Query 032292
Match_columns 143
No_of_seqs 203 out of 1773
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 19:49:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032292.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032292hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3r3h_A O-methyltransferase, SA 100.0 4.4E-29 1.5E-33 187.1 14.8 136 1-142 42-220 (242)
2 3dr5_A Putative O-methyltransf 100.0 1.2E-28 4E-33 182.7 15.8 135 2-142 36-213 (221)
3 3c3y_A Pfomt, O-methyltransfer 100.0 1.1E-28 3.7E-33 184.2 14.3 142 1-143 52-237 (237)
4 1sui_A Caffeoyl-COA O-methyltr 100.0 2.1E-28 7.2E-33 183.9 13.2 142 1-143 61-247 (247)
5 3cbg_A O-methyltransferase; cy 99.9 1.1E-26 3.8E-31 172.6 15.5 136 1-142 54-232 (232)
6 3tr6_A O-methyltransferase; ce 99.9 2.3E-26 7.9E-31 168.9 13.6 137 1-143 46-225 (225)
7 3ntv_A MW1564 protein; rossman 99.9 3.6E-26 1.2E-30 169.7 13.4 138 3-142 55-231 (232)
8 3duw_A OMT, O-methyltransferas 99.9 1.7E-25 5.8E-30 164.2 16.2 137 1-143 40-223 (223)
9 3tfw_A Putative O-methyltransf 99.9 2.7E-25 9.1E-30 166.7 16.7 136 1-142 45-225 (248)
10 2avd_A Catechol-O-methyltransf 99.9 2.1E-25 7.3E-30 164.1 15.3 136 1-142 51-229 (229)
11 2hnk_A SAM-dependent O-methylt 99.9 1.1E-23 3.9E-28 156.5 14.7 136 1-142 42-231 (239)
12 3c3p_A Methyltransferase; NP_9 99.9 1.2E-23 4E-28 153.4 13.8 133 2-142 39-209 (210)
13 3u81_A Catechol O-methyltransf 99.9 9E-22 3.1E-26 144.6 13.9 121 1-142 40-213 (221)
14 2gpy_A O-methyltransferase; st 99.9 5.1E-22 1.8E-26 146.7 11.2 139 2-143 37-215 (233)
15 3cvo_A Methyltransferase-like 99.6 8.8E-16 3E-20 112.2 7.8 106 1-130 14-182 (202)
16 2wk1_A NOVP; transferase, O-me 99.6 7.6E-15 2.6E-19 112.2 9.5 120 2-141 85-280 (282)
17 2bm8_A Cephalosporin hydroxyla 99.5 2.8E-13 9.7E-18 100.6 10.2 83 5-87 67-188 (236)
18 3jwh_A HEN1; methyltransferase 99.3 4.1E-11 1.4E-15 86.9 10.4 132 3-135 13-194 (217)
19 2b2c_A Spermidine synthase; be 99.3 9.5E-12 3.2E-16 96.3 7.4 112 17-142 106-269 (314)
20 3orh_A Guanidinoacetate N-meth 99.2 5.7E-12 1.9E-16 93.4 5.3 82 10-91 49-175 (236)
21 2o07_A Spermidine synthase; st 99.2 1.9E-11 6.4E-16 94.2 8.3 110 18-142 94-256 (304)
22 3sso_A Methyltransferase; macr 99.2 8.1E-11 2.8E-15 93.8 11.3 123 19-142 216-392 (419)
23 3jwg_A HEN1, methyltransferase 99.2 1.1E-10 3.7E-15 84.7 11.0 131 4-135 14-194 (219)
24 3e05_A Precorrin-6Y C5,15-meth 99.2 1.2E-10 4.2E-15 83.7 10.0 81 6-87 27-143 (204)
25 3mti_A RRNA methylase; SAM-dep 99.1 7.3E-10 2.5E-14 78.2 11.8 99 18-130 21-166 (185)
26 1uir_A Polyamine aminopropyltr 99.1 3E-10 1E-14 87.7 9.3 112 17-141 75-241 (314)
27 1nkv_A Hypothetical protein YJ 99.1 1.8E-10 6.2E-15 85.1 7.6 86 4-89 21-143 (256)
28 3f4k_A Putative methyltransfer 99.1 1.1E-10 3.8E-15 86.3 6.3 80 10-89 37-153 (257)
29 4gek_A TRNA (CMO5U34)-methyltr 99.1 3.9E-10 1.3E-14 85.0 9.3 79 10-88 59-180 (261)
30 3fpf_A Mtnas, putative unchara 99.1 1.7E-10 5.9E-15 88.6 7.3 73 13-87 116-223 (298)
31 4df3_A Fibrillarin-like rRNA/T 99.1 1.9E-10 6.4E-15 85.7 7.0 69 17-85 75-181 (233)
32 1xj5_A Spermidine synthase 1; 99.1 6.5E-10 2.2E-14 86.7 10.0 81 9-90 108-240 (334)
33 3gu3_A Methyltransferase; alph 99.1 2.3E-10 7.9E-15 86.5 6.9 75 14-88 17-128 (284)
34 3hm2_A Precorrin-6Y C5,15-meth 99.1 4E-10 1.4E-14 78.7 7.2 78 9-88 15-129 (178)
35 3mb5_A SAM-dependent methyltra 99.1 4.4E-10 1.5E-14 83.3 7.8 81 4-86 78-194 (255)
36 1nt2_A Fibrillarin-like PRE-rR 99.0 5.6E-10 1.9E-14 81.4 8.0 67 18-85 56-160 (210)
37 3njr_A Precorrin-6Y methylase; 99.0 1.5E-09 5E-14 78.6 10.1 80 6-88 42-156 (204)
38 4hg2_A Methyltransferase type 99.0 4.2E-10 1.4E-14 84.7 7.2 76 10-85 29-134 (257)
39 3dh0_A SAM dependent methyltra 99.0 2.1E-09 7.2E-14 77.6 10.7 75 15-89 33-146 (219)
40 1xdz_A Methyltransferase GIDB; 99.0 5.5E-10 1.9E-14 82.4 7.7 66 18-85 69-173 (240)
41 3eey_A Putative rRNA methylase 99.0 3.8E-09 1.3E-13 75.2 11.6 69 17-85 20-138 (197)
42 3kkz_A Uncharacterized protein 99.0 3.3E-10 1.1E-14 84.6 6.3 71 17-89 44-153 (267)
43 1mjf_A Spermidine synthase; sp 99.0 2E-09 6.7E-14 81.8 9.8 111 17-142 73-239 (281)
44 3p9n_A Possible methyltransfer 99.0 2.3E-09 7.7E-14 76.2 9.5 70 18-87 43-154 (189)
45 3id6_C Fibrillarin-like rRNA/T 99.0 7.7E-10 2.6E-14 82.3 7.2 69 17-85 74-180 (232)
46 1zx0_A Guanidinoacetate N-meth 99.0 5.2E-10 1.8E-14 82.2 5.9 79 9-87 48-171 (236)
47 3lbf_A Protein-L-isoaspartate 99.0 7.2E-10 2.5E-14 79.8 6.5 79 4-85 62-173 (210)
48 3bus_A REBM, methyltransferase 99.0 1.5E-09 5.2E-14 80.9 8.4 81 9-89 48-169 (273)
49 2p7i_A Hypothetical protein; p 99.0 1.6E-09 5.4E-14 79.1 8.2 79 9-87 32-142 (250)
50 1vl5_A Unknown conserved prote 99.0 1.7E-09 5.8E-14 80.3 8.4 76 12-87 30-141 (260)
51 1l3i_A Precorrin-6Y methyltran 99.0 2.9E-09 9.9E-14 74.7 8.9 82 5-86 19-134 (192)
52 3hem_A Cyclopropane-fatty-acyl 99.0 1.2E-09 4.2E-14 83.0 7.4 72 18-89 71-186 (302)
53 1iy9_A Spermidine synthase; ro 99.0 2.9E-09 9.7E-14 80.7 9.3 68 18-86 74-189 (275)
54 1xxl_A YCGJ protein; structura 99.0 3.5E-09 1.2E-13 77.9 9.5 84 5-88 7-126 (239)
55 2cmg_A Spermidine synthase; tr 99.0 2.2E-09 7.4E-14 81.0 8.4 64 18-85 71-170 (262)
56 3grz_A L11 mtase, ribosomal pr 99.0 5.6E-09 1.9E-13 74.9 10.2 80 7-88 47-161 (205)
57 3mgg_A Methyltransferase; NYSG 98.9 9.8E-10 3.4E-14 82.2 6.1 71 18-89 36-145 (276)
58 2o57_A Putative sarcosine dime 98.9 1.9E-09 6.6E-14 81.5 7.7 74 16-89 79-190 (297)
59 2yxe_A Protein-L-isoaspartate 98.9 1.4E-09 4.7E-14 78.6 6.6 78 5-85 63-176 (215)
60 2ex4_A Adrenal gland protein A 98.9 1.4E-09 4.8E-14 80.0 6.7 81 7-87 63-186 (241)
61 3dlc_A Putative S-adenosyl-L-m 98.9 2.2E-09 7.6E-14 76.9 7.5 71 19-89 43-151 (219)
62 3evz_A Methyltransferase; NYSG 98.9 2.7E-09 9.3E-14 77.7 8.1 77 8-84 44-177 (230)
63 1g8a_A Fibrillarin-like PRE-rR 98.9 2.1E-09 7.3E-14 78.3 7.5 68 18-85 72-177 (227)
64 1dus_A MJ0882; hypothetical pr 98.9 1.4E-08 4.7E-13 71.3 11.5 80 7-87 40-158 (194)
65 3g89_A Ribosomal RNA small sub 98.9 1.4E-09 4.9E-14 81.3 6.6 64 19-84 80-182 (249)
66 3thr_A Glycine N-methyltransfe 98.9 2.7E-09 9.2E-14 80.4 8.2 80 7-86 45-175 (293)
67 1ej0_A FTSJ; methyltransferase 98.9 1.8E-09 6.3E-14 74.5 6.7 70 17-86 20-136 (180)
68 3adn_A Spermidine synthase; am 98.9 6.4E-09 2.2E-13 79.7 10.3 67 18-85 82-197 (294)
69 2esr_A Methyltransferase; stru 98.9 1.9E-09 6.5E-14 75.5 6.7 68 17-86 29-138 (177)
70 3dli_A Methyltransferase; PSI- 98.9 2.1E-09 7.2E-14 79.0 7.2 71 18-88 40-142 (240)
71 3ege_A Putative methyltransfer 98.9 4.6E-09 1.6E-13 78.3 9.1 81 5-86 20-130 (261)
72 3h2b_A SAM-dependent methyltra 98.9 3.6E-09 1.2E-13 75.6 8.2 80 7-87 30-142 (203)
73 3g5l_A Putative S-adenosylmeth 98.9 1.5E-09 5.2E-14 80.1 6.2 67 19-85 44-144 (253)
74 3htx_A HEN1; HEN1, small RNA m 98.9 1.4E-08 4.9E-13 87.1 12.7 122 9-135 711-900 (950)
75 2plw_A Ribosomal RNA methyltra 98.9 3.3E-09 1.1E-13 75.7 7.4 68 18-85 21-153 (201)
76 1o54_A SAM-dependent O-methylt 98.9 4.4E-09 1.5E-13 79.2 8.4 81 4-86 97-213 (277)
77 3ou2_A SAM-dependent methyltra 98.9 4.9E-09 1.7E-13 75.3 8.3 79 9-87 36-147 (218)
78 3gjy_A Spermidine synthase; AP 98.9 4.7E-09 1.6E-13 81.3 8.5 68 18-86 86-200 (317)
79 3e8s_A Putative SAM dependent 98.9 6.8E-09 2.3E-13 74.7 8.9 71 17-87 50-153 (227)
80 3ujc_A Phosphoethanolamine N-m 98.9 1.8E-09 6E-14 79.9 5.9 71 18-88 54-161 (266)
81 1dl5_A Protein-L-isoaspartate 98.9 2.3E-09 8E-14 82.4 6.7 78 5-85 61-174 (317)
82 3dtn_A Putative methyltransfer 98.9 1.9E-09 6.4E-14 78.7 5.7 70 18-88 43-150 (234)
83 3e23_A Uncharacterized protein 98.9 4.4E-09 1.5E-13 75.7 7.5 71 16-86 40-141 (211)
84 1sqg_A SUN protein, FMU protei 98.9 2E-08 6.9E-13 80.4 12.0 84 4-88 231-376 (429)
85 3ocj_A Putative exported prote 98.9 1.6E-09 5.4E-14 82.6 5.3 73 17-89 116-230 (305)
86 1jsx_A Glucose-inhibited divis 98.9 4.4E-09 1.5E-13 75.3 7.3 65 19-85 65-164 (207)
87 1ixk_A Methyltransferase; open 98.9 5.1E-09 1.8E-13 80.7 8.1 83 5-87 104-247 (315)
88 2xvm_A Tellurite resistance pr 98.9 7.6E-09 2.6E-13 73.3 8.5 74 12-85 25-135 (199)
89 2p35_A Trans-aconitate 2-methy 98.9 3.2E-09 1.1E-13 78.3 6.8 68 18-86 32-132 (259)
90 2p8j_A S-adenosylmethionine-de 98.9 4.7E-09 1.6E-13 75.1 7.4 82 6-87 10-129 (209)
91 2yxl_A PH0851 protein, 450AA l 98.9 2.1E-08 7.2E-13 80.8 12.0 84 5-88 245-391 (450)
92 3ofk_A Nodulation protein S; N 98.9 2.4E-09 8.1E-14 77.3 5.8 78 9-86 41-154 (216)
93 2ipx_A RRNA 2'-O-methyltransfe 98.9 4.1E-09 1.4E-13 77.3 7.1 68 18-85 76-181 (233)
94 3bkw_A MLL3908 protein, S-aden 98.9 4.6E-09 1.6E-13 76.7 7.3 77 10-86 34-144 (243)
95 1kpg_A CFA synthase;, cyclopro 98.9 3.7E-09 1.3E-13 79.5 6.8 81 9-89 51-171 (287)
96 3g5t_A Trans-aconitate 3-methy 98.9 7E-09 2.4E-13 78.7 8.4 67 18-84 35-147 (299)
97 1inl_A Spermidine synthase; be 98.9 1.2E-08 4E-13 78.1 9.6 67 18-85 89-204 (296)
98 2fpo_A Methylase YHHF; structu 98.9 6.4E-09 2.2E-13 75.0 7.6 68 19-86 54-160 (202)
99 1yzh_A TRNA (guanine-N(7)-)-me 98.9 6.7E-09 2.3E-13 75.2 7.8 66 19-85 41-155 (214)
100 3hp7_A Hemolysin, putative; st 98.9 3.2E-09 1.1E-13 81.4 6.3 66 19-84 85-183 (291)
101 2kw5_A SLR1183 protein; struct 98.9 8.9E-09 3E-13 73.5 8.3 79 10-88 20-133 (202)
102 3hnr_A Probable methyltransfer 98.9 1E-08 3.6E-13 73.9 8.7 80 9-89 36-148 (220)
103 3lpm_A Putative methyltransfer 98.9 4.3E-09 1.5E-13 78.5 6.7 77 8-84 37-174 (259)
104 3ccf_A Cyclopropane-fatty-acyl 98.9 8.7E-09 3E-13 77.3 8.4 73 14-86 52-154 (279)
105 2nxc_A L11 mtase, ribosomal pr 98.9 3.3E-08 1.1E-12 73.8 11.4 79 9-88 109-220 (254)
106 1fbn_A MJ fibrillarin homologu 98.9 5.1E-09 1.7E-13 76.8 6.9 67 18-85 73-177 (230)
107 3i9f_A Putative type 11 methyl 98.8 4.8E-09 1.6E-13 72.9 6.3 74 16-89 14-115 (170)
108 2pt6_A Spermidine synthase; tr 98.8 2.6E-08 8.8E-13 77.1 10.9 69 17-86 114-230 (321)
109 2fk8_A Methoxy mycolic acid sy 98.8 5.3E-09 1.8E-13 79.9 7.0 82 8-89 76-197 (318)
110 2yvl_A TRMI protein, hypotheti 98.8 1.2E-08 4.1E-13 74.9 8.6 79 4-85 76-189 (248)
111 4dzr_A Protein-(glutamine-N5) 98.8 2.9E-09 1E-13 76.1 5.1 38 5-42 12-53 (215)
112 3g07_A 7SK snRNA methylphospha 98.8 5.2E-09 1.8E-13 79.5 6.7 41 50-90 175-224 (292)
113 3vc1_A Geranyl diphosphate 2-C 98.8 3.9E-09 1.3E-13 80.7 5.9 72 17-88 115-223 (312)
114 3l8d_A Methyltransferase; stru 98.8 1.3E-08 4.5E-13 74.3 8.4 76 11-86 44-153 (242)
115 1jg1_A PIMT;, protein-L-isoasp 98.8 6E-09 2.1E-13 76.5 6.5 79 4-85 76-188 (235)
116 4htf_A S-adenosylmethionine-de 98.8 1.3E-08 4.4E-13 76.5 8.5 69 19-87 68-174 (285)
117 3cgg_A SAM-dependent methyltra 98.8 2.3E-08 7.7E-13 70.2 9.2 76 9-86 38-147 (195)
118 1wzn_A SAM-dependent methyltra 98.8 2.3E-08 8E-13 73.6 9.6 79 8-86 27-145 (252)
119 2ift_A Putative methylase HI07 98.8 1.1E-08 3.8E-13 73.7 7.6 70 18-87 52-164 (201)
120 3m33_A Uncharacterized protein 98.8 2E-09 6.8E-14 78.7 3.8 63 18-83 47-139 (226)
121 2fhp_A Methylase, putative; al 98.8 5E-09 1.7E-13 73.6 5.7 70 17-86 42-154 (187)
122 3tos_A CALS11; methyltransfera 98.8 3.2E-08 1.1E-12 74.6 10.3 74 50-140 180-254 (257)
123 2pwy_A TRNA (adenine-N(1)-)-me 98.8 9.1E-09 3.1E-13 76.0 7.2 80 5-86 82-198 (258)
124 1i9g_A Hypothetical protein RV 98.8 1E-08 3.6E-13 76.8 7.6 81 4-86 84-203 (280)
125 2yqz_A Hypothetical protein TT 98.8 1.3E-08 4.3E-13 75.2 8.0 69 17-85 37-140 (263)
126 3m70_A Tellurite resistance pr 98.8 1.9E-08 6.5E-13 75.6 9.1 76 9-85 111-222 (286)
127 3dxy_A TRNA (guanine-N(7)-)-me 98.8 6.6E-09 2.3E-13 76.1 6.3 67 19-85 34-149 (218)
128 3dou_A Ribosomal RNA large sub 98.8 1.3E-08 4.5E-13 73.1 7.7 68 18-85 24-138 (191)
129 2yxd_A Probable cobalt-precorr 98.8 2.5E-08 8.5E-13 69.5 8.9 76 5-86 21-131 (183)
130 2zfu_A Nucleomethylin, cerebra 98.8 1E-08 3.6E-13 73.9 7.1 79 9-87 57-152 (215)
131 1yb2_A Hypothetical protein TA 98.8 4.4E-09 1.5E-13 79.2 5.3 76 9-86 100-211 (275)
132 1ws6_A Methyltransferase; stru 98.8 1.4E-08 4.8E-13 70.2 7.5 67 19-86 41-147 (171)
133 3m6w_A RRNA methylase; rRNA me 98.8 1.7E-08 5.8E-13 81.9 9.0 82 6-87 88-230 (464)
134 2b3t_A Protein methyltransfera 98.8 1.7E-08 5.7E-13 76.0 8.4 80 5-85 93-237 (276)
135 2nyu_A Putative ribosomal RNA 98.8 1.5E-08 5E-13 71.9 7.7 69 18-86 21-145 (196)
136 2pbf_A Protein-L-isoaspartate 98.8 7.7E-09 2.6E-13 75.2 6.3 74 9-85 69-192 (227)
137 2avn_A Ubiquinone/menaquinone 98.8 1.6E-08 5.3E-13 75.3 7.8 67 19-85 54-151 (260)
138 1i1n_A Protein-L-isoaspartate 98.8 9.5E-09 3.3E-13 74.7 6.5 74 9-85 66-181 (226)
139 1xtp_A LMAJ004091AAA; SGPP, st 98.8 8.9E-09 3E-13 75.8 6.4 70 18-87 92-198 (254)
140 3dmg_A Probable ribosomal RNA 98.8 1.6E-08 5.6E-13 80.0 8.2 82 4-85 213-339 (381)
141 1y8c_A S-adenosylmethionine-de 98.8 1.8E-08 6.2E-13 73.5 7.9 78 8-85 24-141 (246)
142 3pfg_A N-methyltransferase; N, 98.8 1.1E-08 3.8E-13 76.0 6.8 68 19-86 50-151 (263)
143 2fca_A TRNA (guanine-N(7)-)-me 98.8 1.5E-08 5.1E-13 73.7 7.3 66 19-85 38-152 (213)
144 4dcm_A Ribosomal RNA large sub 98.8 1.1E-08 3.8E-13 80.7 7.0 66 18-84 221-332 (375)
145 1vbf_A 231AA long hypothetical 98.8 1.4E-08 4.7E-13 74.0 7.0 78 5-85 56-164 (231)
146 3q87_B N6 adenine specific DNA 98.8 2.6E-08 8.9E-13 69.9 7.8 78 5-85 8-122 (170)
147 1ve3_A Hypothetical protein PH 98.8 2.1E-08 7.2E-13 72.4 7.5 78 10-88 28-144 (227)
148 2b25_A Hypothetical protein; s 98.8 2.2E-08 7.5E-13 77.4 7.8 79 5-85 91-218 (336)
149 3sm3_A SAM-dependent methyltra 98.7 2.1E-08 7.2E-13 72.6 7.1 70 18-87 29-142 (235)
150 3ajd_A Putative methyltransfer 98.7 9.5E-09 3.2E-13 77.6 5.4 79 9-87 73-212 (274)
151 2pxx_A Uncharacterized protein 98.7 1.6E-08 5.4E-13 72.3 6.2 77 10-86 32-159 (215)
152 3lcc_A Putative methyl chlorid 98.7 7.1E-08 2.4E-12 70.4 9.7 69 19-87 66-172 (235)
153 1vlm_A SAM-dependent methyltra 98.7 2E-08 6.7E-13 72.8 6.7 79 10-88 38-141 (219)
154 3iv6_A Putative Zn-dependent a 98.7 2.1E-08 7E-13 75.7 6.8 76 9-85 35-147 (261)
155 3bxo_A N,N-dimethyltransferase 98.7 3.8E-08 1.3E-12 71.6 8.1 71 18-88 39-143 (239)
156 3d2l_A SAM-dependent methyltra 98.7 4.4E-08 1.5E-12 71.5 8.2 75 10-85 23-136 (243)
157 3q7e_A Protein arginine N-meth 98.7 1.7E-08 5.7E-13 78.8 6.3 70 16-85 63-172 (349)
158 2ozv_A Hypothetical protein AT 98.7 1.7E-08 6E-13 75.5 6.1 77 8-84 25-168 (260)
159 3bwc_A Spermidine synthase; SA 98.7 2.5E-08 8.5E-13 76.5 7.0 67 18-85 94-209 (304)
160 3opn_A Putative hemolysin; str 98.7 2.1E-08 7.1E-13 74.3 6.3 66 19-84 37-135 (232)
161 2pjd_A Ribosomal RNA small sub 98.7 2.1E-08 7.3E-13 77.9 6.6 68 18-85 195-302 (343)
162 1u2z_A Histone-lysine N-methyl 98.7 4.6E-08 1.6E-12 78.7 8.7 79 11-89 234-362 (433)
163 2gs9_A Hypothetical protein TT 98.7 2.8E-08 9.6E-13 71.3 6.7 68 19-88 36-134 (211)
164 3cc8_A Putative methyltransfer 98.7 2.2E-08 7.6E-13 72.1 6.2 68 18-86 31-130 (230)
165 3a27_A TYW2, uncharacterized p 98.7 2.3E-08 7.8E-13 75.5 6.4 78 8-87 108-220 (272)
166 4fsd_A Arsenic methyltransfera 98.7 3.1E-08 1E-12 78.1 7.3 73 17-89 81-206 (383)
167 1p91_A Ribosomal RNA large sub 98.7 4.5E-08 1.5E-12 72.9 7.8 63 18-85 84-177 (269)
168 2i7c_A Spermidine synthase; tr 98.7 3E-08 1E-12 75.3 7.0 77 9-86 66-192 (283)
169 3dp7_A SAM-dependent methyltra 98.7 1.1E-07 3.6E-12 74.4 9.7 72 18-90 178-291 (363)
170 3m4x_A NOL1/NOP2/SUN family pr 98.7 1.5E-08 5E-13 82.1 4.7 82 6-87 92-235 (456)
171 2frx_A Hypothetical protein YE 98.7 7E-08 2.4E-12 78.5 8.7 82 6-87 102-247 (479)
172 1r18_A Protein-L-isoaspartate( 98.7 2.8E-08 9.4E-13 72.5 5.6 75 8-85 72-193 (227)
173 1ri5_A MRNA capping enzyme; me 98.7 5.2E-08 1.8E-12 73.1 7.2 69 18-86 63-174 (298)
174 3ckk_A TRNA (guanine-N(7)-)-me 98.7 3.7E-08 1.3E-12 72.9 6.1 68 18-85 45-167 (235)
175 1pjz_A Thiopurine S-methyltran 98.7 5.5E-08 1.9E-12 70.1 6.8 78 5-83 9-137 (203)
176 2gb4_A Thiopurine S-methyltran 98.6 1.2E-07 4E-12 71.0 8.7 80 6-85 55-190 (252)
177 3mq2_A 16S rRNA methyltransfer 98.6 3.1E-08 1.1E-12 71.6 5.4 67 17-85 25-139 (218)
178 1g6q_1 HnRNP arginine N-methyl 98.6 5.5E-08 1.9E-12 75.2 7.1 72 14-85 33-144 (328)
179 2fyt_A Protein arginine N-meth 98.6 5.1E-08 1.8E-12 75.8 6.9 70 16-85 61-170 (340)
180 2frn_A Hypothetical protein PH 98.6 2.9E-08 9.8E-13 75.1 5.1 69 18-87 124-226 (278)
181 3kr9_A SAM-dependent methyltra 98.6 3.9E-08 1.3E-12 72.8 5.6 76 11-87 6-120 (225)
182 4e2x_A TCAB9; kijanose, tetron 98.6 3E-08 1E-12 78.6 5.1 69 18-86 106-208 (416)
183 3bkx_A SAM-dependent methyltra 98.6 2.3E-07 7.7E-12 69.1 9.6 74 16-89 40-162 (275)
184 2aot_A HMT, histamine N-methyl 98.6 3.4E-08 1.2E-12 74.7 5.2 36 50-85 133-171 (292)
185 3r0q_C Probable protein argini 98.6 4.4E-08 1.5E-12 77.2 5.9 72 16-87 60-170 (376)
186 3mcz_A O-methyltransferase; ad 98.6 1.1E-07 3.8E-12 73.6 7.8 70 20-90 180-291 (352)
187 3fzg_A 16S rRNA methylase; met 98.6 6.1E-07 2.1E-11 65.0 11.1 112 18-142 48-197 (200)
188 3lst_A CALO1 methyltransferase 98.6 1.6E-07 5.3E-12 73.0 8.3 73 18-90 183-290 (348)
189 2y1w_A Histone-arginine methyl 98.6 8.3E-08 2.8E-12 74.8 6.6 69 17-85 48-154 (348)
190 3gwz_A MMCR; methyltransferase 98.6 1.8E-07 6E-12 73.3 8.5 72 18-90 201-311 (369)
191 3g2m_A PCZA361.24; SAM-depende 98.6 9.6E-08 3.3E-12 72.3 6.6 70 19-88 82-192 (299)
192 3tma_A Methyltransferase; thum 98.6 2.4E-07 8.3E-12 72.1 8.9 81 4-84 188-315 (354)
193 4dmg_A Putative uncharacterize 98.6 1.2E-07 4.2E-12 75.3 7.1 69 16-85 210-325 (393)
194 3ggd_A SAM-dependent methyltra 98.6 1.1E-07 3.8E-12 69.7 6.2 69 18-87 55-164 (245)
195 3i53_A O-methyltransferase; CO 98.6 1.2E-07 4.1E-12 73.0 6.5 71 19-90 169-278 (332)
196 2ip2_A Probable phenazine-spec 98.5 3.1E-07 1.1E-11 70.5 8.9 68 21-89 169-275 (334)
197 3uwp_A Histone-lysine N-methyl 98.5 1.4E-07 4.7E-12 75.6 6.6 77 14-90 168-292 (438)
198 2r3s_A Uncharacterized protein 98.5 6.1E-07 2.1E-11 68.7 10.0 71 18-89 164-274 (335)
199 2igt_A SAM dependent methyltra 98.5 6.4E-07 2.2E-11 69.6 10.2 78 11-88 144-274 (332)
200 3p9c_A Caffeic acid O-methyltr 98.5 4E-07 1.4E-11 71.3 8.6 71 18-90 200-302 (364)
201 2p41_A Type II methyltransfera 98.5 3.1E-07 1.1E-11 70.6 7.5 67 19-85 82-190 (305)
202 3lec_A NADB-rossmann superfami 98.5 2.8E-07 9.7E-12 68.3 7.1 76 11-87 12-126 (230)
203 1nv8_A HEMK protein; class I a 98.5 2.8E-07 9.5E-12 70.0 7.2 79 5-85 106-248 (284)
204 2g72_A Phenylethanolamine N-me 98.5 9.7E-08 3.3E-12 72.0 4.6 37 51-87 173-216 (289)
205 2qy6_A UPF0209 protein YFCK; s 98.5 1.3E-07 4.4E-12 71.2 4.9 33 52-84 173-211 (257)
206 2i62_A Nicotinamide N-methyltr 98.5 5.9E-08 2E-12 71.6 2.9 38 51-88 156-200 (265)
207 1tw3_A COMT, carminomycin 4-O- 98.5 4.2E-07 1.4E-11 70.5 7.8 70 18-88 182-290 (360)
208 4hc4_A Protein arginine N-meth 98.5 2.2E-07 7.6E-12 73.5 6.2 69 17-85 81-188 (376)
209 3reo_A (ISO)eugenol O-methyltr 98.5 3E-07 1E-11 72.1 6.8 70 19-90 203-304 (368)
210 2vdw_A Vaccinia virus capping 98.5 3E-07 1E-11 70.5 6.6 38 50-87 127-170 (302)
211 1fp1_D Isoliquiritigenin 2'-O- 98.5 2.7E-07 9.4E-12 72.2 6.3 71 18-89 208-309 (372)
212 2vdv_E TRNA (guanine-N(7)-)-me 98.4 4E-07 1.4E-11 67.2 6.8 67 19-85 49-172 (246)
213 3v97_A Ribosomal RNA large sub 98.4 3.1E-07 1E-11 77.9 6.9 76 13-88 533-659 (703)
214 1qzz_A RDMB, aclacinomycin-10- 98.4 3.9E-07 1.3E-11 70.9 7.0 69 18-87 181-288 (374)
215 3gdh_A Trimethylguanosine synt 98.4 1.8E-08 6.2E-13 73.9 -1.2 77 9-85 68-180 (241)
216 1x19_A CRTF-related protein; m 98.4 1.6E-06 5.6E-11 67.3 9.7 72 17-89 188-298 (359)
217 3bgv_A MRNA CAP guanine-N7 met 98.4 5.7E-07 2E-11 68.5 7.0 68 19-86 34-155 (313)
218 2as0_A Hypothetical protein PH 98.4 4.2E-07 1.4E-11 71.8 6.4 73 14-86 211-335 (396)
219 1wxx_A TT1595, hypothetical pr 98.4 1.7E-07 5.9E-12 73.8 4.1 73 13-86 204-325 (382)
220 2a14_A Indolethylamine N-methy 98.4 9.5E-08 3.3E-12 71.4 2.3 39 50-88 154-199 (263)
221 4a6d_A Hydroxyindole O-methylt 98.4 1.2E-06 4E-11 68.4 8.1 71 18-89 178-286 (353)
222 2ih2_A Modification methylase 98.4 1.2E-06 4.1E-11 69.1 8.2 80 5-84 25-162 (421)
223 2oxt_A Nucleoside-2'-O-methylt 98.4 9.2E-07 3.1E-11 66.7 7.0 68 18-86 73-185 (265)
224 3p2e_A 16S rRNA methylase; met 98.3 5.4E-07 1.8E-11 66.2 5.2 67 18-84 23-137 (225)
225 3gnl_A Uncharacterized protein 98.3 3.4E-07 1.2E-11 68.5 3.9 77 11-87 12-126 (244)
226 2wa2_A Non-structural protein 98.3 9.8E-07 3.4E-11 66.9 6.5 66 19-85 82-192 (276)
227 3b3j_A Histone-arginine methyl 98.3 8.2E-07 2.8E-11 72.2 6.3 65 18-84 157-261 (480)
228 3c0k_A UPF0064 protein YCCW; P 98.3 1E-06 3.4E-11 69.7 6.4 73 14-86 215-339 (396)
229 2qe6_A Uncharacterized protein 98.3 4.5E-06 1.6E-10 62.9 9.4 70 19-89 77-199 (274)
230 1ne2_A Hypothetical protein TA 98.3 5.6E-06 1.9E-10 58.8 9.1 78 5-85 34-146 (200)
231 1fp2_A Isoflavone O-methyltran 98.3 1.9E-06 6.6E-11 66.8 7.0 72 17-89 186-291 (352)
232 2b78_A Hypothetical protein SM 98.3 1.4E-06 4.7E-11 68.9 6.2 69 18-86 211-331 (385)
233 2qfm_A Spermine synthase; sper 98.3 1.2E-06 4.3E-11 68.8 5.8 67 19-85 188-313 (364)
234 1o9g_A RRNA methyltransferase; 98.2 1.8E-06 6.2E-11 63.7 6.0 32 9-40 38-72 (250)
235 1zg3_A Isoflavanone 4'-O-methy 98.2 3.5E-06 1.2E-10 65.4 7.3 72 17-89 191-296 (358)
236 3bzb_A Uncharacterized protein 98.2 2.8E-06 9.7E-11 64.1 6.5 67 18-84 78-203 (281)
237 2jjq_A Uncharacterized RNA met 98.2 8.9E-06 3E-10 65.2 9.6 82 3-85 273-386 (425)
238 2yx1_A Hypothetical protein MJ 98.2 3.8E-06 1.3E-10 65.1 7.0 67 18-87 194-292 (336)
239 1wy7_A Hypothetical protein PH 98.2 1.5E-05 5.3E-10 56.7 9.6 79 4-84 31-147 (207)
240 2xyq_A Putative 2'-O-methyl tr 98.1 8.2E-06 2.8E-10 62.3 8.2 67 17-85 61-170 (290)
241 2f8l_A Hypothetical protein LM 98.1 3.7E-06 1.3E-10 65.2 6.1 79 6-84 113-254 (344)
242 3k6r_A Putative transferase PH 98.1 3.7E-06 1.3E-10 63.9 5.9 69 18-87 124-226 (278)
243 3tm4_A TRNA (guanine N2-)-meth 98.1 1E-05 3.5E-10 63.5 8.0 39 3-42 202-240 (373)
244 3o4f_A Spermidine synthase; am 98.0 1.2E-05 4.3E-10 61.5 7.2 69 17-85 81-197 (294)
245 3lcv_B Sisomicin-gentamicin re 98.0 2.3E-05 8E-10 59.3 8.0 68 18-87 131-237 (281)
246 3frh_A 16S rRNA methylase; met 98.0 0.00018 6E-09 53.8 12.6 68 14-86 100-206 (253)
247 2dul_A N(2),N(2)-dimethylguano 98.0 1.8E-05 6.2E-10 62.5 7.4 68 18-86 46-164 (378)
248 2h00_A Methyltransferase 10 do 97.9 3.8E-06 1.3E-10 61.9 2.8 38 5-42 46-88 (254)
249 1zq9_A Probable dimethyladenos 97.9 3.5E-05 1.2E-09 58.3 8.1 38 4-41 13-50 (285)
250 3axs_A Probable N(2),N(2)-dime 97.9 1.1E-05 3.9E-10 64.0 5.5 66 19-85 52-157 (392)
251 2qm3_A Predicted methyltransfe 97.9 2.1E-05 7.2E-10 61.6 6.8 65 19-85 172-277 (373)
252 2b9e_A NOL1/NOP2/SUN domain fa 97.9 2.5E-05 8.6E-10 60.0 6.8 39 7-45 90-128 (309)
253 3evf_A RNA-directed RNA polyme 97.9 2.4E-05 8.1E-10 59.3 6.2 68 18-85 73-183 (277)
254 1af7_A Chemotaxis receptor met 97.9 2E-05 6.9E-10 59.6 5.8 35 51-85 212-251 (274)
255 3gru_A Dimethyladenosine trans 97.9 8.6E-05 3E-09 56.8 9.0 38 4-41 35-72 (295)
256 2h1r_A Dimethyladenosine trans 97.8 5.3E-05 1.8E-09 57.8 7.8 37 4-40 27-63 (299)
257 1uwv_A 23S rRNA (uracil-5-)-me 97.8 5.9E-05 2E-09 60.3 8.3 67 18-85 285-388 (433)
258 3giw_A Protein of unknown func 97.8 3.4E-05 1.2E-09 58.6 5.8 23 66-88 180-202 (277)
259 2ld4_A Anamorsin; methyltransf 97.7 1.6E-05 5.3E-10 55.4 3.1 71 17-87 10-102 (176)
260 3bt7_A TRNA (uracil-5-)-methyl 97.6 6.6E-05 2.3E-09 58.8 5.4 22 20-41 214-235 (369)
261 3gcz_A Polyprotein; flavivirus 97.6 5.4E-05 1.9E-09 57.4 4.3 68 18-85 89-200 (282)
262 2okc_A Type I restriction enzy 97.6 0.0001 3.5E-09 59.1 6.2 37 5-41 157-193 (445)
263 3c6k_A Spermine synthase; sper 97.6 0.00026 8.8E-09 56.0 8.3 106 19-142 205-378 (381)
264 3eld_A Methyltransferase; flav 97.5 0.00021 7.1E-09 54.7 6.5 68 18-85 80-190 (300)
265 4azs_A Methyltransferase WBDD; 97.5 9.1E-05 3.1E-09 61.2 4.3 23 18-40 65-87 (569)
266 3tqs_A Ribosomal RNA small sub 97.4 0.00013 4.6E-09 54.5 3.7 39 3-41 13-51 (255)
267 3b5i_A S-adenosyl-L-methionine 97.3 0.00026 8.7E-09 55.9 5.0 18 20-37 53-70 (374)
268 3uzu_A Ribosomal RNA small sub 97.3 0.00024 8.1E-09 53.8 4.2 39 4-42 27-65 (279)
269 1qam_A ERMC' methyltransferase 97.2 0.00023 7.8E-09 52.6 3.5 37 5-41 16-52 (244)
270 3ftd_A Dimethyladenosine trans 97.2 0.00031 1.1E-08 52.2 4.0 36 5-40 17-52 (249)
271 3s1s_A Restriction endonucleas 97.2 0.0039 1.3E-07 53.7 10.9 39 4-42 300-344 (878)
272 3fut_A Dimethyladenosine trans 97.1 0.00043 1.5E-08 52.2 4.4 37 4-41 32-68 (271)
273 2px2_A Genome polyprotein [con 97.1 0.00033 1.1E-08 52.6 3.3 68 18-85 72-182 (269)
274 2ar0_A M.ecoki, type I restric 97.0 0.00094 3.2E-08 54.9 5.4 36 6-41 156-191 (541)
275 1qyr_A KSGA, high level kasuga 97.0 0.00053 1.8E-08 51.1 3.6 35 4-39 6-40 (252)
276 4gqb_A Protein arginine N-meth 97.0 0.00058 2E-08 57.3 4.1 36 48-83 424-464 (637)
277 3lkd_A Type I restriction-modi 97.0 0.0062 2.1E-07 50.2 10.1 39 4-42 202-244 (542)
278 3khk_A Type I restriction-modi 96.9 0.0023 8E-08 52.7 7.5 35 4-39 230-264 (544)
279 3vyw_A MNMC2; tRNA wobble urid 96.9 0.0032 1.1E-07 48.4 7.3 35 50-84 184-224 (308)
280 2efj_A 3,7-dimethylxanthine me 96.8 0.0024 8.3E-08 50.5 6.0 21 20-40 53-73 (384)
281 1yub_A Ermam, rRNA methyltrans 96.7 0.00029 9.8E-09 51.8 0.5 37 5-41 15-51 (245)
282 2k4m_A TR8_protein, UPF0146 pr 96.7 0.0078 2.7E-07 41.5 7.5 33 19-61 35-68 (153)
283 3k0b_A Predicted N6-adenine-sp 96.6 0.0055 1.9E-07 48.4 7.3 36 5-40 187-222 (393)
284 3lkz_A Non-structural protein 96.6 0.0036 1.2E-07 47.9 5.6 67 18-84 93-202 (321)
285 3ldg_A Putative uncharacterize 96.6 0.0067 2.3E-07 47.8 7.4 35 6-40 181-215 (384)
286 1m6y_A S-adenosyl-methyltransf 96.5 0.0041 1.4E-07 47.5 5.7 26 17-42 24-49 (301)
287 3ldu_A Putative methylase; str 96.5 0.0053 1.8E-07 48.3 6.5 33 8-40 184-216 (385)
288 4fzv_A Putative methyltransfer 96.5 0.005 1.7E-07 48.2 6.0 34 9-42 138-171 (359)
289 3p8z_A Mtase, non-structural p 96.2 0.011 3.9E-07 43.9 6.3 66 18-84 77-184 (267)
290 3ua3_A Protein arginine N-meth 96.1 0.0012 4.2E-08 56.0 0.8 34 50-83 493-531 (745)
291 4auk_A Ribosomal RNA large sub 96.1 0.015 5.1E-07 45.8 6.7 61 18-79 210-296 (375)
292 3ufb_A Type I restriction-modi 96.1 0.017 5.9E-07 47.3 7.3 37 4-40 202-238 (530)
293 1m6e_X S-adenosyl-L-methionnin 95.9 0.0026 9E-08 49.8 1.8 21 20-40 52-72 (359)
294 2r6z_A UPF0341 protein in RSP 95.8 0.0032 1.1E-07 47.0 1.8 33 8-40 72-104 (258)
295 3pvc_A TRNA 5-methylaminomethy 95.7 0.017 6E-07 48.4 6.2 35 50-84 169-209 (689)
296 3r24_A NSP16, 2'-O-methyl tran 95.6 0.028 9.5E-07 43.2 6.3 65 19-85 109-216 (344)
297 3v97_A Ribosomal RNA large sub 95.2 0.045 1.5E-06 46.4 6.9 35 6-40 177-211 (703)
298 2oyr_A UPF0341 protein YHIQ; a 94.5 0.013 4.6E-07 43.7 1.8 32 9-40 76-109 (258)
299 3ll7_A Putative methyltransfer 93.2 0.044 1.5E-06 43.6 2.6 21 20-40 94-114 (410)
300 2zig_A TTHA0409, putative modi 92.6 0.51 1.8E-05 35.3 7.7 66 10-86 224-291 (297)
301 2vz8_A Fatty acid synthase; tr 92.6 0.086 3E-06 50.5 4.0 68 20-87 1241-1349(2512)
302 1f8f_A Benzyl alcohol dehydrog 92.3 0.18 6.2E-06 38.8 4.9 67 16-85 187-288 (371)
303 3iht_A S-adenosyl-L-methionine 92.2 1.3 4.4E-05 30.8 8.5 80 10-89 29-150 (174)
304 4ej6_A Putative zinc-binding d 92.1 0.57 2E-05 36.1 7.6 69 14-85 177-283 (370)
305 3fpc_A NADP-dependent alcohol 92.1 0.51 1.7E-05 36.0 7.2 70 14-86 161-266 (352)
306 1i4w_A Mitochondrial replicati 91.6 0.24 8.2E-06 38.6 4.9 38 4-41 37-80 (353)
307 1pqw_A Polyketide synthase; ro 91.3 0.19 6.6E-06 34.9 3.8 64 17-84 36-135 (198)
308 3ps9_A TRNA 5-methylaminomethy 91.1 0.42 1.4E-05 39.8 6.2 36 50-85 177-218 (676)
309 1pl8_A Human sorbitol dehydrog 90.6 2 6.8E-05 32.7 9.2 67 16-85 168-272 (356)
310 2dph_A Formaldehyde dismutase; 89.7 0.97 3.3E-05 35.1 6.9 70 15-84 181-297 (398)
311 3trk_A Nonstructural polyprote 89.6 0.34 1.2E-05 36.6 3.9 41 49-89 208-262 (324)
312 3s2e_A Zinc-containing alcohol 89.6 0.51 1.8E-05 35.7 5.1 67 16-85 163-262 (340)
313 4b7c_A Probable oxidoreductase 89.5 0.46 1.6E-05 35.9 4.7 67 15-85 145-247 (336)
314 3qwb_A Probable quinone oxidor 88.5 0.39 1.4E-05 36.3 3.7 65 17-85 146-246 (334)
315 1kol_A Formaldehyde dehydrogen 88.2 1.5 5E-05 34.0 6.9 70 16-85 182-299 (398)
316 3m6i_A L-arabinitol 4-dehydrog 88.0 2.9 9.9E-05 31.8 8.4 68 15-85 175-282 (363)
317 1g60_A Adenine-specific methyl 87.5 0.62 2.1E-05 34.2 4.2 36 50-85 21-73 (260)
318 3jyn_A Quinone oxidoreductase; 87.5 0.51 1.7E-05 35.6 3.8 65 17-85 138-238 (325)
319 3ip1_A Alcohol dehydrogenase, 87.5 1.6 5.3E-05 34.0 6.7 27 17-43 211-238 (404)
320 3gms_A Putative NADPH:quinone 87.3 0.81 2.8E-05 34.6 4.9 66 16-85 141-242 (340)
321 2c0c_A Zinc binding alcohol de 87.3 0.91 3.1E-05 34.8 5.2 68 14-85 158-260 (362)
322 4a2c_A Galactitol-1-phosphate 87.3 3 0.0001 31.4 8.0 70 15-87 156-261 (346)
323 2oo3_A Protein involved in cat 87.2 0.81 2.8E-05 34.6 4.7 75 8-84 81-196 (283)
324 3two_A Mannitol dehydrogenase; 87.2 1.8 6.2E-05 32.8 6.8 67 16-85 173-264 (348)
325 3uog_A Alcohol dehydrogenase; 87.0 0.35 1.2E-05 37.1 2.7 67 16-86 186-287 (363)
326 1e3j_A NADP(H)-dependent ketos 86.8 3.3 0.00011 31.4 8.0 68 15-85 164-270 (352)
327 4dcm_A Ribosomal RNA large sub 86.7 1.2 4E-05 34.7 5.5 75 11-85 30-135 (375)
328 3uko_A Alcohol dehydrogenase c 86.4 1.3 4.5E-05 34.0 5.7 68 16-86 190-295 (378)
329 1boo_A Protein (N-4 cytosine-s 86.1 0.9 3.1E-05 34.5 4.5 36 50-85 31-83 (323)
330 1v3u_A Leukotriene B4 12- hydr 85.8 0.85 2.9E-05 34.3 4.2 66 16-85 142-243 (333)
331 4eye_A Probable oxidoreductase 85.7 0.8 2.7E-05 34.8 4.1 66 16-85 156-256 (342)
332 1uuf_A YAHK, zinc-type alcohol 85.7 2.6 8.8E-05 32.4 7.0 66 16-84 191-286 (369)
333 1p0f_A NADP-dependent alcohol 85.3 1.6 5.3E-05 33.5 5.6 67 16-85 188-292 (373)
334 2jhf_A Alcohol dehydrogenase E 85.0 2.4 8.1E-05 32.4 6.5 67 16-85 188-292 (374)
335 1cdo_A Alcohol dehydrogenase; 84.8 1.7 5.9E-05 33.3 5.6 67 16-85 189-293 (374)
336 1qor_A Quinone oxidoreductase; 84.5 0.72 2.4E-05 34.7 3.2 65 17-85 138-238 (327)
337 1eg2_A Modification methylase 84.4 1 3.5E-05 34.3 4.1 36 50-85 56-105 (319)
338 2fzw_A Alcohol dehydrogenase c 83.2 2.5 8.6E-05 32.3 5.9 67 16-85 187-291 (373)
339 3jv7_A ADH-A; dehydrogenase, n 83.2 1.6 5.6E-05 33.0 4.8 66 16-85 168-269 (345)
340 4gua_A Non-structural polyprot 83.0 1.2 4.1E-05 37.0 4.1 40 50-89 219-272 (670)
341 1e3i_A Alcohol dehydrogenase, 82.9 2.5 8.4E-05 32.4 5.8 66 17-85 193-296 (376)
342 1wly_A CAAR, 2-haloacrylate re 82.3 1.1 3.6E-05 33.8 3.4 65 17-85 143-243 (333)
343 2zig_A TTHA0409, putative modi 82.2 1.5 5.1E-05 32.7 4.2 36 50-85 38-96 (297)
344 4dvj_A Putative zinc-dependent 82.2 3.6 0.00012 31.4 6.5 63 19-84 171-268 (363)
345 2d8a_A PH0655, probable L-thre 81.6 3.6 0.00012 31.1 6.2 64 19-85 167-266 (348)
346 1yb5_A Quinone oxidoreductase; 81.0 1.5 5E-05 33.5 3.8 66 16-85 167-268 (351)
347 4eez_A Alcohol dehydrogenase 1 80.8 11 0.00038 28.1 8.8 67 16-86 160-263 (348)
348 2zb4_A Prostaglandin reductase 80.7 2.7 9.1E-05 31.9 5.2 67 15-85 154-259 (357)
349 2j3h_A NADP-dependent oxidored 80.5 1.5 5.2E-05 33.1 3.7 65 16-84 152-253 (345)
350 1iz0_A Quinone oxidoreductase; 80.3 1.9 6.3E-05 32.0 4.1 63 17-84 123-216 (302)
351 2py6_A Methyltransferase FKBM; 79.5 1.4 4.9E-05 34.6 3.4 25 18-42 225-250 (409)
352 2eih_A Alcohol dehydrogenase; 79.4 1.1 3.9E-05 33.8 2.7 65 17-85 164-264 (343)
353 4dup_A Quinone oxidoreductase; 78.4 1.5 5E-05 33.4 3.1 66 16-85 164-264 (353)
354 2hcy_A Alcohol dehydrogenase 1 77.9 2.7 9.2E-05 31.8 4.4 66 17-85 167-268 (347)
355 3gqv_A Enoyl reductase; medium 77.6 5.9 0.0002 30.3 6.3 65 18-85 163-262 (371)
356 1jvb_A NAD(H)-dependent alcoho 77.5 1.8 6.3E-05 32.7 3.4 67 15-84 166-269 (347)
357 2hwk_A Helicase NSP2; rossman 76.9 2.3 8E-05 32.4 3.7 37 49-85 203-253 (320)
358 1rjw_A ADH-HT, alcohol dehydro 76.6 5.8 0.0002 29.8 6.0 67 16-85 161-260 (339)
359 1tt7_A YHFP; alcohol dehydroge 76.5 8.9 0.0003 28.5 7.0 60 22-85 153-246 (330)
360 2j8z_A Quinone oxidoreductase; 76.4 2.1 7.3E-05 32.5 3.5 65 17-85 160-260 (354)
361 3mag_A VP39; methylated adenin 76.0 14 0.00049 28.0 7.8 81 7-89 46-141 (307)
362 3tka_A Ribosomal RNA small sub 75.8 5.8 0.0002 30.8 5.7 29 18-46 56-84 (347)
363 3hwr_A 2-dehydropantoate 2-red 75.8 4.5 0.00015 30.3 5.1 34 51-84 85-118 (318)
364 3tqh_A Quinone oxidoreductase; 75.7 8.4 0.00029 28.6 6.6 67 15-85 148-244 (321)
365 3gaz_A Alcohol dehydrogenase s 75.0 3.1 0.00011 31.4 4.1 65 16-84 147-244 (343)
366 3nx4_A Putative oxidoreductase 73.8 5.5 0.00019 29.6 5.2 60 22-85 149-240 (324)
367 3fbg_A Putative arginate lyase 72.5 6.1 0.00021 29.8 5.2 63 19-84 150-246 (346)
368 1xa0_A Putative NADPH dependen 71.5 4.7 0.00016 30.1 4.3 60 22-85 152-245 (328)
369 2h6e_A ADH-4, D-arabinose 1-de 70.3 12 0.00041 28.1 6.4 66 16-85 168-268 (344)
370 1g60_A Adenine-specific methyl 70.2 4 0.00014 29.7 3.5 32 9-40 200-233 (260)
371 4a0s_A Octenoyl-COA reductase/ 69.7 8.9 0.0003 30.0 5.7 67 15-85 216-335 (447)
372 1piw_A Hypothetical zinc-type 69.0 4.2 0.00015 30.9 3.6 69 16-85 176-275 (360)
373 4a27_A Synaptic vesicle membra 68.8 3.1 0.00011 31.5 2.8 65 16-85 139-237 (349)
374 3krt_A Crotonyl COA reductase; 68.3 7.2 0.00024 30.7 4.9 66 16-85 225-343 (456)
375 2dq4_A L-threonine 3-dehydroge 67.8 8.9 0.0003 28.8 5.2 64 19-85 164-261 (343)
376 3ulk_A Ketol-acid reductoisome 66.5 7.1 0.00024 31.6 4.4 68 16-85 33-131 (491)
377 2km1_A Protein DRE2; yeast, an 65.7 4.7 0.00016 27.1 2.8 38 47-84 54-96 (136)
378 3slk_A Polyketide synthase ext 64.9 8.6 0.00029 32.9 5.0 65 16-84 342-440 (795)
379 1vj0_A Alcohol dehydrogenase, 63.8 15 0.00051 28.1 5.8 66 17-85 193-297 (380)
380 1y81_A Conserved hypothetical 63.7 13 0.00044 24.4 4.8 66 17-83 11-99 (138)
381 1wg8_A Predicted S-adenosylmet 63.5 5.3 0.00018 30.1 3.1 30 10-40 14-43 (285)
382 2f1k_A Prephenate dehydrogenas 63.3 9.6 0.00033 27.6 4.5 33 51-83 56-88 (279)
383 1zsy_A Mitochondrial 2-enoyl t 63.0 15 0.00051 27.7 5.7 27 16-42 164-192 (357)
384 2pv7_A T-protein [includes: ch 62.5 7.6 0.00026 28.8 3.8 61 21-83 22-96 (298)
385 4f3n_A Uncharacterized ACR, CO 61.7 7.5 0.00026 31.0 3.8 40 3-42 117-160 (432)
386 4e21_A 6-phosphogluconate dehy 60.8 11 0.00039 28.9 4.6 63 19-83 21-112 (358)
387 1yqd_A Sinapyl alcohol dehydro 60.2 15 0.00052 27.9 5.2 63 19-84 187-280 (366)
388 3dmg_A Probable ribosomal RNA 59.9 3.8 0.00013 31.9 1.8 68 19-86 45-139 (381)
389 3ggo_A Prephenate dehydrogenas 59.0 14 0.00049 27.6 4.8 32 52-83 94-125 (314)
390 2raf_A Putative dinucleotide-b 58.5 12 0.00042 26.1 4.2 62 19-83 18-87 (209)
391 3g2e_A OORC subunit of 2-oxogl 56.6 13 0.00045 25.9 4.0 33 51-88 69-101 (194)
392 3nbm_A PTS system, lactose-spe 56.4 4.1 0.00014 26.1 1.2 58 19-80 5-78 (108)
393 1zkd_A DUF185; NESG, RPR58, st 55.5 13 0.00043 29.2 4.1 40 3-42 57-103 (387)
394 2vn8_A Reticulon-4-interacting 55.1 13 0.00043 28.3 4.0 66 17-84 181-278 (375)
395 2cf5_A Atccad5, CAD, cinnamyl 52.7 22 0.00075 26.8 5.0 64 19-85 180-274 (357)
396 2duw_A Putative COA-binding pr 52.0 11 0.00037 25.0 2.8 64 19-83 12-100 (145)
397 1vpt_A VP39; RNA CAP, poly(A) 51.2 82 0.0028 24.3 7.9 80 7-88 61-155 (348)
398 3qha_A Putative oxidoreductase 42.4 23 0.00077 26.1 3.5 62 20-84 15-103 (296)
399 3fwz_A Inner membrane protein 42.2 34 0.0012 21.9 4.1 20 21-42 8-27 (140)
400 3k96_A Glycerol-3-phosphate de 41.1 27 0.00092 26.7 3.9 33 52-84 99-131 (356)
401 3on3_A Keto/oxoacid ferredoxin 40.3 29 0.001 23.8 3.7 32 52-88 70-101 (183)
402 2g1u_A Hypothetical protein TM 39.7 75 0.0026 20.5 5.6 22 18-41 17-38 (155)
403 3hn2_A 2-dehydropantoate 2-red 38.2 31 0.0011 25.5 3.7 34 51-84 68-101 (312)
404 3ojo_A CAP5O; rossmann fold, c 37.8 43 0.0015 26.5 4.7 39 52-90 83-133 (431)
405 2qyt_A 2-dehydropantoate 2-red 36.3 39 0.0013 24.5 4.0 34 51-84 82-115 (317)
406 1ny1_A Probable polysaccharide 35.3 58 0.002 23.2 4.7 46 66-129 180-225 (240)
407 1bg6_A N-(1-D-carboxylethyl)-L 34.4 52 0.0018 24.3 4.5 34 52-85 75-108 (359)
408 1lss_A TRK system potassium up 34.1 82 0.0028 19.3 5.4 32 51-82 68-99 (140)
409 2zpa_A Uncharacterized protein 33.7 37 0.0013 28.6 3.8 39 47-85 67-105 (671)
410 4e2x_A TCAB9; kijanose, tetron 33.3 1.6E+02 0.0054 22.3 7.3 76 9-85 307-409 (416)
411 3ego_A Probable 2-dehydropanto 33.2 92 0.0032 22.8 5.7 30 50-80 65-94 (307)
412 3g0o_A 3-hydroxyisobutyrate de 33.2 38 0.0013 24.8 3.5 62 20-83 7-99 (303)
413 4a7p_A UDP-glucose dehydrogena 32.5 1.2E+02 0.0041 24.0 6.4 37 52-88 84-131 (446)
414 2d59_A Hypothetical protein PH 32.3 71 0.0024 20.8 4.4 26 50-75 75-100 (144)
415 3g17_A Similar to 2-dehydropan 32.1 27 0.00093 25.5 2.5 34 51-84 61-94 (294)
416 3i83_A 2-dehydropantoate 2-red 30.8 29 0.001 25.7 2.5 34 51-84 70-103 (320)
417 2oq3_A Mannitol-specific crypt 30.0 2.5 8.6E-05 28.0 -3.3 29 54-82 13-41 (150)
418 3c85_A Putative glutathione-re 29.8 89 0.0031 20.6 4.7 34 51-84 104-137 (183)
419 3pef_A 6-phosphogluconate dehy 29.6 15 0.0005 26.9 0.6 33 52-84 57-93 (287)
420 1ks9_A KPA reductase;, 2-dehyd 29.2 54 0.0019 23.3 3.7 33 52-84 63-95 (291)
421 2ew2_A 2-dehydropantoate 2-red 28.9 54 0.0019 23.6 3.7 33 52-84 74-106 (316)
422 3pfi_A Holliday junction ATP-d 28.5 1.1E+02 0.0037 22.4 5.4 61 19-89 54-117 (338)
423 2j13_A Polysaccharide deacetyl 27.7 54 0.0018 23.5 3.4 44 68-129 194-237 (247)
424 2h78_A Hibadh, 3-hydroxyisobut 26.4 21 0.00073 26.1 1.0 34 51-84 58-95 (302)
425 3llv_A Exopolyphosphatase-rela 26.3 84 0.0029 19.7 3.9 21 20-42 6-26 (141)
426 1e2b_A Enzyme IIB-cellobiose; 26.1 3.7 0.00013 26.0 -2.8 65 21-89 4-84 (106)
427 1x0v_A GPD-C, GPDH-C, glycerol 25.4 74 0.0025 23.6 4.0 33 52-84 90-122 (354)
428 3bos_A Putative DNA replicatio 24.6 73 0.0025 21.5 3.6 30 7-36 39-69 (242)
429 1a4i_A Methylenetetrahydrofola 24.5 37 0.0013 25.7 2.0 60 19-83 164-234 (301)
430 2g5c_A Prephenate dehydrogenas 24.2 61 0.0021 23.2 3.2 32 52-83 62-93 (281)
431 3c7a_A Octopine dehydrogenase; 24.1 85 0.0029 23.9 4.1 33 52-84 82-114 (404)
432 3c24_A Putative oxidoreductase 23.3 62 0.0021 23.3 3.1 33 51-83 66-98 (286)
433 4fgw_A Glycerol-3-phosphate de 23.2 36 0.0012 26.6 1.9 32 52-83 117-148 (391)
434 1g55_A DNA cytosine methyltran 23.1 51 0.0017 24.9 2.6 22 20-41 2-23 (343)
435 3ghy_A Ketopantoate reductase 23.0 38 0.0013 25.3 1.9 34 51-84 69-102 (335)
436 1txg_A Glycerol-3-phosphate de 22.7 97 0.0033 22.6 4.1 33 51-84 70-102 (335)
437 3upu_A ATP-dependent DNA helic 22.4 2.7E+02 0.0093 21.5 7.5 33 51-83 127-159 (459)
438 3rht_A (gatase1)-like protein; 22.1 77 0.0026 23.2 3.4 34 51-84 49-84 (259)
439 2oqj_C Peptide 2G12.1 (ACPPSHV 22.1 30 0.001 15.7 0.7 13 19-31 3-15 (26)
440 1hru_A YRDC gene product; prot 22.0 1.1E+02 0.0039 20.9 4.1 30 67-96 8-37 (188)
441 2c71_A Glycoside hydrolase, fa 21.9 1.7E+02 0.0057 20.3 5.1 51 65-130 135-185 (216)
442 4e5v_A Putative THUA-like prot 21.6 84 0.0029 23.2 3.5 36 51-86 57-94 (281)
443 2izz_A Pyrroline-5-carboxylate 21.4 1E+02 0.0035 22.7 4.0 33 52-84 84-116 (322)
444 3d1l_A Putative NADP oxidoredu 21.2 84 0.0029 22.2 3.4 34 51-84 67-100 (266)
445 2rcy_A Pyrroline carboxylate r 20.9 81 0.0028 22.2 3.3 33 52-85 58-90 (262)
446 3fr7_A Putative ketol-acid red 20.8 78 0.0027 25.9 3.3 33 52-84 121-153 (525)
447 4dgs_A Dehydrogenase; structur 20.7 64 0.0022 24.6 2.8 63 19-83 170-255 (340)
448 3doj_A AT3G25530, dehydrogenas 20.4 31 0.001 25.5 0.9 64 19-84 20-113 (310)
449 3gt0_A Pyrroline-5-carboxylate 20.3 52 0.0018 23.2 2.1 32 52-83 63-94 (247)
450 2b5w_A Glucose dehydrogenase; 20.2 98 0.0034 23.1 3.7 68 15-85 162-272 (357)
451 1iuk_A Hypothetical protein TT 20.1 68 0.0023 20.8 2.5 33 50-83 68-100 (140)
No 1
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.96 E-value=4.4e-29 Score=187.11 Aligned_cols=136 Identities=41% Similarity=0.706 Sum_probs=120.0
Q ss_pred CCcChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------
Q 032292 1 MLLLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------------------- 46 (143)
Q Consensus 1 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------------------- 46 (143)
|+++++++++|..++...++++|||||||+|++|+++|+.++++++
T Consensus 42 ~~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda 121 (242)
T 3r3h_A 42 MQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPA 121 (242)
T ss_dssp TSCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCH
T ss_pred CccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 5689999999999999999999999999999999999998864333
Q ss_pred ----cCC-----CCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEeccCCCccccCCCCCCCCCcccchHHHHHHHHH
Q 032292 47 ----SEN-----EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNR 117 (143)
Q Consensus 47 ----~~~-----~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~f~~ 117 (143)
+.. .++||+||+|+.+.+|..+++.+.++|+|||+|++||++|.|.+.++....+ ...++++|++
T Consensus 122 ~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~------~~~~~~~~~~ 195 (242)
T 3r3h_A 122 LDTLHSLLNEGGEHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSG------QTREIKKLNQ 195 (242)
T ss_dssp HHHHHHHHHHHCSSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCH------HHHHHHHHHH
T ss_pred HHHHHHHhhccCCCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEECCccCCcccCccccCh------HHHHHHHHHH
Confidence 111 4789999999999999999999999999999999999999998887643211 4568999999
Q ss_pred HhhcCCCeeEEEeecCCeeEEEEEc
Q 032292 118 SLADDPRVQLSHVALGDGITICRRI 142 (143)
Q Consensus 118 ~l~~~~~~~~~~lp~~~Gl~~~~k~ 142 (143)
.+.++++|+++++|++||+++++||
T Consensus 196 ~l~~~~~~~~~~lp~~dG~~~~~k~ 220 (242)
T 3r3h_A 196 VIKNDSRVFVSLLAIADGMFLVQPI 220 (242)
T ss_dssp HHHTCCSEEEEEESSSSCEEEEEEC
T ss_pred HHhhCCCEEEEEEEccCceEEEEEc
Confidence 9999999999999999999999986
No 2
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.96 E-value=1.2e-28 Score=182.67 Aligned_cols=135 Identities=21% Similarity=0.273 Sum_probs=118.3
Q ss_pred CcChHHHHHHHHHHhhcCCC---EEEEEeccccHHHHHHHhhCCCCCc--------------------------------
Q 032292 2 LLLTIHGQLMAMLLRLVNAK---KTIEIGVFTGYSLLLTALTIPEDGQ-------------------------------- 46 (143)
Q Consensus 2 ~~~~~~~~~l~~l~~~~~~~---~vLeiG~g~G~~t~~la~~~~~~~~-------------------------------- 46 (143)
.+++.++++|..++...+++ +|||||||+|+++++||++++++++
T Consensus 36 ~i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~ 115 (221)
T 3dr5_A 36 APDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLL 115 (221)
T ss_dssp CCCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred CCCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEE
Confidence 46899999999999998888 9999999999999999998865443
Q ss_pred -------cCC-CCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEeccCCCccccCCCCCCCCCcccchHHHHHHHHHH
Q 032292 47 -------SEN-EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRS 118 (143)
Q Consensus 47 -------~~~-~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~f~~~ 118 (143)
+.. .++||+||+|+++.+|..+++.+.++|+|||++++||++|.|.+.+++... ....++++|++.
T Consensus 116 gda~~~l~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~------~~~~~~~~~~~~ 189 (221)
T 3dr5_A 116 SRPLDVMSRLANDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLADALLDGTIADQTRKD------RDTQAARDADEY 189 (221)
T ss_dssp SCHHHHGGGSCTTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCC------HHHHHHHHHHHH
T ss_pred cCHHHHHHHhcCCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCC------hHHHHHHHHHHH
Confidence 112 578999999999999999999999999999999999999999988764221 145679999999
Q ss_pred hhcCCCeeEEEeecCCeeEEEEEc
Q 032292 119 LADDPRVQLSHVALGDGITICRRI 142 (143)
Q Consensus 119 l~~~~~~~~~~lp~~~Gl~~~~k~ 142 (143)
+.++|+++++++|+|+|+++++|-
T Consensus 190 l~~~~~~~~~~lp~gdGl~~~~~~ 213 (221)
T 3dr5_A 190 IRSIEGAHVARLPLGAGLTVVTKA 213 (221)
T ss_dssp HTTCTTEEEEEESSTTCEEEEEEC
T ss_pred HhhCCCeeEEEeeccchHHHHHHH
Confidence 999999999999999999999973
No 3
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.96 E-value=1.1e-28 Score=184.19 Aligned_cols=142 Identities=65% Similarity=1.149 Sum_probs=123.1
Q ss_pred CCcChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------
Q 032292 1 MLLLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------------------- 46 (143)
Q Consensus 1 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------------------- 46 (143)
|++++++++++..++...++++|||||||+|++++++|+.++++++
T Consensus 52 ~~~~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda 131 (237)
T 3c3y_A 52 MSTSPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDA 131 (237)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred CCcCHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 4678999999999999999999999999999999999999875443
Q ss_pred ----cC------CCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEeccCCCccccCCCCCCCCCcccchHHHHHHHH
Q 032292 47 ----SE------NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLN 116 (143)
Q Consensus 47 ----~~------~~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~f~ 116 (143)
+. ..++||+||+|+++.+|..+++.+.++|+|||+|++||++|.|.+.++....+...++ ....+++|+
T Consensus 132 ~~~l~~l~~~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~~~~~g~~~~~~~~~~~~~r~-~~~~i~~~~ 210 (237)
T 3c3y_A 132 MLALDNLLQGQESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDNTLWGGTVAQPESEVPDFMKE-NREAVIELN 210 (237)
T ss_dssp HHHHHHHHHSTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECTTGGGGGGSCGGGSCGGGHH-HHHHHHHHH
T ss_pred HHHHHHHHhccCCCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEecCCcCCccCCCcccchhhHHH-HHHHHHHHH
Confidence 11 1478999999999999999999999999999999999999999988764333333443 567899999
Q ss_pred HHhhcCCCeeEEEeecCCeeEEEEEcC
Q 032292 117 RSLADDPRVQLSHVALGDGITICRRIF 143 (143)
Q Consensus 117 ~~l~~~~~~~~~~lp~~~Gl~~~~k~~ 143 (143)
+.+.+++++.++++|++||+++++|++
T Consensus 211 ~~l~~~~~~~~~~lp~~dG~~~~~~~~ 237 (237)
T 3c3y_A 211 KLLAADPRIEIVHLPLGDGITFCRRLY 237 (237)
T ss_dssp HHHHHCTTEEEEEECSTTCEEEEEECC
T ss_pred HHHhcCCCeEEEEEEeCCceEEEEEcC
Confidence 999999999999999999999999974
No 4
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.96 E-value=2.1e-28 Score=183.93 Aligned_cols=142 Identities=57% Similarity=0.986 Sum_probs=122.2
Q ss_pred CCcChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------
Q 032292 1 MLLLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------------------- 46 (143)
Q Consensus 1 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------------------- 46 (143)
|++++++++++..++...++++|||||||+|++++++|+.++++++
T Consensus 61 ~~~~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda 140 (247)
T 1sui_A 61 MTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPA 140 (247)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred CCcCHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH
Confidence 4688999999999999989999999999999999999999875433
Q ss_pred ----cCC------CCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEeccCCCccccCCCCCCCCCc-ccchHHHHHHH
Q 032292 47 ----SEN------EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHF-RGSSRQAILDL 115 (143)
Q Consensus 47 ----~~~------~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~f 115 (143)
+.. .++||+||+|+++.+|..+++.+.++|+|||+|++||++|.|.+.+++...+... ++ ...++++|
T Consensus 141 ~~~l~~l~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~-~~~~i~~~ 219 (247)
T 1sui_A 141 LPVLDEMIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRY-YRDFVLEL 219 (247)
T ss_dssp HHHHHHHHHSGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEECTTGGGGGGCCTTSCCCHHHHH-HHHHHHHH
T ss_pred HHHHHHHHhccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEecCCcCCcccCCCccchhhhhhH-HHHHHHHH
Confidence 111 4789999999999899999999999999999999999999999988754333211 22 45689999
Q ss_pred HHHhhcCCCeeEEEeecCCeeEEEEEcC
Q 032292 116 NRSLADDPRVQLSHVALGDGITICRRIF 143 (143)
Q Consensus 116 ~~~l~~~~~~~~~~lp~~~Gl~~~~k~~ 143 (143)
++.+..++++.++++|++||+++++|+.
T Consensus 220 ~~~l~~~~~~~~~~lp~~dG~~l~~k~~ 247 (247)
T 1sui_A 220 NKALAVDPRIEICMLPVGDGITICRRIK 247 (247)
T ss_dssp HHHHHTCTTBCCEEECSTTCEEEECBCC
T ss_pred HHHHhhCCCeEEEEEecCCccEEEEEcC
Confidence 9999999999999999999999999874
No 5
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.95 E-value=1.1e-26 Score=172.55 Aligned_cols=136 Identities=43% Similarity=0.723 Sum_probs=119.0
Q ss_pred CCcChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------
Q 032292 1 MLLLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------------------- 46 (143)
Q Consensus 1 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------------------- 46 (143)
|++++.+++++..++...++++|||||||+|++++++++.++++++
T Consensus 54 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~ 133 (232)
T 3cbg_A 54 MQISPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPA 133 (232)
T ss_dssp GSCCHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH
T ss_pred cCcCHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 5689999999999999889999999999999999999998874333
Q ss_pred -------cCCC--CceeEEEEcCCccchHHHHHHHHhcccCCeEEEEeccCCCccccCCCCCCCCCcccchHHHHHHHHH
Q 032292 47 -------SENE--GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNR 117 (143)
Q Consensus 47 -------~~~~--~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~f~~ 117 (143)
+... ++||+||+|+.+.+|..+++.+.++|+|||+|+++|++|.|.+.++.... . ....+++|++
T Consensus 134 ~~~l~~l~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~-----~-~~~~~~~~~~ 207 (232)
T 3cbg_A 134 LATLEQLTQGKPLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQE-----A-QTQVLQQFNR 207 (232)
T ss_dssp HHHHHHHHTSSSCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCCS-----H-HHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccCC-----h-HHHHHHHHHH
Confidence 0011 78999999999889999999999999999999999999999988764221 1 5678999999
Q ss_pred HhhcCCCeeEEEeecCCeeEEEEEc
Q 032292 118 SLADDPRVQLSHVALGDGITICRRI 142 (143)
Q Consensus 118 ~l~~~~~~~~~~lp~~~Gl~~~~k~ 142 (143)
.+.+++++.++++|+++|+++++|+
T Consensus 208 ~l~~~~~~~~~~lp~~dG~~~~~~~ 232 (232)
T 3cbg_A 208 DLAQDERVRISVIPLGDGMTLALKK 232 (232)
T ss_dssp HHTTCTTEEEEEECSBTCEEEEEEC
T ss_pred HHhhCCCeEEEEEEcCCeEEEEEeC
Confidence 9999999999999999999999985
No 6
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.94 E-value=2.3e-26 Score=168.87 Aligned_cols=137 Identities=39% Similarity=0.604 Sum_probs=119.0
Q ss_pred CCcChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------
Q 032292 1 MLLLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------------------- 46 (143)
Q Consensus 1 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------------------- 46 (143)
|++++..++++..++...++++|||||||+|++++++++.+++.++
T Consensus 46 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 125 (225)
T 3tr6_A 46 MQTAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPA 125 (225)
T ss_dssp GSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCH
Confidence 4578999999999999989999999999999999999998874333
Q ss_pred ----cCCC-----CceeEEEEcCCccchHHHHHHHHhcccCCeEEEEeccCCCccccCCCCCCCCCcccchHHHHHHHHH
Q 032292 47 ----SENE-----GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNR 117 (143)
Q Consensus 47 ----~~~~-----~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~f~~ 117 (143)
+... ++||+||+|+....+..+++.+.++|+|||+++++|++|.|.+..++...+ ...++++|++
T Consensus 126 ~~~~~~~~~~~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~------~~~~~~~~~~ 199 (225)
T 3tr6_A 126 KDTLAELIHAGQAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQSE------NNQLIRLFNQ 199 (225)
T ss_dssp HHHHHHHHTTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCH------HHHHHHHHHH
T ss_pred HHHHHHhhhccCCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccCh------HHHHHHHHHH
Confidence 0111 789999999998889999999999999999999999999998887643211 4568999999
Q ss_pred HhhcCCCeeEEEeecCCeeEEEEEcC
Q 032292 118 SLADDPRVQLSHVALGDGITICRRIF 143 (143)
Q Consensus 118 ~l~~~~~~~~~~lp~~~Gl~~~~k~~ 143 (143)
.+..+++++++++|+++|+++++|+.
T Consensus 200 ~l~~~~~~~~~~lp~~dG~~~~~k~~ 225 (225)
T 3tr6_A 200 KVYKDERVDMILIPIGDGLTLARKKS 225 (225)
T ss_dssp HHHHCTTEEEEEECSTTCEEEEEECC
T ss_pred HHhcCCCeEEEEEEcCCccEEEEECC
Confidence 99999999999999999999999973
No 7
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.94 E-value=3.6e-26 Score=169.68 Aligned_cols=138 Identities=26% Similarity=0.357 Sum_probs=118.5
Q ss_pred cChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------------
Q 032292 3 LLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------ 46 (143)
Q Consensus 3 ~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------ 46 (143)
+.++.++++..++...++++|||||||+|++++++|+..+. ++
T Consensus 55 ~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 133 (232)
T 3ntv_A 55 VDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISDD-IHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALE 133 (232)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCTT-CEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGG
T ss_pred cCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHH
Confidence 57889999999999989999999999999999999996542 22
Q ss_pred --c-CCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEeccCCCccccCCCCCCCCCcccchHHHHHHHHHHhhcCC
Q 032292 47 --S-ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDP 123 (143)
Q Consensus 47 --~-~~~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~~~ 123 (143)
+ ...++||+||+++....+..+++.+.++|+|||++++||++|.|.+.+++...+++.+. ...++++|++.+..++
T Consensus 134 ~~~~~~~~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d~~~~~g~v~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~ 212 (232)
T 3ntv_A 134 QFENVNDKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIGIVRSRNVRQ-MVKKVQDYNEWLIKQP 212 (232)
T ss_dssp CHHHHTTSCEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEECTTGGGGGGCGGGGGCHHHHH-HHHHHHHHHHHHHTCT
T ss_pred HHHhhccCCccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEeeCCcCccccCcccccchhhhH-HHHHHHHHHHHHhcCC
Confidence 1 22578999999999999999999999999999999999999999988765422332333 5568999999999999
Q ss_pred CeeEEEeecCCeeEEEEEc
Q 032292 124 RVQLSHVALGDGITICRRI 142 (143)
Q Consensus 124 ~~~~~~lp~~~Gl~~~~k~ 142 (143)
+++++++|+++|+.+++||
T Consensus 213 ~~~~~~lp~~dG~~i~~k~ 231 (232)
T 3ntv_A 213 GYTTNFLNIDDGLAISIKG 231 (232)
T ss_dssp TEEEEEECSTTCEEEEEEC
T ss_pred CeEEEEEEcCCceEEEEEC
Confidence 9999999999999999986
No 8
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.94 E-value=1.7e-25 Score=164.21 Aligned_cols=137 Identities=28% Similarity=0.440 Sum_probs=118.4
Q ss_pred CCcChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------
Q 032292 1 MLLLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------------------- 46 (143)
Q Consensus 1 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------------------- 46 (143)
|++++..++++..++...++++|||||||+|++++++|+.+++.++
T Consensus 40 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 119 (223)
T 3duw_A 40 HDVSPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLA 119 (223)
T ss_dssp CSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 4578999999999999999999999999999999999999874333
Q ss_pred ----c----CCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEeccCCCccccCCCCCCCCCcccchHHHHHHHHHH
Q 032292 47 ----S----ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRS 118 (143)
Q Consensus 47 ----~----~~~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~f~~~ 118 (143)
+ ...++||+||+|+....+..+++.+.++|+|||+++++|++|.|.+.++....+ ....+++|++.
T Consensus 120 ~~~~~~~~~~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~------~~~~~~~~~~~ 193 (223)
T 3duw_A 120 LDSLQQIENEKYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSNDP------RVQGIRRFYEL 193 (223)
T ss_dssp HHHHHHHHHTTCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCCH------HHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccch------HHHHHHHHHHH
Confidence 0 001579999999998899999999999999999999999999998887643211 55679999999
Q ss_pred hhcCCCeeEEEeec-----CCeeEEEEEcC
Q 032292 119 LADDPRVQLSHVAL-----GDGITICRRIF 143 (143)
Q Consensus 119 l~~~~~~~~~~lp~-----~~Gl~~~~k~~ 143 (143)
+..+++++++++|+ +||+.++++|.
T Consensus 194 l~~~~~~~~~~~p~~~~~~~dG~~~~~~~~ 223 (223)
T 3duw_A 194 IAAEPRVSATALQTVGSKGYDGFIMAVVKE 223 (223)
T ss_dssp HHHCTTEEEEEEEEEETTEEEEEEEEEEC-
T ss_pred HhhCCCeEEEEEeccCCCCCCeeEEEEEeC
Confidence 99999999999999 99999999863
No 9
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.94 E-value=2.7e-25 Score=166.71 Aligned_cols=136 Identities=30% Similarity=0.503 Sum_probs=117.8
Q ss_pred CCcChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------
Q 032292 1 MLLLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------------------- 46 (143)
Q Consensus 1 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------------------- 46 (143)
|++++..++++..++...++++|||||||+|++++++|+.+++.++
T Consensus 45 ~~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~ 124 (248)
T 3tfw_A 45 HDVAANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPA 124 (248)
T ss_dssp CCCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred cccCHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 4678999999999999989999999999999999999999874333
Q ss_pred ----cCC--CCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEeccCCCccccCCCCCCCCCcccchHHHHHHHHHHhh
Q 032292 47 ----SEN--EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLA 120 (143)
Q Consensus 47 ----~~~--~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~f~~~l~ 120 (143)
+.. .++||+||+|+....+..+++.+.++|+|||+|+++|++|.|.+.++.... . ....+++|++.+.
T Consensus 125 ~~~l~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~-----~-~~~~~~~~~~~l~ 198 (248)
T 3tfw_A 125 LQSLESLGECPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSAD-----E-RVQGVRQFIEMMG 198 (248)
T ss_dssp HHHHHTCCSCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCC-----H-HHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccccc-----h-HHHHHHHHHHHHh
Confidence 112 348999999999989999999999999999999999999999988764321 1 5678999999999
Q ss_pred cCCCeeEEEe-ecC----CeeEEEEEc
Q 032292 121 DDPRVQLSHV-ALG----DGITICRRI 142 (143)
Q Consensus 121 ~~~~~~~~~l-p~~----~Gl~~~~k~ 142 (143)
.+++|+++++ |++ ||+++++||
T Consensus 199 ~~~~~~~~~l~~~g~~~~DG~~i~~~~ 225 (248)
T 3tfw_A 199 AEPRLTATALQTVGTKGWDGFTLAWVN 225 (248)
T ss_dssp HCTTEEEEEEEECSTTCSEEEEEEEEC
T ss_pred hCCCEEEEEeecCCCCCCCeeEEEEEe
Confidence 9999999988 776 999999986
No 10
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.93 E-value=2.1e-25 Score=164.10 Aligned_cols=136 Identities=42% Similarity=0.688 Sum_probs=117.5
Q ss_pred CCcChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------
Q 032292 1 MLLLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------------------- 46 (143)
Q Consensus 1 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------------------- 46 (143)
|.+++.+++++..++...++++|||||||+|++++++++.+++.++
T Consensus 51 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~ 130 (229)
T 2avd_A 51 SMMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPA 130 (229)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred CccCHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCH
Confidence 4578899999999999999999999999999999999998764332
Q ss_pred ----cCC--C---CceeEEEEcCCccchHHHHHHHHhcccCCeEEEEeccCCCccccCCCCCCCCCcccchHHHHHHHHH
Q 032292 47 ----SEN--E---GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNR 117 (143)
Q Consensus 47 ----~~~--~---~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~f~~ 117 (143)
+.. . ++||+||+|.....|..+++.+.++|+|||+++++|++|.|.+.++.... . ....+++|++
T Consensus 131 ~~~~~~~~~~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~-----~-~~~~~~~~~~ 204 (229)
T 2avd_A 131 LETLDELLAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGD-----V-AAECVRNLNE 204 (229)
T ss_dssp HHHHHHHHHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTTC-----H-HHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECCCcCCcccCcccCC-----h-HHHHHHHHHH
Confidence 000 1 68999999998888999999999999999999999999999987653221 1 5678999999
Q ss_pred HhhcCCCeeEEEeecCCeeEEEEEc
Q 032292 118 SLADDPRVQLSHVALGDGITICRRI 142 (143)
Q Consensus 118 ~l~~~~~~~~~~lp~~~Gl~~~~k~ 142 (143)
.+..++++.++++|+++|+++++|+
T Consensus 205 ~l~~~~~~~~~~lp~~dGl~~~~k~ 229 (229)
T 2avd_A 205 RIRRDVRVYISLLPLGDGLTLAFKI 229 (229)
T ss_dssp HHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred HHhhCCCEEEEEEecCCceEEEEEC
Confidence 9999999999999999999999985
No 11
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.91 E-value=1.1e-23 Score=156.46 Aligned_cols=136 Identities=41% Similarity=0.652 Sum_probs=117.6
Q ss_pred CCcChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------
Q 032292 1 MLLLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------------------- 46 (143)
Q Consensus 1 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------------------- 46 (143)
|+++|..++++..++...++++|||||||+|+++.++++.+++.++
T Consensus 42 ~~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~ 121 (239)
T 2hnk_A 42 MQISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSA 121 (239)
T ss_dssp CSCCHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCH
Confidence 4688999999999999889999999999999999999999764332
Q ss_pred ----cCC---------------C-CceeEEEEcCCccchHHHHHHHHhcccCCeEEEEeccCCCccccCCCCCCCCCccc
Q 032292 47 ----SEN---------------E-GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRG 106 (143)
Q Consensus 47 ----~~~---------------~-~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~~~~~g~~~~~~~~~~~~~~~ 106 (143)
+.. . ++||+||+++...++..+++.+.++|+|||++++++++|.|.+.++... ..
T Consensus 122 ~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~-----~~ 196 (239)
T 2hnk_A 122 LETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQ-----EP 196 (239)
T ss_dssp HHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCC-----CH
T ss_pred HHHHHHHHhhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEccccCCcccCcccc-----ch
Confidence 000 2 7899999999888899999999999999999999999999988765422 11
Q ss_pred chHHHHHHHHHHhhcCCCeeEEEeecCCeeEEEEEc
Q 032292 107 SSRQAILDLNRSLADDPRVQLSHVALGDGITICRRI 142 (143)
Q Consensus 107 ~~~~~~~~f~~~l~~~~~~~~~~lp~~~Gl~~~~k~ 142 (143)
....+++|++.+..++++.++++|+++|+.+++|+
T Consensus 197 -~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~ 231 (239)
T 2hnk_A 197 -STVGIRKFNELVYNDSLVDVSLVPIADGVSLVRKR 231 (239)
T ss_dssp -HHHHHHHHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred -HHHHHHHHHHHHhhCCCeEEEEEEcCCceEeeeeh
Confidence 56679999999999999999999999999999986
No 12
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.91 E-value=1.2e-23 Score=153.36 Aligned_cols=133 Identities=21% Similarity=0.285 Sum_probs=108.3
Q ss_pred CcChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------
Q 032292 2 LLLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------- 46 (143)
Q Consensus 2 ~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------- 46 (143)
.+++.++.++..++...++++|||||||+|++++++++.+++.++
T Consensus 39 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 118 (210)
T 3c3p_A 39 IVDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPL 118 (210)
T ss_dssp CCCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHH
T ss_pred CcCHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHH
Confidence 367889999999988888999999999999999999998764332
Q ss_pred ---cCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEeccCCCccccCCCCCCCCCcccchHHHHHHHHHHhhcCC
Q 032292 47 ---SENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDP 123 (143)
Q Consensus 47 ---~~~~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~~~ 123 (143)
+...+ ||+||+|+...++..+++.+.++|+|||+++++|++|.|.+.++ .. .+ ....+++|++.+..++
T Consensus 119 ~~~~~~~~-fD~v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~-~~-~~-----~~~~~~~~~~~l~~~~ 190 (210)
T 3c3p_A 119 GIAAGQRD-IDILFMDCDVFNGADVLERMNRCLAKNALLIAVNALRRGSVAES-HE-DP-----ETAALREFNHHLSRRR 190 (210)
T ss_dssp HHHTTCCS-EEEEEEETTTSCHHHHHHHHGGGEEEEEEEEEESSSSCC-------------------CCCHHHHHHTTCT
T ss_pred HHhccCCC-CCEEEEcCChhhhHHHHHHHHHhcCCCeEEEEECccccCcccCc-cc-ch-----HHHHHHHHHHHHhhCC
Confidence 22345 99999999888999999999999999999999999999887643 11 11 3345899999999999
Q ss_pred CeeEEEeecCCeeEEEEEc
Q 032292 124 RVQLSHVALGDGITICRRI 142 (143)
Q Consensus 124 ~~~~~~lp~~~Gl~~~~k~ 142 (143)
++.++++|+++|+.+++|+
T Consensus 191 ~~~~~~~p~~~G~~~~~~~ 209 (210)
T 3c3p_A 191 DFFTTIVPVGNGVLLGYRL 209 (210)
T ss_dssp TEEEEEECSTTCEEEEEEC
T ss_pred CeEEEEEecCCceEEEEeC
Confidence 9999999999999999987
No 13
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.88 E-value=9e-22 Score=144.61 Aligned_cols=121 Identities=23% Similarity=0.353 Sum_probs=102.0
Q ss_pred CCcChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------
Q 032292 1 MLLLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------------------- 46 (143)
Q Consensus 1 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------------------- 46 (143)
|+++++.++++..++...++++|||||||+|++++++|+.+++.++
T Consensus 40 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 119 (221)
T 3u81_A 40 MNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGAS 119 (221)
T ss_dssp GGCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCH
Confidence 4688999999999999999999999999999999999998764443
Q ss_pred ----cCCC-----CceeEEEEcCCccchHHH---HHHHHhcccCCeEEEEeccCCCccccCCCCCCCCCcccchHHHHHH
Q 032292 47 ----SENE-----GSFDYAFVDADKDNYCNY---HERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILD 114 (143)
Q Consensus 47 ----~~~~-----~~fD~v~~d~~~~~~~~~---~~~~~~~L~~gG~li~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 114 (143)
+... ++||+||+|+....|... ++.+ ++|+|||+++++|+.+.+ .++
T Consensus 120 ~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~~~--------------------~~~ 178 (221)
T 3u81_A 120 QDLIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIVPG--------------------TPD 178 (221)
T ss_dssp HHHGGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCCCC--------------------CHH
T ss_pred HHHHHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCCcc--------------------hHH
Confidence 1122 689999999988777754 4444 999999999999998753 367
Q ss_pred HHHHhhcCCCeeEEEee-------cCCeeEEEEEc
Q 032292 115 LNRSLADDPRVQLSHVA-------LGDGITICRRI 142 (143)
Q Consensus 115 f~~~l~~~~~~~~~~lp-------~~~Gl~~~~k~ 142 (143)
|++.+.++++|+++++| .++|+.+++++
T Consensus 179 ~~~~l~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~ 213 (221)
T 3u81_A 179 FLAYVRGSSSFECTHYSSYLEYMKVVDGLEKAIYQ 213 (221)
T ss_dssp HHHHHHHCTTEEEEEEEEEETTTTEEEEEEEEEEC
T ss_pred HHHHHhhCCCceEEEcccccccCCCCCceEEEEEe
Confidence 88888899999999999 79999999975
No 14
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.87 E-value=5.1e-22 Score=146.72 Aligned_cols=139 Identities=25% Similarity=0.405 Sum_probs=100.4
Q ss_pred CcChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------
Q 032292 2 LLLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------- 46 (143)
Q Consensus 2 ~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------- 46 (143)
.+.+..++++..++...++.+|||||||+|++++++++.++. ++
T Consensus 37 ~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 115 (233)
T 2gpy_A 37 IMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALPE-ATIVSIERDERRYEEAHKHVKALGLESRIELLFGDAL 115 (233)
T ss_dssp CCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTT-CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGG
T ss_pred CcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHH
Confidence 367889999999998889999999999999999999998752 22
Q ss_pred ---cCC--CCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEeccCCCccccCCCCCCCCCcccchHHHHHHHHHHhhc
Q 032292 47 ---SEN--EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLAD 121 (143)
Q Consensus 47 ---~~~--~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~ 121 (143)
+.. .++||+|+++.....+..+++.+.++|+|||+++++|++|.|.+..++. .+++.+. ....+++|+..+..
T Consensus 116 ~~~~~~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~-~~~~~~~-~~~~~~~~~~~l~~ 193 (233)
T 2gpy_A 116 QLGEKLELYPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDNVLFRGLVAETDI-EHKRHKQ-LATKIDTYNQWLLE 193 (233)
T ss_dssp GSHHHHTTSCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEETTTC---------------------------CTTTT
T ss_pred HHHHhcccCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEcCCcCCccCCccc-cccchhH-HHHHHHHHHHHHHh
Confidence 001 4689999999887888999999999999999999999999987765432 1112211 34568899999999
Q ss_pred CCCeeEEEeecCCeeEEEEEcC
Q 032292 122 DPRVQLSHVALGDGITICRRIF 143 (143)
Q Consensus 122 ~~~~~~~~lp~~~Gl~~~~k~~ 143 (143)
++.+.++++|+++|+.+++|++
T Consensus 194 ~~~~~~~~~p~~dG~~~~~~~~ 215 (233)
T 2gpy_A 194 HPQYDTRIFPVGDGIAISIKRE 215 (233)
T ss_dssp CTTEEEEEECSTTCEEEEEEC-
T ss_pred CCCeEEEEEEcCCeEEEEEEcC
Confidence 9999999999999999999863
No 15
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.62 E-value=8.8e-16 Score=112.25 Aligned_cols=106 Identities=12% Similarity=0.034 Sum_probs=79.1
Q ss_pred CCcChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------
Q 032292 1 MLLLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------------------- 46 (143)
Q Consensus 1 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------------------- 46 (143)
+.+++++++||.. .+.++++|||||| ||||+|||+.. +++
T Consensus 14 ~~v~~~~~~~L~~--~l~~a~~VLEiGt--GySTl~lA~~~--~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~g 87 (202)
T 3cvo_A 14 LTMPPAEAEALRM--AYEEAEVILEYGS--GGSTVVAAELP--GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWT 87 (202)
T ss_dssp CCSCHHHHHHHHH--HHHHCSEEEEESC--SHHHHHHHTST--TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEEC
T ss_pred ccCCHHHHHHHHH--HhhCCCEEEEECc--hHHHHHHHHcC--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEe
Confidence 3578999999998 4458999999998 69999999852 233
Q ss_pred c---C------------------------C--CCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEeccCCCccccCCC
Q 032292 47 S---E------------------------N--EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPE 97 (143)
Q Consensus 47 ~---~------------------------~--~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~~~~~g~~~~~~ 97 (143)
+ . . .++||+||+|+++. ..++..++++|+|||+|++||+.+...
T Consensus 88 da~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~--~~~~~~~l~~l~~GG~Iv~DNv~~r~~----- 160 (202)
T 3cvo_A 88 DIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFR--VGCALATAFSITRPVTLLFDDYSQRRW----- 160 (202)
T ss_dssp CCSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSH--HHHHHHHHHHCSSCEEEEETTGGGCSS-----
T ss_pred CchhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCCc--hhHHHHHHHhcCCCeEEEEeCCcCCcc-----
Confidence 1 1 1 26799999999876 367778889999999999999765421
Q ss_pred CCCCCCcccchHHHHHHHHHHhhcCCCeeEEEe
Q 032292 98 EQVPDHFRGSSRQAILDLNRSLADDPRVQLSHV 130 (143)
Q Consensus 98 ~~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~l 130 (143)
+..+.+|...+...++.-.+.+
T Consensus 161 -----------y~~v~~~~~~~~~~~~~a~f~~ 182 (202)
T 3cvo_A 161 -----------QHQVEEFLGAPLMIGRLAAFQV 182 (202)
T ss_dssp -----------GGGGHHHHCCCEEETTEEEEEE
T ss_pred -----------hHHHHHHHhHHhhcCceEEEEe
Confidence 1236888877776666544433
No 16
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=99.58 E-value=7.6e-15 Score=112.25 Aligned_cols=120 Identities=13% Similarity=0.167 Sum_probs=90.3
Q ss_pred CcChHHHHHHHHHHhh----cCCCEEEEEeccccHHHHHHHhhCC-----C------C----------------------
Q 032292 2 LLLTIHGQLMAMLLRL----VNAKKTIEIGVFTGYSLLLTALTIP-----E------D---------------------- 44 (143)
Q Consensus 2 ~~~~~~~~~l~~l~~~----~~~~~vLeiG~g~G~~t~~la~~~~-----~------~---------------------- 44 (143)
+++++.+.+|+.+++. ..|++|||+||+.|+|+++||+.++ . +
T Consensus 85 mv~~~r~~~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~ 164 (282)
T 2wk1_A 85 MIGIKRLENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALH 164 (282)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGG
T ss_pred ccCHHHHHHHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccc
Confidence 3567888888888875 4589999999999999999986642 1 0
Q ss_pred ------------------------Cc------------cC-CCCceeEEEEcCCc-cchHHHHHHHHhcccCCeEEEEec
Q 032292 45 ------------------------GQ------------SE-NEGSFDYAFVDADK-DNYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 45 ------------------------~~------------~~-~~~~fD~v~~d~~~-~~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
.+ +. ..++||+||+|+++ ..+..+++.+.++|+|||+|++||
T Consensus 165 ~~~~~~~~~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y~~~~~~Le~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 165 RRNSVLAVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLYESTWDTLTNLYPKVSVGGYVIVDD 244 (282)
T ss_dssp GGHHHHCCCHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSHHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred cccccchhHHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCccccHHHHHHHHHhhcCCCEEEEEcC
Confidence 00 22 24689999999997 456789999999999999999999
Q ss_pred cCC-CccccCCCCCCCCCcccchHHHHHHHHHHhhcCCCeeEEEeecCCeeEEEEE
Q 032292 87 TLW-GGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDGITICRR 141 (143)
Q Consensus 87 ~~~-~g~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~lp~~~Gl~~~~k 141 (143)
+.+ .| ..+++++|++.. ++...++++..+..+-+|
T Consensus 245 ~~~~~G----------------~~~Av~Ef~~~~----~i~~~i~~~~~~~v~~rk 280 (282)
T 2wk1_A 245 YMMCPP----------------CKDAVDEYRAKF----DIADELITIDRDGVYWQR 280 (282)
T ss_dssp CTTCHH----------------HHHHHHHHHHHT----TCCSCCEECSSSCEEEEC
T ss_pred CCCCHH----------------HHHHHHHHHHhc----CCceEEEEecCEEEEEEe
Confidence 854 22 456788887544 455667788876666555
No 17
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.47 E-value=2.8e-13 Score=100.64 Aligned_cols=83 Identities=20% Similarity=0.247 Sum_probs=68.5
Q ss_pred hHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhh---CCCCCc----------------------------cC-----
Q 032292 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALT---IPEDGQ----------------------------SE----- 48 (143)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~---~~~~~~----------------------------~~----- 48 (143)
|+...++..++...++.+|||||||+|++++++|+. +.+.++ ..
T Consensus 67 p~~~~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~ 146 (236)
T 2bm8_A 67 PDTQAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFE 146 (236)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGG
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHH
Confidence 788888888888888899999999999999999987 322222 11
Q ss_pred -CC-CceeEEEEcCCccchHHHHHHHHh-cccCCeEEEEecc
Q 032292 49 -NE-GSFDYAFVDADKDNYCNYHERLMK-LLKVGGIAVYDNT 87 (143)
Q Consensus 49 -~~-~~fD~v~~d~~~~~~~~~~~~~~~-~L~~gG~li~d~~ 87 (143)
.. .+||+|++++.+.++...+.++.+ +|+|||+++++++
T Consensus 147 ~~~~~~fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 147 HLREMAHPLIFIDNAHANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp GGSSSCSSEEEEESSCSSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred hhccCCCCEEEECCchHhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 12 379999999988888899999996 9999999999876
No 18
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.26 E-value=4.1e-11 Score=86.87 Aligned_cols=132 Identities=14% Similarity=0.103 Sum_probs=83.0
Q ss_pred cChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------------
Q 032292 3 LLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------ 46 (143)
Q Consensus 3 ~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------ 46 (143)
+.+...+++..++...++.+|||||||+|..+..+++..+. ..
T Consensus 13 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 91 (217)
T 3jwh_A 13 LNQQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFF-EQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQG 91 (217)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTC-SEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEEC
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCC-CEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeC
Confidence 34455667777777778899999999999999999986542 11
Q ss_pred -----cCCCCceeEEEEcCCcc-----chHHHHHHHHhcccCCeEEEEeccCCCccccC--CC--CCCCCCcccchHHHH
Q 032292 47 -----SENEGSFDYAFVDADKD-----NYCNYHERLMKLLKVGGIAVYDNTLWGGTVAV--PE--EQVPDHFRGSSRQAI 112 (143)
Q Consensus 47 -----~~~~~~fD~v~~d~~~~-----~~~~~~~~~~~~L~~gG~li~d~~~~~g~~~~--~~--~~~~~~~~~~~~~~~ 112 (143)
+...++||+|++..... .....++.+.++|+|||++++......+.... +. ...+.+...-....+
T Consensus 92 d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (217)
T 3jwh_A 92 ALTYQDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQF 171 (217)
T ss_dssp CTTSCCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHH
T ss_pred CcccccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHH
Confidence 11125899999876432 34578899999999999887643211111000 00 000111000023457
Q ss_pred HHHHHHhhcCCCeeEEEeecCCe
Q 032292 113 LDLNRSLADDPRVQLSHVALGDG 135 (143)
Q Consensus 113 ~~f~~~l~~~~~~~~~~lp~~~G 135 (143)
+++.+.+....+|+....++++.
T Consensus 172 ~~~~~~~~~~~Gf~v~~~~~g~~ 194 (217)
T 3jwh_A 172 QNWANKITERFAYNVQFQPIGEA 194 (217)
T ss_dssp HHHHHHHHHHSSEEEEECCCSCC
T ss_pred HHHHHHHHHHcCceEEEEecCCc
Confidence 77777887788899988877653
No 19
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.26 E-value=9.5e-12 Score=96.31 Aligned_cols=112 Identities=21% Similarity=0.233 Sum_probs=75.6
Q ss_pred hcCCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------------cCCCCceeE
Q 032292 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------------------------SENEGSFDY 55 (143)
Q Consensus 17 ~~~~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------------------------~~~~~~fD~ 55 (143)
..++++|||||||+|..+.++++..+. .+ +...++||+
T Consensus 106 ~~~~~~VLdIG~G~G~~~~~l~~~~~~-~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~ 184 (314)
T 2b2c_A 106 HPDPKRVLIIGGGDGGILREVLKHESV-EKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDV 184 (314)
T ss_dssp SSSCCEEEEESCTTSHHHHHHTTCTTC-CEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHcCCC-CEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceE
Confidence 356899999999999999999876432 11 112467999
Q ss_pred EEEcCCc------cch-HHHHHHHHhcccCCeEEEEeccCCCccccCCCCCCCCCcccchHHHHHHHHHHhhcCCCeeEE
Q 032292 56 AFVDADK------DNY-CNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLS 128 (143)
Q Consensus 56 v~~d~~~------~~~-~~~~~~~~~~L~~gG~li~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~ 128 (143)
|++|... ..| ..+++.+.++|+|||+++++.- ..... + .....+.++++.+..+..+..+
T Consensus 185 Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~----~~~~~----~-----~~~~~~~~~l~~vF~~v~~~~~ 251 (314)
T 2b2c_A 185 IITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGE----SVWLH----L-----PLIAHLVAFNRKIFPAVTYAQS 251 (314)
T ss_dssp EEECCC-------------HHHHHHHHEEEEEEEEEECC----CTTTC----H-----HHHHHHHHHHHHHCSEEEEEEE
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECC----CcccC----H-----HHHHHHHHHHHHHCCcceEEEE
Confidence 9998732 113 5788999999999999998751 11100 0 0345577777777656666677
Q ss_pred Eeec---CC-eeEEEEEc
Q 032292 129 HVAL---GD-GITICRRI 142 (143)
Q Consensus 129 ~lp~---~~-Gl~~~~k~ 142 (143)
.+|. |+ |+.++.|+
T Consensus 252 ~iP~~~~g~~g~~~ask~ 269 (314)
T 2b2c_A 252 IVSTYPSGSMGYLICAKN 269 (314)
T ss_dssp ECTTSGGGEEEEEEEESS
T ss_pred EecCcCCCceEEEEEeCC
Confidence 7787 45 88888764
No 20
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.25 E-value=5.7e-12 Score=93.39 Aligned_cols=82 Identities=20% Similarity=0.235 Sum_probs=59.1
Q ss_pred HHHHHHhh--cCCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------cCCCCc
Q 032292 10 LMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------------------SENEGS 52 (143)
Q Consensus 10 ~l~~l~~~--~~~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------------------~~~~~~ 52 (143)
++..++.. .++.+|||||||+|+++.++++..+..-. ...+++
T Consensus 49 ~m~~~a~~~~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 128 (236)
T 3orh_A 49 YMHALAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGH 128 (236)
T ss_dssp HHHHHHHHHTTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTC
T ss_pred HHHHHHHhhccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccC
Confidence 34444433 35689999999999999999887543100 245678
Q ss_pred eeEEEEcCCc--------cchHHHHHHHHhcccCCeEEEEeccCCCc
Q 032292 53 FDYAFVDADK--------DNYCNYHERLMKLLKVGGIAVYDNTLWGG 91 (143)
Q Consensus 53 fD~v~~d~~~--------~~~~~~~~~~~~~L~~gG~li~d~~~~~g 91 (143)
||.|+.|... .+...+++++.++|||||++++.+....+
T Consensus 129 FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~~ 175 (236)
T 3orh_A 129 FDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWG 175 (236)
T ss_dssp EEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHH
T ss_pred CceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEecCCch
Confidence 9999988642 23456788999999999999987755443
No 21
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.25 E-value=1.9e-11 Score=94.17 Aligned_cols=110 Identities=18% Similarity=0.212 Sum_probs=78.8
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------------cCCCCceeEE
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------------------------SENEGSFDYA 56 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------------------------~~~~~~fD~v 56 (143)
.++++|||||||+|..+.++++..+. .+ +...++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~-~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSV-ESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTC-CEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCC-CEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEE
Confidence 47899999999999999999887432 11 1235689999
Q ss_pred EEcCCcc-------chHHHHHHHHhcccCCeEEEEec-cCCCccccCCCCCCCCCcccchHHHHHHHHHHhhcCCCeeEE
Q 032292 57 FVDADKD-------NYCNYHERLMKLLKVGGIAVYDN-TLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLS 128 (143)
Q Consensus 57 ~~d~~~~-------~~~~~~~~~~~~L~~gG~li~d~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~ 128 (143)
++|.... .+..+++.+.++|+|||++++++ ..|... . ....++++++.+..+.++..+
T Consensus 173 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~-------------~-~~~~~~~~l~~~f~~v~~~~~ 238 (304)
T 2o07_A 173 ITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHL-------------D-LIKEMRQFCQSLFPVVAYAYC 238 (304)
T ss_dssp EEECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTCH-------------H-HHHHHHHHHHHHCSEEEEEEE
T ss_pred EECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccch-------------H-HHHHHHHHHHHhCCCceeEEE
Confidence 9997542 13467899999999999999976 333210 0 445688888888776677767
Q ss_pred Eeec---C-CeeEEEEEc
Q 032292 129 HVAL---G-DGITICRRI 142 (143)
Q Consensus 129 ~lp~---~-~Gl~~~~k~ 142 (143)
.+|. | +|+.++.|.
T Consensus 239 ~vP~~~~g~~g~~~as~~ 256 (304)
T 2o07_A 239 TIPTYPSGQIGFMLCSKN 256 (304)
T ss_dssp ECTTSGGGEEEEEEEESS
T ss_pred EeccccCcceEEEEEeCC
Confidence 7787 3 588888753
No 22
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.23 E-value=8.1e-11 Score=93.85 Aligned_cols=123 Identities=15% Similarity=0.110 Sum_probs=79.1
Q ss_pred CCCEEEEEecc------ccHHHHHHHhhCCCCCc---------------------------cCC------CCceeEEEEc
Q 032292 19 NAKKTIEIGVF------TGYSLLLTALTIPEDGQ---------------------------SEN------EGSFDYAFVD 59 (143)
Q Consensus 19 ~~~~vLeiG~g------~G~~t~~la~~~~~~~~---------------------------~~~------~~~fD~v~~d 59 (143)
++.+||||||| +|..++.+++...+.++ +.. .++||+|+++
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisd 295 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHVDELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDD 295 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGGCBTTEEEEECCTTCHHHHHHHHHHHCCEEEEEEC
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhhcCCCcEEEEecccccchhhhhhcccCCccEEEEC
Confidence 67999999999 77778887766422232 111 4789999999
Q ss_pred CCc--cchHHHHHHHHhcccCCeEEEEeccCCCcc-ccCCCCCCCCCcccchHHHHHHHHHHhhcC---------CCee-
Q 032292 60 ADK--DNYCNYHERLMKLLKVGGIAVYDNTLWGGT-VAVPEEQVPDHFRGSSRQAILDLNRSLADD---------PRVQ- 126 (143)
Q Consensus 60 ~~~--~~~~~~~~~~~~~L~~gG~li~d~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~f~~~l~~~---------~~~~- 126 (143)
+.+ .++...|+++.++|||||+++++|+...-. ............++ ....++++.+.+... |.+.
T Consensus 296 gsH~~~d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~t-ii~~lk~l~D~l~~~~~~~~~~~~~~~~~ 374 (419)
T 3sso_A 296 GSHINAHVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGT-SLGLLKSLIDAIQHQELPSDPNRSPGYVD 374 (419)
T ss_dssp SCCCHHHHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTS-HHHHHHHHHHHHTGGGSCCCTTCCCCHHH
T ss_pred CcccchhHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcchhH-HHHHHHHHHHHhcccccCCCcCCCCCccc
Confidence 865 345678999999999999999998873211 00000000112233 666788888776531 1121
Q ss_pred --EEEeecCCeeEEEEEc
Q 032292 127 --LSHVALGDGITICRRI 142 (143)
Q Consensus 127 --~~~lp~~~Gl~~~~k~ 142 (143)
..-+.+-+++.+..|+
T Consensus 375 ~~~~~~h~y~~i~~~~kg 392 (419)
T 3sso_A 375 RNIVGLHVYHNVAFVEKG 392 (419)
T ss_dssp HHEEEEEEETTEEEEEES
T ss_pred cceeEEEecCcEEEEEec
Confidence 2335667888888875
No 23
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.23 E-value=1.1e-10 Score=84.67 Aligned_cols=131 Identities=18% Similarity=0.087 Sum_probs=81.1
Q ss_pred ChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc-------------------------------------
Q 032292 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------- 46 (143)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------- 46 (143)
.+...+++..++...++.+|||||||+|..+..+++..+. .+
T Consensus 14 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 92 (219)
T 3jwg_A 14 NQQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSF-EQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSS 92 (219)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTC-CEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECC
T ss_pred hHHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCC-CEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCc
Confidence 3455566666666678899999999999999999987642 11
Q ss_pred ----cCCCCceeEEEEcCCcc-----chHHHHHHHHhcccCCeEEEEeccCCCccccC--CC--CCCCCCcccchHHHHH
Q 032292 47 ----SENEGSFDYAFVDADKD-----NYCNYHERLMKLLKVGGIAVYDNTLWGGTVAV--PE--EQVPDHFRGSSRQAIL 113 (143)
Q Consensus 47 ----~~~~~~fD~v~~d~~~~-----~~~~~~~~~~~~L~~gG~li~d~~~~~g~~~~--~~--~~~~~~~~~~~~~~~~ 113 (143)
+...++||+|++..... .....++.+.+.|+|||++++......+.... +. ...+.+...-....++
T Consensus 93 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 172 (219)
T 3jwg_A 93 LVYRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQ 172 (219)
T ss_dssp SSSCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHH
T ss_pred ccccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHH
Confidence 11235899999875432 22467899999999999887642221111110 00 0000110000234577
Q ss_pred HHHHHhhcCCCeeEEEeecCCe
Q 032292 114 DLNRSLADDPRVQLSHVALGDG 135 (143)
Q Consensus 114 ~f~~~l~~~~~~~~~~lp~~~G 135 (143)
++.+.+....+|+....+++++
T Consensus 173 ~~~~~l~~~~Gf~v~~~~~g~~ 194 (219)
T 3jwg_A 173 TWAVKVAEKYGYSVRFLQIGEI 194 (219)
T ss_dssp HHHHHHHHHHTEEEEEEEESCC
T ss_pred HHHHHHHHHCCcEEEEEecCCc
Confidence 7777777677898888876644
No 24
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.20 E-value=1.2e-10 Score=83.67 Aligned_cols=81 Identities=16% Similarity=0.169 Sum_probs=62.7
Q ss_pred HHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc-------------------------------c-----CC
Q 032292 6 IHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ-------------------------------S-----EN 49 (143)
Q Consensus 6 ~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~-------------------------------~-----~~ 49 (143)
+....+...+...+..+|||+|||+|..++.+++..+. ++ . ..
T Consensus 27 ~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 105 (204)
T 3e05_A 27 EVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPN-GRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDD 105 (204)
T ss_dssp HHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTT-SEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTT
T ss_pred HHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhc
Confidence 33344444555667889999999999999999998753 22 0 11
Q ss_pred CCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 032292 50 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 50 ~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
.++||+|+++....++...++.+.+.|+|||++++...
T Consensus 106 ~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 106 LPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp SCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence 26799999998766788999999999999999998644
No 25
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.14 E-value=7.3e-10 Score=78.23 Aligned_cols=99 Identities=12% Similarity=0.058 Sum_probs=62.0
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc--------------------------------c---CCCCceeEEEEcC-C
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ--------------------------------S---ENEGSFDYAFVDA-D 61 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~--------------------------------~---~~~~~fD~v~~d~-~ 61 (143)
.+..+|||+|||+|..+..+++. ..... . ..+++||+|+++. .
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~ 99 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGY 99 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCC
Confidence 45789999999999999999987 21000 1 3357899999872 1
Q ss_pred c-----------cchHHHHHHHHhcccCCeEEEEeccCCCccccCCCCCCCCCcccchHHHHHHHHHHhhcCCCeeEEEe
Q 032292 62 K-----------DNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHV 130 (143)
Q Consensus 62 ~-----------~~~~~~~~~~~~~L~~gG~li~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~l 130 (143)
. ......++.+.++|+|||++++. .|.+..... + ....+.++...+. ...|....+
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~--~~~~~~~~~-----~-----~~~~~~~~~~~l~-~~~~~~~~~ 166 (185)
T 3mti_A 100 LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIM--IYYGHDGGD-----M-----EKDAVLEYVIGLD-QRVFTAMLY 166 (185)
T ss_dssp ----------CHHHHHHHHHHHHHHEEEEEEEEEE--EC------C-----H-----HHHHHHHHHHHSC-TTTEEEEEE
T ss_pred CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEE--EeCCCCCCH-----H-----HHHHHHHHHHhCC-CceEEEEEe
Confidence 1 22345678899999999999873 343321100 0 3345677776664 334665544
No 26
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.11 E-value=3e-10 Score=87.68 Aligned_cols=112 Identities=13% Similarity=0.097 Sum_probs=73.3
Q ss_pred hcCCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------------------cCCCCcee
Q 032292 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------------SENEGSFD 54 (143)
Q Consensus 17 ~~~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------------~~~~~~fD 54 (143)
..++++|||||||+|..+..+++..+. .+ +...++||
T Consensus 75 ~~~~~~VLdiG~G~G~~~~~l~~~~~~-~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD 153 (314)
T 1uir_A 75 HPEPKRVLIVGGGEGATLREVLKHPTV-EKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYD 153 (314)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSTTC-CEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEE
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhcCCC-CEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCcc
Confidence 357899999999999999999886432 11 11246799
Q ss_pred EEEEcCCccc----------hHHHHHHHHhcccCCeEEEEeccCCCccccCCCCCCCCCcccchHHHHHHHHHHhhcCCC
Q 032292 55 YAFVDADKDN----------YCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPR 124 (143)
Q Consensus 55 ~v~~d~~~~~----------~~~~~~~~~~~L~~gG~li~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~~~~ 124 (143)
+|++|..... ...+++.+.++|+|||++++.. +..... . ++ ....+.+.++.+..+..
T Consensus 154 ~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~----~~~~~~--~-~~-----~~~~~~~~l~~~F~~v~ 221 (314)
T 1uir_A 154 VVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT----GMILLT--H-HR-----VHPVVHRTVREAFRYVR 221 (314)
T ss_dssp EEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE----EEECC------C-----HHHHHHHHHHTTCSEEE
T ss_pred EEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc----cCcccc--C-HH-----HHHHHHHHHHHHCCceE
Confidence 9999975432 4678999999999999998852 111100 0 01 34445555555544444
Q ss_pred eeEEEeecCCe---eEEEEE
Q 032292 125 VQLSHVALGDG---ITICRR 141 (143)
Q Consensus 125 ~~~~~lp~~~G---l~~~~k 141 (143)
+..+.+|..+| +.++.|
T Consensus 222 ~~~~~vP~~~g~~~~~~as~ 241 (314)
T 1uir_A 222 SYKNHIPGFFLNFGFLLASD 241 (314)
T ss_dssp EEEEEEGGGTEEEEEEEEES
T ss_pred EEEEecCCCCCeEEEEEEEC
Confidence 55566788655 566665
No 27
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.11 E-value=1.8e-10 Score=85.11 Aligned_cols=86 Identities=20% Similarity=0.235 Sum_probs=62.0
Q ss_pred ChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------cCC
Q 032292 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------SEN 49 (143)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------~~~ 49 (143)
.+...+.+...+...++.+|||||||+|..+..+++..+.... ...
T Consensus 21 ~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 100 (256)
T 1nkv_A 21 TEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA 100 (256)
T ss_dssp CHHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC
T ss_pred CHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc
Confidence 3444555555555667789999999999999999987642110 011
Q ss_pred CCceeEEEEcCCc---cchHHHHHHHHhcccCCeEEEEeccCC
Q 032292 50 EGSFDYAFVDADK---DNYCNYHERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 50 ~~~fD~v~~d~~~---~~~~~~~~~~~~~L~~gG~li~d~~~~ 89 (143)
.++||+|++.... .+....++++.++|+|||.+++.+..+
T Consensus 101 ~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (256)
T 1nkv_A 101 NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYW 143 (256)
T ss_dssp SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEE
T ss_pred CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcc
Confidence 5789999986532 346788999999999999999865443
No 28
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.10 E-value=1.1e-10 Score=86.30 Aligned_cols=80 Identities=19% Similarity=0.239 Sum_probs=59.9
Q ss_pred HHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------cCCCCcee
Q 032292 10 LMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------------------SENEGSFD 54 (143)
Q Consensus 10 ~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------------------~~~~~~fD 54 (143)
++..+....++.+|||||||+|..+..+++..+.... +...++||
T Consensus 37 ~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 116 (257)
T 3f4k_A 37 AVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELD 116 (257)
T ss_dssp HHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEE
T ss_pred HHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEE
Confidence 3333334456789999999999999999998762100 22357899
Q ss_pred EEEEcCCc--cchHHHHHHHHhcccCCeEEEEeccCC
Q 032292 55 YAFVDADK--DNYCNYHERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 55 ~v~~d~~~--~~~~~~~~~~~~~L~~gG~li~d~~~~ 89 (143)
+|++.... .+....++.+.++|+|||++++.+..|
T Consensus 117 ~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 153 (257)
T 3f4k_A 117 LIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEASW 153 (257)
T ss_dssp EEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred EEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEeec
Confidence 99987532 257788999999999999999876544
No 29
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.10 E-value=3.9e-10 Score=84.98 Aligned_cols=79 Identities=14% Similarity=0.213 Sum_probs=56.4
Q ss_pred HHHHHHh--hcCCCEEEEEeccccHHHHHHHhhCCCCC-c-----------------------------------cCCCC
Q 032292 10 LMAMLLR--LVNAKKTIEIGVFTGYSLLLTALTIPEDG-Q-----------------------------------SENEG 51 (143)
Q Consensus 10 ~l~~l~~--~~~~~~vLeiG~g~G~~t~~la~~~~~~~-~-----------------------------------~~~~~ 51 (143)
++..++. ..+..+|||+|||+|..+..+++.++..+ + ....+
T Consensus 59 ~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~ 138 (261)
T 4gek_A 59 MIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE 138 (261)
T ss_dssp HHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC
T ss_pred HHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc
Confidence 3444443 34668999999999999999998875322 2 12346
Q ss_pred ceeEEEEcCCcc-----chHHHHHHHHhcccCCeEEEEeccC
Q 032292 52 SFDYAFVDADKD-----NYCNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 52 ~fD~v~~d~~~~-----~~~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
+||+|++..... +....++++.+.|+|||++++.+..
T Consensus 139 ~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 139 NASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp SEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred ccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEecc
Confidence 799999865322 2345789999999999999886543
No 30
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.10 E-value=1.7e-10 Score=88.62 Aligned_cols=73 Identities=14% Similarity=0.065 Sum_probs=57.2
Q ss_pred HHHhhcCCCEEEEEeccccH-HHHHHHhhCCCCCc----------------------------------cCCCCceeEEE
Q 032292 13 MLLRLVNAKKTIEIGVFTGY-SLLLTALTIPEDGQ----------------------------------SENEGSFDYAF 57 (143)
Q Consensus 13 ~l~~~~~~~~vLeiG~g~G~-~t~~la~~~~~~~~----------------------------------~~~~~~fD~v~ 57 (143)
.++...++.+|||||||+|. +++.+|+... ++ ....++||+||
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~g--a~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~ 193 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHVYG--MRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLM 193 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHTTC--CEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEE
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEE
Confidence 36677889999999999985 4566665432 22 11257899999
Q ss_pred EcCCccchHHHHHHHHhcccCCeEEEEecc
Q 032292 58 VDADKDNYCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 58 ~d~~~~~~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
+++...++...++++.+.|||||++++.+.
T Consensus 194 ~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 194 VAALAEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp ECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred ECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 988878888999999999999999998763
No 31
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.09 E-value=1.9e-10 Score=85.68 Aligned_cols=69 Identities=13% Similarity=0.166 Sum_probs=56.7
Q ss_pred hcCCCEEEEEeccccHHHHHHHhhCCCCCc-------------------------------------cCCCCceeEEEEc
Q 032292 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQ-------------------------------------SENEGSFDYAFVD 59 (143)
Q Consensus 17 ~~~~~~vLeiG~g~G~~t~~la~~~~~~~~-------------------------------------~~~~~~fD~v~~d 59 (143)
+.+..+|||+|||+|+.+..+|+.++++|+ +...+++|+||+|
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d 154 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYAD 154 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEe
Confidence 356799999999999999999999877665 2345789999998
Q ss_pred CCcc-chHHHHHHHHhcccCCeEEEEe
Q 032292 60 ADKD-NYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 60 ~~~~-~~~~~~~~~~~~L~~gG~li~d 85 (143)
.... +....+.++.+.|||||.+++.
T Consensus 155 ~~~~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 155 VAQPEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp CCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCChhHHHHHHHHHHhccCCCEEEEE
Confidence 7554 3456788999999999998874
No 32
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.08 E-value=6.5e-10 Score=86.68 Aligned_cols=81 Identities=26% Similarity=0.375 Sum_probs=58.9
Q ss_pred HHHHHHHh--hcCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------------
Q 032292 9 QLMAMLLR--LVNAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------------------------- 46 (143)
Q Consensus 9 ~~l~~l~~--~~~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------------------------- 46 (143)
++|..++. ..++++|||||||+|..+..+++..+. .+
T Consensus 108 e~L~~l~l~~~~~~~~VLdIG~G~G~~a~~la~~~~~-~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~ 186 (334)
T 1xj5_A 108 EMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASI-EQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAF 186 (334)
T ss_dssp HHHHHHHHTTSSCCCEEEEETCSSSHHHHHHTTCTTC-CEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHH
T ss_pred HHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHcCCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHH
Confidence 34444432 347899999999999999999986432 11
Q ss_pred -cC-CCCceeEEEEcCCcc----c---hHHHHHHHHhcccCCeEEEEe-ccCCC
Q 032292 47 -SE-NEGSFDYAFVDADKD----N---YCNYHERLMKLLKVGGIAVYD-NTLWG 90 (143)
Q Consensus 47 -~~-~~~~fD~v~~d~~~~----~---~~~~~~~~~~~L~~gG~li~d-~~~~~ 90 (143)
+. ..++||+|++|.... . +..+++.+.++|+|||+++++ +..|.
T Consensus 187 l~~~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 240 (334)
T 1xj5_A 187 LKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWL 240 (334)
T ss_dssp HHTSCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTT
T ss_pred HHhccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCccc
Confidence 11 246899999986421 1 467899999999999999997 55554
No 33
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.07 E-value=2.3e-10 Score=86.48 Aligned_cols=75 Identities=17% Similarity=0.247 Sum_probs=58.5
Q ss_pred HHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------cCCCCceeEEEEc
Q 032292 14 LLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------SENEGSFDYAFVD 59 (143)
Q Consensus 14 l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------~~~~~~fD~v~~d 59 (143)
+....++.+|||||||+|..+..+++.++...+ ....++||+|++.
T Consensus 17 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~ 96 (284)
T 3gu3_A 17 VWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELNDKYDIAICH 96 (284)
T ss_dssp TSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCSSCEEEEEEE
T ss_pred HhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcCCCeeEEEEC
Confidence 334567899999999999999999998764222 1124689999997
Q ss_pred CCc---cchHHHHHHHHhcccCCeEEEEeccC
Q 032292 60 ADK---DNYCNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 60 ~~~---~~~~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
... .+....++++.++|+|||++++.+..
T Consensus 97 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 97 AFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp SCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 642 45678899999999999999976655
No 34
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.06 E-value=4e-10 Score=78.73 Aligned_cols=78 Identities=19% Similarity=0.126 Sum_probs=57.0
Q ss_pred HHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------c--------------CCCC
Q 032292 9 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------S--------------ENEG 51 (143)
Q Consensus 9 ~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------~--------------~~~~ 51 (143)
+.+...+...+..+|||+|||+|..+..+++..+. .+ . ...+
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 93 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQ-TTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPD 93 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSS-EEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCS
T ss_pred HHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCC-CeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCC
Confidence 33334444556779999999999999999988643 11 0 0117
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcccCCeEEEEeccC
Q 032292 52 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 52 ~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
+||+|++...... ...++.+.++|+|||++++....
T Consensus 94 ~~D~i~~~~~~~~-~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 94 NPDVIFIGGGLTA-PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp CCSEEEECC-TTC-TTHHHHHHHTCCTTCEEEEEECS
T ss_pred CCCEEEECCcccH-HHHHHHHHHhcCCCCEEEEEeec
Confidence 8999998875443 67889999999999999986543
No 35
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.06 E-value=4.4e-10 Score=83.27 Aligned_cols=81 Identities=22% Similarity=0.207 Sum_probs=62.6
Q ss_pred ChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------------c
Q 032292 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------S 47 (143)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------~ 47 (143)
.+.....+...+...++.+|||+|||+|..+..+++.+.+.++ .
T Consensus 78 ~~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 157 (255)
T 3mb5_A 78 HPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG 157 (255)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC
T ss_pred cHhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc
Confidence 4556667777777778899999999999999999998433222 2
Q ss_pred CCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 032292 48 ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 48 ~~~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
...++||+|+++.. +....++.+.+.|+|||++++..
T Consensus 158 ~~~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 158 IEEENVDHVILDLP--QPERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp CCCCSEEEEEECSS--CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred cCCCCcCEEEECCC--CHHHHHHHHHHHcCCCCEEEEEE
Confidence 23567999999753 45667899999999999998753
No 36
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.05 E-value=5.6e-10 Score=81.38 Aligned_cols=67 Identities=16% Similarity=0.156 Sum_probs=51.3
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc---------------------------------c----CCCCceeEEEEcC
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------------------S----ENEGSFDYAFVDA 60 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------------------~----~~~~~fD~v~~d~ 60 (143)
.+..+|||+|||+|..+..+++..+ .++ + ...++||+|+++.
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 134 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDI 134 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEECC
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEec
Confidence 4567999999999999999998875 222 0 1136799999986
Q ss_pred CccchH-HHHHHHHhcccCCeEEEEe
Q 032292 61 DKDNYC-NYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 61 ~~~~~~-~~~~~~~~~L~~gG~li~d 85 (143)
....-. ..++++.++|||||.+++.
T Consensus 135 ~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 135 AQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 443323 3488999999999999885
No 37
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.05 E-value=1.5e-09 Score=78.64 Aligned_cols=80 Identities=15% Similarity=0.057 Sum_probs=58.1
Q ss_pred HHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc---------------------------------c--CCC
Q 032292 6 IHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------------------S--ENE 50 (143)
Q Consensus 6 ~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------------------~--~~~ 50 (143)
+....+...+...+..+|||+|||+|..++.+|+. ..... . ...
T Consensus 42 ~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~ 120 (204)
T 3njr_A 42 PMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADL 120 (204)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTS
T ss_pred HHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccC
Confidence 44444445555667789999999999999999987 21100 0 113
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcccCCeEEEEeccC
Q 032292 51 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 51 ~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
++||+||++... +.. .++.+.+.|+|||++++....
T Consensus 121 ~~~D~v~~~~~~-~~~-~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 121 PLPEAVFIGGGG-SQA-LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp CCCSEEEECSCC-CHH-HHHHHHHHSCTTCEEEEEECS
T ss_pred CCCCEEEECCcc-cHH-HHHHHHHhcCCCcEEEEEecC
Confidence 479999998744 445 899999999999999986543
No 38
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.04 E-value=4.2e-10 Score=84.67 Aligned_cols=76 Identities=14% Similarity=0.110 Sum_probs=56.1
Q ss_pred HHHHHHhhc-CCCEEEEEeccccHHHHHHHhhCCC------C------Cc---------------cCCCCceeEEEEcCC
Q 032292 10 LMAMLLRLV-NAKKTIEIGVFTGYSLLLTALTIPE------D------GQ---------------SENEGSFDYAFVDAD 61 (143)
Q Consensus 10 ~l~~l~~~~-~~~~vLeiG~g~G~~t~~la~~~~~------~------~~---------------~~~~~~fD~v~~d~~ 61 (143)
++..|.... ...+|||||||+|..+..|++.... + ++ +..+++||+|++...
T Consensus 29 l~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~ 108 (257)
T 4hg2_A 29 LFRWLGEVAPARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQA 108 (257)
T ss_dssp HHHHHHHHSSCSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSC
T ss_pred HHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeee
Confidence 445555443 3579999999999999999987532 0 00 345789999998643
Q ss_pred c--cchHHHHHHHHhcccCCeEEEEe
Q 032292 62 K--DNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 62 ~--~~~~~~~~~~~~~L~~gG~li~d 85 (143)
. .+....+.++.++|||||+|++-
T Consensus 109 ~h~~~~~~~~~e~~rvLkpgG~l~~~ 134 (257)
T 4hg2_A 109 MHWFDLDRFWAELRRVARPGAVFAAV 134 (257)
T ss_dssp CTTCCHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhHhhHHHHHHHHHHHcCCCCEEEEE
Confidence 2 35677899999999999999763
No 39
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.04 E-value=2.1e-09 Score=77.57 Aligned_cols=75 Identities=15% Similarity=0.196 Sum_probs=57.6
Q ss_pred HhhcCCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------------cCCCCceeEEEE
Q 032292 15 LRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------SENEGSFDYAFV 58 (143)
Q Consensus 15 ~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------~~~~~~fD~v~~ 58 (143)
....+..+|||+|||+|..+..+++..++..+ +...++||+|++
T Consensus 33 ~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 112 (219)
T 3dh0_A 33 FGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFM 112 (219)
T ss_dssp HTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEE
T ss_pred hCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEe
Confidence 34556789999999999999999988733222 223578999998
Q ss_pred cCCc---cchHHHHHHHHhcccCCeEEEEeccCC
Q 032292 59 DADK---DNYCNYHERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 59 d~~~---~~~~~~~~~~~~~L~~gG~li~d~~~~ 89 (143)
.... .+....++.+.++|+|||++++.+...
T Consensus 113 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 146 (219)
T 3dh0_A 113 AFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKK 146 (219)
T ss_dssp ESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred ehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecc
Confidence 7643 356778999999999999999865443
No 40
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.04 E-value=5.5e-10 Score=82.44 Aligned_cols=66 Identities=18% Similarity=0.244 Sum_probs=53.3
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------------cCC---CCceeEEEE
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------SEN---EGSFDYAFV 58 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------~~~---~~~fD~v~~ 58 (143)
.++.+|||||||+|+.++.+|...+. ++ +.. .++||+|++
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~ 147 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPH-LHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTA 147 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTT-CEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCC-CEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEE
Confidence 36789999999999999999976542 22 111 478999999
Q ss_pred cCCccchHHHHHHHHhcccCCeEEEEe
Q 032292 59 DADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 59 d~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
++ ..++...++.+.++|+|||++++.
T Consensus 148 ~~-~~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 148 RA-VARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp EC-CSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred ec-cCCHHHHHHHHHHhcCCCCEEEEE
Confidence 88 467888999999999999999874
No 41
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.03 E-value=3.8e-09 Score=75.24 Aligned_cols=69 Identities=14% Similarity=0.184 Sum_probs=52.9
Q ss_pred hcCCCEEEEEeccccHHHHHHHhhCCCCCc-------------------------------------c-CCCCceeEEEE
Q 032292 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQ-------------------------------------S-ENEGSFDYAFV 58 (143)
Q Consensus 17 ~~~~~~vLeiG~g~G~~t~~la~~~~~~~~-------------------------------------~-~~~~~fD~v~~ 58 (143)
..+..+|||+|||+|..+..+++.+++.++ . ...++||+|++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 99 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMF 99 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEE
Confidence 346689999999999999999998643222 1 34578999998
Q ss_pred cCCc------------cchHHHHHHHHhcccCCeEEEEe
Q 032292 59 DADK------------DNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 59 d~~~------------~~~~~~~~~~~~~L~~gG~li~d 85 (143)
+... ..+...++.+.++|+|||++++.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~ 138 (197)
T 3eey_A 100 NLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVV 138 (197)
T ss_dssp EESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEE
Confidence 7521 13456899999999999999874
No 42
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.03 E-value=3.3e-10 Score=84.59 Aligned_cols=71 Identities=21% Similarity=0.246 Sum_probs=55.8
Q ss_pred hcCCCEEEEEeccccHHHHHHHhhCCCCCc-------------------------------------cCCCCceeEEEEc
Q 032292 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQ-------------------------------------SENEGSFDYAFVD 59 (143)
Q Consensus 17 ~~~~~~vLeiG~g~G~~t~~la~~~~~~~~-------------------------------------~~~~~~fD~v~~d 59 (143)
..++.+|||||||+|..+..+++. +. ++ +...++||+|++.
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~-~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~ 121 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH-VT-GQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSE 121 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT-CS-SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEES
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc-cC-CEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEc
Confidence 456789999999999999999987 32 11 2235789999987
Q ss_pred CCc--cchHHHHHHHHhcccCCeEEEEeccCC
Q 032292 60 ADK--DNYCNYHERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 60 ~~~--~~~~~~~~~~~~~L~~gG~li~d~~~~ 89 (143)
... .+....++.+.++|+|||++++.+..+
T Consensus 122 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 153 (267)
T 3kkz_A 122 GAIYNIGFERGLNEWRKYLKKGGYLAVSECSW 153 (267)
T ss_dssp SCGGGTCHHHHHHHHGGGEEEEEEEEEEEEEE
T ss_pred CCceecCHHHHHHHHHHHcCCCCEEEEEEeee
Confidence 642 256788999999999999999877654
No 43
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.01 E-value=2e-09 Score=81.79 Aligned_cols=111 Identities=14% Similarity=-0.002 Sum_probs=71.5
Q ss_pred hcCCCEEEEEeccccHHHHHHHhhCCCCCc----------------cC----------------------------C--C
Q 032292 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------SE----------------------------N--E 50 (143)
Q Consensus 17 ~~~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------~~----------------------------~--~ 50 (143)
..++++|||||||+|..+..+++. +. .+ .. . .
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~-~~-~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~ 150 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQH-DV-DEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNN 150 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTS-CC-SEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHC
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhC-CC-CEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhccc
Confidence 457899999999999999999876 32 11 00 0 4
Q ss_pred CceeEEEEcCCcc-----c--hHHHHHHHHhcccCCeEEEEeccCCCccccCCCCCCCCCcccchHHHHHHHHHHhhcCC
Q 032292 51 GSFDYAFVDADKD-----N--YCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDP 123 (143)
Q Consensus 51 ~~fD~v~~d~~~~-----~--~~~~~~~~~~~L~~gG~li~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~~~ 123 (143)
++||+|++|.... . ...+++.+.++|+|||+++++... .... ++ ....+.++...+..+.
T Consensus 151 ~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~----~~~~----~~-----~~~~~~~~l~~~f~~v 217 (281)
T 1mjf_A 151 RGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGS----VYLF----TD-----ELISAYKEMKKVFDRV 217 (281)
T ss_dssp CCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEE----TTTS----HH-----HHHHHHHHHHHHCSEE
T ss_pred CCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC----cccC----HH-----HHHHHHHHHHHHCCce
Confidence 5799999997521 1 367889999999999999986211 1000 00 3334555555554344
Q ss_pred CeeEEEeecCCe---eEEEEEc
Q 032292 124 RVQLSHVALGDG---ITICRRI 142 (143)
Q Consensus 124 ~~~~~~lp~~~G---l~~~~k~ 142 (143)
.+..+.+|..+| +.++.|.
T Consensus 218 ~~~~~~vP~~~g~~~~~~as~~ 239 (281)
T 1mjf_A 218 YYYSFPVIGYASPWAFLVGVKG 239 (281)
T ss_dssp EEEEECCTTSSSSEEEEEEEES
T ss_pred EEEEEecCCCCceEEEEEeeCC
Confidence 445556787644 6777763
No 44
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.01 E-value=2.3e-09 Score=76.18 Aligned_cols=70 Identities=11% Similarity=0.060 Sum_probs=51.8
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------c-CCCCceeEEEEcCC
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------------------S-ENEGSFDYAFVDAD 61 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------------------~-~~~~~fD~v~~d~~ 61 (143)
.++.+|||+|||+|..++.+++.-..... . ...++||+|+++..
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p 122 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPP 122 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCC
Confidence 46789999999999999987764221000 1 22678999999864
Q ss_pred cc----chHHHHHHHHh--cccCCeEEEEecc
Q 032292 62 KD----NYCNYHERLMK--LLKVGGIAVYDNT 87 (143)
Q Consensus 62 ~~----~~~~~~~~~~~--~L~~gG~li~d~~ 87 (143)
.. .+...++.+.+ +|+|||+++++..
T Consensus 123 ~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 123 YNVDSADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp TTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred CCcchhhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 32 35677888888 9999999998643
No 45
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.00 E-value=7.7e-10 Score=82.25 Aligned_cols=69 Identities=17% Similarity=0.220 Sum_probs=52.6
Q ss_pred hcCCCEEEEEeccccHHHHHHHhhCCCCCc---------------------------------c----CCCCceeEEEEc
Q 032292 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------------------S----ENEGSFDYAFVD 59 (143)
Q Consensus 17 ~~~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------------------~----~~~~~fD~v~~d 59 (143)
..+..+|||+|||+|+.|..+|+.+.+.|+ + ...++||+||+|
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d 153 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVD 153 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEec
Confidence 456789999999999999999988765444 0 123689999999
Q ss_pred CCccchHHHHH-HHHhcccCCeEEEEe
Q 032292 60 ADKDNYCNYHE-RLMKLLKVGGIAVYD 85 (143)
Q Consensus 60 ~~~~~~~~~~~-~~~~~L~~gG~li~d 85 (143)
....+....+. .+.+.|||||.+++.
T Consensus 154 ~a~~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 154 IAQPDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp CCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCChhHHHHHHHHHHHhCCCCeEEEEE
Confidence 87655555544 444599999999875
No 46
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.99 E-value=5.2e-10 Score=82.25 Aligned_cols=79 Identities=19% Similarity=0.241 Sum_probs=53.5
Q ss_pred HHHHHHHhh--cCCCEEEEEeccccHHHHHHHhhCCCC--Cc---------------------------------cCCCC
Q 032292 9 QLMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPED--GQ---------------------------------SENEG 51 (143)
Q Consensus 9 ~~l~~l~~~--~~~~~vLeiG~g~G~~t~~la~~~~~~--~~---------------------------------~~~~~ 51 (143)
.++..++.. .+..+|||||||+|..+..+++..... +. +..++
T Consensus 48 ~~~~~l~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 127 (236)
T 1zx0_A 48 PYMHALAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDG 127 (236)
T ss_dssp HHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTT
T ss_pred HHHHHHHhhcCCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCC
Confidence 344444433 456799999999999999997643210 00 13357
Q ss_pred ceeEEEEcCCc--------cchHHHHHHHHhcccCCeEEEEecc
Q 032292 52 SFDYAFVDADK--------DNYCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 52 ~fD~v~~d~~~--------~~~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
+||+|++|... ......++++.++|||||++++-+.
T Consensus 128 ~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 128 HFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp CEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred ceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 89999994321 1122458889999999999987554
No 47
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.99 E-value=7.2e-10 Score=79.77 Aligned_cols=79 Identities=27% Similarity=0.300 Sum_probs=57.2
Q ss_pred ChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCC-CCc--------------------------------cCCC
Q 032292 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE-DGQ--------------------------------SENE 50 (143)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~-~~~--------------------------------~~~~ 50 (143)
.+.....+...+...++.+|||||||+|+.+..+++.... .+. ....
T Consensus 62 ~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 141 (210)
T 3lbf_A 62 QPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQAR 141 (210)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGG
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccC
Confidence 4555566666666677899999999999999999987321 000 1124
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 032292 51 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 51 ~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
++||+|+++....... +.+.++|+|||++++.
T Consensus 142 ~~~D~i~~~~~~~~~~---~~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 142 APFDAIIVTAAPPEIP---TALMTQLDEGGILVLP 173 (210)
T ss_dssp CCEEEEEESSBCSSCC---THHHHTEEEEEEEEEE
T ss_pred CCccEEEEccchhhhh---HHHHHhcccCcEEEEE
Confidence 6899999987654433 3678999999999874
No 48
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.99 E-value=1.5e-09 Score=80.89 Aligned_cols=81 Identities=12% Similarity=0.194 Sum_probs=58.6
Q ss_pred HHHHHHHh---hcCCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------cCCC
Q 032292 9 QLMAMLLR---LVNAKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------------------SENE 50 (143)
Q Consensus 9 ~~l~~l~~---~~~~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------------------~~~~ 50 (143)
+++..++. ..++.+|||||||+|..+..+++..+.... +...
T Consensus 48 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 127 (273)
T 3bus_A 48 RLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFED 127 (273)
T ss_dssp HHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCT
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCC
Confidence 34444443 346789999999999999999986531100 2235
Q ss_pred CceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEeccCC
Q 032292 51 GSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 51 ~~fD~v~~d~~---~~~~~~~~~~~~~~L~~gG~li~d~~~~ 89 (143)
++||+|++... ..+....++++.++|+|||++++.+...
T Consensus 128 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 128 ASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp TCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred CCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeec
Confidence 78999998653 2456788999999999999999876543
No 49
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.98 E-value=1.6e-09 Score=79.12 Aligned_cols=79 Identities=13% Similarity=0.130 Sum_probs=59.0
Q ss_pred HHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCC-CC-----------------c----------cCCCCceeEEEEcC
Q 032292 9 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE-DG-----------------Q----------SENEGSFDYAFVDA 60 (143)
Q Consensus 9 ~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~-~~-----------------~----------~~~~~~fD~v~~d~ 60 (143)
.++..+....++.+|||||||+|..+..+++..+. .+ . ...+++||+|++..
T Consensus 32 ~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~ 111 (250)
T 2p7i_A 32 FMVRAFTPFFRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLPRRYDNIVLTH 111 (250)
T ss_dssp HHHHHHGGGCCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCSSCEEEEEEES
T ss_pred HHHHHHHhhcCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcCcCCcccEEEEhh
Confidence 34555555567889999999999999999876542 00 0 12457899999876
Q ss_pred Cc---cchHHHHHHHH-hcccCCeEEEEecc
Q 032292 61 DK---DNYCNYHERLM-KLLKVGGIAVYDNT 87 (143)
Q Consensus 61 ~~---~~~~~~~~~~~-~~L~~gG~li~d~~ 87 (143)
.. .+....++++. ++|+|||++++...
T Consensus 112 ~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 112 VLEHIDDPVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp CGGGCSSHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHhhcCHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 42 35678899999 99999999988653
No 50
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.98 E-value=1.7e-09 Score=80.31 Aligned_cols=76 Identities=13% Similarity=0.161 Sum_probs=56.6
Q ss_pred HHHHhhcCCCEEEEEeccccHHHHHHHhhCCC------C--------------C---c----------cCCCCceeEEEE
Q 032292 12 AMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE------D--------------G---Q----------SENEGSFDYAFV 58 (143)
Q Consensus 12 ~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~------~--------------~---~----------~~~~~~fD~v~~ 58 (143)
...+...++.+|||||||+|..+..+++..+. + + . +..+++||+|++
T Consensus 30 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~ 109 (260)
T 1vl5_A 30 MQIAALKGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTC 109 (260)
T ss_dssp HHHHTCCSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEE
T ss_pred HHHhCCCCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEE
Confidence 33344557899999999999999999877531 0 0 0 234578999998
Q ss_pred cCCc---cchHHHHHHHHhcccCCeEEEEecc
Q 032292 59 DADK---DNYCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 59 d~~~---~~~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
.... .+....++++.++|+|||++++.+.
T Consensus 110 ~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 110 RIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 7532 4567889999999999999988543
No 51
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.97 E-value=2.9e-09 Score=74.74 Aligned_cols=82 Identities=17% Similarity=0.118 Sum_probs=61.0
Q ss_pred hHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCC------C-----------------Cc---------c-CCC-
Q 032292 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE------D-----------------GQ---------S-ENE- 50 (143)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~------~-----------------~~---------~-~~~- 50 (143)
......+...+...++.+|||+|||+|..+..+++.... + .. . ...
T Consensus 19 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 98 (192)
T 1l3i_A 19 MEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI 98 (192)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC
Confidence 344455555556667889999999999999999876411 0 00 0 112
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 032292 51 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 51 ~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
++||+|+++....+....++.+.++|+|||.+++..
T Consensus 99 ~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~ 134 (192)
T 1l3i_A 99 PDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA 134 (192)
T ss_dssp CCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 589999998765677889999999999999998854
No 52
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.97 E-value=1.2e-09 Score=82.97 Aligned_cols=72 Identities=11% Similarity=0.091 Sum_probs=55.1
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc--------------------------------cCCCCceeEEEEcCCc---
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ--------------------------------SENEGSFDYAFVDADK--- 62 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~--------------------------------~~~~~~fD~v~~d~~~--- 62 (143)
.+..+|||||||+|..+..+++..+.... ....++||+|++....
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~~~~~ 150 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPVDRIVSLGAFEHF 150 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCCSEEEEESCGGGT
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcCCCccEEEEcchHHhc
Confidence 45679999999999999999988542110 1126789999987532
Q ss_pred ---------cchHHHHHHHHhcccCCeEEEEeccCC
Q 032292 63 ---------DNYCNYHERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 63 ---------~~~~~~~~~~~~~L~~gG~li~d~~~~ 89 (143)
.++..+++++.++|+|||++++.+...
T Consensus 151 ~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 186 (302)
T 3hem_A 151 ADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITI 186 (302)
T ss_dssp TCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEEC
T ss_pred CccccccchhHHHHHHHHHHHhcCCCcEEEEEEEec
Confidence 234688999999999999999876654
No 53
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.97 E-value=2.9e-09 Score=80.73 Aligned_cols=68 Identities=19% Similarity=0.198 Sum_probs=52.3
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------------cCCCCceeEE
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------------------------SENEGSFDYA 56 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------------------------~~~~~~fD~v 56 (143)
.++++|||||||+|..+..+++..+. .+ +...++||+|
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~-~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~I 152 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSV-KKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVI 152 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTC-SEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCC-ceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEE
Confidence 46899999999999999999876432 11 1124689999
Q ss_pred EEcCCccc-------hHHHHHHHHhcccCCeEEEEec
Q 032292 57 FVDADKDN-------YCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 57 ~~d~~~~~-------~~~~~~~~~~~L~~gG~li~d~ 86 (143)
++|..... -.++++.+.++|+|||++++..
T Consensus 153 i~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 153 MVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp EESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 99875321 1568999999999999999863
No 54
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.97 E-value=3.5e-09 Score=77.94 Aligned_cols=84 Identities=17% Similarity=0.137 Sum_probs=61.5
Q ss_pred hHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCC-Cc--------------------------------cCCCC
Q 032292 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPED-GQ--------------------------------SENEG 51 (143)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~-~~--------------------------------~~~~~ 51 (143)
+....-+..+....+..+|||||||+|..+..+++..+.- +. +..++
T Consensus 7 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 86 (239)
T 1xxl_A 7 HHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDD 86 (239)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTT
T ss_pred CCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCC
Confidence 3444445555567788999999999999999998775310 00 23357
Q ss_pred ceeEEEEcCCc---cchHHHHHHHHhcccCCeEEEEeccC
Q 032292 52 SFDYAFVDADK---DNYCNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 52 ~fD~v~~d~~~---~~~~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
+||+|++.... .+....++++.++|+|||++++.+..
T Consensus 87 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 126 (239)
T 1xxl_A 87 SFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHY 126 (239)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 89999987532 45678899999999999999885443
No 55
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.96 E-value=2.2e-09 Score=81.02 Aligned_cols=64 Identities=13% Similarity=0.048 Sum_probs=49.4
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------------cCCCCceeEEEEcCC
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------SENEGSFDYAFVDAD 61 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------~~~~~~fD~v~~d~~ 61 (143)
.++++|||||||+|..+..+++. +.... ... ++||+|++|..
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~-~~fD~Ii~d~~ 148 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-DTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI-KKYDLIFCLQE 148 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-SCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC-CCEEEEEESSC
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH-hhCCEEEECCC
Confidence 46789999999999999998876 41000 001 57999999974
Q ss_pred ccchHHHHHHHHhcccCCeEEEEe
Q 032292 62 KDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 62 ~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
. ...+++.+.+.|+|||++++.
T Consensus 149 d--p~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 149 P--DIHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp C--CHHHHHHHHTTEEEEEEEEEE
T ss_pred C--hHHHHHHHHHhcCCCcEEEEE
Confidence 3 345889999999999999885
No 56
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.96 E-value=5.6e-09 Score=74.86 Aligned_cols=80 Identities=14% Similarity=0.175 Sum_probs=58.7
Q ss_pred HHHHHHHHHh-hcCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------cCCCC
Q 032292 7 HGQLMAMLLR-LVNAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------SENEG 51 (143)
Q Consensus 7 ~~~~l~~l~~-~~~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------~~~~~ 51 (143)
...++..+.. ..+..+|||+|||+|..+..+++. +. .+ ....+
T Consensus 47 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~-~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 124 (205)
T 3grz_A 47 TQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKL-GA-KSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDG 124 (205)
T ss_dssp HHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHT-TC-SEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCS
T ss_pred HHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHC-CC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCC
Confidence 3344555544 345789999999999999998874 22 11 22357
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcccCCeEEEEeccC
Q 032292 52 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 52 ~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
+||+|+++.....+...++.+.++|+|||++++.+..
T Consensus 125 ~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 161 (205)
T 3grz_A 125 KFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSGID 161 (205)
T ss_dssp CEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEecC
Confidence 8999999876656667788888999999999985443
No 57
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.95 E-value=9.8e-10 Score=82.17 Aligned_cols=71 Identities=24% Similarity=0.207 Sum_probs=56.0
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------------cCCCCceeEEEEcCC
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------SENEGSFDYAFVDAD 61 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------~~~~~~fD~v~~d~~ 61 (143)
.++.+|||||||+|..+..+++..+. .+ +...++||+|++...
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPD-AEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFV 114 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTT-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESC
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEech
Confidence 46789999999999999999998653 11 234678999998753
Q ss_pred c---cchHHHHHHHHhcccCCeEEEEeccCC
Q 032292 62 K---DNYCNYHERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 62 ~---~~~~~~~~~~~~~L~~gG~li~d~~~~ 89 (143)
. .+....++.+.++|+|||++++.+..+
T Consensus 115 l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (276)
T 3mgg_A 115 LEHLQSPEEALKSLKKVLKPGGTITVIEGDH 145 (276)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEEECG
T ss_pred hhhcCCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 2 356688999999999999999865443
No 58
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.95 E-value=1.9e-09 Score=81.47 Aligned_cols=74 Identities=12% Similarity=0.170 Sum_probs=56.1
Q ss_pred hhcCCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------cCCCCceeEEEEcC
Q 032292 16 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------------------SENEGSFDYAFVDA 60 (143)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------------------~~~~~~fD~v~~d~ 60 (143)
...++.+|||||||+|..+..+++..+.... +..+++||+|++..
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 158 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQD 158 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecc
Confidence 4456789999999999999999987432100 22357899999875
Q ss_pred Cc---cchHHHHHHHHhcccCCeEEEEeccCC
Q 032292 61 DK---DNYCNYHERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 61 ~~---~~~~~~~~~~~~~L~~gG~li~d~~~~ 89 (143)
.. .+....++++.++|+|||++++.+...
T Consensus 159 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 159 AFLHSPDKLKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp CGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred hhhhcCCHHHHHHHHHHHcCCCeEEEEEEecc
Confidence 32 356788999999999999999876543
No 59
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.95 E-value=1.4e-09 Score=78.57 Aligned_cols=78 Identities=29% Similarity=0.350 Sum_probs=57.1
Q ss_pred hHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------cCC
Q 032292 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------------------SEN 49 (143)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------------------~~~ 49 (143)
+.....+..++...+..+|||||||+|+.+..+++..++.++ ...
T Consensus 63 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 142 (215)
T 2yxe_A 63 IHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE 142 (215)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG
T ss_pred HHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC
Confidence 455555555566667889999999999999999988742221 111
Q ss_pred -CCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 032292 50 -EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 50 -~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
.++||+|+++....... +.+.++|+|||.+++.
T Consensus 143 ~~~~fD~v~~~~~~~~~~---~~~~~~L~pgG~lv~~ 176 (215)
T 2yxe_A 143 PLAPYDRIYTTAAGPKIP---EPLIRQLKDGGKLLMP 176 (215)
T ss_dssp GGCCEEEEEESSBBSSCC---HHHHHTEEEEEEEEEE
T ss_pred CCCCeeEEEECCchHHHH---HHHHHHcCCCcEEEEE
Confidence 46799999987554433 4778999999999874
No 60
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.95 E-value=1.4e-09 Score=80.00 Aligned_cols=81 Identities=15% Similarity=0.196 Sum_probs=56.8
Q ss_pred HHHHHHHHHhhc----CCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------cC
Q 032292 7 HGQLMAMLLRLV----NAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------SE 48 (143)
Q Consensus 7 ~~~~l~~l~~~~----~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------~~ 48 (143)
...++..++... ++.+|||||||+|..+..+++....... +.
T Consensus 63 ~~~~~~~l~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~ 142 (241)
T 2ex4_A 63 SRKFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTP 142 (241)
T ss_dssp HHHHHHGGGC----CCCCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCC
T ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCC
Confidence 445566655443 4789999999999999998876521100 12
Q ss_pred CCCceeEEEEcCCcc-----chHHHHHHHHhcccCCeEEEEecc
Q 032292 49 NEGSFDYAFVDADKD-----NYCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 49 ~~~~fD~v~~d~~~~-----~~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
..++||+|+++.... .+...++++.++|+|||++++.+.
T Consensus 143 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 186 (241)
T 2ex4_A 143 EPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDN 186 (241)
T ss_dssp CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEc
Confidence 345899999986432 244788999999999999988543
No 61
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.94 E-value=2.2e-09 Score=76.92 Aligned_cols=71 Identities=15% Similarity=0.147 Sum_probs=53.3
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCCC--Cc---------------------------------cCCCCceeEEEEcCCc-
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPED--GQ---------------------------------SENEGSFDYAFVDADK- 62 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~~--~~---------------------------------~~~~~~fD~v~~d~~~- 62 (143)
++.+|||+|||+|..+..+++..... +. +...++||+|++....
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~ 122 (219)
T 3dlc_A 43 TAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVF 122 (219)
T ss_dssp CEEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHh
Confidence 34599999999999999999872100 00 2335789999997643
Q ss_pred --cchHHHHHHHHhcccCCeEEEEeccCC
Q 032292 63 --DNYCNYHERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 63 --~~~~~~~~~~~~~L~~gG~li~d~~~~ 89 (143)
.+....++++.++|+|||.+++.+...
T Consensus 123 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 123 FWEDVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred hccCHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 355788999999999999999875443
No 62
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.94 E-value=2.7e-09 Score=77.73 Aligned_cols=77 Identities=19% Similarity=0.216 Sum_probs=54.2
Q ss_pred HHHHHHHHhhcCCCEEEEEecc-ccHHHHHHHhhCCCC--Cc--------------------------------cCCCCc
Q 032292 8 GQLMAMLLRLVNAKKTIEIGVF-TGYSLLLTALTIPED--GQ--------------------------------SENEGS 52 (143)
Q Consensus 8 ~~~l~~l~~~~~~~~vLeiG~g-~G~~t~~la~~~~~~--~~--------------------------------~~~~~~ 52 (143)
.+++.......+..+|||+||| +|..++.+++..... +. ....++
T Consensus 44 ~~~l~~~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 123 (230)
T 3evz_A 44 SRYIFLKTFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGT 123 (230)
T ss_dssp HHHHHHHTTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSC
T ss_pred hhhhHhHhhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCc
Confidence 3444333334567899999999 999999999874210 00 112478
Q ss_pred eeEEEEcCCc----------------------cchHHHHHHHHhcccCCeEEEE
Q 032292 53 FDYAFVDADK----------------------DNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 53 fD~v~~d~~~----------------------~~~~~~~~~~~~~L~~gG~li~ 84 (143)
||+|+++..- ..+...++.+.++|+|||++++
T Consensus 124 fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 177 (230)
T 3evz_A 124 FDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVAL 177 (230)
T ss_dssp EEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEE
T ss_pred eeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEE
Confidence 9999987321 1246788999999999999987
No 63
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.94 E-value=2.1e-09 Score=78.31 Aligned_cols=68 Identities=16% Similarity=0.196 Sum_probs=52.0
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc--------------------------------c-----CCCCceeEEEEcC
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ--------------------------------S-----ENEGSFDYAFVDA 60 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~--------------------------------~-----~~~~~fD~v~~d~ 60 (143)
.+..+|||+|||+|..+..+++.+++.++ . ...++||+|+++.
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~ 151 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDV 151 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECC
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECC
Confidence 45679999999999999999987543222 1 1235799999987
Q ss_pred CccchHHH-HHHHHhcccCCeEEEEe
Q 032292 61 DKDNYCNY-HERLMKLLKVGGIAVYD 85 (143)
Q Consensus 61 ~~~~~~~~-~~~~~~~L~~gG~li~d 85 (143)
...+.... ++.+.++|+|||++++.
T Consensus 152 ~~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 152 AQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 65444444 89999999999999875
No 64
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.94 E-value=1.4e-08 Score=71.33 Aligned_cols=80 Identities=10% Similarity=0.038 Sum_probs=56.6
Q ss_pred HHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCC------------------------C--c---------cCCCC
Q 032292 7 HGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPED------------------------G--Q---------SENEG 51 (143)
Q Consensus 7 ~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~------------------------~--~---------~~~~~ 51 (143)
..+.+...+...+..+|||+|||+|..+..+++. ... . . ....+
T Consensus 40 ~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 118 (194)
T 1dus_A 40 GTKILVENVVVDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDR 118 (194)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTS
T ss_pred HHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccC
Confidence 3344444445557789999999999999999876 210 0 0 11245
Q ss_pred ceeEEEEcCCc----cchHHHHHHHHhcccCCeEEEEecc
Q 032292 52 SFDYAFVDADK----DNYCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 52 ~fD~v~~d~~~----~~~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
+||+|+++... ......++.+.++|+|||++++...
T Consensus 119 ~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 119 KYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp CEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 89999998642 2345788899999999999988543
No 65
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.94 E-value=1.4e-09 Score=81.25 Aligned_cols=64 Identities=25% Similarity=0.404 Sum_probs=52.4
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------------c---CCCCceeEEEEc
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------S---ENEGSFDYAFVD 59 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------~---~~~~~fD~v~~d 59 (143)
++.+|||||||+|+.++.+|...+. ++ . ...++||+|++.
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPE-LELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTT-CEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 4689999999999999999988764 22 1 123789999998
Q ss_pred CCccchHHHHHHHHhcccCCeEEEE
Q 032292 60 ADKDNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 60 ~~~~~~~~~~~~~~~~L~~gG~li~ 84 (143)
+. .++...++.+.++|+|||++++
T Consensus 159 a~-~~~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 159 AV-APLCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp SS-CCHHHHHHHHGGGEEEEEEEEE
T ss_pred Cc-CCHHHHHHHHHHHcCCCeEEEE
Confidence 74 4677889999999999999876
No 66
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.94 E-value=2.7e-09 Score=80.43 Aligned_cols=80 Identities=14% Similarity=0.157 Sum_probs=59.2
Q ss_pred HHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCC-CCc------------------------------------c--
Q 032292 7 HGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE-DGQ------------------------------------S-- 47 (143)
Q Consensus 7 ~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~-~~~------------------------------------~-- 47 (143)
..+++..++...++.+|||||||+|..+..+++.... .+. +
T Consensus 45 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 124 (293)
T 3thr_A 45 YKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKD 124 (293)
T ss_dssp HHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHH
T ss_pred HHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccc
Confidence 3456666666667899999999999999999887321 000 1
Q ss_pred -CCCCceeEEEEcC-C---ccc-------hHHHHHHHHhcccCCeEEEEec
Q 032292 48 -ENEGSFDYAFVDA-D---KDN-------YCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 48 -~~~~~fD~v~~d~-~---~~~-------~~~~~~~~~~~L~~gG~li~d~ 86 (143)
...++||+|++.+ . ..+ ....++.+.++|+|||++++..
T Consensus 125 ~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 125 VPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp SCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 3457899999863 1 123 6778999999999999999763
No 67
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.94 E-value=1.8e-09 Score=74.54 Aligned_cols=70 Identities=14% Similarity=0.095 Sum_probs=51.8
Q ss_pred hcCCCEEEEEeccccHHHHHHHhhCCCCCc-------------------------c--------CCCCceeEEEEcCCc-
Q 032292 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQ-------------------------S--------ENEGSFDYAFVDADK- 62 (143)
Q Consensus 17 ~~~~~~vLeiG~g~G~~t~~la~~~~~~~~-------------------------~--------~~~~~fD~v~~d~~~- 62 (143)
..+..+|||+|||+|..+..+++.+++..+ + ...++||+|+++...
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~ 99 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAPN 99 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCCCTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCCCC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECccccccCcEEEEEcccccchhhhhhhccCCCCceeEEEECCCcc
Confidence 346789999999999999999988532111 1 234689999997532
Q ss_pred --cch-----------HHHHHHHHhcccCCeEEEEec
Q 032292 63 --DNY-----------CNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 63 --~~~-----------~~~~~~~~~~L~~gG~li~d~ 86 (143)
... ...++.+.++|+|||.+++..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (180)
T 1ej0_A 100 MSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKV 136 (180)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 122 567888999999999998743
No 68
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.94 E-value=6.4e-09 Score=79.68 Aligned_cols=67 Identities=22% Similarity=0.193 Sum_probs=50.2
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------------------cCCCCceeE
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------------SENEGSFDY 55 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------------~~~~~~fD~ 55 (143)
.++++|||||||+|..+..+++..+. .+ ....++||+
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~-~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDv 160 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNV-ESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTC-CEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCC-CEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccE
Confidence 46899999999999999999986432 11 112468999
Q ss_pred EEEcCCccc-------hHHHHHHHHhcccCCeEEEEe
Q 032292 56 AFVDADKDN-------YCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 56 v~~d~~~~~-------~~~~~~~~~~~L~~gG~li~d 85 (143)
|++|..... ..++++.+.+.|+|||++++.
T Consensus 161 Ii~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 197 (294)
T 3adn_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp EEECC----------CCHHHHHHHHHTEEEEEEEEEE
T ss_pred EEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEe
Confidence 999874321 156889999999999999885
No 69
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.93 E-value=1.9e-09 Score=75.54 Aligned_cols=68 Identities=18% Similarity=0.194 Sum_probs=50.7
Q ss_pred hcCCCEEEEEeccccHHHHHHHhhCCCCCc--------------------------------------cCCCCceeEEEE
Q 032292 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQ--------------------------------------SENEGSFDYAFV 58 (143)
Q Consensus 17 ~~~~~~vLeiG~g~G~~t~~la~~~~~~~~--------------------------------------~~~~~~fD~v~~ 58 (143)
..++.+|||+|||+|..++.+++. +. .+ +...++||+|++
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~-~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~ 106 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR-GM-SAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFL 106 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT-TC-CEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEE
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc-CC-CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEE
Confidence 456789999999999999999876 31 11 112367999999
Q ss_pred cCCc--cchHHHHHHHH--hcccCCeEEEEec
Q 032292 59 DADK--DNYCNYHERLM--KLLKVGGIAVYDN 86 (143)
Q Consensus 59 d~~~--~~~~~~~~~~~--~~L~~gG~li~d~ 86 (143)
+... ..+...++.+. ++|+|||++++..
T Consensus 107 ~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~ 138 (177)
T 2esr_A 107 DPPYAKETIVATIEALAAKNLLSEQVMVVCET 138 (177)
T ss_dssp CCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred CCCCCcchHHHHHHHHHhCCCcCCCcEEEEEE
Confidence 8652 34456677776 9999999999864
No 70
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.93 E-value=2.1e-09 Score=78.98 Aligned_cols=71 Identities=15% Similarity=0.086 Sum_probs=53.9
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCC-CCc--------------------------cCCCCceeEEEEcCCc-----cch
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPE-DGQ--------------------------SENEGSFDYAFVDADK-----DNY 65 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~-~~~--------------------------~~~~~~fD~v~~d~~~-----~~~ 65 (143)
.++.+|||||||+|..+..+++.... .+. +..+++||+|++.... .++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~~~~ 119 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGKFNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDPERL 119 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTTSEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCGGGH
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhhcceeeccHHHHhhhcCCCCeeEEEECCchhhCCcHHH
Confidence 45689999999999999999886321 000 2346889999987532 245
Q ss_pred HHHHHHHHhcccCCeEEEEeccC
Q 032292 66 CNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 66 ~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
..+++++.++|+|||++++....
T Consensus 120 ~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 120 FELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp HHHHHHHHHHBCTTCCEEEEEEC
T ss_pred HHHHHHHHHHcCCCcEEEEEeCC
Confidence 78899999999999999986543
No 71
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.93 E-value=4.6e-09 Score=78.29 Aligned_cols=81 Identities=16% Similarity=0.063 Sum_probs=57.5
Q ss_pred hHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCC----C--------C----c-----------cCCCCceeEEE
Q 032292 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE----D--------G----Q-----------SENEGSFDYAF 57 (143)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~----~--------~----~-----------~~~~~~fD~v~ 57 (143)
+...+.+...+...++.+|||||||+|..+..+++.... + + . +..+++||+|+
T Consensus 20 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~ 99 (261)
T 3ege_A 20 IRIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVI 99 (261)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEE
T ss_pred HHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEE
Confidence 344455555555567899999999999999999873210 0 0 0 23357899999
Q ss_pred EcCCc---cchHHHHHHHHhcccCCeEEEEec
Q 032292 58 VDADK---DNYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 58 ~d~~~---~~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
+.... .+....++++.++|+ ||.+++.+
T Consensus 100 ~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 100 SILAIHHFSHLEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp EESCGGGCSSHHHHHHHHHHHBC-SSCEEEEE
T ss_pred EcchHhhccCHHHHHHHHHHHhC-CcEEEEEE
Confidence 87632 467789999999999 99666543
No 72
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.93 E-value=3.6e-09 Score=75.55 Aligned_cols=80 Identities=14% Similarity=-0.019 Sum_probs=58.8
Q ss_pred HHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCC-CCc---------------------------cCCCCceeEEEE
Q 032292 7 HGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE-DGQ---------------------------SENEGSFDYAFV 58 (143)
Q Consensus 7 ~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~-~~~---------------------------~~~~~~fD~v~~ 58 (143)
...++..+.... +.+|||+|||+|..+..+++.... .+. +...++||+|++
T Consensus 30 ~~~~l~~~~~~~-~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 108 (203)
T 3h2b_A 30 DRVLIEPWATGV-DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLA 108 (203)
T ss_dssp THHHHHHHHHHC-CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEE
T ss_pred HHHHHHHHhccC-CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEe
Confidence 345566665543 789999999999999999887221 000 234588999998
Q ss_pred cCCc-----cchHHHHHHHHhcccCCeEEEEecc
Q 032292 59 DADK-----DNYCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 59 d~~~-----~~~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
.... .+....++.+.++|+|||++++...
T Consensus 109 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 142 (203)
T 3h2b_A 109 WYSLIHMGPGELPDALVALRMAVEDGGGLLMSFF 142 (203)
T ss_dssp ESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 6532 2567889999999999999998653
No 73
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.92 E-value=1.5e-09 Score=80.14 Aligned_cols=67 Identities=12% Similarity=0.220 Sum_probs=53.2
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCCCCc-------------------------------cCCCCceeEEEEcCCc---cc
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQ-------------------------------SENEGSFDYAFVDADK---DN 64 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~~~~-------------------------------~~~~~~fD~v~~d~~~---~~ 64 (143)
++.+|||+|||+|..+..+++....... +...++||+|++.... .+
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~ 123 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYIAS 123 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGCSC
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhhhh
Confidence 6789999999999999999987542100 2335789999987632 45
Q ss_pred hHHHHHHHHhcccCCeEEEEe
Q 032292 65 YCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 65 ~~~~~~~~~~~L~~gG~li~d 85 (143)
....++.+.++|+|||++++.
T Consensus 124 ~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 124 FDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp HHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEE
Confidence 678899999999999999985
No 74
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.92 E-value=1.4e-08 Score=87.12 Aligned_cols=122 Identities=10% Similarity=0.106 Sum_probs=79.4
Q ss_pred HHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------------------
Q 032292 9 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------------ 46 (143)
Q Consensus 9 ~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------------ 46 (143)
+++..++...++.+|||||||+|..+..+++..++...
T Consensus 711 e~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dL 790 (950)
T 3htx_A 711 EYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEF 790 (950)
T ss_dssp HHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSC
T ss_pred HHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhC
Confidence 33444445557899999999999999999988742211
Q ss_pred cCCCCceeEEEEcCCccc-----hHHHHHHHHhcccCCeEEEEeccCC------Ccc---------------ccCCCCCC
Q 032292 47 SENEGSFDYAFVDADKDN-----YCNYHERLMKLLKVGGIAVYDNTLW------GGT---------------VAVPEEQV 100 (143)
Q Consensus 47 ~~~~~~fD~v~~d~~~~~-----~~~~~~~~~~~L~~gG~li~d~~~~------~g~---------------~~~~~~~~ 100 (143)
+...++||+|++.....+ ...+++.+.++|+|| ++++..... .+. ........
T Consensus 791 p~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN~lF~~Lnp~tr~~dPd~~~~~~fRh~DHr 869 (950)
T 3htx_A 791 DSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFNTILQRSTPETQEENNSEPQLPKFRNHDHK 869 (950)
T ss_dssp CTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGHHHHTCC------------CCSSCSCSSCS
T ss_pred CcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhhhhhhhcccccccccccccccccccccCcc
Confidence 112478999998764332 224788899999999 666653221 110 00000011
Q ss_pred CCCcccchHHHHHHHHHHhhcCCCeeEEEeecCCe
Q 032292 101 PDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDG 135 (143)
Q Consensus 101 ~~~~~~~~~~~~~~f~~~l~~~~~~~~~~lp~~~G 135 (143)
-+| .....+.+.+.+....+|.+.+.++|+|
T Consensus 870 FEW----TReEFr~Wae~LAer~GYsVefvGVGDg 900 (950)
T 3htx_A 870 FEW----TREQFNQWASKLGKRHNYSVEFSGVGGS 900 (950)
T ss_dssp CCB----CHHHHHHHHHHHHHHTTEEEEEEEESSC
T ss_pred eee----cHHHHHHHHHHHHHhcCcEEEEEccCCC
Confidence 122 2345777777888888999999999988
No 75
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.91 E-value=3.3e-09 Score=75.68 Aligned_cols=68 Identities=13% Similarity=0.225 Sum_probs=49.7
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCC-CCc-------------------------c------------------------
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPE-DGQ-------------------------S------------------------ 47 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~-~~~-------------------------~------------------------ 47 (143)
.+..+|||+|||+|..+..+++..++ .++ .
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 100 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDPIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYKLKE 100 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCCCTTCEEEECCTTTTSSCCC-----------CHHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCCCCCceEEEccccchhhhhhccccccccccchhhHHHHHh
Confidence 45679999999999999999988752 111 1
Q ss_pred -CCCCceeEEEEcCCcc-------chH-------HHHHHHHhcccCCeEEEEe
Q 032292 48 -ENEGSFDYAFVDADKD-------NYC-------NYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 48 -~~~~~fD~v~~d~~~~-------~~~-------~~~~~~~~~L~~gG~li~d 85 (143)
...++||+|+++.... +.. ..++.+.++|+|||.+++.
T Consensus 101 ~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 153 (201)
T 2plw_A 101 ILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVK 153 (201)
T ss_dssp HHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 1235899999986421 111 2577788999999999874
No 76
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.91 E-value=4.4e-09 Score=79.15 Aligned_cols=81 Identities=23% Similarity=0.320 Sum_probs=60.4
Q ss_pred ChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------------c
Q 032292 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------S 47 (143)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------~ 47 (143)
.+.....+...+...+..+|||+|||+|..++.+++.+.+.++ .
T Consensus 97 ~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 176 (277)
T 1o54_A 97 YPKDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG 176 (277)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC
T ss_pred CHHHHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc
Confidence 3445555556666677889999999999999999998543222 1
Q ss_pred CCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 032292 48 ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 48 ~~~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
...++||+|+++. .+....++.+.+.|+|||++++..
T Consensus 177 ~~~~~~D~V~~~~--~~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 177 FDEKDVDALFLDV--PDPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp CSCCSEEEEEECC--SCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred ccCCccCEEEECC--cCHHHHHHHHHHHcCCCCEEEEEe
Confidence 1246799999975 344577889999999999998753
No 77
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.91 E-value=4.9e-09 Score=75.27 Aligned_cols=79 Identities=15% Similarity=0.165 Sum_probs=57.5
Q ss_pred HHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCC----C------------C-c-----------cCCCCceeEEEEcC
Q 032292 9 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE----D------------G-Q-----------SENEGSFDYAFVDA 60 (143)
Q Consensus 9 ~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~----~------------~-~-----------~~~~~~fD~v~~d~ 60 (143)
.++..+....+..+|||||||+|..+..+++.... + + . ....++||+|++..
T Consensus 36 ~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~ 115 (218)
T 3ou2_A 36 AALERLRAGNIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWDAVFFAH 115 (218)
T ss_dssp HHHHHHTTTTSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEEEEEEES
T ss_pred HHHHHHhcCCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCceeEEEEec
Confidence 45555555666789999999999999999887211 0 0 0 12457899999876
Q ss_pred Ccc---c--hHHHHHHHHhcccCCeEEEEecc
Q 032292 61 DKD---N--YCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 61 ~~~---~--~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
... + ....++.+.++|+|||.+++.+.
T Consensus 116 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 116 WLAHVPDDRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 432 1 36678999999999999988654
No 78
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.90 E-value=4.7e-09 Score=81.35 Aligned_cols=68 Identities=19% Similarity=0.124 Sum_probs=52.4
Q ss_pred cCCC--EEEEEeccccHHHHHHHhhCCCCCc--------------------------------------cCCCCceeEEE
Q 032292 18 VNAK--KTIEIGVFTGYSLLLTALTIPEDGQ--------------------------------------SENEGSFDYAF 57 (143)
Q Consensus 18 ~~~~--~vLeiG~g~G~~t~~la~~~~~~~~--------------------------------------~~~~~~fD~v~ 57 (143)
.+++ +|||||||+|..+.++++..+. .+ ....++||+|+
T Consensus 86 p~p~~~rVLdIG~G~G~la~~la~~~p~-~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 164 (317)
T 3gjy_A 86 QDASKLRITHLGGGACTMARYFADVYPQ-SRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVII 164 (317)
T ss_dssp SCGGGCEEEEESCGGGHHHHHHHHHSTT-CEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEE
T ss_pred CCCCCCEEEEEECCcCHHHHHHHHHCCC-cEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEE
Confidence 3455 9999999999999999987653 12 11257899999
Q ss_pred EcCCccc-------hHHHHHHHHhcccCCeEEEEec
Q 032292 58 VDADKDN-------YCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 58 ~d~~~~~-------~~~~~~~~~~~L~~gG~li~d~ 86 (143)
+|..... ..++++.+.++|+|||++++..
T Consensus 165 ~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 165 RDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp ECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 9864321 1578999999999999998864
No 79
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.90 E-value=6.8e-09 Score=74.74 Aligned_cols=71 Identities=17% Similarity=0.176 Sum_probs=53.5
Q ss_pred hcCCCEEEEEeccccHHHHHHHhhCCC-CCc-----------------------------c-CCCCceeEEEEcCC--cc
Q 032292 17 LVNAKKTIEIGVFTGYSLLLTALTIPE-DGQ-----------------------------S-ENEGSFDYAFVDAD--KD 63 (143)
Q Consensus 17 ~~~~~~vLeiG~g~G~~t~~la~~~~~-~~~-----------------------------~-~~~~~fD~v~~d~~--~~ 63 (143)
..++.+|||||||+|..+..+++.... .+. + ....+||+|++... ..
T Consensus 50 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~~~ 129 (227)
T 3e8s_A 50 GRQPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALLHQ 129 (227)
T ss_dssp HTCCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCCSS
T ss_pred cCCCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhhhh
Confidence 446799999999999999999876211 000 1 22445999998753 34
Q ss_pred chHHHHHHHHhcccCCeEEEEecc
Q 032292 64 NYCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 64 ~~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
+....++.+.++|+|||++++...
T Consensus 130 ~~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 130 DIIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp CCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred hHHHHHHHHHHHhCCCeEEEEEec
Confidence 667899999999999999998754
No 80
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.90 E-value=1.8e-09 Score=79.88 Aligned_cols=71 Identities=17% Similarity=0.185 Sum_probs=54.0
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc--------------------------------cCCCCceeEEEEcCCc---
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ--------------------------------SENEGSFDYAFVDADK--- 62 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~--------------------------------~~~~~~fD~v~~d~~~--- 62 (143)
.++.+|||||||+|..+..+++....... +...++||+|++....
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 133 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRDAILAL 133 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEESCGGGS
T ss_pred CCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHHHHHhc
Confidence 45679999999999999999987421000 2236789999987532
Q ss_pred --cchHHHHHHHHhcccCCeEEEEeccC
Q 032292 63 --DNYCNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 63 --~~~~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
.+....++++.++|+|||.+++.+..
T Consensus 134 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (266)
T 3ujc_A 134 SLENKNKLFQKCYKWLKPTGTLLITDYC 161 (266)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ChHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 34567889999999999999987653
No 81
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.90 E-value=2.3e-09 Score=82.43 Aligned_cols=78 Identities=24% Similarity=0.292 Sum_probs=57.6
Q ss_pred hHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------c--C
Q 032292 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------S--E 48 (143)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------~--~ 48 (143)
+.....+...+...++.+|||||||+|..+..+++..+..++ . .
T Consensus 61 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~ 140 (317)
T 1dl5_A 61 PSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVP 140 (317)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG
T ss_pred HHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccc
Confidence 445555555666677899999999999999999987653222 1 1
Q ss_pred CCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 032292 49 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 49 ~~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
..++||+|+++....... +.+.+.|+|||++++.
T Consensus 141 ~~~~fD~Iv~~~~~~~~~---~~~~~~LkpgG~lvi~ 174 (317)
T 1dl5_A 141 EFSPYDVIFVTVGVDEVP---ETWFTQLKEGGRVIVP 174 (317)
T ss_dssp GGCCEEEEEECSBBSCCC---HHHHHHEEEEEEEEEE
T ss_pred cCCCeEEEEEcCCHHHHH---HHHHHhcCCCcEEEEE
Confidence 246899999987544433 5678899999999986
No 82
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.89 E-value=1.9e-09 Score=78.69 Aligned_cols=70 Identities=17% Similarity=0.230 Sum_probs=53.1
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc---------------------------------cCCCCceeEEEEcCCccc
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------------------SENEGSFDYAFVDADKDN 64 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------------------~~~~~~fD~v~~d~~~~~ 64 (143)
.++.+|||||||+|..+..+++..+. .+ ....++||+|++......
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~ 121 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPE-ATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKYDMVVSALSIHH 121 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTT-CEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCEEEEEEESCGGG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCC-CeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCceEEEEeCcccc
Confidence 45789999999999999999998753 11 112378999999764321
Q ss_pred -----hHHHHHHHHhcccCCeEEEEeccC
Q 032292 65 -----YCNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 65 -----~~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
....++++.++|+|||++++.+..
T Consensus 122 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 150 (234)
T 3dtn_A 122 LEDEDKKELYKRSYSILKESGIFINADLV 150 (234)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 224789999999999999986644
No 83
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.89 E-value=4.4e-09 Score=75.67 Aligned_cols=71 Identities=18% Similarity=0.210 Sum_probs=53.1
Q ss_pred hhcCCCEEEEEeccccHHHHHHHhhCCC-CCc-------------------------cCCCCceeEEEEcCCcc-----c
Q 032292 16 RLVNAKKTIEIGVFTGYSLLLTALTIPE-DGQ-------------------------SENEGSFDYAFVDADKD-----N 64 (143)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~t~~la~~~~~-~~~-------------------------~~~~~~fD~v~~d~~~~-----~ 64 (143)
...++.+|||||||+|..+..+++.... .+. ....++||+|++..... +
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~~ 119 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRLGRPVRTMLFHQLDAIDAYDAVWAHACLLHVPRDE 119 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEECCGGGCCCCSCEEEEEECSCGGGSCHHH
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhcCCceEEeeeccCCCCCcEEEEEecCchhhcCHHH
Confidence 3445789999999999999999886211 000 12467899999876332 4
Q ss_pred hHHHHHHHHhcccCCeEEEEec
Q 032292 65 YCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 65 ~~~~~~~~~~~L~~gG~li~d~ 86 (143)
....++.+.++|+|||++++..
T Consensus 120 ~~~~l~~~~~~LkpgG~l~~~~ 141 (211)
T 3e23_A 120 LADVLKLIWRALKPGGLFYASY 141 (211)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEEE
Confidence 5578899999999999999863
No 84
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.89 E-value=2e-08 Score=80.35 Aligned_cols=84 Identities=21% Similarity=0.216 Sum_probs=61.7
Q ss_pred ChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------c------
Q 032292 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------S------ 47 (143)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------~------ 47 (143)
......++..++...+..+|||+|||+|..|..+++..+. +. .
T Consensus 231 qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~ 309 (429)
T 1sqg_A 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQ 309 (429)
T ss_dssp CCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHH
T ss_pred eCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchh
Confidence 3455666777777777889999999999999999998763 22 0
Q ss_pred -CCCCceeEEEEcCCc---------cc----------------hHHHHHHHHhcccCCeEEEEeccC
Q 032292 48 -ENEGSFDYAFVDADK---------DN----------------YCNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 48 -~~~~~fD~v~~d~~~---------~~----------------~~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
...++||+|++|..- .+ +...++.+.++|+|||++++....
T Consensus 310 ~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 310 WCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 (429)
T ss_dssp HHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESC
T ss_pred hcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 113679999998521 00 135688888999999999986543
No 85
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.89 E-value=1.6e-09 Score=82.64 Aligned_cols=73 Identities=15% Similarity=0.010 Sum_probs=52.4
Q ss_pred hcCCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------------cCCCCceeEEEEcC
Q 032292 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------SENEGSFDYAFVDA 60 (143)
Q Consensus 17 ~~~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------~~~~~~fD~v~~d~ 60 (143)
..++.+|||||||+|..+..+|....+... ....++||+|++..
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~ 195 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSNG 195 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECCS
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEECC
Confidence 456789999999999999998633222221 11237899999865
Q ss_pred Ccc---c---hHHHHHHHHhcccCCeEEEEeccCC
Q 032292 61 DKD---N---YCNYHERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 61 ~~~---~---~~~~~~~~~~~L~~gG~li~d~~~~ 89 (143)
... + ....++++.++|+|||++++.+...
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 321 2 2346899999999999999977543
No 86
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.89 E-value=4.4e-09 Score=75.33 Aligned_cols=65 Identities=17% Similarity=0.122 Sum_probs=52.4
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------cCCCCceeEEEEcCCcc
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------------------SENEGSFDYAFVDADKD 63 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------------------~~~~~~fD~v~~d~~~~ 63 (143)
+..+|||+|||+|..+..+++..+. .+ ....++||+|++++. .
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~-~ 142 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPE-AHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAF-A 142 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTT-SEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSCS-S
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEecc-C
Confidence 3789999999999999999988653 11 112468999998753 5
Q ss_pred chHHHHHHHHhcccCCeEEEEe
Q 032292 64 NYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 64 ~~~~~~~~~~~~L~~gG~li~d 85 (143)
++...++.+.++|+|||++++.
T Consensus 143 ~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 143 SLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp SHHHHHHHHTTSEEEEEEEEEE
T ss_pred CHHHHHHHHHHhcCCCcEEEEE
Confidence 6788999999999999999875
No 87
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.88 E-value=5.1e-09 Score=80.71 Aligned_cols=83 Identities=23% Similarity=0.256 Sum_probs=60.8
Q ss_pred hHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------------cC
Q 032292 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------SE 48 (143)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------~~ 48 (143)
.....++..++...+..+|||+|||+|..|..+|+.+++.++ +.
T Consensus 104 d~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~ 183 (315)
T 1ixk_A 104 EASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE 183 (315)
T ss_dssp CHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG
T ss_pred CHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc
Confidence 344556666666777889999999999999999998754332 11
Q ss_pred CCCceeEEEEcCCc------c-c------------------hHHHHHHHHhcccCCeEEEEecc
Q 032292 49 NEGSFDYAFVDADK------D-N------------------YCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 49 ~~~~fD~v~~d~~~------~-~------------------~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
..++||+|++|+.- . + ....++.+.++|+|||++++...
T Consensus 184 ~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 184 LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 24689999998421 0 0 13678888999999999998654
No 88
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.88 E-value=7.6e-09 Score=73.27 Aligned_cols=74 Identities=16% Similarity=0.195 Sum_probs=53.2
Q ss_pred HHHHhhcCCCEEEEEeccccHHHHHHHhhCCC-CCc-------------------------------cCCCCceeEEEEc
Q 032292 12 AMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE-DGQ-------------------------------SENEGSFDYAFVD 59 (143)
Q Consensus 12 ~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~-~~~-------------------------------~~~~~~fD~v~~d 59 (143)
..++...++.+|||+|||+|..+..+++.... .+. ....++||+|++.
T Consensus 25 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~ 104 (199)
T 2xvm_A 25 LEAVKVVKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFILST 104 (199)
T ss_dssp HHHTTTSCSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCCEEEEEEE
T ss_pred HHHhhccCCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCCceEEEEc
Confidence 33444557789999999999999999876210 000 1116789999987
Q ss_pred CCc-----cchHHHHHHHHhcccCCeEEEEe
Q 032292 60 ADK-----DNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 60 ~~~-----~~~~~~~~~~~~~L~~gG~li~d 85 (143)
... .+....++.+.++|+|||.+++-
T Consensus 105 ~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 135 (199)
T 2xvm_A 105 VVLMFLEAKTIPGLIANMQRCTKPGGYNLIV 135 (199)
T ss_dssp SCGGGSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 532 25667899999999999997653
No 89
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.88 E-value=3.2e-09 Score=78.34 Aligned_cols=68 Identities=16% Similarity=0.104 Sum_probs=53.5
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------cCCCCceeEEEEcCCc---cc
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------SENEGSFDYAFVDADK---DN 64 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------~~~~~~fD~v~~d~~~---~~ 64 (143)
.++.+|||||||+|..+..+++..+. +. ....++||+|++.... .+
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~ 110 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGV-NVITGIDSDDDMLEKAADRLPNTNFGKADLATWKPAQKADLLYANAVFQWVPD 110 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCT-TSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCCCSSCEEEEEEESCGGGSTT
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHhCCCcEEEECChhhcCccCCcCEEEEeCchhhCCC
Confidence 46789999999999999999988642 11 1135689999987643 35
Q ss_pred hHHHHHHHHhcccCCeEEEEec
Q 032292 65 YCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 65 ~~~~~~~~~~~L~~gG~li~d~ 86 (143)
....++++.++|+|||++++..
T Consensus 111 ~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 111 HLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp HHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCeEEEEEe
Confidence 6778999999999999998864
No 90
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.88 E-value=4.7e-09 Score=75.13 Aligned_cols=82 Identities=11% Similarity=0.076 Sum_probs=56.4
Q ss_pred HHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc---------------------------------cCCCCc
Q 032292 6 IHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------------------SENEGS 52 (143)
Q Consensus 6 ~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------------------~~~~~~ 52 (143)
...+++..+....++.+|||+|||+|..+..++........ +...++
T Consensus 10 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~ 89 (209)
T 2p8j_A 10 QLYRFLKYCNESNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDES 89 (209)
T ss_dssp HHHHHHHHHHHSSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTC
T ss_pred hHHHHHHHHhccCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCc
Confidence 34566766666677899999999999875443333221000 223578
Q ss_pred eeEEEEcCCc-----cchHHHHHHHHhcccCCeEEEEecc
Q 032292 53 FDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 53 fD~v~~d~~~-----~~~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
||+|++.... .+....++.+.++|+|||++++...
T Consensus 90 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 90 MSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp EEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 9999986432 3456688899999999999998754
No 91
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.88 E-value=2.1e-08 Score=80.80 Aligned_cols=84 Identities=17% Similarity=0.200 Sum_probs=60.8
Q ss_pred hHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------------c-
Q 032292 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------S- 47 (143)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------~- 47 (143)
.....++..++...+..+|||+|||+|..|..+++.++..++ +
T Consensus 245 d~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~ 324 (450)
T 2yxl_A 245 EEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPE 324 (450)
T ss_dssp CHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSS
T ss_pred CchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcch
Confidence 345566666677777789999999999999999998764232 1
Q ss_pred -CCCCceeEEEEcCCc--c-------c----------------hHHHHHHHHhcccCCeEEEEeccC
Q 032292 48 -ENEGSFDYAFVDADK--D-------N----------------YCNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 48 -~~~~~fD~v~~d~~~--~-------~----------------~~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
...++||.|++|+.- . + ....++.+.++|+|||.+++....
T Consensus 325 ~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 325 IIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCS 391 (450)
T ss_dssp SSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred hhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 112679999997421 0 0 045688889999999999976543
No 92
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.88 E-value=2.4e-09 Score=77.25 Aligned_cols=78 Identities=21% Similarity=0.218 Sum_probs=55.2
Q ss_pred HHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCC-CC-------------------c----------cCCCCceeEEEE
Q 032292 9 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE-DG-------------------Q----------SENEGSFDYAFV 58 (143)
Q Consensus 9 ~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~-~~-------------------~----------~~~~~~fD~v~~ 58 (143)
+++..+....++.+|||+|||+|..+..+++.... .+ . ....++||+|++
T Consensus 41 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~ 120 (216)
T 3ofk_A 41 QLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLIVV 120 (216)
T ss_dssp HHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEEEE
T ss_pred HHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEEEE
Confidence 34444444556789999999999999999876321 00 0 123578999999
Q ss_pred cCCc---cc---hHHHHHHHHhcccCCeEEEEec
Q 032292 59 DADK---DN---YCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 59 d~~~---~~---~~~~~~~~~~~L~~gG~li~d~ 86 (143)
.... .+ ....++.+.++|+|||++++..
T Consensus 121 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 121 AEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp ESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 7532 12 2466899999999999999854
No 93
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.88 E-value=4.1e-09 Score=77.28 Aligned_cols=68 Identities=18% Similarity=0.170 Sum_probs=50.9
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc--------------------------------c-----CCCCceeEEEEcC
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ--------------------------------S-----ENEGSFDYAFVDA 60 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~--------------------------------~-----~~~~~fD~v~~d~ 60 (143)
.+..+|||+|||+|..+..+++..++.++ . ...++||+|+++.
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~ 155 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADV 155 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECC
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcC
Confidence 45679999999999999999988632221 0 1246899999987
Q ss_pred Cccch-HHHHHHHHhcccCCeEEEEe
Q 032292 61 DKDNY-CNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 61 ~~~~~-~~~~~~~~~~L~~gG~li~d 85 (143)
...+. ...+..+.+.|+|||++++.
T Consensus 156 ~~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 156 AQPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp CCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCccHHHHHHHHHHHHcCCCeEEEEE
Confidence 53332 34577899999999999984
No 94
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.88 E-value=4.6e-09 Score=76.71 Aligned_cols=77 Identities=16% Similarity=0.198 Sum_probs=56.6
Q ss_pred HHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc-------------------------------cCCCCceeEEEE
Q 032292 10 LMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ-------------------------------SENEGSFDYAFV 58 (143)
Q Consensus 10 ~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~-------------------------------~~~~~~fD~v~~ 58 (143)
.+..++...++.+|||||||+|..+..+++....... +...++||+|++
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 113 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYS 113 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEE
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEE
Confidence 3444444457789999999999999999876321100 223578999998
Q ss_pred cCCc---cchHHHHHHHHhcccCCeEEEEec
Q 032292 59 DADK---DNYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 59 d~~~---~~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
.... .+....++.+.++|+|||++++..
T Consensus 114 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 114 SLALHYVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 7532 356778999999999999998853
No 95
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.87 E-value=3.7e-09 Score=79.50 Aligned_cols=81 Identities=10% Similarity=0.106 Sum_probs=58.0
Q ss_pred HHHHHHHhh---cCCCEEEEEeccccHHHHHHHhhCCCCCc--------------------------------cCCCCce
Q 032292 9 QLMAMLLRL---VNAKKTIEIGVFTGYSLLLTALTIPEDGQ--------------------------------SENEGSF 53 (143)
Q Consensus 9 ~~l~~l~~~---~~~~~vLeiG~g~G~~t~~la~~~~~~~~--------------------------------~~~~~~f 53 (143)
+.+..++.. .++.+|||||||+|..+..+++..+.... ....++|
T Consensus 51 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~f 130 (287)
T 1kpg_A 51 AKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPV 130 (287)
T ss_dssp HHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCC
T ss_pred HHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCe
Confidence 344444443 45679999999999999999965432100 1123789
Q ss_pred eEEEEcCCc-----cchHHHHHHHHhcccCCeEEEEeccCC
Q 032292 54 DYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 54 D~v~~d~~~-----~~~~~~~~~~~~~L~~gG~li~d~~~~ 89 (143)
|+|++.... .++...++++.++|+|||++++.+...
T Consensus 131 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 131 DRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp SEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred eEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 999987432 356788999999999999999876553
No 96
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.87 E-value=7e-09 Score=78.67 Aligned_cols=67 Identities=13% Similarity=0.066 Sum_probs=51.7
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc--------------------------------------cCCC------Cce
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ--------------------------------------SENE------GSF 53 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~--------------------------------------~~~~------~~f 53 (143)
.++.+|||||||+|..+..+++.+++..+ +... ++|
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 36789999999999999999976521111 1123 689
Q ss_pred eEEEEcCCc--cchHHHHHHHHhcccCCeEEEE
Q 032292 54 DYAFVDADK--DNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 54 D~v~~d~~~--~~~~~~~~~~~~~L~~gG~li~ 84 (143)
|+|++.... .+....++++.++|+|||++++
T Consensus 115 D~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 115 DMITAVECAHWFDFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred eEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEE
Confidence 999987532 2667889999999999999987
No 97
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.87 E-value=1.2e-08 Score=78.10 Aligned_cols=67 Identities=19% Similarity=0.160 Sum_probs=50.8
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------------cCCCCceeEE
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------------------------SENEGSFDYA 56 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------------------------~~~~~~fD~v 56 (143)
.++++|||||||+|..+..+++..+. .+ +...++||+|
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~-~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 167 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSV-EKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVI 167 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTC-SEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCC-CEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEE
Confidence 46789999999999999999886432 11 1124679999
Q ss_pred EEcCCcc--------chHHHHHHHHhcccCCeEEEEe
Q 032292 57 FVDADKD--------NYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 57 ~~d~~~~--------~~~~~~~~~~~~L~~gG~li~d 85 (143)
++|.... .....++.+.++|+|||++++.
T Consensus 168 i~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 204 (296)
T 1inl_A 168 IIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE 204 (296)
T ss_dssp EEEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 9986432 2257889999999999999986
No 98
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.87 E-value=6.4e-09 Score=74.99 Aligned_cols=68 Identities=10% Similarity=0.033 Sum_probs=49.5
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------cCCCCceeEEEEcCC--
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------------------SENEGSFDYAFVDAD-- 61 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------------------~~~~~~fD~v~~d~~-- 61 (143)
+..+|||+|||+|..++.+++....... +...++||+|+++..
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC
Confidence 6789999999999999987665321100 223468999999865
Q ss_pred ccchHHHHHHHHh--cccCCeEEEEec
Q 032292 62 KDNYCNYHERLMK--LLKVGGIAVYDN 86 (143)
Q Consensus 62 ~~~~~~~~~~~~~--~L~~gG~li~d~ 86 (143)
...+...++.+.+ +|+|||++++..
T Consensus 134 ~~~~~~~l~~l~~~~~L~pgG~l~i~~ 160 (202)
T 2fpo_A 134 RGLLEETINLLEDNGWLADEALIYVES 160 (202)
T ss_dssp TTTHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred CCcHHHHHHHHHhcCccCCCcEEEEEE
Confidence 3355667777765 599999998763
No 99
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.87 E-value=6.7e-09 Score=75.17 Aligned_cols=66 Identities=15% Similarity=0.273 Sum_probs=51.8
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------------c--CCCCceeEEEEcC
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------S--ENEGSFDYAFVDA 60 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------~--~~~~~fD~v~~d~ 60 (143)
+..+|||||||+|..++.+|+..+. .. + ...++||+|+++.
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~-~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPD-INYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTT-SEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEES
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCC-CCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEEC
Confidence 4689999999999999999998763 21 1 2356899999875
Q ss_pred Ccc-----------chHHHHHHHHhcccCCeEEEEe
Q 032292 61 DKD-----------NYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 61 ~~~-----------~~~~~~~~~~~~L~~gG~li~d 85 (143)
... .+...++.+.++|+|||++++.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (214)
T 1yzh_A 120 SDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK 155 (214)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred CCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence 321 2357899999999999999874
No 100
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.86 E-value=3.2e-09 Score=81.39 Aligned_cols=66 Identities=26% Similarity=0.141 Sum_probs=50.6
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCCC--------Cc----------------------c---CCCCceeEEEEcCCccch
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPED--------GQ----------------------S---ENEGSFDYAFVDADKDNY 65 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~~--------~~----------------------~---~~~~~fD~v~~d~~~~~~ 65 (143)
+.++|||||||||..|.++++.-... +. . ....+||+|++|....+.
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~sl 164 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFISL 164 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSCG
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHhhH
Confidence 45799999999999999988762110 00 0 112349999999877777
Q ss_pred HHHHHHHHhcccCCeEEEE
Q 032292 66 CNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 66 ~~~~~~~~~~L~~gG~li~ 84 (143)
...++++.++|+|||.+++
T Consensus 165 ~~vL~e~~rvLkpGG~lv~ 183 (291)
T 3hp7_A 165 NLILPALAKILVDGGQVVA 183 (291)
T ss_dssp GGTHHHHHHHSCTTCEEEE
T ss_pred HHHHHHHHHHcCcCCEEEE
Confidence 8889999999999999987
No 101
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.86 E-value=8.9e-09 Score=73.47 Aligned_cols=79 Identities=11% Similarity=0.043 Sum_probs=54.4
Q ss_pred HHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCC----CC-----------------c-----------cCCCCceeEEE
Q 032292 10 LMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE----DG-----------------Q-----------SENEGSFDYAF 57 (143)
Q Consensus 10 ~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~----~~-----------------~-----------~~~~~~fD~v~ 57 (143)
++..++...++.+|||||||+|..+..+++.... +. . +...++||+|+
T Consensus 20 ~l~~~~~~~~~~~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 99 (202)
T 2kw5_A 20 FLVSVANQIPQGKILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIV 99 (202)
T ss_dssp SHHHHHHHSCSSEEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEE
T ss_pred HHHHHHHhCCCCCEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEE
Confidence 3444444334449999999999999999875211 00 0 22357899999
Q ss_pred EcCCc---cchHHHHHHHHhcccCCeEEEEeccC
Q 032292 58 VDADK---DNYCNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 58 ~d~~~---~~~~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
+...+ .+....++.+.++|+|||++++....
T Consensus 100 ~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 133 (202)
T 2kw5_A 100 SIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFA 133 (202)
T ss_dssp EECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEEC
T ss_pred EEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 86433 23456888999999999999987543
No 102
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.86 E-value=1e-08 Score=73.92 Aligned_cols=80 Identities=20% Similarity=0.176 Sum_probs=55.4
Q ss_pred HHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCC----CC--------------c---------c-CCCCceeEEEEcC
Q 032292 9 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE----DG--------------Q---------S-ENEGSFDYAFVDA 60 (143)
Q Consensus 9 ~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~----~~--------------~---------~-~~~~~fD~v~~d~ 60 (143)
.++..+. ..++.+|||+|||+|..+..+++.... +- . . ...++||+|++..
T Consensus 36 ~~l~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~ 114 (220)
T 3hnr_A 36 DILEDVV-NKSFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVPTSIDTIVSTY 114 (220)
T ss_dssp HHHHHHH-HTCCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCCSCCSEEEEES
T ss_pred HHHHHhh-ccCCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCCCCeEEEEECc
Confidence 4444443 347789999999999999999876211 00 0 0 1127899999986
Q ss_pred Ccc---chH--HHHHHHHhcccCCeEEEEeccCC
Q 032292 61 DKD---NYC--NYHERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 61 ~~~---~~~--~~~~~~~~~L~~gG~li~d~~~~ 89 (143)
... +.. ..++++.+.|+|||.+++.+..+
T Consensus 115 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 148 (220)
T 3hnr_A 115 AFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIF 148 (220)
T ss_dssp CGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECB
T ss_pred chhcCChHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 432 222 37899999999999999875443
No 103
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.86 E-value=4.3e-09 Score=78.53 Aligned_cols=77 Identities=19% Similarity=0.107 Sum_probs=57.8
Q ss_pred HHHHHHHHhhc-CCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------c--CC
Q 032292 8 GQLMAMLLRLV-NAKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------------------S--EN 49 (143)
Q Consensus 8 ~~~l~~l~~~~-~~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------------------~--~~ 49 (143)
+.+|..++... ++.+|||+|||+|..++.+++..+.... . ..
T Consensus 37 ~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~ 116 (259)
T 3lpm_A 37 AVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIP 116 (259)
T ss_dssp HHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSC
T ss_pred HHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhc
Confidence 56777777776 7899999999999999999987552100 1 22
Q ss_pred CCceeEEEEcCCc-----------------------cchHHHHHHHHhcccCCeEEEE
Q 032292 50 EGSFDYAFVDADK-----------------------DNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 50 ~~~fD~v~~d~~~-----------------------~~~~~~~~~~~~~L~~gG~li~ 84 (143)
.++||+|+++..- ..+...++.+.++|+|||++++
T Consensus 117 ~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 174 (259)
T 3lpm_A 117 KERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF 174 (259)
T ss_dssp TTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred cCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE
Confidence 5789999996321 1234578888999999999987
No 104
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.86 E-value=8.7e-09 Score=77.35 Aligned_cols=73 Identities=22% Similarity=0.135 Sum_probs=53.6
Q ss_pred HHhhcCCCEEEEEeccccHHHHHHHhhCCC-CCc--------------------------cCCCCceeEEEEcCCc---c
Q 032292 14 LLRLVNAKKTIEIGVFTGYSLLLTALTIPE-DGQ--------------------------SENEGSFDYAFVDADK---D 63 (143)
Q Consensus 14 l~~~~~~~~vLeiG~g~G~~t~~la~~~~~-~~~--------------------------~~~~~~fD~v~~d~~~---~ 63 (143)
.+...++.+|||||||+|..+..+++.... .+. ....++||+|++.... .
T Consensus 52 ~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~ 131 (279)
T 3ccf_A 52 LLNPQPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRVDKPLDAVFSNAMLHWVK 131 (279)
T ss_dssp HHCCCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCCSSCEEEEEEESCGGGCS
T ss_pred HhCCCCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCcCCCcCEEEEcchhhhCc
Confidence 334456789999999999999999872110 000 1124689999987643 4
Q ss_pred chHHHHHHHHhcccCCeEEEEec
Q 032292 64 NYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 64 ~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
+....++++.++|+|||++++..
T Consensus 132 d~~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 132 EPEAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CHHHHHHHHHHhcCCCcEEEEEe
Confidence 56788999999999999998854
No 105
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.86 E-value=3.3e-08 Score=73.81 Aligned_cols=79 Identities=18% Similarity=0.167 Sum_probs=57.8
Q ss_pred HHHHHHHhh-cCCCEEEEEeccccHHHHHHHhhCCCCCc--------------------------------cCCCCceeE
Q 032292 9 QLMAMLLRL-VNAKKTIEIGVFTGYSLLLTALTIPEDGQ--------------------------------SENEGSFDY 55 (143)
Q Consensus 9 ~~l~~l~~~-~~~~~vLeiG~g~G~~t~~la~~~~~~~~--------------------------------~~~~~~fD~ 55 (143)
..+..+... .++.+|||+|||+|..++.+++... ... ....++||+
T Consensus 109 ~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~~~~fD~ 187 (254)
T 2nxc_A 109 LALKALARHLRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDL 187 (254)
T ss_dssp HHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEE
T ss_pred HHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCcCCCCCE
Confidence 344444433 4678999999999999999887533 100 122568999
Q ss_pred EEEcCCccchHHHHHHHHhcccCCeEEEEeccC
Q 032292 56 AFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 56 v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
|+++.........++.+.++|+|||++++..+.
T Consensus 188 Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 188 LVANLYAELHAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp EEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEECCcHHHHHHHHHHHHHHcCCCCEEEEEeec
Confidence 999875555667889999999999999986544
No 106
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.85 E-value=5.1e-09 Score=76.75 Aligned_cols=67 Identities=16% Similarity=0.134 Sum_probs=50.9
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc--------------------------------c----C-CCCceeEEEEcC
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ--------------------------------S----E-NEGSFDYAFVDA 60 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~--------------------------------~----~-~~~~fD~v~~d~ 60 (143)
.+..+|||+|||+|..+..+++..+. ++ . . ..++||+|+.+.
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~ 151 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADK-GIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYEDV 151 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTT-SEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEECC
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCC-cEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEEec
Confidence 35689999999999999999998752 22 0 1 125799999764
Q ss_pred Cc-cchHHHHHHHHhcccCCeEEEEe
Q 032292 61 DK-DNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 61 ~~-~~~~~~~~~~~~~L~~gG~li~d 85 (143)
.. .....+++.+.+.|+|||++++.
T Consensus 152 ~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 152 AQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 32 23366799999999999999884
No 107
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.85 E-value=4.8e-09 Score=72.92 Aligned_cols=74 Identities=11% Similarity=0.021 Sum_probs=56.1
Q ss_pred hhcCCCEEEEEeccccHHHHHHHhhCCC-CCc------------------------cCCCCceeEEEEcCCc---cchHH
Q 032292 16 RLVNAKKTIEIGVFTGYSLLLTALTIPE-DGQ------------------------SENEGSFDYAFVDADK---DNYCN 67 (143)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~t~~la~~~~~-~~~------------------------~~~~~~fD~v~~d~~~---~~~~~ 67 (143)
...+..+|||+|||+|..+..+++.... .+. +...++||+|++.... .+...
T Consensus 14 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~v~~~~~d~~~~~~~~D~v~~~~~l~~~~~~~~ 93 (170)
T 3i9f_A 14 FEGKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEKFDSVITLSDPKEIPDNSVDFILFANSFHDMDDKQH 93 (170)
T ss_dssp HSSCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHHCTTSEEESSGGGSCTTCEEEEEEESCSTTCSCHHH
T ss_pred CcCCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHhCCCcEEEeCCCCCCCCceEEEEEccchhcccCHHH
Confidence 4556789999999999999999887521 000 2345789999987533 35678
Q ss_pred HHHHHHhcccCCeEEEEeccCC
Q 032292 68 YHERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 68 ~~~~~~~~L~~gG~li~d~~~~ 89 (143)
.++++.+.|+|||++++.+...
T Consensus 94 ~l~~~~~~L~pgG~l~~~~~~~ 115 (170)
T 3i9f_A 94 VISEVKRILKDDGRVIIIDWRK 115 (170)
T ss_dssp HHHHHHHHEEEEEEEEEEEECS
T ss_pred HHHHHHHhcCCCCEEEEEEcCc
Confidence 8999999999999999875543
No 108
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.85 E-value=2.6e-08 Score=77.12 Aligned_cols=69 Identities=17% Similarity=0.196 Sum_probs=52.2
Q ss_pred hcCCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------------cCCCCceeE
Q 032292 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------------------------SENEGSFDY 55 (143)
Q Consensus 17 ~~~~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------------------------~~~~~~fD~ 55 (143)
..++++|||||||+|..+..+++..+. .+ +...++||+
T Consensus 114 ~~~~~~VLdiG~G~G~~~~~l~~~~~~-~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDv 192 (321)
T 2pt6_A 114 SKEPKNVLVVGGGDGGIIRELCKYKSV-ENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDV 192 (321)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTCTTC-CEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred CCCCCEEEEEcCCccHHHHHHHHcCCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceE
Confidence 346899999999999999999876432 11 012467999
Q ss_pred EEEcCCcc------ch-HHHHHHHHhcccCCeEEEEec
Q 032292 56 AFVDADKD------NY-CNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 56 v~~d~~~~------~~-~~~~~~~~~~L~~gG~li~d~ 86 (143)
|++|.... .+ ...++.+.++|+|||++++..
T Consensus 193 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 193 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp EEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 99987321 12 678999999999999999863
No 109
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.85 E-value=5.3e-09 Score=79.93 Aligned_cols=82 Identities=11% Similarity=0.102 Sum_probs=58.7
Q ss_pred HHHHHHHHhh---cCCCEEEEEeccccHHHHHHHhhCCCCCc--------------------------------cCCCCc
Q 032292 8 GQLMAMLLRL---VNAKKTIEIGVFTGYSLLLTALTIPEDGQ--------------------------------SENEGS 52 (143)
Q Consensus 8 ~~~l~~l~~~---~~~~~vLeiG~g~G~~t~~la~~~~~~~~--------------------------------~~~~~~ 52 (143)
.+.+..++.. .+..+|||||||+|..+..+++..+.... ...+++
T Consensus 76 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 155 (318)
T 2fk8_A 76 YAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEP 155 (318)
T ss_dssp HHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCC
Confidence 3444455443 45679999999999999999987431100 112378
Q ss_pred eeEEEEcCCc-----cchHHHHHHHHhcccCCeEEEEeccCC
Q 032292 53 FDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 53 fD~v~~d~~~-----~~~~~~~~~~~~~L~~gG~li~d~~~~ 89 (143)
||+|++.... .++...++++.++|+|||++++.+...
T Consensus 156 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 197 (318)
T 2fk8_A 156 VDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVS 197 (318)
T ss_dssp CSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred cCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 9999987432 456788999999999999999876554
No 110
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.84 E-value=1.2e-08 Score=74.88 Aligned_cols=79 Identities=27% Similarity=0.316 Sum_probs=58.8
Q ss_pred ChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------cC-
Q 032292 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------SE- 48 (143)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------~~- 48 (143)
.+.....+...+...+..+|||+|||+|..+..+++. ..... ..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 154 (248)
T 2yvl_A 76 YPKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEV 154 (248)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCC
T ss_pred cchhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhccc
Confidence 3555666666666667889999999999999999987 21000 11
Q ss_pred CCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 032292 49 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 49 ~~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
..++||+|+++.. +....++.+.++|+|||.+++.
T Consensus 155 ~~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~ 189 (248)
T 2yvl_A 155 PEGIFHAAFVDVR--EPWHYLEKVHKSLMEGAPVGFL 189 (248)
T ss_dssp CTTCBSEEEECSS--CGGGGHHHHHHHBCTTCEEEEE
T ss_pred CCCcccEEEECCc--CHHHHHHHHHHHcCCCCEEEEE
Confidence 3457999999653 4456788999999999999874
No 111
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.84 E-value=2.9e-09 Score=76.09 Aligned_cols=38 Identities=21% Similarity=0.321 Sum_probs=29.1
Q ss_pred hHHHHHHHHHHhh----cCCCEEEEEeccccHHHHHHHhhCC
Q 032292 5 TIHGQLMAMLLRL----VNAKKTIEIGVFTGYSLLLTALTIP 42 (143)
Q Consensus 5 ~~~~~~l~~l~~~----~~~~~vLeiG~g~G~~t~~la~~~~ 42 (143)
+++..++..+... .++.+|||+|||+|..+..+++..+
T Consensus 12 ~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~ 53 (215)
T 4dzr_A 12 PDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACP 53 (215)
T ss_dssp HHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCT
T ss_pred ccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCC
Confidence 4444555555543 5678999999999999999999865
No 112
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.84 E-value=5.2e-09 Score=79.54 Aligned_cols=41 Identities=20% Similarity=0.387 Sum_probs=31.8
Q ss_pred CCceeEEEEcCCc---c------chHHHHHHHHhcccCCeEEEEeccCCC
Q 032292 50 EGSFDYAFVDADK---D------NYCNYHERLMKLLKVGGIAVYDNTLWG 90 (143)
Q Consensus 50 ~~~fD~v~~d~~~---~------~~~~~~~~~~~~L~~gG~li~d~~~~~ 90 (143)
.++||+|++.... . .....++++.++|+|||++++..-.|.
T Consensus 175 ~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~~~~~ 224 (292)
T 3g07_A 175 TPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWS 224 (292)
T ss_dssp CCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHH
T ss_pred CCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEecCCch
Confidence 4689999987642 1 345678999999999999999765554
No 113
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.83 E-value=3.9e-09 Score=80.67 Aligned_cols=72 Identities=14% Similarity=0.153 Sum_probs=53.9
Q ss_pred hcCCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------cCCCCceeEEEEcCC
Q 032292 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------------------SENEGSFDYAFVDAD 61 (143)
Q Consensus 17 ~~~~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------------------~~~~~~fD~v~~d~~ 61 (143)
..+..+|||||||+|..+..+++....... +...++||+|++...
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 194 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNES 194 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCc
Confidence 445789999999999999999987421100 223578999998643
Q ss_pred --ccchHHHHHHHHhcccCCeEEEEeccC
Q 032292 62 --KDNYCNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 62 --~~~~~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
+.+....++.+.++|+|||++++.+..
T Consensus 195 l~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 223 (312)
T 3vc1_A 195 TMYVDLHDLFSEHSRFLKVGGRYVTITGC 223 (312)
T ss_dssp GGGSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hhhCCHHHHHHHHHHHcCCCcEEEEEEcc
Confidence 224678899999999999999876543
No 114
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.83 E-value=1.3e-08 Score=74.33 Aligned_cols=76 Identities=13% Similarity=0.167 Sum_probs=55.5
Q ss_pred HHHHHh-hcCCCEEEEEeccccHHHHHHHhhCCC-CCc-----------------------------cCCCCceeEEEEc
Q 032292 11 MAMLLR-LVNAKKTIEIGVFTGYSLLLTALTIPE-DGQ-----------------------------SENEGSFDYAFVD 59 (143)
Q Consensus 11 l~~l~~-~~~~~~vLeiG~g~G~~t~~la~~~~~-~~~-----------------------------~~~~~~fD~v~~d 59 (143)
+..+.. ..++.+|||||||+|..+..+++.... .+. +...++||+|++.
T Consensus 44 ~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 123 (242)
T 3l8d_A 44 IPFFEQYVKKEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAI 123 (242)
T ss_dssp HHHHHHHSCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEE
T ss_pred HHHHHHHcCCCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEc
Confidence 333433 235789999999999999999886211 000 2346789999987
Q ss_pred CCc---cchHHHHHHHHhcccCCeEEEEec
Q 032292 60 ADK---DNYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 60 ~~~---~~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
... .+....++.+.++|+|||++++..
T Consensus 124 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 124 NSLEWTEEPLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp SCTTSSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ChHhhccCHHHHHHHHHHHhCCCeEEEEEE
Confidence 532 456678999999999999998865
No 115
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.83 E-value=6e-09 Score=76.53 Aligned_cols=79 Identities=20% Similarity=0.264 Sum_probs=56.1
Q ss_pred ChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc---------------------------------cCC-
Q 032292 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------------------SEN- 49 (143)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------------------~~~- 49 (143)
.+.....+..++...+..+|||||||+|+.+..+++..+.... ...
T Consensus 76 ~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 155 (235)
T 1jg1_A 76 APHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPP 155 (235)
T ss_dssp CHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG
T ss_pred cHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCC
Confidence 3455555555666667889999999999999999988641100 111
Q ss_pred CCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 032292 50 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 50 ~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
..+||+|+++....... +.+.+.|+|||++++.
T Consensus 156 ~~~fD~Ii~~~~~~~~~---~~~~~~L~pgG~lvi~ 188 (235)
T 1jg1_A 156 KAPYDVIIVTAGAPKIP---EPLIEQLKIGGKLIIP 188 (235)
T ss_dssp GCCEEEEEECSBBSSCC---HHHHHTEEEEEEEEEE
T ss_pred CCCccEEEECCcHHHHH---HHHHHhcCCCcEEEEE
Confidence 23599999987654433 3678999999999875
No 116
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.83 E-value=1.3e-08 Score=76.51 Aligned_cols=69 Identities=14% Similarity=0.056 Sum_probs=52.7
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCC-CCc---------------------------------c-CCCCceeEEEEcCCc-
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPE-DGQ---------------------------------S-ENEGSFDYAFVDADK- 62 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~-~~~---------------------------------~-~~~~~fD~v~~d~~~- 62 (143)
++.+|||||||+|..+..+++.... .+. + ...++||+|++....
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~ 147 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLE 147 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCGG
T ss_pred CCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchhh
Confidence 3579999999999999999887211 000 1 346789999987643
Q ss_pred --cchHHHHHHHHhcccCCeEEEEecc
Q 032292 63 --DNYCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 63 --~~~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
.+....++.+.++|+|||++++...
T Consensus 148 ~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 148 WVADPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp GCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cccCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 3567889999999999999988653
No 117
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.83 E-value=2.3e-08 Score=70.25 Aligned_cols=76 Identities=17% Similarity=0.123 Sum_probs=53.9
Q ss_pred HHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCC-CCc---------------------------cCCCCceeEEEEcC
Q 032292 9 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE-DGQ---------------------------SENEGSFDYAFVDA 60 (143)
Q Consensus 9 ~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~-~~~---------------------------~~~~~~fD~v~~d~ 60 (143)
+++..+ ..++.+|||+|||+|..+..+++.... .+. +...++||+|++..
T Consensus 38 ~~l~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~ 115 (195)
T 3cgg_A 38 RLIDAM--APRGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAG 115 (195)
T ss_dssp HHHHHH--SCTTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECC
T ss_pred HHHHHh--ccCCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECC
Confidence 455544 346789999999999999999876211 000 12346899999974
Q ss_pred Cc------cchHHHHHHHHhcccCCeEEEEec
Q 032292 61 DK------DNYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 61 ~~------~~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
.. .+....++.+.++|+|||++++..
T Consensus 116 ~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~ 147 (195)
T 3cgg_A 116 NVMGFLAEDGREPALANIHRALGADGRAVIGF 147 (195)
T ss_dssp CCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cHHhhcChHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 32 223567889999999999998853
No 118
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.82 E-value=2.3e-08 Score=73.58 Aligned_cols=79 Identities=16% Similarity=0.191 Sum_probs=54.8
Q ss_pred HHHHHHHHhh---cCCCEEEEEeccccHHHHHHHhhCCC-CCc------------------------------cCCCCce
Q 032292 8 GQLMAMLLRL---VNAKKTIEIGVFTGYSLLLTALTIPE-DGQ------------------------------SENEGSF 53 (143)
Q Consensus 8 ~~~l~~l~~~---~~~~~vLeiG~g~G~~t~~la~~~~~-~~~------------------------------~~~~~~f 53 (143)
..++..+... .++.+|||+|||+|..+..+++.... .+. ....++|
T Consensus 27 ~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~f 106 (252)
T 1wzn_A 27 IDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEF 106 (252)
T ss_dssp HHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCE
T ss_pred HHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCc
Confidence 4555555543 34689999999999999999876211 000 1124689
Q ss_pred eEEEEcCCc------cchHHHHHHHHhcccCCeEEEEec
Q 032292 54 DYAFVDADK------DNYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 54 D~v~~d~~~------~~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
|+|++.... .+....++.+.++|+|||+++++-
T Consensus 107 D~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 107 DAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp EEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 999975321 234567889999999999999863
No 119
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.82 E-value=1.1e-08 Score=73.70 Aligned_cols=70 Identities=13% Similarity=0.078 Sum_probs=49.9
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCC---------------------C----c------------cC-CCCc-eeEEEE
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPED---------------------G----Q------------SE-NEGS-FDYAFV 58 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~---------------------~----~------------~~-~~~~-fD~v~~ 58 (143)
.+..+|||+|||+|..++.++...... + . +. ..++ ||+|++
T Consensus 52 ~~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 52 IHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred cCCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 367899999999999999866553210 0 0 11 1457 999999
Q ss_pred cCC--ccchHHHHHHH--HhcccCCeEEEEecc
Q 032292 59 DAD--KDNYCNYHERL--MKLLKVGGIAVYDNT 87 (143)
Q Consensus 59 d~~--~~~~~~~~~~~--~~~L~~gG~li~d~~ 87 (143)
+.. ...+...++.+ .++|+|||++++...
T Consensus 132 ~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~ 164 (201)
T 2ift_A 132 DPPFHFNLAEQAISLLCENNWLKPNALIYVETE 164 (201)
T ss_dssp CCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CCCCCCccHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 865 23456677777 568999999988643
No 120
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.82 E-value=2e-09 Score=78.68 Aligned_cols=63 Identities=11% Similarity=0.030 Sum_probs=48.2
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCC-CCc----------------------------cCC-CCceeEEEEcCCccchHH
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPE-DGQ----------------------------SEN-EGSFDYAFVDADKDNYCN 67 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~-~~~----------------------------~~~-~~~fD~v~~d~~~~~~~~ 67 (143)
.++.+|||||||+|..+..+++.... .+. +.. +++||+|++.. +...
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~---~~~~ 123 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRR---GPTS 123 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEES---CCSG
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCC---CHHH
Confidence 46789999999999999999987211 000 222 57899999973 3455
Q ss_pred HHHHHHhcccCCeEEE
Q 032292 68 YHERLMKLLKVGGIAV 83 (143)
Q Consensus 68 ~~~~~~~~L~~gG~li 83 (143)
.++.+.++|+|||+++
T Consensus 124 ~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 124 VILRLPELAAPDAHFL 139 (226)
T ss_dssp GGGGHHHHEEEEEEEE
T ss_pred HHHHHHHHcCCCcEEE
Confidence 6778899999999998
No 121
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.82 E-value=5e-09 Score=73.62 Aligned_cols=70 Identities=14% Similarity=0.186 Sum_probs=50.2
Q ss_pred hcCCCEEEEEeccccHHHHHHHhhCCCCCc---------------------------------c------CCCCceeEEE
Q 032292 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------------------S------ENEGSFDYAF 57 (143)
Q Consensus 17 ~~~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------------------~------~~~~~fD~v~ 57 (143)
..++.+|||+|||+|..++.+++....... . ...++||+|+
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 121 (187)
T 2fhp_A 42 YFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVL 121 (187)
T ss_dssp CCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEE
Confidence 346789999999999999988874211000 0 1157899999
Q ss_pred EcCC--ccchHHHHHHH--HhcccCCeEEEEec
Q 032292 58 VDAD--KDNYCNYHERL--MKLLKVGGIAVYDN 86 (143)
Q Consensus 58 ~d~~--~~~~~~~~~~~--~~~L~~gG~li~d~ 86 (143)
++.. .......++.+ .++|+|||++++..
T Consensus 122 ~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~ 154 (187)
T 2fhp_A 122 LDPPYAKQEIVSQLEKMLERQLLTNEAVIVCET 154 (187)
T ss_dssp ECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred ECCCCCchhHHHHHHHHHHhcccCCCCEEEEEe
Confidence 9865 23455667776 78999999998853
No 122
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=98.82 E-value=3.2e-08 Score=74.58 Aligned_cols=74 Identities=18% Similarity=0.150 Sum_probs=53.2
Q ss_pred CCceeEEEEcCCc-cchHHHHHHHHhcccCCeEEEEeccCCCccccCCCCCCCCCcccchHHHHHHHHHHhhcCCCeeEE
Q 032292 50 EGSFDYAFVDADK-DNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLS 128 (143)
Q Consensus 50 ~~~fD~v~~d~~~-~~~~~~~~~~~~~L~~gG~li~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~ 128 (143)
.++||+||+|+++ ..+..+++.+.++|+|||+|++||+.+.+ +| . ..+|+++| ....+....
T Consensus 180 ~~~~dlv~ID~D~Y~~t~~~le~~~p~l~~GGvIv~DD~~~~~--------w~----G-~~~A~~ef----~~~~~~~i~ 242 (257)
T 3tos_A 180 QTVIALAYFDLDLYEPTKAVLEAIRPYLTKGSIVAFDELDNPK--------WP----G-ENIAMRKV----LGLDHAPLR 242 (257)
T ss_dssp TCCEEEEEECCCCHHHHHHHHHHHGGGEEEEEEEEESSTTCTT--------CT----H-HHHHHHHH----TCTTSSCCE
T ss_pred CCceEEEEEcCcccchHHHHHHHHHHHhCCCcEEEEcCCCCCC--------Ch----H-HHHHHHHH----HhhCCCeEE
Confidence 4579999999987 45667899999999999999999974321 11 1 34455555 455667777
Q ss_pred EeecCCeeEEEE
Q 032292 129 HVALGDGITICR 140 (143)
Q Consensus 129 ~lp~~~Gl~~~~ 140 (143)
.+|+..+....+
T Consensus 243 ~~p~~~~~~y~~ 254 (257)
T 3tos_A 243 LLPGRPAPAYLR 254 (257)
T ss_dssp ECTTCSCCEEEE
T ss_pred EccCCCCCEEEE
Confidence 888888776554
No 123
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.82 E-value=9.1e-09 Score=75.97 Aligned_cols=80 Identities=23% Similarity=0.181 Sum_probs=58.7
Q ss_pred hHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc-------------------------------------c
Q 032292 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ-------------------------------------S 47 (143)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~-------------------------------------~ 47 (143)
+.....+...+...+..+|||+|||+|..+..+++.+.+.++ +
T Consensus 82 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~ 161 (258)
T 2pwy_A 82 PKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAE 161 (258)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCC
T ss_pred chHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcC
Confidence 444445555556667889999999999999999988432111 1
Q ss_pred CCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 032292 48 ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 48 ~~~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
...++||+|+++.. +....++.+.++|+|||.+++..
T Consensus 162 ~~~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 162 LEEAAYDGVALDLM--EPWKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp CCTTCEEEEEEESS--CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCcCEEEECCc--CHHHHHHHHHHhCCCCCEEEEEe
Confidence 23467999999753 44577889999999999998743
No 124
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.82 E-value=1e-08 Score=76.77 Aligned_cols=81 Identities=19% Similarity=0.183 Sum_probs=59.3
Q ss_pred ChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc-------------------------------------
Q 032292 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------- 46 (143)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------- 46 (143)
.+.....+...+...+..+|||+|||+|..+..+++.+.+.++
T Consensus 84 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~ 163 (280)
T 1i9g_A 84 YPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLA 163 (280)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGG
T ss_pred cHHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchH
Confidence 4445555555566667889999999999999999986422111
Q ss_pred --cCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 032292 47 --SENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 47 --~~~~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
+...++||+|+++.. +....++.+.++|+|||++++..
T Consensus 164 ~~~~~~~~~D~v~~~~~--~~~~~l~~~~~~L~pgG~l~~~~ 203 (280)
T 1i9g_A 164 DSELPDGSVDRAVLDML--APWEVLDAVSRLLVAGGVLMVYV 203 (280)
T ss_dssp GCCCCTTCEEEEEEESS--CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred hcCCCCCceeEEEECCc--CHHHHHHHHHHhCCCCCEEEEEe
Confidence 112467999999754 44578889999999999998743
No 125
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.82 E-value=1.3e-08 Score=75.18 Aligned_cols=69 Identities=19% Similarity=0.091 Sum_probs=51.9
Q ss_pred hcCCCEEEEEeccccHHHHHHHhhCCC------C---------------Cc-----------cCCCCceeEEEEcCCc--
Q 032292 17 LVNAKKTIEIGVFTGYSLLLTALTIPE------D---------------GQ-----------SENEGSFDYAFVDADK-- 62 (143)
Q Consensus 17 ~~~~~~vLeiG~g~G~~t~~la~~~~~------~---------------~~-----------~~~~~~fD~v~~d~~~-- 62 (143)
..++.+|||||||+|..+..+++.... + .. +..+++||+|++....
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 116 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWHL 116 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchhh
Confidence 346789999999999999999875210 0 00 2235789999987542
Q ss_pred -cchHHHHHHHHhcccCCeEEEEe
Q 032292 63 -DNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 63 -~~~~~~~~~~~~~L~~gG~li~d 85 (143)
.+....++++.++|+|||++++.
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 117 VPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHCCCCcEEEEE
Confidence 35577899999999999999875
No 126
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.82 E-value=1.9e-08 Score=75.63 Aligned_cols=76 Identities=12% Similarity=0.180 Sum_probs=54.0
Q ss_pred HHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCC-CCc------------------------------cCCCCceeEEE
Q 032292 9 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE-DGQ------------------------------SENEGSFDYAF 57 (143)
Q Consensus 9 ~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~-~~~------------------------------~~~~~~fD~v~ 57 (143)
.++..+. ..++.+|||+|||+|..+..+++.... .+. ....++||+|+
T Consensus 111 ~~~~~~~-~~~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~i~ 189 (286)
T 3m70_A 111 DVVDAAK-IISPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENYDFIV 189 (286)
T ss_dssp HHHHHHH-HSCSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCEEEEE
T ss_pred HHHHHhh-ccCCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCCccEEE
Confidence 3444433 347899999999999999999987221 000 11267899999
Q ss_pred EcCCc-----cchHHHHHHHHhcccCCeEEEEe
Q 032292 58 VDADK-----DNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 58 ~d~~~-----~~~~~~~~~~~~~L~~gG~li~d 85 (143)
+.... ......++.+.++|+|||++++-
T Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 190 STVVFMFLNRERVPSIIKNMKEHTNVGGYNLIV 222 (286)
T ss_dssp ECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred EccchhhCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 87632 34557899999999999997653
No 127
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.81 E-value=6.6e-09 Score=76.12 Aligned_cols=67 Identities=24% Similarity=0.226 Sum_probs=50.8
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------------c--CCCCceeEEEEcC
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------S--ENEGSFDYAFVDA 60 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------~--~~~~~fD~v~~d~ 60 (143)
+..+|||||||+|..++.+|+..+.... + ...++||.|++..
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 5679999999999999999998764111 1 3568999999862
Q ss_pred ---Cc--cc------hHHHHHHHHhcccCCeEEEEe
Q 032292 61 ---DK--DN------YCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 61 ---~~--~~------~~~~~~~~~~~L~~gG~li~d 85 (143)
+. .. ....++.+.++|+|||++++.
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~ 149 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMA 149 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEE
Confidence 11 11 135899999999999999774
No 128
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.81 E-value=1.3e-08 Score=73.05 Aligned_cols=68 Identities=19% Similarity=0.157 Sum_probs=47.4
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCC--------C----Cc-----c--CC----------C----CceeEEEEcCCcc-
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPE--------D----GQ-----S--EN----------E----GSFDYAFVDADKD- 63 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~--------~----~~-----~--~~----------~----~~fD~v~~d~~~~- 63 (143)
.+..+|||+|||+|.++..+++.... . +. . .. . ++||+|++|+...
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~ 103 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEEIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDAMAKV 103 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCCCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCC
T ss_pred CCCCEEEEEeecCCHHHHHHHHcCCcEEEEeccccccCCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEecCCCcCC
Confidence 46789999999999999999876110 0 00 0 00 0 4899999986321
Q ss_pred ------c-------hHHHHHHHHhcccCCeEEEEe
Q 032292 64 ------N-------YCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 64 ------~-------~~~~~~~~~~~L~~gG~li~d 85 (143)
+ ....++.+.++|+|||.+++.
T Consensus 104 ~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k 138 (191)
T 3dou_A 104 SGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLK 138 (191)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 1 124567778999999999874
No 129
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.81 E-value=2.5e-08 Score=69.45 Aligned_cols=76 Identities=17% Similarity=0.040 Sum_probs=56.5
Q ss_pred hHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------cCC
Q 032292 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------------------SEN 49 (143)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------------------~~~ 49 (143)
+...+.+.......++.+|||+|||+|..+..+++ +. .+ +..
T Consensus 21 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~--~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~ 97 (183)
T 2yxd_A 21 EEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK--RC-KFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLD 97 (183)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT--TS-SEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGG
T ss_pred HHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh--cC-CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCcccccc
Confidence 34445555555566778999999999999999987 21 11 122
Q ss_pred CCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 032292 50 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 50 ~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
.++||+|+++.. .+....++.+.++ |||.+++..
T Consensus 98 ~~~~D~i~~~~~-~~~~~~l~~~~~~--~gG~l~~~~ 131 (183)
T 2yxd_A 98 KLEFNKAFIGGT-KNIEKIIEILDKK--KINHIVANT 131 (183)
T ss_dssp GCCCSEEEECSC-SCHHHHHHHHHHT--TCCEEEEEE
T ss_pred CCCCcEEEECCc-ccHHHHHHHHhhC--CCCEEEEEe
Confidence 368999999877 6777888888887 999998864
No 130
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.81 E-value=1e-08 Score=73.86 Aligned_cols=79 Identities=15% Similarity=0.096 Sum_probs=56.3
Q ss_pred HHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCC------CCCc---------cCCCCceeEEEEcCC--ccchHHHHHH
Q 032292 9 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIP------EDGQ---------SENEGSFDYAFVDAD--KDNYCNYHER 71 (143)
Q Consensus 9 ~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~------~~~~---------~~~~~~fD~v~~d~~--~~~~~~~~~~ 71 (143)
.++..+....++.+|||||||+|..+..++..+- .... +...++||+|++... ..+....++.
T Consensus 57 ~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~v~~~D~s~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~ 136 (215)
T 2zfu_A 57 RIARDLRQRPASLVVADFGCGDCRLASSIRNPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAVFCLSLMGTNIRDFLEE 136 (215)
T ss_dssp HHHHHHHTSCTTSCEEEETCTTCHHHHHCCSCEEEEESSCSSTTEEESCTTSCSCCTTCEEEEEEESCCCSSCHHHHHHH
T ss_pred HHHHHHhccCCCCeEEEECCcCCHHHHHhhccEEEEeCCCCCceEEEeccccCCCCCCCEeEEEEehhccccCHHHHHHH
Confidence 3555555555678999999999999988752210 0000 234578999998653 2456788999
Q ss_pred HHhcccCCeEEEEecc
Q 032292 72 LMKLLKVGGIAVYDNT 87 (143)
Q Consensus 72 ~~~~L~~gG~li~d~~ 87 (143)
+.++|+|||.+++.+.
T Consensus 137 ~~~~L~~gG~l~i~~~ 152 (215)
T 2zfu_A 137 ANRVLKPGGLLKVAEV 152 (215)
T ss_dssp HHHHEEEEEEEEEEEC
T ss_pred HHHhCCCCeEEEEEEc
Confidence 9999999999988643
No 131
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.81 E-value=4.4e-09 Score=79.18 Aligned_cols=76 Identities=17% Similarity=0.242 Sum_probs=52.8
Q ss_pred HHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------------cCCCCc
Q 032292 9 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------SENEGS 52 (143)
Q Consensus 9 ~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------~~~~~~ 52 (143)
+++...+...+..+|||+|||+|..+..+++.+.+.++ ....++
T Consensus 100 ~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~ 179 (275)
T 1yb2_A 100 SYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQM 179 (275)
T ss_dssp ------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSCC
T ss_pred HHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCCC
Confidence 34444445567789999999999999999987322111 112357
Q ss_pred eeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 032292 53 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 53 fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
||+|+++. .+....++.+.+.|+|||++++..
T Consensus 180 fD~Vi~~~--~~~~~~l~~~~~~LkpgG~l~i~~ 211 (275)
T 1yb2_A 180 YDAVIADI--PDPWNHVQKIASMMKPGSVATFYL 211 (275)
T ss_dssp EEEEEECC--SCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred ccEEEEcC--cCHHHHHHHHHHHcCCCCEEEEEe
Confidence 99999964 345678899999999999998753
No 132
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.81 E-value=1.4e-08 Score=70.22 Aligned_cols=67 Identities=18% Similarity=0.160 Sum_probs=49.6
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------c---CCCCceeEEEEcCC
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------S---ENEGSFDYAFVDAD 61 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------~---~~~~~fD~v~~d~~ 61 (143)
+.++|||+|||+|..+..+++..+. .. + ...++||+|+++..
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~ 119 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE-AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPP 119 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE-EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCC
Confidence 6789999999999999999887432 10 0 01237999999853
Q ss_pred c-cchHHHHHHHH--hcccCCeEEEEec
Q 032292 62 K-DNYCNYHERLM--KLLKVGGIAVYDN 86 (143)
Q Consensus 62 ~-~~~~~~~~~~~--~~L~~gG~li~d~ 86 (143)
. ......++.+. ++|+|||++++..
T Consensus 120 ~~~~~~~~~~~~~~~~~L~~gG~~~~~~ 147 (171)
T 1ws6_A 120 YAMDLAALFGELLASGLVEAGGLYVLQH 147 (171)
T ss_dssp TTSCTTHHHHHHHHHTCEEEEEEEEEEE
T ss_pred CchhHHHHHHHHHhhcccCCCcEEEEEe
Confidence 2 34556677777 9999999998854
No 133
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.81 E-value=1.7e-08 Score=81.85 Aligned_cols=82 Identities=18% Similarity=0.225 Sum_probs=61.1
Q ss_pred HHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------c-CC
Q 032292 6 IHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------------------S-EN 49 (143)
Q Consensus 6 ~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------------------~-~~ 49 (143)
....++..++...++.+|||+|||+|..|+.+|+.++..+. . ..
T Consensus 88 ~ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~ 167 (464)
T 3m6w_A 88 PSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAF 167 (464)
T ss_dssp TTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHH
T ss_pred HHHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhc
Confidence 34456666666777899999999999999999998875443 1 13
Q ss_pred CCceeEEEEcCCc---------cc----------------hHHHHHHHHhcccCCeEEEEecc
Q 032292 50 EGSFDYAFVDADK---------DN----------------YCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 50 ~~~fD~v~~d~~~---------~~----------------~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
.++||.|++|+.- .+ ....++.+.++|+|||+|++...
T Consensus 168 ~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTC 230 (464)
T 3m6w_A 168 GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTC 230 (464)
T ss_dssp CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 5789999998531 00 14577888899999999998643
No 134
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.81 E-value=1.7e-08 Score=75.95 Aligned_cols=80 Identities=16% Similarity=0.164 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHhh--cCCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------c
Q 032292 5 TIHGQLMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------------------S 47 (143)
Q Consensus 5 ~~~~~~l~~l~~~--~~~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------------------~ 47 (143)
|++-.++..+... .++.+|||+|||+|..++.+++..+. .+ .
T Consensus 93 ~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~~-~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~ 171 (276)
T 2b3t_A 93 PDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPD-CEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA 171 (276)
T ss_dssp TTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCTT-SEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG
T ss_pred chHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh
Confidence 4455555555554 45689999999999999999987653 11 1
Q ss_pred CCCCceeEEEEcCCc----------------------------cchHHHHHHHHhcccCCeEEEEe
Q 032292 48 ENEGSFDYAFVDADK----------------------------DNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 48 ~~~~~fD~v~~d~~~----------------------------~~~~~~~~~~~~~L~~gG~li~d 85 (143)
...++||+|+++..- ..+...++.+.++|+|||++++.
T Consensus 172 ~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 172 LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 225689999997210 23466788889999999999885
No 135
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.81 E-value=1.5e-08 Score=71.90 Aligned_cols=69 Identities=12% Similarity=0.118 Sum_probs=50.6
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCC--------Cc-----------------c-C----------------CCCceeE
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPED--------GQ-----------------S-E----------------NEGSFDY 55 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~--------~~-----------------~-~----------------~~~~fD~ 55 (143)
.+..+|||+|||+|..+..+++.++.. ++ . . ..++||+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~fD~ 100 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFLCPADVTDPRTSQRILEVLPGRRADV 100 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCTTCEEECSCCTTSHHHHHHHHHHSGGGCEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCCCCeEEEeccCCCHHHHHHHHHhcCCCCCcE
Confidence 457899999999999999999987531 22 1 1 1247999
Q ss_pred EEEcCCcc-------ch-------HHHHHHHHhcccCCeEEEEec
Q 032292 56 AFVDADKD-------NY-------CNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 56 v~~d~~~~-------~~-------~~~~~~~~~~L~~gG~li~d~ 86 (143)
|+++.... +. ...++.+.++|+|||.+++..
T Consensus 101 V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 101 ILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp EEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 99875211 11 356888899999999998853
No 136
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.80 E-value=7.7e-09 Score=75.25 Aligned_cols=74 Identities=23% Similarity=0.342 Sum_probs=53.2
Q ss_pred HHHHHHH-hhcCCCEEEEEeccccHHHHHHHhhCC----CCCc---------------------c---------------
Q 032292 9 QLMAMLL-RLVNAKKTIEIGVFTGYSLLLTALTIP----EDGQ---------------------S--------------- 47 (143)
Q Consensus 9 ~~l~~l~-~~~~~~~vLeiG~g~G~~t~~la~~~~----~~~~---------------------~--------------- 47 (143)
.++..+. ...+..+|||||||+|+.+..+++... +.++ .
T Consensus 69 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 148 (227)
T 2pbf_A 69 LSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKN 148 (227)
T ss_dssp HHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECC
T ss_pred HHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECC
Confidence 3344443 355678999999999999999998874 2221 0
Q ss_pred ---------CCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 032292 48 ---------ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 48 ---------~~~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
...++||+|+++...... ++.+.++|+|||++++.
T Consensus 149 ~~~~~~~~~~~~~~fD~I~~~~~~~~~---~~~~~~~LkpgG~lv~~ 192 (227)
T 2pbf_A 149 IYQVNEEEKKELGLFDAIHVGASASEL---PEILVDLLAENGKLIIP 192 (227)
T ss_dssp GGGCCHHHHHHHCCEEEEEECSBBSSC---CHHHHHHEEEEEEEEEE
T ss_pred hHhcccccCccCCCcCEEEECCchHHH---HHHHHHhcCCCcEEEEE
Confidence 112579999998765443 46788999999999874
No 137
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.79 E-value=1.6e-08 Score=75.28 Aligned_cols=67 Identities=18% Similarity=0.143 Sum_probs=50.9
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCC-CCc--------------------------cCCCCceeEEEEcCCc----cchHH
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPE-DGQ--------------------------SENEGSFDYAFVDADK----DNYCN 67 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~-~~~--------------------------~~~~~~fD~v~~d~~~----~~~~~ 67 (143)
++.+|||||||+|..+..+++.... .+. +...++||+|++.... .+...
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~ 133 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVENKDK 133 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCSCHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhccccHHH
Confidence 6789999999999999999876211 000 2235789999986532 34577
Q ss_pred HHHHHHhcccCCeEEEEe
Q 032292 68 YHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 68 ~~~~~~~~L~~gG~li~d 85 (143)
.++++.++|+|||++++.
T Consensus 134 ~l~~~~~~LkpgG~l~~~ 151 (260)
T 2avn_A 134 AFSEIRRVLVPDGLLIAT 151 (260)
T ss_dssp HHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHcCCCeEEEEE
Confidence 899999999999999875
No 138
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.79 E-value=9.5e-09 Score=74.70 Aligned_cols=74 Identities=22% Similarity=0.297 Sum_probs=52.7
Q ss_pred HHHHHHH-hhcCCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------------
Q 032292 9 QLMAMLL-RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------------- 46 (143)
Q Consensus 9 ~~l~~l~-~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------------- 46 (143)
.++..+. ...+..+|||||||+|+.+..+++..++.++
T Consensus 66 ~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 145 (226)
T 1i1n_A 66 YALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG 145 (226)
T ss_dssp HHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC
T ss_pred HHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC
Confidence 3444443 2456789999999999999999987632221
Q ss_pred cCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 032292 47 SENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 47 ~~~~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
....++||+|+++...... ++.+.++|+|||++++.
T Consensus 146 ~~~~~~fD~i~~~~~~~~~---~~~~~~~LkpgG~lv~~ 181 (226)
T 1i1n_A 146 YAEEAPYDAIHVGAAAPVV---PQALIDQLKPGGRLILP 181 (226)
T ss_dssp CGGGCCEEEEEECSBBSSC---CHHHHHTEEEEEEEEEE
T ss_pred cccCCCcCEEEECCchHHH---HHHHHHhcCCCcEEEEE
Confidence 0124579999998754433 45778999999999885
No 139
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.79 E-value=8.9e-09 Score=75.75 Aligned_cols=70 Identities=7% Similarity=0.128 Sum_probs=52.2
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCC--Cc------------------------------cCCCCceeEEEEcCCcc--
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPED--GQ------------------------------SENEGSFDYAFVDADKD-- 63 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~--~~------------------------------~~~~~~fD~v~~d~~~~-- 63 (143)
.++.+|||||||+|..+..+++..... +. +...++||+|++.....
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 171 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAIYL 171 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGGGS
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcchhhhC
Confidence 357899999999999999988764210 00 22357899999876432
Q ss_pred ---chHHHHHHHHhcccCCeEEEEecc
Q 032292 64 ---NYCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 64 ---~~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
+....++.+.++|+|||++++.+.
T Consensus 172 ~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 172 TDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 345688999999999999988653
No 140
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.79 E-value=1.6e-08 Score=80.01 Aligned_cols=82 Identities=18% Similarity=0.152 Sum_probs=58.3
Q ss_pred ChHHHHHHHHHHhhc-----CCCEEEEEeccccHHHHHHHhhCCC-CCc-------------------------------
Q 032292 4 LTIHGQLMAMLLRLV-----NAKKTIEIGVFTGYSLLLTALTIPE-DGQ------------------------------- 46 (143)
Q Consensus 4 ~~~~~~~l~~l~~~~-----~~~~vLeiG~g~G~~t~~la~~~~~-~~~------------------------------- 46 (143)
.+.+..++..+.... ++.+|||+|||+|..++.+++.... .+.
T Consensus 213 d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~ 292 (381)
T 3dmg_A 213 DPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEA 292 (381)
T ss_dssp CHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT
T ss_pred CHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhc
Confidence 455566677766543 5679999999999999999986211 000
Q ss_pred cCCCCceeEEEEcCC--------ccchHHHHHHHHhcccCCeEEEEe
Q 032292 47 SENEGSFDYAFVDAD--------KDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 47 ~~~~~~fD~v~~d~~--------~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
....++||+|+++.. .......++.+.++|+|||++++.
T Consensus 293 ~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv 339 (381)
T 3dmg_A 293 LTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLV 339 (381)
T ss_dssp SCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 112368999999732 223457889999999999999873
No 141
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.79 E-value=1.8e-08 Score=73.45 Aligned_cols=78 Identities=15% Similarity=0.151 Sum_probs=55.0
Q ss_pred HHHHHHHHhhc--CCCEEEEEeccccHHHHHHHhhCCC----CC-----------------c----------cCCCCcee
Q 032292 8 GQLMAMLLRLV--NAKKTIEIGVFTGYSLLLTALTIPE----DG-----------------Q----------SENEGSFD 54 (143)
Q Consensus 8 ~~~l~~l~~~~--~~~~vLeiG~g~G~~t~~la~~~~~----~~-----------------~----------~~~~~~fD 54 (143)
.+++..++... ++.+|||+|||+|..+..+++.... +. . ....++||
T Consensus 24 ~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD 103 (246)
T 1y8c_A 24 SDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFD 103 (246)
T ss_dssp HHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEE
T ss_pred HHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccCCce
Confidence 34455554443 6789999999999999999876321 00 0 11237899
Q ss_pred EEEEcC-Cc------cchHHHHHHHHhcccCCeEEEEe
Q 032292 55 YAFVDA-DK------DNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 55 ~v~~d~-~~------~~~~~~~~~~~~~L~~gG~li~d 85 (143)
+|++.. .. .+....++.+.++|+|||+++++
T Consensus 104 ~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 104 LITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp EEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred EEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 999976 21 24456888999999999999985
No 142
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.79 E-value=1.1e-08 Score=75.97 Aligned_cols=68 Identities=16% Similarity=0.103 Sum_probs=51.0
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCC-CCc--------------------------cCCCCceeEEEEcCC-c------cc
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPE-DGQ--------------------------SENEGSFDYAFVDAD-K------DN 64 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~-~~~--------------------------~~~~~~fD~v~~d~~-~------~~ 64 (143)
++.+|||||||+|..+..+++.... .+. ....++||+|++..+ . .+
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~~~~~~ 129 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSLGRRFSAVTCMFSSIGHLAGQAE 129 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCCSCCEEEEEECTTGGGGSCHHHH
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCccCCcCEEEEcCchhhhcCCHHH
Confidence 4589999999999999999876431 000 112678999998762 1 23
Q ss_pred hHHHHHHHHhcccCCeEEEEec
Q 032292 65 YCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 65 ~~~~~~~~~~~L~~gG~li~d~ 86 (143)
....++.+.++|+|||+++++.
T Consensus 130 ~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 130 LDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp HHHHHHHHHHTEEEEEEEEECC
T ss_pred HHHHHHHHHHhcCCCcEEEEEe
Confidence 4467889999999999999974
No 143
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.78 E-value=1.5e-08 Score=73.70 Aligned_cols=66 Identities=15% Similarity=0.282 Sum_probs=50.7
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------------c--CCCCceeEEEEcC
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------S--ENEGSFDYAFVDA 60 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------~--~~~~~fD~v~~d~ 60 (143)
+..+|||||||+|..++.+|+..+. .. + ...++||.|++..
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~-~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPD-INYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTT-SEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred CCceEEEEecCCCHHHHHHHHHCCC-CCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEEC
Confidence 5679999999999999999998763 11 1 2357899998863
Q ss_pred Ccc-----------chHHHHHHHHhcccCCeEEEEe
Q 032292 61 DKD-----------NYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 61 ~~~-----------~~~~~~~~~~~~L~~gG~li~d 85 (143)
... .+...++.+.++|+|||.+++.
T Consensus 117 ~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~ 152 (213)
T 2fca_A 117 SDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK 152 (213)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred CCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEE
Confidence 211 1467899999999999999874
No 144
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.78 E-value=1.1e-08 Score=80.75 Aligned_cols=66 Identities=12% Similarity=0.095 Sum_probs=50.5
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc--------------------------------------cCCCCceeEEEEc
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ--------------------------------------SENEGSFDYAFVD 59 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~--------------------------------------~~~~~~fD~v~~d 59 (143)
.+..+|||+|||+|..++.+++..+. .+ ....++||+|+++
T Consensus 221 ~~~~~VLDlGcG~G~~s~~la~~~p~-~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~fD~Ii~n 299 (375)
T 4dcm_A 221 NLEGEIVDLGCGNGVIGLTLLDKNPQ-AKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCN 299 (375)
T ss_dssp SCCSEEEEETCTTCHHHHHHHHHCTT-CEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTCEEEEEEC
T ss_pred cCCCeEEEEeCcchHHHHHHHHHCCC-CEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCCeeEEEEC
Confidence 34589999999999999999998753 21 1234689999997
Q ss_pred CCc--------cchHHHHHHHHhcccCCeEEEE
Q 032292 60 ADK--------DNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 60 ~~~--------~~~~~~~~~~~~~L~~gG~li~ 84 (143)
... ......++.+.++|+|||++++
T Consensus 300 ppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 332 (375)
T 4dcm_A 300 PPFHQQHALTDNVAWEMFHHARRCLKINGELYI 332 (375)
T ss_dssp CCC-------CCHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCcccCcccCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 432 1223578999999999999987
No 145
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.78 E-value=1.4e-08 Score=73.97 Aligned_cols=78 Identities=27% Similarity=0.266 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCC-CC-------------------c---------c-C-CCCce
Q 032292 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE-DG-------------------Q---------S-E-NEGSF 53 (143)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~-~~-------------------~---------~-~-~~~~f 53 (143)
+.....+...+...+..+|||||||+|..+..+++.... .+ . . . ..++|
T Consensus 56 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~f 135 (231)
T 1vbf_A 56 LNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPY 135 (231)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCE
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCc
Confidence 444555555556667789999999999999999987421 00 0 1 1 24689
Q ss_pred eEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 032292 54 DYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 54 D~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
|+|+++....... +.+.++|+|||++++.
T Consensus 136 D~v~~~~~~~~~~---~~~~~~L~pgG~l~~~ 164 (231)
T 1vbf_A 136 DRVVVWATAPTLL---CKPYEQLKEGGIMILP 164 (231)
T ss_dssp EEEEESSBBSSCC---HHHHHTEEEEEEEEEE
T ss_pred cEEEECCcHHHHH---HHHHHHcCCCcEEEEE
Confidence 9999987544333 4678999999999875
No 146
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.76 E-value=2.6e-08 Score=69.90 Aligned_cols=78 Identities=17% Similarity=0.068 Sum_probs=54.6
Q ss_pred hHHHHHHHHHHhh--cCCCEEEEEeccccHHHHHHHhhCCC-CC--------------c--------cCCCCceeEEEEc
Q 032292 5 TIHGQLMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPE-DG--------------Q--------SENEGSFDYAFVD 59 (143)
Q Consensus 5 ~~~~~~l~~l~~~--~~~~~vLeiG~g~G~~t~~la~~~~~-~~--------------~--------~~~~~~fD~v~~d 59 (143)
+++..++.. +.. .++.+|||+|||+|..++.+++.. . .+ . +...++||+|+++
T Consensus 8 ~~~~~l~~~-l~~~~~~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~~~~~~~~~~d~~~~~~~~~fD~i~~n 85 (170)
T 3q87_B 8 EDTYTLMDA-LEREGLEMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALESHRGGNLVRADLLCSINQESVDVVVFN 85 (170)
T ss_dssp HHHHHHHHH-HHHHTCCSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHTCSSSCEEECSTTTTBCGGGCSEEEEC
T ss_pred ccHHHHHHH-HHhhcCCCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhcccCCeEEECChhhhcccCCCCEEEEC
Confidence 455555555 444 567899999999999999998864 1 00 0 2234789999997
Q ss_pred CCcc------------chHHHHHHHHhcccCCeEEEEe
Q 032292 60 ADKD------------NYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 60 ~~~~------------~~~~~~~~~~~~L~~gG~li~d 85 (143)
.... +....++.+.+.+ |||.+++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~ 122 (170)
T 3q87_B 86 PPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLL 122 (170)
T ss_dssp CCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEE
T ss_pred CCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEE
Confidence 5321 2356778888888 99999874
No 147
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.76 E-value=2.1e-08 Score=72.43 Aligned_cols=78 Identities=18% Similarity=0.131 Sum_probs=55.3
Q ss_pred HHHHHHhh-cCCCEEEEEeccccHHHHHHHhhCCCCCc---------------------------------cCCCCceeE
Q 032292 10 LMAMLLRL-VNAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------------------SENEGSFDY 55 (143)
Q Consensus 10 ~l~~l~~~-~~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------------------~~~~~~fD~ 55 (143)
++..+... .++.+|||+|||+|..+..+++..+. .. +...++||+
T Consensus 28 ~~~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 106 (227)
T 1ve3_A 28 LEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYGFE-VVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDY 106 (227)
T ss_dssp HHHHHHHSCCSCCEEEEETCTTSHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEE
T ss_pred HHHHHHHhcCCCCeEEEEeccCCHHHHHHHHcCCE-EEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEE
Confidence 33444433 34789999999999999999887541 00 123468999
Q ss_pred EEEcCC--c---cchHHHHHHHHhcccCCeEEEEeccC
Q 032292 56 AFVDAD--K---DNYCNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 56 v~~d~~--~---~~~~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
|++... . .+....++.+.++|+|||++++....
T Consensus 107 v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 107 VIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp EEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 998754 2 23456788999999999999876443
No 148
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.75 E-value=2.2e-08 Score=77.37 Aligned_cols=79 Identities=16% Similarity=0.186 Sum_probs=55.0
Q ss_pred hHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc--------------------------------------
Q 032292 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ-------------------------------------- 46 (143)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~-------------------------------------- 46 (143)
|.....+...+...++.+|||+|||+|+.++.+++..++.++
T Consensus 91 ~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~ 170 (336)
T 2b25_A 91 PKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVD 170 (336)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceE
Confidence 343444555556777889999999999999999987532111
Q ss_pred -------c---C-CCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 032292 47 -------S---E-NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 47 -------~---~-~~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
. . ..++||+|+++.. .+...++.+.++|+|||++++.
T Consensus 171 ~~~~d~~~~~~~~~~~~fD~V~~~~~--~~~~~l~~~~~~LkpgG~lv~~ 218 (336)
T 2b25_A 171 FIHKDISGATEDIKSLTFDAVALDML--NPHVTLPVFYPHLKHGGVCAVY 218 (336)
T ss_dssp EEESCTTCCC-------EEEEEECSS--STTTTHHHHGGGEEEEEEEEEE
T ss_pred EEECChHHcccccCCCCeeEEEECCC--CHHHHHHHHHHhcCCCcEEEEE
Confidence 0 0 1347999999764 3344788999999999999864
No 149
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.75 E-value=2.1e-08 Score=72.60 Aligned_cols=70 Identities=23% Similarity=0.239 Sum_probs=51.4
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCC----C----------------C-------c-----------cCCCCceeEEEEc
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPE----D----------------G-------Q-----------SENEGSFDYAFVD 59 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~----~----------------~-------~-----------~~~~~~fD~v~~d 59 (143)
.+..+|||+|||+|..+..+++.... + + . +...++||+|++.
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 108 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQ 108 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEc
Confidence 46789999999999999999876211 0 0 0 2235789999987
Q ss_pred CCcc---chH---HHHHHHHhcccCCeEEEEecc
Q 032292 60 ADKD---NYC---NYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 60 ~~~~---~~~---~~~~~~~~~L~~gG~li~d~~ 87 (143)
.... +.. ..++.+.++|+|||++++.+.
T Consensus 109 ~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 109 AFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp SCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred chhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 5322 223 789999999999999988643
No 150
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.74 E-value=9.5e-09 Score=77.56 Aligned_cols=79 Identities=20% Similarity=0.187 Sum_probs=58.8
Q ss_pred HHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------------cC----
Q 032292 9 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------SE---- 48 (143)
Q Consensus 9 ~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------~~---- 48 (143)
.++..++...+..+|||+|||+|..|..+++.++..++ ..
T Consensus 73 ~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~ 152 (274)
T 3ajd_A 73 MIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLK 152 (274)
T ss_dssp GHHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH
T ss_pred HHHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhh
Confidence 45555566667789999999999999999987754232 11
Q ss_pred CCCceeEEEEcCCc---------------------cchHHHHHHHHhcccCCeEEEEecc
Q 032292 49 NEGSFDYAFVDADK---------------------DNYCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 49 ~~~~fD~v~~d~~~---------------------~~~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
..++||+|++|..- ..+...++.+.++|+|||++++...
T Consensus 153 ~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 153 NEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp TTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEES
T ss_pred ccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 25689999998321 2346678889999999999998643
No 151
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.74 E-value=1.6e-08 Score=72.33 Aligned_cols=77 Identities=13% Similarity=0.023 Sum_probs=54.2
Q ss_pred HHHHHHhh-cCCCEEEEEeccccHHHHHHHhhCCCCCc--------------------------------cCCCCceeEE
Q 032292 10 LMAMLLRL-VNAKKTIEIGVFTGYSLLLTALTIPEDGQ--------------------------------SENEGSFDYA 56 (143)
Q Consensus 10 ~l~~l~~~-~~~~~vLeiG~g~G~~t~~la~~~~~~~~--------------------------------~~~~~~fD~v 56 (143)
+...+... .++.+|||+|||+|..+..+++....... +...++||+|
T Consensus 32 ~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v 111 (215)
T 2pxx_A 32 FRALLEPELRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVV 111 (215)
T ss_dssp HHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEE
T ss_pred HHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEE
Confidence 44444443 45689999999999999999887432100 2234689999
Q ss_pred EEcCCc------------------cchHHHHHHHHhcccCCeEEEEec
Q 032292 57 FVDADK------------------DNYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 57 ~~d~~~------------------~~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
++.... .+....++.+.++|+|||++++..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 112 LEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMT 159 (215)
T ss_dssp EEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEe
Confidence 975421 133567889999999999998754
No 152
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.74 E-value=7.1e-08 Score=70.44 Aligned_cols=69 Identities=16% Similarity=0.035 Sum_probs=50.4
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCC-CCc--------------------------------cCCCCceeEEEEcCCc---
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPE-DGQ--------------------------------SENEGSFDYAFVDADK--- 62 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~-~~~--------------------------------~~~~~~fD~v~~d~~~--- 62 (143)
++.+|||||||+|..+..+++.... .+. ....++||+|++....
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~ 145 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCAI 145 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTTS
T ss_pred CCCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhcC
Confidence 4579999999999999999764211 000 1234589999986532
Q ss_pred --cchHHHHHHHHhcccCCeEEEEecc
Q 032292 63 --DNYCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 63 --~~~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
.+...+++.+.++|+|||++++...
T Consensus 146 ~~~~~~~~l~~~~~~LkpgG~l~~~~~ 172 (235)
T 3lcc_A 146 EPEMRPAWAKSMYELLKPDGELITLMY 172 (235)
T ss_dssp CGGGHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 2567789999999999999987543
No 153
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.74 E-value=2e-08 Score=72.85 Aligned_cols=79 Identities=22% Similarity=0.232 Sum_probs=56.2
Q ss_pred HHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCC-------------Cc---------cCCCCceeEEEEcCCc---cc
Q 032292 10 LMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPED-------------GQ---------SENEGSFDYAFVDADK---DN 64 (143)
Q Consensus 10 ~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~-------------~~---------~~~~~~fD~v~~d~~~---~~ 64 (143)
.+..+....++.+|||+|||+|..+..+++...-+ .. +...++||+|++.... .+
T Consensus 38 ~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~vD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~ 117 (219)
T 1vlm_A 38 ELQAVKCLLPEGRGVEIGVGTGRFAVPLKIKIGVEPSERMAEIARKRGVFVLKGTAENLPLKDESFDFALMVTTICFVDD 117 (219)
T ss_dssp HHHHHHHHCCSSCEEEETCTTSTTHHHHTCCEEEESCHHHHHHHHHTTCEEEECBTTBCCSCTTCEEEEEEESCGGGSSC
T ss_pred HHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHhccCCCHHHHHHHHhcCCEEEEcccccCCCCCCCeeEEEEcchHhhccC
Confidence 33445555568999999999999998876531000 00 2335689999987642 35
Q ss_pred hHHHHHHHHhcccCCeEEEEeccC
Q 032292 65 YCNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 65 ~~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
....++.+.+.|+|||.+++....
T Consensus 118 ~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 118 PERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCcEEEEEEeC
Confidence 677899999999999999886543
No 154
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.73 E-value=2.1e-08 Score=75.74 Aligned_cols=76 Identities=14% Similarity=0.092 Sum_probs=53.5
Q ss_pred HHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCC-CCc--------------------------cC-----CCCceeEE
Q 032292 9 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE-DGQ--------------------------SE-----NEGSFDYA 56 (143)
Q Consensus 9 ~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~-~~~--------------------------~~-----~~~~fD~v 56 (143)
+.+...+...+..+|||||||+|..++.+++.... .+. .. ..++||+|
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~V 114 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFV 114 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEE
T ss_pred HHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEE
Confidence 33334445566789999999999999999986321 000 11 14689999
Q ss_pred EEcCCcc-----chHHHHHHHHhcccCCeEEEEe
Q 032292 57 FVDADKD-----NYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 57 ~~d~~~~-----~~~~~~~~~~~~L~~gG~li~d 85 (143)
+++.... +....+..+.++| |||++++.
T Consensus 115 v~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 115 LNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred EEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence 9986432 3345788888999 99999875
No 155
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.73 E-value=3.8e-08 Score=71.59 Aligned_cols=71 Identities=14% Similarity=0.120 Sum_probs=51.9
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCC-CC------------------c--------cCCCCceeEEEEcCCc-------c
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPE-DG------------------Q--------SENEGSFDYAFVDADK-------D 63 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~-~~------------------~--------~~~~~~fD~v~~d~~~-------~ 63 (143)
.++.+|||+|||+|..+..+++..+. .+ . ....++||+|++.... .
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~~~~~~ 118 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRLPDATLHQGDMRDFRLGRKFSAVVSMFSSVGYLKTTE 118 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCCSSCEEEEEECTTGGGGCCSHH
T ss_pred CCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcccCCCCcEEEEcCchHhhcCCHH
Confidence 46789999999999999999887541 00 0 1125689999954321 2
Q ss_pred chHHHHHHHHhcccCCeEEEEeccC
Q 032292 64 NYCNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 64 ~~~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
+....++.+.++|+|||+++++...
T Consensus 119 ~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (239)
T 3bxo_A 119 ELGAAVASFAEHLEPGGVVVVEPWW 143 (239)
T ss_dssp HHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCeEEEEEecc
Confidence 3456888999999999999997543
No 156
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.72 E-value=4.4e-08 Score=71.45 Aligned_cols=75 Identities=27% Similarity=0.281 Sum_probs=52.1
Q ss_pred HHHHHHhh-cCCCEEEEEeccccHHHHHHHhhCCC-CCc------------------------------cCCCCceeEEE
Q 032292 10 LMAMLLRL-VNAKKTIEIGVFTGYSLLLTALTIPE-DGQ------------------------------SENEGSFDYAF 57 (143)
Q Consensus 10 ~l~~l~~~-~~~~~vLeiG~g~G~~t~~la~~~~~-~~~------------------------------~~~~~~fD~v~ 57 (143)
++..+... .+..+|||+|||+|..+..+++. .. .+. ....++||+|+
T Consensus 23 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~ 101 (243)
T 3d2l_A 23 WVAWVLEQVEPGKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPVDAIT 101 (243)
T ss_dssp HHHHHHHHSCTTCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCEEEEE
T ss_pred HHHHHHHHcCCCCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCcCEEE
Confidence 33444433 34689999999999999998876 11 000 11247899999
Q ss_pred EcCCc-------cchHHHHHHHHhcccCCeEEEEe
Q 032292 58 VDADK-------DNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 58 ~d~~~-------~~~~~~~~~~~~~L~~gG~li~d 85 (143)
+..+. .+....++.+.++|+|||+++++
T Consensus 102 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 102 ILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp ECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 86521 23456788899999999999984
No 157
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.72 E-value=1.7e-08 Score=78.80 Aligned_cols=70 Identities=17% Similarity=0.137 Sum_probs=51.4
Q ss_pred hhcCCCEEEEEeccccHHHHHHHhhCCCC--C----c----------------------------cCCCCceeEEEEcC-
Q 032292 16 RLVNAKKTIEIGVFTGYSLLLTALTIPED--G----Q----------------------------SENEGSFDYAFVDA- 60 (143)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~t~~la~~~~~~--~----~----------------------------~~~~~~fD~v~~d~- 60 (143)
...+.++|||||||+|..+..+++.-... + . +...++||+|+++.
T Consensus 63 ~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 63 HLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWM 142 (349)
T ss_dssp HHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCC
T ss_pred ccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccc
Confidence 34578999999999999999999872100 0 0 12347899999864
Q ss_pred -----CccchHHHHHHHHhcccCCeEEEEe
Q 032292 61 -----DKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 61 -----~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
........++.+.++|+|||+++.+
T Consensus 143 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 143 GYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp BBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred cccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 1234566788888999999999855
No 158
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.72 E-value=1.7e-08 Score=75.54 Aligned_cols=77 Identities=13% Similarity=0.165 Sum_probs=55.5
Q ss_pred HHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCC--------------------C--------c---------c---
Q 032292 8 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPED--------------------G--------Q---------S--- 47 (143)
Q Consensus 8 ~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~--------------------~--------~---------~--- 47 (143)
+.+|..++...+..+|||+|||+|..++.+++..+.. . + .
T Consensus 25 ~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~ 104 (260)
T 2ozv_A 25 AMLLASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAK 104 (260)
T ss_dssp HHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHH
T ss_pred HHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhh
Confidence 3455555555567899999999999999999886420 0 0 0
Q ss_pred ------CCCCceeEEEEcCC---------------------ccchHHHHHHHHhcccCCeEEEE
Q 032292 48 ------ENEGSFDYAFVDAD---------------------KDNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 48 ------~~~~~fD~v~~d~~---------------------~~~~~~~~~~~~~~L~~gG~li~ 84 (143)
...++||+|+++.. ...+..+++.+.++|+|||.+++
T Consensus 105 ~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 168 (260)
T 2ozv_A 105 ARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSL 168 (260)
T ss_dssp HHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEE
T ss_pred hhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEE
Confidence 12467999999721 12356778889999999999986
No 159
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.72 E-value=2.5e-08 Score=76.49 Aligned_cols=67 Identities=15% Similarity=0.211 Sum_probs=50.8
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------------cC-CCCceeE
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------------------------SE-NEGSFDY 55 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------------------------~~-~~~~fD~ 55 (143)
.++++|||||||+|..+..+++..+. .+ .. ..++||+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~-~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTV-EHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTC-CEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCC-CEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 46889999999999999999876432 11 11 3678999
Q ss_pred EEEcCCccch-------HHHHHHHHhcccCCeEEEEe
Q 032292 56 AFVDADKDNY-------CNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 56 v~~d~~~~~~-------~~~~~~~~~~L~~gG~li~d 85 (143)
|++|...... ..+++.+.++|+|||++++.
T Consensus 173 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 209 (304)
T 3bwc_A 173 VIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQ 209 (304)
T ss_dssp EEEECC---------CCHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 9998743211 47889999999999999885
No 160
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.71 E-value=2.1e-08 Score=74.26 Aligned_cols=66 Identities=17% Similarity=0.061 Sum_probs=48.2
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCCCCc--------------------------------cCCCC-ceeEEEEcCCccch
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQ--------------------------------SENEG-SFDYAFVDADKDNY 65 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~~~~--------------------------------~~~~~-~fD~v~~d~~~~~~ 65 (143)
+.++|||||||+|..+..+++....... ..... .||.+.+|......
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~l 116 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFISL 116 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSCG
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhhhH
Confidence 4569999999999999999887321000 00111 36777777666666
Q ss_pred HHHHHHHHhcccCCeEEEE
Q 032292 66 CNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 66 ~~~~~~~~~~L~~gG~li~ 84 (143)
...++++.++|+|||.+++
T Consensus 117 ~~~l~~i~rvLkpgG~lv~ 135 (232)
T 3opn_A 117 DLILPPLYEILEKNGEVAA 135 (232)
T ss_dssp GGTHHHHHHHSCTTCEEEE
T ss_pred HHHHHHHHHhccCCCEEEE
Confidence 7789999999999999987
No 161
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.71 E-value=2.1e-08 Score=77.88 Aligned_cols=68 Identities=19% Similarity=0.156 Sum_probs=51.5
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCC-Cc-------------------------------cCCCCceeEEEEcCCcc--
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPED-GQ-------------------------------SENEGSFDYAFVDADKD-- 63 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~-~~-------------------------------~~~~~~fD~v~~d~~~~-- 63 (143)
..+.+|||+|||+|..+..+++..+.. .. ....++||+|+++....
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~fD~Iv~~~~~~~g 274 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRFDMIISNPPFHDG 274 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSCEEEEEECCCCCSS
T ss_pred CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccCCeeEEEECCCcccC
Confidence 356799999999999999999887531 11 12356899999975322
Q ss_pred ------chHHHHHHHHhcccCCeEEEEe
Q 032292 64 ------NYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 64 ------~~~~~~~~~~~~L~~gG~li~d 85 (143)
.....++++.++|+|||.+++-
T Consensus 275 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 302 (343)
T 2pjd_A 275 MQTSLDAAQTLIRGAVRHLNSGGELRIV 302 (343)
T ss_dssp SHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 2356788999999999999763
No 162
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.71 E-value=4.6e-08 Score=78.67 Aligned_cols=79 Identities=18% Similarity=0.171 Sum_probs=56.4
Q ss_pred HHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCC-----------------------------C----c-------cC--
Q 032292 11 MAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPED-----------------------------G----Q-------SE-- 48 (143)
Q Consensus 11 l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~-----------------------------~----~-------~~-- 48 (143)
+...+...+..+|||||||+|+.++.+|+..+.. + . ..
T Consensus 234 ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~ 313 (433)
T 1u2z_A 234 VYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVD 313 (433)
T ss_dssp HHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTT
T ss_pred HHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccc
Confidence 3334455677899999999999999999864321 0 0 01
Q ss_pred ------CCCceeEEEEcCC--ccchHHHHHHHHhcccCCeEEEEeccCC
Q 032292 49 ------NEGSFDYAFVDAD--KDNYCNYHERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 49 ------~~~~fD~v~~d~~--~~~~~~~~~~~~~~L~~gG~li~d~~~~ 89 (143)
..++||+|+++.. ..+....++++.+.|+|||.+++.+.+.
T Consensus 314 ~~~~~~~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d~f~ 362 (433)
T 1u2z_A 314 NNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLKSLR 362 (433)
T ss_dssp CHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESSCSS
T ss_pred ccccccccCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEeeccC
Confidence 0257999998632 2455677889999999999999976554
No 163
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.71 E-value=2.8e-08 Score=71.28 Aligned_cols=68 Identities=21% Similarity=0.240 Sum_probs=50.0
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCC----C---------------Cc---------cCCCCceeEEEEcCCc---cchHH
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPE----D---------------GQ---------SENEGSFDYAFVDADK---DNYCN 67 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~----~---------------~~---------~~~~~~fD~v~~d~~~---~~~~~ 67 (143)
++.+|||+|||+|..+..+ .... + .. +...++||+|++.... .+...
T Consensus 36 ~~~~vLdiG~G~G~~~~~l--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~ 113 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL--PYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVEDVER 113 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC--CCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSCHHH
T ss_pred CCCeEEEECCCCCHhHHhC--CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcCCHHH
Confidence 6789999999999998876 1100 0 00 2335689999987532 35678
Q ss_pred HHHHHHhcccCCeEEEEeccC
Q 032292 68 YHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 68 ~~~~~~~~L~~gG~li~d~~~ 88 (143)
.++++.++|+|||.+++....
T Consensus 114 ~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 114 VLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp HHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHcCCCCEEEEEecC
Confidence 899999999999999886543
No 164
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.71 E-value=2.2e-08 Score=72.14 Aligned_cols=68 Identities=15% Similarity=0.090 Sum_probs=51.9
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------cCCCCceeEEEEcCCc---cch
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------------SENEGSFDYAFVDADK---DNY 65 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------------~~~~~~fD~v~~d~~~---~~~ 65 (143)
.++.+|||+|||+|..+..+++. +.... +..+++||+|++.... .+.
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~~ 109 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLFDP 109 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSCTTCEEEEEEESCGGGSSCH
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCCCCCccCEEEECChhhhcCCH
Confidence 46789999999999999999876 32100 1224689999987532 345
Q ss_pred HHHHHHHHhcccCCeEEEEec
Q 032292 66 CNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 66 ~~~~~~~~~~L~~gG~li~d~ 86 (143)
...++.+.++|+|||++++..
T Consensus 110 ~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 110 WAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp HHHHHHTGGGEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEe
Confidence 678899999999999998864
No 165
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.70 E-value=2.3e-08 Score=75.47 Aligned_cols=78 Identities=13% Similarity=0.096 Sum_probs=58.7
Q ss_pred HHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------cC-CCCc
Q 032292 8 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------SE-NEGS 52 (143)
Q Consensus 8 ~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------~~-~~~~ 52 (143)
.+.+..+....+..+|||+|||+|..++.+|+..+. ++ .. ..++
T Consensus 108 ~e~~~~~~~~~~~~~VLDlgcG~G~~s~~la~~~~~-~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~ 186 (272)
T 3a27_A 108 EERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSKP-KLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDV 186 (272)
T ss_dssp HHHHHHHTSCCTTCEEEETTCTTTTTHHHHHHHTCC-SEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTC
T ss_pred HHHHHHHHhcCCCCEEEEecCcCCHHHHHHHHhCCC-CEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCC
Confidence 344444555567789999999999999999998652 21 11 1357
Q ss_pred eeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 032292 53 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 53 fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
||+|++|... .+...++.+.+.|+|||++++...
T Consensus 187 ~D~Vi~d~p~-~~~~~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 187 ADRVIMGYVH-KTHKFLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp EEEEEECCCS-SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred ceEEEECCcc-cHHHHHHHHHHHcCCCCEEEEEEc
Confidence 9999999754 567788899999999999987644
No 166
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.70 E-value=3.1e-08 Score=78.07 Aligned_cols=73 Identities=16% Similarity=0.292 Sum_probs=55.4
Q ss_pred hcCCCEEEEEeccccHHHHHHHhhCCCCCc--------------------------------------------------
Q 032292 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQ-------------------------------------------------- 46 (143)
Q Consensus 17 ~~~~~~vLeiG~g~G~~t~~la~~~~~~~~-------------------------------------------------- 46 (143)
..++.+|||||||+|..+..+++..++.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 346789999999999999999887532111
Q ss_pred cCCCCceeEEEEcCCc---cchHHHHHHHHhcccCCeEEEEeccCC
Q 032292 47 SENEGSFDYAFVDADK---DNYCNYHERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 47 ~~~~~~fD~v~~d~~~---~~~~~~~~~~~~~L~~gG~li~d~~~~ 89 (143)
+..+++||+|++.... .+....++++.++|+|||++++.+...
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 206 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYA 206 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 0113589999988642 456788999999999999999876543
No 167
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.70 E-value=4.5e-08 Score=72.87 Aligned_cols=63 Identities=24% Similarity=0.237 Sum_probs=48.7
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc-------------------------------cCCCCceeEEEEcCCccchH
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ-------------------------------SENEGSFDYAFVDADKDNYC 66 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~-------------------------------~~~~~~fD~v~~d~~~~~~~ 66 (143)
.++.+|||||||+|..+..+++.++. .. +...++||+|++....
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~---- 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPE-ITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP---- 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTT-SEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC----
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh----
Confidence 45789999999999999999987642 11 2235689999976542
Q ss_pred HHHHHHHhcccCCeEEEEe
Q 032292 67 NYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 67 ~~~~~~~~~L~~gG~li~d 85 (143)
..++++.++|+|||.+++.
T Consensus 159 ~~l~~~~~~L~pgG~l~~~ 177 (269)
T 1p91_A 159 CKAEELARVVKPGGWVITA 177 (269)
T ss_dssp CCHHHHHHHEEEEEEEEEE
T ss_pred hhHHHHHHhcCCCcEEEEE
Confidence 2477889999999999875
No 168
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.70 E-value=3e-08 Score=75.29 Aligned_cols=77 Identities=17% Similarity=0.216 Sum_probs=55.4
Q ss_pred HHHHHHHh--hcCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------------
Q 032292 9 QLMAMLLR--LVNAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------------------------- 46 (143)
Q Consensus 9 ~~l~~l~~--~~~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------------------------- 46 (143)
+++..++. ..++++|||||||+|..+..+++..+. .+
T Consensus 66 e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~-~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~ 144 (283)
T 2i7c_A 66 EMMTHVPMTVSKEPKNVLVVGGGDGGIIRELCKYKSV-ENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKF 144 (283)
T ss_dssp HHHHHHHHTTSSSCCEEEEEECTTSHHHHHHTTCTTC-CEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHH
T ss_pred HHHHHHHHhcCCCCCeEEEEeCCcCHHHHHHHHcCCC-CEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHH
Confidence 34444432 346899999999999999999876432 11
Q ss_pred -cCCCCceeEEEEcCCcc-----c-h-HHHHHHHHhcccCCeEEEEec
Q 032292 47 -SENEGSFDYAFVDADKD-----N-Y-CNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 47 -~~~~~~fD~v~~d~~~~-----~-~-~~~~~~~~~~L~~gG~li~d~ 86 (143)
+...++||+|++|.... . + ..+++.+.++|+|||++++..
T Consensus 145 l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 145 LENVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp HHHCCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHhCCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 11256899999986321 1 1 578999999999999999863
No 169
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.68 E-value=1.1e-07 Score=74.42 Aligned_cols=72 Identities=18% Similarity=0.166 Sum_probs=54.3
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------cC---CCCceeEEEEcC
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------SE---NEGSFDYAFVDA 60 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------~~---~~~~fD~v~~d~ 60 (143)
.++.+|||||||+|..+..+++..+. .+ .. .+++||+|++..
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~ 256 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKE-VEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQ 256 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTT-CEEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEES
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCC-CEEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEec
Confidence 46799999999999999999998764 11 11 236899999865
Q ss_pred Ccc-----chHHHHHHHHhcccCCeEEEEeccCCC
Q 032292 61 DKD-----NYCNYHERLMKLLKVGGIAVYDNTLWG 90 (143)
Q Consensus 61 ~~~-----~~~~~~~~~~~~L~~gG~li~d~~~~~ 90 (143)
... +....++++.+.|+|||.+++.+..+.
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 257 FLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWD 291 (363)
T ss_dssp CSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTT
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccC
Confidence 332 224578899999999999987665543
No 170
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.67 E-value=1.5e-08 Score=82.09 Aligned_cols=82 Identities=18% Similarity=0.186 Sum_probs=60.7
Q ss_pred HHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc-------------------------------------cC
Q 032292 6 IHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ-------------------------------------SE 48 (143)
Q Consensus 6 ~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~-------------------------------------~~ 48 (143)
....++..++...++.+|||+|||+|..|+.+|+.++..+. ..
T Consensus 92 ~ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~ 171 (456)
T 3m4x_A 92 PSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPH 171 (456)
T ss_dssp TTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhh
Confidence 34556666777777899999999999999999988764333 11
Q ss_pred CCCceeEEEEcCCc---------c----------------chHHHHHHHHhcccCCeEEEEecc
Q 032292 49 NEGSFDYAFVDADK---------D----------------NYCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 49 ~~~~fD~v~~d~~~---------~----------------~~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
..++||.|++|+.- . .....++.+.++|+|||+|++...
T Consensus 172 ~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTC 235 (456)
T 3m4x_A 172 FSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTC 235 (456)
T ss_dssp HTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred ccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 34789999998631 0 011567788899999999998644
No 171
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.67 E-value=7e-08 Score=78.53 Aligned_cols=82 Identities=16% Similarity=0.227 Sum_probs=59.2
Q ss_pred HHHHHHHHHHhhc--CCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------------c
Q 032292 6 IHGQLMAMLLRLV--NAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------S 47 (143)
Q Consensus 6 ~~~~~l~~l~~~~--~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------~ 47 (143)
....++..++... +..+|||+|||+|..|..+|+.++..+. .
T Consensus 102 ~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~ 181 (479)
T 2frx_A 102 ASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFG 181 (479)
T ss_dssp HHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHH
T ss_pred HHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhh
Confidence 3445555566655 7789999999999999999998764333 0
Q ss_pred C-CCCceeEEEEcCCc---------cc----------------hHHHHHHHHhcccCCeEEEEecc
Q 032292 48 E-NEGSFDYAFVDADK---------DN----------------YCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 48 ~-~~~~fD~v~~d~~~---------~~----------------~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
. ..++||.|++|+.- .+ ....++.+.++|||||+|++...
T Consensus 182 ~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTc 247 (479)
T 2frx_A 182 AAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTC 247 (479)
T ss_dssp HHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred hhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 1 34689999998421 00 13467788899999999998654
No 172
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.66 E-value=2.8e-08 Score=72.51 Aligned_cols=75 Identities=17% Similarity=0.224 Sum_probs=52.6
Q ss_pred HHHHHHHH-hhcCCCEEEEEeccccHHHHHHHhhCCC-----CCc-----------------------------------
Q 032292 8 GQLMAMLL-RLVNAKKTIEIGVFTGYSLLLTALTIPE-----DGQ----------------------------------- 46 (143)
Q Consensus 8 ~~~l~~l~-~~~~~~~vLeiG~g~G~~t~~la~~~~~-----~~~----------------------------------- 46 (143)
..++..+. ...+..+|||||||+|+.+..+++..+. .++
T Consensus 72 ~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 151 (227)
T 1r18_A 72 AFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE 151 (227)
T ss_dssp HHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEE
Confidence 34444443 3456689999999999999999886431 011
Q ss_pred -----cCC-CCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 032292 47 -----SEN-EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 47 -----~~~-~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
... .++||+|+++...... .+.+.+.|+|||++++.
T Consensus 152 ~d~~~~~~~~~~fD~I~~~~~~~~~---~~~~~~~LkpgG~lvi~ 193 (227)
T 1r18_A 152 GDGRKGYPPNAPYNAIHVGAAAPDT---PTELINQLASGGRLIVP 193 (227)
T ss_dssp SCGGGCCGGGCSEEEEEECSCBSSC---CHHHHHTEEEEEEEEEE
T ss_pred CCcccCCCcCCCccEEEECCchHHH---HHHHHHHhcCCCEEEEE
Confidence 011 2689999998765443 36778999999999885
No 173
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.66 E-value=5.2e-08 Score=73.09 Aligned_cols=69 Identities=13% Similarity=0.075 Sum_probs=50.9
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------cC-CCCceeEEEEcCC
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------------------SE-NEGSFDYAFVDAD 61 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------------------~~-~~~~fD~v~~d~~ 61 (143)
.++.+|||||||+|..+..+++....... +. ..++||+|++...
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 142 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFS 142 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESC
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECch
Confidence 56789999999999999888875321000 12 3568999998754
Q ss_pred c-------cchHHHHHHHHhcccCCeEEEEec
Q 032292 62 K-------DNYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 62 ~-------~~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
. .+....++.+.++|+|||++++..
T Consensus 143 l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 143 FHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp GGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 2 234568889999999999998763
No 174
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.66 E-value=3.7e-08 Score=72.93 Aligned_cols=68 Identities=18% Similarity=0.156 Sum_probs=49.3
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCC----------------------------Cc--------------c--CCCCce
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPED----------------------------GQ--------------S--ENEGSF 53 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~----------------------------~~--------------~--~~~~~f 53 (143)
.+..+|||||||+|..++.+|+..+.. +. + ...++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 356789999999999999999886531 00 1 235789
Q ss_pred eEEEEcCCccc-----------hHHHHHHHHhcccCCeEEEEe
Q 032292 54 DYAFVDADKDN-----------YCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 54 D~v~~d~~~~~-----------~~~~~~~~~~~L~~gG~li~d 85 (143)
|.|++...... +...++.+.++|+|||.+++.
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEE
Confidence 99987642111 246889999999999999864
No 175
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.65 E-value=5.5e-08 Score=70.07 Aligned_cols=78 Identities=10% Similarity=-0.050 Sum_probs=51.1
Q ss_pred hHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCC------------------C----------------Cc----
Q 032292 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE------------------D----------------GQ---- 46 (143)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~------------------~----------------~~---- 46 (143)
|.-.+++..+ ...++.+|||+|||+|..+.+||+.-.. . ..
T Consensus 9 ~~l~~~~~~l-~~~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~ 87 (203)
T 1pjz_A 9 KDLQQYWSSL-NVVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIW 87 (203)
T ss_dssp HHHHHHHHHH-CCCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEE
T ss_pred HHHHHHHHhc-ccCCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEE
Confidence 3334444433 2346789999999999999999986210 0 00
Q ss_pred -----cCC--C-CceeEEEEcCCcc-----chHHHHHHHHhcccCCeEEE
Q 032292 47 -----SEN--E-GSFDYAFVDADKD-----NYCNYHERLMKLLKVGGIAV 83 (143)
Q Consensus 47 -----~~~--~-~~fD~v~~d~~~~-----~~~~~~~~~~~~L~~gG~li 83 (143)
... . ++||+|++.+... ....+++++.++|||||.++
T Consensus 88 ~~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~ 137 (203)
T 1pjz_A 88 CGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGL 137 (203)
T ss_dssp EECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEE
T ss_pred ECccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 001 1 5799999755321 23457889999999999843
No 176
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.65 E-value=1.2e-07 Score=71.00 Aligned_cols=80 Identities=10% Similarity=0.016 Sum_probs=53.8
Q ss_pred HHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCC-----------------CC---------------------c-
Q 032292 6 IHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE-----------------DG---------------------Q- 46 (143)
Q Consensus 6 ~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~-----------------~~---------------------~- 46 (143)
.-.+++..+....++.+|||+|||+|..+.+||+.--. .+ .
T Consensus 55 ~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (252)
T 2gb4_A 55 LLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGS 134 (252)
T ss_dssp HHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSS
T ss_pred HHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCc
Confidence 33444444433346789999999999999999876210 00 0
Q ss_pred -----------cCC-CCceeEEEEcCCc-----cchHHHHHHHHhcccCCeEEEEe
Q 032292 47 -----------SEN-EGSFDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 47 -----------~~~-~~~fD~v~~d~~~-----~~~~~~~~~~~~~L~~gG~li~d 85 (143)
+.. .++||+|+..+.. .....+++.+.++|+|||++++-
T Consensus 135 i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 135 ISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp EEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred eEEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 111 2789999975432 23456899999999999998643
No 177
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.65 E-value=3.1e-08 Score=71.56 Aligned_cols=67 Identities=10% Similarity=0.002 Sum_probs=47.3
Q ss_pred hcCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------------cCCCCceeEE
Q 032292 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------------SENEGSFDYA 56 (143)
Q Consensus 17 ~~~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------------~~~~~~fD~v 56 (143)
..+..+|||||||+|..+..+++..+. ++ +...++ |.|
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~-~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v 102 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPS-RLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GEL 102 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTT-EEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEE
Confidence 456789999999999999999998642 11 112233 666
Q ss_pred EEcCCc--------cchHHHHHHHHhcccCCeEEEEe
Q 032292 57 FVDADK--------DNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 57 ~~d~~~--------~~~~~~~~~~~~~L~~gG~li~d 85 (143)
++.... .+....++++.++|||||.+++.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 103 HVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp EEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEE
T ss_pred EEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEE
Confidence 643321 12256789999999999999884
No 178
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.65 E-value=5.5e-08 Score=75.24 Aligned_cols=72 Identities=15% Similarity=0.036 Sum_probs=51.1
Q ss_pred HHhhcCCCEEEEEeccccHHHHHHHhhCCCCC------c----------------------------cCCCCceeEEEEc
Q 032292 14 LLRLVNAKKTIEIGVFTGYSLLLTALTIPEDG------Q----------------------------SENEGSFDYAFVD 59 (143)
Q Consensus 14 l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~------~----------------------------~~~~~~fD~v~~d 59 (143)
.....++++|||||||+|..++.+++...... . +...++||+|+++
T Consensus 33 ~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~ 112 (328)
T 1g6q_1 33 NKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISE 112 (328)
T ss_dssp HHHHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEEC
T ss_pred hHhhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEe
Confidence 34456789999999999999999987621100 0 1123689999987
Q ss_pred CC------ccchHHHHHHHHhcccCCeEEEEe
Q 032292 60 AD------KDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 60 ~~------~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
.- .......+..+.++|+|||+++.+
T Consensus 113 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 113 WMGYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp CCBTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred CchhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 31 123456778888999999999844
No 179
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.64 E-value=5.1e-08 Score=75.82 Aligned_cols=70 Identities=16% Similarity=0.073 Sum_probs=50.1
Q ss_pred hhcCCCEEEEEeccccHHHHHHHhhCCCCC-----------------------c-----------cCCCCceeEEEEcC-
Q 032292 16 RLVNAKKTIEIGVFTGYSLLLTALTIPEDG-----------------------Q-----------SENEGSFDYAFVDA- 60 (143)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~t~~la~~~~~~~-----------------------~-----------~~~~~~fD~v~~d~- 60 (143)
...++++|||||||+|..+..+++...... . +...++||+|+++.
T Consensus 61 ~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 140 (340)
T 2fyt_A 61 HIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWM 140 (340)
T ss_dssp GGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCC
T ss_pred hhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCc
Confidence 346788999999999999999988621100 0 12237899999865
Q ss_pred --C---ccchHHHHHHHHhcccCCeEEEEe
Q 032292 61 --D---KDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 61 --~---~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
. .......+..+.++|+|||+++.+
T Consensus 141 ~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 170 (340)
T 2fyt_A 141 GYFLLFESMLDSVLYAKNKYLAKGGSVYPD 170 (340)
T ss_dssp BTTBTTTCHHHHHHHHHHHHEEEEEEEESC
T ss_pred hhhccCHHHHHHHHHHHHhhcCCCcEEEcc
Confidence 1 123456788888999999999843
No 180
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.64 E-value=2.9e-08 Score=75.10 Aligned_cols=69 Identities=16% Similarity=0.065 Sum_probs=52.5
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------cCCCCceeEEEEcCCcc
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------SENEGSFDYAFVDADKD 63 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------~~~~~~fD~v~~d~~~~ 63 (143)
.+.++|||+|||+|..++.+|+....... ....++||+|+++...
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p~- 202 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVV- 202 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCS-
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCch-
Confidence 35789999999999999999987653100 1125689999998643
Q ss_pred chHHHHHHHHhcccCCeEEEEecc
Q 032292 64 NYCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 64 ~~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
....+++.+.++|+|||++++...
T Consensus 203 ~~~~~l~~~~~~LkpgG~l~~~~~ 226 (278)
T 2frn_A 203 RTHEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred hHHHHHHHHHHHCCCCeEEEEEEe
Confidence 345678889999999999988644
No 181
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.63 E-value=3.9e-08 Score=72.77 Aligned_cols=76 Identities=8% Similarity=-0.010 Sum_probs=54.4
Q ss_pred HHHHHhhc-CCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------------cCCCC-c
Q 032292 11 MAMLLRLV-NAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------SENEG-S 52 (143)
Q Consensus 11 l~~l~~~~-~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------~~~~~-~ 52 (143)
|..++... +..+|+|||||+|+.++.+|+..+. ++ ....+ +
T Consensus 6 L~~l~~~v~~g~~VlDIGtGsG~l~i~la~~~~~-~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~ 84 (225)
T 3kr9_A 6 LELVASFVSQGAILLDVGSDHAYLPIELVERGQI-KSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQ 84 (225)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTSE-EEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGC
T ss_pred HHHHHHhCCCCCEEEEeCCCcHHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcC
Confidence 45555554 4569999999999999999987543 11 11223 6
Q ss_pred eeEEEEcCCcc-chHHHHHHHHhcccCCeEEEEecc
Q 032292 53 FDYAFVDADKD-NYCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 53 fD~v~~d~~~~-~~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
||.|++.+-.. -....++.+.+.|+++|++|+...
T Consensus 85 ~D~IviaG~Gg~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 85 VSVITIAGMGGRLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp CCEEEEEEECHHHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred CCEEEEcCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 99999754322 346778888899999999988644
No 182
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.62 E-value=3e-08 Score=78.57 Aligned_cols=69 Identities=19% Similarity=0.162 Sum_probs=52.6
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCC-CCc------------------------------cCCCCceeEEEEcCCc---c
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPE-DGQ------------------------------SENEGSFDYAFVDADK---D 63 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~-~~~------------------------------~~~~~~fD~v~~d~~~---~ 63 (143)
.+..+|||||||+|..+..+++.... .+. +..+++||+|++.... .
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h~~ 185 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPANVIYAANTLCHIP 185 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEESCGGGCT
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEEEEEECChHHhcC
Confidence 35679999999999999999876321 000 1124789999987642 4
Q ss_pred chHHHHHHHHhcccCCeEEEEec
Q 032292 64 NYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 64 ~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
++...++++.++|+|||++++..
T Consensus 186 d~~~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 186 YVQSVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp THHHHHHHHHHHEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHcCCCeEEEEEe
Confidence 66788999999999999999864
No 183
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.62 E-value=2.3e-07 Score=69.07 Aligned_cols=74 Identities=12% Similarity=0.056 Sum_probs=50.6
Q ss_pred hhcCCCEEEEEeccccHHHHHHHhhCCC----------CC------c----------------------c---C-----C
Q 032292 16 RLVNAKKTIEIGVFTGYSLLLTALTIPE----------DG------Q----------------------S---E-----N 49 (143)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~t~~la~~~~~----------~~------~----------------------~---~-----~ 49 (143)
...++.+|||||||+|..+..+++..++ .. . . . .
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 119 (275)
T 3bkx_A 40 QVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIA 119 (275)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGT
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCC
Confidence 3456789999999999999999987521 00 0 1 0 2
Q ss_pred CCceeEEEEcCCc---cchHHHHHHHHhcccCCeEEEEeccCC
Q 032292 50 EGSFDYAFVDADK---DNYCNYHERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 50 ~~~fD~v~~d~~~---~~~~~~~~~~~~~L~~gG~li~d~~~~ 89 (143)
.++||+|++.... .+....++.+..+++|||++++.+...
T Consensus 120 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 120 DQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp TCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECS
T ss_pred CCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 3679999987542 233445555566777799999876544
No 184
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.62 E-value=3.4e-08 Score=74.74 Aligned_cols=36 Identities=8% Similarity=-0.020 Sum_probs=29.8
Q ss_pred CCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEe
Q 032292 50 EGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 50 ~~~fD~v~~d~~---~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
+++||+|++... ..+....++++.++|||||.+++-
T Consensus 133 ~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 133 LQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp CCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEE
Confidence 578999998753 346678999999999999999874
No 185
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.62 E-value=4.4e-08 Score=77.16 Aligned_cols=72 Identities=11% Similarity=0.063 Sum_probs=52.0
Q ss_pred hhcCCCEEEEEeccccHHHHHHHhhCCCCC------c---------------------------cCCCCceeEEEEcCC-
Q 032292 16 RLVNAKKTIEIGVFTGYSLLLTALTIPEDG------Q---------------------------SENEGSFDYAFVDAD- 61 (143)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~t~~la~~~~~~~------~---------------------------~~~~~~fD~v~~d~~- 61 (143)
...+.++|||||||+|..++.++++..... . ....++||+|+++.-
T Consensus 60 ~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 60 HHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWMG 139 (376)
T ss_dssp TTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEECCCB
T ss_pred ccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEEcChh
Confidence 345678999999999999999998732100 0 112378999998641
Q ss_pred -c----cchHHHHHHHHhcccCCeEEEEecc
Q 032292 62 -K----DNYCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 62 -~----~~~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
. ......++.+.++|+|||+++++..
T Consensus 140 ~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 140 YFLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp TTBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred hcccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 1 2345678888899999999987644
No 186
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.61 E-value=1.1e-07 Score=73.58 Aligned_cols=70 Identities=16% Similarity=0.121 Sum_probs=53.8
Q ss_pred CCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------cC--CCCceeEEEEcCCc
Q 032292 20 AKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------------------SE--NEGSFDYAFVDADK 62 (143)
Q Consensus 20 ~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------------------~~--~~~~fD~v~~d~~~ 62 (143)
+.+|||||||+|..+..+++..+. .+ .. ..++||+|++....
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vl 258 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQ-LTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCL 258 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTT-CEEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCC-CeEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEeccc
Confidence 789999999999999999998764 11 11 45569999986543
Q ss_pred c-----chHHHHHHHHhcccCCeEEEEeccCCC
Q 032292 63 D-----NYCNYHERLMKLLKVGGIAVYDNTLWG 90 (143)
Q Consensus 63 ~-----~~~~~~~~~~~~L~~gG~li~d~~~~~ 90 (143)
. +....++.+.+.|+|||.+++.+..+.
T Consensus 259 h~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (352)
T 3mcz_A 259 HYFDAREAREVIGHAAGLVKPGGALLILTMTMN 291 (352)
T ss_dssp GGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCC
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 2 235688999999999999987765543
No 187
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.60 E-value=6.1e-07 Score=64.96 Aligned_cols=112 Identities=9% Similarity=0.011 Sum_probs=67.6
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------cCCCCceeEEEEcCCcc
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------SENEGSFDYAFVDADKD 63 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------~~~~~~fD~v~~d~~~~ 63 (143)
.++.+|||+|||+|..++.++...|.. + ....++||+|++.--.+
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a-~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~~~~~~~DvVLa~k~LH 126 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKI-IYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESDVYKGTYDVVFLLKMLP 126 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCC-EEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHHHTTSEEEEEEEETCHH
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCccEEEecccccCCCCCcChhhHhhHHH
Confidence 568999999999999999998776542 2 12467899999764322
Q ss_pred ch---HHHHHHHHhcccCCeEEEEeccC-CCccccCCCCCCCCCcccchHHHHHHHHHHhhcCCCeeEEEeecCCeeEEE
Q 032292 64 NY---CNYHERLMKLLKVGGIAVYDNTL-WGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDGITIC 139 (143)
Q Consensus 64 ~~---~~~~~~~~~~L~~gG~li~d~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~lp~~~Gl~~~ 139 (143)
.. ...+..+.+.|+|||++|.-++- ..|.- ....+++ -+.|...+.+.+ ...--+-+++=+...
T Consensus 127 lL~~~~~al~~v~~~L~pggvfISfptksl~Gr~----~gm~~~Y-------~~~~~~~~~~~~-~~~~~~~~~nEl~y~ 194 (200)
T 3fzg_A 127 VLKQQDVNILDFLQLFHTQNFVISFPIKSLSGKE----KGMEENY-------QLWFESFTKGWI-KILDSKVIGNELVYI 194 (200)
T ss_dssp HHHHTTCCHHHHHHTCEEEEEEEEEECCCCC--C----TTCCCCH-------HHHHHHHTTTTS-CEEEEEEETTEEEEE
T ss_pred hhhhhHHHHHHHHHHhCCCCEEEEeChHHhcCCC----cchhhhH-------HHHHHHhccCcc-eeeeeeeeCceEEEE
Confidence 11 12344788999999999865521 12221 1111111 244555564333 334445667766666
Q ss_pred EEc
Q 032292 140 RRI 142 (143)
Q Consensus 140 ~k~ 142 (143)
++|
T Consensus 195 ~~~ 197 (200)
T 3fzg_A 195 TSG 197 (200)
T ss_dssp ECC
T ss_pred Eec
Confidence 654
No 188
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.59 E-value=1.6e-07 Score=72.95 Aligned_cols=73 Identities=12% Similarity=0.018 Sum_probs=53.2
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCC-Cc---------------------------cC--CCCceeEEEEcCCccc---
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPED-GQ---------------------------SE--NEGSFDYAFVDADKDN--- 64 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~-~~---------------------------~~--~~~~fD~v~~d~~~~~--- 64 (143)
.+..+|||||||+|..+..+++..+.. +. .. ...+||+|++.....+
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~p~~D~v~~~~vlh~~~d 262 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREVPHADVHVLKRILHNWGD 262 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHTTCCCCCGGGTTSEEEEECCTTTCCCCCSEEEEESCGGGSCH
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhhcccccccCCCCCeEEEecCCCCCCCCCcEEEEehhccCCCH
Confidence 457899999999999999999987531 00 11 1127999998754322
Q ss_pred --hHHHHHHHHhcccCCeEEEEeccCCC
Q 032292 65 --YCNYHERLMKLLKVGGIAVYDNTLWG 90 (143)
Q Consensus 65 --~~~~~~~~~~~L~~gG~li~d~~~~~ 90 (143)
....++++.+.|+|||.+++.+....
T Consensus 263 ~~~~~~L~~~~~~LkpgG~l~i~e~~~~ 290 (348)
T 3lst_A 263 EDSVRILTNCRRVMPAHGRVLVIDAVVP 290 (348)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEEECCBC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 24689999999999999988765543
No 189
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.58 E-value=8.3e-08 Score=74.77 Aligned_cols=69 Identities=13% Similarity=0.085 Sum_probs=50.3
Q ss_pred hcCCCEEEEEeccccHHHHHHHhhCCCC--------------------C---c----------cCCCCceeEEEEcCC--
Q 032292 17 LVNAKKTIEIGVFTGYSLLLTALTIPED--------------------G---Q----------SENEGSFDYAFVDAD-- 61 (143)
Q Consensus 17 ~~~~~~vLeiG~g~G~~t~~la~~~~~~--------------------~---~----------~~~~~~fD~v~~d~~-- 61 (143)
..++++|||||||+|..+..+++.-... + + ....++||+|++..-
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGY 127 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEEECCCBT
T ss_pred cCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCceeEEEEeCchh
Confidence 3477899999999999999998762110 0 0 112368999998742
Q ss_pred ---ccchHHHHHHHHhcccCCeEEEEe
Q 032292 62 ---KDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 62 ---~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
...+...+..+.++|+|||++++.
T Consensus 128 ~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 128 MLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred cCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 234567788888999999999854
No 190
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.58 E-value=1.8e-07 Score=73.30 Aligned_cols=72 Identities=13% Similarity=0.085 Sum_probs=53.8
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc-------------------------------c---CCCCceeEEEEcCCcc
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ-------------------------------S---ENEGSFDYAFVDADKD 63 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~-------------------------------~---~~~~~fD~v~~d~~~~ 63 (143)
.+..+|||||||+|..+..+++..+. .+ . ....+||+|++.....
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~~~D~v~~~~vlh 279 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPG-LRGTLLERPPVAEEARELLTGRGLADRCEILPGDFFETIPDGADVYLIKHVLH 279 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCSSCSEEEEESCGG
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCC-CeEEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCCCCCCCCceEEEhhhhhc
Confidence 45789999999999999999998763 11 1 1123799999875432
Q ss_pred c-----hHHHHHHHHhcccCCeEEEEeccCCC
Q 032292 64 N-----YCNYHERLMKLLKVGGIAVYDNTLWG 90 (143)
Q Consensus 64 ~-----~~~~~~~~~~~L~~gG~li~d~~~~~ 90 (143)
+ ....++++.+.|+|||.+++.+....
T Consensus 280 ~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 280 DWDDDDVVRILRRIATAMKPDSRLLVIDNLID 311 (369)
T ss_dssp GSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCC
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 2 23578999999999999988765543
No 191
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.58 E-value=9.6e-08 Score=72.34 Aligned_cols=70 Identities=10% Similarity=0.021 Sum_probs=50.3
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCC-CCc----------------------------------cCCCCceeEEEEcCC--
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPE-DGQ----------------------------------SENEGSFDYAFVDAD-- 61 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~-~~~----------------------------------~~~~~~fD~v~~d~~-- 61 (143)
++.+|||||||+|..+..+++.... .+. ....++||+|++...
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~ 161 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALDKRFGTVVISSGSI 161 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCSCCEEEEEECHHHH
T ss_pred CCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcCCCcCEEEECCccc
Confidence 4569999999999999999886211 000 112578999986421
Q ss_pred -c---cchHHHHHHHHhcccCCeEEEEeccC
Q 032292 62 -K---DNYCNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 62 -~---~~~~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
. .+....++++.++|+|||++++....
T Consensus 162 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 162 NELDEADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp TTSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 1 13467889999999999999987544
No 192
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.57 E-value=2.4e-07 Score=72.09 Aligned_cols=81 Identities=15% Similarity=0.122 Sum_probs=58.8
Q ss_pred ChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------------c
Q 032292 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------S 47 (143)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------~ 47 (143)
.+..+..+..++...+..+|||+|||+|..++.+|....+... +
T Consensus 188 ~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~ 267 (354)
T 3tma_A 188 TPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLP 267 (354)
T ss_dssp CHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGG
T ss_pred CHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCc
Confidence 4455566666666677889999999999999999987621111 1
Q ss_pred CCCCceeEEEEcCCc-----------cchHHHHHHHHhcccCCeEEEE
Q 032292 48 ENEGSFDYAFVDADK-----------DNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 48 ~~~~~fD~v~~d~~~-----------~~~~~~~~~~~~~L~~gG~li~ 84 (143)
...++||+|++|..- ..|...++.+.++|+|||.+++
T Consensus 268 ~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i 315 (354)
T 3tma_A 268 RFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVAL 315 (354)
T ss_dssp GTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEE
T ss_pred cccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 224568999997421 1246678888999999999987
No 193
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.56 E-value=1.2e-07 Score=75.27 Aligned_cols=69 Identities=16% Similarity=0.233 Sum_probs=51.0
Q ss_pred hhcC-CCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------cCCCCceeEEEEcC
Q 032292 16 RLVN-AKKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------SENEGSFDYAFVDA 60 (143)
Q Consensus 16 ~~~~-~~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------~~~~~~fD~v~~d~ 60 (143)
...+ +++|||+|||+|..++.+|+.... .. +...+.||+|++|.
T Consensus 210 ~~~~~g~~VLDlg~GtG~~sl~~a~~ga~-V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dp 288 (393)
T 4dmg_A 210 AMVRPGERVLDVYSYVGGFALRAARKGAY-ALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDP 288 (393)
T ss_dssp TTCCTTCEEEEESCTTTHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECC
T ss_pred HHhcCCCeEEEcccchhHHHHHHHHcCCe-EEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECC
Confidence 3334 789999999999999999986321 11 12244599999986
Q ss_pred Cc------------cchHHHHHHHHhcccCCeEEEEe
Q 032292 61 DK------------DNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 61 ~~------------~~~~~~~~~~~~~L~~gG~li~d 85 (143)
.. ..|...++.+.++|+|||++++.
T Consensus 289 P~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~ 325 (393)
T 4dmg_A 289 PTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLS 325 (393)
T ss_dssp CCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 42 24567788889999999999853
No 194
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.56 E-value=1.1e-07 Score=69.73 Aligned_cols=69 Identities=10% Similarity=-0.076 Sum_probs=50.5
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc--------------------------cCCC----------CceeEEEEcCC
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ--------------------------SENE----------GSFDYAFVDAD 61 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~--------------------------~~~~----------~~fD~v~~d~~ 61 (143)
.+..+|||+|||+|..+..+++..+. .. .... .+||+|++...
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~ 133 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFPR-VIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTG 133 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSSC-EEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCCC-EEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcch
Confidence 45689999999999999999988652 11 0000 13899998753
Q ss_pred c---c--chHHHHHHHHhcccCCeEEEEecc
Q 032292 62 K---D--NYCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 62 ~---~--~~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
. . +...+++.+.++|+|||++++-+.
T Consensus 134 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 134 FHHIPVEKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp STTSCGGGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 2 2 456789999999999998766443
No 195
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.55 E-value=1.2e-07 Score=72.97 Aligned_cols=71 Identities=13% Similarity=0.038 Sum_probs=53.5
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCCCCc-------------------------------c---CCCCceeEEEEcCCccc
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQ-------------------------------S---ENEGSFDYAFVDADKDN 64 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~~~~-------------------------------~---~~~~~fD~v~~d~~~~~ 64 (143)
+..+|||||||+|..+..+++..+. .+ . ....+||+|++.....+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~~~D~v~~~~vlh~ 247 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHED-LSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPAGAGGYVLSAVLHD 247 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTT-CEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCSCSEEEEESCGGG
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCC-CeEEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCCCCcEEEEehhhcc
Confidence 4689999999999999999998764 11 1 11227999998654322
Q ss_pred -----hHHHHHHHHhcccCCeEEEEeccCCC
Q 032292 65 -----YCNYHERLMKLLKVGGIAVYDNTLWG 90 (143)
Q Consensus 65 -----~~~~~~~~~~~L~~gG~li~d~~~~~ 90 (143)
....++++.+.|+|||.+++.+....
T Consensus 248 ~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 278 (332)
T 3i53_A 248 WDDLSAVAILRRCAEAAGSGGVVLVIEAVAG 278 (332)
T ss_dssp SCHHHHHHHHHHHHHHHTTTCEEEEEECCCC
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEEEeecCC
Confidence 35678999999999999988766554
No 196
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.55 E-value=3.1e-07 Score=70.53 Aligned_cols=68 Identities=10% Similarity=0.005 Sum_probs=51.7
Q ss_pred CEEEEEeccccHHHHHHHhhCCCCCc----------------------------------cCCCCceeEEEEcCCccc--
Q 032292 21 KKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------SENEGSFDYAFVDADKDN-- 64 (143)
Q Consensus 21 ~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------~~~~~~fD~v~~d~~~~~-- 64 (143)
.+|||+|||+|..+..+++..+. .+ ....++||+|++.....+
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~~~~ 247 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPS-ARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIYLLSRIIGDLD 247 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTT-CEEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTTCCCSSCSEEEEESCGGGCC
T ss_pred CEEEEeCCCchHHHHHHHHHCCC-CEEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCCCCCCCCCEEEEchhccCCC
Confidence 89999999999999999988753 11 112356999998764332
Q ss_pred ---hHHHHHHHHhcccCCeEEEEeccCC
Q 032292 65 ---YCNYHERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 65 ---~~~~~~~~~~~L~~gG~li~d~~~~ 89 (143)
....++.+.+.|+|||.+++.+...
T Consensus 248 ~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 275 (334)
T 2ip2_A 248 EAASLRLLGNCREAMAGDGRVVVIERTI 275 (334)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 2367889999999999998876554
No 197
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.53 E-value=1.4e-07 Score=75.59 Aligned_cols=77 Identities=14% Similarity=0.097 Sum_probs=54.7
Q ss_pred HHhhcCCCEEEEEeccccHHHHHHHhhCCCC-Cc--------------------------------------cCC-----
Q 032292 14 LLRLVNAKKTIEIGVFTGYSLLLTALTIPED-GQ--------------------------------------SEN----- 49 (143)
Q Consensus 14 l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~-~~--------------------------------------~~~----- 49 (143)
.+...+..+|||||||+|..++.+|...+.. .. ...
T Consensus 168 ~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~ 247 (438)
T 3uwp_A 168 EIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWR 247 (438)
T ss_dssp HHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHH
T ss_pred hcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccc
Confidence 3345677899999999999999999765532 00 000
Q ss_pred C--CceeEEEEcCC--ccchHHHHHHHHhcccCCeEEEEeccCCC
Q 032292 50 E--GSFDYAFVDAD--KDNYCNYHERLMKLLKVGGIAVYDNTLWG 90 (143)
Q Consensus 50 ~--~~fD~v~~d~~--~~~~~~~~~~~~~~L~~gG~li~d~~~~~ 90 (143)
. ..||+||++.. ..+....+.++.+.|||||.||+.+.+..
T Consensus 248 d~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 248 ERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp HHHHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred cccCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 0 36889988643 23455678888999999999998766543
No 198
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.53 E-value=6.1e-07 Score=68.70 Aligned_cols=71 Identities=13% Similarity=0.161 Sum_probs=52.4
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------cCCCCceeEEEEcCCc
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------------------SENEGSFDYAFVDADK 62 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------------------~~~~~~fD~v~~d~~~ 62 (143)
.++.+|||+|||+|..+..+++..+. .+ ....+.||+|++....
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~l 242 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPN-AEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDYDLVLLPNFL 242 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTT-CEEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSCEEEEEEESCG
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCC-CeEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccCCCCCCCcEEEEcchh
Confidence 56789999999999999999988753 11 1123459999986532
Q ss_pred c-----chHHHHHHHHhcccCCeEEEEeccCC
Q 032292 63 D-----NYCNYHERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 63 ~-----~~~~~~~~~~~~L~~gG~li~d~~~~ 89 (143)
. +....++.+.+.|+|||.+++.+...
T Consensus 243 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 243 HHFDVATCEQLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred ccCCHHHHHHHHHHHHHhCCCCcEEEEEeecC
Confidence 2 23578899999999999877655543
No 199
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.53 E-value=6.4e-07 Score=69.57 Aligned_cols=78 Identities=15% Similarity=0.178 Sum_probs=53.2
Q ss_pred HHHHHh-hcCCCEEEEEeccccHHHHHHHhhCCC----CC---------------------c-----------cC---CC
Q 032292 11 MAMLLR-LVNAKKTIEIGVFTGYSLLLTALTIPE----DG---------------------Q-----------SE---NE 50 (143)
Q Consensus 11 l~~l~~-~~~~~~vLeiG~g~G~~t~~la~~~~~----~~---------------------~-----------~~---~~ 50 (143)
+..++. ..++.+|||+|||+|..++.+++.... +. . +. ..
T Consensus 144 l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~ 223 (332)
T 2igt_A 144 LKNAVETADRPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRG 223 (332)
T ss_dssp HHHHHHHSSSCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcC
Confidence 444443 335679999999999999999875321 00 0 00 03
Q ss_pred CceeEEEEcCCc-------------cchHHHHHHHHhcccCCeEEEEeccC
Q 032292 51 GSFDYAFVDADK-------------DNYCNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 51 ~~fD~v~~d~~~-------------~~~~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
++||+|++|... ..+...++.+.++|+|||++++....
T Consensus 224 ~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 224 STYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp CCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred CCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 589999997531 13567788889999999998775443
No 200
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.51 E-value=4e-07 Score=71.32 Aligned_cols=71 Identities=13% Similarity=0.087 Sum_probs=52.1
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc---------------------------cCCCCceeEEEEcCCccc-----h
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------------SENEGSFDYAFVDADKDN-----Y 65 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------------~~~~~~fD~v~~d~~~~~-----~ 65 (143)
.+..+|||||||+|..+..+++..|. .+ ...... |+|++.....+ .
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~v~~~~~D~~~~~p~~-D~v~~~~vlh~~~d~~~ 277 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPT-IKGVNFDLPHVISEAPQFPGVTHVGGDMFKEVPSG-DTILMKWILHDWSDQHC 277 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEECHHHHTTCCCCTTEEEEECCTTTCCCCC-SEEEEESCGGGSCHHHH
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCC-CeEEEecCHHHHHhhhhcCCeEEEeCCcCCCCCCC-CEEEehHHhccCCHHHH
Confidence 45689999999999999999998864 11 111122 99998654332 2
Q ss_pred HHHHHHHHhcccCCeEEEEeccCCC
Q 032292 66 CNYHERLMKLLKVGGIAVYDNTLWG 90 (143)
Q Consensus 66 ~~~~~~~~~~L~~gG~li~d~~~~~ 90 (143)
...++++.+.|+|||.+++.+....
T Consensus 278 ~~~L~~~~~~L~pgG~l~i~e~~~~ 302 (364)
T 3p9c_A 278 ATLLKNCYDALPAHGKVVLVQCILP 302 (364)
T ss_dssp HHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred HHHHHHHHHHcCCCCEEEEEEeccC
Confidence 4678999999999999987766543
No 201
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.50 E-value=3.1e-07 Score=70.61 Aligned_cols=67 Identities=12% Similarity=0.019 Sum_probs=47.7
Q ss_pred CCCEEEEEeccccHHHHHHHhh--C----------CC--C---Cc----------------cCCCCceeEEEEcCCcc--
Q 032292 19 NAKKTIEIGVFTGYSLLLTALT--I----------PE--D---GQ----------------SENEGSFDYAFVDADKD-- 63 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~--~----------~~--~---~~----------------~~~~~~fD~v~~d~~~~-- 63 (143)
+..+|||+|||+|.+|..+++. + +. + .. ....++||+|++|....
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~~~~fD~V~sd~~~~~g 161 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIPPERCDTLLCDIGESSP 161 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSCCCCCSEEEECCCCCCS
T ss_pred CCCEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCCcCCCCEEEECCccccC
Confidence 4579999999999999999886 1 10 0 00 11246899999986531
Q ss_pred ch----H---HHHHHHHhcccCCeEEEEe
Q 032292 64 NY----C---NYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 64 ~~----~---~~~~~~~~~L~~gG~li~d 85 (143)
.+ . ..++.+.++|+|||.++++
T Consensus 162 ~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 162 NPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred cchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 11 1 3677778999999999985
No 202
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.50 E-value=2.8e-07 Score=68.32 Aligned_cols=76 Identities=9% Similarity=0.017 Sum_probs=53.7
Q ss_pred HHHHHhhc-CCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------------cCCC-Cc
Q 032292 11 MAMLLRLV-NAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------SENE-GS 52 (143)
Q Consensus 11 l~~l~~~~-~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------~~~~-~~ 52 (143)
|..++... +..+|+|||||+|+.++.+++..+. .+ .... ++
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~-~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~ 90 (230)
T 3lec_A 12 LQKVANYVPKGARLLDVGSDHAYLPIFLLQMGYC-DFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADN 90 (230)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTCE-EEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGC
T ss_pred HHHHHHhCCCCCEEEEECCchHHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccc
Confidence 44455544 4579999999999999999987542 11 1112 26
Q ss_pred eeEEEEcCCc-cchHHHHHHHHhcccCCeEEEEecc
Q 032292 53 FDYAFVDADK-DNYCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 53 fD~v~~d~~~-~~~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
||+|++.+-. .-..+.++...+.|+++|.+|+...
T Consensus 91 ~D~IviaGmGg~lI~~IL~~~~~~l~~~~~lIlqp~ 126 (230)
T 3lec_A 91 IDTITICGMGGRLIADILNNDIDKLQHVKTLVLQPN 126 (230)
T ss_dssp CCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred cCEEEEeCCchHHHHHHHHHHHHHhCcCCEEEEECC
Confidence 9999875432 2355678888899999999988653
No 203
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.50 E-value=2.8e-07 Score=70.02 Aligned_cols=79 Identities=14% Similarity=0.209 Sum_probs=53.8
Q ss_pred hHHHHHHHHHHhh---cCCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------
Q 032292 5 TIHGQLMAMLLRL---VNAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------- 46 (143)
Q Consensus 5 ~~~~~~l~~l~~~---~~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------- 46 (143)
|++..++..+... .++.+|||+|||+|..++.+++. +. .+
T Consensus 106 ~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~~-~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~ 183 (284)
T 1nv8_A 106 PETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-SD-AIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFL 183 (284)
T ss_dssp TTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-SS-CEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTT
T ss_pred hhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-CC-CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcch
Confidence 3444444444432 35689999999999999999988 43 22
Q ss_pred cCCCCce---eEEEEcCCc-------------c---------chHHHHHHHH-hcccCCeEEEEe
Q 032292 47 SENEGSF---DYAFVDADK-------------D---------NYCNYHERLM-KLLKVGGIAVYD 85 (143)
Q Consensus 47 ~~~~~~f---D~v~~d~~~-------------~---------~~~~~~~~~~-~~L~~gG~li~d 85 (143)
....++| |+|+++..- . +-...++.+. +.|+|||++++.
T Consensus 184 ~~~~~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 184 EPFKEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp GGGGGGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred hhcccccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 1112578 999997210 0 1126788999 999999999874
No 204
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.49 E-value=9.7e-08 Score=71.99 Aligned_cols=37 Identities=14% Similarity=0.083 Sum_probs=29.1
Q ss_pred CceeEEEEcCCc-------cchHHHHHHHHhcccCCeEEEEecc
Q 032292 51 GSFDYAFVDADK-------DNYCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 51 ~~fD~v~~d~~~-------~~~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
++||+|++.... .++...++++.++|||||++++...
T Consensus 173 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~ 216 (289)
T 2g72_A 173 LPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGA 216 (289)
T ss_dssp SSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 459999987642 2456789999999999999998643
No 205
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.48 E-value=1.3e-07 Score=71.21 Aligned_cols=33 Identities=24% Similarity=0.295 Sum_probs=27.6
Q ss_pred ceeEEEEcCCcc--c----hHHHHHHHHhcccCCeEEEE
Q 032292 52 SFDYAFVDADKD--N----YCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 52 ~fD~v~~d~~~~--~----~~~~~~~~~~~L~~gG~li~ 84 (143)
+||+||+|+... + +.+.++.+.++|+|||+++.
T Consensus 173 ~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 173 KVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp CEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred eEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 799999998432 2 56789999999999999985
No 206
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.47 E-value=5.9e-08 Score=71.62 Aligned_cols=38 Identities=29% Similarity=0.275 Sum_probs=30.2
Q ss_pred CceeEEEEcCCcc-------chHHHHHHHHhcccCCeEEEEeccC
Q 032292 51 GSFDYAFVDADKD-------NYCNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 51 ~~fD~v~~d~~~~-------~~~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
++||+|++..... ++...++.+.++|+|||++++.+..
T Consensus 156 ~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 156 PPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp CCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred CCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 6899999875432 4567889999999999999987643
No 207
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.47 E-value=4.2e-07 Score=70.50 Aligned_cols=70 Identities=16% Similarity=0.068 Sum_probs=51.8
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------cCCCCceeEEEEcCCcc
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------SENEGSFDYAFVDADKD 63 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------~~~~~~fD~v~~d~~~~ 63 (143)
.+..+|||||||+|..+..+++..+. .+ ......||+|++.....
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~-~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~ 260 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPH-VSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAIILSFVLL 260 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSSCEEEEEEESCGG
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCC-CEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCCCccEEEEccccc
Confidence 45789999999999999999988753 11 11223599999865432
Q ss_pred c-----hHHHHHHHHhcccCCeEEEEeccC
Q 032292 64 N-----YCNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 64 ~-----~~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
+ ....++++.+.|+|||.+++.+..
T Consensus 261 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 261 NWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp GSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 2 246789999999999988876554
No 208
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.47 E-value=2.2e-07 Score=73.46 Aligned_cols=69 Identities=17% Similarity=0.147 Sum_probs=48.2
Q ss_pred hcCCCEEEEEeccccHHHHHHHhhCCCCCc---------------------------------cCCCCceeEEEEcC---
Q 032292 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------------------SENEGSFDYAFVDA--- 60 (143)
Q Consensus 17 ~~~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------------------~~~~~~fD~v~~d~--- 60 (143)
..+.++|||||||+|..++..|++-..... ...+++||+|++..
T Consensus 81 ~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~~ 160 (376)
T 4hc4_A 81 ALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGY 160 (376)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCBT
T ss_pred hcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeecccc
Confidence 347899999999999999988876321000 12357899999742
Q ss_pred ---CccchHHHHHHHHhcccCCeEEEEe
Q 032292 61 ---DKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 61 ---~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
.......++....++|+|||+++-+
T Consensus 161 ~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 161 GLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp TBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred cccccchhhhHHHHHHhhCCCCceECCc
Confidence 1123455666667999999999855
No 209
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.46 E-value=3e-07 Score=72.06 Aligned_cols=70 Identities=11% Similarity=0.069 Sum_probs=51.3
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCCCCc---------------------------cCCCCceeEEEEcCCccc-----hH
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------------SENEGSFDYAFVDADKDN-----YC 66 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------------~~~~~~fD~v~~d~~~~~-----~~ 66 (143)
+..+|||||||+|..+..+++..|. .+ ...... |+|++....++ ..
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~p~~-D~v~~~~vlh~~~~~~~~ 280 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPS-INAINFDLPHVIQDAPAFSGVEHLGGDMFDGVPKG-DAIFIKWICHDWSDEHCL 280 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEECHHHHTTCCCCTTEEEEECCTTTCCCCC-SEEEEESCGGGBCHHHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCC-CEEEEEehHHHHHhhhhcCCCEEEecCCCCCCCCC-CEEEEechhhcCCHHHHH
Confidence 4689999999999999999998864 11 111122 99988654332 23
Q ss_pred HHHHHHHhcccCCeEEEEeccCCC
Q 032292 67 NYHERLMKLLKVGGIAVYDNTLWG 90 (143)
Q Consensus 67 ~~~~~~~~~L~~gG~li~d~~~~~ 90 (143)
..++++.+.|+|||.+++.+....
T Consensus 281 ~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 281 KLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp HHHHHHHHHSCTTCEEEEEECCCC
T ss_pred HHHHHHHHHcCCCCEEEEEEeccC
Confidence 578999999999999887766543
No 210
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.46 E-value=3e-07 Score=70.45 Aligned_cols=38 Identities=18% Similarity=0.224 Sum_probs=29.3
Q ss_pred CCceeEEEEcCCc------cchHHHHHHHHhcccCCeEEEEecc
Q 032292 50 EGSFDYAFVDADK------DNYCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 50 ~~~fD~v~~d~~~------~~~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
.++||+|++.... .+....++.+.++|+|||++++...
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 3689999875321 2446789999999999999998644
No 211
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.45 E-value=2.7e-07 Score=72.17 Aligned_cols=71 Identities=14% Similarity=0.090 Sum_probs=52.2
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc------------------------c--CCCCceeEEEEcCCcc---ch--H
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------S--ENEGSFDYAFVDADKD---NY--C 66 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------~--~~~~~fD~v~~d~~~~---~~--~ 66 (143)
.++.+|||||||+|..+..+++..+. .+ . .....||+|++..... +. .
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~-~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~~~~D~v~~~~~lh~~~d~~~~ 286 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPL-IKGINFDLPQVIENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCI 286 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEECHHHHTTCCCCTTEEEEECCTTTCCCCEEEEEEESSGGGSCHHHHH
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCC-CeEEEeChHHHHHhhhhcCCCEEEeCCcccCCCCCCEEEEecccccCCHHHHH
Confidence 35689999999999999999998763 11 0 1112399999875432 22 2
Q ss_pred HHHHHHHhcccCCeEEEEeccCC
Q 032292 67 NYHERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 67 ~~~~~~~~~L~~gG~li~d~~~~ 89 (143)
..++++.+.|+|||.+++.+...
T Consensus 287 ~~l~~~~~~L~pgG~l~i~e~~~ 309 (372)
T 1fp1_D 287 EFLSNCHKALSPNGKVIIVEFIL 309 (372)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEEecc
Confidence 68899999999999998765543
No 212
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.45 E-value=4e-07 Score=67.24 Aligned_cols=67 Identities=19% Similarity=0.205 Sum_probs=48.4
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCCC------------------------------Cc--------------c--CCCCc
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPED------------------------------GQ--------------S--ENEGS 52 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~~------------------------------~~--------------~--~~~~~ 52 (143)
+..+|||||||+|..++.+|+..+.. +. + ...++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 56799999999999999999876530 10 1 22457
Q ss_pred eeEEEEcCCccc-----------hHHHHHHHHhcccCCeEEEEe
Q 032292 53 FDYAFVDADKDN-----------YCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 53 fD~v~~d~~~~~-----------~~~~~~~~~~~L~~gG~li~d 85 (143)
+|.|++...... +...++.+.++|+|||++++.
T Consensus 129 ~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 129 LSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp EEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred cCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 888876532111 147889999999999999873
No 213
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.44 E-value=3.1e-07 Score=77.89 Aligned_cols=76 Identities=22% Similarity=0.376 Sum_probs=55.1
Q ss_pred HHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc-------------------------------------cCCCCceeE
Q 032292 13 MLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ-------------------------------------SENEGSFDY 55 (143)
Q Consensus 13 ~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~-------------------------------------~~~~~~fD~ 55 (143)
.+....+.++|||+|||+|..++.+|+.-..... +...++||+
T Consensus 533 ~l~~~~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~ 612 (703)
T 3v97_A 533 MLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDL 612 (703)
T ss_dssp HHHHHCTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEE
T ss_pred HHHHhcCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccE
Confidence 3444557899999999999999998874321000 123468999
Q ss_pred EEEcCCc--------------cchHHHHHHHHhcccCCeEEEEeccC
Q 032292 56 AFVDADK--------------DNYCNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 56 v~~d~~~--------------~~~~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
|++|... ..|...++.+.++|+|||+|++....
T Consensus 613 Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 613 IFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp EEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 9998631 24566788889999999999987544
No 214
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.44 E-value=3.9e-07 Score=70.94 Aligned_cols=69 Identities=16% Similarity=0.106 Sum_probs=51.3
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------cCCCCceeEEEEcCCcc
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------SENEGSFDYAFVDADKD 63 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------~~~~~~fD~v~~d~~~~ 63 (143)
.++.+|||||||+|..+..+++..+. .+ ......||+|++.....
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~-~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~ 259 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPH-LRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSFVLL 259 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTT-CEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCCEEEEEEESCGG
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCC-CEEEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCCCCCEEEEecccc
Confidence 45789999999999999999988753 11 11223499999875432
Q ss_pred c-----hHHHHHHHHhcccCCeEEEEecc
Q 032292 64 N-----YCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 64 ~-----~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
+ ....++++.+.|+|||.+++.+.
T Consensus 260 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 260 NWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 2 23678999999999998877554
No 215
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.41 E-value=1.8e-08 Score=73.89 Aligned_cols=77 Identities=9% Similarity=0.015 Sum_probs=51.6
Q ss_pred HHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCC-CCc--------------------------------cCCCCceeE
Q 032292 9 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE-DGQ--------------------------------SENEGSFDY 55 (143)
Q Consensus 9 ~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~-~~~--------------------------------~~~~~~fD~ 55 (143)
.++..+....++.+|||+|||+|..++.+++.... .+. ....++||+
T Consensus 68 ~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~ 147 (241)
T 3gdh_A 68 HIAGRVSQSFKCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADV 147 (241)
T ss_dssp HHHHHHHHHSCCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSE
T ss_pred HHHHHhhhccCCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCE
Confidence 33444444457899999999999999999986321 000 113568999
Q ss_pred EEEcCCccc---hHHHHHHHHhcccCCeEEEEe
Q 032292 56 AFVDADKDN---YCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 56 v~~d~~~~~---~~~~~~~~~~~L~~gG~li~d 85 (143)
|+++..... ....+..+.++|+|||+++++
T Consensus 148 v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 148 VFLSPPWGGPDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp EEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred EEECCCcCCcchhhhHHHHHHhhcCCcceeHHH
Confidence 999864321 122444567899999998765
No 216
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.41 E-value=1.6e-06 Score=67.30 Aligned_cols=72 Identities=17% Similarity=0.084 Sum_probs=52.1
Q ss_pred hcCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------cCCCCceeEEEEcCCc
Q 032292 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------SENEGSFDYAFVDADK 62 (143)
Q Consensus 17 ~~~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------~~~~~~fD~v~~d~~~ 62 (143)
..++.+|||||||+|..+..+++..+. .+ ......+|+|++....
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl 266 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFPE-LDSTILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEADAVLFCRIL 266 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCTT-CEEEEEECGGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCCSEEEEESCG
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCCC-CeEEEEecHHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCCCEEEEechh
Confidence 356789999999999999999998763 11 1112345999986543
Q ss_pred cc-----hHHHHHHHHhcccCCeEEEEeccCC
Q 032292 63 DN-----YCNYHERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 63 ~~-----~~~~~~~~~~~L~~gG~li~d~~~~ 89 (143)
.+ ....++++.+.|+|||.+++.+...
T Consensus 267 h~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 267 YSANEQLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp GGSCHHHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred ccCCHHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 22 4567899999999999997655443
No 217
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.40 E-value=5.7e-07 Score=68.52 Aligned_cols=68 Identities=13% Similarity=-0.004 Sum_probs=48.3
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCCC----------------------------C--c-----------c----C--CCC
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPED----------------------------G--Q-----------S----E--NEG 51 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~~----------------------------~--~-----------~----~--~~~ 51 (143)
++.+|||+|||+|..+..+++..... . . + . ..+
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 67899999999999999888642100 0 0 1 1 134
Q ss_pred ceeEEEEcCCc-------cchHHHHHHHHhcccCCeEEEEec
Q 032292 52 SFDYAFVDADK-------DNYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 52 ~fD~v~~d~~~-------~~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
+||+|++.... .+....++.+.++|+|||++++..
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 89999987543 123478899999999999999864
No 218
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.40 E-value=4.2e-07 Score=71.81 Aligned_cols=73 Identities=22% Similarity=0.304 Sum_probs=52.5
Q ss_pred HHhhc-CCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------------cC---CCCce
Q 032292 14 LLRLV-NAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------SE---NEGSF 53 (143)
Q Consensus 14 l~~~~-~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------~~---~~~~f 53 (143)
++... +.++|||+|||+|..++.+|+.-..... +. ..++|
T Consensus 211 ~~~~~~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~f 290 (396)
T 2as0_A 211 LEKWVQPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKF 290 (396)
T ss_dssp HGGGCCTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred HHHHhhCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCC
Confidence 33444 6789999999999999999986111000 00 14689
Q ss_pred eEEEEcCCc------------cchHHHHHHHHhcccCCeEEEEec
Q 032292 54 DYAFVDADK------------DNYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 54 D~v~~d~~~------------~~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
|+|++|... ..+...+..+.++|+|||++++..
T Consensus 291 D~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 335 (396)
T 2as0_A 291 DIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCS 335 (396)
T ss_dssp EEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 999998642 345667888999999999887753
No 219
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.40 E-value=1.7e-07 Score=73.85 Aligned_cols=73 Identities=25% Similarity=0.357 Sum_probs=52.9
Q ss_pred HHHhhcCCCEEEEEeccccHHHHHHHhhCCC-CCc---------------------------------c---CCCCceeE
Q 032292 13 MLLRLVNAKKTIEIGVFTGYSLLLTALTIPE-DGQ---------------------------------S---ENEGSFDY 55 (143)
Q Consensus 13 ~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~-~~~---------------------------------~---~~~~~fD~ 55 (143)
.++.. +.++|||+|||+|..++.+|+.... .+. + ...++||+
T Consensus 204 ~~~~~-~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~ 282 (382)
T 1wxx_A 204 YMERF-RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDL 282 (382)
T ss_dssp HGGGC-CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred HHHhc-CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeE
Confidence 34444 6789999999999999999987210 000 0 01468999
Q ss_pred EEEcCCc------------cchHHHHHHHHhcccCCeEEEEec
Q 032292 56 AFVDADK------------DNYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 56 v~~d~~~------------~~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
|++|... ..+...+..+.++|+|||++++..
T Consensus 283 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 325 (382)
T 1wxx_A 283 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATAS 325 (382)
T ss_dssp EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9998632 345667888999999999998753
No 220
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.39 E-value=9.5e-08 Score=71.37 Aligned_cols=39 Identities=31% Similarity=0.189 Sum_probs=30.3
Q ss_pred CCceeEEEEcCCc-------cchHHHHHHHHhcccCCeEEEEeccC
Q 032292 50 EGSFDYAFVDADK-------DNYCNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 50 ~~~fD~v~~d~~~-------~~~~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
.++||+|++.... .++...++++.++|||||++++....
T Consensus 154 ~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 154 LPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp CCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred cCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 4689999986421 34567888999999999999987643
No 221
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.37 E-value=1.2e-06 Score=68.35 Aligned_cols=71 Identities=14% Similarity=0.063 Sum_probs=52.9
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc---------------------------------cCCCCceeEEEEcCCccc
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------------------SENEGSFDYAFVDADKDN 64 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------------------~~~~~~fD~v~~d~~~~~ 64 (143)
.+..+|||||||+|..++.++++.|. .+ ......+|++++.....+
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~-~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~~~D~~~~~~vlh~ 256 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPG-CKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLYILARVLHD 256 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSS-CEEEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTSCCCCCSEEEEESSGGG
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCC-ceeEeccCHHHHHHHHHhhhhcccCceeeecCccccCCCCCceEEEeeeeccc
Confidence 45689999999999999999999885 22 122345899988654333
Q ss_pred h-----HHHHHHHHhcccCCeEEEEeccCC
Q 032292 65 Y-----CNYHERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 65 ~-----~~~~~~~~~~L~~gG~li~d~~~~ 89 (143)
+ ...++++.+.|+|||.+++-+.+.
T Consensus 257 ~~d~~~~~iL~~~~~al~pgg~lli~e~~~ 286 (353)
T 4a6d_A 257 WADGKCSHLLERIYHTCKPGGGILVIESLL 286 (353)
T ss_dssp SCHHHHHHHHHHHHHHCCTTCEEEEEECCC
T ss_pred CCHHHHHHHHHHHHhhCCCCCEEEEEEeee
Confidence 2 356889999999999877665543
No 222
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.36 E-value=1.2e-06 Score=69.10 Aligned_cols=80 Identities=20% Similarity=0.218 Sum_probs=54.2
Q ss_pred hHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc--------------------------cCCCCceeEEEE
Q 032292 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ--------------------------SENEGSFDYAFV 58 (143)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~--------------------------~~~~~~fD~v~~ 58 (143)
+...+++..++...++.+|||+|||+|..++.+++....... ....++||+|++
T Consensus 25 ~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a~~~~~~~~D~~~~~~~~~fD~Ii~ 104 (421)
T 2ih2_A 25 PEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLPPWAEGILADFLLWEPGEAFDLILG 104 (421)
T ss_dssp HHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCCTTEEEEESCGGGCCCSSCEEEEEE
T ss_pred HHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhCCCCcEEeCChhhcCccCCCCEEEE
Confidence 444556666555445679999999999999999976421111 122468999999
Q ss_pred cCC-----c---------c------------------chHHHHHHHHhcccCCeEEEE
Q 032292 59 DAD-----K---------D------------------NYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 59 d~~-----~---------~------------------~~~~~~~~~~~~L~~gG~li~ 84 (143)
+-. . . .+...++.+.++|+|||.+++
T Consensus 105 NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~ 162 (421)
T 2ih2_A 105 NPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVF 162 (421)
T ss_dssp CCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEE
T ss_pred CcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEE
Confidence 521 0 0 122557888899999998876
No 223
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.36 E-value=9.2e-07 Score=66.67 Aligned_cols=68 Identities=15% Similarity=0.023 Sum_probs=47.9
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCC--------C---------C-------------c----cCCCCceeEEEEcCCc-
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPE--------D---------G-------------Q----SENEGSFDYAFVDADK- 62 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~--------~---------~-------------~----~~~~~~fD~v~~d~~~- 62 (143)
.+..+|||+|||+|.++..+++. .. . . . ...+++||+|++|...
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~V~sd~~~~ 151 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLPVERTDVIMCDVGES 151 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS-TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc-CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCCCCCCcEEEEeCccc
Confidence 35679999999999999999875 10 0 0 0 1124679999998641
Q ss_pred -cch-------HHHHHHHHhcccCCe--EEEEec
Q 032292 63 -DNY-------CNYHERLMKLLKVGG--IAVYDN 86 (143)
Q Consensus 63 -~~~-------~~~~~~~~~~L~~gG--~li~d~ 86 (143)
.++ ...++.+.++|+||| .+++..
T Consensus 152 ~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 152 SPKWSVESERTIKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CCccchhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 111 136788889999999 998853
No 224
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.34 E-value=5.4e-07 Score=66.15 Aligned_cols=67 Identities=12% Similarity=-0.030 Sum_probs=44.5
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCC--------C---C-------c-------------------cCC---CCceeEEE
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPE--------D---G-------Q-------------------SEN---EGSFDYAF 57 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~--------~---~-------~-------------------~~~---~~~fD~v~ 57 (143)
.++.+|||||||+|..+..+|+..+. + - + ... .+.+|.|+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 36689999999999999999965332 1 0 0 000 13455555
Q ss_pred EcCCc--------cchHHHHHHHHhcccCCeEEEE
Q 032292 58 VDADK--------DNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 58 ~d~~~--------~~~~~~~~~~~~~L~~gG~li~ 84 (143)
+.-.. ..+...++++.++|||||.+++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 103 ILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 43211 1234578899999999999988
No 225
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.33 E-value=3.4e-07 Score=68.47 Aligned_cols=77 Identities=8% Similarity=0.009 Sum_probs=53.5
Q ss_pred HHHHHhhc-CCCEEEEEeccccHHHHHHHhhCCCC-Cc----------------------------------cCCCC-ce
Q 032292 11 MAMLLRLV-NAKKTIEIGVFTGYSLLLTALTIPED-GQ----------------------------------SENEG-SF 53 (143)
Q Consensus 11 l~~l~~~~-~~~~vLeiG~g~G~~t~~la~~~~~~-~~----------------------------------~~~~~-~f 53 (143)
|..++... +..+|||||||+|+.++.+|+..+.. .. ....+ +|
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~ 91 (244)
T 3gnl_A 12 LEKVASYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAI 91 (244)
T ss_dssp HHHHHTTCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCC
T ss_pred HHHHHHhCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccc
Confidence 44455544 45799999999999999999875421 00 11223 59
Q ss_pred eEEEEcCC-ccchHHHHHHHHhcccCCeEEEEecc
Q 032292 54 DYAFVDAD-KDNYCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 54 D~v~~d~~-~~~~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
|+|++.+- ..-....++...+.|++++.+|+...
T Consensus 92 D~IviagmGg~lI~~IL~~~~~~L~~~~~lIlq~~ 126 (244)
T 3gnl_A 92 DTIVIAGMGGTLIRTILEEGAAKLAGVTKLILQPN 126 (244)
T ss_dssp CEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred cEEEEeCCchHHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 99987542 23356678888899999999988653
No 226
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.32 E-value=9.8e-07 Score=66.91 Aligned_cols=66 Identities=11% Similarity=0.001 Sum_probs=47.2
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCC--------C---------C------c-----------cCCCCceeEEEEcCCc--
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPE--------D---------G------Q-----------SENEGSFDYAFVDADK-- 62 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~--------~---------~------~-----------~~~~~~fD~v~~d~~~-- 62 (143)
+..+|||+|||+|.++..+++. .. . . . ...+++||+|++|...
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~Vvsd~~~~~ 160 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ-PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKMEPFQADTVLCDIGESN 160 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS-TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCCCCCCSEEEECCCCCC
T ss_pred CCCEEEEeccCCCHHHHHHHHc-CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCCCCCcCEEEECCCcCC
Confidence 5679999999999999999875 10 0 0 0 1124689999998641
Q ss_pred cch-------HHHHHHHHhcccCCe--EEEEe
Q 032292 63 DNY-------CNYHERLMKLLKVGG--IAVYD 85 (143)
Q Consensus 63 ~~~-------~~~~~~~~~~L~~gG--~li~d 85 (143)
.++ ...++.+.++|+||| .++++
T Consensus 161 ~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 161 PTAAVEASRTLTVLNVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred CchhhhHHHHHHHHHHHHHHhccCCCcEEEEE
Confidence 111 136788889999999 88885
No 227
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.32 E-value=8.2e-07 Score=72.22 Aligned_cols=65 Identities=14% Similarity=0.118 Sum_probs=47.8
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------c-CCCCceeEEEEcCC-
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------S-ENEGSFDYAFVDAD- 61 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------~-~~~~~fD~v~~d~~- 61 (143)
.++++|||||||+|..++.+++. +. .+ . ...++||+|+++.-
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~-~~-~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~fD~Ivs~~~~ 234 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQA-GA-RKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMG 234 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHT-TC-SEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCH
T ss_pred cCCCEEEEecCcccHHHHHHHHc-CC-CEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccCCCeEEEEEeCch
Confidence 46789999999999999998874 21 11 1 12468999998653
Q ss_pred ----ccchHHHHHHHHhcccCCeEEEE
Q 032292 62 ----KDNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 62 ----~~~~~~~~~~~~~~L~~gG~li~ 84 (143)
...+...+..+.++|+|||++++
T Consensus 235 ~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 235 YMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred HhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 12345567777899999999984
No 228
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.30 E-value=1e-06 Score=69.71 Aligned_cols=73 Identities=21% Similarity=0.235 Sum_probs=53.4
Q ss_pred HHhhcCCCEEEEEeccccHHHHHHHhhCCCC----------------------C---c------------c---CCCCce
Q 032292 14 LLRLVNAKKTIEIGVFTGYSLLLTALTIPED----------------------G---Q------------S---ENEGSF 53 (143)
Q Consensus 14 l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~----------------------~---~------------~---~~~~~f 53 (143)
++...+.++|||+|||+|..++.+|+..... - . + ...++|
T Consensus 215 l~~~~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~f 294 (396)
T 3c0k_A 215 TRRYVENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKF 294 (396)
T ss_dssp HHHHCTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred HHHhhCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCC
Confidence 3344578899999999999999999863110 0 1 0 013589
Q ss_pred eEEEEcCCc------------cchHHHHHHHHhcccCCeEEEEec
Q 032292 54 DYAFVDADK------------DNYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 54 D~v~~d~~~------------~~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
|+|++|... ..+...+..+.+.|+|||++++..
T Consensus 295 D~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 339 (396)
T 3c0k_A 295 DVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFS 339 (396)
T ss_dssp EEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 999998532 456778888999999999998753
No 229
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.29 E-value=4.5e-06 Score=62.92 Aligned_cols=70 Identities=6% Similarity=-0.061 Sum_probs=50.4
Q ss_pred CCCEEEEEeccc---cHHHHHHHhhCCCCCc-----------------------------cC----------------CC
Q 032292 19 NAKKTIEIGVFT---GYSLLLTALTIPEDGQ-----------------------------SE----------------NE 50 (143)
Q Consensus 19 ~~~~vLeiG~g~---G~~t~~la~~~~~~~~-----------------------------~~----------------~~ 50 (143)
...+|||||||+ |..+..+++..+. ++ .. ..
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~-~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~ 155 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPD-ARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDF 155 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTT-CEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCC-CEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCC
Confidence 458999999999 9887776665543 22 00 01
Q ss_pred CceeEEEEcCCc---c--chHHHHHHHHhcccCCeEEEEeccCC
Q 032292 51 GSFDYAFVDADK---D--NYCNYHERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 51 ~~fD~v~~d~~~---~--~~~~~~~~~~~~L~~gG~li~d~~~~ 89 (143)
++||+|++.... . .....++++.+.|+|||+|++.+...
T Consensus 156 ~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 156 SRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp TSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 368999987532 1 25678999999999999999876543
No 230
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.27 E-value=5.6e-06 Score=58.84 Aligned_cols=78 Identities=12% Similarity=0.081 Sum_probs=49.5
Q ss_pred hHHHHHHHHHHh---hcCCCEEEEEeccccHHHHHHHhhCCCC-Cc--------------------------cCCCCcee
Q 032292 5 TIHGQLMAMLLR---LVNAKKTIEIGVFTGYSLLLTALTIPED-GQ--------------------------SENEGSFD 54 (143)
Q Consensus 5 ~~~~~~l~~l~~---~~~~~~vLeiG~g~G~~t~~la~~~~~~-~~--------------------------~~~~~~fD 54 (143)
+...+.+..++. ..++.+|||+|||+|..+..+++. +.. .. ....++||
T Consensus 34 ~~~~~~l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~D 112 (200)
T 1ne2_A 34 ASTAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEISGKYD 112 (200)
T ss_dssp HHHHHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCCCCEE
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCCCCee
Confidence 344444444443 236789999999999999999876 221 00 11246899
Q ss_pred EEEEcCCc-----cchHHHHHHHHhcccCCeEEEEe
Q 032292 55 YAFVDADK-----DNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 55 ~v~~d~~~-----~~~~~~~~~~~~~L~~gG~li~d 85 (143)
+|+++... .....+++.+.+.+ |+++++.
T Consensus 113 ~v~~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~~ 146 (200)
T 1ne2_A 113 TWIMNPPFGSVVKHSDRAFIDKAFETS--MWIYSIG 146 (200)
T ss_dssp EEEECCCC-------CHHHHHHHHHHE--EEEEEEE
T ss_pred EEEECCCchhccCchhHHHHHHHHHhc--CcEEEEE
Confidence 99998642 12345778888887 5655554
No 231
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.26 E-value=1.9e-06 Score=66.78 Aligned_cols=72 Identities=10% Similarity=0.063 Sum_probs=52.4
Q ss_pred hcCCCEEEEEeccccHHHHHHHhhCCCCCc------------------------c--CCCCceeEEEEcCCcc---ch--
Q 032292 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------S--ENEGSFDYAFVDADKD---NY-- 65 (143)
Q Consensus 17 ~~~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------~--~~~~~fD~v~~d~~~~---~~-- 65 (143)
..+..+|||||||+|..+..+++..+. .+ . .....||+|++..... +.
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~p~~D~v~~~~~lh~~~d~~~ 264 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPK-LKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDC 264 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEECHHHHTTCCCBTTEEEEECCTTTCCCCCSEEEEESCGGGSCHHHH
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCC-CeEEEeeCHHHHhhcccCCCcEEEeccccCCCCCccEEEeehhhccCCHHHH
Confidence 346689999999999999999988763 11 1 1112499999865432 22
Q ss_pred HHHHHHHHhcccC---CeEEEEeccCC
Q 032292 66 CNYHERLMKLLKV---GGIAVYDNTLW 89 (143)
Q Consensus 66 ~~~~~~~~~~L~~---gG~li~d~~~~ 89 (143)
...++++.+.|+| ||.+++.+...
T Consensus 265 ~~~l~~~~~~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 265 LRILKKCKEAVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp HHHHHHHHHHHSGGGCCCEEEEEECEE
T ss_pred HHHHHHHHHhCCCCCCCcEEEEEEeec
Confidence 2688999999999 99988766543
No 232
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.26 E-value=1.4e-06 Score=68.90 Aligned_cols=69 Identities=12% Similarity=0.202 Sum_probs=48.7
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCC-------------------------c------------cC---CCCceeEEE
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDG-------------------------Q------------SE---NEGSFDYAF 57 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~-------------------------~------------~~---~~~~fD~v~ 57 (143)
.+.++|||+|||+|..++.+|+...... . +. ..++||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 5678999999999999999997421100 0 00 134899999
Q ss_pred EcCCc------------cchHHHHHHHHhcccCCeEEEEec
Q 032292 58 VDADK------------DNYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 58 ~d~~~------------~~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
+|... ..|...+..+.++|+|||++++..
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~ 331 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIAST 331 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 97422 124445677789999999998864
No 233
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.25 E-value=1.2e-06 Score=68.83 Aligned_cols=67 Identities=21% Similarity=0.214 Sum_probs=48.1
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCCCCc----------------c---------------------------C---CCCc
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------S---------------------------E---NEGS 52 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------~---------------------------~---~~~~ 52 (143)
+|++||+||||+|..+..+++..+.... + . ..++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 5799999999999999998876431000 1 0 1367
Q ss_pred eeEEEEcCCc-c--------chHHHHHHH----HhcccCCeEEEEe
Q 032292 53 FDYAFVDADK-D--------NYCNYHERL----MKLLKVGGIAVYD 85 (143)
Q Consensus 53 fD~v~~d~~~-~--------~~~~~~~~~----~~~L~~gG~li~d 85 (143)
||+|++|... . ...++++.+ .++|+|||++++.
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~q 313 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 313 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEE
Confidence 9999999743 1 113455555 8999999999876
No 234
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.23 E-value=1.8e-06 Score=63.68 Aligned_cols=32 Identities=16% Similarity=0.111 Sum_probs=24.2
Q ss_pred HHHHHHHhh---cCCCEEEEEeccccHHHHHHHhh
Q 032292 9 QLMAMLLRL---VNAKKTIEIGVFTGYSLLLTALT 40 (143)
Q Consensus 9 ~~l~~l~~~---~~~~~vLeiG~g~G~~t~~la~~ 40 (143)
+++..+... .++.+|||+|||+|..++.+++.
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~ 72 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLL 72 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHH
Confidence 445544433 24679999999999999999876
No 235
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.20 E-value=3.5e-06 Score=65.43 Aligned_cols=72 Identities=11% Similarity=0.031 Sum_probs=52.7
Q ss_pred hcCCCEEEEEeccccHHHHHHHhhCCCCCc------------------------c--CCCCceeEEEEcCCcc---c--h
Q 032292 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------S--ENEGSFDYAFVDADKD---N--Y 65 (143)
Q Consensus 17 ~~~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------~--~~~~~fD~v~~d~~~~---~--~ 65 (143)
..+..+|||||||+|..+..+++..+. .+ . ....+||+|++..... + .
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~~~~D~v~~~~vlh~~~d~~~ 269 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIFPH-LKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPSADAVLLKWVLHDWNDEQS 269 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHCTT-SEEEEEECHHHHSSCCCCSSEEEEECCTTTCCCCCSEEEEESCGGGSCHHHH
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHCCC-CeEEEeccHHHHhhcccCCCcEEEeCccCCCCCCceEEEEcccccCCCHHHH
Confidence 346789999999999999999998763 11 0 1122599999875432 2 2
Q ss_pred HHHHHHHHhcccC---CeEEEEeccCC
Q 032292 66 CNYHERLMKLLKV---GGIAVYDNTLW 89 (143)
Q Consensus 66 ~~~~~~~~~~L~~---gG~li~d~~~~ 89 (143)
...++++.+.|+| ||.+++.+...
T Consensus 270 ~~~l~~~~~~L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 270 LKILKNSKEAISHKGKDGKVIIIDISI 296 (358)
T ss_dssp HHHHHHHHHHTGGGGGGCEEEEEECEE
T ss_pred HHHHHHHHHhCCCCCCCcEEEEEEecc
Confidence 3788999999999 99888755543
No 236
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.20 E-value=2.8e-06 Score=64.10 Aligned_cols=67 Identities=16% Similarity=0.167 Sum_probs=48.1
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCC-----CC-c----------c----------------------------C-----
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPE-----DG-Q----------S----------------------------E----- 48 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~-----~~-~----------~----------------------------~----- 48 (143)
.+.++|||+|||+|..++.+++.... +. . . .
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 46789999999999999998875321 01 0 0 0
Q ss_pred --CCCceeEEEE-cCC--ccchHHHHHHHHhccc---C--CeEEEE
Q 032292 49 --NEGSFDYAFV-DAD--KDNYCNYHERLMKLLK---V--GGIAVY 84 (143)
Q Consensus 49 --~~~~fD~v~~-d~~--~~~~~~~~~~~~~~L~---~--gG~li~ 84 (143)
..++||+|++ |.- ..++...++.+.++|+ | ||++++
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp HHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred hccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 1357999987 432 2456778999999999 9 997655
No 237
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.19 E-value=8.9e-06 Score=65.16 Aligned_cols=82 Identities=18% Similarity=0.120 Sum_probs=52.3
Q ss_pred cChHHHHHH-HHHHhhcCCCEEEEEeccccHHHHHHHhhCCC-CCc-----------------------------cCCCC
Q 032292 3 LLTIHGQLM-AMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE-DGQ-----------------------------SENEG 51 (143)
Q Consensus 3 ~~~~~~~~l-~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~-~~~-----------------------------~~~~~ 51 (143)
..+...+.| ..+....+..+|||+|||+|..++.+|+.... .+. .....
T Consensus 273 ~n~~~~e~l~~~~~~~~~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~~ 352 (425)
T 2jjq_A 273 TNSYQAVNLVRKVSELVEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSVK 352 (425)
T ss_dssp SBHHHHHHHHHHHHHHCCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCCT
T ss_pred cCHHHHHHHHHHhhccCCCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCcc
Confidence 344444433 33333556789999999999999999986321 000 11223
Q ss_pred ceeEEEEcCCccchH-HHHHHHHhcccCCeEEEEe
Q 032292 52 SFDYAFVDADKDNYC-NYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 52 ~fD~v~~d~~~~~~~-~~~~~~~~~L~~gG~li~d 85 (143)
+||+|++|.....+. ..++.+ ..|+|+|++++.
T Consensus 353 ~fD~Vv~dPPr~g~~~~~~~~l-~~l~p~givyvs 386 (425)
T 2jjq_A 353 GFDTVIVDPPRAGLHPRLVKRL-NREKPGVIVYVS 386 (425)
T ss_dssp TCSEEEECCCTTCSCHHHHHHH-HHHCCSEEEEEE
T ss_pred CCCEEEEcCCccchHHHHHHHH-HhcCCCcEEEEE
Confidence 799999986533333 344444 468999999874
No 238
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.17 E-value=3.8e-06 Score=65.10 Aligned_cols=67 Identities=7% Similarity=0.066 Sum_probs=48.1
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCC-CCc-------------------------------cCCCCceeEEEEcCCccch
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPE-DGQ-------------------------------SENEGSFDYAFVDADKDNY 65 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~-~~~-------------------------------~~~~~~fD~v~~d~~~~~~ 65 (143)
.+..+|||+|||+|..++. |+.... .+. ... ++||+|++|... ..
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~-~~fD~Vi~dpP~-~~ 270 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD-VKGNRVIMNLPK-FA 270 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC-CCEEEEEECCTT-TG
T ss_pred CCCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc-CCCcEEEECCcH-hH
Confidence 4778999999999999999 873110 000 111 689999998532 23
Q ss_pred HHHHHHHHhcccCCeEEEEecc
Q 032292 66 CNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 66 ~~~~~~~~~~L~~gG~li~d~~ 87 (143)
...++.+.++|+|||++++...
T Consensus 271 ~~~l~~~~~~L~~gG~l~~~~~ 292 (336)
T 2yx1_A 271 HKFIDKALDIVEEGGVIHYYTI 292 (336)
T ss_dssp GGGHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEEe
Confidence 4678888999999999987543
No 239
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.16 E-value=1.5e-05 Score=56.65 Aligned_cols=79 Identities=11% Similarity=0.008 Sum_probs=50.5
Q ss_pred ChHHHHHHHHHHh---hcCCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------cCCC
Q 032292 4 LTIHGQLMAMLLR---LVNAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------SENE 50 (143)
Q Consensus 4 ~~~~~~~l~~l~~---~~~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------~~~~ 50 (143)
++...+.+...+. ..++.+|||+|||+|..+..+++....... ....
T Consensus 31 ~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~ 110 (207)
T 1wy7_A 31 PGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN 110 (207)
T ss_dssp CHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC
T ss_pred chHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC
Confidence 3444444444443 235789999999999999999876321000 1124
Q ss_pred CceeEEEEcCCc-----cchHHHHHHHHhcccCCeEEEE
Q 032292 51 GSFDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 51 ~~fD~v~~d~~~-----~~~~~~~~~~~~~L~~gG~li~ 84 (143)
++||+|+++... .....+++.+.+.+ |+++++
T Consensus 111 ~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~ 147 (207)
T 1wy7_A 111 SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSI 147 (207)
T ss_dssp CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEE
T ss_pred CCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEEE
Confidence 589999998631 23356788888887 666654
No 240
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.15 E-value=8.2e-06 Score=62.34 Aligned_cols=67 Identities=15% Similarity=0.194 Sum_probs=46.4
Q ss_pred hcCCCEEEEEec------cccHHHHHHHhhCCCCCc--------------c---------CCCCceeEEEEcCCcc----
Q 032292 17 LVNAKKTIEIGV------FTGYSLLLTALTIPEDGQ--------------S---------ENEGSFDYAFVDADKD---- 63 (143)
Q Consensus 17 ~~~~~~vLeiG~------g~G~~t~~la~~~~~~~~--------------~---------~~~~~fD~v~~d~~~~---- 63 (143)
..+..+|||+|| |+|. ..+++.+++.++ . ...++||+|++|....
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~v~~v~~~i~gD~~~~~~~~~fD~Vvsn~~~~~~g~ 138 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATVHTANKWDLIISDMYDPRTKH 138 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBCSSSEEEESCGGGCCCSSCEEEEEECCCCCC---
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCCCCCCEEEEECccccCCccCcccEEEEcCCcccccc
Confidence 345679999999 4466 445666653222 0 1236799999975321
Q ss_pred ----------chHHHHHHHHhcccCCeEEEEe
Q 032292 64 ----------NYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 64 ----------~~~~~~~~~~~~L~~gG~li~d 85 (143)
.+...++.+.++|+|||.+++.
T Consensus 139 ~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~ 170 (290)
T 2xyq_A 139 VTKENDSKEGFFTYLCGFIKQKLALGGSIAVK 170 (290)
T ss_dssp CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccccchHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 1346788999999999999985
No 241
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.13 E-value=3.7e-06 Score=65.17 Aligned_cols=79 Identities=16% Similarity=0.096 Sum_probs=53.5
Q ss_pred HHHHHHHHHHh----hcCCCEEEEEeccccHHHHHHHhhCCCC----Cc-------------------------------
Q 032292 6 IHGQLMAMLLR----LVNAKKTIEIGVFTGYSLLLTALTIPED----GQ------------------------------- 46 (143)
Q Consensus 6 ~~~~~l~~l~~----~~~~~~vLeiG~g~G~~t~~la~~~~~~----~~------------------------------- 46 (143)
....++..++. ..+..+|||+|||+|..++.+++.++.. ..
T Consensus 113 ~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D 192 (344)
T 2f8l_A 113 SIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQD 192 (344)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESC
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECC
Confidence 34444444442 2245799999999999999988776421 11
Q ss_pred ---cCCCCceeEEEEcCCcc---------------------chHHHHHHHHhcccCCeEEEE
Q 032292 47 ---SENEGSFDYAFVDADKD---------------------NYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 47 ---~~~~~~fD~v~~d~~~~---------------------~~~~~~~~~~~~L~~gG~li~ 84 (143)
+...++||+|+++.... .+..+++.+.++|+|||++++
T Consensus 193 ~l~~~~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~ 254 (344)
T 2f8l_A 193 GLANLLVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFF 254 (344)
T ss_dssp TTSCCCCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEE
T ss_pred CCCccccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEE
Confidence 12246899999985411 112578889999999998876
No 242
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.13 E-value=3.7e-06 Score=63.91 Aligned_cols=69 Identities=16% Similarity=0.062 Sum_probs=50.5
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------cCCCCceeEEEEcCCcc
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------SENEGSFDYAFVDADKD 63 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------~~~~~~fD~v~~d~~~~ 63 (143)
.+.++|||+|||+|+.++.+|+....... ....+.||.|+++....
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p~~ 203 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVVR 203 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCSS
T ss_pred CCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECCCCc
Confidence 46789999999999999999887432100 12356799999986432
Q ss_pred chHHHHHHHHhcccCCeEEEEecc
Q 032292 64 NYCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 64 ~~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
-..+++.+.++|++||+|.++..
T Consensus 204 -~~~~l~~a~~~lk~gG~ih~~~~ 226 (278)
T 3k6r_A 204 -THEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp -GGGGHHHHHHHEEEEEEEEEEEE
T ss_pred -HHHHHHHHHHHcCCCCEEEEEee
Confidence 23567788899999999977543
No 243
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.09 E-value=1e-05 Score=63.50 Aligned_cols=39 Identities=18% Similarity=0.049 Sum_probs=31.0
Q ss_pred cChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCC
Q 032292 3 LLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIP 42 (143)
Q Consensus 3 ~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~ 42 (143)
+.+.....|..++ ..+..+|||+|||+|..++.+|...+
T Consensus 202 l~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~ 240 (373)
T 3tm4_A 202 LKASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRY 240 (373)
T ss_dssp CCHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTC
T ss_pred ccHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCC
Confidence 3455566666666 66788999999999999999998765
No 244
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.03 E-value=1.2e-05 Score=61.47 Aligned_cols=69 Identities=22% Similarity=0.221 Sum_probs=52.6
Q ss_pred hcCCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------------------cCCCCceeE
Q 032292 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------------------------SENEGSFDY 55 (143)
Q Consensus 17 ~~~~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------------------------~~~~~~fD~ 55 (143)
..+|++||-||-|.|..+..+++..+.... ....++||+
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDv 160 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEE
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCE
Confidence 357999999999999999999876442100 234578999
Q ss_pred EEEcCCccc------h-HHHHHHHHhcccCCeEEEEe
Q 032292 56 AFVDADKDN------Y-CNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 56 v~~d~~~~~------~-~~~~~~~~~~L~~gG~li~d 85 (143)
|++|..... | .++++.+.+.|+|||+++..
T Consensus 161 Ii~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp EEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEE
T ss_pred EEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEe
Confidence 999974221 1 36889999999999999875
No 245
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.00 E-value=2.3e-05 Score=59.25 Aligned_cols=68 Identities=7% Similarity=-0.115 Sum_probs=49.6
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------cCCCCceeEEEEcCCcc
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------SENEGSFDYAFVDADKD 63 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------~~~~~~fD~v~~d~~~~ 63 (143)
..|.+|||||||+|..++.++...+. .+ ....++||++++.-...
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~-a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~lkti~ 209 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAE-TVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLKTLP 209 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTT-CEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEETTCHH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCC-CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHHHHHHH
Confidence 45899999999999999988776553 32 23478899998864322
Q ss_pred chH-----HHHHHHHhcccCCeEEEEecc
Q 032292 64 NYC-----NYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 64 ~~~-----~~~~~~~~~L~~gG~li~d~~ 87 (143)
... ..+ +++..|+++|++|.-+.
T Consensus 210 ~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 210 CLETQQRGSGW-EVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp HHHHHSTTHHH-HHHHHSSCSEEEEEEEC
T ss_pred HhhhhhhHHHH-HHHHHhCCCCEEEeccc
Confidence 111 245 78899999999986554
No 246
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=97.99 E-value=0.00018 Score=53.84 Aligned_cols=68 Identities=12% Similarity=0.009 Sum_probs=46.1
Q ss_pred HHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------cCCCCceeEEEEc
Q 032292 14 LLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------SENEGSFDYAFVD 59 (143)
Q Consensus 14 l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------~~~~~~fD~v~~d 59 (143)
+.....|.+|||||||+|..++.++ +. .+ ....++||+|++.
T Consensus 100 i~~~~~p~~VLDlGCG~gpLal~~~---~~-~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLll 175 (253)
T 3frh_A 100 IFSAETPRRVLDIACGLNPLALYER---GI-ASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIF 175 (253)
T ss_dssp HTSSCCCSEEEEETCTTTHHHHHHT---TC-SEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEE
T ss_pred HhcCCCCCeEEEecCCccHHHHHhc---cC-CeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHHH
Confidence 3344568999999999999999876 22 21 2346799999876
Q ss_pred CCccch-----HHHHHHHHhcccCCeEEEEec
Q 032292 60 ADKDNY-----CNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 60 ~~~~~~-----~~~~~~~~~~L~~gG~li~d~ 86 (143)
-..+.. ...+ .++..|++++++|.-+
T Consensus 176 k~lh~LE~q~~~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 176 KLLPLLEREQAGSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp SCHHHHHHHSTTHHH-HHHHHCBCSEEEEEEE
T ss_pred HHHHHhhhhchhhHH-HHHHHhcCCCEEEEcC
Confidence 321111 1233 7778999999998654
No 247
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.98 E-value=1.8e-05 Score=62.47 Aligned_cols=68 Identities=18% Similarity=0.185 Sum_probs=51.5
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc-------------------c---------------CC--------------
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ-------------------S---------------EN-------------- 49 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~-------------------~---------------~~-------------- 49 (143)
.++.+|||+|||+|..++.+|+..+.... . ..
T Consensus 46 ~~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~ 125 (378)
T 2dul_A 46 LNPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLM 125 (378)
T ss_dssp HCCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHH
T ss_pred cCCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHH
Confidence 47899999999999999999998653100 1 11
Q ss_pred ---CCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 032292 50 ---EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 50 ---~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
.++||+|++|.- .....+++.+.+.|++||++.+..
T Consensus 126 ~~~~~~fD~I~lDP~-~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 126 AERHRYFHFIDLDPF-GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHSTTCEEEEEECCS-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhccCCCCEEEeCCC-CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 247999999863 334678888999999999887753
No 248
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=97.94 E-value=3.8e-06 Score=61.93 Aligned_cols=38 Identities=16% Similarity=0.083 Sum_probs=28.2
Q ss_pred hHHHHHHHHHHhhc-----CCCEEEEEeccccHHHHHHHhhCC
Q 032292 5 TIHGQLMAMLLRLV-----NAKKTIEIGVFTGYSLLLTALTIP 42 (143)
Q Consensus 5 ~~~~~~l~~l~~~~-----~~~~vLeiG~g~G~~t~~la~~~~ 42 (143)
++...++..++... ++.+|||+|||+|..++.+++..+
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~ 88 (254)
T 2h00_A 46 LNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLN 88 (254)
T ss_dssp HHHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCC
Confidence 45556666666533 457999999999999999887643
No 249
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=97.93 E-value=3.5e-05 Score=58.30 Aligned_cols=38 Identities=13% Similarity=-0.042 Sum_probs=29.4
Q ss_pred ChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhC
Q 032292 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTI 41 (143)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~ 41 (143)
++...+.+...+...+..+|||||||+|..|..+++..
T Consensus 13 d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~ 50 (285)
T 1zq9_A 13 NPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKA 50 (285)
T ss_dssp CHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHS
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhC
Confidence 45555555555556677899999999999999999874
No 250
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.93 E-value=1.1e-05 Score=63.99 Aligned_cols=66 Identities=20% Similarity=0.138 Sum_probs=49.9
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCCCCc---------------------------------------c-CCCCceeEEEE
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------------------------S-ENEGSFDYAFV 58 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------------------------~-~~~~~fD~v~~ 58 (143)
+..+|||++||+|..++.+|+..+..+. . ...++||+|++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 4689999999999999999986531011 1 12347999999
Q ss_pred cCCccchHHHHHHHHhcccCCeEEEEe
Q 032292 59 DADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 59 d~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
|. ......+++.+.+.|++||+|++.
T Consensus 132 DP-~g~~~~~l~~a~~~Lk~gGll~~t 157 (392)
T 3axs_A 132 DP-FGTPVPFIESVALSMKRGGILSLT 157 (392)
T ss_dssp CC-SSCCHHHHHHHHHHEEEEEEEEEE
T ss_pred CC-CcCHHHHHHHHHHHhCCCCEEEEE
Confidence 97 333456888899999999988774
No 251
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=97.92 E-value=2.1e-05 Score=61.64 Aligned_cols=65 Identities=14% Similarity=0.105 Sum_probs=47.3
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------c-C---CCCceeEEEEcC
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------S-E---NEGSFDYAFVDA 60 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------~-~---~~~~fD~v~~d~ 60 (143)
++++|||+| |+|..++.+++..+. ++ . . ..++||+|++|.
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~-~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLP-KRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCC-SEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECC
Confidence 478999999 999999999887542 11 1 1 124799999985
Q ss_pred Cc--cchHHHHHHHHhcccCCe-EEEEe
Q 032292 61 DK--DNYCNYHERLMKLLKVGG-IAVYD 85 (143)
Q Consensus 61 ~~--~~~~~~~~~~~~~L~~gG-~li~d 85 (143)
.. ......++.+.+.|+||| ++++.
T Consensus 250 p~~~~~~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 250 PETLEAIRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp CSSHHHHHHHHHHHHHTBCSTTCEEEEE
T ss_pred CCchHHHHHHHHHHHHHcccCCeEEEEE
Confidence 32 124567888999999999 44553
No 252
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.90 E-value=2.5e-05 Score=60.03 Aligned_cols=39 Identities=23% Similarity=0.176 Sum_probs=30.1
Q ss_pred HHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCC
Q 032292 7 HGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDG 45 (143)
Q Consensus 7 ~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~ 45 (143)
...++..++...+..+|||+|||+|..|+.+|+.+++.+
T Consensus 90 ~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g 128 (309)
T 2b9e_A 90 ASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQG 128 (309)
T ss_dssp GGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCS
T ss_pred HHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCC
Confidence 344555566666778999999999999999998865433
No 253
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.88 E-value=2.4e-05 Score=59.32 Aligned_cols=68 Identities=13% Similarity=0.056 Sum_probs=47.4
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCC-----------------CC-----c-----------cCCCCceeEEEEcCCcc-
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPE-----------------DG-----Q-----------SENEGSFDYAFVDADKD- 63 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~-----------------~~-----~-----------~~~~~~fD~v~~d~~~~- 63 (143)
.+..+|||+|||+|-++...++..+. .. . ....++||+|++|....
T Consensus 73 ~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~apns 152 (277)
T 3evf_A 73 KLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIGESS 152 (277)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCCC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCccCc
Confidence 35679999999999999988765211 00 0 22357899999997432
Q ss_pred --chH------HHHHHHHhcccCC-eEEEEe
Q 032292 64 --NYC------NYHERLMKLLKVG-GIAVYD 85 (143)
Q Consensus 64 --~~~------~~~~~~~~~L~~g-G~li~d 85 (143)
.+. ..++.+.++|+|| |.+++.
T Consensus 153 G~~~~D~~rs~~LL~~a~~~LkpG~G~FV~K 183 (277)
T 3evf_A 153 SSSVTEGERTVRVLDTVEKWLACGVDNFCVK 183 (277)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CchHHHHHHHHHHHHHHHHHhCCCCCeEEEE
Confidence 111 1356667999999 999984
No 254
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=97.88 E-value=2e-05 Score=59.65 Aligned_cols=35 Identities=26% Similarity=0.354 Sum_probs=27.0
Q ss_pred CceeEEEEcCCc-----cchHHHHHHHHhcccCCeEEEEe
Q 032292 51 GSFDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 51 ~~fD~v~~d~~~-----~~~~~~~~~~~~~L~~gG~li~d 85 (143)
++||+|++.... ......++.+.+.|+|||++++.
T Consensus 212 ~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 212 GPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp CCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred CCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 579999996532 12256788899999999999874
No 255
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=97.85 E-value=8.6e-05 Score=56.76 Aligned_cols=38 Identities=16% Similarity=-0.037 Sum_probs=29.0
Q ss_pred ChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhC
Q 032292 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTI 41 (143)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~ 41 (143)
++...+-+...+...+..+|||||||+|+.|..+++..
T Consensus 35 d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~ 72 (295)
T 3gru_A 35 DKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNA 72 (295)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS
T ss_pred CHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcC
Confidence 34445555555556677899999999999999999873
No 256
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=97.85 E-value=5.3e-05 Score=57.76 Aligned_cols=37 Identities=14% Similarity=-0.017 Sum_probs=29.2
Q ss_pred ChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhh
Q 032292 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALT 40 (143)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~ 40 (143)
++...+.+...+...+..+|||||||+|..|..+++.
T Consensus 27 ~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~ 63 (299)
T 2h1r_A 27 NPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL 63 (299)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc
Confidence 4555555556666667789999999999999999876
No 257
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=97.84 E-value=5.9e-05 Score=60.30 Aligned_cols=67 Identities=13% Similarity=0.100 Sum_probs=44.5
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCC-CCc------------------------------c------CCCCceeEEEEcC
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPE-DGQ------------------------------S------ENEGSFDYAFVDA 60 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~-~~~------------------------------~------~~~~~fD~v~~d~ 60 (143)
.+..+|||+|||+|..++.+|+.... .+. . ...++||+|++|-
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dP 364 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDP 364 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECC
T ss_pred CCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEECC
Confidence 45689999999999999999986221 000 1 1125799999986
Q ss_pred CccchHHHHHHHHhcccCCeEEEEe
Q 032292 61 DKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 61 ~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
.-......++.+ ..++|++++.+.
T Consensus 365 Pr~g~~~~~~~l-~~~~p~~ivyvs 388 (433)
T 1uwv_A 365 ARAGAAGVMQQI-IKLEPIRIVYVS 388 (433)
T ss_dssp CTTCCHHHHHHH-HHHCCSEEEEEE
T ss_pred CCccHHHHHHHH-HhcCCCeEEEEE
Confidence 543333444444 347899988764
No 258
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.79 E-value=3.4e-05 Score=58.57 Aligned_cols=23 Identities=17% Similarity=0.164 Sum_probs=19.6
Q ss_pred HHHHHHHHhcccCCeEEEEeccC
Q 032292 66 CNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 66 ~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
...+..+.+.|+|||+|++....
T Consensus 180 ~~~l~~l~~~L~PGG~Lvls~~~ 202 (277)
T 3giw_A 180 VGIVRRLLEPLPSGSYLAMSIGT 202 (277)
T ss_dssp HHHHHHHHTTSCTTCEEEEEEEC
T ss_pred HHHHHHHHHhCCCCcEEEEEecc
Confidence 56889999999999999987654
No 259
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.74 E-value=1.6e-05 Score=55.36 Aligned_cols=71 Identities=13% Similarity=0.112 Sum_probs=46.8
Q ss_pred hcCCCEEEEEeccccH---HHHHH--Hh-hCCCCCc---------cC---CCCceeEEEEcCC---c-cchHHHHHHHHh
Q 032292 17 LVNAKKTIEIGVFTGY---SLLLT--AL-TIPEDGQ---------SE---NEGSFDYAFVDAD---K-DNYCNYHERLMK 74 (143)
Q Consensus 17 ~~~~~~vLeiG~g~G~---~t~~l--a~-~~~~~~~---------~~---~~~~fD~v~~d~~---~-~~~~~~~~~~~~ 74 (143)
..+..+|||+|||... +...+ |+ ..+.... +. .+++||+|++... . .+....++++.+
T Consensus 10 ~~~g~~vL~~~~g~v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~l~~~~r 89 (176)
T 2ld4_A 10 ISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEILAEIAR 89 (176)
T ss_dssp CCTTSEEEEEECTTSCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCCCCCCHHHHHHHHH
T ss_pred CCCCCEEEEecCCceeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChhhhcccCHHHHHHHHHH
Confidence 3467899999999753 11111 11 1221111 23 5678999998542 2 456789999999
Q ss_pred cccCCeEEEEecc
Q 032292 75 LLKVGGIAVYDNT 87 (143)
Q Consensus 75 ~L~~gG~li~d~~ 87 (143)
+|||||.+++.+.
T Consensus 90 ~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 90 ILRPGGCLFLKEP 102 (176)
T ss_dssp HEEEEEEEEEEEE
T ss_pred HCCCCEEEEEEcc
Confidence 9999999998543
No 260
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.63 E-value=6.6e-05 Score=58.76 Aligned_cols=22 Identities=18% Similarity=0.028 Sum_probs=19.8
Q ss_pred CCEEEEEeccccHHHHHHHhhC
Q 032292 20 AKKTIEIGVFTGYSLLLTALTI 41 (143)
Q Consensus 20 ~~~vLeiG~g~G~~t~~la~~~ 41 (143)
+.+|||+|||+|..++.+|+..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~ 235 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNF 235 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGS
T ss_pred CCEEEEccCCCCHHHHHHHhcC
Confidence 5789999999999999999864
No 261
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.60 E-value=5.4e-05 Score=57.44 Aligned_cols=68 Identities=12% Similarity=-0.025 Sum_probs=47.4
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCC----------C-----------Cc------------cCCCCceeEEEEcCCcc-
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPE----------D-----------GQ------------SENEGSFDYAFVDADKD- 63 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~----------~-----------~~------------~~~~~~fD~v~~d~~~~- 63 (143)
.+..+|||+|||+|.++...++..+. + +. ....+++|+|++|....
T Consensus 89 k~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDmApns 168 (282)
T 3gcz_A 89 KPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPGDTLLCDIGESS 168 (282)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCCSEEEECCCCCC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCCcCEEEecCccCC
Confidence 45679999999999999998863221 0 00 12357899999997542
Q ss_pred ------chH--HHHHHHHhcccCC--eEEEEe
Q 032292 64 ------NYC--NYHERLMKLLKVG--GIAVYD 85 (143)
Q Consensus 64 ------~~~--~~~~~~~~~L~~g--G~li~d 85 (143)
++. ..++.+.++|+|| |.+++-
T Consensus 169 G~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~K 200 (282)
T 3gcz_A 169 PSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIK 200 (282)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CChHHHHHHHHHHHHHHHHHcCCCCCCcEEEE
Confidence 111 2355667999999 999884
No 262
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=97.60 E-value=0.0001 Score=59.07 Aligned_cols=37 Identities=16% Similarity=-0.093 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhC
Q 032292 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTI 41 (143)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~ 41 (143)
+...++|..++...+..+|||.|||+|...+.+++.+
T Consensus 157 ~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l 193 (445)
T 2okc_A 157 RPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYM 193 (445)
T ss_dssp HHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHH
Confidence 3455666666655556799999999999988887653
No 263
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.59 E-value=0.00026 Score=55.96 Aligned_cols=106 Identities=17% Similarity=0.062 Sum_probs=66.4
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCCCCc----------------------------------------------cCCCCc
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------------------------------------SENEGS 52 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------------------------------------~~~~~~ 52 (143)
+|++||-||-|.|..+..+.+.-+.... ....++
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~ 284 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 284 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCc
Confidence 5799999999999999988764221000 012357
Q ss_pred eeEEEEcCCc----c--------c-hHHHHHHHHhcccCCeEEEEec-cCCCccccCCCCCCCCCcccchHHHHHHHHHH
Q 032292 53 FDYAFVDADK----D--------N-YCNYHERLMKLLKVGGIAVYDN-TLWGGTVAVPEEQVPDHFRGSSRQAILDLNRS 118 (143)
Q Consensus 53 fD~v~~d~~~----~--------~-~~~~~~~~~~~L~~gG~li~d~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~f~~~ 118 (143)
||+|++|... . - ..++++.+.+.|+|||+++... ..+ .....+.+.+.
T Consensus 285 yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~------------------~~~~~~~i~~t 346 (381)
T 3c6k_A 285 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVN------------------LTEALSLYEEQ 346 (381)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETT------------------CHHHHHHHHHH
T ss_pred eeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCc------------------chhHHHHHHHH
Confidence 9999999521 0 0 1356788899999999998752 111 11234555555
Q ss_pred hhcC-CCeeE----EEeec---CCeeEEEEEc
Q 032292 119 LADD-PRVQL----SHVAL---GDGITICRRI 142 (143)
Q Consensus 119 l~~~-~~~~~----~~lp~---~~Gl~~~~k~ 142 (143)
+..- +.+.. +.+|. .+|..++.|+
T Consensus 347 l~~vF~~v~~~~~~~~VPSy~~~W~F~~aSK~ 378 (381)
T 3c6k_A 347 LGRLYCPVEFSKEIVCVPSYLELWVFYTVWKK 378 (381)
T ss_dssp HTTSSSCEEEEEEEECCGGGSSCEEEEEEEEC
T ss_pred HHHhCCcceEeeEEEEecCCCCceeeeEEECC
Confidence 5532 33322 23353 5788888875
No 264
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.51 E-value=0.00021 Score=54.65 Aligned_cols=68 Identities=12% Similarity=0.045 Sum_probs=47.9
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCC----------C-----------Cc------------cCCCCceeEEEEcCCcc-
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPE----------D-----------GQ------------SENEGSFDYAFVDADKD- 63 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~----------~-----------~~------------~~~~~~fD~v~~d~~~~- 63 (143)
.+.++|||+||++|-++..+++..+. + +. ....+++|+|++|....
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~APns 159 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIGESS 159 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCCC
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcCEEeecCcCCC
Confidence 35689999999999999999974210 0 00 12356899999997542
Q ss_pred ------ch--HHHHHHHHhcccCC-eEEEEe
Q 032292 64 ------NY--CNYHERLMKLLKVG-GIAVYD 85 (143)
Q Consensus 64 ------~~--~~~~~~~~~~L~~g-G~li~d 85 (143)
++ ...++.+.++|+|| |.+++-
T Consensus 160 G~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 160 SNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 11 12356667999999 999985
No 265
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=97.46 E-value=9.1e-05 Score=61.18 Aligned_cols=23 Identities=17% Similarity=0.239 Sum_probs=21.1
Q ss_pred cCCCEEEEEeccccHHHHHHHhh
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALT 40 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~ 40 (143)
.+|.+|||||||.|..+.+||+.
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~ 87 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK 87 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT
T ss_pred CCCCeEEEECCCCcHHHHHHHhC
Confidence 46889999999999999999986
No 266
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.35 E-value=0.00013 Score=54.49 Aligned_cols=39 Identities=13% Similarity=-0.055 Sum_probs=30.6
Q ss_pred cChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhC
Q 032292 3 LLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTI 41 (143)
Q Consensus 3 ~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~ 41 (143)
+++...+-+...+...+..+|||||||+|..|..+++..
T Consensus 13 ~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~ 51 (255)
T 3tqs_A 13 HDSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTEC 51 (255)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTS
T ss_pred cCHHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhC
Confidence 345555666666666678899999999999999999864
No 267
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.30 E-value=0.00026 Score=55.89 Aligned_cols=18 Identities=11% Similarity=0.278 Sum_probs=16.3
Q ss_pred CCEEEEEeccccHHHHHH
Q 032292 20 AKKTIEIGVFTGYSLLLT 37 (143)
Q Consensus 20 ~~~vLeiG~g~G~~t~~l 37 (143)
+-+|+|+||++|..|+.+
T Consensus 53 ~~~IaDlGCssG~Nt~~~ 70 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHI 70 (374)
T ss_dssp CEEEEEETCCSSHHHHHH
T ss_pred ceEEEecCCCCChhHHHH
Confidence 478999999999999987
No 268
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.26 E-value=0.00024 Score=53.84 Aligned_cols=39 Identities=13% Similarity=-0.026 Sum_probs=30.1
Q ss_pred ChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCC
Q 032292 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIP 42 (143)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~ 42 (143)
++...+-+...+...+..+|||||||+|..|..+++...
T Consensus 27 d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~ 65 (279)
T 3uzu_A 27 DHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLA 65 (279)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHC
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCC
Confidence 444555555555666788999999999999999998754
No 269
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=97.20 E-value=0.00023 Score=52.58 Aligned_cols=37 Identities=19% Similarity=0.076 Sum_probs=26.8
Q ss_pred hHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhC
Q 032292 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTI 41 (143)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~ 41 (143)
+...+.+...+...+..+|||||||+|..|..+++..
T Consensus 16 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~ 52 (244)
T 1qam_A 16 KHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC 52 (244)
T ss_dssp HHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS
T ss_pred HHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC
Confidence 3334444444444567899999999999999999874
No 270
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.17 E-value=0.00031 Score=52.20 Aligned_cols=36 Identities=17% Similarity=0.035 Sum_probs=27.6
Q ss_pred hHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhh
Q 032292 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALT 40 (143)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~ 40 (143)
+...+-+...+...+..+|||||||+|..|..+++.
T Consensus 17 ~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~ 52 (249)
T 3ftd_A 17 EGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH 52 (249)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc
Confidence 444444555555556789999999999999999876
No 271
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.15 E-value=0.0039 Score=53.74 Aligned_cols=39 Identities=8% Similarity=0.050 Sum_probs=29.0
Q ss_pred ChHHHHHHHHHHhh------cCCCEEEEEeccccHHHHHHHhhCC
Q 032292 4 LTIHGQLMAMLLRL------VNAKKTIEIGVFTGYSLLLTALTIP 42 (143)
Q Consensus 4 ~~~~~~~l~~l~~~------~~~~~vLeiG~g~G~~t~~la~~~~ 42 (143)
+++.+.+|..++.. ....+|||.|||+|...+.+++.++
T Consensus 300 P~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ 344 (878)
T 3s1s_A 300 DIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFN 344 (878)
T ss_dssp CHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTST
T ss_pred CHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhc
Confidence 45667777777321 1357999999999999999887764
No 272
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.13 E-value=0.00043 Score=52.22 Aligned_cols=37 Identities=14% Similarity=-0.057 Sum_probs=27.9
Q ss_pred ChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhC
Q 032292 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTI 41 (143)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~ 41 (143)
++...+-+...+...+. +|||||||+|..|..+++..
T Consensus 32 d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~ 68 (271)
T 3fut_A 32 SEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAG 68 (271)
T ss_dssp CHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT
T ss_pred CHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC
Confidence 34445555555555566 99999999999999999874
No 273
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.07 E-value=0.00033 Score=52.60 Aligned_cols=68 Identities=15% Similarity=0.057 Sum_probs=46.8
Q ss_pred cCCCEEEEEeccccHHHHHHHhh--CC--------------CC-----Cc------------cCCCCceeEEEEcCCcc-
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALT--IP--------------ED-----GQ------------SENEGSFDYAFVDADKD- 63 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~--~~--------------~~-----~~------------~~~~~~fD~v~~d~~~~- 63 (143)
.+..+|||+||+.|-|+.+.++. +. +- +. .....++|+|++|....
T Consensus 72 kpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~Df~~~~~~~~DvVLSDMAPnS 151 (269)
T 2px2_A 72 QPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDVFYKPSEISDTLLCDIGESS 151 (269)
T ss_dssp CCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCGGGSCCCCCSEEEECCCCCC
T ss_pred CCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccCCCceEEEeeccCCccCCCCCCCCEEEeCCCCCC
Confidence 45679999999999999999887 21 10 10 01123799999997431
Q ss_pred -----ch---HHHHHHHHhcccCCe-EEEEe
Q 032292 64 -----NY---CNYHERLMKLLKVGG-IAVYD 85 (143)
Q Consensus 64 -----~~---~~~~~~~~~~L~~gG-~li~d 85 (143)
+. ..+++.+.++|+||| .+++-
T Consensus 152 G~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvK 182 (269)
T 2px2_A 152 PSAEIEEQRTLRILEMVSDWLSRGPKEFCIK 182 (269)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CccHHHHHHHHHHHHHHHHHhhcCCcEEEEE
Confidence 11 125667779999999 88773
No 274
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=96.96 E-value=0.00094 Score=54.94 Aligned_cols=36 Identities=11% Similarity=-0.093 Sum_probs=26.6
Q ss_pred HHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhC
Q 032292 6 IHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTI 41 (143)
Q Consensus 6 ~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~ 41 (143)
...++|..++...+..+|+|.+||+|...+.+++.+
T Consensus 156 ~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l 191 (541)
T 2ar0_A 156 PLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYV 191 (541)
T ss_dssp HHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHH
Confidence 445666666655556799999999999888776543
No 275
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=96.96 E-value=0.00053 Score=51.08 Aligned_cols=35 Identities=9% Similarity=-0.118 Sum_probs=26.2
Q ss_pred ChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHh
Q 032292 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTAL 39 (143)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~ 39 (143)
++...+.+...+...+..+|||||||+|+.|. +++
T Consensus 6 d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~ 40 (252)
T 1qyr_A 6 DQFVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG 40 (252)
T ss_dssp CHHHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH
T ss_pred CHHHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh
Confidence 44555555555566667899999999999999 765
No 276
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=96.96 E-value=0.00058 Score=57.32 Aligned_cols=36 Identities=14% Similarity=0.161 Sum_probs=25.6
Q ss_pred CCCCceeEEEEcC-----CccchHHHHHHHHhcccCCeEEE
Q 032292 48 ENEGSFDYAFVDA-----DKDNYCNYHERLMKLLKVGGIAV 83 (143)
Q Consensus 48 ~~~~~fD~v~~d~-----~~~~~~~~~~~~~~~L~~gG~li 83 (143)
..+++.|+|++.- ..+..++.+....++|||||+++
T Consensus 424 ~LPEKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 424 VAPEKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCSSCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred cCCcccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 3468999998742 12334566666679999999986
No 277
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=96.95 E-value=0.0062 Score=50.15 Aligned_cols=39 Identities=15% Similarity=-0.003 Sum_probs=30.1
Q ss_pred ChHHHHHHHHHHhh----cCCCEEEEEeccccHHHHHHHhhCC
Q 032292 4 LTIHGQLMAMLLRL----VNAKKTIEIGVFTGYSLLLTALTIP 42 (143)
Q Consensus 4 ~~~~~~~l~~l~~~----~~~~~vLeiG~g~G~~t~~la~~~~ 42 (143)
++...++|..++.. ....+|+|.+||+|...+.+++.+.
T Consensus 202 P~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~ 244 (542)
T 3lkd_A 202 PQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSR 244 (542)
T ss_dssp CHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCS
T ss_pred cHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHH
Confidence 45667788887763 3567999999999998888877764
No 278
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=96.94 E-value=0.0023 Score=52.67 Aligned_cols=35 Identities=9% Similarity=-0.012 Sum_probs=25.6
Q ss_pred ChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHh
Q 032292 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTAL 39 (143)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~ 39 (143)
++...++|..++... +.+|+|.+||+|...+.+++
T Consensus 230 P~~Vv~lmv~ll~p~-~~~VlDPaCGSG~fLi~a~~ 264 (544)
T 3khk_A 230 PKSIVTLIVEMLEPY-KGRVYDPAMGSGGFFVSSDK 264 (544)
T ss_dssp CHHHHHHHHHHHCCC-SEEEEESSCTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHhcC-CCeEeCcccCcCcHHHHHHH
Confidence 445667777777543 35999999999988777654
No 279
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.88 E-value=0.0032 Score=48.37 Aligned_cols=35 Identities=20% Similarity=0.168 Sum_probs=27.1
Q ss_pred CCceeEEEEcCCcc--c---h-HHHHHHHHhcccCCeEEEE
Q 032292 50 EGSFDYAFVDADKD--N---Y-CNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 50 ~~~fD~v~~d~~~~--~---~-~~~~~~~~~~L~~gG~li~ 84 (143)
..+||++|.|+-.. + | .+.|+.+.++++|||+++-
T Consensus 184 ~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laT 224 (308)
T 3vyw_A 184 NFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVS 224 (308)
T ss_dssp SCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEE
T ss_pred ccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEE
Confidence 34799999998321 1 1 4689999999999999974
No 280
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.76 E-value=0.0024 Score=50.47 Aligned_cols=21 Identities=19% Similarity=0.170 Sum_probs=18.3
Q ss_pred CCEEEEEeccccHHHHHHHhh
Q 032292 20 AKKTIEIGVFTGYSLLLTALT 40 (143)
Q Consensus 20 ~~~vLeiG~g~G~~t~~la~~ 40 (143)
+-+|+|+||++|..|+.+...
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ 73 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRD 73 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHH
T ss_pred ceEEEecCCCCCchHHHHHHH
Confidence 578999999999999987765
No 281
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=96.73 E-value=0.00029 Score=51.84 Aligned_cols=37 Identities=19% Similarity=0.007 Sum_probs=27.4
Q ss_pred hHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhC
Q 032292 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTI 41 (143)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~ 41 (143)
+...+.+...+...+..+|||||||+|..+..+++..
T Consensus 15 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~ 51 (245)
T 1yub_A 15 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS 51 (245)
T ss_dssp TTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS
T ss_pred HHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC
Confidence 3334444445555567899999999999999999874
No 282
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=96.72 E-value=0.0078 Score=41.52 Aligned_cols=33 Identities=15% Similarity=0.146 Sum_probs=25.4
Q ss_pred CCCEEEEEecccc-HHHHHHHhhCCCCCccCCCCceeEEEEcCC
Q 032292 19 NAKKTIEIGVFTG-YSLLLTALTIPEDGQSENEGSFDYAFVDAD 61 (143)
Q Consensus 19 ~~~~vLeiG~g~G-~~t~~la~~~~~~~~~~~~~~fD~v~~d~~ 61 (143)
.+.+|||||||.| ..+.+|++... ||++-+|..
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~~g----------~~V~atDIn 68 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKHSK----------VDLVLTDIK 68 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHHSC----------CEEEEECSS
T ss_pred CCCcEEEEccCCChHHHHHHHHhCC----------CeEEEEECC
Confidence 4679999999999 59999987533 566666654
No 283
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=96.64 E-value=0.0055 Score=48.43 Aligned_cols=36 Identities=11% Similarity=0.009 Sum_probs=26.4
Q ss_pred hHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhh
Q 032292 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALT 40 (143)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~ 40 (143)
+.-+..|..++...+...+||.+||+|..++..|..
T Consensus 187 e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~ 222 (393)
T 3k0b_A 187 ETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALI 222 (393)
T ss_dssp HHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHH
Confidence 344444555555566789999999999998887754
No 284
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.59 E-value=0.0036 Score=47.92 Aligned_cols=67 Identities=15% Similarity=0.044 Sum_probs=47.0
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCC---------C-c-----------------------cCCCCceeEEEEcCCccc
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPED---------G-Q-----------------------SENEGSFDYAFVDADKDN 64 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~---------~-~-----------------------~~~~~~fD~v~~d~~~~~ 64 (143)
.+..+|||+||++|-++.+.+...+.. + . .....++|+|++|.....
T Consensus 93 ~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~~~~D~ivcDigeSs 172 (321)
T 3lkz_A 93 EPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPSECCDTLLCDIGESS 172 (321)
T ss_dssp CCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCCCCCSEEEECCCCCC
T ss_pred CCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCCCCCCEEEEECccCC
Confidence 356799999999999999877664321 1 0 122477999999975421
Q ss_pred ---------hHHHHHHHHhcccCC-eEEEE
Q 032292 65 ---------YCNYHERLMKLLKVG-GIAVY 84 (143)
Q Consensus 65 ---------~~~~~~~~~~~L~~g-G~li~ 84 (143)
-...++.+.++|++| |-+++
T Consensus 173 ~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~ 202 (321)
T 3lkz_A 173 SSAEVEEHRTIRVLEMVEDWLHRGPREFCV 202 (321)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CChhhhhhHHHHHHHHHHHHhccCCCcEEE
Confidence 123677778999998 77776
No 285
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=96.58 E-value=0.0067 Score=47.81 Aligned_cols=35 Identities=11% Similarity=0.043 Sum_probs=26.0
Q ss_pred HHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhh
Q 032292 6 IHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALT 40 (143)
Q Consensus 6 ~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~ 40 (143)
.-+..|-.++...+...+||.+||+|..++..|..
T Consensus 181 ~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~ 215 (384)
T 3ldg_A 181 NMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMI 215 (384)
T ss_dssp HHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHH
Confidence 34444555555566789999999999998887754
No 286
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=96.54 E-value=0.0041 Score=47.53 Aligned_cols=26 Identities=15% Similarity=-0.018 Sum_probs=23.1
Q ss_pred hcCCCEEEEEeccccHHHHHHHhhCC
Q 032292 17 LVNAKKTIEIGVFTGYSLLLTALTIP 42 (143)
Q Consensus 17 ~~~~~~vLeiG~g~G~~t~~la~~~~ 42 (143)
..+..+|||+|||+|..+..+++.++
T Consensus 24 ~~~g~~vLD~g~G~G~~s~~la~~~~ 49 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGGHSRAILEHCP 49 (301)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCT
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHCC
Confidence 44678999999999999999999876
No 287
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=96.52 E-value=0.0053 Score=48.32 Aligned_cols=33 Identities=12% Similarity=0.054 Sum_probs=24.4
Q ss_pred HHHHHHHHhhcCCCEEEEEeccccHHHHHHHhh
Q 032292 8 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALT 40 (143)
Q Consensus 8 ~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~ 40 (143)
+..|..++...+...|||.+||+|..++.+|..
T Consensus 184 Aa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~ 216 (385)
T 3ldu_A 184 AAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMI 216 (385)
T ss_dssp HHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHH
T ss_pred HHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHH
Confidence 344444444556789999999999999988765
No 288
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.47 E-value=0.005 Score=48.22 Aligned_cols=34 Identities=18% Similarity=0.045 Sum_probs=26.7
Q ss_pred HHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCC
Q 032292 9 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIP 42 (143)
Q Consensus 9 ~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~ 42 (143)
.+...++...+..+|||+.++.|.=|..||....
T Consensus 138 ~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~ 171 (359)
T 4fzv_A 138 LLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGC 171 (359)
T ss_dssp HHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTC
T ss_pred HHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcC
Confidence 4455555666778999999999999999987654
No 289
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.22 E-value=0.011 Score=43.93 Aligned_cols=66 Identities=14% Similarity=0.035 Sum_probs=45.9
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCC----------Cc-----------------------cCCCCceeEEEEcCCccc
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPED----------GQ-----------------------SENEGSFDYAFVDADKDN 64 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~----------~~-----------------------~~~~~~fD~v~~d~~~~~ 64 (143)
.+..+|||+||++|-++.+.+...+.. +. .....++|.|++|.....
T Consensus 77 ~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~~~~DtllcDIgeSs 156 (267)
T 3p8z_A 77 IPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPPEKCDTLLCDIGESS 156 (267)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCCCCCSEEEECCCCCC
T ss_pred CCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecCCccccEEEEecCCCC
Confidence 456799999999999999887764321 00 123477999999975421
Q ss_pred ---------hHHHHHHHHhcccCCeEEEE
Q 032292 65 ---------YCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 65 ---------~~~~~~~~~~~L~~gG~li~ 84 (143)
-...++.+.++|++ |-+++
T Consensus 157 ~~~~vE~~RtlrvLela~~wL~~-~~fc~ 184 (267)
T 3p8z_A 157 PSPTVEESRTIRVLKMVEPWLKN-NQFCI 184 (267)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCSS-CEEEE
T ss_pred CChhhhhhHHHHHHHHHHHhccc-CCEEE
Confidence 12367777899998 55555
No 290
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=96.13 E-value=0.0012 Score=55.97 Aligned_cols=34 Identities=15% Similarity=0.094 Sum_probs=24.9
Q ss_pred CCceeEEEEcC-----CccchHHHHHHHHhcccCCeEEE
Q 032292 50 EGSFDYAFVDA-----DKDNYCNYHERLMKLLKVGGIAV 83 (143)
Q Consensus 50 ~~~fD~v~~d~-----~~~~~~~~~~~~~~~L~~gG~li 83 (143)
.++.|+|++.- ..+-.++.++.+.++|+|||+++
T Consensus 493 ~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 493 FEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp CCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred CCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 57899998752 12234567777779999999986
No 291
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=96.08 E-value=0.015 Score=45.82 Aligned_cols=61 Identities=13% Similarity=0.125 Sum_probs=40.4
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCC----C-Cc---------------------cCCCCceeEEEEcCCccchHHHHHH
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPE----D-GQ---------------------SENEGSFDYAFVDADKDNYCNYHER 71 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~----~-~~---------------------~~~~~~fD~v~~d~~~~~~~~~~~~ 71 (143)
.+..++||+||++|.+|..+++.-.. + +. ....++||+|++|... +.......
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~-~p~~~~~l 288 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVE-KPAKVAAL 288 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEEEECCSS-CHHHHHHH
T ss_pred CCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhhcChhhccCCCeEEEeCccccccCCCCCcCEEEEcCCC-ChHHhHHH
Confidence 46789999999999999999876321 0 00 1234689999999754 34444444
Q ss_pred HHhcccCC
Q 032292 72 LMKLLKVG 79 (143)
Q Consensus 72 ~~~~L~~g 79 (143)
+.++|..+
T Consensus 289 ~~~wl~~~ 296 (375)
T 4auk_A 289 MAQWLVNG 296 (375)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhcc
Confidence 44544444
No 292
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.06 E-value=0.017 Score=47.34 Aligned_cols=37 Identities=11% Similarity=-0.056 Sum_probs=29.1
Q ss_pred ChHHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhh
Q 032292 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALT 40 (143)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~ 40 (143)
++...++|..++......+|+|-.||+|...+...+.
T Consensus 202 P~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~ 238 (530)
T 3ufb_A 202 PRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEH 238 (530)
T ss_dssp CHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHH
T ss_pred cHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHH
Confidence 4566788888887777789999999999887765544
No 293
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=95.93 E-value=0.0026 Score=49.85 Aligned_cols=21 Identities=14% Similarity=0.237 Sum_probs=16.8
Q ss_pred CCEEEEEeccccHHHHHHHhh
Q 032292 20 AKKTIEIGVFTGYSLLLTALT 40 (143)
Q Consensus 20 ~~~vLeiG~g~G~~t~~la~~ 40 (143)
+-+|+|+||++|..|+.+...
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ 72 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTE 72 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGT
T ss_pred ceEEEecCCCCCcchHHHHHH
Confidence 457899999999888876544
No 294
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=95.81 E-value=0.0032 Score=46.96 Aligned_cols=33 Identities=15% Similarity=0.108 Sum_probs=25.3
Q ss_pred HHHHHHHHhhcCCCEEEEEeccccHHHHHHHhh
Q 032292 8 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALT 40 (143)
Q Consensus 8 ~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~ 40 (143)
..++...+...+..+|||+|||+|..++.+|+.
T Consensus 72 ~~~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~ 104 (258)
T 2r6z_A 72 GELIAKAVNHTAHPTVWDATAGLGRDSFVLASL 104 (258)
T ss_dssp -CHHHHHTTGGGCCCEEETTCTTCHHHHHHHHT
T ss_pred hHHHHHHhCcCCcCeEEEeeCccCHHHHHHHHh
Confidence 344555555455689999999999999999986
No 295
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.74 E-value=0.017 Score=48.40 Aligned_cols=35 Identities=14% Similarity=0.183 Sum_probs=27.6
Q ss_pred CCceeEEEEcCCccch------HHHHHHHHhcccCCeEEEE
Q 032292 50 EGSFDYAFVDADKDNY------CNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 50 ~~~fD~v~~d~~~~~~------~~~~~~~~~~L~~gG~li~ 84 (143)
...+|.+|+|+-...+ .+.|..+.+++++||.+..
T Consensus 169 ~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 209 (689)
T 3pvc_A 169 NNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFST 209 (689)
T ss_dssp TTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEE
T ss_pred CCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 3679999999865433 5788999999999999875
No 296
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=95.61 E-value=0.028 Score=43.20 Aligned_cols=65 Identities=14% Similarity=0.234 Sum_probs=42.6
Q ss_pred CCCEEEEEec------cccHHHHHHHhhCCCCCc-----------------------cCCCCceeEEEEcCCc-------
Q 032292 19 NAKKTIEIGV------FTGYSLLLTALTIPEDGQ-----------------------SENEGSFDYAFVDADK------- 62 (143)
Q Consensus 19 ~~~~vLeiG~------g~G~~t~~la~~~~~~~~-----------------------~~~~~~fD~v~~d~~~------- 62 (143)
...+|||+|+ ..|.+ .+.+..+.++. ....++||+|++|...
T Consensus 109 ~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~sda~~~IqGD~~~~~~~~k~DLVISDMAPNtTG~~D 186 (344)
T 3r24_A 109 YNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATVHTANKWDLIISDMYDPRTKHVT 186 (344)
T ss_dssp TTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBCSSSEEEESCGGGEEESSCEEEEEECCCCTTSCSSC
T ss_pred CCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccccCCCeEEEccccccccCCCCCEEEecCCCCcCCccc
Confidence 4589999995 77773 33444453223 1123789999998531
Q ss_pred -c----c--hHHHHHHHHhcccCCeEEEEe
Q 032292 63 -D----N--YCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 63 -~----~--~~~~~~~~~~~L~~gG~li~d 85 (143)
. . ...+++-+.++|+|||.+++-
T Consensus 187 ~d~~Rs~~L~ElALdfA~~~LkpGGsFvVK 216 (344)
T 3r24_A 187 KENDSKEGFFTYLCGFIKQKLALGGSIAVK 216 (344)
T ss_dssp SCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cchhHHHHHHHHHHHHHHHhCcCCCEEEEE
Confidence 1 1 123566677999999999985
No 297
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=95.20 E-value=0.045 Score=46.37 Aligned_cols=35 Identities=11% Similarity=0.008 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhhcCCCEEEEEeccccHHHHHHHhh
Q 032292 6 IHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALT 40 (143)
Q Consensus 6 ~~~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~ 40 (143)
.-+..|..++...+...+||.+||+|..++..|..
T Consensus 177 ~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~ 211 (703)
T 3v97_A 177 TLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAML 211 (703)
T ss_dssp HHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHH
Confidence 34444555555556789999999999998887754
No 298
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=94.55 E-value=0.013 Score=43.70 Aligned_cols=32 Identities=9% Similarity=0.088 Sum_probs=25.3
Q ss_pred HHHHHHHhhcCC--CEEEEEeccccHHHHHHHhh
Q 032292 9 QLMAMLLRLVNA--KKTIEIGVFTGYSLLLTALT 40 (143)
Q Consensus 9 ~~l~~l~~~~~~--~~vLeiG~g~G~~t~~la~~ 40 (143)
+.+...+...++ .+|||+|||+|..++++|+.
T Consensus 76 e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~ 109 (258)
T 2oyr_A 76 EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV 109 (258)
T ss_dssp SHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH
T ss_pred HHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc
Confidence 444455555566 89999999999999999986
No 299
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=93.24 E-value=0.044 Score=43.61 Aligned_cols=21 Identities=10% Similarity=0.121 Sum_probs=19.5
Q ss_pred CCEEEEEeccccHHHHHHHhh
Q 032292 20 AKKTIEIGVFTGYSLLLTALT 40 (143)
Q Consensus 20 ~~~vLeiG~g~G~~t~~la~~ 40 (143)
..+|||+|||+|..++.+|+.
T Consensus 94 g~~VLDLgcG~G~~al~LA~~ 114 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK 114 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT
T ss_pred CCEEEEeCCCchHHHHHHHhc
Confidence 689999999999999999876
No 300
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=92.59 E-value=0.51 Score=35.33 Aligned_cols=66 Identities=18% Similarity=0.038 Sum_probs=38.4
Q ss_pred HHHHHHhh--cCCCEEEEEeccccHHHHHHHhhCCCCCccCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 032292 10 LMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPEDGQSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 10 ~l~~l~~~--~~~~~vLeiG~g~G~~t~~la~~~~~~~~~~~~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
++..++.. .+...|||++||+|..++.+++. . ..++-+|.+......+-+.+........+.++++
T Consensus 224 l~~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~-g----------~~~~g~e~~~~~~~~a~~r~~~~~~~~~~~~~~~ 291 (297)
T 2zig_A 224 LAERLVRMFSFVGDVVLDPFAGTGTTLIAAARW-G----------RRALGVELVPRYAQLAKERFAREVPGFSLEVLDG 291 (297)
T ss_dssp HHHHHHHHHCCTTCEEEETTCTTTHHHHHHHHT-T----------CEEEEEESCHHHHHHHHHHHHHHSTTCCEEEECC
T ss_pred HHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc-C----------CeEEEEeCCHHHHHHHHHHHHHhccccchhhCCc
Confidence 44444433 35689999999999999987653 2 2577777764333333334434333334444443
No 301
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=92.58 E-value=0.086 Score=50.47 Aligned_cols=68 Identities=15% Similarity=0.108 Sum_probs=32.1
Q ss_pred CCEEEEEeccccHHHHHHHhhCCCCC-------------------c---------c------C----CCCceeEEEEcCC
Q 032292 20 AKKTIEIGVFTGYSLLLTALTIPEDG-------------------Q---------S------E----NEGSFDYAFVDAD 61 (143)
Q Consensus 20 ~~~vLeiG~g~G~~t~~la~~~~~~~-------------------~---------~------~----~~~~fD~v~~d~~ 61 (143)
..+|||||.|+|..+..+.+.+.... + . . ....||+|+....
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~v 1320 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNCA 1320 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEECC
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEccc
Confidence 46999999999987766655543200 0 0 0 2346899987543
Q ss_pred c---cchHHHHHHHHhcccCCeEEEEecc
Q 032292 62 K---DNYCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 62 ~---~~~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
. .+....+..+.++|+|||.+++...
T Consensus 1321 l~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1321 LATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp --------------------CCEEEEEEC
T ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 2 2345567888899999999988654
No 302
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=92.29 E-value=0.18 Score=38.82 Aligned_cols=67 Identities=18% Similarity=0.161 Sum_probs=46.1
Q ss_pred hhcCCCEEEEEeccc-cHHHHHHHhhCCCCCc-----------------------c-----------CCCCceeEEEEcC
Q 032292 16 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQ-----------------------S-----------ENEGSFDYAFVDA 60 (143)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~t~~la~~~~~~~~-----------------------~-----------~~~~~fD~v~~d~ 60 (143)
...+.++||.+|+|. |..++.+|+..+.... . ...+.+|+||-..
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~ 266 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALEST 266 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECC
Confidence 345678999999986 8888888887653100 0 0112689988543
Q ss_pred CccchHHHHHHHHhcccCCeEEEEe
Q 032292 61 DKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 61 ~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
.. ...++.+.+.|+++|.++.-
T Consensus 267 g~---~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 267 GS---PEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp CC---HHHHHHHHHTEEEEEEEEEC
T ss_pred CC---HHHHHHHHHHHhcCCEEEEe
Confidence 32 34577889999999999863
No 303
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=92.22 E-value=1.3 Score=30.82 Aligned_cols=80 Identities=11% Similarity=0.108 Sum_probs=51.9
Q ss_pred HHHHHHhhc--CCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------------c----CCCCcee
Q 032292 10 LMAMLLRLV--NAKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------------S----ENEGSFD 54 (143)
Q Consensus 10 ~l~~l~~~~--~~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------------~----~~~~~fD 54 (143)
.|...+... -+.-|||+|-|.|-.=-.|.+.+|+.-. + ....+.-
T Consensus 29 ~L~~a~~~v~~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp~~~P~~e~~ilGdi~~tL~~~~~r~g~~a~ 108 (174)
T 3iht_A 29 CLEHAIAQTAGLSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHPDSTPPEAQLILGDIRETLPATLERFGATAS 108 (174)
T ss_dssp HHHHHHHHTTTCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCGGGCCCGGGEEESCHHHHHHHHHHHHCSCEE
T ss_pred HHHHHHHHhcCCCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCCCCCCchHheecccHHHHHHHHHHhcCCceE
Confidence 344444433 3578999999999999999999885211 1 1134556
Q ss_pred EEEEcCCccchH------H-HHHHHHhcccCCeEEEEeccCC
Q 032292 55 YAFVDADKDNYC------N-YHERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 55 ~v~~d~~~~~~~------~-~~~~~~~~L~~gG~li~d~~~~ 89 (143)
++..|-...+-. . .-..+.++|+|||+++.+.-++
T Consensus 109 LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~pl~ 150 (174)
T 3iht_A 109 LVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSSDRMY 150 (174)
T ss_dssp EEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESSCCC
T ss_pred EEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCCccC
Confidence 667765433221 1 2234569999999999987664
No 304
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=92.14 E-value=0.57 Score=36.09 Aligned_cols=69 Identities=17% Similarity=0.079 Sum_probs=48.0
Q ss_pred HHhhcCCCEEEEEeccc-cHHHHHHHhhCCCCCc----------------------------------c---CCCCceeE
Q 032292 14 LLRLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQ----------------------------------S---ENEGSFDY 55 (143)
Q Consensus 14 l~~~~~~~~vLeiG~g~-G~~t~~la~~~~~~~~----------------------------------~---~~~~~fD~ 55 (143)
.+...+.++||-+|+|. |..++.+|+..+..-. . ...+.+|+
T Consensus 177 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dv 256 (370)
T 4ej6_A 177 LSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDV 256 (370)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCE
Confidence 34556788999999875 7888888888764100 0 12347999
Q ss_pred EEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 032292 56 AFVDADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 56 v~~d~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
||-.... ...++.+.+.|++||.++.-
T Consensus 257 vid~~G~---~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 257 VIECAGV---AETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp EEECSCC---HHHHHHHHHHEEEEEEEEEC
T ss_pred EEECCCC---HHHHHHHHHHhccCCEEEEE
Confidence 8854321 34677889999999999864
No 305
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=92.10 E-value=0.51 Score=35.95 Aligned_cols=70 Identities=14% Similarity=0.123 Sum_probs=47.3
Q ss_pred HHhhcCCCEEEEEeccc-cHHHHHHHhhCCCCCc----------------------------------c-CCCCceeEEE
Q 032292 14 LLRLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQ----------------------------------S-ENEGSFDYAF 57 (143)
Q Consensus 14 l~~~~~~~~vLeiG~g~-G~~t~~la~~~~~~~~----------------------------------~-~~~~~fD~v~ 57 (143)
.+...+.++||-+|+|. |..++.+|+..+..-. . .....+|+||
T Consensus 161 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~ 240 (352)
T 3fpc_A 161 LANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVV 240 (352)
T ss_dssp HTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEE
Confidence 34456778999999876 7888888888753111 0 1123699998
Q ss_pred EcCCccchHHHHHHHHhcccCCeEEEEec
Q 032292 58 VDADKDNYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 58 ~d~~~~~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
-.... ...++.+++.|++||.++.-.
T Consensus 241 d~~g~---~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 241 IAGGD---VHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp ECSSC---TTHHHHHHHHEEEEEEEEECC
T ss_pred ECCCC---hHHHHHHHHHHhcCCEEEEec
Confidence 44332 235678889999999998643
No 306
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=91.63 E-value=0.24 Score=38.59 Aligned_cols=38 Identities=11% Similarity=-0.096 Sum_probs=26.5
Q ss_pred ChHHHHHHHHHHhhcC------CCEEEEEeccccHHHHHHHhhC
Q 032292 4 LTIHGQLMAMLLRLVN------AKKTIEIGVFTGYSLLLTALTI 41 (143)
Q Consensus 4 ~~~~~~~l~~l~~~~~------~~~vLeiG~g~G~~t~~la~~~ 41 (143)
++...+=+...+...+ ...|||||.|.|..|..|++..
T Consensus 37 d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~ 80 (353)
T 1i4w_A 37 NPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKY 80 (353)
T ss_dssp CHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhC
Confidence 3444444444444432 4789999999999999999763
No 307
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=91.32 E-value=0.19 Score=34.92 Aligned_cols=64 Identities=14% Similarity=0.077 Sum_probs=42.5
Q ss_pred hcCCCEEEEEec--cccHHHHHHHhhCCCCCc---------------------------------c-CCCCceeEEEEcC
Q 032292 17 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQ---------------------------------S-ENEGSFDYAFVDA 60 (143)
Q Consensus 17 ~~~~~~vLeiG~--g~G~~t~~la~~~~~~~~---------------------------------~-~~~~~fD~v~~d~ 60 (143)
..+.++||.+|+ |.|..++.+++..+..-. . ...+.+|.++-.+
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~ 115 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSL 115 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECC
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECC
Confidence 446789999994 667777777665432100 0 1123589988655
Q ss_pred CccchHHHHHHHHhcccCCeEEEE
Q 032292 61 DKDNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 61 ~~~~~~~~~~~~~~~L~~gG~li~ 84 (143)
. ...++.+.+.|++||.++.
T Consensus 116 g----~~~~~~~~~~l~~~G~~v~ 135 (198)
T 1pqw_A 116 A----GEAIQRGVQILAPGGRFIE 135 (198)
T ss_dssp C----THHHHHHHHTEEEEEEEEE
T ss_pred c----hHHHHHHHHHhccCCEEEE
Confidence 3 2457788899999999986
No 308
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=91.13 E-value=0.42 Score=39.84 Aligned_cols=36 Identities=19% Similarity=0.214 Sum_probs=27.3
Q ss_pred CCceeEEEEcCCcc----c--hHHHHHHHHhcccCCeEEEEe
Q 032292 50 EGSFDYAFVDADKD----N--YCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 50 ~~~fD~v~~d~~~~----~--~~~~~~~~~~~L~~gG~li~d 85 (143)
...||.+|.|+-.. + -.+.|..+.+++++||.+...
T Consensus 177 ~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~ 218 (676)
T 3ps9_A 177 NQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATF 218 (676)
T ss_dssp TTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEES
T ss_pred CCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 36799999998421 1 146788999999999998753
No 309
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=90.61 E-value=2 Score=32.70 Aligned_cols=67 Identities=13% Similarity=0.031 Sum_probs=45.5
Q ss_pred hhcCCCEEEEEeccc-cHHHHHHHhhCCCCCc----------------------cCC---------------CCceeEEE
Q 032292 16 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQ----------------------SEN---------------EGSFDYAF 57 (143)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~t~~la~~~~~~~~----------------------~~~---------------~~~fD~v~ 57 (143)
...+.++||-+|+|. |..++.+|+..+.... ... .+.+|+||
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vi 247 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTI 247 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEE
Confidence 445678999999875 8888889988753100 001 02488887
Q ss_pred EcCCccchHHHHHHHHhcccCCeEEEEe
Q 032292 58 VDADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 58 ~d~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
-.... ...++.+++.|++||.++.-
T Consensus 248 d~~g~---~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 248 ECTGA---EASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp ECSCC---HHHHHHHHHHSCTTCEEEEC
T ss_pred ECCCC---hHHHHHHHHHhcCCCEEEEE
Confidence 54332 34567888999999999863
No 310
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=89.72 E-value=0.97 Score=35.07 Aligned_cols=70 Identities=10% Similarity=0.022 Sum_probs=46.7
Q ss_pred HhhcCCCEEEEEeccc-cHHHHHHHhhCCCCCc-----------------------c--CC----------CCceeEEEE
Q 032292 15 LRLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQ-----------------------S--EN----------EGSFDYAFV 58 (143)
Q Consensus 15 ~~~~~~~~vLeiG~g~-G~~t~~la~~~~~~~~-----------------------~--~~----------~~~fD~v~~ 58 (143)
+...+.++||.+|+|. |..++.+|+..+.... . .. ...||+||-
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~Dvvid 260 (398)
T 2dph_A 181 AGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVDCGVD 260 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCCEEEE
Confidence 3455678999999976 8888889887653100 0 00 115899885
Q ss_pred cCCccc-----------hHHHHHHHHhcccCCeEEEE
Q 032292 59 DADKDN-----------YCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 59 d~~~~~-----------~~~~~~~~~~~L~~gG~li~ 84 (143)
...... ....++.+++.|++||.+++
T Consensus 261 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~ 297 (398)
T 2dph_A 261 AVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGI 297 (398)
T ss_dssp CSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEEC
T ss_pred CCCCccccccccccccccHHHHHHHHHHHhcCCEEEE
Confidence 443221 12467888999999999875
No 311
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=89.61 E-value=0.34 Score=36.61 Aligned_cols=41 Identities=20% Similarity=0.368 Sum_probs=28.0
Q ss_pred CCCceeEEEEcCCc----cchHHH----------HHHHHhcccCCeEEEEeccCC
Q 032292 49 NEGSFDYAFVDADK----DNYCNY----------HERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 49 ~~~~fD~v~~d~~~----~~~~~~----------~~~~~~~L~~gG~li~d~~~~ 89 (143)
.-+.||+||++... ++|..+ -..++++|+|||.+++-..-+
T Consensus 208 ~~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGy 262 (324)
T 3trk_A 208 TLGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGY 262 (324)
T ss_dssp GGCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCC
T ss_pred cCCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecc
Confidence 34899999999753 334432 224458999999998865443
No 312
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=89.57 E-value=0.51 Score=35.72 Aligned_cols=67 Identities=12% Similarity=0.070 Sum_probs=46.5
Q ss_pred hhcCCCEEEEEeccc-cHHHHHHHhhCCCCCc---------------------cC-----------CCCceeEEEEcCCc
Q 032292 16 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQ---------------------SE-----------NEGSFDYAFVDADK 62 (143)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~t~~la~~~~~~~~---------------------~~-----------~~~~fD~v~~d~~~ 62 (143)
...+.++||-+|+|. |..++.+|+..+..-. .. ..+.+|.|+.....
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~ 242 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVS 242 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCC
Confidence 345678999999875 8899999988753100 00 01268888765432
Q ss_pred cchHHHHHHHHhcccCCeEEEEe
Q 032292 63 DNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 63 ~~~~~~~~~~~~~L~~gG~li~d 85 (143)
...++.+.+.|+++|.++.-
T Consensus 243 ---~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 243 ---PKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp ---HHHHHHHHHHEEEEEEEEEC
T ss_pred ---HHHHHHHHHHhccCCEEEEe
Confidence 44677888999999999864
No 313
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=89.47 E-value=0.46 Score=35.88 Aligned_cols=67 Identities=12% Similarity=-0.022 Sum_probs=46.3
Q ss_pred HhhcCCCEEEEEec--cccHHHHHHHhhCCCCCc----------------------------------cCCCCceeEEEE
Q 032292 15 LRLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQ----------------------------------SENEGSFDYAFV 58 (143)
Q Consensus 15 ~~~~~~~~vLeiG~--g~G~~t~~la~~~~~~~~----------------------------------~~~~~~fD~v~~ 58 (143)
+...+.++||-+|+ |.|..++.+++..+..-. ....+.+|+||-
T Consensus 145 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 224 (336)
T 4b7c_A 145 GQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFD 224 (336)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEE
Confidence 44567789999998 667888888877653100 001246898876
Q ss_pred cCCccchHHHHHHHHhcccCCeEEEEe
Q 032292 59 DADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 59 d~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
.... ..++.+.+.|+++|.++.-
T Consensus 225 ~~g~----~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 225 NVGG----EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp SSCH----HHHHHHHTTEEEEEEEEEC
T ss_pred CCCc----chHHHHHHHHhhCCEEEEE
Confidence 5442 4678889999999999863
No 314
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=88.50 E-value=0.39 Score=36.27 Aligned_cols=65 Identities=17% Similarity=0.049 Sum_probs=44.2
Q ss_pred hcCCCEEEEEec--cccHHHHHHHhhCCCCCc----------------------------------cCCCCceeEEEEcC
Q 032292 17 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQ----------------------------------SENEGSFDYAFVDA 60 (143)
Q Consensus 17 ~~~~~~vLeiG~--g~G~~t~~la~~~~~~~~----------------------------------~~~~~~fD~v~~d~ 60 (143)
..+.++||-+|+ |.|..++.+++..+..-. ......+|+||-..
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~ 225 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSV 225 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECC
Confidence 346789999994 667788888887643100 01134699988654
Q ss_pred CccchHHHHHHHHhcccCCeEEEEe
Q 032292 61 DKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 61 ~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
.. ..++.+.+.|++||.++.-
T Consensus 226 g~----~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 226 GK----DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp GG----GGHHHHHHHEEEEEEEEEC
T ss_pred Ch----HHHHHHHHHhccCCEEEEE
Confidence 42 3567788999999999863
No 315
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=88.22 E-value=1.5 Score=33.97 Aligned_cols=70 Identities=16% Similarity=0.062 Sum_probs=46.8
Q ss_pred hhcCCCEEEEEeccc-cHHHHHHHhhCCCCCc-----------------------cC-C-----------CCceeEEEEc
Q 032292 16 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQ-----------------------SE-N-----------EGSFDYAFVD 59 (143)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~t~~la~~~~~~~~-----------------------~~-~-----------~~~fD~v~~d 59 (143)
...+.++||-+|+|. |..++.+|+..+.... .. . ...+|+||-.
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t~g~g~Dvvid~ 261 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDA 261 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEEC
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCcEEccCCcchHHHHHHHHhCCCCCCEEEEC
Confidence 445678999999865 8888889988753101 00 0 1258998854
Q ss_pred CCccc------------hHHHHHHHHhcccCCeEEEEe
Q 032292 60 ADKDN------------YCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 60 ~~~~~------------~~~~~~~~~~~L~~gG~li~d 85 (143)
..... ....++.+++.|++||.++.-
T Consensus 262 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 262 VGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp CCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred CCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 33221 124678889999999999764
No 316
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=87.98 E-value=2.9 Score=31.79 Aligned_cols=68 Identities=12% Similarity=-0.088 Sum_probs=45.8
Q ss_pred HhhcCCCEEEEEeccc-cHHHHHHHhhCCCCCc---------------c------------------------CCCCcee
Q 032292 15 LRLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQ---------------S------------------------ENEGSFD 54 (143)
Q Consensus 15 ~~~~~~~~vLeiG~g~-G~~t~~la~~~~~~~~---------------~------------------------~~~~~fD 54 (143)
+...+.++||-+|+|. |..++.+|+..+.... . .....+|
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~D 254 (363)
T 3m6i_A 175 AGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPA 254 (363)
T ss_dssp HTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCC
Confidence 3455778999999865 7888889988764211 0 0123578
Q ss_pred EEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 032292 55 YAFVDADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 55 ~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
+||-.... ...++.+.+.|++||.++.-
T Consensus 255 vvid~~g~---~~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 255 VALECTGV---ESSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp EEEECSCC---HHHHHHHHHHSCTTCEEEEC
T ss_pred EEEECCCC---hHHHHHHHHHhcCCCEEEEE
Confidence 87743321 34577888999999999863
No 317
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=87.52 E-value=0.62 Score=34.20 Aligned_cols=36 Identities=14% Similarity=0.257 Sum_probs=25.6
Q ss_pred CCceeEEEEcCCc--c-----------ch----HHHHHHHHhcccCCeEEEEe
Q 032292 50 EGSFDYAFVDADK--D-----------NY----CNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 50 ~~~fD~v~~d~~~--~-----------~~----~~~~~~~~~~L~~gG~li~d 85 (143)
.++||+||+|-.- . +| ...++.+.++|+++|.+++.
T Consensus 21 ~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 21 NKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp TTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 3689999998521 1 12 24566778999999998765
No 318
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=87.49 E-value=0.51 Score=35.55 Aligned_cols=65 Identities=6% Similarity=-0.108 Sum_probs=44.1
Q ss_pred hcCCCEEEEEe--ccccHHHHHHHhhCCCCCc----------------------------------cCCCCceeEEEEcC
Q 032292 17 LVNAKKTIEIG--VFTGYSLLLTALTIPEDGQ----------------------------------SENEGSFDYAFVDA 60 (143)
Q Consensus 17 ~~~~~~vLeiG--~g~G~~t~~la~~~~~~~~----------------------------------~~~~~~fD~v~~d~ 60 (143)
..+.++||-+| .|.|..++.+|+..+..-. ......+|+||-..
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~ 217 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGV 217 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESS
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECC
Confidence 34678999999 4568888888887542100 01124699988654
Q ss_pred CccchHHHHHHHHhcccCCeEEEEe
Q 032292 61 DKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 61 ~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
.. ..++.+.+.|++||.++.-
T Consensus 218 g~----~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 218 GQ----DTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp CG----GGHHHHHTTEEEEEEEEEC
T ss_pred Ch----HHHHHHHHHhcCCCEEEEE
Confidence 43 3466788999999999864
No 319
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=87.48 E-value=1.6 Score=34.00 Aligned_cols=27 Identities=7% Similarity=0.047 Sum_probs=20.5
Q ss_pred hcCCCEEEEEeccc-cHHHHHHHhhCCC
Q 032292 17 LVNAKKTIEIGVFT-GYSLLLTALTIPE 43 (143)
Q Consensus 17 ~~~~~~vLeiG~g~-G~~t~~la~~~~~ 43 (143)
..+.++||-+|+|. |..++.+|+..+.
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga 238 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGA 238 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 34568999999865 7788888888754
No 320
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=87.33 E-value=0.81 Score=34.64 Aligned_cols=66 Identities=12% Similarity=-0.078 Sum_probs=42.7
Q ss_pred hhcCCCEEEEEecc--ccHHHHHHHhhCCCC--------Cc--------------------------cCCCCceeEEEEc
Q 032292 16 RLVNAKKTIEIGVF--TGYSLLLTALTIPED--------GQ--------------------------SENEGSFDYAFVD 59 (143)
Q Consensus 16 ~~~~~~~vLeiG~g--~G~~t~~la~~~~~~--------~~--------------------------~~~~~~fD~v~~d 59 (143)
...+.++||-+|+| .|..++.+|+..+.. .+ ......+|+||-.
T Consensus 141 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~ 220 (340)
T 3gms_A 141 NLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDS 220 (340)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred ccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEEC
Confidence 44567899999986 677888888765421 00 0112369988855
Q ss_pred CCccchHHHHHHHHhcccCCeEEEEe
Q 032292 60 ADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 60 ~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
.... ......+.|+++|.++.-
T Consensus 221 ~g~~----~~~~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 221 IGGP----DGNELAFSLRPNGHFLTI 242 (340)
T ss_dssp SCHH----HHHHHHHTEEEEEEEEEC
T ss_pred CCCh----hHHHHHHHhcCCCEEEEE
Confidence 4422 123445899999999864
No 321
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=87.31 E-value=0.91 Score=34.80 Aligned_cols=68 Identities=15% Similarity=0.037 Sum_probs=46.3
Q ss_pred HHhhcCCCEEEEEe--ccccHHHHHHHhhCCCCCc---------------------c------------CCCCceeEEEE
Q 032292 14 LLRLVNAKKTIEIG--VFTGYSLLLTALTIPEDGQ---------------------S------------ENEGSFDYAFV 58 (143)
Q Consensus 14 l~~~~~~~~vLeiG--~g~G~~t~~la~~~~~~~~---------------------~------------~~~~~fD~v~~ 58 (143)
.+...+.++||-+| .|.|..++.+|+..+..-. . ...+.+|+||-
T Consensus 158 ~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid 237 (362)
T 2c0c_A 158 LGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYE 237 (362)
T ss_dssp HTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred hcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEE
Confidence 34456778999999 5678888888887643100 0 01235899885
Q ss_pred cCCccchHHHHHHHHhcccCCeEEEEe
Q 032292 59 DADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 59 d~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
.... ..++.+.+.|+++|.++.-
T Consensus 238 ~~g~----~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 238 SVGG----AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp CSCT----HHHHHHHHHEEEEEEEEEC
T ss_pred CCCH----HHHHHHHHHHhcCCEEEEE
Confidence 5432 4677888999999998763
No 322
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=87.25 E-value=3 Score=31.36 Aligned_cols=70 Identities=16% Similarity=0.032 Sum_probs=45.1
Q ss_pred HhhcCCCEEEEEeccc-cHHHHHHHhhCCCCCc------------------------c-----------CCCCceeEEEE
Q 032292 15 LRLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQ------------------------S-----------ENEGSFDYAFV 58 (143)
Q Consensus 15 ~~~~~~~~vLeiG~g~-G~~t~~la~~~~~~~~------------------------~-----------~~~~~fD~v~~ 58 (143)
+...+.++||-.|+|. |..++.+|++...... . .....+|+|+-
T Consensus 156 ~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~v~d 235 (346)
T 4a2c_A 156 AQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILE 235 (346)
T ss_dssp TTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEEEEE
T ss_pred hccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCcccccc
Confidence 3445678999999864 5677778887753210 0 01234677664
Q ss_pred cCCccchHHHHHHHHhcccCCeEEEEecc
Q 032292 59 DADKDNYCNYHERLMKLLKVGGIAVYDNT 87 (143)
Q Consensus 59 d~~~~~~~~~~~~~~~~L~~gG~li~d~~ 87 (143)
... ....++.+.++|++||.+++-..
T Consensus 236 ~~G---~~~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 236 TAG---VPQTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp CSC---SHHHHHHHHHHCCTTCEEEECCC
T ss_pred ccc---ccchhhhhhheecCCeEEEEEec
Confidence 432 24567788899999999986543
No 323
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=87.20 E-value=0.81 Score=34.58 Aligned_cols=75 Identities=11% Similarity=0.053 Sum_probs=50.3
Q ss_pred HHHHHHHHhhcCCCEEEEEeccccHHHHHHHhhCCCCCc------------------------------------cCCCC
Q 032292 8 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ------------------------------------SENEG 51 (143)
Q Consensus 8 ~~~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~------------------------------------~~~~~ 51 (143)
..++..+.. .++..+||+=+|||..++.+.+.. +... .....
T Consensus 81 ~~yf~~l~~-~n~~~~LDlfaGSGaLgiEaLS~~-d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~ 158 (283)
T 2oo3_A 81 LEYISVIKQ-INLNSTLSYYPGSPYFAINQLRSQ-DRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPE 158 (283)
T ss_dssp HHHHHHHHH-HSSSSSCCEEECHHHHHHHHSCTT-SEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTT
T ss_pred HHHHHHHHH-hcCCCceeEeCCcHHHHHHHcCCC-CeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCC
Confidence 345555555 467889999999999999877632 1110 12235
Q ss_pred ceeEEEEcCC---ccchHHHHHHHH--hcccCCeEEEE
Q 032292 52 SFDYAFVDAD---KDNYCNYHERLM--KLLKVGGIAVY 84 (143)
Q Consensus 52 ~fD~v~~d~~---~~~~~~~~~~~~--~~L~~gG~li~ 84 (143)
+||+||+|-. +..|...++.+. ..+.++|++++
T Consensus 159 ~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 159 KRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCV 196 (283)
T ss_dssp SCEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEE
Confidence 7999999973 245666666665 46778998864
No 324
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=87.18 E-value=1.8 Score=32.79 Aligned_cols=67 Identities=13% Similarity=0.143 Sum_probs=45.1
Q ss_pred hhcCCCEEEEEeccc-cHHHHHHHhhCCCC--------Cc----------------cCCCCceeEEEEcCCccchHHHHH
Q 032292 16 RLVNAKKTIEIGVFT-GYSLLLTALTIPED--------GQ----------------SENEGSFDYAFVDADKDNYCNYHE 70 (143)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~t~~la~~~~~~--------~~----------------~~~~~~fD~v~~d~~~~~~~~~~~ 70 (143)
...+.++||-+|+|. |..++.+|+..+.. .+ ....+.+|+||-..... ..++
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~---~~~~ 249 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTH---YDLK 249 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSC---CCHH
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcH---HHHH
Confidence 455678999999875 78888888886531 00 01112689888544332 1356
Q ss_pred HHHhcccCCeEEEEe
Q 032292 71 RLMKLLKVGGIAVYD 85 (143)
Q Consensus 71 ~~~~~L~~gG~li~d 85 (143)
.+.+.|+++|.++.-
T Consensus 250 ~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 250 DYLKLLTYNGDLALV 264 (348)
T ss_dssp HHHTTEEEEEEEEEC
T ss_pred HHHHHHhcCCEEEEE
Confidence 778999999999864
No 325
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=86.98 E-value=0.35 Score=37.12 Aligned_cols=67 Identities=12% Similarity=-0.050 Sum_probs=44.9
Q ss_pred hhcCCCEEEEEeccc-cHHHHHHHhhCCCCCc---------------------c-C------------CCCceeEEEEcC
Q 032292 16 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQ---------------------S-E------------NEGSFDYAFVDA 60 (143)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~t~~la~~~~~~~~---------------------~-~------------~~~~fD~v~~d~ 60 (143)
...+.++||-+|+|. |..++.+|+..+..-. . . ....+|+||-..
T Consensus 186 ~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~ 265 (363)
T 3uog_A 186 HLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIA 265 (363)
T ss_dssp CCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEET
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECC
Confidence 345678999999875 7788888887653100 0 0 122689888554
Q ss_pred CccchHHHHHHHHhcccCCeEEEEec
Q 032292 61 DKDNYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 61 ~~~~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
.. ..++.+++.|+++|.++.-.
T Consensus 266 g~----~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 266 GG----AGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp TS----SCHHHHHHHEEEEEEEEEEC
T ss_pred Ch----HHHHHHHHHhhcCCEEEEEe
Confidence 42 23567789999999988643
No 326
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=86.78 E-value=3.3 Score=31.37 Aligned_cols=68 Identities=10% Similarity=0.011 Sum_probs=45.5
Q ss_pred HhhcCCCEEEEEeccc-cHHHHHHHhhCCCCCc---------------------c-C--C--------------CCceeE
Q 032292 15 LRLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQ---------------------S-E--N--------------EGSFDY 55 (143)
Q Consensus 15 ~~~~~~~~vLeiG~g~-G~~t~~la~~~~~~~~---------------------~-~--~--------------~~~fD~ 55 (143)
+...+.++||-+|+|. |..++.+|+..+..-. . . . .+.+|+
T Consensus 164 ~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~ 243 (352)
T 1e3j_A 164 AGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNV 243 (352)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCE
Confidence 3455678999999875 7788888887653100 0 1 0 135888
Q ss_pred EEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 032292 56 AFVDADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 56 v~~d~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
||-.... ...++.+++.|+++|.++.-
T Consensus 244 vid~~g~---~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 244 TIDCSGN---EKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp EEECSCC---HHHHHHHHHHSCTTCEEEEC
T ss_pred EEECCCC---HHHHHHHHHHHhcCCEEEEE
Confidence 8754332 34567888999999999863
No 327
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=86.67 E-value=1.2 Score=34.71 Aligned_cols=75 Identities=11% Similarity=-0.037 Sum_probs=50.9
Q ss_pred HHHHHhhcCCCEEEEEeccccHHHHHHHhhCCC---CCc--------------------------cCCCCceeEEEEcCC
Q 032292 11 MAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE---DGQ--------------------------SENEGSFDYAFVDAD 61 (143)
Q Consensus 11 l~~l~~~~~~~~vLeiG~g~G~~t~~la~~~~~---~~~--------------------------~~~~~~fD~v~~d~~ 61 (143)
|..+.......+||.++.+.|..+.+++..-+. +.. ......||+|++.-.
T Consensus 30 l~~~~~~~~~~~~~~~~d~~gal~~~~~~~~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~lp 109 (375)
T 4dcm_A 30 LQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVP 109 (375)
T ss_dssp HHTTTTCCCCSCEEEECCSSSHHHHHTGGGCCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEETTSCCCSSCSEEEEECC
T ss_pred HHhhhhccCCCCEEEECCCCCHHHHhhccCCceEEEhHHHHHHHHHHHHHHcCCCccceEecccccccccCCCEEEEEcC
Confidence 333333334578999999999999999865221 111 233568999998765
Q ss_pred cc--chHHHHHHHHhcccCCeEEEEe
Q 032292 62 KD--NYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 62 ~~--~~~~~~~~~~~~L~~gG~li~d 85 (143)
+. .....+..+.+.|++|+.+++-
T Consensus 110 k~~~~l~~~L~~l~~~l~~~~~i~~~ 135 (375)
T 4dcm_A 110 KTLALLEQQLRALRKVVTSDTRIIAG 135 (375)
T ss_dssp SCHHHHHHHHHHHHTTCCTTSEEEEE
T ss_pred CCHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 53 3345677888999999988754
No 328
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=86.40 E-value=1.3 Score=34.01 Aligned_cols=68 Identities=18% Similarity=0.222 Sum_probs=45.3
Q ss_pred hhcCCCEEEEEeccc-cHHHHHHHhhCCCCCc-----------------------cC-------------CCCceeEEEE
Q 032292 16 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQ-----------------------SE-------------NEGSFDYAFV 58 (143)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~t~~la~~~~~~~~-----------------------~~-------------~~~~fD~v~~ 58 (143)
...+.++||-+|+|. |..++.+|+..+..-. .. ..+.+|+||-
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid 269 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFE 269 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEE
Confidence 345678999999874 7888888887653100 00 1125888874
Q ss_pred cCCccchHHHHHHHHhcccCC-eEEEEec
Q 032292 59 DADKDNYCNYHERLMKLLKVG-GIAVYDN 86 (143)
Q Consensus 59 d~~~~~~~~~~~~~~~~L~~g-G~li~d~ 86 (143)
... ....++.+++.|++| |.++.-.
T Consensus 270 ~~g---~~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 270 CIG---NVSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp CSC---CHHHHHHHHHTBCTTTCEEEECS
T ss_pred CCC---CHHHHHHHHHHhhccCCEEEEEc
Confidence 433 245677889999997 9988643
No 329
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=86.07 E-value=0.9 Score=34.54 Aligned_cols=36 Identities=22% Similarity=0.242 Sum_probs=26.1
Q ss_pred CCceeEEEEcCCc--c---------------chHHHHHHHHhcccCCeEEEEe
Q 032292 50 EGSFDYAFVDADK--D---------------NYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 50 ~~~fD~v~~d~~~--~---------------~~~~~~~~~~~~L~~gG~li~d 85 (143)
.++||+||+|-.- . .+...++.+.++|+|||.+++.
T Consensus 31 ~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~ 83 (323)
T 1boo_A 31 EESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVD 83 (323)
T ss_dssp SSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEE
Confidence 4689999998421 1 1234677788999999988763
No 330
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=85.80 E-value=0.85 Score=34.32 Aligned_cols=66 Identities=9% Similarity=0.030 Sum_probs=44.0
Q ss_pred hhcCCCEEEEEec--cccHHHHHHHhhCCCCCc---------------------c--C-----------CCCceeEEEEc
Q 032292 16 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQ---------------------S--E-----------NEGSFDYAFVD 59 (143)
Q Consensus 16 ~~~~~~~vLeiG~--g~G~~t~~la~~~~~~~~---------------------~--~-----------~~~~fD~v~~d 59 (143)
...+.++||..|+ |.|..++.+++..+..-. . . ..+.+|+++-.
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~ 221 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDN 221 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEES
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEEC
Confidence 3456789999997 677777777776542100 0 0 01358988866
Q ss_pred CCccchHHHHHHHHhcccCCeEEEEe
Q 032292 60 ADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 60 ~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
+.. ..++.+.+.|++||.++.-
T Consensus 222 ~g~----~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 222 VGG----EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp SCH----HHHHHHHTTEEEEEEEEEC
T ss_pred CCh----HHHHHHHHHHhcCCEEEEE
Confidence 542 3477888999999998763
No 331
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=85.70 E-value=0.8 Score=34.79 Aligned_cols=66 Identities=11% Similarity=0.082 Sum_probs=44.6
Q ss_pred hhcCCCEEEEEec--cccHHHHHHHhhCCCCC--------c---------------c----------CCCCceeEEEEcC
Q 032292 16 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDG--------Q---------------S----------ENEGSFDYAFVDA 60 (143)
Q Consensus 16 ~~~~~~~vLeiG~--g~G~~t~~la~~~~~~~--------~---------------~----------~~~~~fD~v~~d~ 60 (143)
...+.++||-+|+ |.|..++.+|+..+..- + . .....+|+||-..
T Consensus 156 ~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~ 235 (342)
T 4eye_A 156 QLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPI 235 (342)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECC
Confidence 3456789999996 66888888888865310 0 0 0123699988654
Q ss_pred CccchHHHHHHHHhcccCCeEEEEe
Q 032292 61 DKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 61 ~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
... .++.+.+.|+++|.++.-
T Consensus 236 g~~----~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 236 GGP----AFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp C------CHHHHHHTEEEEEEEEEC
T ss_pred chh----HHHHHHHhhcCCCEEEEE
Confidence 432 466788999999999863
No 332
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=85.66 E-value=2.6 Score=32.37 Aligned_cols=66 Identities=18% Similarity=0.169 Sum_probs=44.4
Q ss_pred hhcCCCEEEEEeccc-cHHHHHHHhhCCCCC--------c-------------c--------CCCCceeEEEEcCCccch
Q 032292 16 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDG--------Q-------------S--------ENEGSFDYAFVDADKDNY 65 (143)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~t~~la~~~~~~~--------~-------------~--------~~~~~fD~v~~d~~~~~~ 65 (143)
...+.++||-+|+|. |..++.+|+..+..- + . ...+.+|+||-......
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~- 269 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPH- 269 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCC-
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHH-
Confidence 445678999999975 788888888765310 0 0 11146899885443221
Q ss_pred HHHHHHHHhcccCCeEEEE
Q 032292 66 CNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 66 ~~~~~~~~~~L~~gG~li~ 84 (143)
.++.+.+.|+++|.++.
T Consensus 270 --~~~~~~~~l~~~G~iv~ 286 (369)
T 1uuf_A 270 --NLDDFTTLLKRDGTMTL 286 (369)
T ss_dssp --CHHHHHTTEEEEEEEEE
T ss_pred --HHHHHHHHhccCCEEEE
Confidence 35577899999999876
No 333
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=85.33 E-value=1.6 Score=33.49 Aligned_cols=67 Identities=16% Similarity=0.244 Sum_probs=44.4
Q ss_pred hhcCCCEEEEEeccc-cHHHHHHHhhCCCCCc------------------------cC------------CCCceeEEEE
Q 032292 16 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQ------------------------SE------------NEGSFDYAFV 58 (143)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~t~~la~~~~~~~~------------------------~~------------~~~~fD~v~~ 58 (143)
...+.++||-+|+|. |..++.+|+..+.... .. ..+.+|+||-
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid 267 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVE 267 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEE
Confidence 445678999999864 7788888887653100 00 0125888874
Q ss_pred cCCccchHHHHHHHHhcccCC-eEEEEe
Q 032292 59 DADKDNYCNYHERLMKLLKVG-GIAVYD 85 (143)
Q Consensus 59 d~~~~~~~~~~~~~~~~L~~g-G~li~d 85 (143)
.... ...++.+++.|+++ |.++.-
T Consensus 268 ~~g~---~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 268 CAGR---IETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp CSCC---HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCC---HHHHHHHHHHHhcCCCEEEEE
Confidence 4322 34577888999999 998763
No 334
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=84.97 E-value=2.4 Score=32.45 Aligned_cols=67 Identities=12% Similarity=0.231 Sum_probs=44.5
Q ss_pred hhcCCCEEEEEeccc-cHHHHHHHhhCCCCCc------------------------cC------------CCCceeEEEE
Q 032292 16 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQ------------------------SE------------NEGSFDYAFV 58 (143)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~t~~la~~~~~~~~------------------------~~------------~~~~fD~v~~ 58 (143)
...+.++||-+|+|. |..++.+|+....... .. ..+.+|+||-
T Consensus 188 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid 267 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFE 267 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEE
Confidence 345678999999875 7788888887653100 00 0125888874
Q ss_pred cCCccchHHHHHHHHhcccCC-eEEEEe
Q 032292 59 DADKDNYCNYHERLMKLLKVG-GIAVYD 85 (143)
Q Consensus 59 d~~~~~~~~~~~~~~~~L~~g-G~li~d 85 (143)
.... ...++.+++.|+++ |.++.-
T Consensus 268 ~~g~---~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 268 VIGR---LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp CSCC---HHHHHHHHHHBCTTTCEEEEC
T ss_pred CCCC---HHHHHHHHHHhhcCCcEEEEe
Confidence 4332 34577888999999 998763
No 335
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=84.75 E-value=1.7 Score=33.26 Aligned_cols=67 Identities=10% Similarity=0.214 Sum_probs=44.5
Q ss_pred hhcCCCEEEEEeccc-cHHHHHHHhhCCCCCc------------------------cC--C----------CCceeEEEE
Q 032292 16 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQ------------------------SE--N----------EGSFDYAFV 58 (143)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~t~~la~~~~~~~~------------------------~~--~----------~~~fD~v~~ 58 (143)
...+.++||-+|+|. |..++.+|+..+.... .. . .+.+|+||-
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid 268 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLE 268 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEE
Confidence 344678999999864 7788888887653100 00 0 125888874
Q ss_pred cCCccchHHHHHHHHhcccCC-eEEEEe
Q 032292 59 DADKDNYCNYHERLMKLLKVG-GIAVYD 85 (143)
Q Consensus 59 d~~~~~~~~~~~~~~~~L~~g-G~li~d 85 (143)
.... ...++.+++.|+++ |.++.-
T Consensus 269 ~~g~---~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 269 CVGN---VGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp CSCC---HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCC---HHHHHHHHHHhhcCCcEEEEE
Confidence 4332 34577888999999 998763
No 336
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=84.46 E-value=0.72 Score=34.66 Aligned_cols=65 Identities=11% Similarity=-0.027 Sum_probs=43.1
Q ss_pred hcCCCEEEEEe--ccccHHHHHHHhhCCCCCc----------------------------------cCCCCceeEEEEcC
Q 032292 17 LVNAKKTIEIG--VFTGYSLLLTALTIPEDGQ----------------------------------SENEGSFDYAFVDA 60 (143)
Q Consensus 17 ~~~~~~vLeiG--~g~G~~t~~la~~~~~~~~----------------------------------~~~~~~fD~v~~d~ 60 (143)
..+.++||-+| .|.|..++.+++..+..-. ......+|+++-.+
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~ 217 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSV 217 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECC
Confidence 34578999999 4667777777776432100 01123699988665
Q ss_pred CccchHHHHHHHHhcccCCeEEEEe
Q 032292 61 DKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 61 ~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
. ...++.+.+.|+++|.++.-
T Consensus 218 g----~~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 218 G----RDTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp C----GGGHHHHHHTEEEEEEEEEC
T ss_pred c----hHHHHHHHHHhcCCCEEEEE
Confidence 4 23467788999999998763
No 337
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=84.38 E-value=1 Score=34.29 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=26.2
Q ss_pred CCceeEEEEcCC----------ccchH----HHHHHHHhcccCCeEEEEe
Q 032292 50 EGSFDYAFVDAD----------KDNYC----NYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 50 ~~~fD~v~~d~~----------~~~~~----~~~~~~~~~L~~gG~li~d 85 (143)
.++||+||+|-. ...|. ..+..+.++|+|||.+++.
T Consensus 56 ~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 56 DDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp TTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 468999999853 12343 4566778999999999774
No 338
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=83.22 E-value=2.5 Score=32.26 Aligned_cols=67 Identities=15% Similarity=0.267 Sum_probs=44.0
Q ss_pred hhcCCCEEEEEeccc-cHHHHHHHhhCCCCCc------------------------cC--C----------CCceeEEEE
Q 032292 16 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQ------------------------SE--N----------EGSFDYAFV 58 (143)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~t~~la~~~~~~~~------------------------~~--~----------~~~fD~v~~ 58 (143)
...+.++||-+|+|. |..++.+|+..+.... .. . .+.+|+||-
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid 266 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFE 266 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEE
Confidence 344678999999865 7778888887643100 00 0 125888875
Q ss_pred cCCccchHHHHHHHHhcccCC-eEEEEe
Q 032292 59 DADKDNYCNYHERLMKLLKVG-GIAVYD 85 (143)
Q Consensus 59 d~~~~~~~~~~~~~~~~L~~g-G~li~d 85 (143)
.... ...++.+++.|+++ |.++.-
T Consensus 267 ~~g~---~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 267 CIGN---VKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp CSCC---HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCc---HHHHHHHHHhhccCCcEEEEE
Confidence 4332 34577889999999 998863
No 339
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=83.20 E-value=1.6 Score=32.96 Aligned_cols=66 Identities=14% Similarity=0.038 Sum_probs=45.1
Q ss_pred hhcCCCEEEEEeccc-cHHHHHHHhhCCCCCc------------------------cC-----------CCCceeEEEEc
Q 032292 16 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQ------------------------SE-----------NEGSFDYAFVD 59 (143)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~t~~la~~~~~~~~------------------------~~-----------~~~~fD~v~~d 59 (143)
...+.++||-+|+|. |..++.+|+.... .+ .. ....+|+||-.
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~-~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~ 246 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSA-ARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDF 246 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCC-CEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEES
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEEC
Confidence 455678999999875 7888888887632 11 00 01268888744
Q ss_pred CCccchHHHHHHHHhcccCCeEEEEe
Q 032292 60 ADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 60 ~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
... ...++.+.+.|+++|.++.-
T Consensus 247 ~G~---~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 247 VGA---QSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp SCC---HHHHHHHHHHEEEEEEEEEC
T ss_pred CCC---HHHHHHHHHHHhcCCEEEEE
Confidence 332 34677889999999999864
No 340
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=83.02 E-value=1.2 Score=37.01 Aligned_cols=40 Identities=15% Similarity=0.375 Sum_probs=27.7
Q ss_pred CCceeEEEEcCCc----cchHHH----------HHHHHhcccCCeEEEEeccCC
Q 032292 50 EGSFDYAFVDADK----DNYCNY----------HERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 50 ~~~fD~v~~d~~~----~~~~~~----------~~~~~~~L~~gG~li~d~~~~ 89 (143)
.++||+||++... ++|... -...+.+|+|||.+++-..-+
T Consensus 219 ~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGy 272 (670)
T 4gua_A 219 QARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGY 272 (670)
T ss_dssp CCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred CCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeec
Confidence 4699999999743 344432 234568999999998765443
No 341
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=82.89 E-value=2.5 Score=32.38 Aligned_cols=66 Identities=15% Similarity=0.177 Sum_probs=44.0
Q ss_pred hcCCCEEEEEeccc-cHHHHHHHhhCCCCCc------------------------cC--C----------CCceeEEEEc
Q 032292 17 LVNAKKTIEIGVFT-GYSLLLTALTIPEDGQ------------------------SE--N----------EGSFDYAFVD 59 (143)
Q Consensus 17 ~~~~~~vLeiG~g~-G~~t~~la~~~~~~~~------------------------~~--~----------~~~fD~v~~d 59 (143)
..+.++||-+|+|. |..++.+|+....... .. . .+.+|+||-.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~ 272 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDC 272 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEEC
Confidence 44668999999874 7788888887653100 00 0 1258888744
Q ss_pred CCccchHHHHHHHHhcccCC-eEEEEe
Q 032292 60 ADKDNYCNYHERLMKLLKVG-GIAVYD 85 (143)
Q Consensus 60 ~~~~~~~~~~~~~~~~L~~g-G~li~d 85 (143)
... ...++.+++.|+++ |.++.-
T Consensus 273 ~G~---~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 273 AGT---AQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp SCC---HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCC---HHHHHHHHHHhhcCCCEEEEE
Confidence 322 34577889999999 998763
No 342
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=82.33 E-value=1.1 Score=33.82 Aligned_cols=65 Identities=9% Similarity=0.043 Sum_probs=43.8
Q ss_pred hcCCCEEEEEec--cccHHHHHHHhhCCCCCc---------------------c-------------CCCCceeEEEEcC
Q 032292 17 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQ---------------------S-------------ENEGSFDYAFVDA 60 (143)
Q Consensus 17 ~~~~~~vLeiG~--g~G~~t~~la~~~~~~~~---------------------~-------------~~~~~fD~v~~d~ 60 (143)
..+.++||-+|+ |.|..++.+++..+..-. . .....+|++|-.+
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~ 222 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSI 222 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECS
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECC
Confidence 446789999994 677888888877542100 0 0123689988655
Q ss_pred CccchHHHHHHHHhcccCCeEEEEe
Q 032292 61 DKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 61 ~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
.. ..++.+.+.|+++|.++.-
T Consensus 223 g~----~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 223 GK----DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp CT----TTHHHHHHTEEEEEEEEEC
T ss_pred cH----HHHHHHHHhhccCCEEEEE
Confidence 43 3467888999999998763
No 343
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=82.24 E-value=1.5 Score=32.73 Aligned_cols=36 Identities=19% Similarity=0.251 Sum_probs=24.5
Q ss_pred CCceeEEEEcCCc---cc----------------h----HHHHHHHHhcccCCeEEEEe
Q 032292 50 EGSFDYAFVDADK---DN----------------Y----CNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 50 ~~~fD~v~~d~~~---~~----------------~----~~~~~~~~~~L~~gG~li~d 85 (143)
+++||+|++|-.- .+ + ...++++.++|+|||.+++.
T Consensus 38 ~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 38 EASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp TTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 4789999998421 11 1 23456778999999988653
No 344
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=82.20 E-value=3.6 Score=31.44 Aligned_cols=63 Identities=13% Similarity=0.085 Sum_probs=41.9
Q ss_pred CCCEEEEEe-c-cccHHHHHHHhhC-CCC-----Cc---------------------------cCCCCceeEEEEcCCcc
Q 032292 19 NAKKTIEIG-V-FTGYSLLLTALTI-PED-----GQ---------------------------SENEGSFDYAFVDADKD 63 (143)
Q Consensus 19 ~~~~vLeiG-~-g~G~~t~~la~~~-~~~-----~~---------------------------~~~~~~fD~v~~d~~~~ 63 (143)
+.++||-+| + +.|..++.+|+.+ ... .. ....+.+|+||-...
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~~g-- 248 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTH-- 248 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEECSC--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEECCC--
Confidence 456899998 4 4588888898874 310 00 111246898874432
Q ss_pred chHHHHHHHHhcccCCeEEEE
Q 032292 64 NYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 64 ~~~~~~~~~~~~L~~gG~li~ 84 (143)
-...++.+.++|+++|.++.
T Consensus 249 -~~~~~~~~~~~l~~~G~iv~ 268 (363)
T 4dvj_A 249 -TDKHAAEIADLIAPQGRFCL 268 (363)
T ss_dssp -HHHHHHHHHHHSCTTCEEEE
T ss_pred -chhhHHHHHHHhcCCCEEEE
Confidence 23467788899999999986
No 345
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=81.62 E-value=3.6 Score=31.09 Aligned_cols=64 Identities=11% Similarity=-0.012 Sum_probs=43.5
Q ss_pred CCCEEEEEeccc-cHHHHHHHhhCCC-CCc---------------------c-------------CCCCceeEEEEcCCc
Q 032292 19 NAKKTIEIGVFT-GYSLLLTALTIPE-DGQ---------------------S-------------ENEGSFDYAFVDADK 62 (143)
Q Consensus 19 ~~~~vLeiG~g~-G~~t~~la~~~~~-~~~---------------------~-------------~~~~~fD~v~~d~~~ 62 (143)
+.++||-+|+|. |..++.+|+..+. .-. . .....+|+||-....
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~ 246 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGA 246 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 568999999863 7788888887653 100 0 011258998855432
Q ss_pred cchHHHHHHHHhcccCCeEEEEe
Q 032292 63 DNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 63 ~~~~~~~~~~~~~L~~gG~li~d 85 (143)
...++.+.+.|+++|.++.-
T Consensus 247 ---~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 247 ---PKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp ---HHHHHHHHHHEEEEEEEEEC
T ss_pred ---HHHHHHHHHHHhcCCEEEEE
Confidence 34577888999999998763
No 346
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=80.96 E-value=1.5 Score=33.52 Aligned_cols=66 Identities=14% Similarity=0.031 Sum_probs=43.6
Q ss_pred hhcCCCEEEEEec--cccHHHHHHHhhCCCCCc-----------------------c-----------CCCCceeEEEEc
Q 032292 16 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQ-----------------------S-----------ENEGSFDYAFVD 59 (143)
Q Consensus 16 ~~~~~~~vLeiG~--g~G~~t~~la~~~~~~~~-----------------------~-----------~~~~~fD~v~~d 59 (143)
...+.++||-.|+ |.|..++.+++..+..-. . .....+|+|+-.
T Consensus 167 ~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~ 246 (351)
T 1yb5_A 167 CVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEM 246 (351)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEES
T ss_pred CCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEEC
Confidence 3456789999996 667778888876542100 0 012368988755
Q ss_pred CCccchHHHHHHHHhcccCCeEEEEe
Q 032292 60 ADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 60 ~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
+.. ..++.+.+.|+++|.++.-
T Consensus 247 ~G~----~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 247 LAN----VNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp CHH----HHHHHHHHHEEEEEEEEEC
T ss_pred CCh----HHHHHHHHhccCCCEEEEE
Confidence 432 3467788999999998763
No 347
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=80.80 E-value=11 Score=28.11 Aligned_cols=67 Identities=15% Similarity=-0.077 Sum_probs=42.8
Q ss_pred hhcCCCEEEEEecccc-HHHHHHHhhCCCCCc------------------------------------cCCCCceeEEEE
Q 032292 16 RLVNAKKTIEIGVFTG-YSLLLTALTIPEDGQ------------------------------------SENEGSFDYAFV 58 (143)
Q Consensus 16 ~~~~~~~vLeiG~g~G-~~t~~la~~~~~~~~------------------------------------~~~~~~fD~v~~ 58 (143)
...+.++||-+|+|.+ ..++.+++.... .+ ......+|.++.
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~g-~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~ 238 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVFG-AKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIV 238 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTSC-CEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEE
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhCC-CEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEE
Confidence 3456789999999864 455556665432 11 011235777776
Q ss_pred cCCccchHHHHHHHHhcccCCeEEEEec
Q 032292 59 DADKDNYCNYHERLMKLLKVGGIAVYDN 86 (143)
Q Consensus 59 d~~~~~~~~~~~~~~~~L~~gG~li~d~ 86 (143)
+... ...++...+.|+++|.++.-.
T Consensus 239 ~~~~---~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 239 CAVA---RIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp CCSC---HHHHHHHHHTEEEEEEEEECC
T ss_pred eccC---cchhheeheeecCCceEEEEe
Confidence 6532 446778889999999987643
No 348
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=80.72 E-value=2.7 Score=31.90 Aligned_cols=67 Identities=10% Similarity=0.033 Sum_probs=44.1
Q ss_pred HhhcCC--CEEEEEec--cccHHHHHHHhhCCC-CCc-------------c---------------------CCCCceeE
Q 032292 15 LRLVNA--KKTIEIGV--FTGYSLLLTALTIPE-DGQ-------------S---------------------ENEGSFDY 55 (143)
Q Consensus 15 ~~~~~~--~~vLeiG~--g~G~~t~~la~~~~~-~~~-------------~---------------------~~~~~fD~ 55 (143)
+...+. ++||-.|+ |.|..++.+++..+. .-. . ...+.+|+
T Consensus 154 ~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~d~ 233 (357)
T 2zb4_A 154 GHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDV 233 (357)
T ss_dssp SCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTTCEEE
T ss_pred cCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCCCCCE
Confidence 345566 89999997 667777777776543 100 0 00125788
Q ss_pred EEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 032292 56 AFVDADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 56 v~~d~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
++-.... ..++.+.++|+++|.++.-
T Consensus 234 vi~~~G~----~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 234 YFDNVGG----NISDTVISQMNENSHIILC 259 (357)
T ss_dssp EEESCCH----HHHHHHHHTEEEEEEEEEC
T ss_pred EEECCCH----HHHHHHHHHhccCcEEEEE
Confidence 7755542 5677889999999999763
No 349
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=80.55 E-value=1.5 Score=33.05 Aligned_cols=65 Identities=9% Similarity=-0.010 Sum_probs=43.6
Q ss_pred hhcCCCEEEEEec--cccHHHHHHHhhCCCCCc----------------------c--C-----------CCCceeEEEE
Q 032292 16 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQ----------------------S--E-----------NEGSFDYAFV 58 (143)
Q Consensus 16 ~~~~~~~vLeiG~--g~G~~t~~la~~~~~~~~----------------------~--~-----------~~~~fD~v~~ 58 (143)
...+.++||-+|+ |.|..++.+++..+..-. . . ..+.+|+|+-
T Consensus 152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~ 231 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFE 231 (345)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEE
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEE
Confidence 3456789999997 677888888876542100 0 0 0135888875
Q ss_pred cCCccchHHHHHHHHhcccCCeEEEE
Q 032292 59 DADKDNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 59 d~~~~~~~~~~~~~~~~L~~gG~li~ 84 (143)
.... ..++.+.+.|++||.++.
T Consensus 232 ~~g~----~~~~~~~~~l~~~G~~v~ 253 (345)
T 2j3h_A 232 NVGG----KMLDAVLVNMNMHGRIAV 253 (345)
T ss_dssp SSCH----HHHHHHHTTEEEEEEEEE
T ss_pred CCCH----HHHHHHHHHHhcCCEEEE
Confidence 5432 367788899999999976
No 350
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=80.26 E-value=1.9 Score=31.99 Aligned_cols=63 Identities=21% Similarity=0.209 Sum_probs=43.7
Q ss_pred hcCCCEEEEEec--cccHHHHHHHhhCCCCC--------c-------------cCCC--------CceeEEEEcCCccch
Q 032292 17 LVNAKKTIEIGV--FTGYSLLLTALTIPEDG--------Q-------------SENE--------GSFDYAFVDADKDNY 65 (143)
Q Consensus 17 ~~~~~~vLeiG~--g~G~~t~~la~~~~~~~--------~-------------~~~~--------~~fD~v~~d~~~~~~ 65 (143)
..+.++||-+|+ |.|..++.+|+..+..- + ...+ +.+|+||- ...
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~--- 198 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRG--- 198 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSC---
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCH---
Confidence 456789999997 66888888888765310 0 0011 35898886 543
Q ss_pred HHHHHHHHhcccCCeEEEE
Q 032292 66 CNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 66 ~~~~~~~~~~L~~gG~li~ 84 (143)
..++.+.+.|+++|.++.
T Consensus 199 -~~~~~~~~~l~~~G~~v~ 216 (302)
T 1iz0_A 199 -KEVEESLGLLAHGGRLVY 216 (302)
T ss_dssp -TTHHHHHTTEEEEEEEEE
T ss_pred -HHHHHHHHhhccCCEEEE
Confidence 256788899999999875
No 351
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=79.52 E-value=1.4 Score=34.60 Aligned_cols=25 Identities=24% Similarity=0.230 Sum_probs=21.1
Q ss_pred cCCCEEEEEeccccHHHHHHH-hhCC
Q 032292 18 VNAKKTIEIGVFTGYSLLLTA-LTIP 42 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la-~~~~ 42 (143)
.+...++|||++.|..++.++ +..+
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~ 250 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKG 250 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTS
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcC
Confidence 466899999999999999988 4554
No 352
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=79.45 E-value=1.1 Score=33.84 Aligned_cols=65 Identities=11% Similarity=0.051 Sum_probs=44.3
Q ss_pred hcCCCEEEEEec--cccHHHHHHHhhCCCCCc-----------------------c-----------CCCCceeEEEEcC
Q 032292 17 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQ-----------------------S-----------ENEGSFDYAFVDA 60 (143)
Q Consensus 17 ~~~~~~vLeiG~--g~G~~t~~la~~~~~~~~-----------------------~-----------~~~~~fD~v~~d~ 60 (143)
..+.++||-+|+ |.|..++.+++..+..-. . .....+|+|+-..
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~ 243 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHT 243 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEEEEESS
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECC
Confidence 345689999998 678888888887643100 0 0123689988665
Q ss_pred CccchHHHHHHHHhcccCCeEEEEe
Q 032292 61 DKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 61 ~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
. .. .++.+.+.|+++|.++.-
T Consensus 244 g-~~---~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 244 G-AL---YFEGVIKATANGGRIAIA 264 (343)
T ss_dssp C-SS---SHHHHHHHEEEEEEEEES
T ss_pred C-HH---HHHHHHHhhccCCEEEEE
Confidence 5 22 456778999999998763
No 353
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=78.37 E-value=1.5 Score=33.43 Aligned_cols=66 Identities=17% Similarity=0.111 Sum_probs=43.9
Q ss_pred hhcCCCEEEEEe--ccccHHHHHHHhhCCCCCc---------------------c------------CCCCceeEEEEcC
Q 032292 16 RLVNAKKTIEIG--VFTGYSLLLTALTIPEDGQ---------------------S------------ENEGSFDYAFVDA 60 (143)
Q Consensus 16 ~~~~~~~vLeiG--~g~G~~t~~la~~~~~~~~---------------------~------------~~~~~fD~v~~d~ 60 (143)
...+.++||-+| .|.|..++.+|+..+..-. . ...+.+|+||-..
T Consensus 164 ~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~ 243 (353)
T 4dup_A 164 GLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMI 243 (353)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESC
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECC
Confidence 345678999995 4568888888887653100 0 0024699888655
Q ss_pred CccchHHHHHHHHhcccCCeEEEEe
Q 032292 61 DKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 61 ~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
... .++.+.+.|+++|.++.-
T Consensus 244 g~~----~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 244 GAA----YFERNIASLAKDGCLSII 264 (353)
T ss_dssp CGG----GHHHHHHTEEEEEEEEEC
T ss_pred CHH----HHHHHHHHhccCCEEEEE
Confidence 432 466788999999998763
No 354
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=77.94 E-value=2.7 Score=31.79 Aligned_cols=66 Identities=14% Similarity=0.059 Sum_probs=44.1
Q ss_pred hcCCCEEEEEec--cccHHHHHHHhhCCCC--------Cc-------------c-C-C-----------CCceeEEEEcC
Q 032292 17 LVNAKKTIEIGV--FTGYSLLLTALTIPED--------GQ-------------S-E-N-----------EGSFDYAFVDA 60 (143)
Q Consensus 17 ~~~~~~vLeiG~--g~G~~t~~la~~~~~~--------~~-------------~-~-~-----------~~~fD~v~~d~ 60 (143)
..+.++||.+|+ |.|..++.+++..+.. .+ . . . .+.+|+|+-..
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~ 246 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVS 246 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECS
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECC
Confidence 346689999998 6788888888765421 00 0 0 0 11588887654
Q ss_pred CccchHHHHHHHHhcccCCeEEEEe
Q 032292 61 DKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 61 ~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
.. ...++.+.+.|+++|.++.-
T Consensus 247 g~---~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 247 VS---EAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp SC---HHHHHHHTTSEEEEEEEEEC
T ss_pred Cc---HHHHHHHHHHHhcCCEEEEE
Confidence 32 34677888999999998763
No 355
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=77.60 E-value=5.9 Score=30.29 Aligned_cols=65 Identities=11% Similarity=-0.014 Sum_probs=43.7
Q ss_pred cCCCEEEEEec--cccHHHHHHHhhCCCCC-------c-------------------------cCCCCceeEEEEcCCcc
Q 032292 18 VNAKKTIEIGV--FTGYSLLLTALTIPEDG-------Q-------------------------SENEGSFDYAFVDADKD 63 (143)
Q Consensus 18 ~~~~~vLeiG~--g~G~~t~~la~~~~~~~-------~-------------------------~~~~~~fD~v~~d~~~~ 63 (143)
.+.++||-+|+ +.|..++.+|+..+..- + ....+.+|+||-....
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~- 241 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITN- 241 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSCS-
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCCc-
Confidence 56789999998 47889999998865310 0 0112458988844332
Q ss_pred chHHHHHHHHhcc-cCCeEEEEe
Q 032292 64 NYCNYHERLMKLL-KVGGIAVYD 85 (143)
Q Consensus 64 ~~~~~~~~~~~~L-~~gG~li~d 85 (143)
...++.+++.| ++||.++.-
T Consensus 242 --~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 242 --VESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp --HHHHHHHHHHSCTTCEEEEES
T ss_pred --hHHHHHHHHHhhcCCCEEEEE
Confidence 34567788888 699998763
No 356
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=77.47 E-value=1.8 Score=32.71 Aligned_cols=67 Identities=18% Similarity=0.018 Sum_probs=44.9
Q ss_pred HhhcCCCEEEEEecc--ccHHHHHHHhhC-CCCCc-----------------------c----------CCC-CceeEEE
Q 032292 15 LRLVNAKKTIEIGVF--TGYSLLLTALTI-PEDGQ-----------------------S----------ENE-GSFDYAF 57 (143)
Q Consensus 15 ~~~~~~~~vLeiG~g--~G~~t~~la~~~-~~~~~-----------------------~----------~~~-~~fD~v~ 57 (143)
+...+.++||-+|+| .|..++.+++.. +..-. . ... +.+|+|+
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 245 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVI 245 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHhcCCCceEEE
Confidence 344567899999987 666777777765 42100 0 011 4789988
Q ss_pred EcCCccchHHHHHHHHhcccCCeEEEE
Q 032292 58 VDADKDNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 58 ~d~~~~~~~~~~~~~~~~L~~gG~li~ 84 (143)
-.... ...++.+.+.|+++|.++.
T Consensus 246 ~~~g~---~~~~~~~~~~l~~~G~iv~ 269 (347)
T 1jvb_A 246 DLNNS---EKTLSVYPKALAKQGKYVM 269 (347)
T ss_dssp ESCCC---HHHHTTGGGGEEEEEEEEE
T ss_pred ECCCC---HHHHHHHHHHHhcCCEEEE
Confidence 65542 3456778899999999876
No 357
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=76.89 E-value=2.3 Score=32.35 Aligned_cols=37 Identities=22% Similarity=0.318 Sum_probs=25.6
Q ss_pred CCCceeEEEEcCCc----cchH------H----HHHHHHhcccCCeEEEEe
Q 032292 49 NEGSFDYAFVDADK----DNYC------N----YHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 49 ~~~~fD~v~~d~~~----~~~~------~----~~~~~~~~L~~gG~li~d 85 (143)
..+++|+||+|... ..|. . .++.+..+|+|||.+++-
T Consensus 203 ~~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~K 253 (320)
T 2hwk_A 203 DVPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSI 253 (320)
T ss_dssp TSCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEE
T ss_pred ccCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEE
Confidence 34779999999642 2223 1 244556999999999984
No 358
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=76.59 E-value=5.8 Score=29.83 Aligned_cols=67 Identities=16% Similarity=0.059 Sum_probs=44.6
Q ss_pred hhcCCCEEEEEecc-ccHHHHHHHhhCCCCC-----c----------------cCC-C----------CceeEEEEcCCc
Q 032292 16 RLVNAKKTIEIGVF-TGYSLLLTALTIPEDG-----Q----------------SEN-E----------GSFDYAFVDADK 62 (143)
Q Consensus 16 ~~~~~~~vLeiG~g-~G~~t~~la~~~~~~~-----~----------------~~~-~----------~~fD~v~~d~~~ 62 (143)
...+.++||-+|+| .|..++.+|+..+..- . ... . +.+|+|+-....
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~ 240 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVS 240 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCC
Confidence 44567899999986 4778888888764310 0 000 0 358888755432
Q ss_pred cchHHHHHHHHhcccCCeEEEEe
Q 032292 63 DNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 63 ~~~~~~~~~~~~~L~~gG~li~d 85 (143)
...++.+.+.|+++|.++.-
T Consensus 241 ---~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 241 ---KPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp ---HHHHHHHHHHEEEEEEEEEC
T ss_pred ---HHHHHHHHHHhhcCCEEEEe
Confidence 34577888999999998763
No 359
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=76.52 E-value=8.9 Score=28.54 Aligned_cols=60 Identities=12% Similarity=0.033 Sum_probs=40.7
Q ss_pred EEEEEec--cccHHHHHHHhhCCCC--------Cc-----------------c-------CCCCceeEEEEcCCccchHH
Q 032292 22 KTIEIGV--FTGYSLLLTALTIPED--------GQ-----------------S-------ENEGSFDYAFVDADKDNYCN 67 (143)
Q Consensus 22 ~vLeiG~--g~G~~t~~la~~~~~~--------~~-----------------~-------~~~~~fD~v~~d~~~~~~~~ 67 (143)
+||-+|+ |.|..++.+|+..+.. .+ . ...+.+|+||-.... .
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g~----~ 228 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGG----K 228 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCT----H
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCcH----H
Confidence 8999996 6677888888775421 00 0 012358988754432 3
Q ss_pred HHHHHHhcccCCeEEEEe
Q 032292 68 YHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 68 ~~~~~~~~L~~gG~li~d 85 (143)
.++.+++.|++||.++.-
T Consensus 229 ~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 229 QLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp HHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHhhcCCCEEEEE
Confidence 577889999999999763
No 360
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=76.36 E-value=2.1 Score=32.53 Aligned_cols=65 Identities=9% Similarity=-0.018 Sum_probs=43.1
Q ss_pred hcCCCEEEEEe--ccccHHHHHHHhhCCCCCc----------------------------------cCCCCceeEEEEcC
Q 032292 17 LVNAKKTIEIG--VFTGYSLLLTALTIPEDGQ----------------------------------SENEGSFDYAFVDA 60 (143)
Q Consensus 17 ~~~~~~vLeiG--~g~G~~t~~la~~~~~~~~----------------------------------~~~~~~fD~v~~d~ 60 (143)
..+.++||-+| .|.|..++.+++..+..-. ......+|+++-.+
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 239 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCI 239 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESS
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECC
Confidence 44678999998 4667778888776542100 01123689988665
Q ss_pred CccchHHHHHHHHhcccCCeEEEEe
Q 032292 61 DKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 61 ~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
... .++.+.+.|+++|.++.-
T Consensus 240 G~~----~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 240 GGS----YWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp CGG----GHHHHHHHEEEEEEEEEC
T ss_pred Cch----HHHHHHHhccCCCEEEEE
Confidence 432 456778999999998863
No 361
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=76.04 E-value=14 Score=28.05 Aligned_cols=81 Identities=16% Similarity=0.115 Sum_probs=50.9
Q ss_pred HHHHHHHHHhh--cCCCEEEEEeccccHHHHHHHhhCCCCC---c-----c--C---CCCceeEEEEcCCccchHHHHHH
Q 032292 7 HGQLMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPEDG---Q-----S--E---NEGSFDYAFVDADKDNYCNYHER 71 (143)
Q Consensus 7 ~~~~l~~l~~~--~~~~~vLeiG~g~G~~t~~la~~~~~~~---~-----~--~---~~~~fD~v~~d~~~~~~~~~~~~ 71 (143)
+-+||..+.+. ..+..|+=+|||.|.....|++..+.-+ + + . ..+..++.++..-. -..++..
T Consensus 46 EIeFLt~~~~~~~~~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~~~~l~~~~NV~li~~fv--de~dl~~ 123 (307)
T 3mag_A 46 ELFFLSKLQRHGILDGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDPILNGLRDVTLVTRFV--DEEYLRS 123 (307)
T ss_dssp HHHHHHHHHHTTCSTTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCCCGGGTTCTTEEEEECCC--CHHHHHH
T ss_pred HHHHHHHHHhcCCCCCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcchhhhcCCCcEEEEeccC--CHHHHHH
Confidence 34667666543 2467999999999999999999876421 1 1 1 11223444443322 1344566
Q ss_pred HHhcccCCeEEEEeccCC
Q 032292 72 LMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 72 ~~~~L~~gG~li~d~~~~ 89 (143)
....++...++.+.|+--
T Consensus 124 l~~~~~~~~iLLISDIRS 141 (307)
T 3mag_A 124 IKKQLHPSKIILISDVRS 141 (307)
T ss_dssp HHHHHTTSCEEEEECCCC
T ss_pred HHHhccCCCEEEEEEecC
Confidence 667777888998888743
No 362
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=75.82 E-value=5.8 Score=30.77 Aligned_cols=29 Identities=17% Similarity=0.017 Sum_probs=25.1
Q ss_pred cCCCEEEEEeccccHHHHHHHhhCCCCCc
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ 46 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~ 46 (143)
.+...+||..+|.|.-|..+++.+++.++
T Consensus 56 ~pggiyVD~TlG~GGHS~~iL~~lg~~Gr 84 (347)
T 3tka_A 56 RPDGIYIDGTFGRGGHSRLILSQLGEEGR 84 (347)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTCCTTCE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHhCCCCCE
Confidence 45679999999999999999999876666
No 363
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=75.78 E-value=4.5 Score=30.35 Aligned_cols=34 Identities=6% Similarity=-0.006 Sum_probs=26.6
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 032292 51 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 51 ~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~ 84 (143)
..+|+|++..........++.+.+.++++.+++.
T Consensus 85 ~~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~ 118 (318)
T 3hwr_A 85 QGADLVLFCVKSTDTQSAALAMKPALAKSALVLS 118 (318)
T ss_dssp TTCSEEEECCCGGGHHHHHHHHTTTSCTTCEEEE
T ss_pred CCCCEEEEEcccccHHHHHHHHHHhcCCCCEEEE
Confidence 4689999876555667788888899999887764
No 364
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=75.73 E-value=8.4 Score=28.65 Aligned_cols=67 Identities=10% Similarity=-0.062 Sum_probs=44.1
Q ss_pred HhhcCCCEEEEEe--ccccHHHHHHHhhCCCCCc--------------------c-CC-C------CceeEEEEcCCccc
Q 032292 15 LRLVNAKKTIEIG--VFTGYSLLLTALTIPEDGQ--------------------S-EN-E------GSFDYAFVDADKDN 64 (143)
Q Consensus 15 ~~~~~~~~vLeiG--~g~G~~t~~la~~~~~~~~--------------------~-~~-~------~~fD~v~~d~~~~~ 64 (143)
+...+.++||-+| .+.|..++.+|+..+..-. . .. + ..+|+||-....
T Consensus 148 ~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g~-- 225 (321)
T 3tqh_A 148 AEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGG-- 225 (321)
T ss_dssp TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESSCH--
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECCCc--
Confidence 4456778999997 4558888888888653100 1 11 1 358988744332
Q ss_pred hHHHHHHHHhcccCCeEEEEe
Q 032292 65 YCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 65 ~~~~~~~~~~~L~~gG~li~d 85 (143)
..++.++++|+++|.++.-
T Consensus 226 --~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 226 --DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp --HHHHHHGGGEEEEEEEEEC
T ss_pred --HHHHHHHHhccCCCEEEEe
Confidence 2237788999999999863
No 365
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=74.98 E-value=3.1 Score=31.45 Aligned_cols=65 Identities=14% Similarity=0.068 Sum_probs=44.0
Q ss_pred hhcCCCEEEEEec--cccHHHHHHHhhCCCCCc-------------------c------------CCCCceeEEEEcCCc
Q 032292 16 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQ-------------------S------------ENEGSFDYAFVDADK 62 (143)
Q Consensus 16 ~~~~~~~vLeiG~--g~G~~t~~la~~~~~~~~-------------------~------------~~~~~fD~v~~d~~~ 62 (143)
...+.++||-+|+ +.|..++.+|+..+..-. . .....+|+||-....
T Consensus 147 ~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~lGa~~i~~~~~~~~~~~~~~~~~g~D~vid~~g~ 226 (343)
T 3gaz_A 147 QVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATARGSDLEYVRDLGATPIDASREPEDYAAEHTAGQGFDLVYDTLGG 226 (343)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTSEEEETTSCHHHHHHHHHTTSCEEEEEESSCT
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHHcCCCEeccCCCHHHHHHHHhcCCCceEEEECCCc
Confidence 3446789999993 568888888887653100 0 012468988754432
Q ss_pred cchHHHHHHHHhcccCCeEEEE
Q 032292 63 DNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 63 ~~~~~~~~~~~~~L~~gG~li~ 84 (143)
..++.+.+.|+++|.++.
T Consensus 227 ----~~~~~~~~~l~~~G~iv~ 244 (343)
T 3gaz_A 227 ----PVLDASFSAVKRFGHVVS 244 (343)
T ss_dssp ----HHHHHHHHHEEEEEEEEE
T ss_pred ----HHHHHHHHHHhcCCeEEE
Confidence 457788899999999886
No 366
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=73.84 E-value=5.5 Score=29.57 Aligned_cols=60 Identities=12% Similarity=0.104 Sum_probs=41.7
Q ss_pred EEEEEec--cccHHHHHHHhhCCCCC--------c----------------c------CCCCceeEEEEcCCccchHHHH
Q 032292 22 KTIEIGV--FTGYSLLLTALTIPEDG--------Q----------------S------ENEGSFDYAFVDADKDNYCNYH 69 (143)
Q Consensus 22 ~vLeiG~--g~G~~t~~la~~~~~~~--------~----------------~------~~~~~fD~v~~d~~~~~~~~~~ 69 (143)
+||-+|+ +.|..++.+|+..+..- + . ...+.+|+|| |+... ..+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~-d~~g~---~~~ 224 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAI-DTVGD---KVL 224 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEE-ESSCH---HHH
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEE-ECCCc---HHH
Confidence 4999996 67889999998875310 0 0 1235689876 43322 268
Q ss_pred HHHHhcccCCeEEEEe
Q 032292 70 ERLMKLLKVGGIAVYD 85 (143)
Q Consensus 70 ~~~~~~L~~gG~li~d 85 (143)
+.+++.|+++|.++.-
T Consensus 225 ~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 225 AKVLAQMNYGGCVAAC 240 (324)
T ss_dssp HHHHHTEEEEEEEEEC
T ss_pred HHHHHHHhcCCEEEEE
Confidence 8889999999999863
No 367
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=72.48 E-value=6.1 Score=29.79 Aligned_cols=63 Identities=17% Similarity=0.169 Sum_probs=42.0
Q ss_pred CCCEEEEEe-c-cccHHHHHHHhhCCCC-----Cc---------------------------cCCCCceeEEEEcCCccc
Q 032292 19 NAKKTIEIG-V-FTGYSLLLTALTIPED-----GQ---------------------------SENEGSFDYAFVDADKDN 64 (143)
Q Consensus 19 ~~~~vLeiG-~-g~G~~t~~la~~~~~~-----~~---------------------------~~~~~~fD~v~~d~~~~~ 64 (143)
+.++||-+| + +.|..++.+|+..+.. .. ....+.+|+||-...
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~g--- 226 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFN--- 226 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESSC---
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECCC---
Confidence 578999994 3 4578888888876531 00 011236898875433
Q ss_pred hHHHHHHHHhcccCCeEEEE
Q 032292 65 YCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 65 ~~~~~~~~~~~L~~gG~li~ 84 (143)
-...++.+.++|+++|.++.
T Consensus 227 ~~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 227 TDMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp HHHHHHHHHHHEEEEEEEEE
T ss_pred chHHHHHHHHHhccCCEEEE
Confidence 24456788899999999975
No 368
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=71.50 E-value=4.7 Score=30.09 Aligned_cols=60 Identities=8% Similarity=0.082 Sum_probs=40.4
Q ss_pred EEEEEec--cccHHHHHHHhhCCCC--------Cc---------------cC---------CCCceeEEEEcCCccchHH
Q 032292 22 KTIEIGV--FTGYSLLLTALTIPED--------GQ---------------SE---------NEGSFDYAFVDADKDNYCN 67 (143)
Q Consensus 22 ~vLeiG~--g~G~~t~~la~~~~~~--------~~---------------~~---------~~~~fD~v~~d~~~~~~~~ 67 (143)
+||-+|+ |.|..++.+|+..+.. .+ .. ..+.+|+||-.... .
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~----~ 227 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGG----R 227 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTT----T
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCcH----H
Confidence 8999997 6788888888876531 00 00 01358887744332 2
Q ss_pred HHHHHHhcccCCeEEEEe
Q 032292 68 YHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 68 ~~~~~~~~L~~gG~li~d 85 (143)
.++.+.+.|+++|.++.-
T Consensus 228 ~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 228 TLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp THHHHHHTEEEEEEEEEC
T ss_pred HHHHHHHhhccCCEEEEE
Confidence 466788999999999863
No 369
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=70.33 E-value=12 Score=28.05 Aligned_cols=66 Identities=12% Similarity=-0.019 Sum_probs=44.8
Q ss_pred hhcCCCEEEEEeccc-cHHHHHHHhhC--CCCC-----c------------------cC---------CCCceeEEEEcC
Q 032292 16 RLVNAKKTIEIGVFT-GYSLLLTALTI--PEDG-----Q------------------SE---------NEGSFDYAFVDA 60 (143)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~t~~la~~~--~~~~-----~------------------~~---------~~~~fD~v~~d~ 60 (143)
.. +.++||-+|+|. |..++.+|+.. +..- . .. ....+|+||-..
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~ 246 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLV 246 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECC
Confidence 45 778999999864 77888888876 4210 0 00 012689988544
Q ss_pred CccchHHHHHHHHhcccCCeEEEEe
Q 032292 61 DKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 61 ~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
.. ...++.+.+.|+++|.++.-
T Consensus 247 g~---~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 247 GT---EETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp CC---HHHHHHHHHHEEEEEEEEEC
T ss_pred CC---hHHHHHHHHHhhcCCEEEEe
Confidence 32 34577888999999998763
No 370
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=70.21 E-value=4 Score=29.74 Aligned_cols=32 Identities=9% Similarity=0.141 Sum_probs=22.9
Q ss_pred HHHHHHHhh--cCCCEEEEEeccccHHHHHHHhh
Q 032292 9 QLMAMLLRL--VNAKKTIEIGVFTGYSLLLTALT 40 (143)
Q Consensus 9 ~~l~~l~~~--~~~~~vLeiG~g~G~~t~~la~~ 40 (143)
+++..++.. .+...|||..||+|..++...+.
T Consensus 200 ~l~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~ 233 (260)
T 1g60_A 200 DLIERIIRASSNPNDLVLDCFMGSGTTAIVAKKL 233 (260)
T ss_dssp HHHHHHHHHHCCTTCEEEESSCTTCHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc
Confidence 344444443 35689999999999999986553
No 371
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=69.67 E-value=8.9 Score=29.98 Aligned_cols=67 Identities=10% Similarity=-0.051 Sum_probs=45.0
Q ss_pred HhhcCCCEEEEEec--cccHHHHHHHhhCCCCCc-------------------------cCC------------------
Q 032292 15 LRLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQ-------------------------SEN------------------ 49 (143)
Q Consensus 15 ~~~~~~~~vLeiG~--g~G~~t~~la~~~~~~~~-------------------------~~~------------------ 49 (143)
+...+.++||-+|+ |.|..++.+|+..+..-. ...
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKL 295 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHH
Confidence 34456789999996 567888888887653100 000
Q ss_pred --------CCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 032292 50 --------EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 50 --------~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
...+|+||-.... ..++.+.++|++||.++.-
T Consensus 296 ~~~v~~~~g~g~Dvvid~~G~----~~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 296 AKLVVEKAGREPDIVFEHTGR----VTFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHSSCCSEEEECSCH----HHHHHHHHHSCTTCEEEES
T ss_pred HHHHHHHhCCCceEEEECCCc----hHHHHHHHHHhcCCEEEEE
Confidence 1358888754432 3577888999999999863
No 372
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=69.02 E-value=4.2 Score=30.87 Aligned_cols=69 Identities=23% Similarity=0.118 Sum_probs=43.5
Q ss_pred hhcCCCEEEEEeccc-cHHHHHHHhhCCCC--------Cc--------------c-CC-------CCceeEEEEcCCccc
Q 032292 16 RLVNAKKTIEIGVFT-GYSLLLTALTIPED--------GQ--------------S-EN-------EGSFDYAFVDADKDN 64 (143)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~t~~la~~~~~~--------~~--------------~-~~-------~~~fD~v~~d~~~~~ 64 (143)
...+.++||-+|+|. |..++.+|+..+.. .+ . .. .+.+|+||-.....
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~- 254 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSL- 254 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCS-
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCCC-
Confidence 455678999999753 77888888875421 01 0 01 13689988554330
Q ss_pred hHHHHHHHHhcccCCeEEEEe
Q 032292 65 YCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 65 ~~~~~~~~~~~L~~gG~li~d 85 (143)
....++.+.+.|++||.++.-
T Consensus 255 ~~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 255 TDIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp TTCCTTTGGGGEEEEEEEEEC
T ss_pred cHHHHHHHHHHhcCCCEEEEe
Confidence 012345677999999998763
No 373
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=68.76 E-value=3.1 Score=31.50 Aligned_cols=65 Identities=15% Similarity=0.074 Sum_probs=39.5
Q ss_pred hhcCCCEEEEEec--cccHHHHHHHhhCCCCCc--------------------------------cCCCCceeEEEEcCC
Q 032292 16 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQ--------------------------------SENEGSFDYAFVDAD 61 (143)
Q Consensus 16 ~~~~~~~vLeiG~--g~G~~t~~la~~~~~~~~--------------------------------~~~~~~fD~v~~d~~ 61 (143)
...+.++||-.|+ +.|..++.+|+.... .+ ....+.+|+||-...
T Consensus 139 ~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~-~~V~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~g~Dvv~d~~g 217 (349)
T 4a27_A 139 NLREGMSVLVHSAGGGVGQAVAQLCSTVPN-VTVFGTASTFKHEAIKDSVTHLFDRNADYVQEVKRISAEGVDIVLDCLC 217 (349)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHTTSTT-CEEEEEECGGGHHHHGGGSSEEEETTSCHHHHHHHHCTTCEEEEEEECC
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-cEEEEeCCHHHHHHHHcCCcEEEcCCccHHHHHHHhcCCCceEEEECCC
Confidence 3456789999997 457788888877632 11 011246888874433
Q ss_pred ccchHHHHHHHHhcccCCeEEEEe
Q 032292 62 KDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 62 ~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
.. .++.++++|+++|.++.-
T Consensus 218 ~~----~~~~~~~~l~~~G~~v~~ 237 (349)
T 4a27_A 218 GD----NTGKGLSLLKPLGTYILY 237 (349)
T ss_dssp -----------CTTEEEEEEEEEE
T ss_pred ch----hHHHHHHHhhcCCEEEEE
Confidence 22 236778999999999753
No 374
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=68.33 E-value=7.2 Score=30.73 Aligned_cols=66 Identities=12% Similarity=0.047 Sum_probs=45.0
Q ss_pred hhcCCCEEEEEec--cccHHHHHHHhhCCCCCc----------------------c-C----------------------
Q 032292 16 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQ----------------------S-E---------------------- 48 (143)
Q Consensus 16 ~~~~~~~vLeiG~--g~G~~t~~la~~~~~~~~----------------------~-~---------------------- 48 (143)
...+.++||-+|+ +.|..++.+|+..+..-. . .
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~ 304 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGK 304 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHH
Confidence 3456789999997 567888888888653100 0 0
Q ss_pred ------CCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 032292 49 ------NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 49 ------~~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
....+|+||-... . ..++.++++|++||.++.-
T Consensus 305 ~i~~~t~g~g~Dvvid~~G-~---~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 305 RIRELTGGEDIDIVFEHPG-R---ETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHTSCCEEEEEECSC-H---HHHHHHHHHEEEEEEEEES
T ss_pred HHHHHhCCCCCcEEEEcCC-c---hhHHHHHHHhhCCcEEEEE
Confidence 0136898874433 1 4677888999999999863
No 375
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=67.82 E-value=8.9 Score=28.79 Aligned_cols=64 Identities=11% Similarity=-0.036 Sum_probs=42.1
Q ss_pred CCCEEEEEeccc-cHHHHHHHhhCCC-CCc------------cC-------C-------------CCceeEEEEcCCccc
Q 032292 19 NAKKTIEIGVFT-GYSLLLTALTIPE-DGQ------------SE-------N-------------EGSFDYAFVDADKDN 64 (143)
Q Consensus 19 ~~~~vLeiG~g~-G~~t~~la~~~~~-~~~------------~~-------~-------------~~~fD~v~~d~~~~~ 64 (143)
+.++||-+|+|. |..++.+|+..+. .-. .. . ...+|+||-....
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~la~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~-- 241 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGN-- 241 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTTCSEEECTTTSCHHHHHHHHHSSCEEEEEECSCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhHHhccCcCccCHHHHHHHhcCCCCCEEEECCCC--
Confidence 678999999753 7788888887653 100 00 0 1247777744322
Q ss_pred hHHHHHHHHhcccCCeEEEEe
Q 032292 65 YCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 65 ~~~~~~~~~~~L~~gG~li~d 85 (143)
...++.+.+.|+++|.++.-
T Consensus 242 -~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 242 -EAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp -HHHHHHHHHHEEEEEEEEEC
T ss_pred -HHHHHHHHHHHhcCCEEEEE
Confidence 34577888999999998763
No 376
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=66.48 E-value=7.1 Score=31.61 Aligned_cols=68 Identities=18% Similarity=0.181 Sum_probs=44.8
Q ss_pred hhcCCCEEEEEeccccHHHHHHHhhCCCCCc-------------------------------cCCCCceeEEEEcCCccc
Q 032292 16 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQ-------------------------------SENEGSFDYAFVDADKDN 64 (143)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~-------------------------------~~~~~~fD~v~~d~~~~~ 64 (143)
...+.++|.-||+|+ -+..-|..++++|. ...-..-|+|.+-..-..
T Consensus 33 ~~lkgK~IaVIGyGs--QG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v~~~~eA~~~ADvV~~L~PD~~ 110 (491)
T 3ulk_A 33 SYLQGKKVVIVGCGA--QGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQ 110 (491)
T ss_dssp GGGTTSEEEEESCSH--HHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEEEEHHHHGGGCSEEEECSCGGG
T ss_pred HHHcCCEEEEeCCCh--HhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEecCHHHHHHhCCEEEEeCChhh
Confidence 445789999999964 34434444443332 111245688877554445
Q ss_pred hHHHHHHHHhcccCCeEEEEe
Q 032292 65 YCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 65 ~~~~~~~~~~~L~~gG~li~d 85 (143)
....++.+.++|++|-.|.|.
T Consensus 111 q~~vy~~I~p~lk~G~~L~fa 131 (491)
T 3ulk_A 111 HSDVVRTVQPLMKDGAALGYS 131 (491)
T ss_dssp HHHHHHHHGGGSCTTCEEEES
T ss_pred HHHHHHHHHhhCCCCCEEEec
Confidence 566778899999999999875
No 377
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=65.72 E-value=4.7 Score=27.06 Aligned_cols=38 Identities=11% Similarity=0.043 Sum_probs=28.4
Q ss_pred cCCCCceeEEEEcCCcc----c-hHHHHHHHHhcccCCeEEEE
Q 032292 47 SENEGSFDYAFVDADKD----N-YCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 47 ~~~~~~fD~v~~d~~~~----~-~~~~~~~~~~~L~~gG~li~ 84 (143)
......||.|++-.+.. . ....+..+.+.|+|||.+-.
T Consensus 54 sLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 54 TLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred cCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 45678899998743222 2 26789999999999999964
No 378
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=64.92 E-value=8.6 Score=32.87 Aligned_cols=65 Identities=11% Similarity=0.140 Sum_probs=44.4
Q ss_pred hhcCCCEEEEEec--cccHHHHHHHhhCCCCC-------c-------------------------cCCCCceeEEEEcCC
Q 032292 16 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDG-------Q-------------------------SENEGSFDYAFVDAD 61 (143)
Q Consensus 16 ~~~~~~~vLeiG~--g~G~~t~~la~~~~~~~-------~-------------------------~~~~~~fD~v~~d~~ 61 (143)
+..+.++||-.|+ |.|..++.+|+..+..- + ......+|+||-...
T Consensus 342 ~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~k~~~l~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~g 421 (795)
T 3slk_A 342 GLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKWQAVELSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLA 421 (795)
T ss_dssp CCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGGGGGGSCSCGGGEECSSSSTHHHHHHHHSCSSCCSEEEECCC
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChHHhhhhhcChhheeecCChhHHHHHHHHcCCCCeEEEEECCC
Confidence 3456789999994 67889999999875310 0 011235888885433
Q ss_pred ccchHHHHHHHHhcccCCeEEEE
Q 032292 62 KDNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 62 ~~~~~~~~~~~~~~L~~gG~li~ 84 (143)
. +.++..+++|+++|.++.
T Consensus 422 g----~~~~~~l~~l~~~Gr~v~ 440 (795)
T 3slk_A 422 G----EFADASLRMLPRGGRFLE 440 (795)
T ss_dssp T----TTTHHHHTSCTTCEEEEE
T ss_pred c----HHHHHHHHHhcCCCEEEE
Confidence 2 235678899999999986
No 379
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=63.84 E-value=15 Score=28.06 Aligned_cols=66 Identities=14% Similarity=0.093 Sum_probs=43.1
Q ss_pred hcCCCEEEEEecc-ccHHHHHHHhhCCC-CCc---------------------cCC----------------CCceeEEE
Q 032292 17 LVNAKKTIEIGVF-TGYSLLLTALTIPE-DGQ---------------------SEN----------------EGSFDYAF 57 (143)
Q Consensus 17 ~~~~~~vLeiG~g-~G~~t~~la~~~~~-~~~---------------------~~~----------------~~~fD~v~ 57 (143)
..+.++||-+|+| .|..++.+|+..+. .-. ... ...+|+||
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvi 272 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFIL 272 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEE
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEE
Confidence 4456899999966 37788888887752 100 000 12589888
Q ss_pred EcCCccchHHHHHHHHhcccCCeEEEEe
Q 032292 58 VDADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 58 ~d~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
-.... ...++.+++.|+++|.++.-
T Consensus 273 d~~g~---~~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 273 EATGD---SRALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp ECSSC---TTHHHHHHHHEEEEEEEEEC
T ss_pred ECCCC---HHHHHHHHHHHhcCCEEEEE
Confidence 54432 23466788999999998763
No 380
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=63.70 E-value=13 Score=24.44 Aligned_cols=66 Identities=8% Similarity=-0.056 Sum_probs=36.3
Q ss_pred hcCCCEEEEEeccc--cHHHHHHHhhCCCCC----------c-----------cCCCCceeEEEEcCCccchHHHHHHHH
Q 032292 17 LVNAKKTIEIGVFT--GYSLLLTALTIPEDG----------Q-----------SENEGSFDYAFVDADKDNYCNYHERLM 73 (143)
Q Consensus 17 ~~~~~~vLeiG~g~--G~~t~~la~~~~~~~----------~-----------~~~~~~fD~v~~d~~~~~~~~~~~~~~ 73 (143)
+.+|++|.-||.+. |..+..+++.+...+ . ....+..|++++.-......+.++++.
T Consensus 11 l~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i~G~~~~~s~~el~~~vDlvii~vp~~~v~~v~~~~~ 90 (138)
T 1y81_A 11 SKEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVPPKVGLQVAKEAV 90 (138)
T ss_dssp ---CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEECSCHHHHHHHHHHHH
T ss_pred ccCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeECCeeecCCHHHhCCCCCEEEEEeCHHHHHHHHHHHH
Confidence 45789999999843 444434433321111 1 223457899998766445556666665
Q ss_pred hcccCCeEEE
Q 032292 74 KLLKVGGIAV 83 (143)
Q Consensus 74 ~~L~~gG~li 83 (143)
+ +..+++++
T Consensus 91 ~-~g~~~i~~ 99 (138)
T 1y81_A 91 E-AGFKKLWF 99 (138)
T ss_dssp H-TTCCEEEE
T ss_pred H-cCCCEEEE
Confidence 5 45566554
No 381
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=63.52 E-value=5.3 Score=30.11 Aligned_cols=30 Identities=3% Similarity=-0.160 Sum_probs=23.6
Q ss_pred HHHHHHhhcCCCEEEEEeccccHHHHHHHhh
Q 032292 10 LMAMLLRLVNAKKTIEIGVFTGYSLLLTALT 40 (143)
Q Consensus 10 ~l~~l~~~~~~~~vLeiG~g~G~~t~~la~~ 40 (143)
++..| ...+...+||.+||.|.-|..+++.
T Consensus 14 ~le~L-~~~~gg~~VD~T~G~GGHS~~il~~ 43 (285)
T 1wg8_A 14 ALDLL-AVRPGGVYVDATLGGAGHARGILER 43 (285)
T ss_dssp HHHHH-TCCTTCEEEETTCTTSHHHHHHHHT
T ss_pred HHHhh-CCCCCCEEEEeCCCCcHHHHHHHHC
Confidence 34444 3446689999999999999999987
No 382
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=63.35 E-value=9.6 Score=27.57 Aligned_cols=33 Identities=15% Similarity=0.080 Sum_probs=24.5
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcccCCeEEE
Q 032292 51 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAV 83 (143)
Q Consensus 51 ~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li 83 (143)
...|+|++..........++.+.+.++++.+++
T Consensus 56 ~~~D~vi~av~~~~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 56 QTAKIIFLCTPIQLILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp TTCSEEEECSCHHHHHHHHHHHGGGSCTTCEEE
T ss_pred CCCCEEEEECCHHHHHHHHHHHHhhCCCCCEEE
Confidence 468999987755445667777888888887664
No 383
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=63.03 E-value=15 Score=27.72 Aligned_cols=27 Identities=15% Similarity=0.160 Sum_probs=20.9
Q ss_pred hhcCCCEEEEEec--cccHHHHHHHhhCC
Q 032292 16 RLVNAKKTIEIGV--FTGYSLLLTALTIP 42 (143)
Q Consensus 16 ~~~~~~~vLeiG~--g~G~~t~~la~~~~ 42 (143)
...+.++||-+|+ +.|..++.+|+..+
T Consensus 164 ~~~~g~~VlV~Ga~G~vG~~aiqlak~~G 192 (357)
T 1zsy_A 164 QLQPGDSVIQNASNSGVGQAVIQIAAALG 192 (357)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHT
T ss_pred ccCCCCEEEEeCCcCHHHHHHHHHHHHcC
Confidence 4456789999996 67888888888754
No 384
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=62.52 E-value=7.6 Score=28.79 Aligned_cols=61 Identities=21% Similarity=0.110 Sum_probs=40.7
Q ss_pred CEEEEEe-ccccHHHHHHHhhCCCCCc------cC-------CCCceeEEEEcCCccchHHHHHHHHhcccCCeEEE
Q 032292 21 KKTIEIG-VFTGYSLLLTALTIPEDGQ------SE-------NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAV 83 (143)
Q Consensus 21 ~~vLeiG-~g~G~~t~~la~~~~~~~~------~~-------~~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li 83 (143)
++|.-|| + |..+..+|..+...+. +. .-...|+|++..........++.+.+.++++.+++
T Consensus 22 ~~I~iIGg~--G~mG~~la~~l~~~G~~V~~~~~~~~~~~~~~~~~aDvVilavp~~~~~~vl~~l~~~l~~~~iv~ 96 (298)
T 2pv7_A 22 HKIVIVGGY--GKLGGLFARYLRASGYPISILDREDWAVAESILANADVVIVSVPINLTLETIERLKPYLTENMLLA 96 (298)
T ss_dssp CCEEEETTT--SHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEE
T ss_pred CEEEEEcCC--CHHHHHHHHHHHhCCCeEEEEECCcccCHHHHhcCCCEEEEeCCHHHHHHHHHHHHhhcCCCcEEE
Confidence 4788887 6 5666666666543222 11 12467999998766666778888888898887554
No 385
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=61.71 E-value=7.5 Score=31.01 Aligned_cols=40 Identities=18% Similarity=0.169 Sum_probs=26.4
Q ss_pred cChHHHHHHHHHH----hhcCCCEEEEEeccccHHHHHHHhhCC
Q 032292 3 LLTIHGQLMAMLL----RLVNAKKTIEIGVFTGYSLLLTALTIP 42 (143)
Q Consensus 3 ~~~~~~~~l~~l~----~~~~~~~vLeiG~g~G~~t~~la~~~~ 42 (143)
+++.-|++|...+ ....+-+|+|+|.|.|..+.-+.+.+.
T Consensus 117 iS~~FGe~la~~~~~~~~~~g~~~ivE~GaG~GtLa~DiL~~l~ 160 (432)
T 4f3n_A 117 LSPLFAQTLARPVAQALDASGTRRVMEFGAGTGKLAAGLLTALA 160 (432)
T ss_dssp GHHHHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHhcCCCeEEEeCCCccHHHHHHHHHHH
Confidence 3444455444333 223467999999999999888876653
No 386
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=60.85 E-value=11 Score=28.91 Aligned_cols=63 Identities=13% Similarity=0.088 Sum_probs=39.8
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCCCCc---------------------c--C------CCCceeEEEEcCCccchHHHH
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------S--E------NEGSFDYAFVDADKDNYCNYH 69 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------~--~------~~~~fD~v~~d~~~~~~~~~~ 69 (143)
+..+|.-||+ |..+..||..+...+. . . .....|+|++..........+
T Consensus 21 ~~mkIgiIGl--G~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~~v~~vl 98 (358)
T 4e21_A 21 QSMQIGMIGL--GRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAAVVDSML 98 (358)
T ss_dssp -CCEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGGGHHHHH
T ss_pred cCCEEEEECc--hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHHHHHHHH
Confidence 4568888987 5777776665432222 0 0 012349999876544556677
Q ss_pred HHHHhcccCCeEEE
Q 032292 70 ERLMKLLKVGGIAV 83 (143)
Q Consensus 70 ~~~~~~L~~gG~li 83 (143)
+.+.+.|++|.+|+
T Consensus 99 ~~l~~~l~~g~iiI 112 (358)
T 4e21_A 99 QRMTPLLAANDIVI 112 (358)
T ss_dssp HHHGGGCCTTCEEE
T ss_pred HHHHhhCCCCCEEE
Confidence 88888898887665
No 387
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=60.17 E-value=15 Score=27.86 Aligned_cols=63 Identities=17% Similarity=0.081 Sum_probs=39.6
Q ss_pred CCCEEEEEeccc-cHHHHHHHhhCCCCC--------c----c------------------CCCCceeEEEEcCCccchHH
Q 032292 19 NAKKTIEIGVFT-GYSLLLTALTIPEDG--------Q----S------------------ENEGSFDYAFVDADKDNYCN 67 (143)
Q Consensus 19 ~~~~vLeiG~g~-G~~t~~la~~~~~~~--------~----~------------------~~~~~fD~v~~d~~~~~~~~ 67 (143)
+.++||-+|+|. |..++.+|+..+..- + . ...+.+|+||-......
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~~--- 263 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVH--- 263 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSCC---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcHH---
Confidence 668999999753 667777777764210 0 0 01135888875543221
Q ss_pred HHHHHHhcccCCeEEEE
Q 032292 68 YHERLMKLLKVGGIAVY 84 (143)
Q Consensus 68 ~~~~~~~~L~~gG~li~ 84 (143)
.++.+++.|+++|.++.
T Consensus 264 ~~~~~~~~l~~~G~iv~ 280 (366)
T 1yqd_A 264 PLLPLFGLLKSHGKLIL 280 (366)
T ss_dssp CSHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHhcCCEEEE
Confidence 23466788999999875
No 388
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=59.89 E-value=3.8 Score=31.88 Aligned_cols=68 Identities=10% Similarity=0.173 Sum_probs=46.2
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCC----CCc-------------------cCCCCceeEEEEcCCccc----hHHHHHH
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPE----DGQ-------------------SENEGSFDYAFVDADKDN----YCNYHER 71 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~----~~~-------------------~~~~~~fD~v~~d~~~~~----~~~~~~~ 71 (143)
...+||.++-+.|..+++++..... +.+ ......||+|++.-.+.. ....+.+
T Consensus 45 ~~~~~l~~n~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~v~~~~Pk~k~~~~~~~~l~~ 124 (381)
T 3dmg_A 45 FGERALDLNPGVGWGSLPLEGRMAVERLETSRAAFRCLTASGLQARLALPWEAAAGAYDLVVLALPAGRGTAYVQASLVA 124 (381)
T ss_dssp CSSEEEESSCTTSTTTGGGBTTBEEEEEECBHHHHHHHHHTTCCCEECCGGGSCTTCEEEEEEECCGGGCHHHHHHHHHH
T ss_pred hCCcEEEecCCCCccccccCCCCceEEEeCcHHHHHHHHHcCCCccccCCccCCcCCCCEEEEECCcchhHHHHHHHHHH
Confidence 3479999999999888887622111 111 123567999998876532 2345667
Q ss_pred HHhcccCCeEEEEec
Q 032292 72 LMKLLKVGGIAVYDN 86 (143)
Q Consensus 72 ~~~~L~~gG~li~d~ 86 (143)
+.+.|++||.|++..
T Consensus 125 ~~~~l~~g~~i~~~g 139 (381)
T 3dmg_A 125 AARALRMGGRLYLAG 139 (381)
T ss_dssp HHHHEEEEEEEEEEE
T ss_pred HHHhCCCCCEEEEEE
Confidence 789999999987654
No 389
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=59.04 E-value=14 Score=27.65 Aligned_cols=32 Identities=13% Similarity=0.240 Sum_probs=25.0
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcccCCeEEE
Q 032292 52 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAV 83 (143)
Q Consensus 52 ~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li 83 (143)
..|+|++..........++.+.+.+++|.+++
T Consensus 94 ~aDvVilavp~~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 94 SPDFVMLSSPVRTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHHSCTTCEEE
T ss_pred cCCEEEEeCCHHHHHHHHHHHhhccCCCcEEE
Confidence 57999987765566778888889999887664
No 390
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=58.49 E-value=12 Score=26.09 Aligned_cols=62 Identities=13% Similarity=0.097 Sum_probs=36.7
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCCCCc--------cCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEE
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQ--------SENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAV 83 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~~~~--------~~~~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li 83 (143)
...+|.-||+ |..+..+|..+...+. +..-...|+|++..........++.+.+.++ +.+++
T Consensus 18 ~~~~I~iiG~--G~mG~~la~~l~~~g~~V~~~~~~~~~~~~aD~vi~av~~~~~~~v~~~l~~~~~-~~~vi 87 (209)
T 2raf_A 18 QGMEITIFGK--GNMGQAIGHNFEIAGHEVTYYGSKDQATTLGEIVIMAVPYPALAALAKQYATQLK-GKIVV 87 (209)
T ss_dssp --CEEEEECC--SHHHHHHHHHHHHTTCEEEEECTTCCCSSCCSEEEECSCHHHHHHHHHHTHHHHT-TSEEE
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHCCCEEEEEcCCHHHhccCCEEEEcCCcHHHHHHHHHHHHhcC-CCEEE
Confidence 4568889987 5666666655432222 1123568999987653344556666667777 55554
No 391
>3g2e_A OORC subunit of 2-oxoglutarate:acceptor oxidoredu; structural genomics, PSI-2, protein structure initiative; 2.00A {Campylobacter jejuni}
Probab=56.64 E-value=13 Score=25.95 Aligned_cols=33 Identities=27% Similarity=0.344 Sum_probs=23.1
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcccCCeEEEEeccC
Q 032292 51 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 51 ~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
+..|++++-- ...+....+.|+|||+++++...
T Consensus 69 g~~D~lv~~d-----~~~~~~~~~~l~~gg~vi~ns~~ 101 (194)
T 3g2e_A 69 GEVDFMLSTA-----DKGYKGFRGGVKEGGIIVVEPNL 101 (194)
T ss_dssp TCEEEEEECC-----HHHHHHHGGGEEEEEEEEECTTT
T ss_pred CCCCEEEEcC-----HHHHHHHHhccCCCeEEEEeCCC
Confidence 3788887632 22345667899999999998543
No 392
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=56.36 E-value=4.1 Score=26.06 Aligned_cols=58 Identities=14% Similarity=0.112 Sum_probs=34.3
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCCCCc----------------cCCCCceeEEEEcCCccchHHHHHHHHhcccCCe
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQ----------------SENEGSFDYAFVDADKDNYCNYHERLMKLLKVGG 80 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~~~~----------------~~~~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG 80 (143)
+..+||=+ |+.|.||-.|++.+.+.+. ....+.||+|++.-...... +++.....+.|
T Consensus 5 ~~mkIlL~-C~aGmSTsllv~km~~~a~~~gi~v~i~a~~~~~~~~~~~~~DvvLLgPQV~y~~---~~ik~~~~~~~ 78 (108)
T 3nbm_A 5 KELKVLVL-CAGSGTSAQLANAINEGANLTEVRVIANSGAYGAHYDIMGVYDLIILAPQVRSYY---REMKVDAERLG 78 (108)
T ss_dssp CCEEEEEE-ESSSSHHHHHHHHHHHHHHHHTCSEEEEEEETTSCTTTGGGCSEEEECGGGGGGH---HHHHHHHTTTT
T ss_pred cCceEEEE-CCCCCCHHHHHHHHHHHHHHCCCceEEEEcchHHHHhhccCCCEEEEChHHHHHH---HHHHHHhhhcC
Confidence 45567755 8888888888887653111 12235699999865444333 34444444544
No 393
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=55.52 E-value=13 Score=29.21 Aligned_cols=40 Identities=18% Similarity=0.219 Sum_probs=26.5
Q ss_pred cChHHHHHHHHHHh-----hcCC--CEEEEEeccccHHHHHHHhhCC
Q 032292 3 LLTIHGQLMAMLLR-----LVNA--KKTIEIGVFTGYSLLLTALTIP 42 (143)
Q Consensus 3 ~~~~~~~~l~~l~~-----~~~~--~~vLeiG~g~G~~t~~la~~~~ 42 (143)
+++.-|++|...+. ...| -.|+|+|.|.|..+.-+.+.+.
T Consensus 57 is~~FGe~la~~~~~~w~~~g~p~~~~ivElGaG~GtLa~diL~~l~ 103 (387)
T 1zkd_A 57 ISQMFGELLGLWSASVWKAADEPQTLRLIEIGPGRGTMMADALRALR 103 (387)
T ss_dssp HCHHHHHHHHHHHHHHHHHTTCCSSEEEEEECCTTSHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEECCCcchHHHHHHHHHH
Confidence 34555665554432 2223 4799999999999888876653
No 394
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=55.07 E-value=13 Score=28.33 Aligned_cols=66 Identities=11% Similarity=0.022 Sum_probs=42.1
Q ss_pred hcCCCEEEEEe--ccccHHHHHHHhhCCCCC-------c-------------c--C--------CCCceeEEEEcCCccc
Q 032292 17 LVNAKKTIEIG--VFTGYSLLLTALTIPEDG-------Q-------------S--E--------NEGSFDYAFVDADKDN 64 (143)
Q Consensus 17 ~~~~~~vLeiG--~g~G~~t~~la~~~~~~~-------~-------------~--~--------~~~~fD~v~~d~~~~~ 64 (143)
..+.++||-+| .+.|..++.+|+..+..- + . . ....+|+||-.... .
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~-~ 259 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGG-S 259 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCT-T
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCC-h
Confidence 44568999999 456778888888764210 0 0 0 01358888754432 2
Q ss_pred hHHHHHHHHhcccCCeEEEE
Q 032292 65 YCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 65 ~~~~~~~~~~~L~~gG~li~ 84 (143)
...++..++.|++||.++.
T Consensus 260 -~~~~~~~~~~l~~~G~iv~ 278 (375)
T 2vn8_A 260 -TETWAPDFLKKWSGATYVT 278 (375)
T ss_dssp -HHHHGGGGBCSSSCCEEEE
T ss_pred -hhhhHHHHHhhcCCcEEEE
Confidence 2345677899999999876
No 395
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=52.69 E-value=22 Score=26.82 Aligned_cols=64 Identities=19% Similarity=0.149 Sum_probs=39.7
Q ss_pred CCCEEEEEeccc-cHHHHHHHhhCCCC--------Cc----c------------------CCCCceeEEEEcCCccchHH
Q 032292 19 NAKKTIEIGVFT-GYSLLLTALTIPED--------GQ----S------------------ENEGSFDYAFVDADKDNYCN 67 (143)
Q Consensus 19 ~~~~vLeiG~g~-G~~t~~la~~~~~~--------~~----~------------------~~~~~fD~v~~d~~~~~~~~ 67 (143)
+.++||-+|+|. |..++.+|+..+.. .+ . ...+.+|+||-......
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~~~--- 256 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHH--- 256 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCSCC---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCChH---
Confidence 678999999763 66777777765421 00 0 01135888875443221
Q ss_pred HHHHHHhcccCCeEEEEe
Q 032292 68 YHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 68 ~~~~~~~~L~~gG~li~d 85 (143)
.++.+.+.|+++|.++.-
T Consensus 257 ~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 257 ALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp CSHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHhccCCEEEEe
Confidence 245667899999998763
No 396
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=52.05 E-value=11 Score=24.96 Aligned_cols=64 Identities=5% Similarity=-0.008 Sum_probs=37.2
Q ss_pred CCCEEEEEeccc--cHHHHHHHhhCC----------CCC--c-----------cCCCCceeEEEEcCCccchHHHHHHHH
Q 032292 19 NAKKTIEIGVFT--GYSLLLTALTIP----------EDG--Q-----------SENEGSFDYAFVDADKDNYCNYHERLM 73 (143)
Q Consensus 19 ~~~~vLeiG~g~--G~~t~~la~~~~----------~~~--~-----------~~~~~~fD~v~~d~~~~~~~~~~~~~~ 73 (143)
+|++|.-||++. |..+..+++.+. +.. . ....+..|++++........+.++++.
T Consensus 12 ~p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i~G~~~~~sl~el~~~~Dlvii~vp~~~v~~v~~~~~ 91 (145)
T 2duw_A 12 STRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQQGYATLADVPEKVDMVDVFRNSEAAWGVAQEAI 91 (145)
T ss_dssp HCCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEETTEECCSSTTTCSSCCSEEECCSCSTHHHHHHHHHH
T ss_pred CCCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccccCCeeccCCHHHcCCCCCEEEEEeCHHHHHHHHHHHH
Confidence 488999999964 443333333321 111 1 123457899998765555566677666
Q ss_pred hcccCCeEEE
Q 032292 74 KLLKVGGIAV 83 (143)
Q Consensus 74 ~~L~~gG~li 83 (143)
+ ...+++++
T Consensus 92 ~-~g~~~i~i 100 (145)
T 2duw_A 92 A-IGAKTLWL 100 (145)
T ss_dssp H-HTCCEEEC
T ss_pred H-cCCCEEEE
Confidence 6 45666554
No 397
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=51.21 E-value=82 Score=24.27 Aligned_cols=80 Identities=16% Similarity=0.104 Sum_probs=48.3
Q ss_pred HHHHHHHHHhh--cCCCEEEEEeccccHHHHHHHhhCCCC---Cc-------c---CCCCceeEEEEcCCccchHHHHHH
Q 032292 7 HGQLMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPED---GQ-------S---ENEGSFDYAFVDADKDNYCNYHER 71 (143)
Q Consensus 7 ~~~~l~~l~~~--~~~~~vLeiG~g~G~~t~~la~~~~~~---~~-------~---~~~~~fD~v~~d~~~~~~~~~~~~ 71 (143)
+-+||..+... .++..|+=+|++.|+....|++.+++- -+ + ...+--++-++..-.. ..+++.
T Consensus 61 EIeFLs~~~~~~~~~g~~VVYaGsAPG~HI~fL~~lF~~l~~~lkwvLiDp~~f~~~Le~~~ni~li~~ffd--e~~i~~ 138 (348)
T 1vpt_A 61 ELFFLSKLQRHGILDGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDPILNGLRDVTLVTRFVD--EEYLRS 138 (348)
T ss_dssp HHHHHHHHHHTTCSTTCEEEEESCSSCHHHHHHHHHHHHTTCCCEEEEEESSCCCGGGTTCTTEEEEECCCC--HHHHHH
T ss_pred HHHHHHHHHhhccCCCCeEEEeCcCCcchHHHHHHHhhhcCCceEEEEECCCchhhhhcCCCcEEeehhhcC--HHHHHH
Confidence 34677766531 235699999999999999999876631 11 0 0011112222222111 335666
Q ss_pred HHhcccCCeEEEEeccC
Q 032292 72 LMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 72 ~~~~L~~gG~li~d~~~ 88 (143)
+...+....+|.+.|+-
T Consensus 139 l~~~~~~~~vLfISDIR 155 (348)
T 1vpt_A 139 IKKQLHPSKIILISDVA 155 (348)
T ss_dssp HHHHHTTSCEEEEECCC
T ss_pred HHHHhcCCCEEEEEecc
Confidence 77788888999998874
No 398
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=42.37 E-value=23 Score=26.06 Aligned_cols=62 Identities=18% Similarity=0.056 Sum_probs=39.3
Q ss_pred CCEEEEEeccccHHHHHHHhhCCCCCc--------------------------cCCCCceeEEEEcCCcc-chHHHHHHH
Q 032292 20 AKKTIEIGVFTGYSLLLTALTIPEDGQ--------------------------SENEGSFDYAFVDADKD-NYCNYHERL 72 (143)
Q Consensus 20 ~~~vLeiG~g~G~~t~~la~~~~~~~~--------------------------~~~~~~fD~v~~d~~~~-~~~~~~~~~ 72 (143)
..+|.-||+ |+.+..+|..+...+. ...-. .|+|++..... .....++.+
T Consensus 15 ~~~I~vIG~--G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l 91 (296)
T 3qha_A 15 QLKLGYIGL--GNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGEL 91 (296)
T ss_dssp CCCEEEECC--STTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHH
T ss_pred CCeEEEECc--CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHH
Confidence 357888887 5666667666543322 00123 79999876532 344567788
Q ss_pred HhcccCCeEEEE
Q 032292 73 MKLLKVGGIAVY 84 (143)
Q Consensus 73 ~~~L~~gG~li~ 84 (143)
.+.+++|.+++-
T Consensus 92 ~~~l~~g~ivv~ 103 (296)
T 3qha_A 92 AGHAKPGTVIAI 103 (296)
T ss_dssp HTTCCTTCEEEE
T ss_pred HHhcCCCCEEEE
Confidence 888988877753
No 399
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=42.17 E-value=34 Score=21.89 Aligned_cols=20 Identities=15% Similarity=0.150 Sum_probs=13.4
Q ss_pred CEEEEEeccccHHHHHHHhhCC
Q 032292 21 KKTIEIGVFTGYSLLLTALTIP 42 (143)
Q Consensus 21 ~~vLeiG~g~G~~t~~la~~~~ 42 (143)
.+|+-+|+ |..+..+++.+.
T Consensus 8 ~~viIiG~--G~~G~~la~~L~ 27 (140)
T 3fwz_A 8 NHALLVGY--GRVGSLLGEKLL 27 (140)
T ss_dssp SCEEEECC--SHHHHHHHHHHH
T ss_pred CCEEEECc--CHHHHHHHHHHH
Confidence 57888888 566666665543
No 400
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=41.06 E-value=27 Score=26.69 Aligned_cols=33 Identities=6% Similarity=0.071 Sum_probs=23.3
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 032292 52 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 52 ~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~ 84 (143)
..|+|++..........++.+.+.++++.+++.
T Consensus 99 ~aDvVilaVp~~~~~~vl~~i~~~l~~~~ivvs 131 (356)
T 3k96_A 99 GVTDILIVVPSFAFHEVITRMKPLIDAKTRIAW 131 (356)
T ss_dssp TCCEEEECCCHHHHHHHHHHHGGGCCTTCEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 468888765444455677888889998887653
No 401
>3on3_A Keto/oxoacid ferredoxin oxidoreductase, gamma SUB; structural genomics, PSI-2, protein structure initiative; 2.19A {Geobacter sulfurreducens}
Probab=40.29 E-value=29 Score=23.82 Aligned_cols=32 Identities=22% Similarity=0.259 Sum_probs=20.9
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcccCCeEEEEeccC
Q 032292 52 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 52 ~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
..|++++-- ...+....+.|+|||+++++...
T Consensus 70 ~~D~lv~~~-----~~~~~~~~~~l~~gg~vi~ns~~ 101 (183)
T 3on3_A 70 QCDALLALT-----QEACDKYSADLKEGGVLLVDSDL 101 (183)
T ss_dssp CCSEEEESS-----HHHHHHSTTTSCTTCEEEEETTT
T ss_pred CCCEEEEcC-----HHHHHHHHhccCCCeEEEEeCCC
Confidence 456655421 22345567899999999998543
No 402
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=39.68 E-value=75 Score=20.49 Aligned_cols=22 Identities=23% Similarity=0.090 Sum_probs=15.0
Q ss_pred cCCCEEEEEeccccHHHHHHHhhC
Q 032292 18 VNAKKTIEIGVFTGYSLLLTALTI 41 (143)
Q Consensus 18 ~~~~~vLeiG~g~G~~t~~la~~~ 41 (143)
....+|+-+|+ |..+..+++.+
T Consensus 17 ~~~~~v~IiG~--G~iG~~la~~L 38 (155)
T 2g1u_A 17 QKSKYIVIFGC--GRLGSLIANLA 38 (155)
T ss_dssp CCCCEEEEECC--SHHHHHHHHHH
T ss_pred cCCCcEEEECC--CHHHHHHHHHH
Confidence 35678999987 56666665554
No 403
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=38.18 E-value=31 Score=25.49 Aligned_cols=34 Identities=21% Similarity=0.300 Sum_probs=26.3
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 032292 51 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 51 ~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~ 84 (143)
..+|+|++..........++.+.+++.++.+++.
T Consensus 68 ~~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~ 101 (312)
T 3hn2_A 68 GPMDLVLVGLKTFANSRYEELIRPLVEEGTQILT 101 (312)
T ss_dssp CCCSEEEECCCGGGGGGHHHHHGGGCCTTCEEEE
T ss_pred CCCCEEEEecCCCCcHHHHHHHHhhcCCCCEEEE
Confidence 4689999876555566788888899999987764
No 404
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=37.85 E-value=43 Score=26.45 Aligned_cols=39 Identities=13% Similarity=0.170 Sum_probs=24.7
Q ss_pred ceeEEEEcCCcc------------chHHHHHHHHhcccCCeEEEEeccCCC
Q 032292 52 SFDYAFVDADKD------------NYCNYHERLMKLLKVGGIAVYDNTLWG 90 (143)
Q Consensus 52 ~fD~v~~d~~~~------------~~~~~~~~~~~~L~~gG~li~d~~~~~ 90 (143)
.-|+||+.-... ......+.+.+.|++|.++|.......
T Consensus 83 ~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~p 133 (431)
T 3ojo_A 83 ASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAP 133 (431)
T ss_dssp CCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCT
T ss_pred hCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCCh
Confidence 468888753211 134456778899999987776555443
No 405
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=36.29 E-value=39 Score=24.54 Aligned_cols=34 Identities=9% Similarity=0.099 Sum_probs=25.9
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 032292 51 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 51 ~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~ 84 (143)
..+|+||+..........++.+.+.++++.+++.
T Consensus 82 ~~~D~vil~vk~~~~~~v~~~i~~~l~~~~~iv~ 115 (317)
T 2qyt_A 82 GTVDYILFCTKDYDMERGVAEIRPMIGQNTKILP 115 (317)
T ss_dssp CCEEEEEECCSSSCHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCCEEEEecCcccHHHHHHHHHhhcCCCCEEEE
Confidence 4689999876555667788888888888776654
No 406
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=35.28 E-value=58 Score=23.17 Aligned_cols=46 Identities=13% Similarity=0.125 Sum_probs=32.3
Q ss_pred HHHHHHHHhcccCCeEEEEeccCCCccccCCCCCCCCCcccchHHHHHHHHHHhhcCCCeeEEE
Q 032292 66 CNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSH 129 (143)
Q Consensus 66 ~~~~~~~~~~L~~gG~li~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~ 129 (143)
...++.+.+.+++|+++++++... . ...++..++..+.+. +++.+.
T Consensus 180 ~~~~~~v~~~~~~g~Iil~Hd~~~---------~--------t~~aL~~ii~~l~~~-Gy~fvt 225 (240)
T 1ny1_A 180 KYAYDHMIKQAHPGAIYLLHTVSR---------D--------NAEALDDAITDLKKQ-GYTFKS 225 (240)
T ss_dssp HHHHHHHHHTCCTTEEEEECSCST---------T--------HHHHHHHHHHHHHHH-TCEEEC
T ss_pred HHHHHHHHhCCCCCeEEEEcCCCh---------h--------HHHHHHHHHHHHHHC-CCEEEE
Confidence 446777888899999998886421 0 456789999988754 565544
No 407
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=34.37 E-value=52 Score=24.34 Aligned_cols=34 Identities=6% Similarity=0.136 Sum_probs=25.6
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 032292 52 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 52 ~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
.+|+|++..........++.+.+.+++|.+++..
T Consensus 75 ~~D~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 75 DADVILIVVPAIHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp TCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred cCCEEEEeCCchHHHHHHHHHHHhCCCCCEEEEc
Confidence 5788888765555567788888899998877653
No 408
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=34.08 E-value=82 Score=19.34 Aligned_cols=32 Identities=13% Similarity=0.017 Sum_probs=17.3
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcccCCeEE
Q 032292 51 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIA 82 (143)
Q Consensus 51 ~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~l 82 (143)
..+|+|++..........+..+.+.+.++-++
T Consensus 68 ~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~ii 99 (140)
T 1lss_A 68 EDADMYIAVTGKEEVNLMSSLLAKSYGINKTI 99 (140)
T ss_dssp TTCSEEEECCSCHHHHHHHHHHHHHTTCCCEE
T ss_pred ccCCEEEEeeCCchHHHHHHHHHHHcCCCEEE
Confidence 45788887654332223344445667775444
No 409
>2zpa_A Uncharacterized protein YPFI; RNA modification enzyme, RNA helicase, acetyltransferase, GCN5 acetyltransferase; HET: ACO ADP; 2.35A {Escherichia coli K12}
Probab=33.71 E-value=37 Score=28.65 Aligned_cols=39 Identities=23% Similarity=0.096 Sum_probs=33.5
Q ss_pred cCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 032292 47 SENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 47 ~~~~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
..+...||++++|+...-.++++-.+...++-||++++-
T Consensus 67 ~~LG~e~~~~v~d~~~~~~pn~la~~~gtv~gGG~lvll 105 (671)
T 2zpa_A 67 TLLGREFRHAVFDARHGFDAAAFAALSGTLKAGSWLVLL 105 (671)
T ss_dssp CTTTCCBSSEEEECSSCCCHHHHHHHHTTBCTTCEEEEE
T ss_pred HhhCCccCEEEEEcCCCCCHHHHHHHhhheecceEEEEE
Confidence 345788999999998777788999999999999999863
No 410
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=33.27 E-value=1.6e+02 Score=22.33 Aligned_cols=76 Identities=18% Similarity=0.189 Sum_probs=43.2
Q ss_pred HHHHHHHhh-cCCCEEEEEeccccHHHHHHHhhCCCC-------------Cc-------------cCCCCceeEEEEcCC
Q 032292 9 QLMAMLLRL-VNAKKTIEIGVFTGYSLLLTALTIPED-------------GQ-------------SENEGSFDYAFVDAD 61 (143)
Q Consensus 9 ~~l~~l~~~-~~~~~vLeiG~g~G~~t~~la~~~~~~-------------~~-------------~~~~~~fD~v~~d~~ 61 (143)
++...|.+. ...++|+-.|+|+-..++.-.-.+.++ |+ .....+.|.|++-++
T Consensus 307 ~l~~~l~~~k~~gk~v~~yGa~~~g~~l~~~~~~~~~~i~~~~D~~~~k~g~~~~g~~ipi~~p~~~~~~~~d~vl~~~~ 386 (416)
T 4e2x_A 307 ELTALLHRLRAEGRSVVGYGATAKSATVTNFCGIGPDLVHSVYDTTPDKQNRLTPGAHIPVRPASAFSDPYPDYALLFAW 386 (416)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCSHHHHHHHHHTCCTTTSCCEEESCGGGTTEECTTTCCEEEEGGGCCSSCCSEEEESCG
T ss_pred HHHHHHHHHHHcCCeEEEEccccHHHHHHHhcCCCcceeeEEEeCCccccCccCCCCCCcCCCHHHHhhcCCCEEEEecc
Confidence 334444443 257899999987654444322223211 11 123467898888654
Q ss_pred ccchHHHHHHHHhcccCCeEEEEe
Q 032292 62 KDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 62 ~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
.- ..+..++.......||.+|+.
T Consensus 387 ~~-~~ei~~~~~~~~~~g~~~~~~ 409 (416)
T 4e2x_A 387 NH-AEEIMAKEQEFHQAGGRWILY 409 (416)
T ss_dssp GG-HHHHHHHCHHHHHTTCEEEEC
T ss_pred hh-HHHHHHHHHHHHhcCCEEEEE
Confidence 22 234555666777889999873
No 411
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=33.21 E-value=92 Score=22.85 Aligned_cols=30 Identities=13% Similarity=0.227 Sum_probs=18.6
Q ss_pred CCceeEEEEcCCccchHHHHHHHHhcccCCe
Q 032292 50 EGSFDYAFVDADKDNYCNYHERLMKLLKVGG 80 (143)
Q Consensus 50 ~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG 80 (143)
..++|+|++..-..+....++.+.++ .++.
T Consensus 65 ~~~~D~vilavK~~~~~~~l~~l~~~-~~~~ 94 (307)
T 3ego_A 65 NSDFDLLVVTVKQHQLQSVFSSLERI-GKTN 94 (307)
T ss_dssp CSCCSEEEECCCGGGHHHHHHHTTSS-CCCE
T ss_pred cCCCCEEEEEeCHHHHHHHHHHhhcC-CCCe
Confidence 35799999876544555666665543 4444
No 412
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=33.19 E-value=38 Score=24.85 Aligned_cols=62 Identities=16% Similarity=0.120 Sum_probs=35.5
Q ss_pred CCEEEEEeccccHHHHHHHhhCCCCCc---------------------c------CCCCceeEEEEcCCcc-chHHHH--
Q 032292 20 AKKTIEIGVFTGYSLLLTALTIPEDGQ---------------------S------ENEGSFDYAFVDADKD-NYCNYH-- 69 (143)
Q Consensus 20 ~~~vLeiG~g~G~~t~~la~~~~~~~~---------------------~------~~~~~fD~v~~d~~~~-~~~~~~-- 69 (143)
..+|.-||+ |..+..+|..+...+. . ..-...|+|++..... .....+
T Consensus 7 ~~~I~iIG~--G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~ 84 (303)
T 3g0o_A 7 DFHVGIVGL--GSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFG 84 (303)
T ss_dssp CCEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC-
T ss_pred CCeEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhC
Confidence 357888887 5666666665432221 1 1124579999876432 222333
Q ss_pred -HHHHhcccCCeEEE
Q 032292 70 -ERLMKLLKVGGIAV 83 (143)
Q Consensus 70 -~~~~~~L~~gG~li 83 (143)
+.+.+.+++|.+++
T Consensus 85 ~~~l~~~l~~g~ivv 99 (303)
T 3g0o_A 85 EDGVAHLMKPGSAVM 99 (303)
T ss_dssp -CCCGGGSCTTCEEE
T ss_pred hhhHHhhCCCCCEEE
Confidence 44557788887775
No 413
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=32.47 E-value=1.2e+02 Score=23.97 Aligned_cols=37 Identities=14% Similarity=0.141 Sum_probs=23.8
Q ss_pred ceeEEEEcCCcc-----------chHHHHHHHHhcccCCeEEEEeccC
Q 032292 52 SFDYAFVDADKD-----------NYCNYHERLMKLLKVGGIAVYDNTL 88 (143)
Q Consensus 52 ~fD~v~~d~~~~-----------~~~~~~~~~~~~L~~gG~li~d~~~ 88 (143)
..|+||+.-... .....++.+.+.|++|.++|.....
T Consensus 84 ~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv 131 (446)
T 4a7p_A 84 DADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTV 131 (446)
T ss_dssp TCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCC
T ss_pred cCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 458888763211 1345677788999998887764443
No 414
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=32.26 E-value=71 Score=20.77 Aligned_cols=26 Identities=12% Similarity=0.055 Sum_probs=17.3
Q ss_pred CCceeEEEEcCCccchHHHHHHHHhc
Q 032292 50 EGSFDYAFVDADKDNYCNYHERLMKL 75 (143)
Q Consensus 50 ~~~fD~v~~d~~~~~~~~~~~~~~~~ 75 (143)
.+..|++++........+.++++.+.
T Consensus 75 ~~~vDlvvi~vp~~~~~~vv~~~~~~ 100 (144)
T 2d59_A 75 PDKIEVVDLFVKPKLTMEYVEQAIKK 100 (144)
T ss_dssp SSCCSEEEECSCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEeCHHHHHHHHHHHHHc
Confidence 45789999876555555666666553
No 415
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=32.08 E-value=27 Score=25.54 Aligned_cols=34 Identities=12% Similarity=0.173 Sum_probs=25.9
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 032292 51 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 51 ~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~ 84 (143)
+++|+|++..-.......++.+.+.+.++.+++.
T Consensus 61 ~~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~ 94 (294)
T 3g17_A 61 NTFDVIIIAVKTHQLDAVIPHLTYLAHEDTLIIL 94 (294)
T ss_dssp SCEEEEEECSCGGGHHHHGGGHHHHEEEEEEEEE
T ss_pred CCCCEEEEeCCccCHHHHHHHHHHhhCCCCEEEE
Confidence 6799999876555566778888888888877653
No 416
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=30.81 E-value=29 Score=25.71 Aligned_cols=34 Identities=9% Similarity=-0.126 Sum_probs=25.7
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 032292 51 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 51 ~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~ 84 (143)
+.+|+|++..-.......++.+.+++.++.+++.
T Consensus 70 ~~~DlVilavK~~~~~~~l~~l~~~l~~~t~Iv~ 103 (320)
T 3i83_A 70 TKPDCTLLCIKVVEGADRVGLLRDAVAPDTGIVL 103 (320)
T ss_dssp SCCSEEEECCCCCTTCCHHHHHTTSCCTTCEEEE
T ss_pred CCCCEEEEecCCCChHHHHHHHHhhcCCCCEEEE
Confidence 3789999876544555678888899999887764
No 417
>2oq3_A Mannitol-specific cryptic phosphotransferase enzyme IIA component; solution structure; NMR {Escherichia coli}
Probab=30.02 E-value=2.5 Score=28.01 Aligned_cols=29 Identities=10% Similarity=-0.118 Sum_probs=21.1
Q ss_pred eEEEEcCCccchHHHHHHHHhcccCCeEE
Q 032292 54 DYAFVDADKDNYCNYHERLMKLLKVGGIA 82 (143)
Q Consensus 54 D~v~~d~~~~~~~~~~~~~~~~L~~gG~l 82 (143)
|.|+++....++.++++.+.+.|...|++
T Consensus 13 ~~i~~~~~~~~~~e~i~~l~~~L~~~g~v 41 (150)
T 2oq3_A 13 SSISVIHSAKDWQEAIDFSMVSLLDKNYI 41 (150)
T ss_dssp TTEEEESCCSSHHHHHHHTTHHHHTTTSB
T ss_pred ccEEEecCCCCHHHHHHHHHHHHHHCCCC
Confidence 56777776677888888887777666654
No 418
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=29.77 E-value=89 Score=20.62 Aligned_cols=34 Identities=6% Similarity=-0.003 Sum_probs=17.7
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 032292 51 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 51 ~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~ 84 (143)
..+|+|++...........-...+.+.|+..+++
T Consensus 104 ~~ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~ 137 (183)
T 3c85_A 104 GHVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAA 137 (183)
T ss_dssp CCCCEEEECCSSHHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCCEEEEeCCChHHHHHHHHHHHHHCCCCEEEE
Confidence 4578888754322222222233455666667765
No 419
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=29.64 E-value=15 Score=26.86 Aligned_cols=33 Identities=12% Similarity=-0.037 Sum_probs=21.4
Q ss_pred ceeEEEEcCCc-cchHHHH---HHHHhcccCCeEEEE
Q 032292 52 SFDYAFVDADK-DNYCNYH---ERLMKLLKVGGIAVY 84 (143)
Q Consensus 52 ~fD~v~~d~~~-~~~~~~~---~~~~~~L~~gG~li~ 84 (143)
..|+|++.... ......+ +.+.+.+++|.+++-
T Consensus 57 ~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~ 93 (287)
T 3pef_A 57 SCPVTFAMLADPAAAEEVCFGKHGVLEGIGEGRGYVD 93 (287)
T ss_dssp HCSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEE
T ss_pred cCCEEEEEcCCHHHHHHHHcCcchHhhcCCCCCEEEe
Confidence 46899887642 2344455 666788888876653
No 420
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=29.20 E-value=54 Score=23.33 Aligned_cols=33 Identities=15% Similarity=0.054 Sum_probs=24.5
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 032292 52 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 52 ~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~ 84 (143)
.+|+|++..........++.+.+.++++.+++.
T Consensus 63 ~~d~vi~~v~~~~~~~v~~~l~~~l~~~~~vv~ 95 (291)
T 1ks9_A 63 TSDLLLVTLKAWQVSDAVKSLASTLPVTTPILL 95 (291)
T ss_dssp TCSEEEECSCGGGHHHHHHHHHTTSCTTSCEEE
T ss_pred CCCEEEEEecHHhHHHHHHHHHhhCCCCCEEEE
Confidence 468888876555566778888889988887654
No 421
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=28.87 E-value=54 Score=23.61 Aligned_cols=33 Identities=3% Similarity=0.042 Sum_probs=24.7
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 032292 52 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 52 ~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~ 84 (143)
.+|+|++..........++.+.+.++++.+++.
T Consensus 74 ~~d~vi~~v~~~~~~~v~~~l~~~l~~~~~iv~ 106 (316)
T 2ew2_A 74 QVDLIIALTKAQQLDAMFKAIQPMITEKTYVLC 106 (316)
T ss_dssp CCSEEEECSCHHHHHHHHHHHGGGCCTTCEEEE
T ss_pred CCCEEEEEeccccHHHHHHHHHHhcCCCCEEEE
Confidence 689999876544556677788888888877664
No 422
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp}
Probab=28.52 E-value=1.1e+02 Score=22.37 Aligned_cols=61 Identities=13% Similarity=0.066 Sum_probs=36.9
Q ss_pred CCCEEEEEe-ccccHHHH--HHHhhCCCCCccCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEeccCC
Q 032292 19 NAKKTIEIG-VFTGYSLL--LTALTIPEDGQSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLW 89 (143)
Q Consensus 19 ~~~~vLeiG-~g~G~~t~--~la~~~~~~~~~~~~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d~~~~ 89 (143)
.+..||=.| .|+|=+++ .+++... ..++.+++........+......++.+|+|++|++..
T Consensus 54 ~~~~vll~G~~GtGKT~la~~ia~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~lDEi~~ 117 (338)
T 3pfi_A 54 CLDHILFSGPAGLGKTTLANIISYEMS----------ANIKTTAAPMIEKSGDLAAILTNLSEGDILFIDEIHR 117 (338)
T ss_dssp CCCCEEEECSTTSSHHHHHHHHHHHTT----------CCEEEEEGGGCCSHHHHHHHHHTCCTTCEEEEETGGG
T ss_pred CCCeEEEECcCCCCHHHHHHHHHHHhC----------CCeEEecchhccchhHHHHHHHhccCCCEEEEechhh
Confidence 345666555 57776554 3454433 2355555543334455666667788899999998753
No 423
>2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3
Probab=27.74 E-value=54 Score=23.53 Aligned_cols=44 Identities=14% Similarity=0.277 Sum_probs=25.0
Q ss_pred HHHHHHhcccCCeEEEEeccCCCccccCCCCCCCCCcccchHHHHHHHHHHhhcCCCeeEEE
Q 032292 68 YHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSH 129 (143)
Q Consensus 68 ~~~~~~~~L~~gG~li~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~ 129 (143)
.++.+.+.+++|+++++++... . ...++.+++..+.+. +|+.+.
T Consensus 194 ~~~~v~~~~~~G~IiL~Hd~~~---------~--------t~~aL~~ii~~l~~~-Gy~fvt 237 (247)
T 2j13_A 194 AHNNVMTMIHPGSILLLHAISK---------D--------NAEALAKIIDDLREK-GYHFKS 237 (247)
T ss_dssp --------CCTTBEEEECCCST---------T--------HHHHHHHHHHHHHHT-TCEEEC
T ss_pred HHHHHHHhcCCCeEEEEeCCcH---------h--------HHHHHHHHHHHHHHC-CCEEEE
Confidence 4567778889999998886421 0 456789999988754 565544
No 424
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=26.36 E-value=21 Score=26.06 Aligned_cols=34 Identities=9% Similarity=0.003 Sum_probs=21.7
Q ss_pred CceeEEEEcCCcc-chHHHHH---HHHhcccCCeEEEE
Q 032292 51 GSFDYAFVDADKD-NYCNYHE---RLMKLLKVGGIAVY 84 (143)
Q Consensus 51 ~~fD~v~~d~~~~-~~~~~~~---~~~~~L~~gG~li~ 84 (143)
...|+|++..... .....+. .+.+.+++|.+++-
T Consensus 58 ~~aDvvi~~vp~~~~~~~v~~~~~~~~~~l~~~~~vi~ 95 (302)
T 2h78_A 58 QGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLE 95 (302)
T ss_dssp TTCSEEEECCSCHHHHHHHHHSSSCGGGSSCSSCEEEE
T ss_pred hCCCeEEEECCCHHHHHHHHcCchhHHhcCCCCcEEEE
Confidence 3579999876433 3344454 56678888876653
No 425
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=26.26 E-value=84 Score=19.69 Aligned_cols=21 Identities=14% Similarity=-0.016 Sum_probs=14.5
Q ss_pred CCEEEEEeccccHHHHHHHhhCC
Q 032292 20 AKKTIEIGVFTGYSLLLTALTIP 42 (143)
Q Consensus 20 ~~~vLeiG~g~G~~t~~la~~~~ 42 (143)
.++|+-+|+ |..+..+++.+.
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~ 26 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELT 26 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHH
T ss_pred CCEEEEECC--CHHHHHHHHHHH
Confidence 357888888 567776766653
No 426
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=26.15 E-value=3.7 Score=26.00 Aligned_cols=65 Identities=15% Similarity=0.089 Sum_probs=35.7
Q ss_pred CEEEEEeccccHHHHHHHhhCCC----CCc-------c--CC---CCceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 032292 21 KKTIEIGVFTGYSLLLTALTIPE----DGQ-------S--EN---EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 21 ~~vLeiG~g~G~~t~~la~~~~~----~~~-------~--~~---~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~ 84 (143)
++|| +=||+|.+|-.+++.+.. .+. + .. .+.+|+|++..........++... .+-++-++
T Consensus 4 kkIl-l~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~~~~~~~~~~~~Dvil~~pqv~~~~~~~~~~~---~~~~v~vI 79 (106)
T 1e2b_A 4 KHIY-LFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQIAYMLPEIQRLL---PNKPVEVI 79 (106)
T ss_dssp EEEE-EECSSSTTTHHHHHHHHHHHHHSCCSEEEEEECSSSTTHHHHHCSEEEECTTSGGGHHHHHHHS---SSSCCCBC
T ss_pred cEEE-EECCCchhHHHHHHHHHHHHHHCCCCeEEEEecHHHHHhhccCCCEEEEccchhhhHHHHHHHh---cCCCceEE
Confidence 4566 448888888777776542 121 1 11 156899998765554444444433 23355555
Q ss_pred eccCC
Q 032292 85 DNTLW 89 (143)
Q Consensus 85 d~~~~ 89 (143)
+...|
T Consensus 80 ~~~~y 84 (106)
T 1e2b_A 80 DSLLY 84 (106)
T ss_dssp CHHHH
T ss_pred CHHHc
Confidence 54444
No 427
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=25.43 E-value=74 Score=23.59 Aligned_cols=33 Identities=12% Similarity=0.065 Sum_probs=24.1
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 032292 52 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 52 ~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~ 84 (143)
..|+|++..........++.+.+.++++.+++.
T Consensus 90 ~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~ 122 (354)
T 1x0v_A 90 DADILIFVVPHQFIGKICDQLKGHLKANATGIS 122 (354)
T ss_dssp TCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEE
T ss_pred CCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEE
Confidence 578988876544556677888888888876653
No 428
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=24.56 E-value=73 Score=21.54 Aligned_cols=30 Identities=13% Similarity=-0.024 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhcCCCEEEEEe-ccccHHHHH
Q 032292 7 HGQLMAMLLRLVNAKKTIEIG-VFTGYSLLL 36 (143)
Q Consensus 7 ~~~~l~~l~~~~~~~~vLeiG-~g~G~~t~~ 36 (143)
.-+.+..++....+..++=.| .|+|=+++.
T Consensus 39 ~~~~l~~~~~~~~~~~~ll~G~~G~GKT~la 69 (242)
T 3bos_A 39 LIGALKSAASGDGVQAIYLWGPVKSGRTHLI 69 (242)
T ss_dssp HHHHHHHHHHTCSCSEEEEECSTTSSHHHHH
T ss_pred HHHHHHHHHhCCCCCeEEEECCCCCCHHHHH
Confidence 334455555544567787777 688876654
No 429
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=24.45 E-value=37 Score=25.68 Aligned_cols=60 Identities=15% Similarity=0.149 Sum_probs=38.0
Q ss_pred CCCEEEEEecc--ccHHHHHHHhhCCCCCc------c---CCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEE
Q 032292 19 NAKKTIEIGVF--TGYSLLLTALTIPEDGQ------S---ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAV 83 (143)
Q Consensus 19 ~~~~vLeiG~g--~G~~t~~la~~~~~~~~------~---~~~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li 83 (143)
.+++++-||.| .|.....++......-. . ..-...|+|+.-....++.. ..+++||.+++
T Consensus 164 ~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~~ADIVI~Avg~p~~I~-----~~~vk~GavVI 234 (301)
T 1a4i_A 164 AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVK-----GEWIKPGAIVI 234 (301)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHTTCSEEEECCCCTTCBC-----GGGSCTTCEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHHHHhccCCEEEECCCCcccCC-----HHHcCCCcEEE
Confidence 68999999999 48877777666442111 1 11257899998766544311 25678876554
No 430
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=24.18 E-value=61 Score=23.20 Aligned_cols=32 Identities=13% Similarity=0.240 Sum_probs=23.7
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcccCCeEEE
Q 032292 52 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAV 83 (143)
Q Consensus 52 ~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li 83 (143)
..|+|++..........++.+.+.++++.+++
T Consensus 62 ~aDvVilavp~~~~~~v~~~l~~~l~~~~iv~ 93 (281)
T 2g5c_A 62 SPDFVMLSSPVRTFREIAKKLSYILSEDATVT 93 (281)
T ss_dssp CCSEEEECSCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred CCCEEEEcCCHHHHHHHHHHHHhhCCCCcEEE
Confidence 67999987654455567777778898887665
No 431
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=24.10 E-value=85 Score=23.89 Aligned_cols=33 Identities=9% Similarity=0.073 Sum_probs=24.3
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 032292 52 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 52 ~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~ 84 (143)
.+|+|++..........++.+.++++++.+|+.
T Consensus 82 ~aD~Vilav~~~~~~~v~~~l~~~l~~~~ivv~ 114 (404)
T 3c7a_A 82 GADVVILTVPAFAHEGYFQAMAPYVQDSALIVG 114 (404)
T ss_dssp TCSEEEECSCGGGHHHHHHHHTTTCCTTCEEEE
T ss_pred CCCEEEEeCchHHHHHHHHHHHhhCCCCcEEEE
Confidence 578888876545566788888889988876654
No 432
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=23.30 E-value=62 Score=23.33 Aligned_cols=33 Identities=12% Similarity=0.159 Sum_probs=23.5
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcccCCeEEE
Q 032292 51 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAV 83 (143)
Q Consensus 51 ~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li 83 (143)
...|+|++..........++.+.+.+++|.+++
T Consensus 66 ~~aDvVi~av~~~~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 66 DEADVVVLALPDNIIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp GTCSEEEECSCHHHHHHHHHHHGGGSCTTCEEE
T ss_pred cCCCEEEEcCCchHHHHHHHHHHHhCCCCCEEE
Confidence 357999987654455667777778888877654
No 433
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=23.17 E-value=36 Score=26.59 Aligned_cols=32 Identities=9% Similarity=-0.005 Sum_probs=23.4
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcccCCeEEE
Q 032292 52 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAV 83 (143)
Q Consensus 52 ~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li 83 (143)
..|+|++-.........++++.++++++-.++
T Consensus 117 ~ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv 148 (391)
T 4fgw_A 117 DVDIIVFNIPHQFLPRICSQLKGHVDSHVRAI 148 (391)
T ss_dssp TCSEEEECSCGGGHHHHHHHHTTTSCTTCEEE
T ss_pred cCCEEEEECChhhhHHHHHHhccccCCCceeE
Confidence 45777776655556678888888998887665
No 434
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=23.06 E-value=51 Score=24.92 Aligned_cols=22 Identities=9% Similarity=-0.121 Sum_probs=18.9
Q ss_pred CCEEEEEeccccHHHHHHHhhC
Q 032292 20 AKKTIEIGVFTGYSLLLTALTI 41 (143)
Q Consensus 20 ~~~vLeiG~g~G~~t~~la~~~ 41 (143)
+.+|+|+-||+|..++.+.++-
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G 23 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESC 23 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHT
T ss_pred CCeEEEeCcCccHHHHHHHHCC
Confidence 4689999999999999987763
No 435
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=23.00 E-value=38 Score=25.28 Aligned_cols=34 Identities=18% Similarity=0.182 Sum_probs=23.6
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 032292 51 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 51 ~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~ 84 (143)
..+|+|++..........++.+.+.++++.+++.
T Consensus 69 ~~~D~Vilavk~~~~~~~~~~l~~~l~~~~~iv~ 102 (335)
T 3ghy_A 69 GEQDVVIVAVKAPALESVAAGIAPLIGPGTCVVV 102 (335)
T ss_dssp CCCSEEEECCCHHHHHHHHGGGSSSCCTTCEEEE
T ss_pred CCCCEEEEeCCchhHHHHHHHHHhhCCCCCEEEE
Confidence 4689999876444445566666678888887764
No 436
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=22.73 E-value=97 Score=22.60 Aligned_cols=33 Identities=9% Similarity=0.107 Sum_probs=24.0
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 032292 51 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 51 ~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~ 84 (143)
...|+|++..........++.+.+ ++++.+++.
T Consensus 70 ~~~D~vi~~v~~~~~~~v~~~i~~-l~~~~~vv~ 102 (335)
T 1txg_A 70 ENAEVVLLGVSTDGVLPVMSRILP-YLKDQYIVL 102 (335)
T ss_dssp TTCSEEEECSCGGGHHHHHHHHTT-TCCSCEEEE
T ss_pred hcCCEEEEcCChHHHHHHHHHHhc-CCCCCEEEE
Confidence 357999987655556677778878 888876653
No 437
>3upu_A ATP-dependent DNA helicase DDA; RECA-like domain, SH3 domain, PIN-tower interface, coupling hydrolysis to DNA unwinding, ssDNA; 3.30A {Enterobacteria phage T4}
Probab=22.44 E-value=2.7e+02 Score=21.52 Aligned_cols=33 Identities=6% Similarity=-0.079 Sum_probs=22.0
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcccCCeEEE
Q 032292 51 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAV 83 (143)
Q Consensus 51 ~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li 83 (143)
..+|+|++|-...--...+..+.+.+..+..++
T Consensus 127 ~~~~~iiiDE~~~~~~~~~~~l~~~~~~~~~~~ 159 (459)
T 3upu_A 127 AKCRVLICDEVSMYDRKLFKILLSTIPPWCTII 159 (459)
T ss_dssp SSCSEEEESCGGGCCHHHHHHHHHHSCTTCEEE
T ss_pred cCCCEEEEECchhCCHHHHHHHHHhccCCCEEE
Confidence 468999999654333456667777777666444
No 438
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=22.10 E-value=77 Score=23.19 Aligned_cols=34 Identities=15% Similarity=0.171 Sum_probs=22.0
Q ss_pred CceeEEEEcCCcc-c-hHHHHHHHHhcccCCeEEEE
Q 032292 51 GSFDYAFVDADKD-N-YCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 51 ~~fD~v~~d~~~~-~-~~~~~~~~~~~L~~gG~li~ 84 (143)
..||+|+++-... . -...++.+.+.++.||-+++
T Consensus 49 ~~yDvIIl~d~~~~~l~~~~~~~L~~yV~~GGgLi~ 84 (259)
T 3rht_A 49 AKQDLVILSDYPAERMTAQAIDQLVTMVKAGCGLVM 84 (259)
T ss_dssp HTCSEEEEESCCGGGBCHHHHHHHHHHHHTTCEEEE
T ss_pred hcCCEEEEcCCccccCCHHHHHHHHHHHHhCCeEEE
Confidence 5899998863211 1 24566777788888876654
No 439
>2oqj_C Peptide 2G12.1 (ACPPSHVLDMRSGTCLAAEGK); immunoglobulin fold, immune system; 2.80A {Homo sapiens}
Probab=22.08 E-value=30 Score=15.72 Aligned_cols=13 Identities=8% Similarity=0.038 Sum_probs=10.2
Q ss_pred CCCEEEEEecccc
Q 032292 19 NAKKTIEIGVFTG 31 (143)
Q Consensus 19 ~~~~vLeiG~g~G 31 (143)
+|.+|||.-+|+-
T Consensus 3 ppshvldmrsgtc 15 (26)
T 2oqj_C 3 PPSHVLDMRSGTC 15 (26)
T ss_pred CchheeeccCCce
Confidence 6788999888764
No 440
>1hru_A YRDC gene product; protein folding, structural genomics, RNA, SUA5, PSI, protein structure initiative, midwest center for structural genomics; 2.00A {Escherichia coli} SCOP: d.115.1.1
Probab=22.05 E-value=1.1e+02 Score=20.86 Aligned_cols=30 Identities=13% Similarity=0.128 Sum_probs=20.6
Q ss_pred HHHHHHHhcccCCeEEEEeccCCCccccCC
Q 032292 67 NYHERLMKLLKVGGIAVYDNTLWGGTVAVP 96 (143)
Q Consensus 67 ~~~~~~~~~L~~gG~li~d~~~~~g~~~~~ 96 (143)
..++++.+.|+.||++++..-.-.|-..++
T Consensus 8 ~~i~~a~~~L~~G~iva~ptdt~ygL~~da 37 (188)
T 1hru_A 8 DAIAAAIDVLNEERVIAYPTEAVFGVGCDP 37 (188)
T ss_dssp HHHHHHHHHHHTTCCEEEECSSSEEEEECT
T ss_pred HHHHHHHHHHHCCCEEEEeCCCEeeeEEcC
Confidence 457788899999999998743333434443
No 441
>2c71_A Glycoside hydrolase, family 11\:clostridium cellulosome enzyme, dockerin type I\:polysaccharide...; acetyl-xylan, esterases, metal-ION; 1.05A {Clostridium thermocellum} SCOP: c.6.2.3 PDB: 2c79_A
Probab=21.87 E-value=1.7e+02 Score=20.27 Aligned_cols=51 Identities=10% Similarity=0.087 Sum_probs=33.5
Q ss_pred hHHHHHHHHhcccCCeEEEEeccCCCccccCCCCCCCCCcccchHHHHHHHHHHhhcCCCeeEEEe
Q 032292 65 YCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHV 130 (143)
Q Consensus 65 ~~~~~~~~~~~L~~gG~li~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~l 130 (143)
.....+.+.+.+++|.++++++..-. . . . ...++.+++..+++. +|+.+.+
T Consensus 135 ~~~i~~~v~~~~~~g~IiL~Hd~~~~-----~-----~---~-t~~al~~ii~~l~~~-Gy~fvtl 185 (216)
T 2c71_A 135 AEQRAAAVINGVRDGTIILLHDVQPE-----P-----H---P-TPEALDIIIPTLKSR-GYEFVTL 185 (216)
T ss_dssp HHHHHHHHHHHCCTTBEEEEESCCSS-----S-----C---C-HHHHHHHHHHHHHHT-TCEECCH
T ss_pred HHHHHHHHHhcCCCCcEEEEECCCCC-----h-----H---H-HHHHHHHHHHHHHHC-CCEEEEh
Confidence 34556677788999999988865210 0 0 0 456788999988755 5665443
No 442
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=21.59 E-value=84 Score=23.18 Aligned_cols=36 Identities=17% Similarity=0.546 Sum_probs=23.9
Q ss_pred CceeEEEEcCCccch-HHHHHHHHhcccCCe-EEEEec
Q 032292 51 GSFDYAFVDADKDNY-CNYHERLMKLLKVGG-IAVYDN 86 (143)
Q Consensus 51 ~~fD~v~~d~~~~~~-~~~~~~~~~~L~~gG-~li~d~ 86 (143)
..||+|+++...... ....+.+.+.++.|| +++++.
T Consensus 57 ~~~D~vV~~~~~~~l~~~~~~~l~~yV~~Ggglv~~H~ 94 (281)
T 4e5v_A 57 SPYQLVVLDYNGDSWPEETNRRFLEYVQNGGGVVIYHA 94 (281)
T ss_dssp TTCSEEEECCCSSCCCHHHHHHHHHHHHTTCEEEEEGG
T ss_pred hcCCEEEEeCCCCcCCHHHHHHHHHHHHcCCCEEEEec
Confidence 579999987653332 445666778888875 555554
No 443
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=21.44 E-value=1e+02 Score=22.73 Aligned_cols=33 Identities=12% Similarity=-0.015 Sum_probs=24.0
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 032292 52 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 52 ~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~ 84 (143)
..|+||+........+.++.+.+.++++.+++.
T Consensus 84 ~aDvVilav~~~~~~~vl~~l~~~l~~~~ivvs 116 (322)
T 2izz_A 84 HSDVLFLAVKPHIIPFILDEIGADIEDRHIVVS 116 (322)
T ss_dssp HCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred cCCEEEEEeCHHHHHHHHHHHHhhcCCCCEEEE
Confidence 579999877555566777778788888776653
No 444
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=21.21 E-value=84 Score=22.21 Aligned_cols=34 Identities=6% Similarity=0.057 Sum_probs=23.8
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 032292 51 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 51 ~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~ 84 (143)
...|+|++........+.++.+.+.+++|.+++-
T Consensus 67 ~~~Dvvi~av~~~~~~~v~~~l~~~~~~~~ivv~ 100 (266)
T 3d1l_A 67 PYAKLYIVSLKDSAFAELLQGIVEGKREEALMVH 100 (266)
T ss_dssp SCCSEEEECCCHHHHHHHHHHHHTTCCTTCEEEE
T ss_pred cCCCEEEEecCHHHHHHHHHHHHhhcCCCcEEEE
Confidence 4679999876544456667777778888776653
No 445
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=20.95 E-value=81 Score=22.16 Aligned_cols=33 Identities=9% Similarity=0.012 Sum_probs=23.0
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 032292 52 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 52 ~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
..|+|++..........++.+.+.+ +++.++.+
T Consensus 58 ~~D~vi~~v~~~~~~~v~~~l~~~l-~~~~vv~~ 90 (262)
T 2rcy_A 58 HCDIIVCAVKPDIAGSVLNNIKPYL-SSKLLISI 90 (262)
T ss_dssp HCSEEEECSCTTTHHHHHHHSGGGC-TTCEEEEC
T ss_pred cCCEEEEEeCHHHHHHHHHHHHHhc-CCCEEEEE
Confidence 5799998766555666777777777 66766643
No 446
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=20.77 E-value=78 Score=25.90 Aligned_cols=33 Identities=12% Similarity=0.129 Sum_probs=24.8
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 032292 52 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 84 (143)
Q Consensus 52 ~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~ 84 (143)
.-|+|++-.........++++.+.|++|.+|.+
T Consensus 121 ~ADVVILaVP~~~~~eVl~eI~p~LK~GaILs~ 153 (525)
T 3fr7_A 121 GSDLVLLLISDAAQADNYEKIFSHMKPNSILGL 153 (525)
T ss_dssp HCSEEEECSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred cCCEEEECCChHHHHHHHHHHHHhcCCCCeEEE
Confidence 358888876554556678888999999998744
No 447
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=20.73 E-value=64 Score=24.57 Aligned_cols=63 Identities=21% Similarity=0.101 Sum_probs=34.0
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCCCCc--------c----------C---CCCceeEEEEcCCcc-chHHHH-HHHHhc
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQ--------S----------E---NEGSFDYAFVDADKD-NYCNYH-ERLMKL 75 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~~~~--------~----------~---~~~~fD~v~~d~~~~-~~~~~~-~~~~~~ 75 (143)
..++|.-||. |..+..+|+.+..-+. + . .-...|+|++..... .....+ +..++.
T Consensus 170 ~gktiGIIGl--G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~ 247 (340)
T 4dgs_A 170 KGKRIGVLGL--GQIGRALASRAEAFGMSVRYWNRSTLSGVDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQA 247 (340)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHTTTCEEEEECSSCCTTSCCEECSSHHHHHHTCSEEEECC----------CHHHHHH
T ss_pred cCCEEEEECC--CHHHHHHHHHHHHCCCEEEEEcCCcccccCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhc
Confidence 3578889988 5666666665432111 0 0 013468888765422 112222 566788
Q ss_pred ccCCeEEE
Q 032292 76 LKVGGIAV 83 (143)
Q Consensus 76 L~~gG~li 83 (143)
+++|.++|
T Consensus 248 mk~gailI 255 (340)
T 4dgs_A 248 LGPEGIVV 255 (340)
T ss_dssp TTTTCEEE
T ss_pred CCCCCEEE
Confidence 99998886
No 448
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=20.45 E-value=31 Score=25.52 Aligned_cols=64 Identities=8% Similarity=0.034 Sum_probs=36.7
Q ss_pred CCCEEEEEeccccHHHHHHHhhCCCCCc-----------------------cCC---CCceeEEEEcCCcc-chHHHH--
Q 032292 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQ-----------------------SEN---EGSFDYAFVDADKD-NYCNYH-- 69 (143)
Q Consensus 19 ~~~~vLeiG~g~G~~t~~la~~~~~~~~-----------------------~~~---~~~fD~v~~d~~~~-~~~~~~-- 69 (143)
+..+|--||+ |..+..+|..+...+. ... -...|+|++..... .....+
T Consensus 20 ~m~~I~iIG~--G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~ 97 (310)
T 3doj_A 20 HMMEVGFLGL--GIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFD 97 (310)
T ss_dssp CSCEEEEECC--SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHS
T ss_pred cCCEEEEECc--cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhC
Confidence 3468888987 5777766666432221 000 13468998876432 233344
Q ss_pred -HHHHhcccCCeEEEE
Q 032292 70 -ERLMKLLKVGGIAVY 84 (143)
Q Consensus 70 -~~~~~~L~~gG~li~ 84 (143)
+.+.+.+++|.+++-
T Consensus 98 ~~~l~~~l~~g~~vv~ 113 (310)
T 3doj_A 98 KGGVLEQICEGKGYID 113 (310)
T ss_dssp TTCGGGGCCTTCEEEE
T ss_pred chhhhhccCCCCEEEE
Confidence 455577888776653
No 449
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=20.32 E-value=52 Score=23.21 Aligned_cols=32 Identities=19% Similarity=0.309 Sum_probs=22.0
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcccCCeEEE
Q 032292 52 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAV 83 (143)
Q Consensus 52 ~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li 83 (143)
..|+|++..........++.+.+.+++|.+++
T Consensus 63 ~aDvVilav~~~~~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 63 NADILILSIKPDLYASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp HCSEEEECSCTTTHHHHC---CCSSCTTCEEE
T ss_pred hCCEEEEEeCHHHHHHHHHHHHhhcCCCCEEE
Confidence 57999987754556677777778888888776
No 450
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=20.17 E-value=98 Score=23.05 Aligned_cols=68 Identities=7% Similarity=0.017 Sum_probs=43.6
Q ss_pred HhhcCC------CEEEEEeccc-cHHH-HHHH-hhCCCC---------C---c-----------c-CC----------CC
Q 032292 15 LRLVNA------KKTIEIGVFT-GYSL-LLTA-LTIPED---------G---Q-----------S-EN----------EG 51 (143)
Q Consensus 15 ~~~~~~------~~vLeiG~g~-G~~t-~~la-~~~~~~---------~---~-----------~-~~----------~~ 51 (143)
+...+. ++||-+|+|. |..+ +.+| +..+.. . + - .. .+
T Consensus 162 ~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~i~~~~g 241 (357)
T 2b5w_A 162 AYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYE 241 (357)
T ss_dssp HHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEEETTTSCGGGHHHHSC
T ss_pred cCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCcccCCCccCHHHHHHhCC
Confidence 445566 8999999743 6777 8888 765431 1 2 0 00 02
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 032292 52 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 85 (143)
Q Consensus 52 ~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li~d 85 (143)
.+|+||-.... ...++.+.+.|+++|.++.-
T Consensus 242 g~Dvvid~~g~---~~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 242 QMDFIYEATGF---PKHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp CEEEEEECSCC---HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEECCCC---hHHHHHHHHHHhcCCEEEEE
Confidence 57888743322 34577888999999998763
No 451
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=20.14 E-value=68 Score=20.80 Aligned_cols=33 Identities=12% Similarity=0.014 Sum_probs=19.7
Q ss_pred CCceeEEEEcCCccchHHHHHHHHhcccCCeEEE
Q 032292 50 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAV 83 (143)
Q Consensus 50 ~~~fD~v~~d~~~~~~~~~~~~~~~~L~~gG~li 83 (143)
.+..|++++.-......+.++++.+.- .+++++
T Consensus 68 ~~~vDlavi~vp~~~~~~v~~~~~~~g-i~~i~~ 100 (140)
T 1iuk_A 68 KEPVDILDVFRPPSALMDHLPEVLALR-PGLVWL 100 (140)
T ss_dssp CSCCSEEEECSCHHHHTTTHHHHHHHC-CSCEEE
T ss_pred CCCCCEEEEEeCHHHHHHHHHHHHHcC-CCEEEE
Confidence 467899998765444445566666543 345543
Done!