomal protein S17 [Brachyspira pilosicoli WesB]
gi|404436503|gb|AFR69697.1| 30S ribosomal protein S15 [Brachyspira pilosicoli B2904]
gi|430781893|gb|AGA67177.1| 30S ribosomal protein S17 [Brachyspira pilosicoli P43/6/78]
Length = 120
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 15/82 (18%)
Query: 55 RILAGTCHSAKMNRTIIVRRN-------YLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
R+L G S KM++TI+V+ Y + K +RY K H + CF EGD
Sbjct: 10 RVLEGIVVSDKMDKTIVVKVESKQKHPLYGKTISKNKRY-KAHD----EKNECF---EGD 61
Query: 108 HVIIGQCRPLSKTVRFNVLKVI 129
V I +CRP+SK +F ++K++
Sbjct: 62 LVRIIECRPISKDKKFRLVKIV 83
>gi|383937195|ref|ZP_09990602.1| small subunit ribosomal protein S17 [Rheinheimera nanhaiensis
E407-8]
gi|383701738|dbj|GAB60693.1| small subunit ribosomal protein S17 [Rheinheimera nanhaiensis
E407-8]
Length = 84
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 55 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G S KM+++I V R+ H + Y ++ KR + + H + KEGD V I
Sbjct: 7 RTLQGKVISNKMDKSITVAIERSVKHPI--YGKFIKRTTKLHVH-DENNQCKEGDVVTIR 63
Query: 113 QCRPLSKTVRFNVLKVIPAGS 133
+CRPLSKT + ++ V+ + S
Sbjct: 64 ECRPLSKTKSWTLVAVVESAS 84
>gi|83814516|ref|YP_445176.1| 30S ribosomal protein S17 [Salinibacter ruber DSM 13855]
gi|294507060|ref|YP_003571118.1| 30S ribosomal protein S17 [Salinibacter ruber M8]
gi|94730543|sp|Q2S3Q5.1|RS17_SALRD RecName: Full=30S ribosomal protein S17
gi|83755910|gb|ABC44023.1| 30S ribosomal protein S17 [Salinibacter ruber DSM 13855]
gi|294343388|emb|CBH24166.1| 30S ribosomal protein S17 [Salinibacter ruber M8]
Length = 102
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 37 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIP 94
T+ D++ + RI G SAKM++TI V RR H + Y +Y +R S
Sbjct: 9 DTHTDEQDEAVDRNDRKERI--GVVESAKMDKTITVSVRRQMKHPM--YGKYLERSSTFM 64
Query: 95 AHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIP 130
AH EGD V I + RP+SK R+ ++++I
Sbjct: 65 AH-DEGDEANEGDTVRIMETRPISKNKRWRLVEIIE 99
>gi|254449323|ref|ZP_05062768.1| ribosomal protein S17 [gamma proteobacterium HTCC5015]
gi|198261082|gb|EDY85382.1| ribosomal protein S17 [gamma proteobacterium HTCC5015]
Length = 92
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 9/69 (13%)
Query: 55 RILAGTCHSAKMNR--TIIVRRNYLHFVKKYQRYEKRHSNIPAH--ISPCFRVKEGDHVI 110
R L GT S KM++ T++V R H + Y +Y KR + I H + C R GD V+
Sbjct: 13 RTLTGTVVSDKMDKSITVLVERFVRHPI--YGKYIKRSTKIAVHDEANECGR---GDTVV 67
Query: 111 IGQCRPLSK 119
I QCRP+SK
Sbjct: 68 IEQCRPISK 76
>gi|159488919|ref|XP_001702448.1| plastid ribosomal protein S17 [Chlamydomonas reinhardtii]
gi|158271116|gb|EDO96943.1| plastid ribosomal protein S17 [Chlamydomonas reinhardtii]
Length = 105
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 59 GTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHI-SPCFRVKEGDHVIIGQCRPL 117
G S KMN+T++V L YQ+ +K AH S RV GD V + RPL
Sbjct: 32 GVVVSTKMNKTVVVEAERLATDVTYQKRKKVTKRYMAHDESGALRV--GDFVRLDGTRPL 89
Query: 118 SKTVRFNVLKVI 129
SKT RF+V +V+
Sbjct: 90 SKTKRFSVTEVL 101
>gi|389795104|ref|ZP_10198239.1| 30S ribosomal protein S17 [Rhodanobacter fulvus Jip2]
gi|388431237|gb|EIL88321.1| 30S ribosomal protein S17 [Rhodanobacter fulvus Jip2]
Length = 93
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 53 RGRILAGTCHSAKMNRTI--IVRRNYLHFV--KKYQRYEKRHSNIPAHISPCFRVKEGDH 108
+ R L G S KMN+T+ +V R H++ K +R K H+ EGD
Sbjct: 14 QARTLEGRVTSNKMNKTVTVLVERQVQHWLLGKIIRRSTKLHA------QDDLGANEGDL 67
Query: 109 VIIGQCRPLSKTVRFNVLKVIPAGS 133
V I +CRPLSKT V+++I S
Sbjct: 68 VRIAECRPLSKTKHHRVVEIITRAS 92
>gi|163796910|ref|ZP_02190867.1| 50S ribosomal protein L5 [alpha proteobacterium BAL199]
gi|159177899|gb|EDP62448.1| 50S ribosomal protein L5 [alpha proteobacterium BAL199]
Length = 83
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 114
R+L GT S K ++T++V Y+++ R + AH P R K+GD V + +C
Sbjct: 4 RVLQGTVVSDKADKTVVVTVQRRVMHPLYKKFITRTKKLAAH-DPENRFKQGDMVRVREC 62
Query: 115 RPLSKTVRFNVL 126
RP+SK+ RF VL
Sbjct: 63 RPVSKSKRFEVL 74
>gi|156743939|ref|YP_001434068.1| 30S ribosomal protein S17 [Roseiflexus castenholzii DSM 13941]
gi|189029647|sp|A7NR54.1|RS17_ROSCS RecName: Full=30S ribosomal protein S17
gi|156235267|gb|ABU60050.1| ribosomal protein S17 [Roseiflexus castenholzii DSM 13941]
Length = 86
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 58 AGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPL 117
G S KM +T++V +YL Y++ +R S AH ++ GD V IG+ RPL
Sbjct: 11 VGRVVSNKMQKTVVVAVDYLKPHPLYRKIVRRTSKFHAHDEQQCQI--GDVVRIGETRPL 68
Query: 118 SKTVRFNVLKVI 129
SKT R+ V+++I
Sbjct: 69 SKTKRWEVVEII 80
>gi|242278667|ref|YP_002990796.1| 30S ribosomal protein S17 [Desulfovibrio salexigens DSM 2638]
gi|259494776|sp|C6C194.1|RS17_DESAD RecName: Full=30S ribosomal protein S17
gi|242121561|gb|ACS79257.1| ribosomal protein S17 [Desulfovibrio salexigens DSM 2638]
Length = 88
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 114
R+L G S K ++TI+VR L Y++Y +RH+ AH P GD V I +
Sbjct: 11 RVLTGVVVSDKADKTIVVRCETLVKHSLYKKYIRRHTKFMAH-DPSNECGIGDKVQIVEF 69
Query: 115 RPLSKTVRFNVLKVI 129
RPLS+ R+++ K++
Sbjct: 70 RPLSRRKRWHLDKIL 84
>gi|357406666|ref|YP_004918590.1| 30S ribosomal protein S17 [Methylomicrobium alcaliphilum 20Z]
gi|351719331|emb|CCE25007.1| 30S ribosomal subunit protein S17 [Methylomicrobium alcaliphilum
20Z]
Length = 87
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 55 RILAGTCHSAKMNR--TIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L+G S KM++ T++V R H V Y +Y KR + + AH + EGD V I
Sbjct: 9 RTLSGRVISNKMDKSITVLVERFVKHPV--YGKYIKRSTKLMAH-DEQNQCNEGDVVSIT 65
Query: 113 QCRPLSKTVRFNVLKVIPAGS 133
CRP+SK F +++V+ + +
Sbjct: 66 SCRPMSKNKTFRLVEVVESNN 86
>gi|269837075|ref|YP_003319303.1| 30S ribosomal protein S17 [Sphaerobacter thermophilus DSM 20745]
gi|269786338|gb|ACZ38481.1| ribosomal protein S17 [Sphaerobacter thermophilus DSM 20745]
Length = 95
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 58 AGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPL 117
G S KM++T++V +YL Y++ +R S AH R K GD V+I + RPL
Sbjct: 19 VGRVVSDKMDKTVVVSVDYLRRHPLYRKTIRRTSKFKAH-DEHNRCKVGDLVLIEETRPL 77
Query: 118 SKTVRFNVLKVI 129
SKT R+ V +++
Sbjct: 78 SKTKRWIVREIL 89
>gi|55981652|ref|YP_144949.1| 30S ribosomal protein S17 [Thermus thermophilus HB8]
gi|62900934|sp|Q5SHP7.3|RS17_THET8 RecName: Full=30S ribosomal protein S17
gi|116668213|pdb|2J00|Q Chain Q, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 1 Of 4).
This File Contains The 30s Subunit, Mrna, A-, P- And
E-Site Trnas And Paromomycin For Molecule I.
gi|116668274|pdb|2J02|Q Chain Q, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 3 Of 4)
This File Contains The 30s Subunit, Mrna, A-, P- And
E-Site Trnas And Paromomycin For Molecule Ii.
gi|149243634|pdb|2UU9|Q Chain Q, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-asl With Cmo5u In
Position 34 Bound To An Mrna With A Gug-codon In The
A-site And Paromomycin.
gi|149243661|pdb|2UUA|Q Chain Q, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Guc-Codon In The
A-Site And Paromomycin.
gi|149243688|pdb|2UUB|Q Chain Q, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Guu-Codon In The
A-Site And Paromomycin.
gi|149243715|pdb|2UUC|Q Chain Q, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-asl With Cmo5u In
Position 34 Bound To An Mrna With A Gua-codon In The
A-site And Paromomycin.
gi|157836501|pdb|2V46|Q Chain Q, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
Trna-Fmet (Part 1 Of 4). This File Contains The 30s
Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
Molecule 1.
gi|157836557|pdb|2V48|Q Chain Q, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
Trna-Fmet (Part 3 Of 4). This File Contains The 30s
Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
Molecule 2.
gi|226887390|pdb|2WDG|Q Chain Q, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 30s Subunit A-,P-, And E-Site Trnas And
Paromomycin For Molecule I.
gi|226887415|pdb|2WDH|Q Chain Q, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 30s Subunit A-,P-, And E-Site Trnas And
Paromomycin For Molecule Ii.
gi|226887504|pdb|2WDK|Q Chain Q, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 30s
Subunit A-,P-, And E-Site Trnas And Paromomycin For
Molecule I.
gi|226887561|pdb|2WDM|Q Chain Q, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 30s
Subunit A-,P-, And E-Site Trnas And Paromomycin For
Molecule Ii.
gi|237823545|pdb|2WH1|Q Chain Q, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome
gi|237823604|pdb|2WH3|Q Chain Q, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome). This File Contains The
30s Subunit.
gi|260100002|pdb|3HUW|Q Chain Q, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For
Molecule I.
gi|260100058|pdb|3HUY|Q Chain Q, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For
Molecule Ii.
gi|261824500|pdb|2WRI|Q Chain Q, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State (Part 1 Of 4).
gi|261824562|pdb|2WRK|Q Chain Q, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State (Part 3 Of 4).
gi|261824624|pdb|2WRN|Q Chain Q, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 1 Of 4).
gi|261824683|pdb|2WRQ|Q Chain Q, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 3 Of 4).
gi|281307183|pdb|3KIQ|QQ Chain q, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 1 Of 4)
gi|281307241|pdb|3KIS|QQ Chain q, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 3 Of 4)
gi|281307299|pdb|3KIU|QQ Chain q, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 1 Of 4)
gi|281307357|pdb|3KIX|QQ Chain q, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 3 Of 4)
gi|288965620|pdb|3KNH|Q Chain Q, The Structures Of Viomycin Bound To The 70s Ribosome. This
File Contains The 30s Subunit For Molecule I
gi|289526698|pdb|3KNJ|Q Chain Q, The Structures Of Viomycin Bound To The 70s Ribosome. This
File Contains The 30s Subunit For Molecule Ii'
gi|289526723|pdb|3KNL|Q Chain Q, The Structures Of Capreomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule I
gi|289526748|pdb|3KNN|Q Chain Q, The Structures Of Capreomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule Ii
gi|294979520|pdb|3I8G|T Chain T, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8g Contains 30s Ribosomal Subnit.The 50s
Ribosomal Can Be Found In Pdb Entry 3i8f. Molecule B In
The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f
(50s).
gi|294979545|pdb|3I8H|T Chain T, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8h Contains 30s Ribosomal Subnit. The 50s
Ribosomal Can Be Found In Pdb Entry 3i8i. Molecule A In
The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g
(30s).
gi|294979604|pdb|3I9B|T Chain T, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9b Contains 30s Ribosomal Subunit Of Molecule B.
The 50s Subunit Can Be Found In Pdb Entry 3i9c. Molecule
A In The S Asymmetric Unit Is Deposited As 3i9d (30s)
And 3i9e (50s)
gi|294979658|pdb|3I9D|T Chain T, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9d Contains 30s Ribosomal Subunit Of Molecule A.
The 50s Subunit Can Be Found In Pdb Entry 3i9e. Molecule
B In The S Asymmetric Unit Is Deposited As 3i9b (30s)
And 3i9c (50s)
gi|295982091|pdb|2X9R|Q Chain Q, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|295982150|pdb|2X9T|Q Chain Q, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|307567978|pdb|2XFZ|Q Chain Q, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 1 Of 4)
gi|307568036|pdb|2XG1|Q Chain Q, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 3 Of 4)
gi|309320251|pdb|3OGE|Q Chain Q, Structure Of The Thermus Thermophilus Ribosome Complexed
With Chloramphenicol. This File Contains The 30s Subunit
Of One 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|309320272|pdb|3OGY|Q Chain Q, Structure Of The Thermus Thermophilus Ribosome Complexed
With Chloramphenicol. This File Contains The 30s Subunit
Of One 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|309320353|pdb|3OHC|Q Chain Q, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 30s Subunit Of
One 70s Ribosome. The Entire Crystal Structure Contains
Two 70s Ribosomes.
gi|309320374|pdb|3OHD|Q Chain Q, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 30s Subunit Of
One 70s Ribosome. The Entire Crystal Structure Contains
Two 70s Ribosomes.
gi|309320455|pdb|3OHY|Q Chain Q, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320506|pdb|3OI0|Q Chain Q, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320557|pdb|3OI2|Q Chain Q, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320608|pdb|3OI4|Q Chain Q, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|312207689|pdb|2XQD|Q Chain Q, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s
Ribosome With A Gtp Analog
gi|313754015|pdb|2XSY|Q Chain Q, Trna Tranlocation On The 70s Ribosome: The Pre-
Translocational Translocation Intermediate Ti(Pre)
gi|313754130|pdb|2XUY|Q Chain Q, Trna Translocation On The 70s Ribosome: The Post-
Translocational Translocation Intermediate Ti(Post)
gi|325533418|pdb|2Y0U|Q Chain Q, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
Near-Cognate Codon On The 70s Ribosome
gi|325533477|pdb|2Y0W|Q Chain Q, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
Near-Cognate Codon On The 70s Ribosome
gi|325533536|pdb|2Y0Y|Q Chain Q, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533595|pdb|2Y10|Q Chain Q, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
Cognate Codon On The 70s Ribosome.
gi|325533654|pdb|2Y12|Q Chain Q, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533713|pdb|2Y14|Q Chain Q, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Cognate Codon On The 70s Ribosome.
gi|325533772|pdb|2Y16|Q Chain Q, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Cognate Codon On The 70s Ribosome.
gi|325533831|pdb|2Y18|Q Chain Q, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
Cognate Codon On The 70s Ribosome.
gi|347948811|pdb|3ZVO|Q Chain Q, Crystal Structure Of The Hybrid State Of Ribosome In
Complex With The Guanosine Triphosphatase Release Factor
3
gi|374074521|pdb|3UXS|Q Chain Q, The Structure Of Thermorubin In Complex With The 70s
Ribosome From Thermus Thermophilus. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|374074542|pdb|3UXT|Q Chain Q, The Structure Of Thermorubin In Complex With The 70s
Ribosome From Thermus Thermophilus. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.'
gi|380764258|pdb|3TVF|T Chain T, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Leu Complex
gi|380764283|pdb|3TVG|T Chain T, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Leu Complex
gi|380764360|pdb|3UYD|T Chain T, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex
gi|380764416|pdb|3UYF|T Chain T, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex
gi|380764536|pdb|3UZ3|T Chain T, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex With Paromomycin.
gi|380764561|pdb|3UZ4|T Chain T, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex With Paromomycin.
gi|380764587|pdb|3UZ6|T Chain T, Structure Analysis Of Ribosomal Decoding. This Entry
Contains The 30s Ribosomal Subunit Of The First 70s
Molecule In The Asymmetric Unit For The Cognate Trna-Tyr
Complex
gi|380764613|pdb|3UZ7|T Chain T, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Tyr Complex.
gi|380764733|pdb|3UZG|T Chain T, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Tyr Complex
gi|380764789|pdb|3UZI|T Chain T, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Tyr Complex
gi|380764844|pdb|3UZL|T Chain T, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Tyr Complex With Paromomycin
gi|380764870|pdb|3UZM|T Chain T, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Near-cognate
Trna-tyr Complex With Paromomycin
gi|381353104|pdb|4ABR|Q Chain Q, Complex Of Smpb, A Tmrna Fragment And Ef-Tu-Gdp-Kirromycin
With The 70s Ribosome
gi|381353208|pdb|4DH9|Q Chain Q, Crystal Structure Of Yaej Bound To The 70s Ribosome
gi|381353263|pdb|4DHB|Q Chain Q, Crystal Structure Of Yaej Bound To The 70s Ribosome
gi|388325959|pdb|3V22|Q Chain Q, Crystal Structure Of Rmf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Rmf Of The 1st Ribosome In The Asu
gi|388326012|pdb|3V24|Q Chain Q, Crystal Structure Of Rmf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Rmf Of The 2nd Ribosome In The Asu
gi|388326065|pdb|3V26|Q Chain Q, Crystal Structure Of Hpf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Hpf Of The 1st Ribosome In The Asu
gi|388326118|pdb|3V28|Q Chain Q, Crystal Structure Of Hpf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Hpf Of The 2nd Ribosome In The Asu
gi|388326241|pdb|3V2C|Q Chain Q, Crystal Structure Of Yfia Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Yfia Of The 1st Ribosome In The Asu
gi|388326294|pdb|3V2E|Q Chain Q, Crystal Structure Of Yfia Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Yfia Of The 2nd Ribosome In The Asu
gi|451928705|pdb|4G5K|T Chain T, Crystal Structure Of The 70s Ribosome With Tetracycline.
This Entry Contains The 30s Subunit Of Molecule A.
gi|451928758|pdb|4G5M|T Chain T, Crystal Structure Of The 70s Ribosome With Tetracycline.
This Entry Contains The 30s Subunit Of Molecule B.
gi|451928811|pdb|4G5T|T Chain T, Crystal Structure Of The 70s Ribosome With Tigecycline.
This Entry Contains The 30s Subunit Of Molecule A.
gi|451928865|pdb|4G5V|T Chain T, Crystal Structure Of The 70s Ribosome With Tigecycline.
This Entry Contains The 30s Subunit Of Molecule B.
gi|55773065|dbj|BAD71506.1| 30S ribosomal protein S17 [Thermus thermophilus HB8]
Length = 105
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
++L G S KM +T+ +V R + H + Y + KR AH P + K GD V I
Sbjct: 4 KVLTGVVVSDKMQKTVTVLVERQFPHPL--YGKVIKRSKKYLAH-DPEEKYKLGDVVEII 60
Query: 113 QCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ RP+SK RF VL+++ +G +K
Sbjct: 61 ESRPISKRKRFRVLRLVESGRMDLVEKYL 89
>gi|46199621|ref|YP_005288.1| 30S ribosomal protein S17 [Thermus thermophilus HB27]
gi|386359812|ref|YP_006058057.1| 30S ribosomal protein S17 [Thermus thermophilus JL-18]
gi|50401371|sp|P62658.2|RS17_THET2 RecName: Full=30S ribosomal protein S17
gi|62906862|sp|P24321.4|RS17_THETH RecName: Full=30S ribosomal protein S17
gi|10835601|pdb|1FJG|Q Chain Q, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With The Antibiotics Streptomycin,
Spectinomycin, And Paromomycin
gi|13096410|pdb|1HR0|Q Chain Q, Crystal Structure Of Initiation Factor If1 Bound To The
30s Ribosomal Subunit
gi|13399808|pdb|1HNW|Q Chain Q, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Tetracycline
gi|13399830|pdb|1HNX|Q Chain Q, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Pactamycin
gi|13399852|pdb|1HNZ|Q Chain Q, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Hygromycin B
gi|14278026|pdb|1GIX|T Chain T, Crystal Structure Of The Ribosome At 5.5 A Resolution.
This File, 1gix, Contains The 30s Ribosome Subunit,
Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is
In The File 1giy
gi|14278072|pdb|1IBK|Q Chain Q, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With The Antibiotic Paromomycin
gi|14278093|pdb|1IBL|Q Chain Q, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With A Messenger Rna Fragment And
Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
Site And With The Antibiotic Paromomycin
gi|14278117|pdb|1IBM|Q Chain Q, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With A Messenger Rna Fragment And
Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
Site
gi|15826136|pdb|1JGO|T Chain T, The Path Of Messenger Rna Through The Ribosome. This File,
1jgo, Contains The 30s Ribosome Subunit, Three Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
gi|15826161|pdb|1JGP|T Chain T, The Path Of Messenger Rna Through The Ribosome. This File,
1jgp, Contains The 30s Ribosome Subunit, Three Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
gi|15826186|pdb|1JGQ|T Chain T, The Path Of Messenger Rna Through The Ribosome. This File,
1jgq, Contains The 30s Ribosome Subunit, Three Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
gi|28373715|pdb|1ML5|T Chain T, Structure Of The E. Coli Ribosomal Termination Complex
With Release Factor 2
gi|58177416|pdb|1XMO|Q Chain Q, Crystal Structure Of Mnm5u34t6a37-Trnalysuuu Complexed
With Aag-Mrna In The Decoding Center
gi|58177439|pdb|1XMQ|Q Chain Q, Crystal Structure Of T6a37-Asllysuuu Aaa-Mrna Bound To The
Decoding Center
gi|58177480|pdb|1XNQ|Q Chain Q, Structure Of An Inosine-Adenine Wobble Base Pair Complex
In The Context Of The Decoding Center
gi|58177503|pdb|1XNR|Q Chain Q, Crystal Structure Of An Inosine-Cytosine Wobble Base Pair
In The Context Of The Decoding Center
gi|66361070|pdb|1YL4|T Chain T, Crystal Structure Of 70s Ribosome With Thrs Operator And
Trnas. 30s Subunit. The Coordinates For The 50s Subunit
Are In The Pdb Entry 1yl3
gi|88192252|pdb|2B64|Q Chain Q, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf1
From A Crystal Structure Of The Whole Ribosomal Complex.
This File Contains The 30s Subunit, Trnas, Mrna And
Release Factor Rf1 From A Crystal Structure Of The Whole
Ribosomal Complex". The Entire Crystal Structure
Contains One 70s Ribosome, Trnas, Mrna And Release
Factor Rf1 And Is Described In Remark 400.
gi|88192315|pdb|2B9M|Q Chain Q, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2
From A Crystal Structure Of The Whole Ribosomal Complex.
This File Contains The 30s Ribosomal Subunit, Trnas,
Mrna And Release Factor Rf2 From A Crystal Structure Of
The Whole Ribosomal Complex". The Entire Crystal
Structure Contains One 70s Ribosome, Trnas, Mrna And
Release Factor Rf2 And Is Described In Remark 400.
gi|88192371|pdb|2B9O|Q Chain Q, 30s Ribosomal Subunit, Trnas And Mrna From A Crystal
Structure Of The Whole Ribosomal Complex With A Stop
Codon In The A-Site. This File Contains The 30s Subunit,
Trnas And Mrna From A Crystal Structure Of The Whole
Ribosomal Complex With A Stop Codon In The A-Site And Is
Described In Remark 400.
gi|110591339|pdb|2F4V|Q Chain Q, 30s Ribosome + Designer Antibiotic
gi|116667670|pdb|2HHH|Q Chain Q, Crystal Structure Of Kasugamycin Bound To The 30s
Ribosomal Subunit
gi|119389728|pdb|2HGI|T Chain T, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
Showing How The 16s 3'-End Mimicks Mrna E And P Codons.
This Entry 2hgi Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 2hgj.
gi|119389785|pdb|2HGP|T Chain T, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
With Translocated And Rotated Shine-Dalgarno Duplex.
This Entry 2hgp Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 2hgq.
gi|119389841|pdb|2HGR|T Chain T, 70s T.Th. Ribosome Functional Complex With Mrna And E- And
P-Site Trnas At 4.5a. This Entry 2hgr Contains 30s
Ribosomal Subunit. The 50s Ribosomal Subunit Can Be
Found In Pdb Entry 2hgu.
gi|149242724|pdb|2OW8|RR Chain r, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals
Functional Interactions And Rearrangements. This File,
2ow8, Contains The 30s Ribosome Subunit, Two Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File
1vsa.
gi|149243854|pdb|2UXC|Q Chain Q, Crystal Structure Of An Extended Trna Anticodon Stem Loop
In Complex With Its Cognate Mrna Ucgu In The Context Of
The Thermus Thermophilus 30s Subunit.
gi|157836424|pdb|2UXB|Q Chain Q, Crystal Structure Of An Extended Trna Anticodon Stem Loop
In Complex With Its Cognate Mrna Gggu In The Context Of
The Thermus Thermophilus 30s Subunit.
gi|158430916|pdb|2UXD|Q Chain Q, Crystal Structure Of An Extended Trna Anticodon Stem Loop
In Complex With Its Cognate Mrna Cggg In The Context Of
The Thermus Thermophilus 30s Subunit.
gi|160285955|pdb|2QNH|RR Chain r, Interactions And Dynamics Of The Shine-Dalgarno Helix In
The 70s Ribosome. This File, 2qnh, Contains The 30s
Ribosome Subunit, Two Trna, And Mrna Molecules. 50s
Ribosome Subunit Is In The File 1vsp.
gi|186972865|pdb|2VQE|Q Chain Q, Modified Uridines With C5-methylene Substituents At The
First Position Of The Trna Anticodon Stabilize U-g
Wobble Pairing During Decoding
gi|186972888|pdb|2VQF|Q Chain Q, Modified Uridines With C5-Methylene Substituents At The
First Position Of The Trna Anticodon Stabilize U-G
Wobble Pairing During Decoding
gi|209156512|pdb|3D5A|Q Chain Q, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 30s Subunit, Release
Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s
Ribosome. The Entire Crystal Structure Contains Two 70s
Ribosomes As Described In Remark 400.
gi|209156568|pdb|3D5C|Q Chain Q, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 30s Subunit, Release
Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes As Described In Remark 400.
gi|218766789|pdb|3F1E|Q Chain Q, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One
70s Ribosome. The Entire Crystal Structure Contains Two
70s Ribosomes As Described In Remark 400.
gi|218766845|pdb|3F1G|Q Chain Q, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes As Described In Remark 400.
gi|307776628|pdb|3OTO|Q Chain Q, Crystal Structure Of The 30s Ribosomal Subunit From A Ksga
Mutant Of Thermus Thermophilus (Hb8)
gi|374074279|pdb|3T1H|Q Chain Q, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Human Anti-Codon Stem Loop
(Hasl) Of Transfer Rna Lysine 3 (Trnalys3) Bound To An
Mrna With An Aaa-Codon In The A-Site And Paromomycin
gi|374074304|pdb|3T1Y|Q Chain Q, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Human Anti-Codon Stem Loop
(Hasl) Of Transfer Rna Lysine 3 (Trnalys3) Bound To An
Mrna With An Aag-Codon In The A-Site And Paromomycin
gi|414145523|pdb|4DR1|Q Chain Q, Crystal Structure Of The Apo 30s Ribosomal Subunit From
Thermus Thermophilus (hb8)
gi|414145544|pdb|4DR2|Q Chain Q, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Multiple Copies Of Paromomycin
Molecules Bound
gi|414145565|pdb|4DR3|Q Chain Q, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Streptomycin Bound
gi|414145586|pdb|4DR4|Q Chain Q, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Codon, Cognate Transfer Rna
Anticodon Stem-loop And Multiple Copies Of Paromomycin
Molecules Bound
gi|414145609|pdb|4DR5|Q Chain Q, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Codon, Crystallographically
Disordered Cognate Transfer Rna Anticodon Stem-loop And
Streptomycin Bound
gi|414145632|pdb|4DR6|Q Chain Q, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Codon, Near-cognate Transfer Rna
Anticodon Stem-loop Mismatched At The First Codon
Position And Streptomycin Bound
gi|414145657|pdb|4DR7|Q Chain Q, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Codon, Crystallographically
Disordered Near-cognate Transfer Rna Anticodon Stem-loop
Mismatched At The Second Codon Position, And
Streptomycin Bound
gi|453055765|pdb|4DUY|Q Chain Q, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, U13c
gi|453055786|pdb|4DUZ|Q Chain Q, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, U13c, Bound
With Streptomycin
gi|453055807|pdb|4DV0|Q Chain Q, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, U20g
gi|453055828|pdb|4DV1|Q Chain Q, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, U20g, Bound
With Streptomycin
gi|453055849|pdb|4DV2|Q Chain Q, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, C912a
gi|453055870|pdb|4DV3|Q Chain Q, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, C912a, Bound
With Streptomycin
gi|453055891|pdb|4DV4|Q Chain Q, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, A914g
gi|453055912|pdb|4DV5|Q Chain Q, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, A914g, Bound
With Streptomycin
gi|453055933|pdb|4DV6|Q Chain Q, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, A915g
gi|453055954|pdb|4DV7|Q Chain Q, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, A915g, Bound
With Streptomycin
gi|673503|emb|CAA85419.1| ribosomal protein S17 [Thermus thermophilus]
gi|46197247|gb|AAS81661.1| SSU ribosomal protein S17P [Thermus thermophilus HB27]
gi|383508839|gb|AFH38271.1| 30S ribosomal protein S17 [Thermus thermophilus JL-18]
Length = 105
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
++L G S KM +T+ +V R + H + Y + KR AH P + K GD V I
Sbjct: 4 KVLTGVVVSDKMQKTVTVLVERQFPHPL--YGKVIKRSKKYLAH-DPEEKYKLGDVVEII 60
Query: 113 QCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ RP+SK RF VL+++ +G +K
Sbjct: 61 ESRPISKRKRFRVLRLVESGRMDLVEKYL 89
>gi|381191142|ref|ZP_09898653.1| 30S ribosomal protein S17 [Thermus sp. RL]
gi|384431863|ref|YP_005641223.1| 30S ribosomal protein S17 [Thermus thermophilus SG0.5JP17-16]
gi|333967331|gb|AEG34096.1| 30S ribosomal protein S17 [Thermus thermophilus SG0.5JP17-16]
gi|380450931|gb|EIA38544.1| 30S ribosomal protein S17 [Thermus sp. RL]
Length = 105
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
++L G S KM +T+ +V R + H + Y + KR AH P + K GD V I
Sbjct: 4 KVLTGVVVSDKMQKTVTVLVERQFPHPL--YGKVIKRSKKYLAH-DPEEKYKLGDVVEII 60
Query: 113 QCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ RP+SK RF VL+++ +G +K
Sbjct: 61 ESRPISKRKRFRVLRLVESGRMDLVEKYL 89
>gi|406942223|gb|EKD74512.1| 30S ribosomal protein S17 [uncultured bacterium]
Length = 90
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 54 GRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQ 113
R G S KM++TI+V L KY +Y +R S AH + +EGD V+I +
Sbjct: 9 ARTAVGHVVSNKMDKTIVVTIERLVKHPKYGKYIRRISRRFAH-DETNQSQEGDVVLIKE 67
Query: 114 CRPLSKTVRFNVLKVIPAGS 133
CRPLS+ + +++V+ S
Sbjct: 68 CRPLSRNKSWTLVQVLENAS 87
>gi|92112563|ref|YP_572491.1| 30S ribosomal protein S17 [Chromohalobacter salexigens DSM 3043]
gi|118573038|sp|Q1R0G6.1|RS17_CHRSD RecName: Full=30S ribosomal protein S17
gi|91795653|gb|ABE57792.1| SSU ribosomal protein S17P [Chromohalobacter salexigens DSM 3043]
Length = 86
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 54 GRILAGTCHSAKMNRTIIVR--RNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVII 111
R L G S KM+++++V+ R H + Y +Y KR + + AH + + GD V I
Sbjct: 7 ARTLTGKVVSDKMDKSVVVQIERRVRHPI--YDKYVKRSTKLHAH-DEANQARVGDTVSI 63
Query: 112 GQCRPLSKTVRFNVLKVI 129
+CRP+SK + +++V+
Sbjct: 64 EECRPISKLKAWTLVEVV 81
>gi|39997940|ref|NP_953891.1| 30S ribosomal protein S17 [Geobacter sulfurreducens PCA]
gi|409913293|ref|YP_006891758.1| 30S ribosomal protein S17 [Geobacter sulfurreducens KN400]
gi|81831969|sp|Q748Z7.1|RS17_GEOSL RecName: Full=30S ribosomal protein S17
gi|39984885|gb|AAR36241.1| ribosomal protein S17 [Geobacter sulfurreducens PCA]
gi|298506879|gb|ADI85602.1| ribosomal protein S17 [Geobacter sulfurreducens KN400]
Length = 85
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 58 AGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISP--CFRVKEGDHVIIGQCR 115
G S KM++T++VR ++L Y +Y KR AH + C K GD V+I + R
Sbjct: 11 VGVVVSDKMDKTVVVRVSHLVKHPVYNKYIKRSVKYKAHDTDNSC---KTGDRVLIVETR 67
Query: 116 PLSKTVRFNVLKVIP 130
PLSK R+ V ++I
Sbjct: 68 PLSKDKRWKVRQIID 82
>gi|20663902|pdb|1J5E|Q Chain Q, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit
gi|27065892|pdb|1N32|Q Chain Q, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Bound To Codon And Near-Cognate Transfer Rna
Anticodon Stem-Loop Mismatched At The First Codon
Position At The A Site With Paromomycin
gi|27065919|pdb|1N33|Q Chain Q, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Bound To Codon And Near-Cognate Transfer Rna
Anticodon Stem-Loop Mismatched At The Second Codon
Position At The A Site With Paromomycin
gi|27065946|pdb|1N34|Q Chain Q, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In The Presence Of Codon And
Crystallographically Disordered Near-Cognate Transfer
Rna Anticodon Stem-Loop Mismatched At The First Codon
Position
gi|27065972|pdb|1N36|Q Chain Q, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In The Presence Of Crystallographically
Disordered Codon And Near-cognate Transfer Rna Anticodon
Stem-loop Mismatched At The Second Codon Position
gi|34811545|pdb|1PNS|Q Chain Q, Crystal Structure Of A Streptomycin Dependent Ribosome
From E. Coli, 30s Subunit Of 70s Ribosome. This File,
1pns, Contains The 30s Subunit, Two Trnas, And One Mrna
Molecule. The 50s Ribosomal Subunit Is In File 1pnu.
gi|34811601|pdb|1PNX|Q Chain Q, Crystal Structure Of The Wild Type Ribosome From E. Coli,
30s Subunit Of 70s Ribosome. This File, 1pnx, Contains
Only Molecules Of The 30s Ribosomal Subunit. The 50s
Subunit Is In The Pdb File 1pny.
gi|56966339|pdb|1VOQ|Q Chain Q, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966392|pdb|1VOS|Q Chain Q, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966445|pdb|1VOV|Q Chain Q, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966498|pdb|1VOX|Q Chain Q, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966551|pdb|1VOZ|Q Chain Q, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|149241291|pdb|2E5L|Q Chain Q, A Snapshot Of The 30s Ribosomal Subunit Capturing Mrna Via
The Shine- Dalgarno Interaction
gi|226887645|pdb|2ZM6|Q Chain Q, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit
gi|395759350|pdb|4AQY|Q Chain Q, Structure Of Ribosome-Apramycin Complexes
Length = 104
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
++L G S KM +T+ +V R + H + Y + KR AH P + K GD V I
Sbjct: 3 KVLTGVVVSDKMQKTVTVLVERQFPHPL--YGKVIKRSKKYLAH-DPEEKYKLGDVVEII 59
Query: 113 QCRPLSKTVRFNVLKVIPAG 132
+ RP+SK RF VL+++ +G
Sbjct: 60 ESRPISKRKRFRVLRLVESG 79
>gi|300508621|pdb|3MR8|Q Chain Q, Recognition Of The Amber Stop Codon By Release Factor Rf1.
This Entry 3mr8 Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 3ms1.
Molecule B In The Same Asymmetric Unit Is Deposited As
3mrz (50s) And 3ms0 (30s).
gi|300508676|pdb|3MS0|Q Chain Q, Recognition Of The Amber Stop Codon By Release Factor Rf1.
This Entry 3ms0 Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 3mrz.
Molecule A In The Same Asymmetric Unit Is Deposited As
3mr8 (30s) And 3ms1 (50s).
gi|322812566|pdb|3PYN|Q Chain Q, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 30s Subunit Of The First 70s Ribosome.
gi|322812619|pdb|3PYQ|Q Chain Q, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 30s Subunit Of The Second 70s
Ribosome.
gi|322812672|pdb|3PYS|Q Chain Q, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 30s Subunit Of The First 70s Ribosome.
gi|322812725|pdb|3PYU|Q Chain Q, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 30s Subunit Of The Second 70s Ribosome
Length = 99
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
++L G S KM +T+ +V R + H + Y + KR AH P + K GD V I
Sbjct: 3 KVLTGVVVSDKMQKTVTVLVERQFPHPL--YGKVIKRSKKYLAH-DPEEKYKLGDVVEII 59
Query: 113 QCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ RP+SK RF VL+++ +G +K
Sbjct: 60 ESRPISKRKRFRVLRLVESGRMDLVEKYL 88
>gi|15605248|ref|NP_220034.1| 30S ribosomal protein S17 [Chlamydia trachomatis D/UW-3/CX]
gi|76789256|ref|YP_328342.1| 30S ribosomal protein S17 [Chlamydia trachomatis A/HAR-13]
gi|166154734|ref|YP_001654852.1| 30S ribosomal protein S17 [Chlamydia trachomatis 434/Bu]
gi|166155609|ref|YP_001653864.1| 30S ribosomal protein S17 [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|237802948|ref|YP_002888142.1| 30S ribosomal protein S17 [Chlamydia trachomatis B/Jali20/OT]
gi|255311337|ref|ZP_05353907.1| 30S ribosomal protein S17 [Chlamydia trachomatis 6276]
gi|255317638|ref|ZP_05358884.1| 30S ribosomal protein S17 [Chlamydia trachomatis 6276s]
gi|255348896|ref|ZP_05380903.1| 30S ribosomal protein S17 [Chlamydia trachomatis 70]
gi|255503436|ref|ZP_05381826.1| 30S ribosomal protein S17 [Chlamydia trachomatis 70s]
gi|255507115|ref|ZP_05382754.1| 30S ribosomal protein S17 [Chlamydia trachomatis D(s)2923]
gi|301336008|ref|ZP_07224252.1| 30S ribosomal protein S17 [Chlamydia trachomatis L2tet1]
gi|339626203|ref|YP_004717682.1| 30S ribosomal protein S17 [Chlamydia trachomatis L2c]
gi|376282529|ref|YP_005156355.1| 30S ribosomal protein S17 [Chlamydia trachomatis A2497]
gi|385240047|ref|YP_005807889.1| 30S ribosomal protein S17 [Chlamydia trachomatis G/9768]
gi|385240972|ref|YP_005808813.1| 30S ribosomal protein S17 [Chlamydia trachomatis G/11222]
gi|385241901|ref|YP_005809741.1| 30S ribosomal protein S17 [Chlamydia trachomatis E/11023]
gi|385242825|ref|YP_005810664.1| 30S ribosomal protein S17 [Chlamydia trachomatis G/9301]
gi|385243726|ref|YP_005811572.1| 30S ribosomal protein S17 [Chlamydia trachomatis D-EC]
gi|385244606|ref|YP_005812450.1| 30S ribosomal protein S17 [Chlamydia trachomatis D-LC]
gi|385245508|ref|YP_005814331.1| 30S ribosomal protein S17 [Chlamydia trachomatis E/150]
gi|385246434|ref|YP_005815256.1| 30S ribosomal protein S17 [Chlamydia trachomatis G/11074]
gi|385270221|ref|YP_005813381.1| 30S ribosomal protein S17 [Chlamydia trachomatis A2497]
gi|386262876|ref|YP_005816155.1| 30S ribosomal protein S17 [Chlamydia trachomatis Sweden2]
gi|389858215|ref|YP_006360457.1| 30S ribosomal protein S17 [Chlamydia trachomatis F/SW4]
gi|389859091|ref|YP_006361332.1| 30S ribosomal protein S17 [Chlamydia trachomatis E/SW3]
gi|389859967|ref|YP_006362207.1| 30S ribosomal protein S17 [Chlamydia trachomatis F/SW5]
gi|94730507|sp|Q3KLH8.1|RS17_CHLTA RecName: Full=30S ribosomal protein S17
gi|226697957|sp|B0B893.1|RS17_CHLT2 RecName: Full=30S ribosomal protein S17
gi|226697958|sp|B0BCF8.1|RS17_CHLTB RecName: Full=30S ribosomal protein S17
gi|290463297|sp|P0CE05.1|RS17_CHLTR RecName: Full=30S ribosomal protein S17
gi|144620|gb|AAA23171.1| ribosomal protein S17e [Chlamydia trachomatis]
gi|3328956|gb|AAC68120.1| S17 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX]
gi|76167786|gb|AAX50794.1| SSU ribosomal protein S17P [Chlamydia trachomatis A/HAR-13]
gi|165930722|emb|CAP04219.1| SSU ribosomal protein S17P [Chlamydia trachomatis 434/Bu]
gi|165931597|emb|CAP07173.1| SSU ribosomal protein S17P [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|231274182|emb|CAX10976.1| SSU ribosomal protein S17P [Chlamydia trachomatis B/Jali20/OT]
gi|289525564|emb|CBJ15042.1| SSU ribosomal protein S17P [Chlamydia trachomatis Sweden2]
gi|296435124|gb|ADH17302.1| 30S ribosomal protein S17 [Chlamydia trachomatis E/150]
gi|296436052|gb|ADH18226.1| 30S ribosomal protein S17 [Chlamydia trachomatis G/9768]
gi|296436980|gb|ADH19150.1| 30S ribosomal protein S17 [Chlamydia trachomatis G/11222]
gi|296437913|gb|ADH20074.1| 30S ribosomal protein S17 [Chlamydia trachomatis G/11074]
gi|296438844|gb|ADH20997.1| 30S ribosomal protein S17 [Chlamydia trachomatis E/11023]
gi|297140413|gb|ADH97171.1| 30S ribosomal protein S17 [Chlamydia trachomatis G/9301]
gi|297748649|gb|ADI51195.1| SSU ribosomal protein S17P [Chlamydia trachomatis D-EC]
gi|297749529|gb|ADI52207.1| SSU ribosomal protein S17P [Chlamydia trachomatis D-LC]
gi|339461371|gb|AEJ77874.1| 30S ribosomal protein S17 [Chlamydia trachomatis L2c]
gi|347975361|gb|AEP35382.1| SSU ribosomal protein S17P [Chlamydia trachomatis A2497]
gi|371908559|emb|CAX09189.1| SSU ribosomal protein S17P [Chlamydia trachomatis A2497]
gi|380249287|emb|CCE14580.1| SSU ribosomal protein S17P [Chlamydia trachomatis F/SW5]
gi|380250162|emb|CCE13691.1| SSU ribosomal protein S17P [Chlamydia trachomatis F/SW4]
gi|380251040|emb|CCE12802.1| SSU ribosomal protein S17P [Chlamydia trachomatis E/SW3]
gi|438690454|emb|CCP49711.1| 30S ribosomal protein S17 [Chlamydia trachomatis A/7249]
gi|438691539|emb|CCP48813.1| 30S ribosomal protein S17 [Chlamydia trachomatis A/5291]
gi|438692912|emb|CCP47914.1| 30S ribosomal protein S17 [Chlamydia trachomatis A/363]
gi|440525443|emb|CCP50694.1| 30S ribosomal protein S17 [Chlamydia trachomatis K/SotonK1]
gi|440526330|emb|CCP51814.1| 30S ribosomal protein S17 [Chlamydia trachomatis L2b/8200/07]
gi|440527227|emb|CCP52711.1| 30S ribosomal protein S17 [Chlamydia trachomatis D/SotonD1]
gi|440528120|emb|CCP53604.1| 30S ribosomal protein S17 [Chlamydia trachomatis D/SotonD5]
gi|440529010|emb|CCP54494.1| 30S ribosomal protein S17 [Chlamydia trachomatis D/SotonD6]
gi|440529901|emb|CCP55385.1| 30S ribosomal protein S17 [Chlamydia trachomatis E/SotonE4]
gi|440530800|emb|CCP56284.1| 30S ribosomal protein S17 [Chlamydia trachomatis E/SotonE8]
gi|440531691|emb|CCP57201.1| 30S ribosomal protein S17 [Chlamydia trachomatis F/SotonF3]
gi|440532584|emb|CCP58094.1| 30S ribosomal protein S17 [Chlamydia trachomatis G/SotonG1]
gi|440533478|emb|CCP58988.1| 30S ribosomal protein S17 [Chlamydia trachomatis Ia/SotonIa1]
gi|440534372|emb|CCP59882.1| 30S ribosomal protein S17 [Chlamydia trachomatis Ia/SotonIa3]
gi|440535268|emb|CCP60778.1| 30S ribosomal protein S17 [Chlamydia trachomatis E/Bour]
gi|440536155|emb|CCP61668.1| 30S ribosomal protein S17 [Chlamydia trachomatis L2b/795]
gi|440537048|emb|CCP62562.1| 30S ribosomal protein S17 [Chlamydia trachomatis L1/440/LN]
gi|440537937|emb|CCP63451.1| 30S ribosomal protein S17 [Chlamydia trachomatis L1/1322/p2]
gi|440538827|emb|CCP64341.1| 30S ribosomal protein S17 [Chlamydia trachomatis L1/115]
gi|440539716|emb|CCP65230.1| 30S ribosomal protein S17 [Chlamydia trachomatis L1/224]
gi|440540608|emb|CCP66122.1| 30S ribosomal protein S17 [Chlamydia trachomatis L2/25667R]
gi|440541496|emb|CCP67010.1| 30S ribosomal protein S17 [Chlamydia trachomatis L3/404/LN]
gi|440542383|emb|CCP67897.1| 30S ribosomal protein S17 [Chlamydia trachomatis L2b/UCH-2]
gi|440543274|emb|CCP68788.1| 30S ribosomal protein S17 [Chlamydia trachomatis L2b/Canada2]
gi|440544165|emb|CCP69679.1| 30S ribosomal protein S17 [Chlamydia trachomatis L2b/LST]
gi|440545055|emb|CCP70569.1| 30S ribosomal protein S17 [Chlamydia trachomatis L2b/Ams1]
gi|440545945|emb|CCP71459.1| 30S ribosomal protein S17 [Chlamydia trachomatis L2b/CV204]
gi|440914207|emb|CCP90624.1| 30S ribosomal protein S17 [Chlamydia trachomatis L2b/Ams2]
gi|440915097|emb|CCP91514.1| 30S ribosomal protein S17 [Chlamydia trachomatis L2b/Ams3]
gi|440915988|emb|CCP92405.1| 30S ribosomal protein S17 [Chlamydia trachomatis L2b/Canada1]
gi|440916883|emb|CCP93300.1| 30S ribosomal protein S17 [Chlamydia trachomatis L2b/Ams4]
gi|440917773|emb|CCP94190.1| 30S ribosomal protein S17 [Chlamydia trachomatis L2b/Ams5]
Length = 83
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 51 SIRGR--ILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDH 108
+RGR G S+KM +T++VR ++ +Y + + S AH VKEGD
Sbjct: 4 DVRGRRKTKIGVVVSSKMEKTVVVRVERVYSHPQYAKVVRDSSKYYAH--NELDVKEGDT 61
Query: 109 VIIGQCRPLSKTVRFNVL 126
V I + RPLSKT R+ V+
Sbjct: 62 VRIQETRPLSKTKRWRVV 79
>gi|119773363|ref|YP_926103.1| 30S ribosomal protein S17 [Shewanella amazonensis SB2B]
gi|166220893|sp|A1S227.1|RS17_SHEAM RecName: Full=30S ribosomal protein S17
gi|119765863|gb|ABL98433.1| SSU ribosomal protein S17P [Shewanella amazonensis SB2B]
Length = 82
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 50 VSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHV 109
+S + R L G S KM+++I V L Y ++ KR + I AH + EGD V
Sbjct: 1 MSDKIRTLQGRVTSNKMDKSITVAVERLVKHPIYGKFIKRTTKIHAH-DELNQCNEGDIV 59
Query: 110 IIGQCRPLSKTVRFNVLKVI 129
I +CRPLSKT + ++ V+
Sbjct: 60 TIRECRPLSKTKSWTLVDVV 79
>gi|224510694|pdb|3FIC|Q Chain Q, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas
And Ef- Tu.Gdp.Kirromycin Ternary Complex, Fitted To A
6.4 A Cryo-Em Map. This File Contains The 30s Subunit
And The Ligands
Length = 100
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
++L G S KM +T+ +V R + H + Y + KR AH P + K GD V I
Sbjct: 3 KVLTGVVVSDKMQKTVTVLVERQFPHPL--YGKVIKRSKKYLAH-DPEEKYKLGDVVEII 59
Query: 113 QCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ RP+SK RF VL+++ +G +K
Sbjct: 60 ESRPISKRKRFRVLRLVESGRMDLVEKYL 88
>gi|15835420|ref|NP_297179.1| 30S ribosomal protein S17 [Chlamydia muridarum Nigg]
gi|270285600|ref|ZP_06194994.1| 30S ribosomal protein S17 [Chlamydia muridarum Nigg]
gi|270289610|ref|ZP_06195912.1| 30S ribosomal protein S17 [Chlamydia muridarum Weiss]
gi|301336996|ref|ZP_07225198.1| 30S ribosomal protein S17 [Chlamydia muridarum MopnTet14]
gi|13633939|sp|Q9PJM3.1|RS17_CHLMU RecName: Full=30S ribosomal protein S17
gi|7190834|gb|AAF39609.1| ribosomal protein S17 [Chlamydia muridarum Nigg]
Length = 83
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 51 SIRGR--ILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDH 108
+RGR G S+KM +T++VR ++ +Y + + S AH VKEGD
Sbjct: 4 DVRGRRKTKIGVVVSSKMEKTVVVRVERVYSHPQYAKVVRDSSKYYAH--NELDVKEGDT 61
Query: 109 VIIGQCRPLSKTVRFNVL 126
V I + RPLSKT R+ V+
Sbjct: 62 VRIQETRPLSKTKRWRVV 79
>gi|220935483|ref|YP_002514382.1| 30S ribosomal protein S17 [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|254765396|sp|B8GV49.1|RS17_THISH RecName: Full=30S ribosomal protein S17
gi|219996793|gb|ACL73395.1| ribosomal protein S17 [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 87
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 55 RILAGTCHSAKMN--RTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R + G S KM+ RTI++ R H + Y +Y +R + + H + GD V++
Sbjct: 9 RAVIGRVVSDKMDKTRTILIERKVRHPL--YGKYIRRSTKLHVH-DEGNEARMGDKVMVQ 65
Query: 113 QCRPLSKTVRFNVLKVIPAGS 133
+CRP+SKT F ++KV+ +
Sbjct: 66 ECRPMSKTKTFRLVKVLEKAA 86
>gi|374334002|ref|YP_005090689.1| 30S ribosomal protein S17 [Oceanimonas sp. GK1]
gi|372983689|gb|AEX99938.1| 30S ribosomal protein S17 [Oceanimonas sp. GK1]
Length = 86
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKK--YQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G S KM+++I V N FVK Y +Y KR + + H K GD V I
Sbjct: 7 RTLQGRVVSDKMDKSITVAIN--RFVKHPIYGKYIKRTTKLHVH-DENNECKAGDVVTIR 63
Query: 113 QCRPLSKTVRFNVLKVI 129
+CRPLSKT + ++K+I
Sbjct: 64 ECRPLSKTKSWTLVKII 80
>gi|436842975|ref|YP_007327353.1| ribosomal protein S17 (BS16) [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
gi|432171881|emb|CCO25254.1| ribosomal protein S17 (BS16) [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
Length = 88
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 114
R L G S K ++TI+VR L Y+++ +RH+ AH P GD V I +
Sbjct: 11 RFLNGVVISDKADKTIVVRVETLVKHSLYKKFIRRHTKFMAH-DPANECSIGDKVQIVEF 69
Query: 115 RPLSKTVRFNVLKVI 129
RPLSK R+++ K++
Sbjct: 70 RPLSKRKRWHLDKIL 84
>gi|390952389|ref|YP_006416148.1| 30S ribosomal protein S17 [Thiocystis violascens DSM 198]
gi|390428958|gb|AFL76023.1| SSU ribosomal protein S17P [Thiocystis violascens DSM 198]
Length = 88
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 54 GRILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVII 111
R L G S+ M++T+ ++ R H + Y ++ +R + I AH EGD V +
Sbjct: 10 NRTLEGRVTSSAMDKTVTVLIERRVKHPL--YGKFMRRSTKIHAH-DETNSCGEGDLVRV 66
Query: 112 GQCRPLSKTVRFNVLKVI 129
QCRPLSKT + +L +I
Sbjct: 67 EQCRPLSKTKSWRLLDII 84
>gi|374623966|ref|ZP_09696457.1| 30S ribosomal protein S17 [Ectothiorhodospira sp. PHS-1]
gi|373943058|gb|EHQ53603.1| 30S ribosomal protein S17 [Ectothiorhodospira sp. PHS-1]
Length = 88
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 55 RILAGTCHSAKMN--RTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R + G S KM+ RT+++ R H + Y +Y +R + + H + GD V++
Sbjct: 10 RAITGRVVSDKMDKTRTVLIERRVKHPL--YGKYMRRSTKLHVH-DENNDSRMGDKVLVK 66
Query: 113 QCRPLSKTVRFNVLKVI 129
+CRP+S+T F +LKV+
Sbjct: 67 ECRPMSRTKTFRLLKVV 83
>gi|148263148|ref|YP_001229854.1| 30S ribosomal protein S17 [Geobacter uraniireducens Rf4]
gi|146396648|gb|ABQ25281.1| SSU ribosomal protein S17P [Geobacter uraniireducens Rf4]
Length = 102
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 39 YIDKKCPFTGTVSIRG--RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 96
Y KK G +S RG + G S KM++T++V+ + L Y +Y KR + AH
Sbjct: 7 YSAKKGVREGYMSERGNRKTQVGVVVSDKMDKTVVVKVDRLIKHSVYNKYIKRSAKYKAH 66
Query: 97 I--SPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIP 130
+ C K GD V+I + RP+SK R+ V ++I
Sbjct: 67 DIDNSC---KIGDRVLIVETRPMSKDKRWKVRQIIE 99
>gi|444726167|gb|ELW66707.1| 40S ribosomal protein S11 [Tupaia chinensis]
Length = 88
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 50 VSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNI 93
+SIRGRIL+G RT +RR++L ++ KY ++KRH N+
Sbjct: 1 MSIRGRILSGVVTKTNSQRTTAIRRDHLLYMCKYNCFKKRHKNM 44
>gi|406929642|gb|EKD65178.1| hypothetical protein ACD_50C00168G0001, partial [uncultured
bacterium]
Length = 85
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 114
+IL G S KM +T +V+ + Y++ KR I A S F + GD V IGQ
Sbjct: 10 KILEGVVVSLKMQKTAVVQVARVAPHPIYKKLIKRDKKIKADTS-SFDLSIGDRVKIGQT 68
Query: 115 RPLSKTVRFNVLKVI 129
RPLS F +L+V+
Sbjct: 69 RPLSAQKHFKILEVL 83
>gi|390556567|ref|ZP_10242992.1| 30S ribosomal subunit protein S17 [Nitrolancetus hollandicus Lb]
gi|390174859|emb|CCF82275.1| 30S ribosomal subunit protein S17 [Nitrolancetus hollandicus Lb]
Length = 92
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 58 AGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPL 117
G S KM++T++V +YL Y + +R S AH + + GD V+I + RPL
Sbjct: 16 VGRVTSDKMDKTVVVSVDYLRRHPIYHKTVRRTSKFKAH-DEQNQCRTGDLVMIEETRPL 74
Query: 118 SKTVRFNVLKVIPAGSS 134
SKT R+ V +++ ++
Sbjct: 75 SKTKRWIVREILERATA 91
>gi|417949244|ref|ZP_12592382.1| 30S ribosomal protein S17 [Vibrio splendidus ATCC 33789]
gi|342808638|gb|EGU43787.1| 30S ribosomal protein S17 [Vibrio splendidus ATCC 33789]
Length = 84
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 54 GRILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHI--SPCFRVKEGDHV 109
RI G S KM+++I+V R H + Y +Y KR + + AH + C GD V
Sbjct: 5 NRIQQGRVVSDKMDKSIVVAIERTVKHPI--YGKYVKRTTKVHAHDEDNTCGL---GDKV 59
Query: 110 IIGQCRPLSKTVRFNVLKVI 129
I +CRPLSKT + ++KV+
Sbjct: 60 EIAECRPLSKTKSWTLVKVL 79
>gi|71891984|ref|YP_277714.1| 30S ribosomal protein S17 [Candidatus Blochmannia pennsylvanicus
str. BPEN]
gi|440509778|ref|YP_007347214.1| 30S ribosomal protein S17 [Candidatus Blochmannia chromaiodes str.
640]
gi|94730499|sp|Q493J9.1|RS17_BLOPB RecName: Full=30S ribosomal protein S17
gi|71796090|gb|AAZ40841.1| 30S ribosomal subunit protein S17 [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|440453991|gb|AGC03483.1| 30S ribosomal protein S17 [Candidatus Blochmannia chromaiodes str.
640]
Length = 84
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 50 VSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHV 109
+S R RIL G + KMN++++V L Y+++ KR + + H P GD V
Sbjct: 1 MSDRIRILLGRVCNKKMNKSVVVSIERLIKHSTYEKFIKRTTKLHVH-DPNNETNVGDLV 59
Query: 110 IIGQCRPLSKT 120
+ +CRP+SKT
Sbjct: 60 EVQECRPISKT 70
>gi|320451291|ref|YP_004203387.1| 30S ribosomal protein S17 [Thermus scotoductus SA-01]
gi|320151460|gb|ADW22838.1| 30S ribosomal protein S17 [Thermus scotoductus SA-01]
Length = 105
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
++L G S KM +T+ +V R + H + Y + KR AH P + K GD V I
Sbjct: 4 KVLTGVVVSDKMQKTVSVLVERQFPHPL--YGKVIKRSKKYLAH-DPEGKYKVGDVVEII 60
Query: 113 QCRPLSKTVRFNVLKVIPAG 132
+ RP+SK RF VL+++ G
Sbjct: 61 ESRPISKRKRFRVLRLVEGG 80
>gi|332982700|ref|YP_004464141.1| 30S ribosomal protein S17P [Mahella australiensis 50-1 BON]
gi|332700378|gb|AEE97319.1| SSU ribosomal protein S17P [Mahella australiensis 50-1 BON]
Length = 85
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 53 RGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R + G S KM++T++V L Y +Y KR AH EGD V+I
Sbjct: 6 RRKTAVGIVVSNKMDKTVVVANETLKKDPLYGKYIKRTKKYKAH-DENNECNEGDKVLIM 64
Query: 113 QCRPLSKTVRFNVLKVI 129
+ RPLSK R+ V++++
Sbjct: 65 ETRPLSKDKRWRVVEIL 81
>gi|260893363|ref|YP_003239460.1| 30S ribosomal protein S17 [Ammonifex degensii KC4]
gi|260865504|gb|ACX52610.1| 30S ribosomal protein S17 [Ammonifex degensii KC4]
Length = 99
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 114
++ G S KM++T++V L K YQ+ +R + AH + GD V+I +
Sbjct: 7 KVRVGRVVSDKMDKTVVVAIETLVRHKLYQKAVRRTKKVKAH-DENNECRVGDKVLIMET 65
Query: 115 RPLSKTVRFNVLKVIPAGSSGG 136
RPLSK R+ V++++ G G
Sbjct: 66 RPLSKEKRWRVVQILERGRHLG 87
>gi|302344347|ref|YP_003808876.1| 30S ribosomal protein S17 [Desulfarculus baarsii DSM 2075]
gi|301640960|gb|ADK86282.1| 30S ribosomal protein S17 [Desulfarculus baarsii DSM 2075]
Length = 87
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 54 GRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQ 113
+ L G S KM++T++V+ L Y++Y +R + AH + GD V+I Q
Sbjct: 9 AKALTGVVVSDKMDKTVVVQVERLVKHPIYKKYVRRRAKFMAH-DEANDCRVGDTVLIRQ 67
Query: 114 CRPLSKTVRFNVLKVI 129
RPLS+ R+ V KV+
Sbjct: 68 SRPLSRLKRWRVSKVL 83
>gi|313673458|ref|YP_004051569.1| 30S ribosomal protein S17 [Calditerrivibrio nitroreducens DSM
19672]
gi|312940214|gb|ADR19406.1| SSU ribosomal protein S17P [Calditerrivibrio nitroreducens DSM
19672]
Length = 87
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 114
++ GT S KM++T++V+ L KY ++ K+ AH K GD V + +
Sbjct: 7 KVRRGTVISDKMDKTVVVKVETLKMHPKYHKFVKKGKKYVAH-DENNECKIGDVVELMET 65
Query: 115 RPLSKTVRFNVLKVI--PAG 132
RPLSKT R+ V++++ P G
Sbjct: 66 RPLSKTKRWRVVRILERPVG 85
>gi|288957431|ref|YP_003447772.1| 30S ribosomal protein S17 [Azospirillum sp. B510]
gi|288909739|dbj|BAI71228.1| small subunit ribosomal protein S17 [Azospirillum sp. B510]
Length = 84
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R+L GT S K ++T+ +V R +H V Y+++ ++ AH + K GD V I
Sbjct: 4 RVLQGTVVSDKCDKTVTVLVERRVMHPV--YKKFIRQSKKYAAH-DEGNQYKVGDTVSII 60
Query: 113 QCRPLSKTVRFNVLKVIPAGSSGGA 137
+CRP+SK+ R+ V+ A SG A
Sbjct: 61 ECRPISKSKRWTVV-TESAADSGAA 84
>gi|347758872|ref|YP_004866434.1| 30S ribosomal protein S17 [Micavibrio aeruginosavorus ARL-13]
gi|347591390|gb|AEP10432.1| ribosomal S17 family protein [Micavibrio aeruginosavorus ARL-13]
Length = 127
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
RIL G S KM++T+ +V R +H V Y++Y ++ AH K GD V I
Sbjct: 4 RILEGNVVSDKMDKTVTVLVERRTMHPV--YKKYIRKSDKYAAHDEQNM-YKVGDRVQIE 60
Query: 113 QCRPLSKTVRFNVL 126
+CRP+SK + V+
Sbjct: 61 ECRPISKRKSWRVV 74
>gi|225621037|ref|YP_002722295.1| 30S ribosomal protein S17 [Brachyspira hyodysenteriae WA1]
gi|225215857|gb|ACN84591.1| 30S ribosomal protein S17 [Brachyspira hyodysenteriae WA1]
Length = 120
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 15/82 (18%)
Query: 55 RILAGTCHSAKMNRTIIVRRN-------YLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
R+L G S KM++TI+V+ Y + K +RY+ H EGD
Sbjct: 10 RVLEGIVVSDKMDKTIVVKVESKQKHPLYGKTISKNKRYKAHDEKNECH--------EGD 61
Query: 108 HVIIGQCRPLSKTVRFNVLKVI 129
V + +CRPLSK +F + K+I
Sbjct: 62 LVRVIECRPLSKDKKFRLTKII 83
>gi|375110340|ref|ZP_09756565.1| 30S ribosomal protein S17 [Alishewanella jeotgali KCTC 22429]
gi|374569582|gb|EHR40740.1| 30S ribosomal protein S17 [Alishewanella jeotgali KCTC 22429]
Length = 85
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 55 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G S KM+++I V R+ H + Y ++ KR + + H + KEGD V I
Sbjct: 7 RTLQGKVISNKMDKSITVAIERSVKHPI--YGKFIKRTTKLHVH-DENNQCKEGDVVTIR 63
Query: 113 QCRPLSKTVRFNVLKVIPAGS 133
+CRPLSKT + ++ V+ +
Sbjct: 64 ECRPLSKTKSWTLVAVVETAA 84
>gi|338730524|ref|YP_004659916.1| 30S ribosomal protein S17P [Thermotoga thermarum DSM 5069]
gi|335364875|gb|AEH50820.1| SSU ribosomal protein S17P [Thermotoga thermarum DSM 5069]
Length = 94
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 9/77 (11%)
Query: 57 LAGTCHSAKMNRTIIVR--RNYLH--FVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
L G S KM++TI+V+ R + H + K +R +K H++ + C K GD V I
Sbjct: 6 LIGVVVSDKMDKTIVVKVTRKFQHPLYKKTIERSKKYHAH--DEFNQC---KVGDIVEIE 60
Query: 113 QCRPLSKTVRFNVLKVI 129
+CRPLSKT R+ +++++
Sbjct: 61 ECRPLSKTKRWRLVRIL 77
>gi|219849878|ref|YP_002464311.1| 30S ribosomal protein S17 [Chloroflexus aggregans DSM 9485]
gi|219544137|gb|ACL25875.1| ribosomal protein S17 [Chloroflexus aggregans DSM 9485]
Length = 89
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 58 AGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHI--SPCFRVKEGDHVIIGQCR 115
G S KM++T++V+ +YL Y++ +R AH + C K GD V I + R
Sbjct: 13 VGRVVSDKMDKTVVVKVDYLKPHPLYRKIIRRSKKFHAHDEENTC---KVGDVVRIEETR 69
Query: 116 PLSKTVRFNVLKVIPAGSSG 135
PLS+T R+ V+++I G
Sbjct: 70 PLSRTKRWRVVEIIKRGEEA 89
>gi|374291061|ref|YP_005038096.1| 30S ribosomal protein S17 [Azospirillum lipoferum 4B]
gi|357423000|emb|CBS85843.1| 30S ribosomal subunit protein S17 [Azospirillum lipoferum 4B]
Length = 84
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 10/87 (11%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFV-KKYQRYEKRHSNIPAHIS-PCFRVKEGDHVI 110
R+L GT S K ++T+ +V R +H V KK+ R K+++ AH F+V GD V
Sbjct: 4 RVLQGTVVSDKCDKTVTVLVERRVMHPVYKKFIRQSKKYA---AHDEGNLFKV--GDTVS 58
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGA 137
I +CRP+SK+ R+ V+ A SG A
Sbjct: 59 IIECRPISKSKRWTVV-TESAADSGAA 84
>gi|296126874|ref|YP_003634126.1| 30S ribosomal protein S17 [Brachyspira murdochii DSM 12563]
gi|429123829|ref|ZP_19184361.1| 30S ribosomal protein S17 [Brachyspira hampsonii 30446]
gi|296018690|gb|ADG71927.1| 30S ribosomal protein S17 [Brachyspira murdochii DSM 12563]
gi|426280398|gb|EKV57413.1| 30S ribosomal protein S17 [Brachyspira hampsonii 30446]
Length = 120
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 15/82 (18%)
Query: 55 RILAGTCHSAKMNRTIIVRRN-------YLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
R+L G S KM++TI+V+ Y + K +RY+ H EGD
Sbjct: 10 RVLEGIVVSDKMDKTIVVKVESKQKHPLYGKTISKNKRYKAHDEKNECH--------EGD 61
Query: 108 HVIIGQCRPLSKTVRFNVLKVI 129
V + +CRPLSK +F + K+I
Sbjct: 62 LVRVIECRPLSKDKKFRLTKII 83
>gi|296533996|ref|ZP_06896512.1| 30S ribosomal protein S17 [Roseomonas cervicalis ATCC 49957]
gi|296265662|gb|EFH11771.1| 30S ribosomal protein S17 [Roseomonas cervicalis ATCC 49957]
Length = 93
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R+L G S KM++T+ +V R +H + Y+++ +R AH KEGD V I
Sbjct: 4 RVLTGRVVSDKMDKTVTVLVERRVMHPL--YKKFIRRSKKYAAHDDANL-CKEGDVVSIE 60
Query: 113 QCRPLSK 119
+CRP+SK
Sbjct: 61 ECRPISK 67
>gi|222056696|ref|YP_002539058.1| 30S ribosomal protein S17 [Geobacter daltonii FRC-32]
gi|254811362|sp|B9M6G9.1|RS17_GEOSF RecName: Full=30S ribosomal protein S17
gi|221565985|gb|ACM21957.1| ribosomal protein S17 [Geobacter daltonii FRC-32]
Length = 85
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 59 GTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHI--SPCFRVKEGDHVIIGQCRP 116
G S KM++T++V+ + L Y +Y KR + AH + C K GD V+I + RP
Sbjct: 12 GVVVSDKMDKTVVVKVDRLIKHSVYNKYIKRSAKYKAHDVDNSC---KTGDRVLIVETRP 68
Query: 117 LSKTVRFNVLKVIPAGS 133
+SK R+ V ++I +
Sbjct: 69 MSKDKRWKVRQIIERNA 85
>gi|378821687|ref|ZP_09844556.1| 30S ribosomal protein S17 [Sutterella parvirubra YIT 11816]
gi|378599463|gb|EHY32482.1| 30S ribosomal protein S17 [Sutterella parvirubra YIT 11816]
Length = 89
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L GT S+KM +T+ +V R H + Y +Y + AH EGD V I
Sbjct: 11 RTLQGTVTSSKMQKTVTVLVERKVKHPL--YGKYVVKSKKYHAHDE--LGCNEGDKVEIA 66
Query: 113 QCRPLSKTVRFNVLKVI 129
+C P+SKT + V KVI
Sbjct: 67 ECAPISKTKSWTVTKVI 83
>gi|429463063|ref|YP_007184526.1| small subunit ribosomal protein S17 [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451811845|ref|YP_007448300.1| small subunit ribosomal protein S17 [Candidatus
Kinetoplastibacterium crithidii TCC036E]
gi|429338577|gb|AFZ83000.1| small subunit ribosomal protein S17 [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451777003|gb|AGF48002.1| small subunit ribosomal protein S17 [Candidatus
Kinetoplastibacterium crithidii TCC036E]
Length = 92
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 53 RGRILAGTCHSAKMNRTIIVR--RNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
R R+L G S+KMN++++V+ R H V + R +N AH + K+GD V
Sbjct: 11 RQRVLIGKVISSKMNKSVVVQVERRVKHQV--LGKVVTRSANYKAH-DEENKYKDGDIVE 67
Query: 111 IGQCRPLSKTVRFNVLKVIPAGS 133
I +CRP+S+ + V+ ++ A +
Sbjct: 68 IKECRPISRDKSWMVMSLVTAAT 90
>gi|384210003|ref|YP_005595723.1| 30S ribosomal protein S17 [Brachyspira intermedia PWS/A]
gi|343387653|gb|AEM23143.1| 30S ribosomal protein S17 [Brachyspira intermedia PWS/A]
Length = 120
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 15/82 (18%)
Query: 55 RILAGTCHSAKMNRTIIVRRN-------YLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
R+L G S KM++TI+V+ Y + K +RY+ H EGD
Sbjct: 10 RVLEGIVVSDKMDKTIVVKVESKQKHPLYGKTISKNKRYKAHDEKNECH--------EGD 61
Query: 108 HVIIGQCRPLSKTVRFNVLKVI 129
V + +CRPLSK +F + K+I
Sbjct: 62 LVRVIECRPLSKDKKFRLTKII 83
>gi|365854821|ref|ZP_09394886.1| 30S ribosomal protein S17 [Acetobacteraceae bacterium AT-5844]
gi|363719770|gb|EHM03069.1| 30S ribosomal protein S17 [Acetobacteraceae bacterium AT-5844]
Length = 96
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R+L G S K ++TI +V R +H + Y+++ +R AH KEGD V I
Sbjct: 4 RVLTGRVTSDKQDKTITVLVERRVMHPL--YKKFIRRSKKYAAHDDANL-CKEGDLVSIE 60
Query: 113 QCRPLSKTVRFNVLK------VIPAGSSGGAKKA 140
+CRP+SK + ++ +PAG A+ A
Sbjct: 61 ECRPISKRKTWILVARNGEPVAVPAGFDAAAEPA 94
>gi|345870983|ref|ZP_08822932.1| 30S ribosomal protein S17 [Thiorhodococcus drewsii AZ1]
gi|343921137|gb|EGV31861.1| 30S ribosomal protein S17 [Thiorhodococcus drewsii AZ1]
Length = 86
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 54 GRILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVII 111
R L G S+ M++T+ ++ R H + Y ++ +R + I AH EGD V +
Sbjct: 8 NRTLEGRVTSSAMDKTVTVLIERRVKHPL--YGKFLRRSTKIHAH-DESNACGEGDLVRV 64
Query: 112 GQCRPLSKTVRFNVLKVI 129
QCRPLSKT + +L++I
Sbjct: 65 EQCRPLSKTKTWRLLEII 82
>gi|386817425|ref|ZP_10104643.1| SSU ribosomal protein S17P [Thiothrix nivea DSM 5205]
gi|386422001|gb|EIJ35836.1| SSU ribosomal protein S17P [Thiothrix nivea DSM 5205]
Length = 91
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 15/82 (18%)
Query: 55 RILAGTCHSAKMNRTIIV--RRNYLH-----FVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
R L G S KM+++I+V R H F+K+ ++Y N + C +EGD
Sbjct: 11 RSLMGRVVSNKMDKSIVVLMERQVQHPVYGKFIKRSKKYHVHDEN-----NEC---REGD 62
Query: 108 HVIIGQCRPLSKTVRFNVLKVI 129
V+ +CRPLSKT + ++K++
Sbjct: 63 TVLFKECRPLSKTKHWTLIKIV 84
>gi|95931434|ref|ZP_01314140.1| ribosomal protein S17 [Desulfuromonas acetoxidans DSM 684]
gi|95132502|gb|EAT14195.1| ribosomal protein S17 [Desulfuromonas acetoxidans DSM 684]
Length = 86
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 57 LAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRP 116
L G S KM++T++V+ + L Y++Y KR AH + GD V+I + RP
Sbjct: 11 LVGIVTSDKMDKTVVVKVDTLVQHPVYKKYIKRSMKYKAH-DEENQCAAGDKVLITEARP 69
Query: 117 LSKTVRFNVLKVI 129
LS+ R+ V +V+
Sbjct: 70 LSRDKRWRVSQVL 82
>gi|393763736|ref|ZP_10352351.1| 30S ribosomal protein S17 [Alishewanella agri BL06]
gi|397171454|ref|ZP_10494858.1| 30S ribosomal protein S17 [Alishewanella aestuarii B11]
gi|392605352|gb|EIW88248.1| 30S ribosomal protein S17 [Alishewanella agri BL06]
gi|396086917|gb|EJI84523.1| 30S ribosomal protein S17 [Alishewanella aestuarii B11]
Length = 85
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 55 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G S KM+++I V R H + Y ++ KR + + H + KEGD V I
Sbjct: 7 RTLQGKVISNKMDKSITVAIERQVKHPI--YGKFIKRTTKLHVH-DENNQCKEGDVVTIR 63
Query: 113 QCRPLSKTVRFNVLKVIPAGSS 134
+CRPLSKT + ++ V+ +
Sbjct: 64 ECRPLSKTKSWTLVAVVETAAE 85
>gi|407771086|ref|ZP_11118449.1| 30S ribosomal protein S17 [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407285975|gb|EKF11468.1| 30S ribosomal protein S17 [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 77
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 55 RILAGTCHSAKMNRTIIVR--RNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R+L GT S K ++T++VR R +H + Y++Y ++ AH R K GD V I
Sbjct: 4 RVLQGTVVSTKNDKTVVVRVERQVMHPL--YKKYVRKSKKFHAHDEEN-RFKTGDVVRIR 60
Query: 113 QCRPLSKTVRFNVL 126
+CRP+SK + V+
Sbjct: 61 ECRPISKLKSWEVV 74
>gi|217967378|ref|YP_002352884.1| 30S ribosomal protein S17 [Dictyoglomus turgidum DSM 6724]
gi|217336477|gb|ACK42270.1| ribosomal protein S17 [Dictyoglomus turgidum DSM 6724]
Length = 112
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 57 LAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 114
+ G SAKM +TI+V + Y H + Y++ R AH +EGD V+I +
Sbjct: 8 MIGKVVSAKMQKTIVVLVEQTYTHPL--YKKTVTRRKKYKAH-DEHQEAREGDIVLIRET 64
Query: 115 RPLSKTVRFNVLKVIPAGS 133
RPLSK R+ ++++I G
Sbjct: 65 RPLSKEKRWRLVRIIKRGE 83
>gi|406915547|gb|EKD54618.1| 30S ribosomal protein S17 [uncultured bacterium]
Length = 92
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 52 IRGRILAGTCHSAKMNRTIIVR--RNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHV 109
+ GR + G S KM++TI+V R H + Y +Y ++ S + AH S GD V
Sbjct: 7 VSGRTVVGKVISNKMDKTIVVEVERKVKHPL--YGKYMRKFSRMYAHDSDNL-CHIGDLV 63
Query: 110 IIGQCRPLSKTVRFNVLKVI 129
+I CRP+SKT + +++V+
Sbjct: 64 LIKMCRPISKTKSWMLVEVV 83
>gi|367470167|ref|ZP_09469883.1| SSU ribosomal protein S17p (S11e) [Patulibacter sp. I11]
gi|365814745|gb|EHN09927.1| SSU ribosomal protein S17p (S11e) [Patulibacter sp. I11]
Length = 196
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 53 RGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R +I G SAK ++TIIVR + KY + + S + AH EGD V +
Sbjct: 117 RVQIRQGVVSSAKGDKTIIVRIDAQKRHPKYHKIVRSSSKLQAHDE-HNEAGEGDTVRVQ 175
Query: 113 QCRPLSKTVRFNVLKVI 129
RP+SKT R+ + +++
Sbjct: 176 SSRPMSKTKRWRLAEIV 192
>gi|344941046|ref|ZP_08780334.1| 30S ribosomal protein S17 [Methylobacter tundripaludum SV96]
gi|344262238|gb|EGW22509.1| 30S ribosomal protein S17 [Methylobacter tundripaludum SV96]
Length = 87
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R + G S KMN+TI +V R H V Y +Y KR + + AH EGD V I
Sbjct: 9 RTITGRVVSNKMNKTITVLVERVVKHPV--YGKYIKRSTKMMAHDEQNI-CHEGDVVSIT 65
Query: 113 QCRPLSKTVRFNVLKVIPAGS 133
CRP+SK F +++V+ + +
Sbjct: 66 SCRPMSKNKTFMLVQVLESAN 86
>gi|157363451|ref|YP_001470218.1| 30S ribosomal protein S17 [Thermotoga lettingae TMO]
gi|167011184|sp|A8F4S0.1|RS17_THELT RecName: Full=30S ribosomal protein S17
gi|157314055|gb|ABV33154.1| ribosomal protein S17 [Thermotoga lettingae TMO]
Length = 95
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 9/77 (11%)
Query: 57 LAGTCHSAKMNRTIIVR--RNYLHFVKKYQRYEKRHSNIPAHI--SPCFRVKEGDHVIIG 112
L G S KM++T++V R H V Y++Y +R AH + C K GD V+I
Sbjct: 6 LTGVVVSNKMDKTVVVEVTRKLEHPV--YKKYIQRSKKYYAHDEKNEC---KAGDTVLIE 60
Query: 113 QCRPLSKTVRFNVLKVI 129
+ RPLSK R+ V++V+
Sbjct: 61 ETRPLSKMKRWRVVEVL 77
>gi|392952485|ref|ZP_10318040.1| 30S ribosomal protein S17 [Hydrocarboniphaga effusa AP103]
gi|391861447|gb|EIT71975.1| 30S ribosomal protein S17 [Hydrocarboniphaga effusa AP103]
Length = 93
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 47 TGTVSIRGRILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVK 104
T T + R + G S K ++TI +V R+ H V Y + +R + + AH K
Sbjct: 8 TATAEKKERRVVGRVASNKGDKTITVVVERSVKHPV--YNKILRRSTKLYAHDETNV-AK 64
Query: 105 EGDHVIIGQCRPLSKTVRFNVLKVI 129
EGD V I + RPLS+T RF +++V+
Sbjct: 65 EGDLVAIVETRPLSRTKRFKLVEVL 89
>gi|384261641|ref|YP_005416827.1| 30S ribosomal protein S17 [Rhodospirillum photometricum DSM 122]
gi|378402741|emb|CCG07857.1| 30S ribosomal protein S17 [Rhodospirillum photometricum DSM 122]
Length = 79
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 55 RILAGTCHSAKMNRTIIVR--RNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
RIL G S KM++TI+V+ R + H + Y+++ KR AH + K GD V I
Sbjct: 4 RILQGVVVSDKMDKTIVVKVERRFKHPI--YKKFIKRSKKFSAH-DENNQFKTGDIVRIR 60
Query: 113 QCRPLSKTVRFNVL 126
+C P+S+T + V+
Sbjct: 61 ECAPISRTKTWEVI 74
>gi|121997640|ref|YP_001002427.1| 30S ribosomal protein S17 [Halorhodospira halophila SL1]
gi|166219702|sp|A1WVB3.1|RS17_HALHL RecName: Full=30S ribosomal protein S17
gi|121589045|gb|ABM61625.1| SSU ribosomal protein S17P [Halorhodospira halophila SL1]
Length = 86
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 55 RILAGTCHSAKMNRT--IIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R + G S+KM++T ++V R H + Y ++ +R + + AH +EGD V I
Sbjct: 8 RTVNGRVVSSKMDKTLTVLVERRVKHPL--YGKFIRRSTKLHAH-DEGNEGREGDWVSIQ 64
Query: 113 QCRPLSKTVRFNVLKVIPAGSS 134
+CRPLSK + ++KV+ +S
Sbjct: 65 ECRPLSKNKTWRLVKVLERAAS 86
>gi|163847932|ref|YP_001635976.1| 30S ribosomal protein S17 [Chloroflexus aurantiacus J-10-fl]
gi|222525812|ref|YP_002570283.1| 30S ribosomal protein S17 [Chloroflexus sp. Y-400-fl]
gi|163669221|gb|ABY35587.1| ribosomal protein S17 [Chloroflexus aurantiacus J-10-fl]
gi|222449691|gb|ACM53957.1| ribosomal protein S17 [Chloroflexus sp. Y-400-fl]
Length = 89
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 58 AGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPL 117
G S KMN+T++V +YL Y++ +R AH K GD V I + RPL
Sbjct: 13 VGRVVSDKMNKTVVVAVDYLKPHPLYRKIIRRTKKFHAHDEENV-CKVGDTVRIEETRPL 71
Query: 118 SKTVRFNVLKVIPAGSS 134
S+T R+ V++++ G
Sbjct: 72 SRTKRWRVVEILKRGEE 88
>gi|170289174|ref|YP_001739412.1| 30S ribosomal protein S17 [Thermotoga sp. RQ2]
gi|226698037|sp|B1LBN1.1|RS17_THESQ RecName: Full=30S ribosomal protein S17
gi|170176677|gb|ACB09729.1| ribosomal protein S17 [Thermotoga sp. RQ2]
Length = 107
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 57 LAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHI--SPCFRVKEGDHVIIGQC 114
L G S KM++T++V L Y++Y KR AH + C K GD V I +
Sbjct: 6 LTGIVVSDKMDKTVVVAVEKLVQHTIYKKYVKRTKKYHAHDERNEC---KIGDVVEIEET 62
Query: 115 RPLSKTVRFNVLKVI 129
RPLSKT R+ V+++I
Sbjct: 63 RPLSKTKRWRVVRII 77
>gi|15644239|ref|NP_229291.1| 30S ribosomal protein S17 [Thermotoga maritima MSB8]
gi|418045549|ref|ZP_12683644.1| 30S ribosomal protein S17 [Thermotoga maritima MSB8]
gi|6226698|sp|P38519.2|RS17_THEMA RecName: Full=30S ribosomal protein S17
gi|4982055|gb|AAD36557.1|AE001798_22 ribosomal protein S17 [Thermotoga maritima MSB8]
gi|351676434|gb|EHA59587.1| 30S ribosomal protein S17 [Thermotoga maritima MSB8]
Length = 107
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 57 LAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRP 116
L G S KM++T++V L Y++Y KR AH K GD V I + RP
Sbjct: 6 LTGIVVSDKMDKTVVVAVEKLVQHPLYKKYVKRTKKYHAH-DERNECKIGDVVEIEETRP 64
Query: 117 LSKTVRFNVLKVI 129
LSKT R+ V+++I
Sbjct: 65 LSKTKRWRVVRII 77
>gi|359407976|ref|ZP_09200449.1| 30S ribosomal protein S17 [SAR116 cluster alpha proteobacterium
HIMB100]
gi|356677042|gb|EHI49390.1| 30S ribosomal protein S17 [SAR116 cluster alpha proteobacterium
HIMB100]
Length = 80
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 55 RILAGTCHSAKMNRTIIVR--RNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
RI+ GT S K ++T+IVR R +H V Y+++ AH + + K GD V I
Sbjct: 4 RIMQGTVVSDKADKTVIVRVERRIMHPV--YKKFINTSKKFAAHDAEN-KAKTGDTVSIR 60
Query: 113 QCRPLSKTVRFNVL 126
+C P+SK F V+
Sbjct: 61 ECAPISKNKSFEVV 74
>gi|381207344|ref|ZP_09914415.1| 30S ribosomal protein S17 [SAR324 cluster bacterium JCVI-SC AAA005]
Length = 86
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 114
+I +G S KM+++I+V+ + Y+R +R AH R + GD+V I +C
Sbjct: 6 KIRSGVVVSNKMDKSIVVKIETVVKHPLYKRTIRRSKKFKAH-DEQNRARTGDYVSIIEC 64
Query: 115 RPLSKTVRFNVLKVIPAGSSGGA 137
RP+SKT + +L I ++G A
Sbjct: 65 RPISKTKTWRLLS-IKDNTTGAA 86
>gi|350563349|ref|ZP_08932171.1| 30S ribosomal protein S17 [Thioalkalimicrobium aerophilum AL3]
gi|349779213|gb|EGZ33560.1| 30S ribosomal protein S17 [Thioalkalimicrobium aerophilum AL3]
Length = 87
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK--KYQRYEKRHSNIPAHISPCFRVKE 105
T +++ R AG S M+ +I+V +VK KY++Y K+ + I AH + + +
Sbjct: 2 STENLKARTRAGVVVSNAMDSSIVVLTE--RYVKHAKYKKYVKKSTKIMAHDAD-NQCQV 58
Query: 106 GDHVIIGQCRPLSKTVRFNVLKV 128
GD V I +CRP+SK + ++++
Sbjct: 59 GDKVTIQECRPISKRKSWTLVEI 81
>gi|322418373|ref|YP_004197596.1| 30S ribosomal protein S17 [Geobacter sp. M18]
gi|320124760|gb|ADW12320.1| 30S ribosomal protein S17 [Geobacter sp. M18]
Length = 85
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 58 AGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH-ISPCFRVKEGDHVIIGQCRP 116
G S KM++T +V+ + L Y +Y KR + AH I ++ GD VII + RP
Sbjct: 11 VGVVVSDKMDKTAVVKVDRLVKHPVYNKYIKRSAKYKAHDIDNSAKI--GDRVIIVETRP 68
Query: 117 LSKTVRFNVLKVIPA 131
LSK R+ + ++I +
Sbjct: 69 LSKDKRWKIRQIIES 83
>gi|384085357|ref|ZP_09996532.1| 30S ribosomal protein S17 [Acidithiobacillus thiooxidans ATCC
19377]
Length = 91
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 55 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISP--CFRVKEGDHVI 110
R L GT S +M++TI+V R H + Y++Y +R AH + C GD V
Sbjct: 8 RSLVGTVVSDRMDKTIVVLVERRIQHPL--YKKYIRRSKKFHAHDADNACHI---GDTVK 62
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGG 136
I +CRPLSKT + ++ V+ G G
Sbjct: 63 IEECRPLSKTKSWRLVNVLSQGVVEG 88
>gi|85858156|ref|YP_460358.1| 30S ribosomal protein S17 [Syntrophus aciditrophicus SB]
gi|94730554|sp|Q2LQB1.1|RS17_SYNAS RecName: Full=30S ribosomal protein S17
gi|85721247|gb|ABC76190.1| SSU ribosomal protein S17P [Syntrophus aciditrophicus SB]
Length = 85
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 54 GRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHI--SPCFRVKEGDHVII 111
R + G S KM++TI++R L + +Y ++H H + C K GD VI+
Sbjct: 7 NRTIKGVVVSNKMDKTIVIRAERLVKHPVFHKYTRKHVKYMVHDEKNEC---KVGDTVIV 63
Query: 112 GQCRPLSKTVRFNVLKVIPAGS 133
+ RPLS+ R+ +L+++
Sbjct: 64 MESRPLSRLKRWRMLRIVAKAE 85
>gi|395765133|ref|ZP_10445749.1| 30S ribosomal protein S17 [Bartonella sp. DB5-6]
gi|395412986|gb|EJF79465.1| 30S ribosomal protein S17 [Bartonella sp. DB5-6]
Length = 79
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 9/77 (11%)
Query: 55 RILAGTCHSAKMNRTIIVR--RNYLH-FVKKYQRYEKRHSNIPAHI-SPCFRVKEGDHVI 110
RIL G S K ++T++V+ R Y H +KK R K++ AH S F+V GD V
Sbjct: 4 RILQGVVVSDKNDKTVVVKVERRYSHPLLKKTVRQSKKYK---AHDESNQFKV--GDQVS 58
Query: 111 IGQCRPLSKTVRFNVLK 127
I + RP+SK R+ V+K
Sbjct: 59 IQESRPISKDKRWTVVK 75
>gi|209964049|ref|YP_002296964.1| 30S ribosomal protein S17 [Rhodospirillum centenum SW]
gi|226698012|sp|B6IRR5.1|RS17_RHOCS RecName: Full=30S ribosomal protein S17
gi|209957515|gb|ACI98151.1| ribosomal protein S17 [Rhodospirillum centenum SW]
Length = 85
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 55 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISP-CFRVKEGDHVII 111
RIL GT S K ++T+IV R +H V Y+++ K+ AH F++ GD V I
Sbjct: 4 RILQGTVVSDKGDKTVIVLVERRVMHPV--YKKFIKQSKKYAAHDEANAFKI--GDVVQI 59
Query: 112 GQCRPLSKTVRFNVL 126
+CRP+SK R+ V+
Sbjct: 60 EECRPISKRKRWTVV 74
>gi|148270431|ref|YP_001244891.1| 30S ribosomal protein S17 [Thermotoga petrophila RKU-1]
gi|281412738|ref|YP_003346817.1| 30S ribosomal protein S17 [Thermotoga naphthophila RKU-10]
gi|403253574|ref|ZP_10919875.1| 30S ribosomal protein S17 [Thermotoga sp. EMP]
gi|166220911|sp|A5IM92.1|RS17_THEP1 RecName: Full=30S ribosomal protein S17
gi|147735975|gb|ABQ47315.1| SSU ribosomal protein S17P [Thermotoga petrophila RKU-1]
gi|281373841|gb|ADA67403.1| 30S ribosomal protein S17 [Thermotoga naphthophila RKU-10]
gi|402811108|gb|EJX25596.1| 30S ribosomal protein S17 [Thermotoga sp. EMP]
Length = 107
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 57 LAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRP 116
L G S KM++T++V L Y++Y KR AH K GD V I + RP
Sbjct: 6 LTGIVVSDKMDKTVVVAVEKLVQHPIYKKYVKRTKKYHAH-DERNECKIGDVVEIEETRP 64
Query: 117 LSKTVRFNVLKVI 129
LSKT R+ V+++I
Sbjct: 65 LSKTKRWRVVRII 77
>gi|148982471|ref|ZP_01816773.1| ribosomal protein S17 [Vibrionales bacterium SWAT-3]
gi|145960462|gb|EDK25839.1| ribosomal protein S17 [Vibrionales bacterium SWAT-3]
Length = 84
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 54 GRILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHI--SPCFRVKEGDHV 109
RI G S KM+++I+V R H + Y +Y KR + + AH + C GD V
Sbjct: 5 NRIQQGRVVSDKMDKSIVVAIERTVKHPI--YGKYVKRTTKVHAHDEDNTCGL---GDKV 59
Query: 110 IIGQCRPLSKTVRFNVLKVI 129
I +CRPLSKT + ++KV+
Sbjct: 60 EIVECRPLSKTKSWTLVKVL 79
>gi|258406176|ref|YP_003198918.1| 30S ribosomal protein S17 [Desulfohalobium retbaense DSM 5692]
gi|257798403|gb|ACV69340.1| 30S ribosomal protein S17 [Desulfohalobium retbaense DSM 5692]
Length = 88
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 114
RI+ G S + ++TI+VR L Y++Y +R + AH P K GD V + +
Sbjct: 11 RIMTGYVVSDRTDKTIVVRAETLVKHSLYKKYVRRRKKLMAH-DPANDCKVGDKVQVIEH 69
Query: 115 RPLSKTVRFNVLKVIPAG 132
RPLS+ R+++ K++
Sbjct: 70 RPLSRRKRWHLHKILEKA 87
>gi|209693933|ref|YP_002261861.1| 30S ribosomal protein S17 [Aliivibrio salmonicida LFI1238]
gi|226697933|sp|B6EPT4.1|RS17_ALISL RecName: Full=30S ribosomal protein S17
gi|208007884|emb|CAQ78014.1| 30S ribosomal protein S17 [Aliivibrio salmonicida LFI1238]
Length = 84
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 55 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R + G S KM+++I+V R H + Y +Y KR + + AH +GD V+I
Sbjct: 6 RTMQGRVISDKMDKSIVVAIERMVKHPI--YGKYIKRTTKLHAH-DENNECGQGDLVVIR 62
Query: 113 QCRPLSKTVRFNVLKVIPAGSS 134
+CRPLSKT + ++ ++ +
Sbjct: 63 ECRPLSKTKSWTLVNIVEKAKA 84
>gi|350553100|ref|ZP_08922286.1| 30S ribosomal protein S17 [Thiorhodospira sibirica ATCC 700588]
gi|349791951|gb|EGZ45821.1| 30S ribosomal protein S17 [Thiorhodospira sibirica ATCC 700588]
Length = 93
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 59 GTCHSAKMN--RTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRP 116
G S KM+ RT+++ R H + Y +Y +R + + H + GD V+I +CRP
Sbjct: 19 GRVISDKMDKTRTVLIERRVRHPL--YGKYIRRSTKLHVH-DENNEARLGDTVMISECRP 75
Query: 117 LSKTVRFNVLKVI 129
LSKT F +++V+
Sbjct: 76 LSKTKSFRLVRVL 88
>gi|392383002|ref|YP_005032199.1| 30S ribosomal subunit protein S17 [Azospirillum brasilense Sp245]
gi|356877967|emb|CCC98829.1| 30S ribosomal subunit protein S17 [Azospirillum brasilense Sp245]
Length = 84
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 55 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R+L GT S K ++T+IV R +H V Y+++ ++ AH + K GD V I
Sbjct: 4 RVLQGTVVSDKGDKTVIVLVERRVMHPV--YKKFIRQSKKYAAH-DEGNQFKVGDTVSII 60
Query: 113 QCRPLSKTVRFNVLKVIPAGSSGGA 137
+CRP+SK R+ V+ + A SG A
Sbjct: 61 ECRPISKRKRWTVV-LESAAVSGAA 84
>gi|189424419|ref|YP_001951596.1| 30S ribosomal protein S17 [Geobacter lovleyi SZ]
gi|226697981|sp|B3E7U4.1|RS17_GEOLS RecName: Full=30S ribosomal protein S17
gi|189420678|gb|ACD95076.1| ribosomal protein S17 [Geobacter lovleyi SZ]
Length = 85
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHI--SPCFRVKEGDHVIIG 112
R G S KM +T++VR + L Y +Y KR H + C K GD V I
Sbjct: 8 RTQTGVVVSDKMEKTVVVRVDRLVKHPLYNKYIKRSVKYKVHDEKNSC---KAGDKVQIV 64
Query: 113 QCRPLSKTVRFNVLKVIPAGS 133
+CRPLSK R+ + +++ + +
Sbjct: 65 ECRPLSKDKRWALRQILESAA 85
>gi|383767982|ref|YP_005446965.1| 30S ribosomal protein S17 [Phycisphaera mikurensis NBRC 102666]
gi|381388252|dbj|BAM05068.1| 30S ribosomal protein S17 [Phycisphaera mikurensis NBRC 102666]
Length = 115
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 59 GTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLS 118
G S K ++T V + KY +Y K+ H +KEGD V IG CRPLS
Sbjct: 18 GVVTSVKRDKTATVVVEFKVQHPKYGKYIKKAQKFQVHDGKN-ELKEGDRVEIGSCRPLS 76
Query: 119 KTVRFNVLKVIPAG 132
KT +++V+ A
Sbjct: 77 KTKSHRLVRVVEAA 90
>gi|253701913|ref|YP_003023102.1| 30S ribosomal protein S17 [Geobacter sp. M21]
gi|259494782|sp|C6E4P8.1|RS17_GEOSM RecName: Full=30S ribosomal protein S17
gi|251776763|gb|ACT19344.1| ribosomal protein S17 [Geobacter sp. M21]
Length = 85
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 58 AGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPL 117
G S KM++T +V+ + L Y +Y KR + AH K GD VII + RPL
Sbjct: 11 VGVVVSDKMDKTAVVKVDRLVKHPVYNKYIKRSAKYKAHDMDNA-AKIGDRVIIVETRPL 69
Query: 118 SKTVRFNVLKVIPAGS 133
SK R+ + ++I + +
Sbjct: 70 SKDKRWKIRQIIESKA 85
>gi|410664369|ref|YP_006916740.1| 30S ribosomal protein S17 [Simiduia agarivorans SA1 = DSM 21679]
gi|409026726|gb|AFU99010.1| 30S ribosomal protein S17 [Simiduia agarivorans SA1 = DSM 21679]
Length = 88
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 54 GRILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVII 111
R L G S KM+++I+V R H + Y +Y + S + AH K GD V I
Sbjct: 8 ARTLTGKVVSDKMDKSIVVLIERREKHPI--YGKYVSKSSKLKAH-DENNECKIGDLVTI 64
Query: 112 GQCRPLSKTVRFNVLKVI 129
+ RPLSKT + ++K++
Sbjct: 65 AESRPLSKTKSWALVKIV 82
>gi|348027839|ref|YP_004870525.1| 30S ribosomal protein S17 [Glaciecola nitratireducens FR1064]
gi|347945182|gb|AEP28532.1| ribosomal protein S17 [Glaciecola nitratireducens FR1064]
Length = 83
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R + G S KM++TI +V R H + Y ++ KR + + AH EGD V I
Sbjct: 7 RTVQGRVTSNKMDKTITVMVERTVKHPI--YGKFIKRSTKLHAH-DEANVCNEGDVVTIT 63
Query: 113 QCRPLSKTVRFNVLKVI 129
+CRPLSK+ + ++ VI
Sbjct: 64 ECRPLSKSKTWMLVDVI 80
>gi|426400725|ref|YP_007019697.1| 30S ribosomal protein S17 [Candidatus Endolissoclinum patella L2]
gi|425857393|gb|AFX98429.1| Ribosomal protein S17 [Candidatus Endolissoclinum patella L2]
Length = 93
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 55 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
RIL GT + K ++TIIV +R +H + Y+++ R AH P K+GD V I
Sbjct: 4 RILQGTVVNNKSDKTIIVNVQRRVMHPL--YKKFITRSHRFSAH-DPKNSFKQGDVVRII 60
Query: 113 QCRPLSKTVRFNVL 126
+C P+SK +F VL
Sbjct: 61 ECAPISKNKKFAVL 74
>gi|157377440|ref|YP_001476040.1| 30S ribosomal protein S17 [Shewanella sediminis HAW-EB3]
gi|189029659|sp|A8G1D9.1|RS17_SHESH RecName: Full=30S ribosomal protein S17
gi|157319814|gb|ABV38912.1| ribosomal protein S17 [Shewanella sediminis HAW-EB3]
Length = 82
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 55 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G S KM+++I V R H + Y +Y KR + I AH + GD V I
Sbjct: 6 RTLQGRVLSNKMDKSITVAIERKVKHPL--YGKYLKRTTKIHAH-DEQNQCNAGDVVTIR 62
Query: 113 QCRPLSKTVRFNVLKVI 129
+CRPLSKT + +++V+
Sbjct: 63 ECRPLSKTKSWTLVEVV 79
>gi|388259055|ref|ZP_10136229.1| 30S ribosomal protein S17 [Cellvibrio sp. BR]
gi|387937013|gb|EIK43570.1| 30S ribosomal protein S17 [Cellvibrio sp. BR]
Length = 88
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 54 GRILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVII 111
R L G S KM++TI ++ R H + Y +Y + S + AH K GD V +
Sbjct: 8 ARTLTGKVVSDKMDKTITVLIERRVKHEL--YGKYTTKSSKLHAH-DEKNECKMGDIVTV 64
Query: 112 GQCRPLSKTVRFNVLKVIPAGS 133
+ RPLSKT ++++K+ S
Sbjct: 65 SESRPLSKTKTWSLVKIEERAS 86
>gi|389807458|ref|ZP_10204128.1| 30S ribosomal protein S17 [Rhodanobacter thiooxydans LCS2]
gi|388444081|gb|EIM00202.1| 30S ribosomal protein S17 [Rhodanobacter thiooxydans LCS2]
Length = 86
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 53 RGRILAGTCHSAKMNRTI--IVRRNYLHFV--KKYQRYEKRHSNIPAHISPCFRVKEGDH 108
+ R L G S KM++T+ +V R H++ K +R K H+ EGD
Sbjct: 7 QARTLEGRVTSNKMDKTVTVLVERQEQHWLLGKTIRRSTKLHA------QDDLGANEGDI 60
Query: 109 VIIGQCRPLSKTVRFNVLKVI 129
V I +CRPLSKT V+++I
Sbjct: 61 VRIAECRPLSKTKHHRVVEII 81
>gi|399543662|ref|YP_006556970.1| 30S ribosomal protein S17 [Marinobacter sp. BSs20148]
gi|399158994|gb|AFP29557.1| 30S ribosomal protein S17 [Marinobacter sp. BSs20148]
Length = 88
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 54 GRILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVII 111
R L+G S KM ++I+V R H + Y +Y KR + I AH + GD VII
Sbjct: 8 ARTLSGKVVSNKMEKSIVVLVERQVKHPL--YGKYMKRSTKIHAH-DESNQCNIGDTVII 64
Query: 112 GQCRPLSKTVRFNVLKVIPAGS 133
+ RP+SKT + +++V S
Sbjct: 65 KETRPVSKTKSWALVEVTDHAS 86
>gi|381153123|ref|ZP_09864992.1| 30S ribosomal protein S17 [Methylomicrobium album BG8]
gi|380885095|gb|EIC30972.1| 30S ribosomal protein S17 [Methylomicrobium album BG8]
Length = 87
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R + G S KM++TI +V R H V Y +Y KR + + AH +EGD V I
Sbjct: 9 RTITGRVVSNKMDKTITVLVERVVKHPV--YGKYVKRSTKMMAHDENNV-CQEGDVVSIT 65
Query: 113 QCRPLSKTVRFNVLKVIPAGS 133
CRPLS+ F +++V+ + +
Sbjct: 66 SCRPLSRHKTFKLVEVLESAN 86
>gi|333985451|ref|YP_004514661.1| 30S ribosomal protein S17 [Methylomonas methanica MC09]
gi|333809492|gb|AEG02162.1| 30S ribosomal protein S17 [Methylomonas methanica MC09]
Length = 87
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R + G S KM++T+ +V R H V Y +Y KR + H + EGD V I
Sbjct: 9 RTVTGRVVSNKMDKTVSVLVERLVKHPV--YGKYVKRSTKFLVH-DENNQCNEGDIVSIT 65
Query: 113 QCRPLSKTVRFNVLKVIPAGS 133
CRPLSK F +++V+ A +
Sbjct: 66 SCRPLSKNKTFKLVEVLEASN 86
>gi|254785088|ref|YP_003072516.1| 30S ribosomal protein S17 [Teredinibacter turnerae T7901]
gi|259494797|sp|C5BQ70.1|RS17_TERTT RecName: Full=30S ribosomal protein S17
gi|237687395|gb|ACR14659.1| ribosomal protein S17 [Teredinibacter turnerae T7901]
Length = 88
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 55 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G S KM+++++V R H V Y +Y + + I AH +GD V I
Sbjct: 9 RTLTGKVVSDKMDKSVVVLIERRVKHPV--YGKYVSKSTKIKAH-DENNECNQGDTVTIA 65
Query: 113 QCRPLSKTVRFNVLKV 128
+ RPLSKT + ++K+
Sbjct: 66 ESRPLSKTKSWTLVKI 81
>gi|427703078|ref|YP_007046300.1| 30S ribosomal protein S17 [Cyanobium gracile PCC 6307]
gi|427346246|gb|AFY28959.1| 30S ribosomal protein S17 [Cyanobium gracile PCC 6307]
Length = 83
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 59 GTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRP 116
GT S KM++T++V + H + YQ+ +R + AH + GD V I + RP
Sbjct: 8 GTVVSDKMDKTVVVAVENRFPHPI--YQKTVRRTTRYKAH-DEANSCRVGDRVRITETRP 64
Query: 117 LSKTVRFNVLKVIPAGSSG 135
LS+T R+ V +V+ S+G
Sbjct: 65 LSRTKRWAVAEVLSTTSAG 83
>gi|407776114|ref|ZP_11123403.1| 30S ribosomal protein S17 [Thalassospira profundimaris WP0211]
gi|407280830|gb|EKF06397.1| 30S ribosomal protein S17 [Thalassospira profundimaris WP0211]
Length = 77
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 55 RILAGTCHSAKMNRTIIVR--RNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R+L GT S K ++T++VR R +H + Y++Y ++ AH R K GD V I
Sbjct: 4 RVLQGTVVSTKNDKTVVVRVERQVMHPL--YKKYVRKSKKFHAHDEEN-RFKTGDVVRIR 60
Query: 113 QCRPLSKTVRFNVL 126
+C+P+SK + V+
Sbjct: 61 ECKPISKLKSWEVV 74
>gi|126666804|ref|ZP_01737781.1| 30S ribosomal protein S17 [Marinobacter sp. ELB17]
gi|126628849|gb|EAZ99469.1| 30S ribosomal protein S17 [Marinobacter sp. ELB17]
Length = 88
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 54 GRILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVII 111
R L+G S KM ++I+V R H + Y +Y KR + I AH + GD VII
Sbjct: 8 ARTLSGKVVSNKMEKSIVVLVERQVKHPL--YGKYMKRSTKIHAH-DESNQCNIGDTVII 64
Query: 112 GQCRPLSKTVRFNVLKVIPAGS 133
+ RP+SKT + +++V S
Sbjct: 65 KETRPVSKTKSWALVEVTEHAS 86
>gi|410696294|gb|AFV75362.1| 30S ribosomal protein S17 [Thermus oshimai JL-2]
Length = 105
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
++L G S KM +T+ +V R + H + Y + KR AH P K GD V I
Sbjct: 4 KVLTGVVVSDKMQKTVAVLVERQFPHPL--YGKVIKRSKKYLAH-DPNDEYKVGDVVEII 60
Query: 113 QCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
+ RP+SK RF VL+ + G +K
Sbjct: 61 EARPISKRKRFRVLRRVEEGRMDLVEKYLV 90
>gi|352086283|ref|ZP_08953824.1| 30S ribosomal protein S17 [Rhodanobacter sp. 2APBS1]
gi|389799007|ref|ZP_10202013.1| 30S ribosomal protein S17 [Rhodanobacter sp. 116-2]
gi|351679582|gb|EHA62719.1| 30S ribosomal protein S17 [Rhodanobacter sp. 2APBS1]
gi|388443933|gb|EIM00064.1| 30S ribosomal protein S17 [Rhodanobacter sp. 116-2]
Length = 86
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 10/79 (12%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFV--KKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
R L G S KM++T+ +V R H++ K +R K H+ EGD V
Sbjct: 9 RTLEGRVTSNKMDKTVTVLVERQEQHWLLGKTIRRSTKLHA------QDDLGANEGDLVR 62
Query: 111 IGQCRPLSKTVRFNVLKVI 129
I +CRPLSKT V+++I
Sbjct: 63 IAECRPLSKTKHHRVVEII 81
>gi|256821671|ref|YP_003145634.1| 30S ribosomal protein S17 [Kangiella koreensis DSM 16069]
gi|256795210|gb|ACV25866.1| ribosomal protein S17 [Kangiella koreensis DSM 16069]
Length = 85
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 55 RILAGTCHSAKMNR--TIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G S KM++ T+++ R H + Y ++ KR + I AH K GD V I
Sbjct: 8 RTLQGKVISDKMDKSITVLIERQVKHPL--YGKFIKRSTKIHAH-DETNECKTGDVVRIV 64
Query: 113 QCRPLSKTVRFNVLKVI 129
+CRP+SK+ F +++++
Sbjct: 65 ECRPISKSKSFKLVEIV 81
>gi|84394581|ref|ZP_00993285.1| ribosomal protein S17 [Vibrio splendidus 12B01]
gi|407070230|ref|ZP_11101068.1| 30S ribosomal protein S17 [Vibrio cyclitrophicus ZF14]
gi|84374801|gb|EAP91744.1| ribosomal protein S17 [Vibrio splendidus 12B01]
Length = 84
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 54 GRILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHI--SPCFRVKEGDHV 109
RI G S KM+++I+V R H + Y ++ KR + + AH + C GD V
Sbjct: 5 NRIQQGRVVSDKMDKSIVVAIERTVKHPI--YGKFIKRTTKVHAHDEDNTCGL---GDKV 59
Query: 110 IIGQCRPLSKTVRFNVLKVI 129
I +CRPLSKT + ++KV+
Sbjct: 60 EIAECRPLSKTKSWTLVKVL 79
>gi|418201536|ref|ZP_12837968.1| 30S ribosomal protein S17 [Streptococcus pneumoniae GA52306]
gi|353869012|gb|EHE48895.1| 30S ribosomal protein S17 [Streptococcus pneumoniae GA52306]
Length = 86
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 21/88 (23%)
Query: 55 RILAGTCHSAKMNRTIIV----RRNY------LHFVKKYQRYEKRHSNIPAHISPCFRVK 104
++L G S KM++TI V +RN+ +++ KKY+ +++ +N+ VK
Sbjct: 7 KVLVGRVVSDKMDKTITVVVETKRNHPVYGKRINYSKKYKAHDE--NNV---------VK 55
Query: 105 EGDHVIIGQCRPLSKTVRFNVLKVIPAG 132
EGD V I + RPLS T RF +++V+
Sbjct: 56 EGDIVRIMETRPLSATKRFRLVEVVEEA 83
>gi|344200778|ref|YP_004785104.1| 30S ribosomal protein S17 [Acidithiobacillus ferrivorans SS3]
gi|343776222|gb|AEM48778.1| 30S ribosomal protein S17 [Acidithiobacillus ferrivorans SS3]
Length = 91
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 55 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L GT S M++TI+V R H + Y++Y +R AH + + GD V I
Sbjct: 8 RSLVGTVVSNLMDKTIVVNVERRIQHPL--YKKYIRRSKKFHAHDAE-NTCQIGDTVKIE 64
Query: 113 QCRPLSKTVRFNVLKVIPAGSSGG 136
+CRPLSKT + ++ V+ G G
Sbjct: 65 ECRPLSKTKSWRLVNVLAQGIVEG 88
>gi|395789491|ref|ZP_10469011.1| 30S ribosomal protein S17 [Bartonella taylorii 8TBB]
gi|395430034|gb|EJF96086.1| 30S ribosomal protein S17 [Bartonella taylorii 8TBB]
Length = 79
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 55 RILAGTCHSAKMNRTIIVR--RNYLH-FVKKYQRYEKRHSNIPAHISPCFRVKEGDHVII 111
RIL G S K ++T++V+ R Y H +KK R K++ AH + K GD V I
Sbjct: 4 RILQGVVVSDKSDKTVVVKVERRYSHPLLKKTVRQSKKYK---AH-DESNQFKIGDQVSI 59
Query: 112 GQCRPLSKTVRFNVLK 127
+ RP+SK R+ V K
Sbjct: 60 QESRPISKDKRWTVFK 75
>gi|119502933|ref|ZP_01625018.1| 30S ribosomal protein S17 [marine gamma proteobacterium HTCC2080]
gi|119461279|gb|EAW42369.1| 30S ribosomal protein S17 [marine gamma proteobacterium HTCC2080]
Length = 88
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 53 RGRILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
R R+L G S KMN+TI ++ R H V ++ R S + AH GD V
Sbjct: 7 RTRVLQGRVVSDKMNKTITVLIERRVKHPV--VGKFITRSSKVHAH-DENNTAGMGDLVT 63
Query: 111 IGQCRPLSKTVRFNVLKVIPAGS 133
+ + RPLSKT + +++V+ A +
Sbjct: 64 VAESRPLSKTKTWALVEVVEAAT 86
>gi|336450129|ref|ZP_08620585.1| 30S ribosomal protein S17 [Idiomarina sp. A28L]
gi|336282947|gb|EGN76157.1| 30S ribosomal protein S17 [Idiomarina sp. A28L]
Length = 87
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 55 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G S KM+++I+V R H + Y +Y KR + + AH KEGD V I
Sbjct: 8 RTLQGRVVSDKMDKSIVVAIERKVKHPL--YGKYIKRTTKVHAHDEENTS-KEGDLVSIR 64
Query: 113 QCRPLSKTVRFNVLKVIPAGS 133
+ RP+SKT + +++V+ S
Sbjct: 65 ETRPVSKTKSWALVEVLERSS 85
>gi|451980692|ref|ZP_21929078.1| 30S ribosomal protein S17 [Nitrospina gracilis 3/211]
gi|451762028|emb|CCQ90317.1| 30S ribosomal protein S17 [Nitrospina gracilis 3/211]
Length = 86
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 53 RGRILAGTCHSAKMNRTIIVR--RNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
R + L GT S KM++T++VR R Y+H K+++ K+ H + GD +
Sbjct: 6 RKQTLLGTVISDKMDKTVVVRVDRKYIH--PKFKKVVKQTRKYKCH-DETNQCNVGDFIS 62
Query: 111 IGQCRPLSKTVRFNVLKVI 129
+ Q RPLSK R+++++++
Sbjct: 63 MKQVRPLSKDKRWSLVEIL 81
>gi|218710740|ref|YP_002418361.1| 30S ribosomal protein S17 [Vibrio splendidus LGP32]
gi|254765399|sp|B7VLE8.1|RS17_VIBSL RecName: Full=30S ribosomal protein S17
gi|218323759|emb|CAV20115.1| ribosomal protein S17 [Vibrio splendidus LGP32]
Length = 84
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 54 GRILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHI--SPCFRVKEGDHV 109
RI G S KM+++I+V R H + Y ++ KR + + AH + C GD V
Sbjct: 5 NRIQQGRVISDKMDKSIVVAIERTVKHPI--YGKFIKRTTKVHAHDEDNTCGL---GDKV 59
Query: 110 IIGQCRPLSKTVRFNVLKVI 129
I +CRPLSKT + ++KV+
Sbjct: 60 EIAECRPLSKTKSWTLVKVL 79
>gi|389780938|ref|ZP_10194414.1| 30S ribosomal protein S17 [Rhodanobacter spathiphylli B39]
gi|388435599|gb|EIL92497.1| 30S ribosomal protein S17 [Rhodanobacter spathiphylli B39]
Length = 91
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 53 RGRILAGTCHSAKMNRTI--IVRRNYLHFV--KKYQRYEKRHSNIPAHISPCFRVKEGDH 108
+ R L G S KM++T+ +V R H++ K +R K H+ EGD
Sbjct: 12 QARTLEGRVTSNKMDKTVTVLVERQEQHWLLGKIIRRSTKLHA------QDDLGANEGDL 65
Query: 109 VIIGQCRPLSKTVRFNVLKVI 129
V I +CRPLSKT V+++I
Sbjct: 66 VRIAECRPLSKTKHHRVVEII 86
>gi|387813026|ref|YP_005428507.1| 30S ribosomal protein S17 [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381338037|emb|CCG94084.1| 30S ribosomal subunit protein S17 [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 88
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 54 GRILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVII 111
R L+G S KM+++I+V R H + Y +Y KR + I AH + GD V I
Sbjct: 8 ARTLSGKVVSNKMDKSIVVLVERQVKHPL--YGKYMKRSTKIHAH-DESNQCNTGDTVTI 64
Query: 112 GQCRPLSKTVRFNVLKV 128
+ RP+SKT + +++V
Sbjct: 65 QETRPVSKTKSWALVEV 81
>gi|414174068|ref|ZP_11428695.1| 30S ribosomal protein S17 [Afipia broomeae ATCC 49717]
gi|410890702|gb|EKS38501.1| 30S ribosomal protein S17 [Afipia broomeae ATCC 49717]
Length = 81
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 55 RILAGTCHSAKMNRTIIVR--RNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G S K ++TI+VR R + H + Y++ +R N AH + K GD V I
Sbjct: 4 RTLQGVVVSDKQDKTIVVRVDRRFTHPI--YKKTIRRSKNYHAH-DENNQFKAGDTVWIE 60
Query: 113 QCRPLSKTVRFNVLK 127
+ +PLSK R+ V++
Sbjct: 61 ESKPLSKLKRWTVVQ 75
>gi|146278559|ref|YP_001168718.1| 30S ribosomal protein S17 [Rhodobacter sphaeroides ATCC 17025]
gi|166220847|sp|A4WVJ9.1|RS17_RHOS5 RecName: Full=30S ribosomal protein S17
gi|145556800|gb|ABP71413.1| SSU ribosomal protein S17P [Rhodobacter sphaeroides ATCC 17025]
Length = 80
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLH-FVKKYQRYEKRHSNIPAHISPCFRVKEGDHVII 111
RIL GT S K +T+ +V R + H +KK R K++ AH P + K GD V I
Sbjct: 4 RILQGTVTSDKNEQTVTVLVERRFKHPLLKKTVRLSKKYR---AH-DPENQFKVGDVVRI 59
Query: 112 GQCRPLSKTVRFNVL 126
+C P+SKT R+ V+
Sbjct: 60 EECAPISKTKRWKVV 74
>gi|414162156|ref|ZP_11418403.1| 30S ribosomal protein S17 [Afipia felis ATCC 53690]
gi|410879936|gb|EKS27776.1| 30S ribosomal protein S17 [Afipia felis ATCC 53690]
Length = 82
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 55 RILAGTCHSAKMNRTIIVR--RNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G S K ++TI+VR R + H + Y++ +R N AH K GD V I
Sbjct: 4 RTLQGVVVSDKQDKTIVVRVDRRFTHPI--YKKTIRRSKNYHAH-DENNEFKAGDTVWIE 60
Query: 113 QCRPLSKTVRFNVLK 127
+ +PLSK R+ V++
Sbjct: 61 ESKPLSKLKRWTVVR 75
>gi|406969020|gb|EKD93746.1| hypothetical protein ACD_28C00063G0002 [uncultured bacterium]
Length = 82
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 59 GTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLS 118
G SAK ++TI+VR + KY++ + + AH + KEGD V I + RPLS
Sbjct: 6 GIVISAKNDKTIVVRVDMYKAHPKYKKRYRTSTKFHAH-DEGNQYKEGDTVTIYESRPLS 64
Query: 119 KTVRFNVLK 127
+ R+NV K
Sbjct: 65 RMKRWNVEK 73
>gi|444921184|ref|ZP_21241022.1| 30S ribosomal protein S17 [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507920|gb|ELV08094.1| 30S ribosomal protein S17 [Wohlfahrtiimonas chitiniclastica SH04]
Length = 88
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R + GT S KM++TI +V R H + Y +Y KR + AH K GD V I
Sbjct: 10 RTVVGTVSSDKMDKTITVLVERLVKHPI--YGKYIKRSTKFHAHDENNI-CKVGDVVEIK 66
Query: 113 QCRPLSKTVRFNVLKVIPAG 132
Q RP+SK + ++KVI
Sbjct: 67 QSRPMSKLKSWELVKVIEEA 86
>gi|384081784|ref|ZP_09992959.1| 30S ribosomal protein S17 [gamma proteobacterium HIMB30]
Length = 88
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 114
R L+G S+K ++TI V Y +Y KR S I AH + GD V I +C
Sbjct: 9 RTLSGKVVSSKGDKTISVLVERFEKHPLYGKYVKRSSKIAAH-DENNDCQIGDTVTISEC 67
Query: 115 RPLSKTVRFNVLKV 128
RPLSK+ + ++++
Sbjct: 68 RPLSKSKAYRLVEI 81
>gi|220903943|ref|YP_002479255.1| 30S ribosomal protein S17 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868242|gb|ACL48577.1| ribosomal protein S17 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 87
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 53 RGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
+GR L G S K ++TI+VR L ++Y +R AH P GD V I
Sbjct: 8 KGRTLTGIVVSDKNDKTIVVRVETLVKHPLLKKYVRRRKKFTAH-DPMNECGMGDKVKIV 66
Query: 113 QCRPLSKTVRFNVLKVI 129
+ RPLS+ R++++ +I
Sbjct: 67 EFRPLSRNKRWHLVSII 83
>gi|167626030|ref|YP_001676324.1| 30S ribosomal protein S17 [Shewanella halifaxensis HAW-EB4]
gi|189029658|sp|B0TM03.1|RS17_SHEHH RecName: Full=30S ribosomal protein S17
gi|167356052|gb|ABZ78665.1| ribosomal protein S17 [Shewanella halifaxensis HAW-EB4]
Length = 82
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 55 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G S KM+++I V R H + Y ++ KR + I AH + GD V I
Sbjct: 6 RTLQGRVLSDKMDKSITVAIERKVKHPL--YGKFIKRTTKIHAH-DEQNQCNAGDLVTIR 62
Query: 113 QCRPLSKTVRFNVLKVI 129
+CRPLSKT + +++VI
Sbjct: 63 ECRPLSKTKSWTLVEVI 79
>gi|149376675|ref|ZP_01894434.1| 30S ribosomal protein S17 [Marinobacter algicola DG893]
gi|149359048|gb|EDM47513.1| 30S ribosomal protein S17 [Marinobacter algicola DG893]
Length = 88
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 54 GRILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVII 111
R L+G S KM ++I+V R H + Y +Y KR S I AH + GD V I
Sbjct: 8 ARTLSGKVVSNKMEKSIVVLVERQVKHPL--YGKYMKRSSKIHAH-DESNQCNIGDTVTI 64
Query: 112 GQCRPLSKTVRFNVLKVIPAGS 133
+ RP+SKT + +++V S
Sbjct: 65 QETRPVSKTKSWALVEVTERAS 86
>gi|197117332|ref|YP_002137759.1| 30S ribosomal protein S17 [Geobacter bemidjiensis Bem]
gi|226697980|sp|B5EFQ9.1|RS17_GEOBB RecName: Full=30S ribosomal protein S17
gi|197086692|gb|ACH37963.1| ribosomal protein S17 [Geobacter bemidjiensis Bem]
Length = 85
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 58 AGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPL 117
G S KM++T +V+ + L Y +Y KR + AH K GD V+I + RPL
Sbjct: 11 VGVVVSDKMDKTAVVKVDRLVKHPVYNKYIKRSAKYKAHDMDNA-AKIGDRVLIVETRPL 69
Query: 118 SKTVRFNVLKVIPA 131
SK R+ + ++I +
Sbjct: 70 SKDKRWKIRQIIES 83
>gi|344344813|ref|ZP_08775672.1| 30S ribosomal protein S17 [Marichromatium purpuratum 984]
gi|343803507|gb|EGV21414.1| 30S ribosomal protein S17 [Marichromatium purpuratum 984]
Length = 86
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 54 GRILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVII 111
RI G S+ M++T+ ++ R H + Y ++ +R + I AH +GD V +
Sbjct: 8 NRIQEGRVISSAMDKTVTVLIERRVKHPL--YGKFMRRSTKIHAHDEENT-CNQGDLVRV 64
Query: 112 GQCRPLSKTVRFNVLKVIPAG 132
QCRPLSKT + +L+VI
Sbjct: 65 EQCRPLSKTKTWRLLEVIEKA 85
>gi|284042813|ref|YP_003393153.1| 30S ribosomal protein S17 [Conexibacter woesei DSM 14684]
gi|283947034|gb|ADB49778.1| 30S ribosomal protein S17 [Conexibacter woesei DSM 14684]
Length = 190
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 53 RGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEK---RHSNIPAHISPCFRVKEGDHV 109
R ++ G S K ++TI VR + ++++RYEK + + AH GD V
Sbjct: 111 RQKLRQGVVISDKADKTITVR---IDMARRHRRYEKIVRSSTTLHAH-DESNDANAGDTV 166
Query: 110 IIGQCRPLSKTVRFNVLKVI 129
II + RPLS+ R+ +++V+
Sbjct: 167 IIRESRPLSRLKRWRLVEVV 186
>gi|90414965|ref|ZP_01222927.1| putative ribosomal protein S17 [Photobacterium profundum 3TCK]
gi|90323904|gb|EAS40504.1| putative ribosomal protein S17 [Photobacterium profundum 3TCK]
Length = 84
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 50 VSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHV 109
+S + RI G S+KM+++I+V + Y +Y KR + + AH GD V
Sbjct: 1 MSEQTRIQLGRVISSKMDKSIVVAIERMVKHPMYGKYIKRTTKLHAH-DENNECNLGDTV 59
Query: 110 IIGQCRPLSKTVRFNVLKVI 129
+ +CRPLSKT + +++V+
Sbjct: 60 EVRECRPLSKTKSWTLVRVV 79
>gi|77462268|ref|YP_351772.1| 30S ribosomal protein S17 [Rhodobacter sphaeroides 2.4.1]
gi|126461144|ref|YP_001042258.1| 30S ribosomal protein S17 [Rhodobacter sphaeroides ATCC 17029]
gi|221638122|ref|YP_002524384.1| 30S ribosomal protein S17 [Rhodobacter sphaeroides KD131]
gi|332560149|ref|ZP_08414471.1| 30S ribosomal protein S17 [Rhodobacter sphaeroides WS8N]
gi|429207701|ref|ZP_19198957.1| SSU ribosomal protein S17p (S11e) [Rhodobacter sp. AKP1]
gi|94730542|sp|Q3J5R3.1|RS17_RHOS4 RecName: Full=30S ribosomal protein S17
gi|166219727|sp|A3PGM0.1|RS17_RHOS1 RecName: Full=30S ribosomal protein S17
gi|254811374|sp|B9KLA0.1|RS17_RHOSK RecName: Full=30S ribosomal protein S17
gi|77386686|gb|ABA77871.1| SSU ribosomal protein S17P [Rhodobacter sphaeroides 2.4.1]
gi|126102808|gb|ABN75486.1| SSU ribosomal protein S17P [Rhodobacter sphaeroides ATCC 17029]
gi|221158903|gb|ACL99882.1| 30S ribosomal protein S17 [Rhodobacter sphaeroides KD131]
gi|332277861|gb|EGJ23176.1| 30S ribosomal protein S17 [Rhodobacter sphaeroides WS8N]
gi|428189094|gb|EKX57650.1| SSU ribosomal protein S17p (S11e) [Rhodobacter sp. AKP1]
Length = 80
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLH-FVKKYQRYEKRHSNIPAHISPCFRVKEGDHVII 111
RIL GT S K +T+ +V R + H +KK R K++ AH P + K GD V I
Sbjct: 4 RILQGTVTSDKNEQTVTVLVERRFKHPLLKKTVRLSKKYR---AH-DPENQFKVGDIVRI 59
Query: 112 GQCRPLSKTVRFNVL 126
+C P+SKT R+ V+
Sbjct: 60 EECAPISKTKRWKVV 74
>gi|261250408|ref|ZP_05942983.1| SSU ribosomal protein S17p (S11e) [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|417953697|ref|ZP_12596740.1| 30S ribosomal protein S17 [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|260938977|gb|EEX94964.1| SSU ribosomal protein S17p (S11e) [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342816813|gb|EGU51706.1| 30S ribosomal protein S17 [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 84
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 55 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R G S KM+++I+V R H + Y +Y KR + + AH GD+V I
Sbjct: 6 RTQQGRVVSDKMDKSIVVAIERMVKHPI--YGKYVKRTTKVHAH-DENNECGLGDNVEIA 62
Query: 113 QCRPLSKTVRFNVLKVI 129
+CRP+SKT + ++KV+
Sbjct: 63 ECRPMSKTKSWTLVKVL 79
>gi|299135248|ref|ZP_07028439.1| 30S ribosomal protein S17 [Afipia sp. 1NLS2]
gi|298590225|gb|EFI50429.1| 30S ribosomal protein S17 [Afipia sp. 1NLS2]
Length = 82
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 55 RILAGTCHSAKMNRTIIVR--RNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G S K ++T++VR R + H + Y++ +R N AH + K GD V I
Sbjct: 4 RTLQGVVVSDKQDKTVVVRVDRRFTHPI--YKKTIRRSKNYHAH-DENNQFKAGDTVWIE 60
Query: 113 QCRPLSKTVRFNVLK 127
+ +PLSK R+ V++
Sbjct: 61 ESKPLSKLKRWTVVR 75
>gi|281422242|ref|ZP_06253241.1| 30S ribosomal protein S17 [Prevotella copri DSM 18205]
gi|281403747|gb|EFB34427.1| 30S ribosomal protein S17 [Prevotella copri DSM 18205]
Length = 88
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 15/82 (18%)
Query: 55 RILAGTCHSAKMNRTIIVRRNY--LH-----FVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
++ G S KM++TI++ + +H FV+K ++Y N A++ GD
Sbjct: 11 KVRQGVVISNKMDKTIVIAAKFKEMHPIYGKFVQKTKKYHAHDENNEANV--------GD 62
Query: 108 HVIIGQCRPLSKTVRFNVLKVI 129
V+I + RPLSKT R+ +++++
Sbjct: 63 TVMIMETRPLSKTKRWRLVQIV 84
>gi|150396216|ref|YP_001326683.1| 30S ribosomal protein S17 [Sinorhizobium medicae WSM419]
gi|166220900|sp|A6U868.1|RS17_SINMW RecName: Full=30S ribosomal protein S17
gi|150027731|gb|ABR59848.1| ribosomal protein S17 [Sinorhizobium medicae WSM419]
Length = 78
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 55 RILAGTCHSAKMNRTIIVR--RNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
RIL GT S K ++T++VR R + H + Q+ +R AH + K GD V I
Sbjct: 4 RILQGTVVSDKNDKTVVVRVERRFAHPI--LQKTVRRSKKYKAH-DESNQFKVGDLVSIE 60
Query: 113 QCRPLSKTVRFNVL 126
+C P+SK R+ V+
Sbjct: 61 ECAPISKDKRWTVV 74
>gi|406881490|gb|EKD29539.1| 30S ribosomal protein S17 [uncultured bacterium (gcode 4)]
Length = 75
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH--ISPCFRVKEGDHVIIG 112
R GT S KM++TI+V + KY++ K S AH ++ C G V I
Sbjct: 2 RTQTGTVTSIKMDKTIVVTVDTYKVHPKYKKRYKASSKFYAHDELNSCTL---GQEVTIE 58
Query: 113 QCRPLSKTVRFNVL 126
+ RPLSKT R+ ++
Sbjct: 59 ETRPLSKTKRWKII 72
>gi|310941084|dbj|BAJ24416.1| 30S ribosomal protein S17 [Pseudomonas putida]
gi|310941615|dbj|BAJ24161.1| 30S ribosomal protein S17 [Pseudomonas putida]
gi|310941795|dbj|BAJ24251.1| 30S ribosomal protein S17 [Pseudomonas fulva]
Length = 88
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G S KM++TI ++ R H + Y +Y KR + + AH + K GD V I
Sbjct: 9 RTLTGRVVSDKMDKTITVLIERRVKHPI--YGKYVKRSTKLHAH-DETNQCKIGDKVSIT 65
Query: 113 QCRPLSKTVRFNVLKVI 129
+ RPL+KT + +++V+
Sbjct: 66 ETRPLAKTKSWALVEVL 82
>gi|206890438|ref|YP_002249236.1| 30S ribosomal protein S17 [Thermodesulfovibrio yellowstonii DSM
11347]
gi|226698038|sp|B5YG38.1|RS17_THEYD RecName: Full=30S ribosomal protein S17
gi|206742376|gb|ACI21433.1| ribosomal protein S17 [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 83
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 55 RILAGTCHSAKMNRTII--VRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
+IL GT S KM++T++ V R + H + Y++ K AH + GD V I
Sbjct: 4 KILKGTVVSDKMDKTVVVSVERVFQHPL--YKKTIKTRKKYKAHDEENI-CQLGDMVEII 60
Query: 113 QCRPLSKTVRFNVLKVIPAGSS 134
+ P+SKT R+ VL+++ G +
Sbjct: 61 ESSPISKTKRWKVLRIVKEGDT 82
>gi|344337600|ref|ZP_08768534.1| 30S ribosomal protein S17 [Thiocapsa marina 5811]
gi|343802553|gb|EGV20493.1| 30S ribosomal protein S17 [Thiocapsa marina 5811]
Length = 90
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 52 IRGRILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHI--SPCFRVKEGD 107
I R L G S+ M++T+ ++ R H + Y ++ +R + I AH + C GD
Sbjct: 10 INNRTLDGRVTSSAMDKTVTVLIERKVKHPL--YGKFMRRSTKIHAHDEENAC---SAGD 64
Query: 108 HVIIGQCRPLSKTVRFNVLKVI 129
V + QCRPLSKT + ++++I
Sbjct: 65 LVRVEQCRPLSKTKTWRLIEII 86
>gi|269925840|ref|YP_003322463.1| 30S ribosomal protein S17 [Thermobaculum terrenum ATCC BAA-798]
gi|269789500|gb|ACZ41641.1| ribosomal protein S17 [Thermobaculum terrenum ATCC BAA-798]
Length = 85
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 53 RGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R +I G S KM++T++V YL Y + +R AH K GD V I
Sbjct: 6 RRQIKVGQVVSDKMDKTVVVAVTYLKKHPLYHKTVRRVRRFKAH-DENNEAKVGDIVRII 64
Query: 113 QCRPLSKTVRFNVLKVIPAG 132
+ RPLSK R+ VL ++ G
Sbjct: 65 ESRPLSKEKRWRVLNILERG 84
>gi|375090150|ref|ZP_09736468.1| 30S ribosomal protein S17 [Facklamia languida CCUG 37842]
gi|374565841|gb|EHR37100.1| 30S ribosomal protein S17 [Facklamia languida CCUG 37842]
Length = 87
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 114
++ G S KM++TI V+ + KY + K AH + KEGD V I +
Sbjct: 8 KVYQGRVVSDKMDKTITVQVDTRKVHPKYGKRVKYSKKYKAH-DELNQAKEGDIVRIMET 66
Query: 115 RPLSKTVRFNVLKVIPAG 132
RPLS T RF +L+++
Sbjct: 67 RPLSATKRFRLLEIVEEA 84
>gi|255020774|ref|ZP_05292832.1| SSU ribosomal protein S17p (S11e) [Acidithiobacillus caldus ATCC
51756]
gi|340781356|ref|YP_004747963.1| 30S ribosomal protein S17p (S11e) [Acidithiobacillus caldus SM-1]
gi|254969770|gb|EET27274.1| SSU ribosomal protein S17p (S11e) [Acidithiobacillus caldus ATCC
51756]
gi|340555509|gb|AEK57263.1| SSU ribosomal protein S17p (S11e) [Acidithiobacillus caldus SM-1]
Length = 91
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 55 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISP-CFRVKEGDHVII 111
R L G S +M++TI+V R H + Y++Y +R AH + R+ GD V I
Sbjct: 8 RSLVGKVVSNRMDKTIVVTVERRVQHPL--YKKYIRRSKKFHAHDAENTCRI--GDTVRI 63
Query: 112 GQCRPLSKTVRFNVLKVIPAGSSGGAK 138
+CRPLSKT + ++ VI G +
Sbjct: 64 EECRPLSKTKTWRLVTVISEAIEEGVQ 90
>gi|118579128|ref|YP_900378.1| 30S ribosomal protein S17 [Pelobacter propionicus DSM 2379]
gi|166219716|sp|A1ALV0.1|RS17_PELPD RecName: Full=30S ribosomal protein S17
gi|118501838|gb|ABK98320.1| SSU ribosomal protein S17P [Pelobacter propionicus DSM 2379]
Length = 82
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 114
R G S KM++T++V+ + L Y +Y KR + H K GD V I +C
Sbjct: 8 RTQNGVVVSDKMDKTVVVKVDRLIKHPVYNKYIKRSAKYKVHDENNV-CKIGDRVQIIEC 66
Query: 115 RPLSKTVRFNVLKV 128
RPLSK R+N+ ++
Sbjct: 67 RPLSKDKRWNLKQI 80
>gi|338975030|ref|ZP_08630385.1| SSU ribosomal protein S17p [Bradyrhizobiaceae bacterium SG-6C]
gi|414167342|ref|ZP_11423571.1| 30S ribosomal protein S17 [Afipia clevelandensis ATCC 49720]
gi|338231629|gb|EGP06764.1| SSU ribosomal protein S17p [Bradyrhizobiaceae bacterium SG-6C]
gi|410891159|gb|EKS38957.1| 30S ribosomal protein S17 [Afipia clevelandensis ATCC 49720]
Length = 82
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 55 RILAGTCHSAKMNRTIIVR--RNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G S K ++T++VR R + H + Y++ +R N AH + K GD V I
Sbjct: 4 RTLQGVVVSDKQDKTVVVRVDRRFTHPI--YKKTIRRSKNYHAH-DENNQFKAGDTVWIE 60
Query: 113 QCRPLSKTVRFNVLK 127
+ +PLSK R+ V++
Sbjct: 61 ESKPLSKLKRWTVVQ 75
>gi|325272016|ref|ZP_08138460.1| 30S ribosomal protein S17 [Pseudomonas sp. TJI-51]
gi|324102847|gb|EGC00250.1| 30S ribosomal protein S17 [Pseudomonas sp. TJI-51]
Length = 90
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G S KM++TI ++ R H + Y +Y KR + + AH + K GD V I
Sbjct: 11 RTLTGRVVSDKMDKTITVLIERRVKHPI--YGKYVKRSTKLHAH-DETNQCKIGDKVSIT 67
Query: 113 QCRPLSKTVRFNVLKVI 129
+ RPL+KT + +++V+
Sbjct: 68 ETRPLAKTKSWALVEVL 84
>gi|258651372|ref|YP_003200528.1| 30S ribosomal protein S17 [Nakamurella multipartita DSM 44233]
gi|258554597|gb|ACV77539.1| ribosomal protein S17 [Nakamurella multipartita DSM 44233]
Length = 107
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 59 GTCHSAKMNRTIIVRRNYLHFVKKYQRYEK---RHSNIPAHISPCFRVKEGDHVIIGQCR 115
G S KMN+TI+V L K+ RY K R + + AH GD V++ + R
Sbjct: 34 GLVVSDKMNKTIVV---ALEDRVKHPRYSKVIRRTTKVKAH-DENETAGIGDRVLLAETR 89
Query: 116 PLSKTVRFNVLKVI 129
PLS T R+ ++KV+
Sbjct: 90 PLSATKRWRLVKVL 103
>gi|15618548|ref|NP_224834.1| 30S ribosomal protein S17 [Chlamydophila pneumoniae CWL029]
gi|15836170|ref|NP_300694.1| 30S ribosomal protein S17 [Chlamydophila pneumoniae J138]
gi|16752402|ref|NP_444661.1| 30S ribosomal protein S17 [Chlamydophila pneumoniae AR39]
gi|33241995|ref|NP_876936.1| 30S ribosomal protein S17 [Chlamydophila pneumoniae TW-183]
gi|384449100|ref|YP_005661702.1| 30S ribosomal protein S17 [Chlamydophila pneumoniae LPCoLN]
gi|6831660|sp|Q9Z7R6.1|RS17_CHLPN RecName: Full=30S ribosomal protein S17
gi|4376936|gb|AAD18777.1| S17 Ribosomal Protein [Chlamydophila pneumoniae CWL029]
gi|7189043|gb|AAF37992.1| ribosomal protein S17 [Chlamydophila pneumoniae AR39]
gi|8979010|dbj|BAA98845.1| S17 ribosomal protein [Chlamydophila pneumoniae J138]
gi|33236505|gb|AAP98593.1| ribosomal protein S17 [Chlamydophila pneumoniae TW-183]
gi|269302422|gb|ACZ32522.1| ribosomal protein S17 [Chlamydophila pneumoniae LPCoLN]
Length = 86
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 55 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 114
++ G SAKM +T++VR + +Y + + AH +V EGD V I +
Sbjct: 10 KVKIGVVVSAKMEKTVVVRVERIFSHPQYLKVVRSSKKYYAHTE--LKVSEGDKVKIQET 67
Query: 115 RPLSKTVRFNVLK 127
RPLSK R+ V++
Sbjct: 68 RPLSKLKRWRVIE 80
>gi|127511101|ref|YP_001092298.1| 30S ribosomal protein S17 [Shewanella loihica PV-4]
gi|166220896|sp|A3Q991.1|RS17_SHELP RecName: Full=30S ribosomal protein S17
gi|126636396|gb|ABO22039.1| SSU ribosomal protein S17P [Shewanella loihica PV-4]
Length = 82
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 55 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G S KM+++I V R H + Y ++ KR + I AH + GD V I
Sbjct: 6 RTLQGRVLSNKMDKSITVAIERKVKHPL--YGKFIKRTTKIHAH-DETNQCNAGDIVTIR 62
Query: 113 QCRPLSKTVRFNVLKVI 129
+CRPLSKT + +++V+
Sbjct: 63 ECRPLSKTKSWTLVEVV 79
>gi|90020615|ref|YP_526442.1| 30S ribosomal protein S17 [Saccharophagus degradans 2-40]
gi|118573208|sp|Q21M49.1|RS17_SACD2 RecName: Full=30S ribosomal protein S17
gi|89950215|gb|ABD80230.1| SSU ribosomal protein S17P [Saccharophagus degradans 2-40]
Length = 88
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 55 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G S KM ++I+V R H V Y +Y + + + AH K GD V I
Sbjct: 9 RTLTGKVVSDKMEKSIVVLIERRVKHPV--YGKYVSKSTKMKAH-DEANDCKIGDTVTIA 65
Query: 113 QCRPLSKTVRFNVLKV 128
+ RPLSKT + ++K+
Sbjct: 66 ESRPLSKTKSWTLVKI 81
>gi|227494554|ref|ZP_03924870.1| ribosomal protein S17 [Actinomyces coleocanis DSM 15436]
gi|226832288|gb|EEH64671.1| ribosomal protein S17 [Actinomyces coleocanis DSM 15436]
Length = 93
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEK---RHSNIPAHISPCFRV 103
T V ++ G S KM++T++V L K+ Y K R + + AH V
Sbjct: 8 TAAVRNDRKVRRGYVVSDKMDKTVVVE---LEDRVKHPLYGKVMTRKNKVKAH-DELNDV 63
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVI 129
EGD+V+I + RPLS T R+ V++VI
Sbjct: 64 HEGDYVLIMETRPLSATKRWRVVEVI 89
>gi|82701909|ref|YP_411475.1| 30S ribosomal protein S17 [Nitrosospira multiformis ATCC 25196]
gi|94730525|sp|Q2YAY8.1|RS17_NITMU RecName: Full=30S ribosomal protein S17
gi|82409974|gb|ABB74083.1| SSU ribosomal protein S17P [Nitrosospira multiformis ATCC 25196]
Length = 88
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 54 GRILAGTCHSAKMNRTI--IVRRNYLH--FVKKYQRYEKRHSNIPAHISPCFRVKEGDHV 109
R L+G S KMN+TI +V R H + K R +K H + A+ GD V
Sbjct: 7 NRTLSGKVVSDKMNKTITVLVERKVKHPLYGKIMVRSKKYHVHDEAN-----EFHTGDVV 61
Query: 110 IIGQCRPLSKTVRFNVLKVI 129
+I +CRPLSKT + V+K++
Sbjct: 62 VIEECRPLSKTKAWRVVKLM 81
>gi|372271998|ref|ZP_09508046.1| 30S ribosomal protein S17 [Marinobacterium stanieri S30]
Length = 87
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 53 RGRILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
R R + G S KM++TI +V R H + Y ++ KR + + AH + GD V
Sbjct: 6 RTRTVTGKVVSDKMDKTITVLVERKEKHPI--YGKFVKRSTKLHAH-DEKNECQMGDLVT 62
Query: 111 IGQCRPLSKTVRFNVLKV 128
I + RPLSKT ++++++
Sbjct: 63 IAESRPLSKTKTWSLIRI 80
>gi|288818155|ref|YP_003432503.1| 30S ribosomal protein S17 [Hydrogenobacter thermophilus TK-6]
gi|384128919|ref|YP_005511532.1| 30S ribosomal protein S17 [Hydrogenobacter thermophilus TK-6]
gi|288787555|dbj|BAI69302.1| ribosomal protein S17 [Hydrogenobacter thermophilus TK-6]
gi|308751756|gb|ADO45239.1| 30S ribosomal protein S17 [Hydrogenobacter thermophilus TK-6]
Length = 87
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 57 LAGTCHSAKMNRTIIVR--RNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 114
GT S KM +T++V+ R H + Y+++ + AH P K GD V+I +
Sbjct: 6 FVGTVISDKMQKTVVVKVDRKVPHPL--YKKHIIKSKKYHAH-DPNNECKVGDTVLIRET 62
Query: 115 RPLSKTVRFNVLKVIPAGSS 134
RPLSKT R+ V+K++ S
Sbjct: 63 RPLSKTKRWVVVKILQRAKS 82
>gi|310941675|dbj|BAJ24191.1| 30S ribosomal protein S17 [Pseudomonas alcaligenes]
Length = 88
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G S KM++TI ++ R H + Y +Y KR + + AH + K GD V I
Sbjct: 9 RTLTGRVVSDKMDKTITVLIERRVKHPI--YGKYVKRSTKLHAH-DESNQCKIGDKVTIR 65
Query: 113 QCRPLSKTVRFNVLKVI 129
+ RPL+KT + +++++
Sbjct: 66 ETRPLAKTKSWALVEIV 82
>gi|222099976|ref|YP_002534544.1| 30S ribosomal protein S17 [Thermotoga neapolitana DSM 4359]
gi|254765395|sp|B9K895.1|RS17_THENN RecName: Full=30S ribosomal protein S17
gi|221572366|gb|ACM23178.1| 30S ribosomal protein S17 [Thermotoga neapolitana DSM 4359]
Length = 112
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 57 LAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 114
+ G S KM++T++V R+ H + Y++Y KR AH + GD V I +
Sbjct: 6 MIGVVVSDKMDKTVVVAVERHVQHPL--YKKYIKRTKKYHAH-DEKNECRVGDVVEIEET 62
Query: 115 RPLSKTVRFNVLKVI 129
RPLSKT R+ V+K+I
Sbjct: 63 RPLSKTKRWRVVKII 77
>gi|312884694|ref|ZP_07744395.1| 30S ribosomal protein S17 [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367607|gb|EFP95158.1| 30S ribosomal protein S17 [Vibrio caribbenthicus ATCC BAA-2122]
Length = 84
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 55 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHI--SPCFRVKEGDHVI 110
R G S KM+++I+V R H + Y +Y KR + + AH + C GD V
Sbjct: 6 RTQQGRVVSDKMDKSIVVAIERMVKHPI--YGKYVKRTTKVHAHDENNDCGL---GDKVE 60
Query: 111 IGQCRPLSKTVRFNVLKVI 129
I +CRPLSKT + ++KV+
Sbjct: 61 IAECRPLSKTKSWTLVKVL 79
>gi|163760808|ref|ZP_02167887.1| 30S ribosomal protein S17 [Hoeflea phototrophica DFL-43]
gi|162281852|gb|EDQ32144.1| 30S ribosomal protein S17 [Hoeflea phototrophica DFL-43]
Length = 79
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 55 RILAGTCHSAKMNRTIIVR--RNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
RIL GT S K +T++VR R + H V ++ +R N AH K GD V I
Sbjct: 4 RILQGTVVSDKNEKTVVVRVERRFAHPV--MRKIVRRTKNYKAH-DENNTCKVGDEVSIQ 60
Query: 113 QCRPLSKTVRFNVLKVIPA 131
+C P+SK R+ V++ A
Sbjct: 61 ECAPISKDKRWTVVEAAQA 79
>gi|88704366|ref|ZP_01102080.1| 30S ribosomal protein S17 [Congregibacter litoralis KT71]
gi|88701417|gb|EAQ98522.1| 30S ribosomal protein S17 [Congregibacter litoralis KT71]
Length = 89
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 53 RGRILAGTCHSAKMNR--TIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
R R + G S KM++ T+++ R H + Y +Y R S + AH + + GD V
Sbjct: 6 RTRTVTGRVVSNKMDKSITVLIERRVRHPM--YGKYMTRSSKVHAHDAE-NQCAIGDLVT 62
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSS 134
+ + RP+SK+ +N+++V+ G +
Sbjct: 63 VAEVRPISKSKTWNLVEVVEKGET 86
>gi|119484824|ref|ZP_01619306.1| 30S ribosomal protein S17 [Lyngbya sp. PCC 8106]
gi|119457642|gb|EAW38766.1| 30S ribosomal protein S17 [Lyngbya sp. PCC 8106]
Length = 82
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 17/89 (19%)
Query: 50 VSIRGRILAGTCHSAKMNRTIIV-------RRNYLHFVKKYQRYEKRHSNIPAHISPCFR 102
++I+ R+ G S KM +T++V R Y V K +RY+ AH +
Sbjct: 1 MAIKERV--GLVVSNKMEKTVVVAIENRSPHRKYGKIVVKTRRYK-------AH-DEENQ 50
Query: 103 VKEGDHVIIGQCRPLSKTVRFNVLKVIPA 131
+EGD V I + RPLSKT R+NV++++ +
Sbjct: 51 CQEGDRVRIQETRPLSKTKRWNVIEILTS 79
>gi|327399514|ref|YP_004340383.1| 30S ribosomal protein S17 [Hippea maritima DSM 10411]
gi|327182143|gb|AEA34324.1| 30S ribosomal protein S17 [Hippea maritima DSM 10411]
Length = 87
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 56 ILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCR 115
I G S KM++TI+V L K+ +Y KR H ++GD V +CR
Sbjct: 5 IKEGVVVSDKMDKTIVVEVETLIEHPKFHKYIKRRKKFKVHDEKN-EARKGDRVKFIECR 63
Query: 116 PLSKTVRFNVLKV 128
P+SK F +L++
Sbjct: 64 PISKDKHFRLLEI 76
>gi|323495513|ref|ZP_08100587.1| 30S ribosomal protein S17 [Vibrio sinaloensis DSM 21326]
gi|323319394|gb|EGA72331.1| 30S ribosomal protein S17 [Vibrio sinaloensis DSM 21326]
Length = 84
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 55 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R G S KM+++I+V R H + Y +Y KR + + AH GD V I
Sbjct: 6 RTQQGRVVSDKMDKSIVVAIERMVKHPI--YGKYVKRTTKVHAH-DENNECGLGDSVEIA 62
Query: 113 QCRPLSKTVRFNVLKVI 129
+CRP+SKT + ++KV+
Sbjct: 63 ECRPMSKTKSWTLVKVL 79
>gi|194477049|ref|YP_002049228.1| 30S ribosomal protein S17 [Paulinella chromatophora]
gi|171192056|gb|ACB43018.1| 30S ribosomal protein S17 [Paulinella chromatophora]
Length = 83
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 11/90 (12%)
Query: 50 VSIRGRILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHI--SPCFRVKE 105
++++ RI GT S KM +T++V + H + YQ+ R + AH + C +
Sbjct: 1 MALKERI--GTVVSDKMEKTVVVAVENRFPHPI--YQKTVSRTARYKAHDEDNTC---RM 53
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSG 135
GD V I + RPLS+T R++V++VI S G
Sbjct: 54 GDRVRITETRPLSRTKRWSVIEVITKLSEG 83
>gi|218779753|ref|YP_002431071.1| 30S ribosomal protein S17 [Desulfatibacillum alkenivorans AK-01]
gi|218761137|gb|ACL03603.1| ribosomal protein S17 [Desulfatibacillum alkenivorans AK-01]
Length = 76
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 57 LAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 114
+ GT S +M++T++V R H + Y++Y KR + AH GD V I +
Sbjct: 1 MVGTVVSDRMDKTVVVLIERTVKHPL--YKKYIKRRARYSAH-DESNSCGMGDLVQIAES 57
Query: 115 RPLSKTVRFNVLKVI 129
RPLSKT R+ V +++
Sbjct: 58 RPLSKTKRWRVTQIL 72
>gi|289209320|ref|YP_003461386.1| 30S ribosomal protein S17 [Thioalkalivibrio sp. K90mix]
gi|288944951|gb|ADC72650.1| 30S ribosomal protein S17 [Thioalkalivibrio sp. K90mix]
Length = 88
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 46 FTGTVSIRGRILAGTCHSAKMN--RTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRV 103
T VS R + G S KM+ RT++V R H + Y ++ +R + + H
Sbjct: 1 MTEQVSKTQRSVVGRVISDKMDKTRTVLVERRVRHPL--YGKFIRRSTKLHVHDEENV-S 57
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVI 129
+ GD V I +CRP+SK RF +++V+
Sbjct: 58 RMGDRVRIRECRPMSKQKRFALIEVV 83
>gi|26987204|ref|NP_742629.1| 30S ribosomal protein S17 [Pseudomonas putida KT2440]
gi|148545748|ref|YP_001265850.1| 30S ribosomal protein S17 [Pseudomonas putida F1]
gi|386010122|ref|YP_005928399.1| protein RpsQ [Pseudomonas putida BIRD-1]
gi|394896023|ref|YP_004699924.2| 30S ribosomal protein S17 [Pseudomonas putida S16]
gi|397696208|ref|YP_006534091.1| 30S ribosomal protein S17 [Pseudomonas putida DOT-T1E]
gi|421524885|ref|ZP_15971506.1| 30S ribosomal protein S17 [Pseudomonas putida LS46]
gi|421528307|ref|ZP_15974874.1| 30S ribosomal protein S17 [Pseudomonas putida S11]
gi|431800516|ref|YP_007227419.1| 30S ribosomal protein S17 [Pseudomonas putida HB3267]
gi|81442296|sp|Q88QM6.1|RS17_PSEPK RecName: Full=30S ribosomal protein S17
gi|166219725|sp|A5VXQ6.1|RS17_PSEP1 RecName: Full=30S ribosomal protein S17
gi|24981842|gb|AAN66093.1|AE016238_11 ribosomal protein S17 [Pseudomonas putida KT2440]
gi|148509806|gb|ABQ76666.1| SSU ribosomal protein S17P [Pseudomonas putida F1]
gi|310940994|dbj|BAJ24371.1| 30S ribosomal protein S17 [Pseudomonas putida]
gi|310941024|dbj|BAJ24386.1| 30S ribosomal protein S17 [Pseudomonas putida]
gi|310941054|dbj|BAJ24401.1| 30S ribosomal protein S17 [Pseudomonas putida]
gi|310941975|dbj|BAJ24341.1| 30S ribosomal protein S17 [Pseudomonas putida]
gi|310942005|dbj|BAJ24356.1| 30S ribosomal protein S17 [Pseudomonas putida]
gi|313496828|gb|ADR58194.1| RpsQ [Pseudomonas putida BIRD-1]
gi|397332938|gb|AFO49297.1| 30S ribosomal protein S17 [Pseudomonas putida DOT-T1E]
gi|402214264|gb|EJT85594.1| 30S ribosomal protein S17 [Pseudomonas putida S11]
gi|402751348|gb|EJX11861.1| 30S ribosomal protein S17 [Pseudomonas putida LS46]
gi|430791281|gb|AGA71476.1| 30S ribosomal protein S17 [Pseudomonas putida HB3267]
Length = 88
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G S KM++TI ++ R H + Y +Y KR + + AH + K GD V I
Sbjct: 9 RTLTGRVVSDKMDKTITVLIERRVKHPI--YGKYVKRSTKLHAH-DEANQCKIGDKVSIR 65
Query: 113 QCRPLSKTVRFNVLKVI 129
+ RPL+KT + +++V+
Sbjct: 66 ETRPLAKTKSWALVEVL 82
>gi|437932|emb|CAA79786.1| ribosomal protein S17 [Thermotoga maritima]
Length = 107
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 57 LAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRP 116
L G S KM++T++V L Y++Y KR AH K GD V I + RP
Sbjct: 6 LTGIVVSDKMDKTVVVAVEKLVQHPLYKKYVKRTKKYHAH-DERNECKIGDVVEIEETRP 64
Query: 117 LSKTVRFNVLKVI 129
LSK R+ V+++I
Sbjct: 65 LSKAKRWRVVRII 77
>gi|218885196|ref|YP_002434517.1| 30S ribosomal protein S17 [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|347730665|ref|ZP_08863779.1| ribosomal S17 family protein [Desulfovibrio sp. A2]
gi|226697967|sp|B8DNA5.1|RS17_DESVM RecName: Full=30S ribosomal protein S17
gi|218756150|gb|ACL07049.1| ribosomal protein S17 [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|347520584|gb|EGY27715.1| ribosomal S17 family protein [Desulfovibrio sp. A2]
Length = 88
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 53 RGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
+GR+L G S K ++TI+VR L ++Y +R + AH P GD V I
Sbjct: 9 KGRVLTGIVVSDKNDKTIVVRVETLVQHPLLKKYVRRRNKFTAH-DPQNECGIGDKVKII 67
Query: 113 QCRPLSKTVRFNVLKVI 129
+ RPLS+ R++++ ++
Sbjct: 68 EYRPLSRNKRWHLVSIL 84
>gi|323136095|ref|ZP_08071178.1| 30S ribosomal protein S17 [Methylocystis sp. ATCC 49242]
gi|322399186|gb|EFY01705.1| 30S ribosomal protein S17 [Methylocystis sp. ATCC 49242]
Length = 80
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 55 RILAGTCHSAKMNRTIIVR--RNYLHFVKKYQRYEKRHSNIPAHISP-CFRVKEGDHVII 111
RIL G S K N+T++V+ R + H + +Q+ +R N AH F+V GD V I
Sbjct: 4 RILQGVVVSDKQNKTVVVKVERRFTHPL--FQKTVRRTKNYHAHDENGVFKV--GDSVTI 59
Query: 112 GQCRPLSKTVRFNVLKVIPAG 132
+ P+SK R+ V++ P
Sbjct: 60 EETAPISKLKRWRVVEDAPKA 80
>gi|300728434|ref|ZP_07061796.1| ribosomal protein S17 [Prevotella bryantii B14]
gi|299774353|gb|EFI70983.1| ribosomal protein S17 [Prevotella bryantii B14]
Length = 88
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 15/85 (17%)
Query: 55 RILAGTCHSAKMNRTIIVRRNY--LH-----FVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
++ G S KM++TI++ + +H FV+K ++Y N A++ GD
Sbjct: 11 KVRQGVVISNKMDKTIVIAAKFKEMHPIYGKFVQKTKKYHVHDENNEANV--------GD 62
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAG 132
V+I + RPLSKT R+ +++++
Sbjct: 63 TVMIMETRPLSKTKRWRLVQIVEKA 87
>gi|389843566|ref|YP_006345646.1| 30S ribosomal protein S17 [Mesotoga prima MesG1.Ag.4.2]
gi|387858312|gb|AFK06403.1| 30S ribosomal protein S17 [Mesotoga prima MesG1.Ag.4.2]
Length = 101
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 9/69 (13%)
Query: 55 RILAGTCHSAKMNRTIIVR--RNYLH--FVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
+ L GT S KM++TI+V R ++H + K + +K H++ P ++ GD V
Sbjct: 4 KTLVGTVVSDKMDKTIVVSVTRTHIHPFYGKTMKTTKKYHADDPEGLAGM-----GDTVE 58
Query: 111 IGQCRPLSK 119
I +C+PLSK
Sbjct: 59 IEECKPLSK 67
>gi|170729000|ref|YP_001763026.1| 30S ribosomal protein S17 [Shewanella woodyi ATCC 51908]
gi|226698023|sp|B1KMX4.1|RS17_SHEWM RecName: Full=30S ribosomal protein S17
gi|169814347|gb|ACA88931.1| ribosomal protein S17 [Shewanella woodyi ATCC 51908]
Length = 82
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 55 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G S KM+++I V R H + Y ++ KR + I AH + GD V I
Sbjct: 6 RTLQGRVLSNKMDKSITVAIERKVKHPL--YGKFLKRTTKIHAH-DEQNQCNAGDVVTIR 62
Query: 113 QCRPLSKTVRFNVLKVI 129
+CRPLSKT + +++V+
Sbjct: 63 ECRPLSKTKSWTLVEVV 79
>gi|395446846|ref|YP_006387099.1| 30S ribosomal protein S17 [Pseudomonas putida ND6]
gi|429331929|ref|ZP_19212669.1| 30S ribosomal protein S17 [Pseudomonas putida CSV86]
gi|338836239|gb|AEJ11044.1| 30S ribosomal protein S17 [Pseudomonas putida S16]
gi|388560843|gb|AFK69984.1| 30S ribosomal protein S17 [Pseudomonas putida ND6]
gi|428763440|gb|EKX85615.1| 30S ribosomal protein S17 [Pseudomonas putida CSV86]
Length = 90
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G S KM++TI ++ R H + Y +Y KR + + AH + K GD V I
Sbjct: 11 RTLTGRVVSDKMDKTITVLIERRVKHPI--YGKYVKRSTKLHAH-DEANQCKIGDKVSIR 67
Query: 113 QCRPLSKTVRFNVLKVI 129
+ RPL+KT + +++V+
Sbjct: 68 ETRPLAKTKSWALVEVL 84
>gi|157960023|ref|YP_001500057.1| 30S ribosomal protein S17 [Shewanella pealeana ATCC 700345]
gi|189029649|sp|A8GYY5.1|RS17_SHEPA RecName: Full=30S ribosomal protein S17
gi|157845023|gb|ABV85522.1| ribosomal protein S17 [Shewanella pealeana ATCC 700345]
Length = 82
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 55 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G S KM+++I V R H + Y ++ KR + I AH + GD V I
Sbjct: 6 RTLQGRVLSDKMDKSITVAIERKVKHPL--YGKFIKRTTKIHAH-DEQNQCNAGDIVTIR 62
Query: 113 QCRPLSKTVRFNVLKVI 129
+CRPLSKT + +++V+
Sbjct: 63 ECRPLSKTKSWTLVEVV 79
>gi|303328085|ref|ZP_07358524.1| 30S ribosomal protein S17 [Desulfovibrio sp. 3_1_syn3]
gi|345891289|ref|ZP_08842139.1| 30S ribosomal protein S17 [Desulfovibrio sp. 6_1_46AFAA]
gi|302861911|gb|EFL84846.1| 30S ribosomal protein S17 [Desulfovibrio sp. 3_1_syn3]
gi|345048431|gb|EGW52266.1| 30S ribosomal protein S17 [Desulfovibrio sp. 6_1_46AFAA]
Length = 87
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 53 RGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
+GR L G S K ++TI+VR L ++Y +R AH P GD V I
Sbjct: 8 KGRTLTGIVVSDKNDKTIVVRVETLVKHPLLKKYVRRRKKFTAH-DPMNECGMGDKVKIV 66
Query: 113 QCRPLSKTVRFNVLKVI 129
+ RP+S+ R++++ +I
Sbjct: 67 EFRPMSRNKRWHLVSII 83
>gi|433651280|ref|YP_007277659.1| 30S ribosomal protein S17 [Prevotella dentalis DSM 3688]
gi|433301813|gb|AGB27629.1| 30S ribosomal protein S17 [Prevotella dentalis DSM 3688]
Length = 85
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 15/85 (17%)
Query: 55 RILAGTCHSAKMNRTIIVRRNY--LH-----FVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
++ G S KM++TI++ + +H FV+K ++Y AH+ GD
Sbjct: 8 KVRQGVVVSDKMDKTIVIASKFKEMHPIYGKFVQKTKKYHAHDEKNEAHV--------GD 59
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAG 132
V I + RPLSKT R+ +++++
Sbjct: 60 TVQIMETRPLSKTKRWRLVQIVEKA 84
>gi|288942063|ref|YP_003444303.1| 30S ribosomal protein S17 [Allochromatium vinosum DSM 180]
gi|288897435|gb|ADC63271.1| 30S ribosomal protein S17 [Allochromatium vinosum DSM 180]
Length = 88
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 54 GRILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVII 111
R L G S+ M++TI ++ R H + Y ++ +R + I AH GD V +
Sbjct: 10 NRTLEGRVSSSAMDKTITVVIERRVKHPL--YGKFMRRSTKIHAH-DETNSCNVGDLVRV 66
Query: 112 GQCRPLSKTVRFNVLKVI 129
QCRPLSKT + +++++
Sbjct: 67 EQCRPLSKTKTWRLIEIL 84
>gi|104779764|ref|YP_606262.1| 30S ribosomal protein S17 [Pseudomonas entomophila L48]
gi|167031509|ref|YP_001666740.1| 30S ribosomal protein S17 [Pseudomonas putida GB-1]
gi|170723897|ref|YP_001751585.1| 30S ribosomal protein S17 [Pseudomonas putida W619]
gi|398843895|ref|ZP_10601012.1| 30S ribosomal protein S17 [Pseudomonas sp. GM84]
gi|123381065|sp|Q1IFV7.1|RS17_PSEE4 RecName: Full=30S ribosomal protein S17
gi|189029645|sp|B0KK76.1|RS17_PSEPG RecName: Full=30S ribosomal protein S17
gi|226698008|sp|B1JDX5.1|RS17_PSEPW RecName: Full=30S ribosomal protein S17
gi|95108751|emb|CAK13445.1| 30S ribosomal subunit protein S17 [Pseudomonas entomophila L48]
gi|166857997|gb|ABY96404.1| ribosomal protein S17 [Pseudomonas putida GB-1]
gi|169761900|gb|ACA75216.1| ribosomal protein S17 [Pseudomonas putida W619]
gi|398255127|gb|EJN40167.1| 30S ribosomal protein S17 [Pseudomonas sp. GM84]
Length = 88
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 55 RILAGTCHSAKMNRTI--IVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 112
R L G S KM++TI ++ R H + Y +Y KR + + AH + K GD V I
Sbjct: 9 RTLTGRVVSDKMDKTITVLIERRVKHPI--YGKYVKRSTKLHAH-DESNQCKIGDKVSIR 65
Query: 113 QCRPLSKTVRFNVLKVI 129
+ RPL+KT + +++V+
Sbjct: 66 ETRPLAKTKSWALVEVL 82
>gi|340346414|ref|ZP_08669539.1| 30S ribosomal protein S17 [Prevotella dentalis DSM 3688]
gi|339611871|gb|EGQ16688.1| 30S ribosomal protein S17 [Prevotella dentalis DSM 3688]
Length = 88
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 15/85 (17%)
Query: 55 RILAGTCHSAKMNRTIIVRRNY--LH-----FVKKYQRYEKRHSNIPAHISPCFRVKEGD 107
++ G S KM++TI++ + +H FV+K ++Y AH+ GD
Sbjct: 11 KVRQGVVVSDKMDKTIVIASKFKEMHPIYGKFVQKTKKYHAHDEKNEAHV--------GD 62
Query: 108 HVIIGQCRPLSKTVRFNVLKVIPAG 132
V I + RPLSKT R+ +++++
Sbjct: 63 TVQIMETRPLSKTKRWRLVQIVEKA 87
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.138 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,316,673,402
Number of Sequences: 23463169
Number of extensions: 88915197
Number of successful extensions: 142318
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 711
Number of HSP's that attempted gapping in prelim test: 140741
Number of HSP's gapped (non-prelim): 1558
length of query: 144
length of database: 8,064,228,071
effective HSP length: 108
effective length of query: 36
effective length of database: 9,825,173,115
effective search space: 353706232140
effective search space used: 353706232140
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 71 (32.0 bits)