Query 032282
Match_columns 144
No_of_seqs 112 out of 1088
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 19:36:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032282.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032282hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gme_A Heat shock protein 16.9 100.0 1.1E-29 3.8E-34 181.2 11.0 110 26-142 42-151 (151)
2 3gla_A Low molecular weight he 100.0 7.2E-28 2.5E-32 160.5 14.2 96 25-127 2-97 (100)
3 4eld_A MJ16.5-P1, small heat s 100.0 6.2E-28 2.1E-32 173.7 12.4 105 28-141 57-161 (161)
4 4fei_A Heat shock protein-rela 99.9 3.4E-26 1.2E-30 153.2 10.9 91 25-127 4-94 (102)
5 3aab_A Putative uncharacterize 99.9 3E-26 1E-30 158.1 9.0 92 26-127 23-115 (123)
6 3l1e_A Alpha-crystallin A chai 99.9 5.1E-24 1.7E-28 143.5 12.1 100 27-141 2-105 (106)
7 2wj5_A Heat shock protein beta 99.9 1.1E-23 3.7E-28 140.8 11.3 96 28-138 2-98 (101)
8 2klr_A Alpha-crystallin B chai 99.9 6.2E-23 2.1E-27 149.4 10.4 99 29-143 65-164 (175)
9 3q9p_A Heat shock protein beta 99.9 1.4E-22 4.8E-27 131.4 10.7 82 32-127 2-84 (85)
10 2y1y_A Alpha-crystallin B chai 99.9 1.4E-21 4.9E-26 127.9 10.1 85 34-133 3-88 (90)
11 2bol_A TSP36, small heat shock 99.8 5.6E-21 1.9E-25 150.2 11.5 87 26-127 97-188 (314)
12 2bol_A TSP36, small heat shock 99.8 3.5E-20 1.2E-24 145.6 8.3 89 28-127 221-313 (314)
13 1rl1_A Suppressor of G2 allele 99.1 4.7E-10 1.6E-14 75.5 9.4 80 26-127 8-87 (114)
14 2xcm_C SGT1-like protein, cyto 99.1 4.9E-10 1.7E-14 72.5 9.0 79 27-127 2-80 (92)
15 2k8q_A Protein SHQ1; beta-sand 98.5 4.6E-07 1.6E-11 62.6 8.0 74 27-127 3-81 (134)
16 3eud_A Protein SHQ1; CS domain 98.4 4.2E-06 1.4E-10 56.1 11.1 76 25-127 15-95 (115)
17 3igf_A ALL4481 protein; two-do 98.4 9.3E-07 3.2E-11 70.8 8.0 71 28-127 298-369 (374)
18 1x5m_A Calcyclin-binding prote 98.1 7.3E-05 2.5E-09 50.9 11.9 80 26-127 19-102 (127)
19 1wh0_A Ubiquitin carboxyl-term 98.0 4.2E-05 1.4E-09 52.8 9.5 90 26-127 18-110 (134)
20 1wgv_A KIAA1068 protein; CS do 98.0 0.00021 7.2E-09 48.4 12.0 80 26-127 18-100 (124)
21 2o30_A Nuclear movement protei 97.7 0.00038 1.3E-08 47.6 9.3 76 26-127 3-79 (131)
22 1ejf_A Progesterone receptor P 97.7 0.00035 1.2E-08 47.4 9.0 76 29-127 5-80 (125)
23 3qor_A Nuclear migration prote 97.5 0.00063 2.1E-08 45.9 8.6 77 26-127 15-95 (121)
24 1wfi_A Nuclear distribution ge 97.5 0.00037 1.3E-08 47.6 7.0 77 26-127 6-86 (131)
25 2rh0_A NUDC domain-containing 97.4 0.0022 7.5E-08 45.2 10.3 76 26-127 12-89 (157)
26 2kmw_A Uncharacterized protein 97.3 0.00061 2.1E-08 47.8 6.9 76 27-127 4-80 (150)
27 2cg9_X CO-chaperone protein SB 97.3 0.00013 4.5E-09 50.2 3.0 84 26-127 5-96 (134)
28 3q9p_A Heat shock protein beta 86.9 2.1 7.1E-05 26.3 5.8 34 93-127 6-39 (85)
29 2y1y_A Alpha-crystallin B chai 81.8 3.1 0.00011 25.7 5.0 34 93-127 5-38 (90)
30 3gla_A Low molecular weight he 79.3 4.1 0.00014 25.5 5.0 34 93-127 13-46 (100)
31 3l1e_A Alpha-crystallin A chai 79.0 3.9 0.00014 26.2 4.9 34 93-127 11-44 (106)
32 2wj5_A Heat shock protein beta 77.8 5.8 0.0002 25.1 5.4 34 93-127 10-43 (101)
33 4eld_A MJ16.5-P1, small heat s 77.5 13 0.00043 25.5 7.5 32 95-127 67-98 (161)
34 4fei_A Heat shock protein-rela 74.1 6.8 0.00023 24.7 5.0 33 94-127 16-48 (102)
35 3aab_A Putative uncharacterize 73.3 7.6 0.00026 25.3 5.2 33 94-127 34-67 (123)
36 2nwt_A UPF0165 protein AF_2212 68.0 15 0.00051 22.0 5.1 14 109-122 3-16 (69)
37 1gme_A Heat shock protein 16.9 63.9 22 0.00075 24.1 6.1 32 95-127 54-86 (151)
38 2klr_A Alpha-crystallin B chai 60.9 15 0.0005 25.8 4.9 33 94-127 73-105 (175)
39 2cql_A OK/SW-CL.103, 60S ribos 51.3 44 0.0015 21.2 5.5 20 50-70 20-39 (100)
40 2o30_A Nuclear movement protei 48.2 33 0.0011 22.5 4.8 32 93-124 13-44 (131)
41 1rl6_A Protein (ribosomal prot 46.9 56 0.0019 22.9 6.0 45 50-126 11-55 (177)
42 1nkw_E 50S ribosomal protein L 46.6 65 0.0022 23.4 6.4 46 50-127 39-84 (212)
43 3v2d_H 50S ribosomal protein L 39.1 91 0.0031 21.9 6.1 44 50-125 12-55 (180)
44 2rh0_A NUDC domain-containing 38.3 58 0.002 22.2 4.9 33 92-124 21-53 (157)
45 1wgv_A KIAA1068 protein; CS do 37.4 56 0.0019 21.1 4.5 33 93-125 28-61 (124)
46 3qor_A Nuclear migration prote 36.0 70 0.0024 20.6 4.8 34 92-125 24-59 (121)
47 2uwa_A Cellulase; glycoside hy 35.7 62 0.0021 24.1 5.1 44 49-105 31-74 (274)
48 3j21_F 50S ribosomal protein L 35.7 67 0.0023 22.7 5.0 45 50-125 14-58 (184)
49 1vq8_E 50S ribosomal protein L 35.5 1.1E+02 0.0037 21.5 6.0 46 50-126 9-54 (178)
50 1ew4_A CYAY protein; friedreic 35.1 26 0.0009 22.5 2.5 19 109-127 28-46 (106)
51 1wfi_A Nuclear distribution ge 31.3 97 0.0033 20.1 5.0 34 92-125 15-50 (131)
52 2zkr_e 60S ribosomal protein L 31.2 1.1E+02 0.0036 21.8 5.4 25 45-70 8-32 (192)
53 3oeq_A Frataxin homolog, mitoc 28.9 47 0.0016 22.0 3.0 17 111-127 49-65 (123)
54 3u5e_H L8, RP24, YL11, 60S rib 27.6 1.6E+02 0.0056 20.8 6.8 20 50-70 13-32 (191)
55 3qqz_A Putative uncharacterize 27.4 1.8E+02 0.0062 21.2 7.9 69 39-122 13-85 (255)
56 1n91_A ORF, hypothetical prote 26.8 1.3E+02 0.0044 19.3 5.0 38 32-71 8-46 (108)
57 3iz5_F 60S ribosomal protein L 25.7 1.8E+02 0.0061 20.5 6.4 20 50-70 13-32 (190)
58 1ulv_A Glucodextranase; GH fam 24.9 88 0.003 28.0 4.8 93 26-127 807-914 (1020)
59 3iln_A Laminarinase; jelly ROW 23.9 88 0.003 22.7 4.0 52 50-105 46-97 (251)
60 3t3l_A Frataxin, mitochondrial 23.5 53 0.0018 21.8 2.5 17 109-125 40-56 (129)
61 4atf_A Beta-agarase B; hydrola 23.0 1.1E+02 0.0037 23.4 4.5 49 49-104 72-121 (308)
62 1q5l_A Chaperone protein DNAK; 22.8 1.6E+02 0.0054 19.3 4.8 30 110-142 99-131 (135)
63 2gjh_A Designed protein; oblig 22.4 82 0.0028 17.5 2.7 21 49-70 31-51 (62)
64 2hbp_A Cytoskeleton assembly c 21.2 44 0.0015 19.8 1.5 35 31-65 7-41 (68)
65 2ks0_A Uncharacterized protein 21.1 53 0.0018 19.6 1.9 23 47-70 17-39 (71)
66 1nvp_C Transcription initiatio 21.1 43 0.0015 20.3 1.5 15 108-122 46-60 (76)
67 3bbo_I Ribosomal protein L6; l 20.4 66 0.0022 23.5 2.6 46 50-127 54-100 (223)
68 2kgs_A Uncharacterized protein 20.2 66 0.0023 21.1 2.5 25 45-70 2-26 (132)
No 1
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.96 E-value=1.1e-29 Score=181.19 Aligned_cols=110 Identities=47% Similarity=0.842 Sum_probs=99.6
Q ss_pred CCceeeEEEcCCeEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCCC
Q 032282 26 STALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPEN 105 (144)
Q Consensus 26 ~~~~~~i~e~~~~~~i~~~LpG~~~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~~ 105 (144)
+.|+++|++++++|+|.++|||+++++|+|++.+|+.|+|+|++. .+.+ .++..|+++|| .+|.|.|+|.||.+
T Consensus 42 ~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~--~~~~-~~~~~~~~~Er---~~g~F~R~~~LP~~ 115 (151)
T 1gme_A 42 ANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERT--KEKE-DKNDKWHRVER---SSGKFVRRFRLLED 115 (151)
T ss_dssp GGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCC--CCCC-CTTCEEEECCC---CCCCEEEEEECSSC
T ss_pred cCCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEc--cccc-cCCceEEEEeE---eccEEEEEEECCCC
Confidence 789999999999999999999999999999996457999999998 5544 56788999999 99999999999999
Q ss_pred CCcCCeEEEEeCCEEEEEEecCCCCCCCCcEEEeeee
Q 032282 106 VKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINITS 142 (144)
Q Consensus 106 vd~~~i~A~~~~GiL~I~~pk~~~~~~~~~~~I~I~~ 142 (144)
||.+.|+|.|+||+|+|++||. ....+..++|+|++
T Consensus 116 vd~~~i~A~~~nGvL~I~lPK~-~~~~~~~~~I~I~~ 151 (151)
T 1gme_A 116 AKVEEVKAGLENGVLTVTVPKA-EVKKPEVKAIQISG 151 (151)
T ss_dssp CCGGGCEEEEETTEEEEEEECC-CCCTTCCCCCCCCC
T ss_pred ccccceEEEEECCEEEEEEEcc-CcCCCCCeEeeeCC
Confidence 9999999999999999999998 65566678898864
No 2
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.96 E-value=7.2e-28 Score=160.54 Aligned_cols=96 Identities=32% Similarity=0.492 Sum_probs=90.5
Q ss_pred CCCceeeEEEcCCeEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCC
Q 032282 25 GSTALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPE 104 (144)
Q Consensus 25 ~~~~~~~i~e~~~~~~i~~~LpG~~~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~ 104 (144)
.|.|++||++++++|+|.++|||+++++|+|++.+ +.|+|+|++. .+.. .....|+++|+ .+|+|+|+|.||.
T Consensus 2 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~--~~~~-~~~~~~~~~er---~~g~f~r~~~LP~ 74 (100)
T 3gla_A 2 QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDK-GILSIRGERK--SESS-TETERFSRIER---RYGSFHRRFALPD 74 (100)
T ss_dssp CSCCCEEEEECSSEEEEEEECTTSCGGGCEEEEET-TEEEEEEEEC--CGGG-SSGGGEEEECC---CCEEEEEEEECCT
T ss_pred CccCcEEEEECCCEEEEEEECCCCCHHHEEEEEEC-CEEEEEEEEc--CcCc-cCCccEEEEee---cceEEEEEEECCC
Confidence 47899999999999999999999999999999996 7999999999 5555 66789999999 9999999999999
Q ss_pred CCCcCCeEEEEeCCEEEEEEecC
Q 032282 105 NVKLDQIKAHVDNGVLTVIVPKD 127 (144)
Q Consensus 105 ~vd~~~i~A~~~~GiL~I~~pk~ 127 (144)
++|.+.|+|.|+||+|+|++||.
T Consensus 75 ~vd~~~i~A~~~~GvL~I~~pK~ 97 (100)
T 3gla_A 75 SADADGITAAGRNGVLEIRIPKR 97 (100)
T ss_dssp TBCTTSCEEEEETTEEEEEEEBC
T ss_pred CcChHHeEEEEeCCEEEEEEecC
Confidence 99999999999999999999998
No 3
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.95 E-value=6.2e-28 Score=173.70 Aligned_cols=105 Identities=26% Similarity=0.331 Sum_probs=90.7
Q ss_pred ceeeEEEcCCeEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCCCCC
Q 032282 28 ALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVK 107 (144)
Q Consensus 28 ~~~~i~e~~~~~~i~~~LpG~~~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~~vd 107 (144)
+++||++++++|+|.++|||+++++|+|++.+ +.|+|+|++. .... .++..|+++|| -.+|.|+|+|.||.+||
T Consensus 57 ~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~-~~L~I~g~~~--~~~~-~~~~~~~~~Er--~~~g~f~R~~~LP~~vd 130 (161)
T 4eld_A 57 MPISIIEGDQHIKVIAWLPGVNKEDIILNAVG-DTLEIRAKRS--PLMI-TESERIIYSEI--PEEEEIYRTIKLPATVK 130 (161)
T ss_dssp CCEEEEECSSEEEEEEECTTCCGGGEEEEEET-TEEEEEEECC--CCCC-CSSCEEEEECS--CCCCEEEEEEECSSCBC
T ss_pred cceeEEEeCCEEEEEEECCCCChHhEEEEEEC-CEEEEEEEEc--cccc-CCCceEEEEEe--eccccEEEEEECCCCcc
Confidence 44999999999999999999999999999996 7999999998 4433 45667888776 02789999999999999
Q ss_pred cCCeEEEEeCCEEEEEEecCCCCCCCCcEEEeee
Q 032282 108 LDQIKAHVDNGVLTVIVPKDANHKKSSVRNINIT 141 (144)
Q Consensus 108 ~~~i~A~~~~GiL~I~~pk~~~~~~~~~~~I~I~ 141 (144)
.++|+|.|+||+|+|++||. +... .++|+|+
T Consensus 131 ~~~i~A~~~nGvL~I~lpK~-~~~~--~r~I~Ie 161 (161)
T 4eld_A 131 EENASAKFENGVLSVILPKA-ESSI--KKGINIE 161 (161)
T ss_dssp GGGCEEEEETTEEEEEEEBC-GGGS--CCCCCCC
T ss_pred cccEEEEEECCEEEEEEEcC-CCCC--CcEeecC
Confidence 99999999999999999998 5544 4788875
No 4
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.94 E-value=3.4e-26 Score=153.18 Aligned_cols=91 Identities=29% Similarity=0.382 Sum_probs=85.1
Q ss_pred CCCceeeEEEcCCeEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCC
Q 032282 25 GSTALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPE 104 (144)
Q Consensus 25 ~~~~~~~i~e~~~~~~i~~~LpG~~~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~ 104 (144)
.+.|++||++++++|+|.++|||+++++|+|++++ +.|+|+|+++ . ...|+++|| .+|.|.|+|.||.
T Consensus 4 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~-------~-~~~~~~~er---~~g~f~R~~~LP~ 71 (102)
T 4fei_A 4 PWTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDG-GQLTVSGERP-------G-TEHLLRSER---PSGRFVRELAFPE 71 (102)
T ss_dssp ECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEET-TEEEEEEEEC-------C-CSSCSSCCS---EEEEEEEEEECSS
T ss_pred cccCcEEEEEcCCEEEEEEECCCCchHhEEEEEEC-CEEEEEEEEe-------c-CCCEEEEEE---eccEEEEEEECCC
Confidence 47899999999999999999999999999999996 7999999987 2 356788898 9999999999999
Q ss_pred CCCcCCeEEEEeCCEEEEEEecC
Q 032282 105 NVKLDQIKAHVDNGVLTVIVPKD 127 (144)
Q Consensus 105 ~vd~~~i~A~~~~GiL~I~~pk~ 127 (144)
++|.+.|+|.|+||+|+|++||.
T Consensus 72 ~vd~~~i~A~~~~GvL~I~lpK~ 94 (102)
T 4fei_A 72 PVRPASGVASLAGGVLTVRFEKL 94 (102)
T ss_dssp CBCTTCCEEEEETTEEEEEEEBS
T ss_pred CcchhHcEEEEECCEEEEEEEcc
Confidence 99999999999999999999998
No 5
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.93 E-value=3e-26 Score=158.15 Aligned_cols=92 Identities=27% Similarity=0.356 Sum_probs=84.9
Q ss_pred CCceeeEEEcCCeEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCCC
Q 032282 26 STALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPEN 105 (144)
Q Consensus 26 ~~~~~~i~e~~~~~~i~~~LpG~~~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~~ 105 (144)
+.|+++|++++++|+|.++|||+++++|+|++.+++.|+|+|++. .+ . +..|+++|| .+ +|.|+|.||.+
T Consensus 23 ~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~--~~---~-~~~~~~~Er---~~-~f~R~~~LP~~ 92 (123)
T 3aab_A 23 VYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAERE--IT---E-PGVKYLTQR---PK-YVRKVIRLPYN 92 (123)
T ss_dssp HCSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECC--CC---C-CSCEEEECS---CS-EEEEEEECSSE
T ss_pred CCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEe--cc---C-CCeEEEEEE---eE-EEEEEEECCCC
Confidence 568999999999999999999999999999999526999999988 22 2 578999999 99 99999999999
Q ss_pred CCcCCe-EEEEeCCEEEEEEecC
Q 032282 106 VKLDQI-KAHVDNGVLTVIVPKD 127 (144)
Q Consensus 106 vd~~~i-~A~~~~GiL~I~~pk~ 127 (144)
+|.++| +|.|+||+|+|++||.
T Consensus 93 vd~~~i~~A~~~~GvL~I~lPK~ 115 (123)
T 3aab_A 93 VAKDAEISGKYENGVLTIRIPIA 115 (123)
T ss_dssp ECTTCCCEEEEETTEEEEEEEGG
T ss_pred cCcchhCeeEEcCCEEEEEEEcC
Confidence 999999 9999999999999998
No 6
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.91 E-value=5.1e-24 Score=143.54 Aligned_cols=100 Identities=21% Similarity=0.399 Sum_probs=84.0
Q ss_pred CceeeEEEcCCeEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCCCC
Q 032282 27 TALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENV 106 (144)
Q Consensus 27 ~~~~~i~e~~~~~~i~~~LpG~~~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~~v 106 (144)
+...+|++++++|.|.++||||++++|+|++.+ +.|+|+|++. ... ....|++ +.|.|+|.||.+|
T Consensus 2 sg~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~--~~~---~~~~~~~--------~eF~R~~~LP~~v 67 (106)
T 3l1e_A 2 SGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQE-DFVEIHGKHN--ERQ---DDHGYIS--------REFHRRYRLPSNV 67 (106)
T ss_dssp CCSEEEEECSSEEEEEEECTTSCGGGEEEEEET-TEEEEEEEEE--EEE---TTTEEEE--------EEEEEEEECCTTB
T ss_pred CCceEEEEcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEc--ccc---CCCCEEE--------EEEEEEEECCCCc
Confidence 346899999999999999999999999999996 7999999987 322 2334532 3599999999999
Q ss_pred CcCCeEEEE-eCCEEEEEEecCCCCC---CCCcEEEeee
Q 032282 107 KLDQIKAHV-DNGVLTVIVPKDANHK---KSSVRNINIT 141 (144)
Q Consensus 107 d~~~i~A~~-~~GiL~I~~pk~~~~~---~~~~~~I~I~ 141 (144)
|.++|+|.| +||+|+|++||. +.. .+..|+|+|+
T Consensus 68 d~~~i~A~~s~~GvL~I~~PK~-~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 68 DQSALSCSLSADGMLTFSGPKI-PSGVDAGHSERAIPVS 105 (106)
T ss_dssp CTTSCEEEECTTSEEEEEEEBC-CCCTTTTSSSCCCCCC
T ss_pred ChhHcEEEECCCCEEEEEEEcc-CcccccCCCCeEeeec
Confidence 999999999 899999999998 443 2467899986
No 7
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.91 E-value=1.1e-23 Score=140.76 Aligned_cols=96 Identities=19% Similarity=0.287 Sum_probs=80.0
Q ss_pred ceeeEEEcCCeEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCCCCC
Q 032282 28 ALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVK 107 (144)
Q Consensus 28 ~~~~i~e~~~~~~i~~~LpG~~~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~~vd 107 (144)
..+||++++++|.|.++|||+++++|+|++.+ +.|+|+|++. ... .+..|+++ .|+|+|.||.++|
T Consensus 2 ~~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~--~~~---~~~~~~~~--------eF~R~~~LP~~vd 67 (101)
T 2wj5_A 2 AMAQVPTDPGYFSVLLDVKHFSPEEISVKVVG-DHVEVHARHE--ERP---DEHGFIAR--------EFHRRYRLPPGVD 67 (101)
T ss_dssp CCCCCCCCSSCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEE--ECS---STTCCEEE--------EEEEEEECCTTBC
T ss_pred CcEEEEEeCCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEe--ccc---CCCCEEEE--------EEEEEEECCCCcC
Confidence 36799999999999999999999999999996 6999999998 322 23445433 4999999999999
Q ss_pred cCCeEEEE-eCCEEEEEEecCCCCCCCCcEEE
Q 032282 108 LDQIKAHV-DNGVLTVIVPKDANHKKSSVRNI 138 (144)
Q Consensus 108 ~~~i~A~~-~~GiL~I~~pk~~~~~~~~~~~I 138 (144)
.+.|+|.| +||+|+|++||. ....|....|
T Consensus 68 ~~~i~A~~s~nGvL~I~lPK~-~~~~~~~~~i 98 (101)
T 2wj5_A 68 PAAVTSALSPEGVLSIQATPA-SAQASLPSPP 98 (101)
T ss_dssp TTCCEEEECTTSEEEEEECBC-CCCCSSCC--
T ss_pred hhHCEEEECCCCEEEEEEECC-CcCCCCCCcc
Confidence 99999999 899999999998 6666644444
No 8
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.89 E-value=6.2e-23 Score=149.41 Aligned_cols=99 Identities=24% Similarity=0.404 Sum_probs=71.6
Q ss_pred eeeEEEcCCeEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCCCCCc
Q 032282 29 LMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKL 108 (144)
Q Consensus 29 ~~~i~e~~~~~~i~~~LpG~~~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~~vd~ 108 (144)
.++|++++++|+|.++||||++++|+|++.+ +.|+|+|++. ... ++..|+++ .|+|+|.||.+||.
T Consensus 65 ~~dv~e~~d~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~--~~~---~~~~~~~r--------eF~R~~~LP~~Vd~ 130 (175)
T 2klr_A 65 LSEMRLEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHE--ERQ---DEHGFISR--------EFHRKYRIPADVDP 130 (175)
T ss_dssp ----CCCCSEEEEEECCSSCCGGGEEEEEET-TEEEEEEEEE--EEE---ETTEEEEE--------EEEEEEECTTTCCT
T ss_pred ceEEEEcCCeEEEEEECCCCChHHEEEEEEC-CEEEEEEEEc--ccc---cCCceEEE--------EEEEEEECCCCcCh
Confidence 4799999999999999999999999999996 6999999987 322 23445433 49999999999999
Q ss_pred CCeEEEE-eCCEEEEEEecCCCCCCCCcEEEeeeec
Q 032282 109 DQIKAHV-DNGVLTVIVPKDANHKKSSVRNINITSK 143 (144)
Q Consensus 109 ~~i~A~~-~~GiL~I~~pk~~~~~~~~~~~I~I~~~ 143 (144)
++|+|.| +||+|+|++||. +... ..++|+|+..
T Consensus 131 ~~i~A~~s~dGvL~I~lPK~-~~~~-~~r~I~I~~~ 164 (175)
T 2klr_A 131 LTITSSLSSDGVLTVNGPRK-QVSG-PERTIPITRE 164 (175)
T ss_dssp TTCEEEECTTSCEEEEEECC----------------
T ss_pred hHeEEEEcCCCEEEEEEECC-CCCC-CCeEEEEecC
Confidence 9999999 799999999998 4332 3588888753
No 9
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.89 E-value=1.4e-22 Score=131.39 Aligned_cols=82 Identities=22% Similarity=0.369 Sum_probs=69.3
Q ss_pred EEEcCCeEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCCCCCcCCe
Q 032282 32 WLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQI 111 (144)
Q Consensus 32 i~e~~~~~~i~~~LpG~~~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~~vd~~~i 111 (144)
+.|++++|.|.++||||++++|+|++.+ +.|+|+|++. .... + ..| .+++|.|+|.||.+||.+.|
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~--~~~~-~--~~~--------~~~~F~R~~~LP~~vd~~~i 67 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKD-GVVEITGKHA--ARQD-E--HGY--------ISRCFTRKYTLPPGVDPTQV 67 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEET-TEEEEEEEEC------------C--------CCEEEEEEEECCTTCCGGGC
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEc--cccC-C--CCE--------EEEEEEEEEECCCCcChHHc
Confidence 4578999999999999999999999996 6999999988 3222 1 122 56799999999999999999
Q ss_pred EEEEe-CCEEEEEEecC
Q 032282 112 KAHVD-NGVLTVIVPKD 127 (144)
Q Consensus 112 ~A~~~-~GiL~I~~pk~ 127 (144)
+|.|. ||+|+|++||.
T Consensus 68 ~A~~~~~GvL~I~lPK~ 84 (85)
T 3q9p_A 68 SSSLSPEGTLTVEAPMP 84 (85)
T ss_dssp EEEECTTSEEEEEEECC
T ss_pred EEEECCCCEEEEEEEcC
Confidence 99997 99999999996
No 10
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.86 E-value=1.4e-21 Score=127.85 Aligned_cols=85 Identities=22% Similarity=0.409 Sum_probs=67.8
Q ss_pred EcCCeEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCCCCCcCCeEE
Q 032282 34 ESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKA 113 (144)
Q Consensus 34 e~~~~~~i~~~LpG~~~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~~vd~~~i~A 113 (144)
+++++|+|.++|||+++++|+|++.+ +.|+|+|++. ... .+..|++ +.|+|+|.||.+||.+.|+|
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~--~~~---~~~~~~~--------~ef~R~~~LP~~vd~~~i~A 68 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHE--ERQ---DEHGFIS--------REFHRKYRIPADVDPLTITS 68 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEE--EEE---CSSSEEE--------EEEEEEEECCTTBCGGGCEE
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEe--ccc---CCCCEEE--------EEEEEEEECCCCcChhHcEE
Confidence 57889999999999999999999996 7999999987 322 2344543 35999999999999999999
Q ss_pred EE-eCCEEEEEEecCCCCCCC
Q 032282 114 HV-DNGVLTVIVPKDANHKKS 133 (144)
Q Consensus 114 ~~-~~GiL~I~~pk~~~~~~~ 133 (144)
.| +||+|+|++||. +.+.|
T Consensus 69 ~~~~~GvL~I~~pK~-~~~~p 88 (90)
T 2y1y_A 69 SMSSDGVLTVNGPRK-QVSGP 88 (90)
T ss_dssp EECTTSEEEEEECBC------
T ss_pred EECCCCEEEEEEEcC-CCCCC
Confidence 99 899999999998 55444
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.85 E-value=5.6e-21 Score=150.19 Aligned_cols=87 Identities=21% Similarity=0.301 Sum_probs=79.1
Q ss_pred CCceeeEEEcCC----eEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEE
Q 032282 26 STALMDWLESPS----AHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIE 101 (144)
Q Consensus 26 ~~~~~~i~e~~~----~~~i~~~LpG~~~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~ 101 (144)
+.|++||+|+++ +|.|.++||||++++|+|++.+ +.|+|+|++. .+.+ .. + .+|.|.|+|.
T Consensus 97 ~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~-~~L~I~ge~~--~~~e---~~------r---~~g~F~R~~~ 161 (314)
T 2bol_A 97 LDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADK-NKLVVRAQKS--VACG---DA------A---MSESVGRSIP 161 (314)
T ss_dssp TGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEET-TEEEEEECCB--SSTT---CC------C---BCCCEEEEEE
T ss_pred CCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEEC-CEEEEEEEEe--ccCC---CC------E---EEEEEEEEEE
Confidence 679999999999 9999999999999999999996 7999999988 3222 11 4 8899999999
Q ss_pred CCCCCCcCCeEEEEe-CCEEEEEEecC
Q 032282 102 LPENVKLDQIKAHVD-NGVLTVIVPKD 127 (144)
Q Consensus 102 lP~~vd~~~i~A~~~-~GiL~I~~pk~ 127 (144)
||.+||.+.|+|.|+ ||+|+|++||.
T Consensus 162 LP~~Vd~e~i~A~~~~nGVL~I~lPK~ 188 (314)
T 2bol_A 162 LPPSVDRNHIQATITTDDVLVIEAPVN 188 (314)
T ss_dssp CCTTBCGGGCEEEECSSSEEEEEEEBS
T ss_pred CCCCccccccEEEEeCCCEEEEEEecc
Confidence 999999999999998 99999999998
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.81 E-value=3.5e-20 Score=145.64 Aligned_cols=89 Identities=17% Similarity=0.298 Sum_probs=70.5
Q ss_pred ceeeEEEcC---CeEEEEEEc-CCCCCCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECC
Q 032282 28 ALMDWLESP---SAHIFKIDV-PGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELP 103 (144)
Q Consensus 28 ~~~~i~e~~---~~~~i~~~L-pG~~~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP 103 (144)
..++|.+++ ++|.|.++| ||+++++|+|++++ +.|+|+|+++ .+...|+++|+ .+|.|+|+|.||
T Consensus 221 ~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~-~~LtI~ge~~-------~~~~~~~~~Er---~~g~F~R~~~LP 289 (314)
T 2bol_A 221 EGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKG-NKVYVHGVTG-------KEEKTENASHS---EHREFYKAFVTP 289 (314)
T ss_dssp CEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESS-SEEEEEEEEC----------------------CEEEEEEEECS
T ss_pred CCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEEC-CEEEEEEEEe-------ccCCceEEEEE---eeeEEEEEEECC
Confidence 446676655 489999999 99999999999996 7999999998 22335788999 999999999999
Q ss_pred CCCCcCCeEEEEeCCEEEEEEecC
Q 032282 104 ENVKLDQIKAHVDNGVLTVIVPKD 127 (144)
Q Consensus 104 ~~vd~~~i~A~~~~GiL~I~~pk~ 127 (144)
++||.++|+|.|+||+|+|++||.
T Consensus 290 ~~vd~~~i~A~~~dGvL~i~~Pk~ 313 (314)
T 2bol_A 290 EVVDASKTQAEIVDGLMVVEAPLF 313 (314)
T ss_dssp SEECGGGCEEEEETTEEEEEEEEE
T ss_pred CCcChHHeEEEEeCCEEEEEEecC
Confidence 999999999999999999999985
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.12 E-value=4.7e-10 Score=75.53 Aligned_cols=80 Identities=15% Similarity=0.271 Sum_probs=71.4
Q ss_pred CCceeeEEEcCCeEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCCC
Q 032282 26 STALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPEN 105 (144)
Q Consensus 26 ~~~~~~i~e~~~~~~i~~~LpG~~~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~~ 105 (144)
..++++++++.+.+.|.+.|||++++++.|.+.+ +.|.|.+... ....|...+.|+..
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~-~~l~v~~~~~---------------------~~~~y~~~~~L~~~ 65 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSE-KELSALVKLP---------------------SGEDYNLKLELLHP 65 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSS-SCEEEEEECT---------------------TSSEEEEEECBSSC
T ss_pred CCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEc-CEEEEEEEeC---------------------CCcEEEEEeeCCCc
Confidence 4678999999999999999999999999999996 6899987654 12257889999999
Q ss_pred CCcCCeEEEEeCCEEEEEEecC
Q 032282 106 VKLDQIKAHVDNGVLTVIVPKD 127 (144)
Q Consensus 106 vd~~~i~A~~~~GiL~I~~pk~ 127 (144)
|+++..++.+.+|.|.|+|+|.
T Consensus 66 I~~e~s~~~~~~~~l~i~L~K~ 87 (114)
T 1rl1_A 66 IIPEQSTFKVLSTKIEIKLKKP 87 (114)
T ss_dssp CCGGGEEEEECSSSEEEEEECS
T ss_pred CCccccEEEEECCEEEEEEEcC
Confidence 9999999999999999999997
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.11 E-value=4.9e-10 Score=72.48 Aligned_cols=79 Identities=15% Similarity=0.281 Sum_probs=70.3
Q ss_pred CceeeEEEcCCeEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCCCC
Q 032282 27 TALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENV 106 (144)
Q Consensus 27 ~~~~~i~e~~~~~~i~~~LpG~~~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~~v 106 (144)
.++++++++.+.+.|.+.+||+.++++.|.+.+ +.|.|.+... ....|...+.|+..|
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~-~~l~v~~~~~---------------------~~~~y~~~~~L~~~I 59 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGE-QILSVVIEVP---------------------GEDAYYLQPRLFGKI 59 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECS-SBEEEEECCT---------------------TSCCEEECCBBSSCB
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEEC-CEEEEEEEcC---------------------CCcEEEEeeEcCCcc
Confidence 478999999999999999999999999999997 6899987543 122577888999999
Q ss_pred CcCCeEEEEeCCEEEEEEecC
Q 032282 107 KLDQIKAHVDNGVLTVIVPKD 127 (144)
Q Consensus 107 d~~~i~A~~~~GiL~I~~pk~ 127 (144)
+++..++.+.+|.|.|+|+|.
T Consensus 60 ~~~~s~~~~~~~~l~i~L~K~ 80 (92)
T 2xcm_C 60 IPDKCKYEVLSTKIEICLAKA 80 (92)
T ss_dssp CGGGCEEEECSSCEEEEEEBS
T ss_pred CchhEEEEEECCEEEEEEEcC
Confidence 999999999999999999998
No 15
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.51 E-value=4.6e-07 Score=62.60 Aligned_cols=74 Identities=14% Similarity=0.223 Sum_probs=65.6
Q ss_pred CceeeEEEcCCeEEEEEEcCCCC--CCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCC
Q 032282 27 TALMDWLESPSAHIFKIDVPGYS--RENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPE 104 (144)
Q Consensus 27 ~~~~~i~e~~~~~~i~~~LpG~~--~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~ 104 (144)
.|...+.++++..+|.+.+|..+ ..++++.+++ ..+.+ ....|.-++.||.
T Consensus 3 TP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~-~~F~F--------------------------~~~PYyLRL~LP~ 55 (134)
T 2k8q_A 3 TPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIF--------------------------HLSPYYLRLRFPH 55 (134)
T ss_dssp CSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECS-SSEEE--------------------------CSSSSCEEECCSS
T ss_pred CceEEEEECCCEEEEEEEcCccccCccccEEEEeC-CEEEE--------------------------ecCCeEEEecCCC
Confidence 68899999999999999999999 8999999995 78888 3444667899999
Q ss_pred CC-CcCCeEEEE--eCCEEEEEEecC
Q 032282 105 NV-KLDQIKAHV--DNGVLTVIVPKD 127 (144)
Q Consensus 105 ~v-d~~~i~A~~--~~GiL~I~~pk~ 127 (144)
.| +.+.-+|.| +.|.|+|++||.
T Consensus 56 ~V~e~~~~kA~YD~d~~~~~VtLpK~ 81 (134)
T 2k8q_A 56 ELIDDERSTAQYDSKDECINVKVAKL 81 (134)
T ss_dssp CEECCSSCEEEEETTTTEEEEEEEES
T ss_pred eeecCCCcceeEeccCCEEEEEEeCC
Confidence 97 888899999 589999999997
No 16
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.45 E-value=4.2e-06 Score=56.10 Aligned_cols=76 Identities=13% Similarity=0.176 Sum_probs=65.6
Q ss_pred CCCceeeEEEcCCeEEEEEEcCCCC--CCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEEC
Q 032282 25 GSTALMDWLESPSAHIFKIDVPGYS--RENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIEL 102 (144)
Q Consensus 25 ~~~~~~~i~e~~~~~~i~~~LpG~~--~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~l 102 (144)
..+|...|.++++..+|.+.+|.++ ..++++.++ |+.+... ...|.-++.|
T Consensus 15 ~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd-~~~F~F~--------------------------~~PYyLRL~l 67 (115)
T 3eud_A 15 MITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQ-ENMIIFH--------------------------LSPYYLRLRF 67 (115)
T ss_dssp CBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEE-TTEEEEE--------------------------ETTEEEEEEC
T ss_pred EeCCcEEEEECCCEEEEEEEcCceecccCccEEEEe-CCEEEEe--------------------------cCCeEEEEec
Confidence 3679999999999999999999987 789999999 4778773 3356778999
Q ss_pred CCCC-CcCCeEEEE--eCCEEEEEEecC
Q 032282 103 PENV-KLDQIKAHV--DNGVLTVIVPKD 127 (144)
Q Consensus 103 P~~v-d~~~i~A~~--~~GiL~I~~pk~ 127 (144)
|..+ +.++-+|+| ++|.++|++||.
T Consensus 68 P~~vved~~~~A~YD~d~g~~~v~lpK~ 95 (115)
T 3eud_A 68 PHELIDDERSTAQYDSKDECINVKVAKL 95 (115)
T ss_dssp SSCEECSTTCEEEEETTTTEEEEEEEES
T ss_pred CcceecCCCcceEEeCCCcEEEEEEcCC
Confidence 9996 778889999 689999999998
No 17
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.38 E-value=9.3e-07 Score=70.81 Aligned_cols=71 Identities=18% Similarity=0.287 Sum_probs=60.3
Q ss_pred ceeeEEEcCCeEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCCCCC
Q 032282 28 ALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVK 107 (144)
Q Consensus 28 ~~~~i~e~~~~~~i~~~LpG~~~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~~vd 107 (144)
.++.|... .|.+++.|||+++++|++... |..|+| ..|+|+|.+.||..+.
T Consensus 298 ~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~-gdeL~v--------------------------~~g~~rR~i~LP~~L~ 348 (374)
T 3igf_A 298 KPITIDTH--NRQVRLFLPGFDKKQVKLTQY-GPEVTV--------------------------EAGDQRRNIFLPPALS 348 (374)
T ss_dssp CSEEEETT--TTEEEEECTTCCGGGCEEEEE-TTEEEE--------------------------EETTEEEEEECCTTTT
T ss_pred CCEEEEec--cEEEEEECCCCCHHHeEEEEE-CCeEEE--------------------------EECCEeecccCCHHHc
Confidence 34454333 899999999999999999999 579999 5778999999999976
Q ss_pred cCC-eEEEEeCCEEEEEEecC
Q 032282 108 LDQ-IKAHVDNGVLTVIVPKD 127 (144)
Q Consensus 108 ~~~-i~A~~~~GiL~I~~pk~ 127 (144)
... ..|.|+||.|+|++...
T Consensus 349 ~~~v~~A~~~~~~L~i~~~~~ 369 (374)
T 3igf_A 349 GRPITGAKFQNNYLIISFLEH 369 (374)
T ss_dssp TCCEEEEEEETTEEEEEECCC
T ss_pred CCCccccEEECCEEEEEEehh
Confidence 665 78999999999998654
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.12 E-value=7.3e-05 Score=50.94 Aligned_cols=80 Identities=14% Similarity=0.272 Sum_probs=67.9
Q ss_pred CCceeeEEEcCCeEEEEEEcCCC---CCCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEE-
Q 032282 26 STALMDWLESPSAHIFKIDVPGY---SRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIE- 101 (144)
Q Consensus 26 ~~~~~~i~e~~~~~~i~~~LpG~---~~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~- 101 (144)
..++++++++.+...|.+.|||+ .++++.|.+.+ +.|.|.+... ....|.-.+.
T Consensus 19 ~~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~-~~l~v~~~~~---------------------~~~~y~~~~~~ 76 (127)
T 1x5m_A 19 KISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTE-RSFDLLVKNL---------------------NGKSYSMIVNN 76 (127)
T ss_dssp ECCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECS-SEEEEEECSC---------------------SSSCEEEEEEC
T ss_pred CccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEc-CEEEEEEEcC---------------------CCCcEEEEhHH
Confidence 45689999999999999999999 89999999996 7899976433 1124667775
Q ss_pred CCCCCCcCCeEEEEeCCEEEEEEecC
Q 032282 102 LPENVKLDQIKAHVDNGVLTVIVPKD 127 (144)
Q Consensus 102 lP~~vd~~~i~A~~~~GiL~I~~pk~ 127 (144)
|-..|+++.-+.....+.+.|+|-|.
T Consensus 77 L~~~I~~e~S~~~v~~~kVei~L~K~ 102 (127)
T 1x5m_A 77 LLKPISVEGSSKKVKTDTVLILCRKK 102 (127)
T ss_dssp BSSCCCTTTCEEEEETTEEEEEEECS
T ss_pred hcCccCcccCEEEEeCCEEEEEEEEC
Confidence 99999999989999999999999998
No 19
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.05 E-value=4.2e-05 Score=52.83 Aligned_cols=90 Identities=12% Similarity=0.145 Sum_probs=69.8
Q ss_pred CCceeeEEEc-CCeEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCccc--cccCCccEEEEeecCCCcceEEEEEEC
Q 032282 26 STALMDWLES-PSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEE--ANTKETVWHVAERRAGGRGDFSREIEL 102 (144)
Q Consensus 26 ~~~~~~i~e~-~~~~~i~~~LpG~~~e~i~v~i~~g~~L~I~g~~~~~~~~--~~~~~~~~~~~e~~~~~~~~f~r~~~l 102 (144)
..++++++++ .+...|.+.++++.++++.|.+.+ +.|.|..... ... ....+.. ....|.-.+.|
T Consensus 18 ~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~-~~l~v~~~~~--~~~~l~~~~a~g---------~~~~y~~~~~L 85 (134)
T 1wh0_A 18 AFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFRE-QDFTLIFQTR--DGNFLRLHPGCG---------PHTTFRWQVKL 85 (134)
T ss_dssp SCCCEEEEEETTTEEEEEEECCSBCTTSCEEEECS-SEEEEEECBC--CHHHHHHSTTCC---------TTSCEEEEEEB
T ss_pred cCCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEEC-CEEEEEEEcC--CCcccccccccC---------cceeEEEeccc
Confidence 4688999999 999999999999999999999997 7899986544 110 0000000 01157778889
Q ss_pred CCCCCcCCeEEEEeCCEEEEEEecC
Q 032282 103 PENVKLDQIKAHVDNGVLTVIVPKD 127 (144)
Q Consensus 103 P~~vd~~~i~A~~~~GiL~I~~pk~ 127 (144)
-..|+++.-+..+....+.|+|.|+
T Consensus 86 ~~~I~pe~S~~~v~~~kIeI~L~K~ 110 (134)
T 1wh0_A 86 RNLIEPEQCTFCFTASRIDICLRKR 110 (134)
T ss_dssp SSCEEEEEEEEEECSSEEEEEEEES
T ss_pred cccCCchhCEEEEeCCEEEEEEEEC
Confidence 9999999888888889999999997
No 20
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=97.98 E-value=0.00021 Score=48.40 Aligned_cols=80 Identities=13% Similarity=0.174 Sum_probs=65.7
Q ss_pred CCceeeEEEcCCeEEEEEEcC-CC-CCCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECC
Q 032282 26 STALMDWLESPSAHIFKIDVP-GY-SRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELP 103 (144)
Q Consensus 26 ~~~~~~i~e~~~~~~i~~~Lp-G~-~~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP 103 (144)
..|.+.+.++.+...|.+.|| |+ +.+++.|.+.+ +.|.|.++.. .+. .+.-...|.
T Consensus 18 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~-~~l~v~~~~~--------~~~-------------~~~~~~~L~ 75 (124)
T 1wgv_A 18 VRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSS-SSIRVAMLEE--------NGE-------------RVLMEGKLT 75 (124)
T ss_dssp CCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECS-SEEEEEEECS--------SSE-------------EEEEEEEBS
T ss_pred cCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEc-CEEEEEEEcc--------CCC-------------ceEEccccc
Confidence 567999999999999999999 88 89999999997 7999976532 000 123456799
Q ss_pred CCCCcCCeEEEEeCCE-EEEEEecC
Q 032282 104 ENVKLDQIKAHVDNGV-LTVIVPKD 127 (144)
Q Consensus 104 ~~vd~~~i~A~~~~Gi-L~I~~pk~ 127 (144)
..|+++.-...++++- |.|+|-|.
T Consensus 76 ~~I~~e~S~w~i~~~k~v~i~L~K~ 100 (124)
T 1wgv_A 76 HKINTESSLWSLEPGKCVLVNLSKV 100 (124)
T ss_dssp SCBCTTTCEEEECTTSEEEEEECBS
T ss_pred CcCCCcCCEEEEeCCCEEEEEEEEC
Confidence 9999999999998875 99999997
No 21
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.69 E-value=0.00038 Score=47.60 Aligned_cols=76 Identities=18% Similarity=0.222 Sum_probs=61.1
Q ss_pred CCceeeEEEcCCeEEEEEEcC-CCCCCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCC
Q 032282 26 STALMDWLESPSAHIFKIDVP-GYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPE 104 (144)
Q Consensus 26 ~~~~~~i~e~~~~~~i~~~Lp-G~~~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~ 104 (144)
..|.+.+.++.+...|.+.|| |++.+++.|.+.. +.|.|.++.. . .-...|..
T Consensus 3 ~~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~-~~l~v~~~g~------------------------~-~~~~~L~~ 56 (131)
T 2o30_A 3 SEAKYTWDQELNEINIQFPVTGDADSSAIKIRMVG-KKICVKNQGE------------------------I-VIDGELLH 56 (131)
T ss_dssp --CCCEEEEETTEEEEEEECC---CCSCEEEEEET-TEEEEEETTE------------------------E-EEEEEBSS
T ss_pred CCCcEEEEecCCEEEEEEECCCCCCccceEEEEEC-CEEEEEECCE------------------------e-eEcccccc
Confidence 357899999999999999996 8999999999997 7899964211 1 23567889
Q ss_pred CCCcCCeEEEEeCCEEEEEEecC
Q 032282 105 NVKLDQIKAHVDNGVLTVIVPKD 127 (144)
Q Consensus 105 ~vd~~~i~A~~~~GiL~I~~pk~ 127 (144)
.|+++.-...+.++-|.|+|-|.
T Consensus 57 ~I~~e~S~w~i~~~kv~i~L~K~ 79 (131)
T 2o30_A 57 EVDVSSLWWVINGDVVDVNVTKK 79 (131)
T ss_dssp CEEEEEEEEEEETTEEEEEEEES
T ss_pred ccccccCEEEEeCCEEEEEEEEC
Confidence 99999888899999999999987
No 22
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.68 E-value=0.00035 Score=47.41 Aligned_cols=76 Identities=14% Similarity=0.202 Sum_probs=64.3
Q ss_pred eeeEEEcCCeEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCCCCCc
Q 032282 29 LMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKL 108 (144)
Q Consensus 29 ~~~i~e~~~~~~i~~~LpG~~~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~~vd~ 108 (144)
.++++++.+...|.+.||+. +++.|.+.+ +.|.+++... .. ...|.-.+.|-..|++
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~-~~l~~~~~~~-------~~-------------~~~y~~~l~L~~~I~~ 61 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEK-SKLTFSCLGG-------SD-------------NFKHLNEIDLFHCIDP 61 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEET-TEEEEEEEET-------TT-------------TEEEEEEEEBSSCEEE
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEEC-CEEEEEEEeC-------CC-------------CceEEEEEEccceecc
Confidence 79999999999999999996 689999996 7999987653 11 1136678899999999
Q ss_pred CCeEEEEeCCEEEEEEecC
Q 032282 109 DQIKAHVDNGVLTVIVPKD 127 (144)
Q Consensus 109 ~~i~A~~~~GiL~I~~pk~ 127 (144)
+.-+....+..+.|+|.|+
T Consensus 62 e~S~~~v~~~kiei~L~K~ 80 (125)
T 1ejf_A 62 NDSKHKRTDRSILCCLRKG 80 (125)
T ss_dssp EEEEEEECSSCEEEEEEES
T ss_pred ccCEEEECCCEEEEEEEEC
Confidence 9988888888999999998
No 23
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.54 E-value=0.00063 Score=45.92 Aligned_cols=77 Identities=21% Similarity=0.233 Sum_probs=63.3
Q ss_pred CCceeeEEEcCCeEEEEEEcC-C--CCCCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEEC
Q 032282 26 STALMDWLESPSAHIFKIDVP-G--YSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIEL 102 (144)
Q Consensus 26 ~~~~~~i~e~~~~~~i~~~Lp-G--~~~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~l 102 (144)
..+.+.+.++.+...|.+.|| | ++.+++.|.+.. +.|.|..+.. .+.-...|
T Consensus 15 ~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~-~~l~v~~kg~------------------------~~~~~g~L 69 (121)
T 3qor_A 15 DLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQR-RHLRVGLKGQ------------------------PAIIDGEL 69 (121)
T ss_dssp BCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEET-TEEEEEETTS------------------------CCSEEEEB
T ss_pred cCCCEEEEEccceEEEEEECCCCCcccccceEEEEEc-CEEEEEEcCc------------------------ceEEeccc
Confidence 567899999999999999999 4 789999999997 6898853211 01124568
Q ss_pred CCCCCcCCeEEEEeCC-EEEEEEecC
Q 032282 103 PENVKLDQIKAHVDNG-VLTVIVPKD 127 (144)
Q Consensus 103 P~~vd~~~i~A~~~~G-iL~I~~pk~ 127 (144)
...|+++.-...+++| .|.|+|-|.
T Consensus 70 ~~~I~~deS~w~i~~~~~i~i~L~K~ 95 (121)
T 3qor_A 70 YNEVKVEESSWLIADGAVVTVHLEKI 95 (121)
T ss_dssp SSCBCGGGCEEEEETTTEEEEEEEBS
T ss_pred cccccccccEEEEcCCCEEEEEEEEC
Confidence 8999999999999998 999999987
No 24
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.49 E-value=0.00037 Score=47.59 Aligned_cols=77 Identities=21% Similarity=0.274 Sum_probs=63.2
Q ss_pred CCceeeEEEcCCeEEEEEEcC-C--CCCCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEEC
Q 032282 26 STALMDWLESPSAHIFKIDVP-G--YSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIEL 102 (144)
Q Consensus 26 ~~~~~~i~e~~~~~~i~~~Lp-G--~~~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~l 102 (144)
..|.+.+.++.+...|.+.|| | ++.+++.|.+.. +.|.|..+.. . . .-...|
T Consensus 6 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~-~~l~v~~kg~-----~---------------~----~~~~~L 60 (131)
T 1wfi_A 6 SGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQR-RHLRVGLKGQ-----P---------------P----VVDGEL 60 (131)
T ss_dssp SCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEET-TEEEEEETTS-----C---------------C----SBCSCB
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeC-CEEEEEECCc-----e---------------E----EEeccc
Confidence 567899999999999999999 6 899999999997 7999964311 0 0 113457
Q ss_pred CCCCCcCCeEEEEeCC-EEEEEEecC
Q 032282 103 PENVKLDQIKAHVDNG-VLTVIVPKD 127 (144)
Q Consensus 103 P~~vd~~~i~A~~~~G-iL~I~~pk~ 127 (144)
...|+++.-...+++| .|.|+|-|.
T Consensus 61 ~~~I~~e~s~w~i~~~k~v~i~L~K~ 86 (131)
T 1wfi_A 61 YNEVKVEESSWLIEDGKVVTVHLEKI 86 (131)
T ss_dssp SSCBCSTTCEEEEETTTEEEEEEEBS
T ss_pred ccccccccCEEEEcCCCEEEEEEEEC
Confidence 8889999999999988 899999998
No 25
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.39 E-value=0.0022 Score=45.20 Aligned_cols=76 Identities=13% Similarity=0.295 Sum_probs=63.6
Q ss_pred CCceeeEEEcCCeEEEEEEcC-CCCCCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCC
Q 032282 26 STALMDWLESPSAHIFKIDVP-GYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPE 104 (144)
Q Consensus 26 ~~~~~~i~e~~~~~~i~~~Lp-G~~~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~ 104 (144)
..+.+.+.++.+...|.+.|| |++.++|.|.+.. +.|.|..+.. .+ -...|..
T Consensus 12 ~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~-~~L~v~~kg~------------------------~~-l~g~L~~ 65 (157)
T 2rh0_A 12 GTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQS-RHVALAVGGR------------------------EI-LKGKLFD 65 (157)
T ss_dssp ECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECS-SEEEEEETTE------------------------EE-EEEEBSS
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccceEEEEec-CEEEEEECCE------------------------EE-Eeecccc
Confidence 467899999999999999998 8999999999997 7899964211 11 3567899
Q ss_pred CCCcCCeEEEEeCCE-EEEEEecC
Q 032282 105 NVKLDQIKAHVDNGV-LTVIVPKD 127 (144)
Q Consensus 105 ~vd~~~i~A~~~~Gi-L~I~~pk~ 127 (144)
.|+++.-...++++- |.|+|-|.
T Consensus 66 ~I~~eeS~w~i~~~k~v~I~L~K~ 89 (157)
T 2rh0_A 66 STIADEGTWTLEDRKMVRIVLTKT 89 (157)
T ss_dssp CBCGGGCEEEEECCCEEEEEEEBS
T ss_pred ccCccccEEEEcCCcEEEEEEEEc
Confidence 999999999998875 99999998
No 26
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=97.35 E-value=0.00061 Score=47.78 Aligned_cols=76 Identities=16% Similarity=0.298 Sum_probs=63.1
Q ss_pred CceeeEEEcCCeEEEEEEcCCCCCCCeEEEEe-cCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCCC
Q 032282 27 TALMDWLESPSAHIFKIDVPGYSRENIKVQIE-DGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPEN 105 (144)
Q Consensus 27 ~~~~~i~e~~~~~~i~~~LpG~~~e~i~v~i~-~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~~ 105 (144)
.|.+.++++.+.+.|.|.|+++ ++++|.+. + +.|.+++... .-..|.-.+.|-..
T Consensus 4 ~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~-~~l~~~~~~~---------------------~~~~y~~~l~L~~~ 59 (150)
T 2kmw_A 4 NPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQ-GLFSFSALGA---------------------QGERFEFSLELYGK 59 (150)
T ss_dssp CCCEEEEECSSEEEEEECCSSE--EEEEECCCTT-EEEEEEEETT---------------------TTEEEEEEEEBSSC
T ss_pred CCcEEEEeCCCEEEEEEEeCCC--CceEEEEecC-CEEEEEEEcC---------------------CCceEEEEeEhhhc
Confidence 5789999999999999999998 47888888 5 6899988722 11246778889999
Q ss_pred CCcCCeEEEEeCCEEEEEEecC
Q 032282 106 VKLDQIKAHVDNGVLTVIVPKD 127 (144)
Q Consensus 106 vd~~~i~A~~~~GiL~I~~pk~ 127 (144)
|+++ -+......-+.|+|.|+
T Consensus 60 Idpe-S~~~v~~~kIei~L~K~ 80 (150)
T 2kmw_A 60 IMTE-YRKNVGLRNIIFSIQKE 80 (150)
T ss_dssp EEEE-EEEEEESSSEEEEEEEC
T ss_pred cccc-ceEEecCCEEEEEEEEC
Confidence 9999 88888888899999997
No 27
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=97.31 E-value=0.00013 Score=50.20 Aligned_cols=84 Identities=11% Similarity=0.200 Sum_probs=58.9
Q ss_pred CCceeeEEEcCCe-------EEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEE
Q 032282 26 STALMDWLESPSA-------HIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSR 98 (144)
Q Consensus 26 ~~~~~~i~e~~~~-------~~i~~~LpG~~~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r 98 (144)
..|.+.+.++.+. +.|.+.+|+++ ++.|.+.+ +.|.+++... ...+.- ....|.-
T Consensus 5 ~~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~-~~l~~~~~~~-------~~~g~~--------~~~~y~~ 66 (134)
T 2cg9_X 5 INPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKP-SYIELKAQSK-------PHVGDE--------NVHHYQL 66 (134)
T ss_dssp ------CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCS-SEEEECCEEC----------------------CEEBCE
T ss_pred cCCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEEC-CEEEEEEecc-------cccCCc--------cCceEEE
Confidence 3577888888876 99999999984 88888886 6899976654 100000 0124667
Q ss_pred EEECCCCCCcCCeEEEEeCCE-EEEEEecC
Q 032282 99 EIELPENVKLDQIKAHVDNGV-LTVIVPKD 127 (144)
Q Consensus 99 ~~~lP~~vd~~~i~A~~~~Gi-L~I~~pk~ 127 (144)
.+.|...|+++.-+..+.++. |.|+|.|+
T Consensus 67 ~l~L~~~Idpe~S~~~v~~~~~vei~L~K~ 96 (134)
T 2cg9_X 67 HIDLYKEIIPEKTMHKVANGQHYFLKLYKK 96 (134)
T ss_dssp EEECSSCCCSSSEEEEECCC--CEEEEEEC
T ss_pred EEEChhhccccccEEEECCCEEEEEEEEEC
Confidence 789999999999999998888 99999998
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=86.87 E-value=2.1 Score=26.34 Aligned_cols=34 Identities=9% Similarity=0.287 Sum_probs=30.5
Q ss_pred cceEEEEEECCCCCCcCCeEEEEeCCEEEEEEecC
Q 032282 93 RGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKD 127 (144)
Q Consensus 93 ~~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~pk~ 127 (144)
-..|.-.+.|| .++++.|+..+++|.|+|+.-+.
T Consensus 6 ~~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 39 (85)
T 3q9p_A 6 ADRWRVSLDVN-HFAPDELTVKTKDGVVEITGKHA 39 (85)
T ss_dssp CCEEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC
T ss_pred CCEEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 44688899999 89999999999999999999776
No 29
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=81.80 E-value=3.1 Score=25.74 Aligned_cols=34 Identities=18% Similarity=0.336 Sum_probs=29.5
Q ss_pred cceEEEEEECCCCCCcCCeEEEEeCCEEEEEEecC
Q 032282 93 RGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKD 127 (144)
Q Consensus 93 ~~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~pk~ 127 (144)
-..|.-.+.|| .++.+.|+..+.++.|+|+.-+.
T Consensus 5 ~~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 38 (90)
T 2y1y_A 5 KDRFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHE 38 (90)
T ss_dssp -CCEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred CCEEEEEEECC-CCcHHHeEEEEECCEEEEEEEEe
Confidence 34688899999 89999999999999999999765
No 30
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=79.29 E-value=4.1 Score=25.48 Aligned_cols=34 Identities=24% Similarity=0.464 Sum_probs=29.8
Q ss_pred cceEEEEEECCCCCCcCCeEEEEeCCEEEEEEecC
Q 032282 93 RGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKD 127 (144)
Q Consensus 93 ~~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~pk~ 127 (144)
-..|.-.+.|| .++.+.|+..++++.|+|+.-+.
T Consensus 13 ~~~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~ 46 (100)
T 3gla_A 13 VNHFVLYADLP-GIDPSQIEVQMDKGILSIRGERK 46 (100)
T ss_dssp SSEEEEEEECT-TSCGGGCEEEEETTEEEEEEEEC
T ss_pred CCEEEEEEECC-CCCHHHEEEEEECCEEEEEEEEc
Confidence 34677889999 79999999999999999998776
No 31
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=78.97 E-value=3.9 Score=26.17 Aligned_cols=34 Identities=9% Similarity=0.246 Sum_probs=29.8
Q ss_pred cceEEEEEECCCCCCcCCeEEEEeCCEEEEEEecC
Q 032282 93 RGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKD 127 (144)
Q Consensus 93 ~~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~pk~ 127 (144)
-..|.-.+.|| .++.+.|+..+++|.|+|+.-+.
T Consensus 11 ~~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 44 (106)
T 3l1e_A 11 RDKFVIFLDVK-HFSPEDLTVKVQEDFVEIHGKHN 44 (106)
T ss_dssp SSEEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred CCEEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 44688899999 89999999999999999999654
No 32
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=77.80 E-value=5.8 Score=25.09 Aligned_cols=34 Identities=18% Similarity=0.263 Sum_probs=30.0
Q ss_pred cceEEEEEECCCCCCcCCeEEEEeCCEEEEEEecC
Q 032282 93 RGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKD 127 (144)
Q Consensus 93 ~~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~pk~ 127 (144)
-..|.-.+.|| +++.+.|+..+++|.|+|+.-+.
T Consensus 10 ~~~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~ 43 (101)
T 2wj5_A 10 PGYFSVLLDVK-HFSPEEISVKVVGDHVEVHARHE 43 (101)
T ss_dssp SSCEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred CCEEEEEEECC-CCcHHHeEEEEECCEEEEEEEEe
Confidence 34578899999 89999999999999999999775
No 33
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=77.46 E-value=13 Score=25.49 Aligned_cols=32 Identities=16% Similarity=0.172 Sum_probs=28.7
Q ss_pred eEEEEEECCCCCCcCCeEEEEeCCEEEEEEecC
Q 032282 95 DFSREIELPENVKLDQIKAHVDNGVLTVIVPKD 127 (144)
Q Consensus 95 ~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~pk~ 127 (144)
.|.-.+.|| .++.+.|+..+++|.|+|+.-+.
T Consensus 67 ~~~v~~dlP-G~~~edi~V~~~~~~L~I~g~~~ 98 (161)
T 4eld_A 67 HIKVIAWLP-GVNKEDIILNAVGDTLEIRAKRS 98 (161)
T ss_dssp EEEEEEECT-TCCGGGEEEEEETTEEEEEEECC
T ss_pred EEEEEEECC-CCChHhEEEEEECCEEEEEEEEc
Confidence 567788998 78999999999999999999877
No 34
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=74.06 E-value=6.8 Score=24.68 Aligned_cols=33 Identities=21% Similarity=0.304 Sum_probs=29.0
Q ss_pred ceEEEEEECCCCCCcCCeEEEEeCCEEEEEEecC
Q 032282 94 GDFSREIELPENVKLDQIKAHVDNGVLTVIVPKD 127 (144)
Q Consensus 94 ~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~pk~ 127 (144)
..|.-.+.|| .++.+.|+..++++.|+|+.-+.
T Consensus 16 ~~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~ 48 (102)
T 4fei_A 16 THLDLLLDVP-GVDAGTLALAEDGGQLTVSGERP 48 (102)
T ss_dssp TEEEEEEECT-TCCGGGCEEEEETTEEEEEEEEC
T ss_pred CEEEEEEECC-CCchHhEEEEEECCEEEEEEEEe
Confidence 4678899999 89999999999999999988664
No 35
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=73.27 E-value=7.6 Score=25.33 Aligned_cols=33 Identities=21% Similarity=0.328 Sum_probs=29.2
Q ss_pred ceEEEEEECCCCCCcCCeEEEEeC-CEEEEEEecC
Q 032282 94 GDFSREIELPENVKLDQIKAHVDN-GVLTVIVPKD 127 (144)
Q Consensus 94 ~~f~r~~~lP~~vd~~~i~A~~~~-GiL~I~~pk~ 127 (144)
..|.-.+.|| +++.+.|+..+.+ +.|+|+.-+.
T Consensus 34 ~~~~v~~~lP-G~~~edi~V~v~~~~~L~I~g~~~ 67 (123)
T 3aab_A 34 GYLVVVADLA-GFNKEKIKARVSGQNELIIEAERE 67 (123)
T ss_dssp TEEEEEEECC-SCCGGGCEEEEETTTEEEEEEECC
T ss_pred CEEEEEEECC-CCCHHHEEEEEeCCCEEEEEEEEe
Confidence 3577789999 7999999999999 9999999876
No 36
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=67.99 E-value=15 Score=21.97 Aligned_cols=14 Identities=36% Similarity=0.475 Sum_probs=11.9
Q ss_pred CCeEEEEeCCEEEE
Q 032282 109 DQIKAHVDNGVLTV 122 (144)
Q Consensus 109 ~~i~A~~~~GiL~I 122 (144)
..|.|.|+||+|+-
T Consensus 3 k~IeAiYEnGVfkP 16 (69)
T 2nwt_A 3 KIIEAVYENGVFKP 16 (69)
T ss_dssp CCEEEEEETTEEEE
T ss_pred ceEEEEEECCEEeE
Confidence 45999999999974
No 37
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=63.85 E-value=22 Score=24.06 Aligned_cols=32 Identities=28% Similarity=0.428 Sum_probs=27.1
Q ss_pred eEEEEEECCCCCCcCCeEEEEe-CCEEEEEEecC
Q 032282 95 DFSREIELPENVKLDQIKAHVD-NGVLTVIVPKD 127 (144)
Q Consensus 95 ~f~r~~~lP~~vd~~~i~A~~~-~GiL~I~~pk~ 127 (144)
.|.-.+.|| .++.+.|+..+. ++.|+|+.-+.
T Consensus 54 ~~~v~~dlP-Gv~kedI~V~v~~~~~L~I~g~~~ 86 (151)
T 1gme_A 54 AHVFKADLP-GVKKEEVKVEVEDGNVLVVSGERT 86 (151)
T ss_dssp EEEEEEECT-TCCGGGEEEEEETTTEEEEEECCC
T ss_pred EEEEEEECC-CCChHHEEEEEecCCEEEEEEEEc
Confidence 466688899 789999999994 67999999776
No 38
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=60.88 E-value=15 Score=25.80 Aligned_cols=33 Identities=18% Similarity=0.319 Sum_probs=29.1
Q ss_pred ceEEEEEECCCCCCcCCeEEEEeCCEEEEEEecC
Q 032282 94 GDFSREIELPENVKLDQIKAHVDNGVLTVIVPKD 127 (144)
Q Consensus 94 ~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~pk~ 127 (144)
..|.-.+.|| +++++.|+..+.+|.|+|+.-+.
T Consensus 73 d~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~ 105 (175)
T 2klr_A 73 DRFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHE 105 (175)
T ss_dssp SEEEEEECCS-SCCGGGEEEEEETTEEEEEEEEE
T ss_pred CeEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 3577889998 89999999999999999998765
No 39
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=51.33 E-value=44 Score=21.16 Aligned_cols=20 Identities=15% Similarity=0.385 Sum_probs=15.2
Q ss_pred CCCeEEEEecCCeEEEEEEec
Q 032282 50 RENIKVQIEDGNILRIIGEGA 70 (144)
Q Consensus 50 ~e~i~v~i~~g~~L~I~g~~~ 70 (144)
++.|+|++++ +.++|+|.+-
T Consensus 20 P~gV~V~i~~-~~VtVKGPkG 39 (100)
T 2cql_A 20 PENVDITLKG-RTVIVKGPRG 39 (100)
T ss_dssp CSSCEEEEET-TEEEEEETTE
T ss_pred CCCCEEEEeC-CEEEEECCCc
Confidence 4678999984 7999976544
No 40
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=48.23 E-value=33 Score=22.48 Aligned_cols=32 Identities=9% Similarity=0.100 Sum_probs=25.2
Q ss_pred cceEEEEEECCCCCCcCCeEEEEeCCEEEEEE
Q 032282 93 RGDFSREIELPENVKLDQIKAHVDNGVLTVIV 124 (144)
Q Consensus 93 ~~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~ 124 (144)
.....-+|.||.+++.+.+...+...-|.|.+
T Consensus 13 ~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~ 44 (131)
T 2o30_A 13 LNEINIQFPVTGDADSSAIKIRMVGKKICVKN 44 (131)
T ss_dssp TTEEEEEEECC---CCSCEEEEEETTEEEEEE
T ss_pred CCEEEEEEECCCCCCccceEEEEECCEEEEEE
Confidence 34567789999999999999999999999987
No 41
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=46.94 E-value=56 Score=22.95 Aligned_cols=45 Identities=20% Similarity=0.442 Sum_probs=30.4
Q ss_pred CCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCCCCCcCCeEEEEeCCEEEEEEec
Q 032282 50 RENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPK 126 (144)
Q Consensus 50 ~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~pk 126 (144)
++.|+|++++ +.++|+|.+- ..++.| |.. +....+++.|.|..+.
T Consensus 11 P~gV~V~i~~-~~VtVkGpkG------------------------~L~~~~--~~~-----v~i~~~~~~l~v~~~~ 55 (177)
T 1rl6_A 11 PAGVTVTVNG-NTVTVKGPKG------------------------ELTRTF--HPD-----MTITVEGNVITVTRPS 55 (177)
T ss_dssp CTTCEEEEET-TEEEEEETTE------------------------EEEEEC--CTT-----CEEEEETTEEEEECSC
T ss_pred CCCCEEEEeC-CEEEEECCCe------------------------EEEEEc--CCC-----EEEEEeCCEEEEEcCC
Confidence 4678999984 7899976444 444444 433 4556789998887654
No 42
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=46.57 E-value=65 Score=23.36 Aligned_cols=46 Identities=17% Similarity=0.368 Sum_probs=30.5
Q ss_pred CCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCCCCCcCCeEEEEeCCEEEEEEecC
Q 032282 50 RENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKD 127 (144)
Q Consensus 50 ~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~pk~ 127 (144)
++.|+|++++ +.++|+|.+- ..++.| +. .+....++|.|.|..+..
T Consensus 39 P~gV~V~i~~-~~VtVKGPkG------------------------~L~~~~--~~-----~v~i~~e~~~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVNAQD-GVFKVKGPKG------------------------ELTVPY--NT-----ELTVRQDGDQLLVERPSD 84 (212)
T ss_pred CCCcEEEEeC-CEEEEECCCE------------------------EEEEEC--CC-----CeEEEEECCEEEEEcCCC
Confidence 4678899984 7899976544 344444 43 355567889888876543
No 43
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=39.14 E-value=91 Score=21.86 Aligned_cols=44 Identities=16% Similarity=0.400 Sum_probs=29.3
Q ss_pred CCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCCCCCcCCeEEEEeCCEEEEEEe
Q 032282 50 RENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVP 125 (144)
Q Consensus 50 ~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~p 125 (144)
+++|+|+++ |+.++|+|.+- ..++. |+.. +....+++.|.|...
T Consensus 12 P~gV~v~i~-~~~v~VkGpkG------------------------~L~~~--~~~~-----v~i~~~~~~l~v~~~ 55 (180)
T 3v2d_H 12 PKGVSVEVA-PGRVKVKGPKG------------------------ELEVP--VSPE-----MRVVVEEGVVRVERP 55 (180)
T ss_dssp CTTCEEEEE-TTEEEEECSSC------------------------EEEEE--CCTT-----SEEEEETTEEEEECS
T ss_pred CCCcEEEEe-CCEEEEEeCCc------------------------EEEEE--eCCC-----EEEEEECCEEEEEEC
Confidence 578999998 47899965443 44444 4433 445567898888753
No 44
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=38.31 E-value=58 Score=22.16 Aligned_cols=33 Identities=12% Similarity=0.269 Sum_probs=28.6
Q ss_pred CcceEEEEEECCCCCCcCCeEEEEeCCEEEEEE
Q 032282 92 GRGDFSREIELPENVKLDQIKAHVDNGVLTVIV 124 (144)
Q Consensus 92 ~~~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~ 124 (144)
......-+|.||..+..+.+...+...-|+|.+
T Consensus 21 t~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~ 53 (157)
T 2rh0_A 21 TLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAV 53 (157)
T ss_dssp CSSEEEEEEECCTTCCGGGEEEEECSSEEEEEE
T ss_pred cCCEEEEEEECCCCCcccceEEEEecCEEEEEE
Confidence 455677889999999999999999999999987
No 45
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=37.43 E-value=56 Score=21.10 Aligned_cols=33 Identities=18% Similarity=0.323 Sum_probs=28.3
Q ss_pred cceEEEEEECCCCC-CcCCeEEEEeCCEEEEEEe
Q 032282 93 RGDFSREIELPENV-KLDQIKAHVDNGVLTVIVP 125 (144)
Q Consensus 93 ~~~f~r~~~lP~~v-d~~~i~A~~~~GiL~I~~p 125 (144)
.....-+|.||..+ +.+.+...+...-|.|.+.
T Consensus 28 ~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~ 61 (124)
T 1wgv_A 28 YTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAML 61 (124)
T ss_dssp TTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEE
T ss_pred ccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEE
Confidence 44677789999888 9999999999999999884
No 46
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=36.00 E-value=70 Score=20.58 Aligned_cols=34 Identities=12% Similarity=0.120 Sum_probs=29.4
Q ss_pred CcceEEEEEECCCC--CCcCCeEEEEeCCEEEEEEe
Q 032282 92 GRGDFSREIELPEN--VKLDQIKAHVDNGVLTVIVP 125 (144)
Q Consensus 92 ~~~~f~r~~~lP~~--vd~~~i~A~~~~GiL~I~~p 125 (144)
......-+|.||.. ++.+.+...+...-|.|.+.
T Consensus 24 t~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~k 59 (121)
T 3qor_A 24 TLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLK 59 (121)
T ss_dssp CSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEET
T ss_pred ccceEEEEEECCCCCcccccceEEEEEcCEEEEEEc
Confidence 45577888999988 89999999999999999875
No 47
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=35.73 E-value=62 Score=24.15 Aligned_cols=44 Identities=18% Similarity=0.286 Sum_probs=27.9
Q ss_pred CCCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCCC
Q 032282 49 SRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPEN 105 (144)
Q Consensus 49 ~~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~~ 105 (144)
.++++.| ++| .|+|++.+. ...+....... .+|.|+-++.||..
T Consensus 31 ~~~Nv~v--~~G-~L~L~~~k~-------tsa~i~Sk~~~---~yG~~Ear~Klp~g 74 (274)
T 2uwa_A 31 GPQHQRV--DQG-SLTIWLDST-------SGSGFKSINRY---RSGYFGANIKLQSG 74 (274)
T ss_dssp CGGGEEE--ETT-EEEEEECSS-------CCEEEEEEEEE---EEEEEEEEEECCCS
T ss_pred CCCCEEE--ECC-EEEEEEecC-------CCCEEEECceE---eeEEEEEEEEeCCC
Confidence 4566666 554 699987655 22222222344 78899999999964
No 48
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=35.69 E-value=67 Score=22.67 Aligned_cols=45 Identities=22% Similarity=0.482 Sum_probs=29.0
Q ss_pred CCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCCCCCcCCeEEEEeCCEEEEEEe
Q 032282 50 RENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVP 125 (144)
Q Consensus 50 ~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~p 125 (144)
+++++|+++ |+.++|+|.+- ..++.|.-| . +...++++.|.|...
T Consensus 14 P~gV~v~i~-~~~V~VkGpkG------------------------~L~~~~~~~-~-----v~i~~~~~~l~v~~~ 58 (184)
T 3j21_F 14 PEGVEVTVE-GYKVKVKGPKG------------------------ELEREFFWP-G-----IQIFTEDGNVVIYKD 58 (184)
T ss_dssp CSSCEEEES-SSEEEEECSSC------------------------EEEEECCCT-T-----CEEEEETTEEEEECS
T ss_pred CCCcEEEEe-CCEEEEEcCCe------------------------EEEEEecCC-c-----EEEEEeCCEEEEEEC
Confidence 478899998 57898865443 444544322 2 455578888888753
No 49
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=35.47 E-value=1.1e+02 Score=21.50 Aligned_cols=46 Identities=13% Similarity=0.247 Sum_probs=30.2
Q ss_pred CCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCCCCCcCCeEEEEeCCEEEEEEec
Q 032282 50 RENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPK 126 (144)
Q Consensus 50 ~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~pk 126 (144)
++.++|+++ |+.++|+|.+- ..++.|. +. .+....++|.|.|..+.
T Consensus 9 P~gV~v~i~-~~~vtVkGpkG------------------------~L~~~~~-~~-----~v~i~~~~~~i~v~~~~ 54 (178)
T 1vq8_E 9 PEDVDAEQD-HLDITVEGDNG------------------------SVTRRLW-YP-----DIDVSVDGDTVVIESDE 54 (178)
T ss_dssp CTTCEEEEE-TTEEEEEETTE------------------------EEEEECC-CT-----TCEEEEETTEEEEECSC
T ss_pred CCCCEEEEe-CCEEEEECCCe------------------------EEEEEEE-CC-----eEEEEEECCEEEEEcCC
Confidence 467899998 47899976544 3444442 32 34556789998887553
No 50
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=35.14 E-value=26 Score=22.48 Aligned_cols=19 Identities=26% Similarity=0.562 Sum_probs=15.9
Q ss_pred CCeEEEEeCCEEEEEEecC
Q 032282 109 DQIKAHVDNGVLTVIVPKD 127 (144)
Q Consensus 109 ~~i~A~~~~GiL~I~~pk~ 127 (144)
..+.+.+.+|+|+|+++..
T Consensus 28 ~d~D~e~~~gVLti~f~~~ 46 (106)
T 1ew4_A 28 SDIDCEINGGVLTITFENG 46 (106)
T ss_dssp SCCEEEEETTEEEEECTTS
T ss_pred CCEeeeccCCEEEEEECCC
Confidence 3488999999999999754
No 51
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=31.34 E-value=97 Score=20.08 Aligned_cols=34 Identities=9% Similarity=0.120 Sum_probs=28.3
Q ss_pred CcceEEEEEECCCC--CCcCCeEEEEeCCEEEEEEe
Q 032282 92 GRGDFSREIELPEN--VKLDQIKAHVDNGVLTVIVP 125 (144)
Q Consensus 92 ~~~~f~r~~~lP~~--vd~~~i~A~~~~GiL~I~~p 125 (144)
......-+|.||.. +..+.+...+...-|.|.+.
T Consensus 15 t~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~k 50 (131)
T 1wfi_A 15 TLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLK 50 (131)
T ss_dssp CSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEET
T ss_pred cCCEEEEEEECCCCCcccccceEEEEeCCEEEEEEC
Confidence 34456678889987 89999999999999999983
No 52
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=31.17 E-value=1.1e+02 Score=21.77 Aligned_cols=25 Identities=12% Similarity=0.185 Sum_probs=16.9
Q ss_pred cCCCCCCCeEEEEecCCeEEEEEEec
Q 032282 45 VPGYSRENIKVQIEDGNILRIIGEGA 70 (144)
Q Consensus 45 LpG~~~e~i~v~i~~g~~L~I~g~~~ 70 (144)
.|=-=++.++|++++ +.++|+|.+-
T Consensus 8 ~pI~IP~gV~V~i~~-~~VtVkGpkG 32 (192)
T 2zkr_e 8 QTVDIPENVDITLKG-RTVIVKGPRG 32 (192)
T ss_dssp --CCCCTTCEEEEET-TEEEEEETTE
T ss_pred CcEEcCCCCEEEEeC-CEEEEECCCe
Confidence 333346789999984 7999976544
No 53
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=28.88 E-value=47 Score=22.01 Aligned_cols=17 Identities=24% Similarity=0.434 Sum_probs=14.9
Q ss_pred eEEEEeCCEEEEEEecC
Q 032282 111 IKAHVDNGVLTVIVPKD 127 (144)
Q Consensus 111 i~A~~~~GiL~I~~pk~ 127 (144)
+-+.+.+|+|+|+++..
T Consensus 49 ~Dve~~~gVLti~f~~~ 65 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPAF 65 (123)
T ss_dssp CEEEECSSEEEEECTTT
T ss_pred eEEEccCCEEEEEECCC
Confidence 78899999999999754
No 54
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=27.56 E-value=1.6e+02 Score=20.75 Aligned_cols=20 Identities=25% Similarity=0.602 Sum_probs=15.3
Q ss_pred CCCeEEEEecCCeEEEEEEec
Q 032282 50 RENIKVQIEDGNILRIIGEGA 70 (144)
Q Consensus 50 ~e~i~v~i~~g~~L~I~g~~~ 70 (144)
|++++|+++ |+.++|+|.+-
T Consensus 13 P~gV~v~i~-~~~V~VkGPkG 32 (191)
T 3u5e_H 13 PEGVTVSIK-SRIVKVVGPRG 32 (191)
T ss_dssp CTTCEEEEE-TTEEEEEETTE
T ss_pred CCCcEEEEe-CCEEEEEcCCe
Confidence 578999998 58899976544
No 55
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=27.35 E-value=1.8e+02 Score=21.18 Aligned_cols=69 Identities=16% Similarity=0.143 Sum_probs=41.5
Q ss_pred EEEEE---EcCCCCCCCeEEEEe-cCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCCCCCcCCeEEE
Q 032282 39 HIFKI---DVPGYSRENIKVQIE-DGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAH 114 (144)
Q Consensus 39 ~~i~~---~LpG~~~e~i~v~i~-~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~~vd~~~i~A~ 114 (144)
|.+.+ .|||+..+=--+.++ +++.|-+..... .....-- ..+.+.++++|...-|.+.|...
T Consensus 13 y~~~~~~~~l~g~~~~lSGla~~~~~~~L~aV~d~~----------~~I~~ld----~~g~v~~~i~l~g~~D~EGIa~~ 78 (255)
T 3qqz_A 13 YHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKP----------AAIVEMT----TNGDLIRTIPLDFVKDLETIEYI 78 (255)
T ss_dssp CEEEEEEEECTTCCSCEEEEEEETTTTEEEEEEETT----------EEEEEEE----TTCCEEEEEECSSCSSEEEEEEC
T ss_pred eEEEEeceECCCcccCcceeEEeCCCCEEEEEECCC----------CeEEEEe----CCCCEEEEEecCCCCChHHeEEe
Confidence 44444 489998753337776 345666533222 2222222 34789999999877888887654
Q ss_pred EeCCEEEE
Q 032282 115 VDNGVLTV 122 (144)
Q Consensus 115 ~~~GiL~I 122 (144)
.+|.+.|
T Consensus 79 -~~g~~~v 85 (255)
T 3qqz_A 79 -GDNQFVI 85 (255)
T ss_dssp -STTEEEE
T ss_pred -CCCEEEE
Confidence 5665544
No 56
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=26.79 E-value=1.3e+02 Score=19.31 Aligned_cols=38 Identities=11% Similarity=0.227 Sum_probs=28.8
Q ss_pred EEEcCCeEEEEEEc-CCCCCCCeEEEEecCCeEEEEEEecC
Q 032282 32 WLESPSAHIFKIDV-PGYSRENIKVQIEDGNILRIIGEGAK 71 (144)
Q Consensus 32 i~e~~~~~~i~~~L-pG~~~e~i~v~i~~g~~L~I~g~~~~ 71 (144)
+...++.+.|.+.+ ||.+++.|. .+.+ +.|.|.-.-.+
T Consensus 8 ~~~~~~~v~l~v~V~P~A~r~~I~-g~~~-~~LkV~v~ApP 46 (108)
T 1n91_A 8 VTVNDDGLVLRLYIQPKASRDSIV-GLHG-DEVKVAITAPP 46 (108)
T ss_dssp EEECSSEEEEEEEEECSSSSCEEE-EECS-SCEEEECCCCS
T ss_pred EEECCCeEEEEEEEeeCCCcceee-cccC-CEEEEEEecCC
Confidence 45677888898888 899998874 4664 68999876664
No 57
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=25.67 E-value=1.8e+02 Score=20.54 Aligned_cols=20 Identities=20% Similarity=0.459 Sum_probs=15.2
Q ss_pred CCCeEEEEecCCeEEEEEEec
Q 032282 50 RENIKVQIEDGNILRIIGEGA 70 (144)
Q Consensus 50 ~e~i~v~i~~g~~L~I~g~~~ 70 (144)
|++++|+++ |+.++|+|.+-
T Consensus 13 P~gV~v~i~-~~~V~VkGPkG 32 (190)
T 3iz5_F 13 PEGVTVQVA-AKVVTVEGPRG 32 (190)
T ss_dssp CTTCEEEEE-TTEEEEEETTE
T ss_pred CCCCEEEEe-CCEEEEECCCc
Confidence 478899998 47899976543
No 58
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=24.86 E-value=88 Score=27.98 Aligned_cols=93 Identities=13% Similarity=0.182 Sum_probs=54.5
Q ss_pred CCceeeEEEcCCeEEEEEEc----------CCCCCCCeEEEEecCCeEEEEEEe-c-CCccccccCCccEEEEeecCCCc
Q 032282 26 STALMDWLESPSAHIFKIDV----------PGYSRENIKVQIEDGNILRIIGEG-A-KDKEEANTKETVWHVAERRAGGR 93 (144)
Q Consensus 26 ~~~~~~i~e~~~~~~i~~~L----------pG~~~e~i~v~i~~g~~L~I~g~~-~-~~~~~~~~~~~~~~~~e~~~~~~ 93 (144)
.-..+.|++.++.|++.+.+ |||+-.-|.|.++.+. .|.. . +......+..+.+... ..
T Consensus 807 Dl~~~~v~~~~~~~~~~~~~~~~~~npw~~~gfs~q~~~iy~~~~~----~g~~~~l~~~~~~~~~~W~~~~~-----~~ 877 (1020)
T 1ulv_A 807 DLTGVDVYDAGDDYAFVATIAGEVTNPWGGQAISHQRVNIYLGKGE----GGATPGLPGTNINLEHAWDSVIV-----TD 877 (1020)
T ss_dssp CEEEEEEEEETTEEEEEEEESSCCCCTTCCSSCSSEEEEEEEECSC----SSCEECSGGGCCEESSCEEEEEE-----EC
T ss_pred ccceeEEEEcCCEEEEEEEecccCCCCCCCCCcceeEEEEEEECCC----CCCcccCCcccCCCCCCccEEEE-----Ee
Confidence 44567899999999999998 6899999999998532 1111 0 0011110334444322 22
Q ss_pred ceEEEE-EECCCCCCcCC--eEEEEeCCEEEEEEecC
Q 032282 94 GDFSRE-IELPENVKLDQ--IKAHVDNGVLTVIVPKD 127 (144)
Q Consensus 94 ~~f~r~-~~lP~~vd~~~--i~A~~~~GiL~I~~pk~ 127 (144)
|.+... +..|..-.... |.+.-.+..++|++||+
T Consensus 878 G~~~~~~~~~~~g~~~~~~~v~~~~~~~~i~~~v~~~ 914 (1020)
T 1ulv_A 878 GRFDGAGVYAPDGTRTSAVSLLAVPEARQIVTRVPKA 914 (1020)
T ss_dssp CSTTCCEEECTTSCEEECCEEEEETTTTEEEEEEEGG
T ss_pred ccCCCcceECCCCCcCCCceEEEecCCCEEEEEEcHH
Confidence 212121 44565533332 44545688999999996
No 59
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus}
Probab=23.92 E-value=88 Score=22.73 Aligned_cols=52 Identities=15% Similarity=0.162 Sum_probs=26.7
Q ss_pred CCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCCC
Q 032282 50 RENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPEN 105 (144)
Q Consensus 50 ~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~~ 105 (144)
++++ .+.+ +.|+|++.+....... -.++....+......+|.|+-++.||..
T Consensus 46 ~~nv--~v~~-G~L~i~~~~~~~~~~~-~tS~~i~t~~~~~~~yG~~e~r~k~p~g 97 (251)
T 3iln_A 46 IENA--RVGG-GVLIIEARRESYEGRE-YTSARLVTRGKASWTYGRFEIRARLPSG 97 (251)
T ss_dssp TTTE--EEET-TEEEEEEEEEEETTEE-EEECEEECTTTCCBSSEEEEEEEECCCS
T ss_pred CcCE--EEEC-CEEEEEEEeccCCCCC-EEEEEEEECCcccccceEEEEEEEccCC
Confidence 4554 4455 5899998776100000 0111111111111267899999999953
No 60
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=23.51 E-value=53 Score=21.85 Aligned_cols=17 Identities=29% Similarity=0.440 Sum_probs=15.0
Q ss_pred CCeEEEEeCCEEEEEEe
Q 032282 109 DQIKAHVDNGVLTVIVP 125 (144)
Q Consensus 109 ~~i~A~~~~GiL~I~~p 125 (144)
..+.+.+.+|+|+|+++
T Consensus 40 ~d~D~e~~~gVLti~f~ 56 (129)
T 3t3l_A 40 EDYDVSFGSGVLTVKLG 56 (129)
T ss_dssp TTCEEEEETTEEEEECC
T ss_pred cceeeecCCCEEEEEEc
Confidence 46888999999999996
No 61
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans}
Probab=22.99 E-value=1.1e+02 Score=23.37 Aligned_cols=49 Identities=12% Similarity=0.078 Sum_probs=27.2
Q ss_pred CCCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcc-eEEEEEECCC
Q 032282 49 SRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRG-DFSREIELPE 104 (144)
Q Consensus 49 ~~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~-~f~r~~~lP~ 104 (144)
+++++.|+ +| .|+|++++..... . -.++....+.+ -.++ .|+-++.||.
T Consensus 72 ~~~Nv~v~--dG-~L~I~a~~~~~~~-~-~tSg~i~Sk~~--~~ygg~~EaR~Kl~~ 121 (308)
T 4atf_A 72 KRDRSYVA--DG-ELKMWATRKPGSD-K-INMGCITSKTR--VVYPVYIEARAKVMN 121 (308)
T ss_dssp CGGGEEEE--TT-EEEEECEECTTSS-C-EEECEEEESSC--BCSSEEEEEEEECCS
T ss_pred cccceEEE--CC-EEEEEEEecCCCC-C-EEEEEEEECce--eecCeEEEEEEECCC
Confidence 45666664 65 8999998862100 0 11122222111 2445 8999999984
No 62
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=22.82 E-value=1.6e+02 Score=19.26 Aligned_cols=30 Identities=27% Similarity=0.439 Sum_probs=19.7
Q ss_pred CeEEEE---eCCEEEEEEecCCCCCCCCcEEEeeee
Q 032282 110 QIKAHV---DNGVLTVIVPKDANHKKSSVRNINITS 142 (144)
Q Consensus 110 ~i~A~~---~~GiL~I~~pk~~~~~~~~~~~I~I~~ 142 (144)
+|...| .||+|.|++--. .. .....|.|+.
T Consensus 99 ~IeVtf~iD~nGiL~V~a~d~-~t--g~~~~i~i~~ 131 (135)
T 1q5l_A 99 QIEVTFDIDADGILHVSAKDK-NS--GKEQKITIKA 131 (135)
T ss_dssp CEEEEEEECTTSEEEEEEEET-TT--CCEEEEEEEC
T ss_pred EEEEEEEECCCCEEEEEEEEC-CC--CCEEEEEEec
Confidence 566666 799999999644 22 2345666654
No 63
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=22.37 E-value=82 Score=17.47 Aligned_cols=21 Identities=19% Similarity=0.397 Sum_probs=17.5
Q ss_pred CCCCeEEEEecCCeEEEEEEec
Q 032282 49 SRENIKVQIEDGNILRIIGEGA 70 (144)
Q Consensus 49 ~~e~i~v~i~~g~~L~I~g~~~ 70 (144)
--+||.|+.+ |+.+++.|..+
T Consensus 31 gyndinvtwd-gdtvtvegqle 51 (62)
T 2gjh_A 31 GYNDINVTWD-GDTVTVEGQLE 51 (62)
T ss_dssp TCCSCEEEEC-SSCEEEEEECC
T ss_pred CcccceeEEc-CCEEEEEeEEc
Confidence 3468999998 67999999887
No 64
>2hbp_A Cytoskeleton assembly control protein SLA1; SHD1, NPFX(1,2)D, endocytosis, protein binding; NMR {Saccharomyces cerevisiae}
Probab=21.24 E-value=44 Score=19.82 Aligned_cols=35 Identities=11% Similarity=0.372 Sum_probs=27.5
Q ss_pred eEEEcCCeEEEEEEcCCCCCCCeEEEEecCCeEEE
Q 032282 31 DWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRI 65 (144)
Q Consensus 31 ~i~e~~~~~~i~~~LpG~~~e~i~v~i~~g~~L~I 65 (144)
.|.+..+.|.|++.+-|++...|.+...+|..+.|
T Consensus 7 tWtDrtG~F~VeA~flg~~dgki~LhK~nGv~I~V 41 (68)
T 2hbp_A 7 LWVDRSGTFKVDAEFIGCAKGKIHLHKANGVKIAV 41 (68)
T ss_dssp EEEBSSSCCEEEEEEEEEETTEEEEECTTSCEEEE
T ss_pred EEEcCCCCeEEEEEEEEEeCCEEEEEecCCcEEEe
Confidence 45666779999999999998888888887755555
No 65
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=21.15 E-value=53 Score=19.56 Aligned_cols=23 Identities=26% Similarity=0.486 Sum_probs=18.1
Q ss_pred CCCCCCeEEEEecCCeEEEEEEec
Q 032282 47 GYSRENIKVQIEDGNILRIIGEGA 70 (144)
Q Consensus 47 G~~~e~i~v~i~~g~~L~I~g~~~ 70 (144)
-|+.+.|.+....| .|.|+|+.-
T Consensus 17 sFd~e~i~L~T~~G-~L~IkG~~L 39 (71)
T 2ks0_A 17 SFDPKEILLETIQG-VLSIKGEKL 39 (71)
T ss_dssp EECSSEEEEEETTE-EEEEEEECC
T ss_pred EECCCEEEEEeCce-EEEEEcCCc
Confidence 35778888888874 899998876
No 66
>1nvp_C Transcription initiation factor IIA beta chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: b.56.1.1
Probab=21.07 E-value=43 Score=20.33 Aligned_cols=15 Identities=20% Similarity=0.578 Sum_probs=12.7
Q ss_pred cCCeEEEEeCCEEEE
Q 032282 108 LDQIKAHVDNGVLTV 122 (144)
Q Consensus 108 ~~~i~A~~~~GiL~I 122 (144)
..+=++.|++|||+|
T Consensus 46 KnkWKc~LKdGim~i 60 (76)
T 1nvp_C 46 KNKWKFHLKDGIMNL 60 (76)
T ss_dssp TTEEEEEEEEEEEEE
T ss_pred CceEEEEEeccEEEE
Confidence 456789999999987
No 67
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=20.43 E-value=66 Score=23.53 Aligned_cols=46 Identities=20% Similarity=0.416 Sum_probs=29.3
Q ss_pred CCCeEEEEecCCeEEEEEEecCCccccccCCccEEEEeecCCCcceEEEEEECCCCCCcCCeEE-EEeCCEEEEEEecC
Q 032282 50 RENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKA-HVDNGVLTVIVPKD 127 (144)
Q Consensus 50 ~e~i~v~i~~g~~L~I~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~f~r~~~lP~~vd~~~i~A-~~~~GiL~I~~pk~ 127 (144)
++.|+|+++ |+.++|+|.+- ..++.| |.. |.. ..++|.|.|..+..
T Consensus 54 P~gV~V~i~-~~~VtVKGPkG------------------------~L~~~~--~~~-----v~i~~~e~~~i~v~~~~~ 100 (223)
T 3bbo_I 54 PSNVTIALE-GQDLKVKGPLG------------------------ELALTY--PRE-----VELTKEESGFLRVKKTVE 100 (223)
T ss_dssp STTSCEEES-SSEEEECCSSC------------------------CEEEEC--CSS-----CEEEECSSSCEEEECSSC
T ss_pred CCCCEEEEe-CCEEEEECCCe------------------------EEEEEc--CCC-----EEEEEecCCEEEEEcCCC
Confidence 467889998 47888865433 444444 543 344 56888888876543
No 68
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=20.18 E-value=66 Score=21.14 Aligned_cols=25 Identities=16% Similarity=0.246 Sum_probs=21.2
Q ss_pred cCCCCCCCeEEEEecCCeEEEEEEec
Q 032282 45 VPGYSRENIKVQIEDGNILRIIGEGA 70 (144)
Q Consensus 45 LpG~~~e~i~v~i~~g~~L~I~g~~~ 70 (144)
-|.+++-.|.|.+++ +.++++|.-.
T Consensus 2 ~~~~~p~~i~V~v~~-G~VTLsG~Vp 26 (132)
T 2kgs_A 2 ASALSLSLLSISRSG-NTVTLIGDFP 26 (132)
T ss_dssp CCCCCEEEEEEEECS-SEEEEEEEES
T ss_pred CCcccceeEEEEEEC-CEEEEEEECC
Confidence 366777789999997 5999999988
Done!