Query 032289
Match_columns 143
No_of_seqs 120 out of 396
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 19:45:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032289.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032289hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ebj_A Pyrrolidone carboxyl pe 100.0 1.9E-31 6.4E-36 211.4 11.0 114 10-137 31-149 (192)
2 4gxh_A Pyrrolidone-carboxylate 100.0 2E-31 6.8E-36 214.7 10.9 111 14-136 38-153 (216)
3 3ro0_A Pyrrolidone-carboxylate 100.0 2.4E-31 8.2E-36 215.6 11.2 112 14-137 38-154 (223)
4 1x10_A Pyrrolidone-carboxylate 100.0 2.6E-31 9E-36 212.7 10.9 112 14-137 36-152 (208)
5 3lac_A Pyrrolidone-carboxylate 100.0 3E-31 1E-35 213.6 10.9 112 14-137 37-153 (215)
6 1iu8_A Pyrrolidone-carboxylate 100.0 1.9E-31 6.6E-36 213.3 9.5 112 14-137 33-149 (206)
7 3giu_A Pyrrolidone-carboxylate 100.0 3E-31 1E-35 213.8 10.6 112 14-137 38-154 (215)
8 1a2z_A Pyrrolidone carboxyl pe 100.0 5E-31 1.7E-35 213.1 10.6 113 14-138 37-154 (220)
9 4hps_A Pyrrolidone-carboxylate 100.0 4.3E-31 1.5E-35 214.9 10.0 112 14-137 59-175 (228)
10 1nd9_A Translation initiation 24.1 42 0.0014 19.1 1.9 19 103-122 12-30 (49)
11 4a4j_A Pacszia, cation-transpo 22.1 60 0.002 18.8 2.4 20 103-122 48-67 (69)
12 2fi0_A Conserved domain protei 20.5 54 0.0019 21.4 2.1 20 103-122 59-78 (81)
No 1
>2ebj_A Pyrrolidone carboxyl peptidase; TTHA08 degradation of proteins and peptides, structural genomics; 1.90A {Thermus thermophilus}
Probab=99.97 E-value=1.9e-31 Score=211.44 Aligned_cols=114 Identities=22% Similarity=0.244 Sum_probs=103.7
Q ss_pred ceeeeeEEEEeecccchHHHHHHHHHHhhcccCCCCCccEEEEecccCCCCCcccceeeeecCCCCCCCCCCCCccccee
Q 032289 10 GVTLGSCTVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQIPV 89 (143)
Q Consensus 10 ~~~~~~~~VLeVS~~~a~~~L~~~ie~~v~~~~~~~~p~vvLhlGva~Gr~~i~lErvAiN~~dfriPDn~G~qP~depI 89 (143)
+..+ ...+|+|+ +.+.+.+.+++++ .+||+|||+|||+||+.|++||+|+|+.|||+|||+|++|.++||
T Consensus 31 ~~~i-~~~~lPv~-~~~~~~l~~~~~~--------~~pd~vi~~G~a~~r~~i~~Er~A~N~~~~~~pDn~G~~p~~~~i 100 (192)
T 2ebj_A 31 GKPL-RKAVLPVD-AEALGEALEDLHR--------EGPKAVLHLGLAEDRPVLTLERLAVNLLDFPRPDNRGRVLEDLPI 100 (192)
T ss_dssp TEEE-EEEEECSC-HHHHHHHHHHHHT--------TCCSEEEEEEECTTCSSEEEECEEESCBCCSSCCTTCCCCCSBCS
T ss_pred CcEE-EEEEeccc-ccHHHHHHHHHHH--------hCCCEEEEeccCCCCceEEeEEEEEcCCCccCCCCCCCCCCCCce
Confidence 4444 44569999 9999999888874 789999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCcceeecCCcHHHHHHHHhhCCCccce-----eehhhhhhHHHHHh
Q 032289 90 VLEDGGISRSRQAVSFAIMSITTHFGLQSRRVTS-----RCLSMFLSSQQLMK 137 (143)
Q Consensus 90 ~~~~~~gp~ayf~ttLPv~~iv~~l~~~gipv~~-----~~~~~~~~~~~~~~ 137 (143)
+++ ||++|| |+||+++|+++|++.|+|++- +++|+|++|++|..
T Consensus 101 ~~~---gp~~~~-t~lp~~~iv~~l~~~g~p~~vS~~AG~ylCN~i~Y~sL~~ 149 (192)
T 2ebj_A 101 VPG---GPLALP-ARFPVKPVLARWREAGIPGRPSLSAGSYLCNQAFYLSLYR 149 (192)
T ss_dssp STT---SCSEEE-CBSCHHHHHHHHHHTTCCEEEESCCCSSHHHHHHHHHHHH
T ss_pred eCC---CCceeE-cCCCHHHHHHHHHHCCCCEEEeCCCCccHHHHHHHHHHHh
Confidence 998 899999 999999999999999999987 88899988888754
No 2
>4gxh_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 2.70A {Xenorhabdus bovienii}
Probab=99.97 E-value=2e-31 Score=214.74 Aligned_cols=111 Identities=18% Similarity=0.222 Sum_probs=103.8
Q ss_pred eeEEEEeecccchHHHHHHHHHHhhcccCCCCCccEEEEecccCCCCCcccceeeeecCCCCCCCCCCCCcccceeecCC
Q 032289 14 GSCTVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQIPVVLED 93 (143)
Q Consensus 14 ~~~~VLeVS~~~a~~~L~~~ie~~v~~~~~~~~p~vvLhlGva~Gr~~i~lErvAiN~~dfriPDn~G~qP~depI~~~~ 93 (143)
+....|+|+++.+.+.+.++|++ .+|++|||+|||+||+.|++||+|+|..|||+|||+|++|.++||+++
T Consensus 38 i~~~~lPv~~~~~~~~l~~~i~~--------~~Pd~vi~~G~a~gr~~i~~Er~A~N~~~~r~pDn~G~~p~~~~i~~~- 108 (216)
T 4gxh_A 38 IEICQIPCIFDTSLEHLYAAVDK--------YQPELVISVGQAGGRTNITVERVAININDARIPDNAGNQPIDTPVIVD- 108 (216)
T ss_dssp EEEEEECSSTTHHHHHHHHHHHH--------HCCSEEEEEEECTTCSSEEEECEEESCBCCSSCCTTSCCCCSBCSSTT-
T ss_pred EEEEecCccHHHHHHHHHHHHHh--------hCCCEEEEeccCCCCCcceeEEEEcccCcccCCccCCCCCCCCcccCC-
Confidence 34678999999999999998886 789999999999999999999999999999999999999999999998
Q ss_pred CCCCcceeecCCcHHHHHHHHhhCCCccce-----eehhhhhhHHHHH
Q 032289 94 GGISRSRQAVSFAIMSITTHFGLQSRRVTS-----RCLSMFLSSQQLM 136 (143)
Q Consensus 94 ~~gp~ayf~ttLPv~~iv~~l~~~gipv~~-----~~~~~~~~~~~~~ 136 (143)
||++|| |+||+++|+++|+++|+|++- +++|+|++|++|-
T Consensus 109 --gp~~~~-t~Lpv~~iv~~l~~~gipa~vS~dAG~ylCN~i~Y~sL~ 153 (216)
T 4gxh_A 109 --GPAAYF-SRLPIKTMVNALNTAGIPASVSQTAGTFVCNHVMYGLLH 153 (216)
T ss_dssp --CCSEEE-CCSCHHHHHHHHHHTTCCEEEESCCCSSHHHHHHHHHHH
T ss_pred --Cchhee-cCCCHHHHHHHHHHCCCCEEEeCCCcccHHHHHHHHHHH
Confidence 899999 999999999999999999976 8888888888874
No 3
>3ro0_A Pyrrolidone-carboxylate peptidase; hydrolase-hydrolase inhibitor complex; HET: TPT; 1.50A {Bacillus amyloliquefaciens} SCOP: c.56.4.1 PDB: 3rnz_A* 1aug_A
Probab=99.97 E-value=2.4e-31 Score=215.57 Aligned_cols=112 Identities=17% Similarity=0.110 Sum_probs=104.2
Q ss_pred eeEEEEeecccchHHHHHHHHHHhhcccCCCCCccEEEEecccCCCCCcccceeeeecCCCCCCCCCCCCcccceeecCC
Q 032289 14 GSCTVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQIPVVLED 93 (143)
Q Consensus 14 ~~~~VLeVS~~~a~~~L~~~ie~~v~~~~~~~~p~vvLhlGva~Gr~~i~lErvAiN~~dfriPDn~G~qP~depI~~~~ 93 (143)
+....|+|+++.+.+.+.++|++ .+||+|||+|+|+||+.|++||+|+|.+|+|+|||+|++|.++||.++
T Consensus 38 i~~~~lPv~y~~~~~~l~~~i~~--------~~Pd~VihvG~aggr~~i~lEr~A~N~~d~ripDn~G~~P~d~~i~~~- 108 (223)
T 3ro0_A 38 IVSEQVPTVFYKSLAVLREAMKK--------HQPDIIICVGQAGGRMQITPERVAINLNEARIPDNEGNQPVGEDISQG- 108 (223)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHH--------HCCSEEEEEEECTTCCSBEEBSEEESCBCCSSCCTTSCCCCSBCSSTT-
T ss_pred EEEEEeeeEehhHHHHHHHHHHH--------hCCCEEEEeccCCCCceEEEEEEEecCCCCCCCCCCCCCCCCCCCcCC-
Confidence 44678999999999999888875 789999999999999999999999999999999999999999999998
Q ss_pred CCCCcceeecCCcHHHHHHHHhhCCCccce-----eehhhhhhHHHHHh
Q 032289 94 GGISRSRQAVSFAIMSITTHFGLQSRRVTS-----RCLSMFLSSQQLMK 137 (143)
Q Consensus 94 ~~gp~ayf~ttLPv~~iv~~l~~~gipv~~-----~~~~~~~~~~~~~~ 137 (143)
||++|| |+||+++|+++|+++|+|++- +++|+|+||++|-.
T Consensus 109 --Gp~a~~-stLpv~~~v~~l~~~gipa~vS~dAG~yvCN~iyY~sL~~ 154 (223)
T 3ro0_A 109 --GPAAYW-TGLPIKRIVEEIKKEGIPAAVSYTAGTFVCNHLFYGLMDE 154 (223)
T ss_dssp --SCSEEE-CCSCHHHHHHHHHHTTCCBCCBSCCCSSHHHHHHHHHHHH
T ss_pred --CCceee-cCCCHHHHHHHHHHCCCCEEEeCCCCcccchHHHHHHHHH
Confidence 899999 999999999999999999976 88888888888764
No 4
>1x10_A Pyrrolidone-carboxylate peptidase; stability of protein, hydrolase; 2.00A {Pyrococcus furiosus} PDB: 1z8t_A 1z8x_A 1ioi_A 1x12_A 1z8w_A 2eo8_A 1iof_A 2df5_A
Probab=99.97 E-value=2.6e-31 Score=212.66 Aligned_cols=112 Identities=27% Similarity=0.226 Sum_probs=103.4
Q ss_pred eeEEEEeecccchHHHHHHHHHHhhcccCCCCCccEEEEecccCCCCCcccceeeeecCCCCCCCCCCCCcccceeecCC
Q 032289 14 GSCTVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQIPVVLED 93 (143)
Q Consensus 14 ~~~~VLeVS~~~a~~~L~~~ie~~v~~~~~~~~p~vvLhlGva~Gr~~i~lErvAiN~~dfriPDn~G~qP~depI~~~~ 93 (143)
+...+|+|+++.+.+.+.+++++ .+||+|||+|+|+||+.|++||+|+|..|||+|||+|++|.++||+++
T Consensus 36 i~~~~lPv~~~~~~~~l~~~~~~--------~~pd~vi~vG~a~gr~~i~iEr~A~N~~~~~~pDn~G~~p~~~~i~~~- 106 (208)
T 1x10_A 36 VFGRVLPVVFGKAKEVLEKTLEE--------IKPDIAIHVGLAPGRSAISIERIAVNAIDARIPDNEGKKIEDEPIVPG- 106 (208)
T ss_dssp EEEEEECSSTTHHHHHHHHHHHH--------HCCSEEEEEEECTTCCSEEEECEEESCBCCSSCCTTSCCCCSBCSSTT-
T ss_pred EEEEEEeeEHHHHHHHHHHHHHH--------hCCCEEEEecCCCCCceEEeEEEEEcCCCcccCCCCCCCCCCCceeCC-
Confidence 34568999999999999888875 689999999999999999999999999999999999999999999988
Q ss_pred CCCCcceeecCCcHHHHHHHHhhCCCccce-----eehhhhhhHHHHHh
Q 032289 94 GGISRSRQAVSFAIMSITTHFGLQSRRVTS-----RCLSMFLSSQQLMK 137 (143)
Q Consensus 94 ~~gp~ayf~ttLPv~~iv~~l~~~gipv~~-----~~~~~~~~~~~~~~ 137 (143)
||++|| ||||+++|+++|+++|+|++- +++|+|++|.+|..
T Consensus 107 --gp~~~~-ttlpi~~iv~~l~~~gi~~~vS~~AG~ylCN~i~Y~sL~~ 152 (208)
T 1x10_A 107 --APTAYF-STLPIKKIMKKLHERGIPAYISNSAGLYLSNYVMYLSLHH 152 (208)
T ss_dssp --SCSEEE-CCSCHHHHHHHHHHTTCCEEEESCCCSSHHHHHHHHHHHH
T ss_pred --CCceeE-cCCCHHHHHHHHHhCCCCEEEecCCCcchhhHHHHHHHHH
Confidence 899999 999999999999999999987 88888888887754
No 5
>3lac_A Pyrrolidone-carboxylate peptidase; alpha beta class, three layer sandwich, hydrolase, protease, thiol protease, structural genomics; 2.00A {Bacillus anthracis}
Probab=99.97 E-value=3e-31 Score=213.60 Aligned_cols=112 Identities=17% Similarity=0.167 Sum_probs=104.4
Q ss_pred eeEEEEeecccchHHHHHHHHHHhhcccCCCCCccEEEEecccCCCCCcccceeeeecCCCCCCCCCCCCcccceeecCC
Q 032289 14 GSCTVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQIPVVLED 93 (143)
Q Consensus 14 ~~~~VLeVS~~~a~~~L~~~ie~~v~~~~~~~~p~vvLhlGva~Gr~~i~lErvAiN~~dfriPDn~G~qP~depI~~~~ 93 (143)
+....|+|+++.+.+.+.+++++ .+|++|||+|+|+||+.|++||+|+|.+|||+|||+|++|.++||.++
T Consensus 37 i~~~~lPv~y~~~~~~l~~~~~~--------~~Pd~VihvG~aggr~~i~lEr~A~N~~d~~~pDn~G~~P~~~~i~~~- 107 (215)
T 3lac_A 37 IISKQVPTVFHKSISVLKEYIEE--------LAPEFIICIGQAGGRPDITIERVAINIDDARIADNEGNQPVDVPVVEE- 107 (215)
T ss_dssp EEEEEECSSTTHHHHHHHHHHHH--------HCCSEEEEEEECTTCSSEEEECEEESCBCCSSCCTTSCCCSSBCSSTT-
T ss_pred EEEEEEeeEhHHHHHHHHHHHHh--------hCCCeEEEeccCCCCceEEEEEEEeccCCCcCCCcCCCCCCCCcCcCC-
Confidence 45678999999999999888875 789999999999999999999999999999999999999999999998
Q ss_pred CCCCcceeecCCcHHHHHHHHhhCCCccce-----eehhhhhhHHHHHh
Q 032289 94 GGISRSRQAVSFAIMSITTHFGLQSRRVTS-----RCLSMFLSSQQLMK 137 (143)
Q Consensus 94 ~~gp~ayf~ttLPv~~iv~~l~~~gipv~~-----~~~~~~~~~~~~~~ 137 (143)
||++|| |+||+++|+++|+++|+|++- +++|+|++|++|-.
T Consensus 108 --Gp~~~~-s~Lpv~~~v~~l~~~gipa~vS~dAG~yvCN~i~Y~sL~~ 153 (215)
T 3lac_A 108 --GPAAYW-STLPMKAIVKKLQEEGIPASVSQTAGTFVCNHLFYGLMHE 153 (215)
T ss_dssp --SCSEEE-CCSCHHHHHHHHHHTTCCEEEESCCCSSHHHHHHHHHHHH
T ss_pred --CCceee-cCCCHHHHHHHHHhCCCcEEEcCCCCccccHHHHHHHHHH
Confidence 899999 999999999999999999976 88888888888854
No 6
>1iu8_A Pyrrolidone-carboxylate peptidase; hydrolase, thiol protease, complete proteome; 1.60A {Pyrococcus horikoshii} SCOP: c.56.4.1
Probab=99.97 E-value=1.9e-31 Score=213.34 Aligned_cols=112 Identities=23% Similarity=0.219 Sum_probs=103.4
Q ss_pred eeEEEEeecccchHHHHHHHHHHhhcccCCCCCccEEEEecccCCCCCcccceeeeecCCCCCCCCCCCCcccceeecCC
Q 032289 14 GSCTVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQIPVVLED 93 (143)
Q Consensus 14 ~~~~VLeVS~~~a~~~L~~~ie~~v~~~~~~~~p~vvLhlGva~Gr~~i~lErvAiN~~dfriPDn~G~qP~depI~~~~ 93 (143)
+....|+|+++.+.+.+.++|++ .+||+|||+|+|+||+.|++||+|+|..|||+|||+|++|.++||+++
T Consensus 33 i~~~~lPv~~~~~~~~l~~~~~~--------~~Pd~vi~vG~a~gr~~i~~Er~A~N~~~~~~pDn~G~~p~~~~i~~~- 103 (206)
T 1iu8_A 33 VVGEILPVSFKRAREKLLKVLDD--------VRPDITINLGLAPGRTHISVERVAVNMIDARIPDNDGEQPKDEPIVEG- 103 (206)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHH--------HCCSEEEEEEECTTCSSEEEECEEESCEECSSCCTTSCCCEEECSSTT-
T ss_pred EEEEEEEeEHHHHHHHHHHHHHH--------hCCCEEEEcccCCCCceEEEEEEEecCCCCccCCCCCCCCCCCceeCC-
Confidence 34568999999999999888875 689999999999999999999999999999999999999999999988
Q ss_pred CCCCcceeecCCcHHHHHHHHhhCCCccce-----eehhhhhhHHHHHh
Q 032289 94 GGISRSRQAVSFAIMSITTHFGLQSRRVTS-----RCLSMFLSSQQLMK 137 (143)
Q Consensus 94 ~~gp~ayf~ttLPv~~iv~~l~~~gipv~~-----~~~~~~~~~~~~~~ 137 (143)
||++|| |+||+++|+++|++.|+|++- +++|+|++|++|..
T Consensus 104 --gp~~~~-t~Lpi~~iv~~l~~~gip~~vS~~AG~ylCN~i~Y~sL~~ 149 (206)
T 1iu8_A 104 --GPAAYF-ATIPTREIVEEMKKNGIPAVLSYTAGTYLCNFAMYLTLHT 149 (206)
T ss_dssp --CCSEEE-CCSCHHHHHHHHHHTTCCEEEESCCCSSHHHHHHHHHHHH
T ss_pred --CCceeE-cCCCHHHHHHHHHhCCCCEEEeCCCCccHhhHHHHHHHHH
Confidence 899999 999999999999999999987 88888888877754
No 7
>3giu_A Pyrrolidone-carboxylate peptidase; IDP00836, hydrolase, PROT thiol protease, structural genomics; HET: MSE PG4; 1.25A {Staphylococcus aureus subsp} SCOP: c.56.4.0
Probab=99.97 E-value=3e-31 Score=213.76 Aligned_cols=112 Identities=17% Similarity=0.076 Sum_probs=104.1
Q ss_pred eeEEEEeecccchHHHHHHHHHHhhcccCCCCCccEEEEecccCCCCCcccceeeeecCCCCCCCCCCCCcccceeecCC
Q 032289 14 GSCTVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQIPVVLED 93 (143)
Q Consensus 14 ~~~~VLeVS~~~a~~~L~~~ie~~v~~~~~~~~p~vvLhlGva~Gr~~i~lErvAiN~~dfriPDn~G~qP~depI~~~~ 93 (143)
+...+|+|+++.+.+.+.++|++ .+|++|||+|+|+||+.|++||+|+|.+|+|+|||+|++|.++||.++
T Consensus 38 i~~~~lPv~~~~~~~~l~~~i~~--------~~Pd~Vi~vG~a~gr~~i~lEr~A~N~~~~~~pDn~G~~p~~~~i~~~- 108 (215)
T 3giu_A 38 IDKLKLPTSFKKVDNIINKTLAS--------NHYDVVLAIGQAGGRNAITPERVAINIDDARIPDNDDFQPIDQAIHLD- 108 (215)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHH--------SCCSEEEEEEECTTCCSBEEBCEEESCEECSSCCTTSCCCEEECSCTT-
T ss_pred EEEEEeceehHhHHHHHHHHHHH--------hCCCEEEEeccCCCCceEEEEEEEeccCCCCCCCCCCCCCCCCcccCC-
Confidence 34578999999999999888875 889999999999999999999999999999999999999999999998
Q ss_pred CCCCcceeecCCcHHHHHHHHhhCCCccce-----eehhhhhhHHHHHh
Q 032289 94 GGISRSRQAVSFAIMSITTHFGLQSRRVTS-----RCLSMFLSSQQLMK 137 (143)
Q Consensus 94 ~~gp~ayf~ttLPv~~iv~~l~~~gipv~~-----~~~~~~~~~~~~~~ 137 (143)
||++|| |+||+++|+++|+++|+|++- +++|+|+||++|-.
T Consensus 109 --gp~~~~-stLpv~~iv~~l~~~gipa~vS~dAG~yvCN~i~Y~sL~~ 154 (215)
T 3giu_A 109 --GAPAYF-SNLPVKAMTQSIINQGLPGALSNSAGTFVCNHTLYHLGYL 154 (215)
T ss_dssp --SCSEEE-CCSCHHHHHHHHHHTTCCBCCBSCCCSSHHHHHHHHHHHH
T ss_pred --Cccccc-cCCCHHHHHHHHHHcCCCEEEeCCCCccccHHHHHHHHHH
Confidence 899999 999999999999999999976 88888888888764
No 8
>1a2z_A Pyrrolidone carboxyl peptidase; N-pyroglutamate hydrolysis; 1.73A {Thermococcus litoralis} SCOP: c.56.4.1
Probab=99.97 E-value=5e-31 Score=213.08 Aligned_cols=113 Identities=22% Similarity=0.196 Sum_probs=103.9
Q ss_pred eeEEEEeecccchHHHHHHHHHHhhcccCCCCCccEEEEecccCCCCCcccceeeeecCCCCCCCCCCCCcccceeecCC
Q 032289 14 GSCTVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQIPVVLED 93 (143)
Q Consensus 14 ~~~~VLeVS~~~a~~~L~~~ie~~v~~~~~~~~p~vvLhlGva~Gr~~i~lErvAiN~~dfriPDn~G~qP~depI~~~~ 93 (143)
+...+|+|+++.+.+.+.+++++ .+||+|||+|||+||+.|++||+|+|..|||+|||+|++|.++||+++
T Consensus 37 i~~~~lPv~~~~~~~~l~~~i~~--------~~Pd~Vi~vG~aggr~~i~lEr~A~N~~~~~~pDn~G~~p~~~~i~~~- 107 (220)
T 1a2z_A 37 VYGRVLPVSVKRATIELKRYLEE--------IKPEIVINLGLAPTYSNITVERIAVNIIDARIPDNDGYQPIDEKIEED- 107 (220)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHH--------HCCSEEEEEEECTTCSSEEEECEEESCBCCSSCCTTSCCCSSBCSCTT-
T ss_pred EEEEEEEeEHHHHHHHHHHHHHH--------hCCCEEEEecCCCCCceEEEEEEEccCCCCCcCCCCCCCCCCCCccCC-
Confidence 34568999999999999888875 689999999999999999999999999999999999999999999988
Q ss_pred CCCCcceeecCCcHHHHHHHHhhCCCccce-----eehhhhhhHHHHHhh
Q 032289 94 GGISRSRQAVSFAIMSITTHFGLQSRRVTS-----RCLSMFLSSQQLMKT 138 (143)
Q Consensus 94 ~~gp~ayf~ttLPv~~iv~~l~~~gipv~~-----~~~~~~~~~~~~~~~ 138 (143)
||++|| |+||+++|+++|+++|+|++- +++|+|++|++|...
T Consensus 108 --gp~~~~-ttLpi~~iv~~l~~~gip~~vS~~AG~ylCN~i~Y~sL~~~ 154 (220)
T 1a2z_A 108 --APLAYM-ATLPVRAITKTLRDNGIPATISYSAGTYLCNYVMFKTLHFS 154 (220)
T ss_dssp --SCSEEE-CCSCHHHHHHHHHHTTCCEEEESCCCSSHHHHHHHHHHHHH
T ss_pred --CCceeE-cCCCHHHHHHHHHHCCCCEEEeCCCCcchhhHHHHHHHHHH
Confidence 899999 999999999999999999987 888888888877643
No 9
>4hps_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 1.55A {Xenorhabdus bovienii} PDB: 4gxh_A
Probab=99.97 E-value=4.3e-31 Score=214.85 Aligned_cols=112 Identities=18% Similarity=0.214 Sum_probs=104.1
Q ss_pred eeEEEEeecccchHHHHHHHHHHhhcccCCCCCccEEEEecccCCCCCcccceeeeecCCCCCCCCCCCCcccceeecCC
Q 032289 14 GSCTVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQIPVVLED 93 (143)
Q Consensus 14 ~~~~VLeVS~~~a~~~L~~~ie~~v~~~~~~~~p~vvLhlGva~Gr~~i~lErvAiN~~dfriPDn~G~qP~depI~~~~ 93 (143)
+....|+|+++.+.+.+.++|++ .+|++|||+|+|+||+.|++||+|+|++|||+|||+|++|.++||.++
T Consensus 59 i~~~~lPv~y~~~~~~l~~~i~~--------~~Pd~VihvG~aggr~~i~lEr~A~N~~d~~~pDn~G~~P~~~~i~~~- 129 (228)
T 4hps_A 59 IEICQIPCIFDTSLEHLYAAVDK--------YQPELVISVGQAGGRTNITVERVAININDARIPDNAGNQPIDTPVIVD- 129 (228)
T ss_dssp EEEEEECSSTTHHHHHHHHHHHH--------HCCSEEEEEEECTTCSSEEEECEEESCEECSSCCTTSCCCEEECSSTT-
T ss_pred EEEEEcceEeHHHHHHHHHHHHh--------hCCCEEEEeccCCCCceEEEEEEEeccCCCCCCCcCCCCCCCCcCcCC-
Confidence 45678999999999999888875 789999999999999999999999999999999999999999999998
Q ss_pred CCCCcceeecCCcHHHHHHHHhhCCCccce-----eehhhhhhHHHHHh
Q 032289 94 GGISRSRQAVSFAIMSITTHFGLQSRRVTS-----RCLSMFLSSQQLMK 137 (143)
Q Consensus 94 ~~gp~ayf~ttLPv~~iv~~l~~~gipv~~-----~~~~~~~~~~~~~~ 137 (143)
||++|| |+||+++|+++|++.|+|++- +++|+|++|++|-.
T Consensus 130 --Gp~a~~-stLpvk~~v~~l~~~Gipa~vS~dAGtYvCN~iyY~sL~~ 175 (228)
T 4hps_A 130 --GPAAYF-SRLPIKTMVNALNTAGIPASVSQTAGTFVCNHVMYGLLHY 175 (228)
T ss_dssp --CCSEEE-CCSCHHHHHHHHHHTTCCEEEESCCCSSHHHHHHHHHHHH
T ss_pred --CCceee-eCCCHHHHHHHHHHcCCcEEEeCCCCcchhHHHHHHHHHH
Confidence 899999 999999999999999999976 88888888888754
No 10
>1nd9_A Translation initiation factor IF-2; NMR {Escherichia coli} SCOP: a.6.1.6
Probab=24.13 E-value=42 Score=19.06 Aligned_cols=19 Identities=5% Similarity=0.027 Sum_probs=16.3
Q ss_pred cCCcHHHHHHHHhhCCCccc
Q 032289 103 VSFAIMSITTHFGLQSRRVT 122 (143)
Q Consensus 103 ttLPv~~iv~~l~~~gipv~ 122 (143)
-.+|.+++++.|++.|+ +.
T Consensus 12 l~~~~k~l~~~l~~~g~-~k 30 (49)
T 1nd9_A 12 RQTSVERLVQQFADAGI-RK 30 (49)
T ss_dssp HSSSHHHHHHHHHHHTS-CC
T ss_pred HCcCHHHHHHHHHHcCC-CC
Confidence 45899999999999999 53
No 11
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=22.13 E-value=60 Score=18.78 Aligned_cols=20 Identities=5% Similarity=-0.157 Sum_probs=17.0
Q ss_pred cCCcHHHHHHHHhhCCCccc
Q 032289 103 VSFAIMSITTHFGLQSRRVT 122 (143)
Q Consensus 103 ttLPv~~iv~~l~~~gipv~ 122 (143)
+.++..+|.+++++.|++++
T Consensus 48 ~~~~~~~i~~~i~~~Gy~~~ 67 (69)
T 4a4j_A 48 GETTPQILTDAVERAGYHAR 67 (69)
T ss_dssp TTCCHHHHHHHHHHTTCEEE
T ss_pred CCCCHHHHHHHHHHcCCceE
Confidence 55778999999999999875
No 12
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=20.46 E-value=54 Score=21.39 Aligned_cols=20 Identities=10% Similarity=0.072 Sum_probs=17.6
Q ss_pred cCCcHHHHHHHHhhCCCccc
Q 032289 103 VSFAIMSITTHFGLQSRRVT 122 (143)
Q Consensus 103 ttLPv~~iv~~l~~~gipv~ 122 (143)
..+++.++++.|++.|+-+.
T Consensus 59 ~gid~d~l~~~L~~~g~~~~ 78 (81)
T 2fi0_A 59 AGTPMDKIVRTLEANGYEVI 78 (81)
T ss_dssp HTCCHHHHHHHHHHTTCEEE
T ss_pred cCCCHHHHHHHHHHcCCEee
Confidence 55899999999999999775
Done!