Query 032291
Match_columns 143
No_of_seqs 115 out of 137
Neff 3.2
Searched_HMMs 29240
Date Mon Mar 25 19:48:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032291.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032291hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nyi_A Unknown protein; protei 98.2 1.7E-06 5.8E-11 66.2 6.1 54 86-139 88-143 (195)
2 1u8s_A Glycine cleavage system 98.1 6.1E-06 2.1E-10 62.0 7.0 55 85-139 87-145 (192)
3 2ko1_A CTR148A, GTP pyrophosph 97.6 0.00019 6.3E-09 46.5 6.7 46 91-136 5-50 (88)
4 1zpv_A ACT domain protein; str 97.5 0.00056 1.9E-08 45.0 7.4 45 91-135 5-49 (91)
5 1u8s_A Glycine cleavage system 97.3 0.0006 2.1E-08 51.1 7.0 49 91-139 6-54 (192)
6 2jhe_A Transcription regulator 97.1 0.00081 2.8E-08 47.4 5.4 36 94-129 3-38 (190)
7 2nyi_A Unknown protein; protei 96.9 0.0028 9.7E-08 48.2 7.2 48 91-138 5-52 (195)
8 3p96_A Phosphoserine phosphata 94.3 0.06 2.1E-06 44.0 5.3 41 91-131 12-52 (415)
9 2f1f_A Acetolactate synthase i 93.9 0.11 3.6E-06 39.9 5.7 36 93-128 5-40 (164)
10 3o1l_A Formyltetrahydrofolate 93.4 0.11 3.7E-06 43.3 5.4 36 92-127 23-58 (302)
11 2pc6_A Probable acetolactate s 92.9 0.19 6.4E-06 38.7 5.6 34 93-126 6-39 (165)
12 1y7p_A Hypothetical protein AF 92.7 0.096 3.3E-06 42.9 4.0 36 93-128 6-41 (223)
13 3n0v_A Formyltetrahydrofolate 92.7 0.17 5.8E-06 41.6 5.5 36 92-127 9-44 (286)
14 2f06_A Conserved hypothetical 92.6 0.33 1.1E-05 34.4 6.2 34 92-125 73-106 (144)
15 3lou_A Formyltetrahydrofolate 92.6 0.17 5.7E-06 41.8 5.3 37 91-127 10-46 (292)
16 2f06_A Conserved hypothetical 92.4 0.43 1.5E-05 33.7 6.7 35 92-126 7-41 (144)
17 3nrb_A Formyltetrahydrofolate 92.4 0.25 8.6E-06 40.5 6.2 36 91-126 7-42 (287)
18 3obi_A Formyltetrahydrofolate 92.2 0.33 1.1E-05 39.9 6.5 36 92-127 7-42 (288)
19 1sc6_A PGDH, D-3-phosphoglycer 88.4 1.3 4.3E-05 37.7 7.1 61 74-137 317-377 (404)
20 2fgc_A Acetolactate synthase, 85.9 2.7 9.1E-05 33.4 7.2 34 92-125 30-63 (193)
21 2qmx_A Prephenate dehydratase; 83.9 1 3.5E-05 37.1 4.1 48 90-137 199-247 (283)
22 2qmw_A PDT, prephenate dehydra 83.9 1.2 4E-05 36.5 4.5 49 89-137 184-236 (267)
23 3k5p_A D-3-phosphoglycerate de 83.4 3.6 0.00012 35.5 7.5 56 74-131 328-383 (416)
24 3mwb_A Prephenate dehydratase; 80.9 1.7 5.7E-05 36.4 4.4 48 90-137 200-249 (313)
25 2re1_A Aspartokinase, alpha an 77.1 2.1 7.2E-05 31.4 3.5 35 90-124 24-59 (167)
26 3luy_A Probable chorismate mut 77.1 2.3 7.7E-05 35.9 4.1 39 99-137 216-255 (329)
27 2dt9_A Aspartokinase; protein- 69.9 2.8 9.7E-05 30.6 2.6 35 89-123 14-49 (167)
28 2dtj_A Aspartokinase; protein- 69.6 3.3 0.00011 30.7 3.0 37 89-125 13-50 (178)
29 1phz_A Protein (phenylalanine 67.1 2.7 9.1E-05 37.1 2.3 54 84-137 27-81 (429)
30 2re1_A Aspartokinase, alpha an 65.5 5.9 0.0002 28.9 3.6 39 79-121 95-136 (167)
31 3p96_A Phosphoserine phosphata 63.2 26 0.00088 28.4 7.3 48 90-137 100-148 (415)
32 1ygy_A PGDH, D-3-phosphoglycer 57.5 24 0.00083 30.5 6.6 41 87-127 450-490 (529)
33 3mtj_A Homoserine dehydrogenas 55.0 11 0.00038 32.6 4.1 47 93-139 361-409 (444)
34 2dt9_A Aspartokinase; protein- 52.0 14 0.00049 26.7 3.7 38 80-121 88-128 (167)
35 2dtj_A Aspartokinase; protein- 50.8 11 0.00039 27.8 3.0 39 79-121 87-128 (178)
36 1wj5_A Hypothetical protein (r 46.6 7.8 0.00027 29.2 1.5 34 102-141 77-110 (120)
37 3rri_A Glyoxalase/bleomycin re 43.5 63 0.0022 20.8 5.9 39 103-141 79-119 (135)
38 3kol_A Oxidoreductase, glyoxal 37.1 71 0.0024 20.7 5.0 35 104-141 108-142 (156)
39 3s1t_A Aspartokinase; ACT doma 34.2 29 0.00098 26.0 3.0 34 90-123 15-49 (181)
40 3zw5_A Glyoxalase domain-conta 33.9 47 0.0016 22.2 3.8 38 104-141 100-138 (147)
41 1lfd_A Ralgds; RAL, effector i 32.9 47 0.0016 23.6 3.7 37 80-118 7-43 (87)
42 2l48_A N-acetylmuramoyl-L-alan 32.3 62 0.0021 22.9 4.2 39 97-140 24-62 (85)
43 3s1t_A Aspartokinase; ACT doma 31.2 51 0.0017 24.6 3.9 43 77-123 86-131 (181)
44 3ab4_A Aspartokinase; aspartat 30.9 1.2E+02 0.0041 25.2 6.5 36 90-125 263-299 (421)
45 4go7_X Aspartokinase; transfer 30.2 36 0.0012 26.4 3.0 34 90-123 34-68 (200)
46 4esb_A Transcriptional regulat 29.8 98 0.0034 21.3 5.0 39 101-140 41-79 (115)
47 3ey7_A Biphenyl-2,3-DIOL 1,2-d 29.1 69 0.0024 20.1 3.8 37 105-141 84-121 (133)
48 3r6a_A Uncharacterized protein 26.7 1.4E+02 0.0049 20.2 5.3 34 105-141 76-109 (144)
49 3hdp_A Glyoxalase-I; glutathio 26.5 1.3E+02 0.0043 19.1 5.0 37 105-141 88-124 (133)
50 1rax_A Protein (RA-domain of R 25.8 88 0.003 23.2 4.3 38 79-118 31-68 (115)
51 3hhh_A Transcriptional regulat 25.0 1.2E+02 0.0041 20.9 4.8 39 101-140 45-83 (116)
52 2kii_A Putative uncharacterize 23.8 2.2E+02 0.0076 21.0 6.6 64 75-141 112-180 (181)
53 3elk_A Putative transcriptiona 23.8 1.4E+02 0.0048 20.6 4.9 38 102-140 47-84 (117)
54 2dql_A PEX protein; circadian 22.8 1.3E+02 0.0044 20.7 4.5 40 101-140 55-94 (115)
55 2i7r_A Conserved domain protei 22.6 1.5E+02 0.0051 18.5 4.7 35 105-141 74-108 (118)
56 3e5d_A Putative glyoxalase I; 21.6 1.5E+02 0.0052 18.3 4.9 36 104-141 84-119 (127)
57 3g12_A Putative lactoylglutath 21.2 1.8E+02 0.0062 19.0 6.6 43 92-141 68-111 (128)
58 4esf_A PADR-like transcription 21.1 1.2E+02 0.0043 20.8 4.2 39 101-140 43-81 (117)
59 3ghj_A Putative integron gene 20.9 1.2E+02 0.004 20.2 3.9 36 104-141 97-132 (141)
60 3huh_A Virulence protein STM31 20.8 1.1E+02 0.0038 20.1 3.7 37 105-141 97-134 (152)
61 3tfg_A ALR2278 protein; heme-b 20.7 2.5E+02 0.0085 20.9 6.0 62 75-140 114-182 (189)
62 2a4x_A Mitomycin-binding prote 20.5 1.8E+02 0.0062 18.8 5.8 36 104-141 84-119 (138)
63 1rlf_A RLF, RLF-RBD; signal tr 20.2 1.5E+02 0.0051 21.1 4.4 37 80-118 9-46 (90)
64 1xma_A Predicted transcription 20.1 1.8E+02 0.0061 20.9 5.0 39 101-140 75-113 (145)
No 1
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=98.24 E-value=1.7e-06 Score=66.20 Aligned_cols=54 Identities=15% Similarity=0.091 Sum_probs=48.8
Q ss_pred CCCCCceEEEEEeCCcccHHHHHHHHHHhcCceEEEEEEEeCC--CcceEEEEEec
Q 032291 86 DSDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDS--SGKHNKFAITK 139 (143)
Q Consensus 86 dss~~aTIVeV~s~DR~GLLldivqaL~dLgL~I~KA~ISTdG--~~~~DVFyVTD 139 (143)
+.....+++.|...||+|++..|+++|.+.|+||..+...+++ ++..|.||++.
T Consensus 88 ~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~ 143 (195)
T 2nyi_A 88 SPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGS 143 (195)
T ss_dssp CTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEE
T ss_pred CCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEE
Confidence 4445678999999999999999999999999999999999999 77889999864
No 2
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=98.12 E-value=6.1e-06 Score=62.03 Aligned_cols=55 Identities=15% Similarity=0.132 Sum_probs=46.4
Q ss_pred CCCCCCceEEEEEeCCcccHHHHHHHHHHhcCceEEEEEEEeCCC----cceEEEEEec
Q 032291 85 LDSDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSS----GKHNKFAITK 139 (143)
Q Consensus 85 Ndss~~aTIVeV~s~DR~GLLldivqaL~dLgL~I~KA~ISTdG~----~~~DVFyVTD 139 (143)
++.....+++.|...||+|+|.+++++|.+.|+||..++..|+++ +..|.||++.
T Consensus 87 ~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~ 145 (192)
T 1u8s_A 87 HQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAI 145 (192)
T ss_dssp CCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEE
T ss_pred CccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEE
Confidence 355567789999999999999999999999999999999999984 5789999864
No 3
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.62 E-value=0.00019 Score=46.54 Aligned_cols=46 Identities=9% Similarity=0.004 Sum_probs=39.0
Q ss_pred ceEEEEEeCCcccHHHHHHHHHHhcCceEEEEEEEeCCCcceEEEE
Q 032291 91 ATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFA 136 (143)
Q Consensus 91 aTIVeV~s~DR~GLLldivqaL~dLgL~I~KA~ISTdG~~~~DVFy 136 (143)
.+.+.|...||+|+|.+++++|.+.|+||....+...++.+..+|-
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~ 50 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLM 50 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEE
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEE
Confidence 4678899999999999999999999999999999887664444443
No 4
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=97.46 E-value=0.00056 Score=45.01 Aligned_cols=45 Identities=16% Similarity=0.137 Sum_probs=37.9
Q ss_pred ceEEEEEeCCcccHHHHHHHHHHhcCceEEEEEEEeCCCcceEEE
Q 032291 91 ATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKF 135 (143)
Q Consensus 91 aTIVeV~s~DR~GLLldivqaL~dLgL~I~KA~ISTdG~~~~DVF 135 (143)
-..+.|...||+|+|.+++++|.+.|.||......++.+.+.=.+
T Consensus 5 ~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i 49 (91)
T 1zpv_A 5 KAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMA 49 (91)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEE
T ss_pred eEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEE
Confidence 357899999999999999999999999999998888765443333
No 5
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=97.33 E-value=0.0006 Score=51.09 Aligned_cols=49 Identities=12% Similarity=0.152 Sum_probs=43.1
Q ss_pred ceEEEEEeCCcccHHHHHHHHHHhcCceEEEEEEEeCCCcceEEEEEec
Q 032291 91 ATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITK 139 (143)
Q Consensus 91 aTIVeV~s~DR~GLLldivqaL~dLgL~I~KA~ISTdG~~~~DVFyVTD 139 (143)
.-+|.|...||+|++..++++|.+.|+||..+.+.+.++++.-.|.|..
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~ 54 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISG 54 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEec
Confidence 3578999999999999999999999999999999988777766777753
No 6
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=97.11 E-value=0.00081 Score=47.36 Aligned_cols=36 Identities=19% Similarity=0.237 Sum_probs=33.8
Q ss_pred EEEEeCCcccHHHHHHHHHHhcCceEEEEEEEeCCC
Q 032291 94 VEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSS 129 (143)
Q Consensus 94 VeV~s~DR~GLLldivqaL~dLgL~I~KA~ISTdG~ 129 (143)
++|.+.||+|+|.|++++|.+.|.||....+.++|.
T Consensus 3 ~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~g~ 38 (190)
T 2jhe_A 3 LEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGR 38 (190)
T ss_dssp EEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETTTE
T ss_pred EEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecCCE
Confidence 689999999999999999999999999999988854
No 7
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=96.91 E-value=0.0028 Score=48.19 Aligned_cols=48 Identities=23% Similarity=0.216 Sum_probs=41.8
Q ss_pred ceEEEEEeCCcccHHHHHHHHHHhcCceEEEEEEEeCCCcceEEEEEe
Q 032291 91 ATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAIT 138 (143)
Q Consensus 91 aTIVeV~s~DR~GLLldivqaL~dLgL~I~KA~ISTdG~~~~DVFyVT 138 (143)
-.+|-|...||+||...++.+|.++|+||..|.+.+.+++|.=.|.|.
T Consensus 5 ~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m~~~v~ 52 (195)
T 2nyi_A 5 SFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAMIVLVS 52 (195)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEEEEEEE
Confidence 358999999999999999999999999999999997766663377775
No 8
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=94.30 E-value=0.06 Score=44.01 Aligned_cols=41 Identities=12% Similarity=0.195 Sum_probs=37.2
Q ss_pred ceEEEEEeCCcccHHHHHHHHHHhcCceEEEEEEEeCCCcc
Q 032291 91 ATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGK 131 (143)
Q Consensus 91 aTIVeV~s~DR~GLLldivqaL~dLgL~I~KA~ISTdG~~~ 131 (143)
--|+.|...||+|+...+++.|.+.|.||.-..-...+++|
T Consensus 12 ~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f 52 (415)
T 3p96_A 12 SVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRL 52 (415)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEE
T ss_pred eEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEe
Confidence 45899999999999999999999999999998888777765
No 9
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=93.89 E-value=0.11 Score=39.92 Aligned_cols=36 Identities=19% Similarity=0.304 Sum_probs=32.3
Q ss_pred EEEEEeCCcccHHHHHHHHHHhcCceEEEEEEEeCC
Q 032291 93 IVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDS 128 (143)
Q Consensus 93 IVeV~s~DR~GLLldivqaL~dLgL~I~KA~ISTdG 128 (143)
.++|...||+|+|.+++++|++.|.||....+....
T Consensus 5 ~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~ 40 (164)
T 2f1f_A 5 ILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTD 40 (164)
T ss_dssp EEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECS
T ss_pred EEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecC
Confidence 578999999999999999999999999998887533
No 10
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=93.44 E-value=0.11 Score=43.25 Aligned_cols=36 Identities=22% Similarity=0.176 Sum_probs=33.5
Q ss_pred eEEEEEeCCcccHHHHHHHHHHhcCceEEEEEEEeC
Q 032291 92 TIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLD 127 (143)
Q Consensus 92 TIVeV~s~DR~GLLldivqaL~dLgL~I~KA~ISTd 127 (143)
-++.|...||+|+...+++.|.+.|+||....-..|
T Consensus 23 ~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d 58 (302)
T 3o1l_A 23 FRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSD 58 (302)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEec
Confidence 479999999999999999999999999999887765
No 11
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=92.85 E-value=0.19 Score=38.70 Aligned_cols=34 Identities=21% Similarity=0.295 Sum_probs=31.4
Q ss_pred EEEEEeCCcccHHHHHHHHHHhcCceEEEEEEEe
Q 032291 93 IVEITFGDRLGALLDTMNALKNLGLNVVKANVFL 126 (143)
Q Consensus 93 IVeV~s~DR~GLLldivqaL~dLgL~I~KA~IST 126 (143)
.+.|...||+|.|.+++++|++.|.||....+..
T Consensus 6 ~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~ 39 (165)
T 2pc6_A 6 IISLLMENEAGALSRVAGLFSARGYNIESLSVAP 39 (165)
T ss_dssp EEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEE
T ss_pred EEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEe
Confidence 5788999999999999999999999999988864
No 12
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=92.74 E-value=0.096 Score=42.89 Aligned_cols=36 Identities=25% Similarity=0.311 Sum_probs=29.5
Q ss_pred EEEEEeCCcccHHHHHHHHHHhcCceEEEEEEEeCC
Q 032291 93 IVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDS 128 (143)
Q Consensus 93 IVeV~s~DR~GLLldivqaL~dLgL~I~KA~ISTdG 128 (143)
-++|...||+|+|.+++++|.+.+.||......++.
T Consensus 6 tL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~ 41 (223)
T 1y7p_A 6 GLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIK 41 (223)
T ss_dssp EEEEEEECCTTHHHHHHHHCC----CEEEEEEEECC
T ss_pred EEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccc
Confidence 478999999999999999999999999999999865
No 13
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=92.73 E-value=0.17 Score=41.56 Aligned_cols=36 Identities=19% Similarity=0.087 Sum_probs=33.1
Q ss_pred eEEEEEeCCcccHHHHHHHHHHhcCceEEEEEEEeC
Q 032291 92 TIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLD 127 (143)
Q Consensus 92 TIVeV~s~DR~GLLldivqaL~dLgL~I~KA~ISTd 127 (143)
-++.|...||+|+...+++.|.+.|+||....-.+|
T Consensus 9 ~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d 44 (286)
T 3n0v_A 9 WILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDD 44 (286)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred EEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeecc
Confidence 579999999999999999999999999999887754
No 14
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=92.62 E-value=0.33 Score=34.37 Aligned_cols=34 Identities=24% Similarity=0.288 Sum_probs=30.6
Q ss_pred eEEEEEeCCcccHHHHHHHHHHhcCceEEEEEEE
Q 032291 92 TIVEITFGDRLGALLDTMNALKNLGLNVVKANVF 125 (143)
Q Consensus 92 TIVeV~s~DR~GLLldivqaL~dLgL~I~KA~IS 125 (143)
.++-|.-.|+||.|..+.++|.+.|+||...+..
T Consensus 73 svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~ 106 (144)
T 2f06_A 73 DVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSF 106 (144)
T ss_dssp EEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEE
T ss_pred eEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEE
Confidence 5788888999999999999999999999876665
No 15
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=92.62 E-value=0.17 Score=41.78 Aligned_cols=37 Identities=16% Similarity=0.196 Sum_probs=33.5
Q ss_pred ceEEEEEeCCcccHHHHHHHHHHhcCceEEEEEEEeC
Q 032291 91 ATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLD 127 (143)
Q Consensus 91 aTIVeV~s~DR~GLLldivqaL~dLgL~I~KA~ISTd 127 (143)
--++.|...||+|+...+++.|.+.|+||....-.+|
T Consensus 10 ~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d 46 (292)
T 3lou_A 10 QFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDD 46 (292)
T ss_dssp EEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEec
Confidence 3589999999999999999999999999999887753
No 16
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=92.45 E-value=0.43 Score=33.72 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=30.3
Q ss_pred eEEEEEeCCcccHHHHHHHHHHhcCceEEEEEEEe
Q 032291 92 TIVEITFGDRLGALLDTMNALKNLGLNVVKANVFL 126 (143)
Q Consensus 92 TIVeV~s~DR~GLLldivqaL~dLgL~I~KA~IST 126 (143)
--+.|.-.||+|.|.++.+.|.+.|+||..-.+..
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~ 41 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAE 41 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEe
Confidence 34667888999999999999999999999877653
No 17
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=92.43 E-value=0.25 Score=40.54 Aligned_cols=36 Identities=25% Similarity=0.331 Sum_probs=32.9
Q ss_pred ceEEEEEeCCcccHHHHHHHHHHhcCceEEEEEEEe
Q 032291 91 ATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFL 126 (143)
Q Consensus 91 aTIVeV~s~DR~GLLldivqaL~dLgL~I~KA~IST 126 (143)
--++.|...||+|+...+++.|.+.|+||....-.+
T Consensus 7 ~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~ 42 (287)
T 3nrb_A 7 QYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFN 42 (287)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeee
Confidence 358999999999999999999999999999888764
No 18
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=92.16 E-value=0.33 Score=39.89 Aligned_cols=36 Identities=22% Similarity=0.337 Sum_probs=32.7
Q ss_pred eEEEEEeCCcccHHHHHHHHHHhcCceEEEEEEEeC
Q 032291 92 TIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLD 127 (143)
Q Consensus 92 TIVeV~s~DR~GLLldivqaL~dLgL~I~KA~ISTd 127 (143)
-++.|...||+|+...+++.|.+.|+||....-.+|
T Consensus 7 ~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d 42 (288)
T 3obi_A 7 YVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYND 42 (288)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeec
Confidence 589999999999999999999999999998877543
No 19
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=88.44 E-value=1.3 Score=37.69 Aligned_cols=61 Identities=15% Similarity=0.191 Sum_probs=46.2
Q ss_pred CccCCCEEEEcCCCCCCceEEEEEeCCcccHHHHHHHHHHhcCceEEEEEEEeCCCcceEEEEE
Q 032291 74 DTIPTPKVIIDLDSDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAI 137 (143)
Q Consensus 74 ~~~~~PrV~IDNdss~~aTIVeV~s~DR~GLLldivqaL~dLgL~I~KA~ISTdG~~~~DVFyV 137 (143)
..+|.|.|.+... ...+++ +.-.|+||.+-.+.++|.+.|+||..-++.+.|+...-++-|
T Consensus 317 ~~vn~p~~~~~~~--~~~rl~-~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidv 377 (404)
T 1sc6_A 317 SAVNFPEVSLPLH--GGRRLM-HIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 377 (404)
T ss_dssp TBSSSCCCCCCCC--SSEEEE-EEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEE
T ss_pred ceecccccccCcC--CcceEE-EEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEc
Confidence 4566666554422 234444 777899999999999999999999999999988876555543
No 20
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=85.88 E-value=2.7 Score=33.38 Aligned_cols=34 Identities=18% Similarity=0.300 Sum_probs=31.0
Q ss_pred eEEEEEeCCcccHHHHHHHHHHhcCceEEEEEEE
Q 032291 92 TIVEITFGDRLGALLDTMNALKNLGLNVVKANVF 125 (143)
Q Consensus 92 TIVeV~s~DR~GLLldivqaL~dLgL~I~KA~IS 125 (143)
-.+.|...||+|.|..++.+|.+-|+||..=.+.
T Consensus 30 ~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~ 63 (193)
T 2fgc_A 30 HLVSMLVHNKPGVMRKVANLFARRGFNISSITVG 63 (193)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEE
T ss_pred EEEEEEECCCChHHHHHHHHHHHCCceEEEEEee
Confidence 4688899999999999999999999999987775
No 21
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=83.95 E-value=1 Score=37.13 Aligned_cols=48 Identities=13% Similarity=0.190 Sum_probs=35.5
Q ss_pred CceEEEEEeCCcccHHHHHHHHHHhcCceEEEEEEEe-CCCcceEEEEE
Q 032291 90 DATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFL-DSSGKHNKFAI 137 (143)
Q Consensus 90 ~aTIVeV~s~DR~GLLldivqaL~dLgL~I~KA~IST-dG~~~~DVFyV 137 (143)
+-|-+-+.-.|++|.|+++.+.|++.|+|+.|=.=-- .+.-..=.|||
T Consensus 199 ~ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~Ffv 247 (283)
T 2qmx_A 199 QKTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYA 247 (283)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEE
T ss_pred ceEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEE
Confidence 3466666667999999999999999999998743222 23334667877
No 22
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=83.86 E-value=1.2 Score=36.52 Aligned_cols=49 Identities=16% Similarity=0.194 Sum_probs=35.9
Q ss_pred CCceEEEEEe---CCcccHHHHHHHHHHhcCceEEEEEEEe-CCCcceEEEEE
Q 032291 89 PDATIVEITF---GDRLGALLDTMNALKNLGLNVVKANVFL-DSSGKHNKFAI 137 (143)
Q Consensus 89 ~~aTIVeV~s---~DR~GLLldivqaL~dLgL~I~KA~IST-dG~~~~DVFyV 137 (143)
.+-|-+-+.- .|++|.|+++.+.|.+.|+|+.|=.=-- .+.-..=.|||
T Consensus 184 ~~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~Ffi 236 (267)
T 2qmw_A 184 QNATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFV 236 (267)
T ss_dssp SSCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEE
T ss_pred CCeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEE
Confidence 3456666776 8999999999999999999998743222 23334567777
No 23
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=83.42 E-value=3.6 Score=35.51 Aligned_cols=56 Identities=20% Similarity=0.229 Sum_probs=46.5
Q ss_pred CccCCCEEEEcCCCCCCceEEEEEeCCcccHHHHHHHHHHhcCceEEEEEEEeCCCcc
Q 032291 74 DTIPTPKVIIDLDSDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGK 131 (143)
Q Consensus 74 ~~~~~PrV~IDNdss~~aTIVeV~s~DR~GLLldivqaL~dLgL~I~KA~ISTdG~~~ 131 (143)
..+|.|.|.... .+...=+-+.-.|+||.|-.|.++|.+.|+||..=+-.|.|+..
T Consensus 328 ~~Vn~p~~~~~~--~~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~ 383 (416)
T 3k5p_A 328 GAVNFPQVQLPP--RPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVG 383 (416)
T ss_dssp TBSSSCCCCCCC--CSSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCE
T ss_pred ceeeCCCcCCCC--CCCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceE
Confidence 467777776543 34566777888999999999999999999999999999999974
No 24
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=80.87 E-value=1.7 Score=36.42 Aligned_cols=48 Identities=25% Similarity=0.369 Sum_probs=34.8
Q ss_pred CceEEEEEeC-CcccHHHHHHHHHHhcCceEEEEEEEe-CCCcceEEEEE
Q 032291 90 DATIVEITFG-DRLGALLDTMNALKNLGLNVVKANVFL-DSSGKHNKFAI 137 (143)
Q Consensus 90 ~aTIVeV~s~-DR~GLLldivqaL~dLgL~I~KA~IST-dG~~~~DVFyV 137 (143)
+-|-+-+.-. |++|.|+++.+.|++.|+|+.|=.=-- .+.-..=.|||
T Consensus 200 ~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~Ffi 249 (313)
T 3mwb_A 200 DKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSI 249 (313)
T ss_dssp EEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEE
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEE
Confidence 4577777774 999999999999999999998643221 23333557777
No 25
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=77.06 E-value=2.1 Score=31.36 Aligned_cols=35 Identities=11% Similarity=0.167 Sum_probs=29.9
Q ss_pred CceEEEEEe-CCcccHHHHHHHHHHhcCceEEEEEE
Q 032291 90 DATIVEITF-GDRLGALLDTMNALKNLGLNVVKANV 124 (143)
Q Consensus 90 ~aTIVeV~s-~DR~GLLldivqaL~dLgL~I~KA~I 124 (143)
+.+.|.|.. .|++|.+.++.++|.+.|++|.--..
T Consensus 24 ~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~ 59 (167)
T 2re1_A 24 NQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQ 59 (167)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEE
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEc
Confidence 457788884 89999999999999999999986544
No 26
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=77.05 E-value=2.3 Score=35.85 Aligned_cols=39 Identities=15% Similarity=0.218 Sum_probs=28.7
Q ss_pred CCcccHHHHHHHHHHhcCceEEEEEEEe-CCCcceEEEEE
Q 032291 99 GDRLGALLDTMNALKNLGLNVVKANVFL-DSSGKHNKFAI 137 (143)
Q Consensus 99 ~DR~GLLldivqaL~dLgL~I~KA~IST-dG~~~~DVFyV 137 (143)
.|++|.|+++.+.|++.|+|..|=.=-- .+.-..=.|||
T Consensus 216 ~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~Ffi 255 (329)
T 3luy_A 216 VTGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIV 255 (329)
T ss_dssp CCSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEE
Confidence 3899999999999999999998643221 23333556776
No 27
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=69.88 E-value=2.8 Score=30.55 Aligned_cols=35 Identities=20% Similarity=0.168 Sum_probs=28.7
Q ss_pred CCceEEEEEe-CCcccHHHHHHHHHHhcCceEEEEE
Q 032291 89 PDATIVEITF-GDRLGALLDTMNALKNLGLNVVKAN 123 (143)
Q Consensus 89 ~~aTIVeV~s-~DR~GLLldivqaL~dLgL~I~KA~ 123 (143)
++.+.|.|.. .|++|.+..+.++|.+.|++|.--.
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~ 49 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMII 49 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEE
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEE
Confidence 3556666665 7899999999999999999998743
No 28
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=69.63 E-value=3.3 Score=30.73 Aligned_cols=37 Identities=16% Similarity=0.190 Sum_probs=30.3
Q ss_pred CCceEEEE-EeCCcccHHHHHHHHHHhcCceEEEEEEE
Q 032291 89 PDATIVEI-TFGDRLGALLDTMNALKNLGLNVVKANVF 125 (143)
Q Consensus 89 ~~aTIVeV-~s~DR~GLLldivqaL~dLgL~I~KA~IS 125 (143)
++.+.|.| ...|++|.+.++.+.|.+.|++|.--..+
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s 50 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQN 50 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEEC
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcC
Confidence 35677777 35899999999999999999998866554
No 29
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=67.12 E-value=2.7 Score=37.14 Aligned_cols=54 Identities=13% Similarity=0.193 Sum_probs=38.0
Q ss_pred cCCCCCCceEEEEEeCCcccHHHHHHHHHHhcCceEEEEEEE-eCCCcceEEEEE
Q 032291 84 DLDSDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANVF-LDSSGKHNKFAI 137 (143)
Q Consensus 84 DNdss~~aTIVeV~s~DR~GLLldivqaL~dLgL~I~KA~IS-TdG~~~~DVFyV 137 (143)
++.+..+-|-+-+.-.|++|.|+++.+.|++.|+|+.|=.=- +.+.-..=.|||
T Consensus 27 e~~tg~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfV 81 (429)
T 1phz_A 27 DNSNQNGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFT 81 (429)
T ss_dssp CCCCSSCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEE
T ss_pred CCCCCCCeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEE
Confidence 344445667777777899999999999999999998753321 123333556776
No 30
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=65.48 E-value=5.9 Score=28.93 Aligned_cols=39 Identities=15% Similarity=0.124 Sum_probs=33.5
Q ss_pred CEEEEcCCCCCCceEEEEEeCC---cccHHHHHHHHHHhcCceEEE
Q 032291 79 PKVIIDLDSDPDATIVEITFGD---RLGALLDTMNALKNLGLNVVK 121 (143)
Q Consensus 79 PrV~IDNdss~~aTIVeV~s~D---R~GLLldivqaL~dLgL~I~K 121 (143)
..|.++ ++.++|.|...+ ++|.+..+.++|.+.|++|.-
T Consensus 95 ~~i~~~----~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~ 136 (167)
T 2re1_A 95 ASIDGD----DTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQM 136 (167)
T ss_dssp SEEEEE----SSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCE
T ss_pred ceEEec----CCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEE
Confidence 456654 468899999887 999999999999999999987
No 31
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=63.22 E-value=26 Score=28.36 Aligned_cols=48 Identities=10% Similarity=0.012 Sum_probs=36.9
Q ss_pred CceEEEEEeCC-cccHHHHHHHHHHhcCceEEEEEEEeCCCcceEEEEE
Q 032291 90 DATIVEITFGD-RLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAI 137 (143)
Q Consensus 90 ~aTIVeV~s~D-R~GLLldivqaL~dLgL~I~KA~ISTdG~~~~DVFyV 137 (143)
.--++.+.+.+ ++|++.++.++|.+.|+||....--++...+.=-|+|
T Consensus 100 ~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~~~~~~~~~v 148 (415)
T 3p96_A 100 STHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYPVIGLELRV 148 (415)
T ss_dssp CSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEESSSSEEEEEEE
T ss_pred CcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccCCCceEEEEEe
Confidence 44567888888 9999999999999999999888777754433222555
No 32
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=57.52 E-value=24 Score=30.50 Aligned_cols=41 Identities=27% Similarity=0.258 Sum_probs=36.3
Q ss_pred CCCCceEEEEEeCCcccHHHHHHHHHHhcCceEEEEEEEeC
Q 032291 87 SDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLD 127 (143)
Q Consensus 87 ss~~aTIVeV~s~DR~GLLldivqaL~dLgL~I~KA~ISTd 127 (143)
..+....+-|.-.||||.+-.+...|.+.|+||..-.|.-.
T Consensus 450 ~~~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~ 490 (529)
T 1ygy_A 450 LRAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSED 490 (529)
T ss_dssp EESCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEC
T ss_pred ecCCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecC
Confidence 45567778889999999999999999999999999999864
No 33
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=55.04 E-value=11 Score=32.60 Aligned_cols=47 Identities=15% Similarity=0.128 Sum_probs=31.9
Q ss_pred EEEEEeCCcccHHHHHHHHHHhcCceEEEEEEEeC--CCcceEEEEEec
Q 032291 93 IVEITFGDRLGALLDTMNALKNLGLNVVKANVFLD--SSGKHNKFAITK 139 (143)
Q Consensus 93 IVeV~s~DR~GLLldivqaL~dLgL~I~KA~ISTd--G~~~~DVFyVTD 139 (143)
-+.+...||+|.|.+|+++|.+.|++|..-.=.-. ++.......||.
T Consensus 361 y~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~~~~v~~th 409 (444)
T 3mtj_A 361 YLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTH 409 (444)
T ss_dssp EEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEEC
T ss_pred EEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCCceEEEEec
Confidence 46777899999999999999999999976432111 122356666764
No 34
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=52.01 E-value=14 Score=26.72 Aligned_cols=38 Identities=21% Similarity=0.220 Sum_probs=31.8
Q ss_pred EEEEcCCCCCCceEEEEEeCC---cccHHHHHHHHHHhcCceEEE
Q 032291 80 KVIIDLDSDPDATIVEITFGD---RLGALLDTMNALKNLGLNVVK 121 (143)
Q Consensus 80 rV~IDNdss~~aTIVeV~s~D---R~GLLldivqaL~dLgL~I~K 121 (143)
.|.++ ++..+|.|-..+ ++|.+..+.++|.+-|+||.-
T Consensus 88 ~v~~~----~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~ 128 (167)
T 2dt9_A 88 EAILR----PDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEM 128 (167)
T ss_dssp EEEEE----CSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCE
T ss_pred cEEEe----CCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEE
Confidence 45554 577888888877 999999999999999999943
No 35
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=50.85 E-value=11 Score=27.77 Aligned_cols=39 Identities=21% Similarity=0.316 Sum_probs=32.3
Q ss_pred CEEEEcCCCCCCceEEEEEeC---CcccHHHHHHHHHHhcCceEEE
Q 032291 79 PKVIIDLDSDPDATIVEITFG---DRLGALLDTMNALKNLGLNVVK 121 (143)
Q Consensus 79 PrV~IDNdss~~aTIVeV~s~---DR~GLLldivqaL~dLgL~I~K 121 (143)
..|.++ ++..+|.|... +++|.+..+.++|.+.|+||.-
T Consensus 87 ~~v~~~----~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~ 128 (178)
T 2dtj_A 87 TNVLYD----DQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIEL 128 (178)
T ss_dssp SEEEEE----SCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCE
T ss_pred CeEEEe----CCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEE
Confidence 456664 46677888776 8999999999999999999987
No 36
>1wj5_A Hypothetical protein (riken cDNA 0610009H20); winged helix, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.4.5.59
Probab=46.60 E-value=7.8 Score=29.22 Aligned_cols=34 Identities=18% Similarity=0.300 Sum_probs=26.5
Q ss_pred ccHHHHHHHHHHhcCceEEEEEEEeCCCcceEEEEEeccc
Q 032291 102 LGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKAY 141 (143)
Q Consensus 102 ~GLLldivqaL~dLgL~I~KA~ISTdG~~~~DVFyVTD~d 141 (143)
+-++-+.++.|.+.|+.-+| .+..-++|||||+|
T Consensus 77 ~sifKeAi~~Lqe~G~VfqK------~~~~d~lYyVT~qD 110 (120)
T 1wj5_A 77 QRVFKNALQLLQEKGLVFQR------DSGSDKLYYVTTKD 110 (120)
T ss_dssp HHHHHHHHHHHHHHTSEECS------SCSSSCCBEECSSS
T ss_pred HHHHHHHHHHHHHCCEEEec------cCCccceEEeeccc
Confidence 45666999999999997765 34445799999987
No 37
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=43.55 E-value=63 Score=20.77 Aligned_cols=39 Identities=10% Similarity=0.086 Sum_probs=30.6
Q ss_pred cHHHHHHHHHHhcCceEEEEEEEe-CC-CcceEEEEEeccc
Q 032291 103 GALLDTMNALKNLGLNVVKANVFL-DS-SGKHNKFAITKAY 141 (143)
Q Consensus 103 GLLldivqaL~dLgL~I~KA~IST-dG-~~~~DVFyVTD~d 141 (143)
.-|-++.+.|++.|+.+...-... .| .+..-.||+.|.+
T Consensus 79 ~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPd 119 (135)
T 3rri_A 79 KHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPS 119 (135)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTT
T ss_pred HhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCC
Confidence 568899999999999998776664 33 3556689999976
No 38
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=37.08 E-value=71 Score=20.68 Aligned_cols=35 Identities=3% Similarity=-0.015 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhcCceEEEEEEEeCCCcceEEEEEeccc
Q 032291 104 ALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKAY 141 (143)
Q Consensus 104 LLldivqaL~dLgL~I~KA~ISTdG~~~~DVFyVTD~d 141 (143)
-|-++.+.|++.|..+...-....++ ..||+.|.+
T Consensus 108 d~~~~~~~l~~~G~~~~~~~~~~~~g---~~~~~~DPd 142 (156)
T 3kol_A 108 LFDRAVTVIGENKIAIAHGPVTRPTG---RGVYFYDPD 142 (156)
T ss_dssp GHHHHHHHHHHTTCCEEEEEEEC-CC---EEEEEECTT
T ss_pred HHHHHHHHHHHCCCccccCceecCCc---cEEEEECCC
Confidence 47888899999999998766554333 288999876
No 39
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=34.19 E-value=29 Score=25.96 Aligned_cols=34 Identities=18% Similarity=0.174 Sum_probs=26.6
Q ss_pred CceEEEEE-eCCcccHHHHHHHHHHhcCceEEEEE
Q 032291 90 DATIVEIT-FGDRLGALLDTMNALKNLGLNVVKAN 123 (143)
Q Consensus 90 ~aTIVeV~-s~DR~GLLldivqaL~dLgL~I~KA~ 123 (143)
+.+.|.|. -.|++|.+..+.++|.+.|++|.--.
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~ 49 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVL 49 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEE
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEE
Confidence 34455543 46999999999999999999997543
No 40
>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}
Probab=33.90 E-value=47 Score=22.23 Aligned_cols=38 Identities=13% Similarity=0.113 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhcCceEEEEEEEeCCC-cceEEEEEeccc
Q 032291 104 ALLDTMNALKNLGLNVVKANVFLDSS-GKHNKFAITKAY 141 (143)
Q Consensus 104 LLldivqaL~dLgL~I~KA~ISTdG~-~~~DVFyVTD~d 141 (143)
-|-++.+.|++.|+.+...-+...|. ...-.||+.|.+
T Consensus 100 dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPd 138 (147)
T 3zw5_A 100 PLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPD 138 (147)
T ss_dssp CHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTT
T ss_pred CHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCC
Confidence 47788899999999998766654443 446689999986
No 41
>1lfd_A Ralgds; RAL, effector interaction; HET: GNP; 2.10A {Rattus norvegicus} SCOP: d.15.1.5 PDB: 2b3a_A
Probab=32.91 E-value=47 Score=23.59 Aligned_cols=37 Identities=19% Similarity=0.275 Sum_probs=32.0
Q ss_pred EEEEcCCCCCCceEEEEEeCCcccHHHHHHHHHHhcCce
Q 032291 80 KVIIDLDSDPDATIVEITFGDRLGALLDTMNALKNLGLN 118 (143)
Q Consensus 80 rV~IDNdss~~aTIVeV~s~DR~GLLldivqaL~dLgL~ 118 (143)
||.+|++....|--|.|++.||---+ |.++|.++||.
T Consensus 7 RVs~d~~~gn~YKSI~ltsqDrtp~v--I~~al~Khnl~ 43 (87)
T 1lfd_A 7 RVSLDVDNGNMYKSILVTSQDKAPTV--IRKAMDKHNLD 43 (87)
T ss_dssp EEEESSCSSEEEEEEEEETTCBHHHH--HHHHHHHTTCC
T ss_pred EEEEecCCCcEEEEEEEecCCCcHHH--HHHHHHHcCCC
Confidence 79999999889999999999997655 56889999886
No 42
>2l48_A N-acetylmuramoyl-L-alanine amidase; bacillus anthracis gamma- phage endolysin, PLYG, cell WALL B domain, homodimer, ACT-type domain; NMR {Bacillus phage gamma}
Probab=32.34 E-value=62 Score=22.87 Aligned_cols=39 Identities=28% Similarity=0.296 Sum_probs=29.4
Q ss_pred EeCCcccHHHHHHHHHHhcCceEEEEEEEeCCCcceEEEEEecc
Q 032291 97 TFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKA 140 (143)
Q Consensus 97 ~s~DR~GLLldivqaL~dLgL~I~KA~ISTdG~~~~DVFyVTD~ 140 (143)
+.+=-+.++-|++++|.++|. +|+|-++++.. .|++||.
T Consensus 24 TGgfg~~~v~ev~~am~~~g~---~gkii~~~dGl--~y~~T~~ 62 (85)
T 2l48_A 24 SGAFSPYETPDVMGALTSLKM---TADFILQSDGL--TYFISKP 62 (85)
T ss_dssp ECCBCTTTHHHHHHHHHHTTC---CEEEEECTTSC--EEEEECC
T ss_pred ecccCHHHHHHHHHHHHHcCc---eEEEEECCCce--EEEEeCC
Confidence 344456789999999999998 78888888743 4557763
No 43
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=31.20 E-value=51 Score=24.56 Aligned_cols=43 Identities=16% Similarity=0.156 Sum_probs=34.0
Q ss_pred CCCEEEEcCCCCCCceEEEEEeC---CcccHHHHHHHHHHhcCceEEEEE
Q 032291 77 PTPKVIIDLDSDPDATIVEITFG---DRLGALLDTMNALKNLGLNVVKAN 123 (143)
Q Consensus 77 ~~PrV~IDNdss~~aTIVeV~s~---DR~GLLldivqaL~dLgL~I~KA~ 123 (143)
+.-.|.+++ +..+|.|-.. +++|.+..+.++|.+-|++|.--.
T Consensus 86 ~~~~v~~~~----~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 86 GFSQLLYDD----HIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 131 (181)
T ss_dssp CCSEEEEES----CEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred CcceEEEeC----CEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE
Confidence 334566653 5677777655 899999999999999999998766
No 44
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=30.94 E-value=1.2e+02 Score=25.25 Aligned_cols=36 Identities=17% Similarity=0.199 Sum_probs=29.8
Q ss_pred CceEEEEE-eCCcccHHHHHHHHHHhcCceEEEEEEE
Q 032291 90 DATIVEIT-FGDRLGALLDTMNALKNLGLNVVKANVF 125 (143)
Q Consensus 90 ~aTIVeV~-s~DR~GLLldivqaL~dLgL~I~KA~IS 125 (143)
+.+.|.|. -.|++|.+.++.+.|.+.|++|.--..+
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~ 299 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQN 299 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEEC
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEcc
Confidence 45677777 5899999999999999999999865443
No 45
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=30.18 E-value=36 Score=26.38 Aligned_cols=34 Identities=18% Similarity=0.174 Sum_probs=26.9
Q ss_pred CceEEEEE-eCCcccHHHHHHHHHHhcCceEEEEE
Q 032291 90 DATIVEIT-FGDRLGALLDTMNALKNLGLNVVKAN 123 (143)
Q Consensus 90 ~aTIVeV~-s~DR~GLLldivqaL~dLgL~I~KA~ 123 (143)
+.+.|.|. -.|++|.+..+-++|.+.|++|.-=.
T Consensus 34 ~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~ 68 (200)
T 4go7_X 34 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVL 68 (200)
T ss_dssp SEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEE
T ss_pred CEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEe
Confidence 34455554 47999999999999999999998643
No 46
>4esb_A Transcriptional regulator, PADR family; DNA binding protein, HTH fold; 2.50A {Bacillus cereus}
Probab=29.79 E-value=98 Score=21.28 Aligned_cols=39 Identities=13% Similarity=0.069 Sum_probs=28.1
Q ss_pred cccHHHHHHHHHHhcCceEEEEEEEeCCCcceEEEEEecc
Q 032291 101 RLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKA 140 (143)
Q Consensus 101 R~GLLldivqaL~dLgL~I~KA~ISTdG~~~~DVFyVTD~ 140 (143)
.+|.||-+.+-|.+-||....-. ..+++.-.-.|.+|+.
T Consensus 41 s~gtlY~~L~rLe~~GlI~~~~~-~~~~g~~rk~Y~LT~~ 79 (115)
T 4esb_A 41 SEGSIYPLLLRMQKEKLIEGTLK-ASSLGPKRKYYHITDK 79 (115)
T ss_dssp CHHHHHHHHHHHHHTTSEEEEEE-ECTTSCEEEEEEECHH
T ss_pred CcChHHHHHHHHHHCCCeEEEee-ecCCCCCcEEEEECHH
Confidence 47999999999999999655433 3344445556778874
No 47
>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*
Probab=29.07 E-value=69 Score=20.12 Aligned_cols=37 Identities=19% Similarity=0.336 Sum_probs=28.0
Q ss_pred HHHHHHHHHhcCceEEEEEEEeCCC-cceEEEEEeccc
Q 032291 105 LLDTMNALKNLGLNVVKANVFLDSS-GKHNKFAITKAY 141 (143)
Q Consensus 105 LldivqaL~dLgL~I~KA~ISTdG~-~~~DVFyVTD~d 141 (143)
|-++.+.|++.|..+...-....+. ...-.||+.|.+
T Consensus 84 ~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPd 121 (133)
T 3ey7_A 84 LSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPD 121 (133)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTT
T ss_pred HHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCC
Confidence 7888899999999998765544333 445688999876
No 48
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=26.67 E-value=1.4e+02 Score=20.24 Aligned_cols=34 Identities=9% Similarity=0.167 Sum_probs=26.1
Q ss_pred HHHHHHHHHhcCceEEEEEEEeCCCcceEEEEEeccc
Q 032291 105 LLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKAY 141 (143)
Q Consensus 105 LldivqaL~dLgL~I~KA~ISTdG~~~~DVFyVTD~d 141 (143)
+-++.+.|++.|..+...-.....+ -.||+.|.+
T Consensus 76 ~d~~~~~l~~~G~~v~~~p~~~~~G---~~~~~~DPd 109 (144)
T 3r6a_A 76 LDKFKTFLEENGAEIIRGPSKVPTG---RNMTVRHSD 109 (144)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEETTE---EEEEEECTT
T ss_pred HHHHHHHHHHcCCEEecCCccCCCc---eEEEEECCC
Confidence 6778899999999988776554433 468999876
No 49
>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A
Probab=26.55 E-value=1.3e+02 Score=19.13 Aligned_cols=37 Identities=5% Similarity=0.142 Sum_probs=26.6
Q ss_pred HHHHHHHHHhcCceEEEEEEEeCCCcceEEEEEeccc
Q 032291 105 LLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKAY 141 (143)
Q Consensus 105 LldivqaL~dLgL~I~KA~ISTdG~~~~DVFyVTD~d 141 (143)
+-++.+.|++.|+.+...-....+.|-.-.+|+.|.+
T Consensus 88 i~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPd 124 (133)
T 3hdp_A 88 IQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTD 124 (133)
T ss_dssp HHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETT
T ss_pred HHHHHHHHHHcCCccccCCeecccCCCceEEEEECCC
Confidence 6778899999999987753333344445678898876
No 50
>1rax_A Protein (RA-domain of RAL guanosine dissociation stimulator); RAS-binding domain, ralgef, ralgds, RAS; NMR {Homo sapiens} SCOP: d.15.1.5
Probab=25.81 E-value=88 Score=23.23 Aligned_cols=38 Identities=21% Similarity=0.249 Sum_probs=32.6
Q ss_pred CEEEEcCCCCCCceEEEEEeCCcccHHHHHHHHHHhcCce
Q 032291 79 PKVIIDLDSDPDATIVEITFGDRLGALLDTMNALKNLGLN 118 (143)
Q Consensus 79 PrV~IDNdss~~aTIVeV~s~DR~GLLldivqaL~dLgL~ 118 (143)
-||.+|++....|--|.|.+.||---+ |.++|.++||.
T Consensus 31 IRVs~d~~~gn~YKSIlltsqDktp~V--I~raL~Khnl~ 68 (115)
T 1rax_A 31 IRVSLDVDNGNMYKSILVTSQDKAPAV--IRKAMDKHNLE 68 (115)
T ss_dssp EEEEESSSSCCCCEEEEEETTCCHHHH--HHHHHHHHTCT
T ss_pred EEEEEecCCCcEEEEEEEecCCCcHHH--HHHHHHHcCCC
Confidence 489999999999999999999997655 56888888875
No 51
>3hhh_A Transcriptional regulator, PADR family; PF03551, structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.70A {Enterococcus faecalis} SCOP: a.4.5.0
Probab=25.00 E-value=1.2e+02 Score=20.94 Aligned_cols=39 Identities=8% Similarity=0.089 Sum_probs=27.1
Q ss_pred cccHHHHHHHHHHhcCceEEEEEEEeCCCcceEEEEEecc
Q 032291 101 RLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKA 140 (143)
Q Consensus 101 R~GLLldivqaL~dLgL~I~KA~ISTdG~~~~DVFyVTD~ 140 (143)
.+|.||-+.+-|.+-||....-. .++++.-.-.|.||+.
T Consensus 45 s~gtlY~~L~rLe~~GlI~~~~~-~~~~g~~rk~Y~lT~~ 83 (116)
T 3hhh_A 45 VEGTVYTILLRLEKNQWVIAEKK-PSEKGPMRKFYRLTSS 83 (116)
T ss_dssp CHHHHHHHHHHHHHTTSEEEEEE-ECC--CEEEEEEECHH
T ss_pred CccHHHHHHHHHHHCCCEEEEee-ecCCCCCceEEEECHH
Confidence 47999999999999999655433 3344444556778874
No 52
>2kii_A Putative uncharacterized protein; H-NOX, unknown function; HET: HEM; NMR {Shewanella oneidensis} PDB: 2kil_A*
Probab=23.83 E-value=2.2e+02 Score=20.99 Aligned_cols=64 Identities=13% Similarity=0.166 Sum_probs=41.2
Q ss_pred ccCCCEEEEcCCCCCCceEEEEEeCCcc-----cHHHHHHHHHHhcCceEEEEEEEeCCCcceEEEEEeccc
Q 032291 75 TIPTPKVIIDLDSDPDATIVEITFGDRL-----GALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKAY 141 (143)
Q Consensus 75 ~~~~PrV~IDNdss~~aTIVeV~s~DR~-----GLLldivqaL~dLgL~I~KA~ISTdG~~~~DVFyVTD~d 141 (143)
.+.+|...+...++. .-++.-.+..+. |+|..+++-+ +..+.|.......+| .-..+|.|+-.+
T Consensus 112 ~~~~Psf~~~~~~~~-~l~l~Y~S~R~l~~~~~Gli~~~A~~f-~~~v~i~~~~~~~~~-~~h~~f~i~~~~ 180 (181)
T 2kii_A 112 EPSLPHINGQLLPNN-QIALRYSSPRRLCFCAEGLLFGAAQHF-QQKIQISHDTCMHTG-ADHCMLIIELQN 180 (181)
T ss_dssp CSCCCEEEEEECSSS-EEEEEEECTTCCHHHHHHHHHHHHHHT-TCCEEEEEEECGGGT-CSSEEEEEEECC
T ss_pred CCCCCeeEEEECCCC-EEEEEEecCCChHHHHHHHHHHHHHHh-CCCeEEEEEeeccCC-CCEEEEEEEecC
Confidence 368898988776543 333445554443 6777777777 677777655554454 458899998654
No 53
>3elk_A Putative transcriptional regulator TA0346; structural genomics, PSI-2, prote structure initiative; 1.70A {Thermoplasma acidophilum}
Probab=23.80 E-value=1.4e+02 Score=20.57 Aligned_cols=38 Identities=18% Similarity=0.344 Sum_probs=27.1
Q ss_pred ccHHHHHHHHHHhcCceEEEEEEEeCCCcceEEEEEecc
Q 032291 102 LGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKA 140 (143)
Q Consensus 102 ~GLLldivqaL~dLgL~I~KA~ISTdG~~~~DVFyVTD~ 140 (143)
+|.||-+.+.|.+-||....-.. .+++.---.|.+|+.
T Consensus 47 ~gtly~~L~~Le~~GlI~~~~~~-~~~~~~rk~Y~lT~~ 84 (117)
T 3elk_A 47 QGSIYILLKTMKERGFVISESSV-NEKGQQLTVYHITDA 84 (117)
T ss_dssp TTHHHHHHHHHHHHTSEEEEEEE-C-CCCEEEEEEECHH
T ss_pred cchHHHHHHHHHHCCCEEEEeee-cCCCCCceEEEECHH
Confidence 59999999999999996655432 344445556778864
No 54
>2dql_A PEX protein; circadian clock associated protein, circadian clock protein; 1.70A {Anabaena SP}
Probab=22.81 E-value=1.3e+02 Score=20.66 Aligned_cols=40 Identities=5% Similarity=-0.025 Sum_probs=28.4
Q ss_pred cccHHHHHHHHHHhcCceEEEEEEEeCCCcceEEEEEecc
Q 032291 101 RLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKA 140 (143)
Q Consensus 101 R~GLLldivqaL~dLgL~I~KA~ISTdG~~~~DVFyVTD~ 140 (143)
..|.||-+.+-|.+-|+....-....+++.-.-.|.||+.
T Consensus 55 s~gtLY~~L~rLe~~GlI~~~~~~~~~~~~~rk~Y~LT~~ 94 (115)
T 2dql_A 55 SDTVLYSAIKFLEDNRAITGYWKKLEGRGRPRRMYQVSPE 94 (115)
T ss_dssp CHHHHHHHHHHHHHTTSEEEEEECCTTCSSCEEEEEECGG
T ss_pred CcchHHHHHHHHHHCCCEEEEeeecCCCCCCcEEEEECHH
Confidence 4699999999999999965543222134555667888875
No 55
>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2
Probab=22.57 E-value=1.5e+02 Score=18.51 Aligned_cols=35 Identities=11% Similarity=0.195 Sum_probs=26.0
Q ss_pred HHHHHHHHHhcCceEEEEEEEeCCCcceEEEEEeccc
Q 032291 105 LLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKAY 141 (143)
Q Consensus 105 LldivqaL~dLgL~I~KA~ISTdG~~~~DVFyVTD~d 141 (143)
+-++.+.|.+.|..+...-... .|-.-.||+.|.+
T Consensus 74 ~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~DPd 108 (118)
T 2i7r_A 74 VDQNYKRLNELGIKVLHGPTVT--DWGTESLLVQGPA 108 (118)
T ss_dssp HHHHHHHHHHHTCCEEEEEEEC--TTSCEEEEEECGG
T ss_pred HHHHHHHHHHCCCceecCCccc--cCccEEEEEECCC
Confidence 7788899999999986654433 3445678899876
No 56
>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}
Probab=21.64 E-value=1.5e+02 Score=18.33 Aligned_cols=36 Identities=8% Similarity=0.092 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhcCceEEEEEEEeCCCcceEEEEEeccc
Q 032291 104 ALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKAY 141 (143)
Q Consensus 104 LLldivqaL~dLgL~I~KA~ISTdG~~~~DVFyVTD~d 141 (143)
-+-++.+.|++.|..+...-.. ..|-.-.||+.|.+
T Consensus 84 ~v~~~~~~l~~~G~~~~~~~~~--~~~g~~~~~~~DPd 119 (127)
T 3e5d_A 84 AVDELTEKLRQDGFAIAGEPRM--TGDGYYESVVLDPE 119 (127)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEE--CTTSCEEEEEECTT
T ss_pred HHHHHHHHHHHcCCeEecCccc--CCCCcEEEEEECCC
Confidence 3778889999999999876432 23334568899876
No 57
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=21.19 E-value=1.8e+02 Score=19.00 Aligned_cols=43 Identities=9% Similarity=0.033 Sum_probs=28.9
Q ss_pred eEEEEEeCCcccHHHHHHHHHHhcCce-EEEEEEEeCCCcceEEEEEeccc
Q 032291 92 TIVEITFGDRLGALLDTMNALKNLGLN-VVKANVFLDSSGKHNKFAITKAY 141 (143)
Q Consensus 92 TIVeV~s~DR~GLLldivqaL~dLgL~-I~KA~ISTdG~~~~DVFyVTD~d 141 (143)
..+-+...| +-++.+.|+++|.. +...-.... |-.- ||+.|.+
T Consensus 68 ~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~~--~G~~-~~~~DPd 111 (128)
T 3g12_A 68 LQLGFQITD----LEKTVQELVKIPGAMCILDPTDMP--DGKK-AIVLDPD 111 (128)
T ss_dssp EEEEEEESC----HHHHHHHHTTSTTCEEEEEEEECC---CEE-EEEECTT
T ss_pred eEEEEEeCC----HHHHHHHHHHCCCceeccCceeCC--CccE-EEEECCC
Confidence 344455555 78889999999999 765444332 3333 9999976
No 58
>4esf_A PADR-like transcriptional regulator; PADR family, DNA binding protein, HTH fold; 2.20A {Bacillus cereus}
Probab=21.11 E-value=1.2e+02 Score=20.85 Aligned_cols=39 Identities=13% Similarity=0.169 Sum_probs=25.8
Q ss_pred cccHHHHHHHHHHhcCceEEEEEEEeCCCcceEEEEEecc
Q 032291 101 RLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKA 140 (143)
Q Consensus 101 R~GLLldivqaL~dLgL~I~KA~ISTdG~~~~DVFyVTD~ 140 (143)
.+|.||-+.+-|.+-||....-.. .+++.---.|.+|+.
T Consensus 43 s~gtlY~~L~rLe~~GlI~~~~~~-~~~g~~rk~Y~LT~~ 81 (117)
T 4esf_A 43 VEGTVYTILVRLEKKKLVNIEKKP-SDMGPPRKFYSLNEA 81 (117)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC------CEEEEEECHH
T ss_pred CccHHHHHHHHHHHCCCEEEEeec-CCCCCCceEEEECHH
Confidence 479999999999999997555332 234444556778864
No 59
>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}
Probab=20.90 E-value=1.2e+02 Score=20.16 Aligned_cols=36 Identities=11% Similarity=-0.030 Sum_probs=25.7
Q ss_pred HHHHHHHHHHhcCceEEEEEEEeCCCcceEEEEEeccc
Q 032291 104 ALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKAY 141 (143)
Q Consensus 104 LLldivqaL~dLgL~I~KA~ISTdG~~~~DVFyVTD~d 141 (143)
-|-++.+.|++.|..+....... .+....||+.|.+
T Consensus 97 dld~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~~DPd 132 (141)
T 3ghj_A 97 EIEPLKKALESKGVSVHGPVNQE--WMQAVSLYFADPN 132 (141)
T ss_dssp GHHHHHHHHHHTTCCCEEEEEEG--GGTEEEEEEECTT
T ss_pred HHHHHHHHHHHCCCeEeCCcccC--CCCceEEEEECCC
Confidence 47888999999999998333222 2235689999976
No 60
>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A
Probab=20.78 E-value=1.1e+02 Score=20.14 Aligned_cols=37 Identities=16% Similarity=0.251 Sum_probs=27.8
Q ss_pred HHHHHHHHHhcCceEEEEEEEeCCC-cceEEEEEeccc
Q 032291 105 LLDTMNALKNLGLNVVKANVFLDSS-GKHNKFAITKAY 141 (143)
Q Consensus 105 LldivqaL~dLgL~I~KA~ISTdG~-~~~DVFyVTD~d 141 (143)
|-++.+.|++.|..+...-....+. ...-.||+.|.+
T Consensus 97 l~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPd 134 (152)
T 3huh_A 97 INDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPD 134 (152)
T ss_dssp HHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTT
T ss_pred HHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCC
Confidence 7888899999999988765544333 345788999876
No 61
>3tfg_A ALR2278 protein; heme-based sensor domain, GAS binding, signaling protein; HET: HEM; 1.90A {Nostoc SP} PDB: 3tfd_A* 3tfe_A* 3tff_A* 2o09_A* 2o0c_A* 2o0g_A* 3l6j_A* 3tf8_A* 3tf9_A* 3tfa_A*
Probab=20.71 E-value=2.5e+02 Score=20.87 Aligned_cols=62 Identities=15% Similarity=0.148 Sum_probs=38.3
Q ss_pred ccCCCEEEEcCCCCCCceEEEEEeCCcc-------cHHHHHHHHHHhcCceEEEEEEEeCCCcceEEEEEecc
Q 032291 75 TIPTPKVIIDLDSDPDATIVEITFGDRL-------GALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKA 140 (143)
Q Consensus 75 ~~~~PrV~IDNdss~~aTIVeV~s~DR~-------GLLldivqaL~dLgL~I~KA~ISTdG~~~~DVFyVTD~ 140 (143)
.+.+|...+...++ + +++=.+.-.|+ |+|..+++- .+..+.|...... +++.-.++|.|+-.
T Consensus 114 ~~~~Psf~~~~~~~-~-~l~l~Y~S~R~gl~~~~~Gli~~~A~~-f~~~v~i~~~~~~-~~~~~h~~f~i~~~ 182 (189)
T 3tfg_A 114 QLRPPAFECQHTSS-K-SMELHYQSTRCGLAPMVLGLLHGLGKR-FQTKVEVTQTAFR-ETGEDHDIFSIKYE 182 (189)
T ss_dssp TCCCCEEEEEEEET-T-EEEEEEECSSSSCHHHHHHHHHHHHHH-TTCEEEEEEEECT-TTTSSSEEEEEEEE
T ss_pred CCCCCeEEEEECCC-C-EEEEEEECCCCCHHHHHHHHHHHHHHH-hCCCeEEEEEecc-CCCCCeEEEEEEEC
Confidence 46788887776553 3 44445555665 888888884 5555555544432 34445899999743
No 62
>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*
Probab=20.49 E-value=1.8e+02 Score=18.77 Aligned_cols=36 Identities=6% Similarity=-0.148 Sum_probs=26.3
Q ss_pred HHHHHHHHHHhcCceEEEEEEEeCCCcceEEEEEeccc
Q 032291 104 ALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKAY 141 (143)
Q Consensus 104 LLldivqaL~dLgL~I~KA~ISTdG~~~~DVFyVTD~d 141 (143)
-+-++.+.|++.|..+...-.... |-.-.||++|.+
T Consensus 84 dv~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~DPd 119 (138)
T 2a4x_A 84 SVDKKYAELVDAGYEGHLKPWNAV--WGQRYAIVKDPD 119 (138)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEET--TTEEEEEEECTT
T ss_pred HHHHHHHHHHHCCCceeeCCcccC--CCcEEEEEECCC
Confidence 477788999999999876544432 335678999876
No 63
>1rlf_A RLF, RLF-RBD; signal transduction protein; NMR {Mus musculus} SCOP: d.15.1.5
Probab=20.18 E-value=1.5e+02 Score=21.13 Aligned_cols=37 Identities=16% Similarity=0.215 Sum_probs=29.1
Q ss_pred EEEEcC-CCCCCceEEEEEeCCcccHHHHHHHHHHhcCce
Q 032291 80 KVIIDL-DSDPDATIVEITFGDRLGALLDTMNALKNLGLN 118 (143)
Q Consensus 80 rV~IDN-dss~~aTIVeV~s~DR~GLLldivqaL~dLgL~ 118 (143)
||.||+ +....|--|.|++.||--.+ |.++|.++||.
T Consensus 9 RVs~e~~~~Gn~YKSIlltsqDktp~v--I~~al~Khnl~ 46 (90)
T 1rlf_A 9 RVQMELGEDGSVYKSILVTSQDKAPSV--ISRVLKKNNRD 46 (90)
T ss_dssp EEEECCSSSCCSCCEEEEETTCCCTTH--HHHHHHHTTTT
T ss_pred EEEEEeCCCCceEEEEEEecCCCcHHH--HHHHHHHcCCC
Confidence 788885 67778888999999997655 56788888875
No 64
>1xma_A Predicted transcriptional regulator; southea collaboratory for structural genomics, secsg, protein struc initiative, PSI; 2.30A {Clostridium thermocellum} SCOP: a.4.5.61
Probab=20.14 E-value=1.8e+02 Score=20.85 Aligned_cols=39 Identities=13% Similarity=0.098 Sum_probs=27.2
Q ss_pred cccHHHHHHHHHHhcCceEEEEEEEeCCCcceEEEEEecc
Q 032291 101 RLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKA 140 (143)
Q Consensus 101 R~GLLldivqaL~dLgL~I~KA~ISTdG~~~~DVFyVTD~ 140 (143)
..|.|+.+.+-|.+-||......-. +++.-.-.|.+|+.
T Consensus 75 s~gtLy~~L~rLE~~GlI~~~~~~~-~~~~~rk~Y~LT~~ 113 (145)
T 1xma_A 75 KETTLYSAFARLEKNGYIKSYYGEE-TQGKRRTYYRITPE 113 (145)
T ss_dssp CHHHHHHHHHHHHHTTSEEEEEEEE-C--CEEEEEEECHH
T ss_pred ChhHHHHHHHHHHHCCCEEEEEecc-CCCCCeEEEEECHH
Confidence 4699999999999999976554433 33444556788864
Done!