BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032281
(144 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M5M1|RS11_EUPES 40S ribosomal protein S11 OS=Euphorbia esula GN=RPS11 PE=2 SV=1
Length = 159
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 139/159 (87%), Positives = 143/159 (89%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPREAI+GTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLASKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIDGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF+KKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGG KKAFTA+
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGVKKAFTAI 159
>sp|P17093|RS11_SOYBN 40S ribosomal protein S11 OS=Glycine max GN=RPS11 PE=2 SV=2
Length = 159
Score = 271 bits (693), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 139/159 (87%), Positives = 140/159 (88%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSTKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTG VSIRGRILAGTCHSAKMNRTIIVRRNYLHF+KKYQRYEKRHSNIPAHISP FRVKE
Sbjct: 61 FTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPAFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GDHVIIGQCRPLSKTVRFNVLKVIPAGSS GAKKAFT M
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
>sp|P42733|RS113_ARATH 40S ribosomal protein S11-3 OS=Arabidopsis thaliana GN=RPS11C PE=2
SV=2
Length = 159
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/159 (83%), Positives = 137/159 (86%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWK+IGLGFKTPREAI+G YID KCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKISGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYIDSKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRILAGTCHSAKM RTIIVRRNYLHFVKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61 FTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GDHVIIGQCRPLSKTVRFNVLKVIPAG+S KKAFT +
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGASAFGKKAFTGV 159
>sp|P16181|RS111_ARATH 40S ribosomal protein S11-1 OS=Arabidopsis thaliana GN=RPS11A PE=2
SV=1
Length = 160
Score = 258 bits (659), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 132/160 (82%), Positives = 138/160 (86%), Gaps = 16/160 (10%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWK+IGLGFKTPREAI+G Y+DKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYVDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRILAGTCHSAKM RTIIVRR+YLHFVKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61 FTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGG-AKKAFTAM 144
GDH+IIGQCRPLSKTVRFNVLKVIPAGSS KKAFT M
Sbjct: 121 GDHIIIGQCRPLSKTVRFNVLKVIPAGSSSSFGKKAFTGM 160
>sp|O65569|RS112_ARATH 40S ribosomal protein S11-2 OS=Arabidopsis thaliana GN=RPS11B PE=2
SV=2
Length = 159
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 131/159 (82%), Positives = 137/159 (86%), Gaps = 15/159 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWK+IGLGFKTPREAIEGTYID+KCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIEGTYIDQKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRIL+GTCHSAKM RTIIVRR+YLHFVKKY+RYEKRHSNIPAH+SPCFRVKE
Sbjct: 61 FTGTVSIRGRILSGTCHSAKMQRTIIVRRDYLHFVKKYRRYEKRHSNIPAHVSPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 144
GD V IGQCRPLSKTVRFNVLKVIPAGSS KKAFT M
Sbjct: 121 GDRVTIGQCRPLSKTVRFNVLKVIPAGSSSIGKKAFTGM 159
>sp|P25460|RS11_MAIZE 40S ribosomal protein S11 OS=Zea mays GN=RPS11 PE=2 SV=1
Length = 159
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 137/158 (86%), Positives = 140/158 (88%), Gaps = 15/158 (9%)
Query: 1 MAEQTEKAFLKQP---------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 45
MAEQTEKAFLKQP GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 46 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 105
FTGTVSIRGRI+AGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120
Query: 106 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTA 143
GDHVIIGQCRPLSKTVRFNV+KVIPAGS+ KKAFTA
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVVKVIPAGSAAAGKKAFTA 158
>sp|P42756|RS11_DUNTE 40S ribosomal protein S11 OS=Dunaliella tertiolecta GN=RPS11 PE=2
SV=1
Length = 157
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/159 (67%), Positives = 127/159 (79%), Gaps = 17/159 (10%)
Query: 1 MAEQTEKAFLKQ--------------PGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MAEQTEKAF KQ PGK G+RF+K++GL FKTP+EAI+G Y+DKKCPF
Sbjct: 1 MAEQTEKAFQKQVGVTGCFKSKEKKAPGKSGHRFFKNVGLNFKTPKEAIDGNYVDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
TG VSIRGRIL G S+KM RTIIVRR+YLHF+ KY RYEKRH+NIPAH+SPCFRV++G
Sbjct: 61 TGNVSIRGRILTGVVKSSKMMRTIIVRRDYLHFIPKYARYEKRHTNIPAHVSPCFRVRDG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIP-AGSSGGAKKAFTAM 144
D VIIGQCRPLSKT+RFNVL+VIP AG++G KK+F+
Sbjct: 121 DTVIIGQCRPLSKTIRFNVLRVIPQAGATG--KKSFSGF 157
>sp|Q54S90|RS11_DICDI 40S ribosomal protein S11 OS=Dictyostelium discoideum GN=rps11 PE=1
SV=1
Length = 155
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/155 (63%), Positives = 115/155 (74%), Gaps = 14/155 (9%)
Query: 1 MAE-QTEKAFLKQP-------------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 46
MA+ Q EKAF KQ GK G R++K+IGLG++TP++AIEGTYIDKKCPF
Sbjct: 1 MADIQAEKAFQKQQVSFKNRFQLKASKGKEGIRYYKNIGLGYRTPKDAIEGTYIDKKCPF 60
Query: 47 TGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEG 106
T VSIRG IL GT S KM RT++VRRNYLH++KKY R+EKRHSNIPAH+SP F VKEG
Sbjct: 61 TSDVSIRGAILRGTVISTKMRRTLVVRRNYLHYIKKYNRFEKRHSNIPAHVSPAFNVKEG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
D V IGQCRPLSKTVRFNV+K + +S KAF
Sbjct: 121 DSVTIGQCRPLSKTVRFNVIKHDISAASKKQFKAF 155
>sp|P41115|RS11_XENLA 40S ribosomal protein S11 OS=Xenopus laevis GN=rps11 PE=2 SV=1
Length = 158
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 116/158 (73%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+ G R+++S+GLGFKTPREAI+GTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLEGETGKEKLPRYYRSVGLGFKTPREAIDGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 QVGDTVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>sp|P0CX48|RS11B_YEAST 40S ribosomal protein S11-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS11B PE=1 SV=1
Length = 156
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 89/151 (58%), Positives = 112/151 (74%), Gaps = 12/151 (7%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q+E+AF KQP K R++K+ GLGFKTP+ AIEG+YIDKKCPFTG V
Sbjct: 5 LTVQSERAFQKQPHIFNNPKVKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLV 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRG+IL GT S KM+RTI++RR YLH++ KY RYEKRH N+P H+SP FRV+ GD V
Sbjct: 65 SIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFRVQVGDIVT 124
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+GQCRP+SKTVRFNV+KV + ++G A K F
Sbjct: 125 VGQCRPISKTVRFNVVKV--SAAAGKANKQF 153
>sp|P0CX47|RS11A_YEAST 40S ribosomal protein S11-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS11A PE=1 SV=1
Length = 156
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 89/151 (58%), Positives = 112/151 (74%), Gaps = 12/151 (7%)
Query: 1 MAEQTEKAFLKQP----------GKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 50
+ Q+E+AF KQP K R++K+ GLGFKTP+ AIEG+YIDKKCPFTG V
Sbjct: 5 LTVQSERAFQKQPHIFNNPKVKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLV 64
Query: 51 SIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVI 110
SIRG+IL GT S KM+RTI++RR YLH++ KY RYEKRH N+P H+SP FRV+ GD V
Sbjct: 65 SIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFRVQVGDIVT 124
Query: 111 IGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+GQCRP+SKTVRFNV+KV + ++G A K F
Sbjct: 125 VGQCRPISKTVRFNVVKV--SAAAGKANKQF 153
>sp|P62282|RS11_RAT 40S ribosomal protein S11 OS=Rattus norvegicus GN=Rps11 PE=1 SV=3
Length = 158
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 116/158 (73%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+ G R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>sp|P62281|RS11_MOUSE 40S ribosomal protein S11 OS=Mus musculus GN=Rps11 PE=2 SV=3
Length = 158
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 116/158 (73%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+ G R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>sp|P61270|RS11_MACFA 40S ribosomal protein S11 OS=Macaca fascicularis GN=RPS11 PE=2 SV=3
Length = 158
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 116/158 (73%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+ G R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>sp|P62280|RS11_HUMAN 40S ribosomal protein S11 OS=Homo sapiens GN=RPS11 PE=1 SV=3
Length = 158
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 116/158 (73%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+ G R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>sp|Q3T0V4|RS11_BOVIN 40S ribosomal protein S11 OS=Bos taurus GN=RPS11 PE=2 SV=3
Length = 158
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 116/158 (73%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+ G R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>sp|P79013|RS11_SCHPO 40S ribosomal protein S11 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps11a PE=2 SV=2
Length = 152
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/136 (65%), Positives = 105/136 (77%), Gaps = 7/136 (5%)
Query: 1 MAEQTEKAFLKQP------GKG-GNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIR 53
+ Q+E+AF KQP KG G R++K +GLGFKTP EAI G Y+DKKCPF G VSIR
Sbjct: 5 LVVQSERAFQKQPHIFQNAKKGAGRRWYKDVGLGFKTPAEAIYGEYVDKKCPFVGQVSIR 64
Query: 54 GRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQ 113
GRIL GT S KM+RTII+RR YLHF+ KY RYEKRH N+ AH+SP FR+ EGD V +GQ
Sbjct: 65 GRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFRINEGDVVTVGQ 124
Query: 114 CRPLSKTVRFNVLKVI 129
CRPLSKTVRFNVL+V+
Sbjct: 125 CRPLSKTVRFNVLRVV 140
>sp|Q9XSU4|RS11_CANFA 40S ribosomal protein S11 OS=Canis familiaris GN=RPS11 PE=1 SV=2
Length = 158
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 115/158 (72%), Gaps = 20/158 (12%)
Query: 1 MAE-QTEKAFLKQP-----------GKGGN----RFWKSIGLGFKTPREAIEGTYIDKKC 44
MA+ QTE+A+ KQP G+ G R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 45 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 103
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 104 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 HIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>sp|P52812|RS11_ANOGA 40S ribosomal protein S11 OS=Anopheles gambiae GN=RpS11 PE=2 SV=2
Length = 153
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/154 (59%), Positives = 110/154 (71%), Gaps = 15/154 (9%)
Query: 1 MAEQTE-KAFLKQPG----------KGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGT 49
MA+Q +AF KQ G K G R SIGLGFKTP+EAI GTYIDKKCPFTG
Sbjct: 1 MADQQNIRAFQKQLGINLNRKNVSRKKGLRMHHSIGLGFKTPKEAITGTYIDKKCPFTGH 60
Query: 50 VSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDH 108
+SIRGRIL G KM+RTI++RR+YLHF++KY R+EKRH N+ H+SPCFR V+ GD
Sbjct: 61 ISIRGRILTGVVRKMKMHRTIVIRRDYLHFIRKYDRFEKRHRNMSVHLSPCFRDVEAGDI 120
Query: 109 VIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 142
V +G+CRPLSKTVRFNVLKV G+KK F+
Sbjct: 121 VTVGECRPLSKTVRFNVLKV---SKMAGSKKKFS 151
>sp|Q6XHX5|RS11_DROYA 40S ribosomal protein S11 OS=Drosophila yakuba GN=RpS11 PE=2 SV=1
Length = 155
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/155 (60%), Positives = 108/155 (69%), Gaps = 17/155 (10%)
Query: 1 MAEQTEKAFLKQPGKGGNRFWK-------------SIGLGFKTPREAIEGTYIDKKCPFT 47
MA+Q E+AF KQ G NR K +GLGFKTPREAI+GTYIDKKCP+T
Sbjct: 1 MADQNERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
G V IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ G
Sbjct: 61 GDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
D V IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 121 DIVTIGECRPLSKTVRFNVLKV---SKGQGAKKSF 152
>sp|Q0E9B6|RS11_DROME 40S ribosomal protein S11 OS=Drosophila melanogaster GN=RpS11 PE=1
SV=1
Length = 155
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/155 (60%), Positives = 108/155 (69%), Gaps = 17/155 (10%)
Query: 1 MAEQTEKAFLKQPGKGGNRFWK-------------SIGLGFKTPREAIEGTYIDKKCPFT 47
MA+Q E+AF KQ G NR K +GLGFKTPREAI+GTYIDKKCP+T
Sbjct: 1 MADQNERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
G V IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ G
Sbjct: 61 GDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
D V IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 121 DIVTIGECRPLSKTVRFNVLKV---SKGQGAKKSF 152
>sp|Q292D0|RS11_DROPS 40S ribosomal protein S11 OS=Drosophila pseudoobscura pseudoobscura
GN=RpS11 PE=3 SV=2
Length = 155
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/155 (59%), Positives = 108/155 (69%), Gaps = 17/155 (10%)
Query: 1 MAEQTEKAFLKQPGKGGNR-------------FWKSIGLGFKTPREAIEGTYIDKKCPFT 47
MA+Q E+AF KQ G NR ++ +GLGFKTPREAI+GTYIDKKCP+T
Sbjct: 1 MADQNERAFQKQFGVNLNRKVKPGVTKKKILRRYRDVGLGFKTPREAIDGTYIDKKCPWT 60
Query: 48 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 106
G V IRGRIL G KM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ G
Sbjct: 61 GDVRIRGRILIGVVRKTKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPAFRDVEHG 120
Query: 107 DHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 141
D V IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 121 DIVTIGECRPLSKTVRFNVLKV---NKGQGAKKSF 152
>sp|Q8TW21|RS17_METKA 30S ribosomal protein S17P OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rps17p PE=3 SV=1
Length = 118
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 71/114 (62%), Gaps = 4/114 (3%)
Query: 16 GGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRN 75
G R K IGLG K PR + D CPF G + +RG IL G S +M++T+IV R
Sbjct: 3 GEYRMAKDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVERE 58
Query: 76 YLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
Y + +KY+R+E+R S IPAH PC +EGD V I +CRPLSKT F V++V+
Sbjct: 59 YYRYDRKYERWERRRSRIPAHNPPCIDAQEGDKVRIAECRPLSKTKSFVVIEVL 112
>sp|Q0W1X9|RS17_UNCMA 30S ribosomal protein S17P OS=Uncultured methanogenic archaeon RC-I
GN=rps17p PE=3 SV=1
Length = 111
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 69/109 (63%), Gaps = 4/109 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
K IGL K P+ D +CPF G++++RG+I GT SAKM+++++V R YL
Sbjct: 1 MAKDIGLNVKAPKTECN----DPQCPFHGSLAVRGQIFEGTVVSAKMSKSVVVSREYLKR 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
KY RYEKR S + AH PC KEGD V+I +CRPLSKT F V++V
Sbjct: 57 DLKYDRYEKRRSKLHAHNPPCINAKEGDKVVIAECRPLSKTKTFVVVEV 105
>sp|A2SPL1|RS17_METLZ 30S ribosomal protein S17P OS=Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z) GN=rps17p PE=3 SV=1
Length = 108
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 4/110 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
K+IGL P + + D CPF G++ +RG+++ G S +M T++V RN+LH
Sbjct: 1 MAKNIGLNVAVPEKDCD----DVNCPFHGSLPVRGQVITGKVVSERMQGTVVVERNFLHK 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
V+KY RYEKR S I AH++PC K GD V I +CRPL+KT + V++VI
Sbjct: 57 VQKYDRYEKRSSKIHAHMAPCLNAKIGDEVKIAECRPLNKTTSYVVVEVI 106
>sp|Q8TRT8|RS17_METAC 30S ribosomal protein S17P OS=Methanosarcina acetivorans (strain
ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=rps17p PE=3
SV=1
Length = 109
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 65/108 (60%), Gaps = 4/108 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
+ IGL P E + Y CPF GT+ +RG+IL GT S+KM+ T+++ R Y+
Sbjct: 1 MARDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKM 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
V KYQRYEKR S I AH C K GD V I +CRP+SKT + V+K
Sbjct: 57 VSKYQRYEKRRSKIHAHNPACISAKVGDIVTIAECRPISKTKSYVVVK 104
>sp|Q2FT32|RS17_METHJ 30S ribosomal protein S17P OS=Methanospirillum hungatei (strain
JF-1 / DSM 864) GN=rps17p PE=3 SV=1
Length = 108
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
+ IGL P E D CPF GT+ +RG+++ G S KM +++V+R+YLHF
Sbjct: 1 MARDIGLNVPVP----EKDCSDVNCPFHGTLPVRGQVITGKVVSDKMTGSVVVQRDYLHF 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
V+KYQRYEKR S I AH PC + GD V I +CRPLSKT + V++V
Sbjct: 57 VRKYQRYEKRSSKIHAHNPPCLHARVGDMVSIAECRPLSKTKTYVVVEV 105
>sp|Q8PV41|RS17_METMA 30S ribosomal protein S17P OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=rps17p PE=3 SV=2
Length = 109
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 65/108 (60%), Gaps = 4/108 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
+ IGL P E + Y CPF GT+ +RG+IL GT S+KM+ T+++ R Y+
Sbjct: 1 MARDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKM 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
V KYQRYEKR S I AH C K GD V I +CRP+SKT F V+K
Sbjct: 57 VSKYQRYEKRRSKIHAHNPACISAKVGDIVTIVECRPISKTKSFVVVK 104
>sp|Q46GA4|RS17_METBF 30S ribosomal protein S17P OS=Methanosarcina barkeri (strain Fusaro
/ DSM 804) GN=rps17p PE=3 SV=1
Length = 109
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 66/108 (61%), Gaps = 4/108 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
+ IGL P E +Y CPF GT+S+RG+IL GT S+KM+ T+++ R Y+
Sbjct: 1 MARDIGLNIPAPSEECNDSY----CPFHGTLSVRGQILVGTVVSSKMDNTVVIERQYMKL 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
V KYQRYEKR S + AH PC K GD V I +CR +SKT + V+K
Sbjct: 57 VPKYQRYEKRRSKVHAHNPPCISAKVGDIVTIAECRRISKTKSYVVVK 104
>sp|B8GKE2|RS17_METPE 30S ribosomal protein S17P OS=Methanosphaerula palustris (strain
ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rps17p PE=3 SV=1
Length = 108
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 72/109 (66%), Gaps = 4/109 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
++IGL + P E + D CPF G +S+RG+++ G S +M TI+V R+YLH+
Sbjct: 1 MARNIGLNVQPPVEECQ----DVNCPFHGNLSVRGQVITGKVVSDRMLGTIVVGRDYLHY 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
V+KY+RYEKR S + AH PC +VK GD V I +CRP+SK+ F V++V
Sbjct: 57 VRKYKRYEKRSSKLHAHNPPCLQVKVGDIVKIAECRPISKSTTFVVVEV 105
>sp|A3CT06|RS17_METMJ 30S ribosomal protein S17P OS=Methanoculleus marisnigri (strain
ATCC 35101 / DSM 1498 / JR1) GN=rps17p PE=3 SV=1
Length = 108
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 68/108 (62%), Gaps = 4/108 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
++IGL P E D CPF GT+ +RG+++ G S +MN T++V R +LH+VK
Sbjct: 3 RNIGLDVPIPETECE----DVNCPFHGTLPVRGQVITGKVVSDRMNGTVVVEREFLHYVK 58
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+RYEKR S AH +PC GD V I +CRPLSKT F V++V+
Sbjct: 59 KYKRYEKRRSRYHAHSTPCINAGVGDVVRIAECRPLSKTTNFVVVEVM 106
>sp|A7I5P8|RS17_METB6 30S ribosomal protein S17P OS=Methanoregula boonei (strain 6A8)
GN=rps17p PE=3 SV=1
Length = 108
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 71/109 (65%), Gaps = 4/109 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
++IGL + P++ + D CPF GT+ +RG+++ G S KM T++V R+YLH+
Sbjct: 1 MAQNIGLNVQPPKQECK----DVNCPFHGTLPVRGQVITGKVVSDKMMGTVVVARDYLHY 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
V+KY RYEKR S + AH PC + K GD V I +CRPLSK+ + V++V
Sbjct: 57 VRKYNRYEKRISKLHAHNPPCIQAKVGDLVKIAECRPLSKSTTYVVVEV 105
>sp|O24786|RS17_HALSA 30S ribosomal protein S17P OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=rps17p PE=3 SV=1
Length = 109
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
+IGL P EGT D+ CPF G +S+RG++L G S M +T++V R Y FV K
Sbjct: 2 AIGLNVTEP----EGTCSDEDCPFHGNLSVRGQVLEGEVASTDMEKTVVVEREYDVFVPK 57
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS 134
Y RY KR S +PAH CF + GD V I + RPLSKT V+++ G +
Sbjct: 58 YDRYMKRRSRVPAHAPECFDISVGDTVSIAETRPLSKTKSHVVVEITDGGDA 109
>sp|B0R665|RS17_HALS3 30S ribosomal protein S17P OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=rps17p PE=3 SV=1
Length = 109
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
+IGL P EGT D+ CPF G +S+RG++L G S M +T++V R Y FV K
Sbjct: 2 AIGLNVTEP----EGTCSDEDCPFHGNLSVRGQVLEGEVASTDMEKTVVVEREYDVFVPK 57
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS 134
Y RY KR S +PAH CF + GD V I + RPLSKT V+++ G +
Sbjct: 58 YDRYMKRRSRVPAHAPECFDISVGDTVSIAETRPLSKTKSHVVVEITDGGDA 109
>sp|Q12ZU2|RS17_METBU 30S ribosomal protein S17P OS=Methanococcoides burtonii (strain DSM
6242) GN=rps17p PE=3 SV=1
Length = 109
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 20 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 79
K IGL P + + D CPF G + +RG+I GT SAKM+RT+++++
Sbjct: 1 MAKDIGLDIPEPTKECD----DINCPFHGELPVRGQIHVGTVVSAKMDRTVVIQQRREKL 56
Query: 80 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
+ KYQRYEKR S I AH PC K GD V I +CRPLSKT + V+K
Sbjct: 57 INKYQRYEKRQSKIHAHNPPCIDAKVGDIVTIAECRPLSKTKSYVVVK 104
>sp|P12741|RS17_HALMA 30S ribosomal protein S17P OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rps17p PE=1
SV=3
Length = 112
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 63/115 (54%), Gaps = 4/115 (3%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
++GL + P E T D+ CPF G +S+RG+ L G S M +T++V R Y V K
Sbjct: 2 ALGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPK 57
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGA 137
Y R+ KR S +PAH C + GD V I +CRPLSKT V+ V+ G A
Sbjct: 58 YDRFMKRRSRVPAHAPDCLDLAVGDTVTIAECRPLSKTKSHVVVGVVADEQDGDA 112
>sp|Q18GF8|RS17_HALWD 30S ribosomal protein S17P OS=Haloquadratum walsbyi (strain DSM
16790) GN=rps17p PE=3 SV=1
Length = 110
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 67/116 (57%), Gaps = 7/116 (6%)
Query: 23 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 82
+IGL P E + D CPF G++S+RG+ L GT S M++T+IV R Y V K
Sbjct: 2 AIGLNVTEP----EVSCADTNCPFHGSLSVRGQTLEGTVASTDMDKTVIVEREYDVRVPK 57
Query: 83 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAK 138
Y R KR S IPAH PC + EGD V I + RPLSKT V++ I +GGA+
Sbjct: 58 YDRLMKRRSRIPAHAPPCVDLAEGDTVRIAETRPLSKTKSHVVVEQI---DTGGAE 110
>sp|O26120|RS17_METTH 30S ribosomal protein S17P OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rps17p PE=3 SV=1
Length = 106
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 58/88 (65%)
Query: 41 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 100
D CPF G + +RG+IL GT S K RT+ V R++ F++KY+RYEKR S I AH C
Sbjct: 15 DPNCPFHGDLPLRGQILEGTVVSDKAERTVTVERSFYKFIRKYERYEKRKSKIKAHKPDC 74
Query: 101 FRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
V+ GD V I +CRPLSKT F V++V
Sbjct: 75 IDVRVGDTVKIAECRPLSKTKNFVVVEV 102
>sp|Q9UX98|RS17_SULSO 30S ribosomal protein S17P OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rps17p PE=3 SV=1
Length = 114
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%)
Query: 41 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 100
D+ CP+ G++ +RG L G + + ++ R YL++ KY+RYE+R S I AH+ PC
Sbjct: 25 DEDCPYHGSLRVRGITLEGVIVKYRGTKAAVIERQYLYYDSKYKRYERRRSRIHAHVPPC 84
Query: 101 FRVKEGDHVIIGQCRPLSKTVRFNVL 126
V+EGD VIIG+CRPLSK++ F VL
Sbjct: 85 INVREGDKVIIGECRPLSKSISFVVL 110
>sp|O59426|RS17_PYRHO 30S ribosomal protein S17P OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rps17p PE=3 SV=1
Length = 116
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IGL + P E + D KCP+ G + I GR+ G S K +T+ V R Y H++K
Sbjct: 6 RDIGLRIQPPAEKCD----DPKCPWHGHLKIHGRVFEGIVISDKPRKTVTVERQYYHYLK 61
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+RYE R S I AH PC K GD V+I + RPLSKT F V+ V+
Sbjct: 62 KYERYELRRSRIHAHNPPCINAKVGDRVLIAETRPLSKTKHFVVVAVL 109
>sp|Q9V1U5|RS17_PYRAB 30S ribosomal protein S17P OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rps17p PE=3 SV=2
Length = 113
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IGL + P E + D KCP+ G + I GR+ G S K +T+ V R Y H++K
Sbjct: 3 RDIGLRIQPPAEKCD----DPKCPWHGHLKIHGRVFEGIVVSDKPRKTVTVERQYYHYLK 58
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+RYE R S I AH PC K GD V+I + RPLSKT F V+ V+
Sbjct: 59 KYERYELRRSRIHAHNPPCINAKVGDRVLIAETRPLSKTKHFVVVAVL 106
>sp|Q2NFW6|RS17_METST 30S ribosomal protein S17P OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rps17p PE=3 SV=1
Length = 106
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 24 IGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKY 83
+G+ K P + D CPF G +S+RG+++ GT S K +RTI V R++ ++ K+
Sbjct: 2 VGINVKQPEKECH----DPNCPFHGELSVRGQVIEGTVTSDKADRTITVERSFYKYINKF 57
Query: 84 QRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
+RYEKR+S I AH C VK GD V I +CR LSKT F +++V
Sbjct: 58 ERYEKRNSKIKAHKPDCLDVKVGDSVKIAECRQLSKTKHFVLVEV 102
>sp|Q4JB49|RS17_SULAC 30S ribosomal protein S17P OS=Sulfolobus acidocaldarius (strain
ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB
11770) GN=rps17p PE=3 SV=1
Length = 114
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 14 GKGGNRFWKSIGL-GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIV 72
GK G + K++G+ G P + + Y CP+ G++ +RG +L G A+ NRT V
Sbjct: 2 GKKG-QLVKNVGIEGVSAPSKTCDDEY----CPYHGSLKVRGIVLEGKLIRARANRTGTV 56
Query: 73 RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
R Y+ + KY+RYE+R S I HI C VKEGD+VIIG+ RP++K++ F +L V
Sbjct: 57 EREYIFYDSKYKRYERRRSRIHVHIPSCLEVKEGDNVIIGESRPIAKSISFVILGV 112
>sp|Q975I9|RS17_SULTO 30S ribosomal protein S17P OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=rps17p PE=3 SV=2
Length = 113
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 66/108 (61%), Gaps = 5/108 (4%)
Query: 20 FWKSIGL-GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 78
K+IG+ G P + + D CPF G + +RG IL G + +T +V R+YL
Sbjct: 7 LVKNIGIEGVNPPSKTCD----DINCPFHGNLRVRGIILEGRLIRYRAEKTGVVERDYLF 62
Query: 79 FVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVL 126
+ KY+RYE+R S I HI PC VKEGD+VII +CRP++K+V F V+
Sbjct: 63 YDTKYKRYERRRSRIHVHIPPCLDVKEGDNVIIAECRPIAKSVSFVVI 110
>sp|Q9YF81|RS17_AERPE 30S ribosomal protein S17P OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rps17p
PE=3 SV=2
Length = 114
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 60/96 (62%)
Query: 33 EAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSN 92
E E D CP+ GT+ +RG +L G A+ R ++V+ YL++ KKY RYE+R
Sbjct: 16 EPPEKVCSDPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLYYDKKYNRYERRSKK 75
Query: 93 IPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 128
I AH+ C VKEGD V+IG+ P+SKTV+F VL V
Sbjct: 76 IHAHLPDCISVKEGDVVVIGETMPISKTVKFTVLGV 111
>sp|P14042|RS17_METVA 30S ribosomal protein S17P OS=Methanococcus vannielii GN=rps17p
PE=3 SV=1
Length = 109
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 63/107 (58%), Gaps = 4/107 (3%)
Query: 21 WKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
+IG+ K P E D CPF GT+S+RG+I G K + TI+++R ++
Sbjct: 1 MSNIGIDVKAPENVCE----DVNCPFHGTLSVRGQIFEGVVSGDKGHNTIVIKREVTGYI 56
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
KY+RYEKR +++ AH PC K GD V + +CRP+SKT F V++
Sbjct: 57 SKYERYEKRTTSLVAHNPPCINAKTGDVVKVMECRPVSKTKSFVVIE 103
>sp|Q6LXE4|RS17_METMP 30S ribosomal protein S17P OS=Methanococcus maripaludis (strain S2
/ LL) GN=rps17p PE=3 SV=1
Length = 109
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
Query: 21 WKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
+IG+ K P E D CPF GT+S+RG+I G S K + TI+++R ++
Sbjct: 1 MSNIGIDVKAPENVCE----DPNCPFHGTLSVRGQIFEGIVTSDKGHDTIVIKREVTGYI 56
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
KY+RYEKR +++ AH C + K GD V + +CRP+SKT F V++
Sbjct: 57 SKYERYEKRTTSLVAHNPACIKAKVGDTVKVMECRPISKTKSFVVIE 103
>sp|Q8U008|RS17_PYRFU 30S ribosomal protein S17P OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rps17p PE=1 SV=1
Length = 113
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IGL + P E + D KCP+ G + I GR+ G S K +T+ V R Y ++
Sbjct: 3 RDIGLRVQPPAEKCD----DPKCPWHGNLKIHGRVFEGIVVSDKPRKTVTVERQYYFYLN 58
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+RYE R S I AH PC K GD V+I + RPLSKT F V+ V+
Sbjct: 59 KYERYELRRSKIHAHNPPCINAKVGDKVLIAETRPLSKTKHFVVVAVL 106
>sp|Q6L1B8|RS17_PICTO 30S ribosomal protein S17P OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=rps17p
PE=3 SV=1
Length = 106
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 21 WKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 80
++IG+ K P E T D KCPF G + I G+I+ GT S KMN +I+++R +
Sbjct: 1 MENIGIDVKKP----ERTCNDPKCPFHGNLRIHGQIIVGTVVSTKMNGSIVLKRESRRLI 56
Query: 81 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 127
KKY+RYE + S AH+ C V+ GD V I +CR L+KT+ F V++
Sbjct: 57 KKYERYETKISKFHAHLPGCIDVRPGDRVKIAECRKLAKTISFVVVE 103
>sp|Q5JDH9|RS17_PYRKO 30S ribosomal protein S17P OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rps17p PE=3 SV=1
Length = 114
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 62/108 (57%), Gaps = 4/108 (3%)
Query: 22 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 81
+ IGL + P E D KCP+ G + I GR + G S K +T++V R Y H++K
Sbjct: 2 REIGLRVQPPAEVCN----DPKCPWHGNLKIHGRYVEGIVVSDKGKKTVVVERQYYHYLK 57
Query: 82 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 129
KY+RYE R S + AH C K GD V+I + RP+SKT + V+ V+
Sbjct: 58 KYERYELRKSKVHAHNPECINAKVGDKVLIAETRPISKTKSWVVVAVL 105
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,459,194
Number of Sequences: 539616
Number of extensions: 2160071
Number of successful extensions: 4901
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 514
Number of HSP's that attempted gapping in prelim test: 4607
Number of HSP's gapped (non-prelim): 689
length of query: 144
length of database: 191,569,459
effective HSP length: 106
effective length of query: 38
effective length of database: 134,370,163
effective search space: 5106066194
effective search space used: 5106066194
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)