RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= 032282
         (144 letters)



>d1gmea_ b.15.1.1 (A:) Small heat shock protein {Wheat (Triticum
           aestivum) [TaxId: 4565]}
          Length = 150

 Score = 81.7 bits (201), Expect = 3e-21
 Identities = 58/143 (40%), Positives = 78/143 (54%), Gaps = 12/143 (8%)

Query: 4   DFFGYPFRRFFMSPPVFREWSGSTAL-----MDWLESPSAHIFKIDVPGYSRENIKVQIE 58
           D +  PF  F    P        TA      MDW E+P AH+FK D+PG  +E +KV++E
Sbjct: 14  DLWADPFDTFRSIVPAISGGGSETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVE 73

Query: 59  DGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNG 118
           DGN+L + GE     +E   K   WH  ER     G F R   L E+ K++++KA ++NG
Sbjct: 74  DGNVLVVSGE---RTKEKEDKNDKWHRVERS---SGKFVRRFRLLEDAKVEEVKAGLENG 127

Query: 119 VLTVIVPKDANHKKSSVRNINIT 141
           VLTV VPK A  KK  V+ I I+
Sbjct: 128 VLTVTVPK-AEVKKPEVKAIQIS 149


>d1shsa_ b.15.1.1 (A:) Small heat shock protein {Archaeon
           Methanococcus jannaschii [TaxId: 2190]}
          Length = 115

 Score = 65.4 bits (159), Expect = 3e-15
 Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 9/111 (8%)

Query: 30  MDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERR 89
           +  +E          +PG ++E+I +     + L I  + +      + +     + E  
Sbjct: 13  ISIIEGDQHIKVIAWLPGVNKEDIILNAVG-DTLEIRAKRSPLMITESERIIYSEIPEE- 70

Query: 90  AGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINI 140
                +  R I+LP  VK +   A  +NGVL+VI+PK  +  K   + INI
Sbjct: 71  ----EEIYRTIKLPATVKEENASAKFENGVLSVILPKAESSIK---KGINI 114


>d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris)
          [TaxId: 9615]}
          Length = 377

 Score = 27.0 bits (58), Expect = 1.0
 Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 2/38 (5%)

Query: 47 GYSRENIKVQIEDGNILRI--IGEGAKDKEEANTKETV 82
          GY  E  +V  EDG IL I  I  G K+ E    +   
Sbjct: 24 GYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVA 61


>d1rl1a_ b.15.1.3 (A:) Suppressor of G2 allele of skp1 homolog, gst1
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 92

 Score = 25.7 bits (56), Expect = 1.2
 Identities = 10/96 (10%), Positives = 34/96 (35%), Gaps = 22/96 (22%)

Query: 31  DWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRA 90
           DW ++ S  +  + +    + ++ V+  +   L  + +    ++                
Sbjct: 6   DWYQTESQVVITLMIKNVQKNDVNVEFSE-KELSALVKLPSGED---------------- 48

Query: 91  GGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPK 126
                ++ ++EL   +  +Q    V +  + + + K
Sbjct: 49  -----YNLKLELLHPIIPEQSTFKVLSTKIEIKLKK 79


>d1zjca1 e.60.1.1 (A:3-415) Aminopeptidase S, AMPS {Staphylococcus
           aureus [TaxId: 1280]}
          Length = 413

 Score = 25.0 bits (54), Expect = 4.1
 Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 47  GYSRENIKVQIEDGNILRIIGEGAKD--KEEANTKETVWHVAE 87
           G   +  K+  +DG I+    E  +   K+  NT E    + E
Sbjct: 275 GTIIDQFKLMFKDGEIIDFSAEKGEAVLKDLINTDEGSRRLGE 317


>d1feua_ b.53.1.1 (A:) Ribosomal protein TL5 (general stress protein
           CTC) {Thermus thermophilus [TaxId: 274]}
          Length = 185

 Score = 24.3 bits (52), Expect = 6.5
 Identities = 6/31 (19%), Positives = 15/31 (48%), Gaps = 3/31 (9%)

Query: 98  REIELPENVKLDQIKAHVDNGVLTVIVPKDA 128
            +++LP  V+   +    +  +  V+ P+D 
Sbjct: 153 SDLKLPPGVE---LAVSPEETIAAVVPPEDV 180


>d1ryqa_ g.41.9.3 (A:) putative DNA-directed RNA polymerase
          subunit E'' (RpoE2) {Pyrococcus furiosus [TaxId: 2261]}
          Length = 67

 Score = 23.1 bits (50), Expect = 6.8
 Identities = 8/26 (30%), Positives = 10/26 (38%)

Query: 22 EWSGSTALMDWLESPSAHIFKIDVPG 47
          EW     ++D   S  A      VPG
Sbjct: 35 EWFDLVIIVDVENSEIAKKIGAKVPG 60


>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 337

 Score = 24.4 bits (52), Expect = 6.8
 Identities = 6/17 (35%), Positives = 12/17 (70%)

Query: 54 KVQIEDGNILRIIGEGA 70
          KV + D + L+++G+G 
Sbjct: 1  KVTMNDFDYLKLLGKGT 17


>d1lj8a4 c.2.1.6 (A:1-286) Mannitol 2-dehydrogenase {Pseudomonas
          fluorescens [TaxId: 294]}
          Length = 286

 Score = 24.2 bits (52), Expect = 6.8
 Identities = 5/25 (20%), Positives = 10/25 (40%), Gaps = 3/25 (12%)

Query: 43 IDVPGYSRENIK---VQIEDGNILR 64
          + +P Y+  + +     I  G   R
Sbjct: 15 VKLPAYTLADTRQGIAHIGVGGFHR 39


>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 322

 Score = 24.4 bits (52), Expect = 7.4
 Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 13/62 (20%)

Query: 54  KVQIEDGNILRIIGEG-------AKDKEEANTKETV------WHVAERRAGGRGDFSREI 100
           KV IE+  +L+++G G        +     +T +             ++A        E 
Sbjct: 20  KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 79

Query: 101 EL 102
           ++
Sbjct: 80  QV 81


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.318    0.136    0.407 

Gapped
Lambda     K      H
   0.267   0.0599    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 571,611
Number of extensions: 25317
Number of successful extensions: 85
Number of sequences better than 10.0: 1
Number of HSP's gapped: 82
Number of HSP's successfully gapped: 12
Length of query: 144
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 67
Effective length of database: 1,350,386
Effective search space: 90475862
Effective search space used: 90475862
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (22.9 bits)