BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032301
(143 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2R0D|A Chain A, Crystal Structure Of Autoinhibited Form Of Grp1 Arf Gtpase
Exchange Factor
pdb|2R0D|B Chain B, Crystal Structure Of Autoinhibited Form Of Grp1 Arf Gtpase
Exchange Factor
Length = 347
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 78/147 (53%), Gaps = 30/147 (20%)
Query: 3 SLWRAISGQTNQLSDYDSTEF---WSNPERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFK 59
+L+ +I + ++ + D + + NP+R GWL K G +KTW+RRWF+L L++F+
Sbjct: 186 NLYESIKNEPFKIPEDDGNDLTHTFFNPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFE 245
Query: 60 ESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFEL-----------STRTE------- 101
+T +PRG+IP+ + L+++ ED K FEL + +TE
Sbjct: 246 YTT---DKEPRGIIPLEN-LSIREVEDP-RKPNCFELYNPSHKGQVIKACKTEADGRVVE 300
Query: 102 ---TMYFI-ADSEKEKEDWINSIGRSI 124
+Y I A S +EKE+W+ SI SI
Sbjct: 301 GNHVVYRISAPSPEEKEEWMKSIKASI 327
>pdb|2R09|A Chain A, Crystal Structure Of Autoinhibited Form Of Grp1 Arf Gtpase
Exchange Factor
pdb|2R09|B Chain B, Crystal Structure Of Autoinhibited Form Of Grp1 Arf Gtpase
Exchange Factor
Length = 347
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 30/149 (20%)
Query: 1 MGSLWRAISGQTNQLSDYDSTEF---WSNPERSGWLTKQGEYIKTWRRRWFVLKQGKLFW 57
+ +L+ +I + ++ + D + + NP+R GWL K G +KTW+RRWF+L L++
Sbjct: 184 LRNLYESIKNEPFKIPEDDGNDLTYTFFNPDREGWLLKLGGRVKTWKRRWFILTDNCLYY 243
Query: 58 FKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFEL-----------STRTE----- 101
F+ +T +PRG+IP+ + L+++ ED K FEL + +TE
Sbjct: 244 FEYTT---DKEPRGIIPLEN-LSIREVEDP-RKPNCFELYNPSHKGQVIKACKTEADGRV 298
Query: 102 -----TMYFI-ADSEKEKEDWINSIGRSI 124
+Y I A S +EKE+W SI SI
Sbjct: 299 VEGNHVVYRISAPSPEEKEEWXKSIKASI 327
>pdb|1FHW|A Chain A, Structure Of The Pleckstrin Homology Domain From Grp1 In
Complex With Inositol(1,3,4,5,6)pentakisphosphate
pdb|1FHW|B Chain B, Structure Of The Pleckstrin Homology Domain From Grp1 In
Complex With Inositol(1,3,4,5,6)pentakisphosphate
Length = 129
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 27/121 (22%)
Query: 26 NPERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAE 85
NP+R GWL K G +KTW+RRWF+L L++F+ +T +PRG+IP+ + L+++ E
Sbjct: 2 NPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTT---DKEPRGIIPLEN-LSIREVE 57
Query: 86 DVLNKQYAFEL-----------STRTE----------TMYFI-ADSEKEKEDWINSIGRS 123
D K FEL + +TE +Y I A S +EKE+W+ SI S
Sbjct: 58 DP-RKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKAS 116
Query: 124 I 124
I
Sbjct: 117 I 117
>pdb|1FHX|A Chain A, Structure Of The Pleckstrin Homology Domain From Grp1 In
Complex With Inositol 1,3,4,5-Tetrakisphosphate
pdb|1FHX|B Chain B, Structure Of The Pleckstrin Homology Domain From Grp1 In
Complex With Inositol 1,3,4,5-Tetrakisphosphate
Length = 129
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 65/121 (53%), Gaps = 27/121 (22%)
Query: 26 NPERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAE 85
NP+R GWL K G +KTW+RRWF+L L++F+ +T +PRG+IP+ + L+++ E
Sbjct: 2 NPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTT---DKEPRGIIPLEN-LSIREVE 57
Query: 86 DVLNKQYAFEL-----------STRTE----------TMYFI-ADSEKEKEDWINSIGRS 123
D K FEL + +TE +Y I A S +EKE+W SI S
Sbjct: 58 DP-RKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWXKSIKAS 116
Query: 124 I 124
I
Sbjct: 117 I 117
>pdb|1FGY|A Chain A, Grp1 Ph Domain With Ins(1,3,4,5)p4
pdb|1FGZ|A Chain A, Grp1 Ph Domain (Unliganded)
Length = 127
Score = 62.4 bits (150), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 64/121 (52%), Gaps = 27/121 (22%)
Query: 26 NPERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAE 85
NP+R GWL K G +KTW+RRWF+L L++F+ +T +PRG+IP+ + L+++
Sbjct: 4 NPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTT---DKEPRGIIPLEN-LSIREVL 59
Query: 86 DVLNKQYAFEL-----------STRTE----------TMYFI-ADSEKEKEDWINSIGRS 123
D K FEL + +TE +Y I A S +EKE+W SI S
Sbjct: 60 DP-RKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWXKSIKAS 118
Query: 124 I 124
I
Sbjct: 119 I 119
>pdb|1U2B|A Chain A, Triglycine Variant Of The Grp1 Pleckstrin Homology Domain
Unliganded
Length = 138
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 28/122 (22%)
Query: 26 NPERSGWLTK-QGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGA 84
NP+R GWL K G +KTW+RRWF+L L++F+ +T +PRG+IP+ + L+++
Sbjct: 14 NPDREGWLLKLGGGRVKTWKRRWFILTDNCLYYFEYTT---DKEPRGIIPLEN-LSIREV 69
Query: 85 EDVLNKQYAFEL-----------STRTE----------TMYFI-ADSEKEKEDWINSIGR 122
ED K FEL + +TE +Y I A S +EKE+W+ SI
Sbjct: 70 EDP-RKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKA 128
Query: 123 SI 124
SI
Sbjct: 129 SI 130
>pdb|1EAZ|A Chain A, Crystal Structure Of The Phosphoinositol
(3,4)-Bisphosphate Binding Ph Domain Of Tapp1 From Human
Length = 125
Score = 59.3 bits (142), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 29 RSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAE--D 86
++G+ KQG +K W+RR+F L + + +FK +P VIP+ V+ + D
Sbjct: 16 KAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSEL---EKEPLRVIPLKEVHKVQECKQSD 72
Query: 87 VLNKQYAFELSTRTETMYFIADSEKEKEDWINSIGRSIV 125
++ + FE+ T + T Y ADS +E WI ++ +IV
Sbjct: 73 IMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIV 111
>pdb|1U27|A Chain A, Triglycine Variant Of The Arno Pleckstrin Homology Domain
In Complex With Ins(1,3,4,5)p4
pdb|1U29|A Chain A, Triglycine Variant Of The Arno Pleckstrin Homology Domain
In Complex With Ins(1,4,5)p3
Length = 129
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 67/123 (54%), Gaps = 28/123 (22%)
Query: 25 SNPERSGWLTK-QGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKG 83
+P+R GWL K G +KTW+RRWF+L L++F+ +T +PRG+IP+ + L+++
Sbjct: 9 GSPDREGWLLKLGGGRVKTWKRRWFILTDNCLYYFEYTT---DKEPRGIIPLEN-LSIRE 64
Query: 84 AEDVLNKQYAFEL-----------STRTET----------MYFI-ADSEKEKEDWINSIG 121
+D K FEL + +TE +Y I A +++EK++WI SI
Sbjct: 65 VDDP-RKPNCFELYIPNNKGQLIKACKTEADGRVVEGNHMVYRISAPTQEEKDEWIKSIQ 123
Query: 122 RSI 124
++
Sbjct: 124 AAV 126
>pdb|2DKP|A Chain A, Solution Structure Of The Ph Domain Of Pleckstrin Homology
Domain-Containing Protein Family A Member 5 From Human
Length = 128
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 7/104 (6%)
Query: 29 RSGWLTKQGEY-IKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASC-LTVKGAED 86
R GWL KQ +K W++RWFVL LF++++ + G I + S + + +ED
Sbjct: 23 RRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDE---KEEGILGSILLPSFQIALLTSED 79
Query: 87 VLNKQYAFELS-TRTETMYFIADSEKEKEDWINS-IGRSIVQHS 128
+N++YAF+ + T YF D+ KE E W+ + + ++VQ S
Sbjct: 80 HINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAALVQTS 123
>pdb|1P6S|A Chain A, Solution Structure Of The Pleckstrin Homology Domain Of
Human Protein Kinase B Beta (PkbAKT)
Length = 111
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 14/101 (13%)
Query: 29 RSGWLTKQGEYIKTWRRRWFVLK-QGKLFWFKESTVTRASKPRGVIP------VASCLTV 81
+ GWL K+GEYIKTWR R+F+LK G +KE R P +P VA C +
Sbjct: 8 KEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKE----RPEAPDQTLPPLNNFSVAECQLM 63
Query: 82 KGAEDVLNKQY--AFELSTRTETMYFIADSEKEKEDWINSI 120
K N + +T E + + DS E+E+W+ +I
Sbjct: 64 KTERPRPNTFVIRCLQWTTVIERTFHV-DSPDEREEWMRAI 103
>pdb|1V89|A Chain A, Solution Structure Of The Pleckstrin Homology Domain Of
Human Kiaa0053 Protein
Length = 118
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 18/110 (16%)
Query: 25 SNPERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGA 84
S P + GWL KQ +K W++R+FVL+ +L+++K+ T KP+G + + C T+K
Sbjct: 6 SGPIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEEDT---KPQGCMYLPGC-TIK-- 59
Query: 85 EDVLNKQ----YAFELSTRT--------ETMYFIADSEKEKEDWINSIGR 122
E N + + FE+ + ++ +A S+ E E+W+ + R
Sbjct: 60 EIATNPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRR 109
>pdb|1PLS|A Chain A, Solution Structure Of A Pleckstrin Homology Domain
Length = 113
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 29 RSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVL 88
R G+L K+G TW+ W VL + + ++K+ + + P+G+IP+ +D
Sbjct: 7 REGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKS---DNSPKGMIPLKGSTLTSPCQDFG 63
Query: 89 NKQYAFEL-STRTETMYFIADSEKEKEDWINSIGRSI 124
+ + F++ +T+ + +F A +E++ W+ I ++I
Sbjct: 64 KRMFVFKITTTKQQDHFFQAAFLEERDAWVRDINKAI 100
>pdb|3TFM|A Chain A, Myosin X Ph1n-Ph2-Ph1c Tandem
Length = 228
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 16/113 (14%)
Query: 29 RSGWLTKQGEYIKT-----WRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKG 83
+ GWL G T W++RWFVL+Q KL +F+ + K +G + V S K
Sbjct: 60 KQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDS---EEKLKGTVEVRS---AKE 113
Query: 84 AEDVLNKQYAFELSTRTETMYFIADSEKEKEDWINSIGRSIVQHSRSVTDSEI 136
D NK+ ++ T + IA+S ++ W S++ S TD EI
Sbjct: 114 IIDNTNKENGIDIIMADRTFHLIAESPEDASQWF-----SVLSQVHSSTDQEI 161
>pdb|2YRY|A Chain A, Solution Structure Of The Ph Domain Of Pleckstrin Homology
Domain-Containing Family A Member 6 From Human
Length = 122
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 29 RSGWLTKQGEY-IKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASC-LTVKGAED 86
++GWL KQ +K W +RWFVL LF++K+ + G IP+ S + D
Sbjct: 24 KAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDE---KEESILGSIPLLSFRVAAVQPSD 80
Query: 87 VLNKQYAFEL-STRTETMYFIADSEKEKEDWINSIGRS 123
+++++ F+ T +F A+S +E+E WI ++G +
Sbjct: 81 NISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEA 118
>pdb|2D9Y|A Chain A, Solution Structure Of The Ph Domain Of Pepp-3 From Human
Length = 117
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 29 RSGWLTKQGEY-IKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASC-LTVKGAED 86
++GWL KQ +K W +RWFVL LF++K+ + G IP+ S + D
Sbjct: 13 KAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDE---KEESILGSIPLLSFRVAAVQPSD 69
Query: 87 VLNKQYAFEL-STRTETMYFIADSEKEKEDWINSIGRS 123
+++++ F+ T +F A+S +E+E WI ++G +
Sbjct: 70 NISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEA 107
>pdb|1FAO|A Chain A, Structure Of The Pleckstrin Homology Domain From
Dapp1PHISH IN COMPLEX WITH INOSITOL 1,3,4,5-
Tetrakisphosphate
pdb|1FB8|A Chain A, Structure Of The Pleckstrin Homology Domain From
Dapp1/phish
Length = 126
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 29 RSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKG--AED 86
+ G+LTKQG +KTW+ RWF L + +L +FK+ + +P ++ + C V+ +++
Sbjct: 20 KEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQM---SPEPIRILDLTECSAVQFDYSQE 76
Query: 87 VLNKQYAFELSTRTETMYFIADSEKEKEDWINSIGRSIVQHSRSVTDSE 135
+N F L T Y A + E ++WI + + Q + + E
Sbjct: 77 RVN---CFCLVFPFRTFYLCAKTGVEADEWIKILRWKLSQIRKQLNQGE 122
>pdb|1UNR|A Chain A, Crystal Structure Of The Ph Domain Of Pkb Alpha In Complex
With A Sulfate Molecule
pdb|1UNQ|A Chain A, High Resolution Crystal Structure Of The Pleckstrin
Homology Domain Of Protein Kinase BAKT BOUND TO INS
(1,3,4,5)-Tetrakisphophate
Length = 125
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 29 RSGWLTKQGEYIKTWRRRWFVLKQ-GKLFWFKE--STVTRASKPRGVIPVASCLTVKGAE 85
+ GWL K+GEYIKTWR R+F+LK G +KE V + P VA C +K
Sbjct: 10 KEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTER 69
Query: 86 DVLNKQY--AFELSTRTETMYFIADSEKEKEDWINSI 120
N + +T E + + E E+E+W +I
Sbjct: 70 PRPNTFIIRCLQWTTVIERTFHVETPE-EREEWTTAI 105
>pdb|2UVM|A Chain A, Structure Of Pkbalpha Ph Domain In Complex With A Novel
Inositol Headgroup Surrogate, Benzene 1,2,3,4-
Tetrakisphosphate
Length = 123
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 29 RSGWLTKQGEYIKTWRRRWFVLKQ-GKLFWFKEST--VTRASKPRGVIPVASCLTVKGAE 85
+ GWL K+GEYIKTWR R+F+LK G +KE V + P VA C +K
Sbjct: 8 KEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTER 67
Query: 86 DVLNKQY--AFELSTRTETMYFIADSEKEKEDWINSI 120
N + +T E + + E E+E+W +I
Sbjct: 68 PRPNTFIIRCLQWTTVIERTFHVETPE-EREEWTTAI 103
>pdb|1UNP|A Chain A, Crystal Structure Of The Pleckstrin Homology Domain Of Pkb
Alpha
Length = 121
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 29 RSGWLTKQGEYIKTWRRRWFVLKQ-GKLFWFKEST--VTRASKPRGVIPVASCLTVKGAE 85
+ GWL K+GEYIKTWR R+F+LK G +KE V + P VA C +K
Sbjct: 8 KEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTER 67
Query: 86 DVLNKQY--AFELSTRTETMYFIADSEKEKEDWINSI 120
N + +T E + + E E+E+W +I
Sbjct: 68 PRPNTFIIRCLQWTTVIERTFHVETPE-EREEWTTAI 103
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 29 RSGWLTKQGEYIKTWRRRWFVLKQ-GKLFWFKE--STVTRASKPRGVIPVASCLTVKGAE 85
+ GWL K+GEYIKTWR R+F+LK G +KE V + P VA C +K
Sbjct: 8 KEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTER 67
Query: 86 DVLNKQY--AFELSTRTETMYFIADSEKEKEDWINSI 120
N + +T E + + ++ +E+E+W +I
Sbjct: 68 PRPNTFIIRCLQWTTVIERTFHV-ETPEEREEWTTAI 103
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 29 RSGWLTKQGEYIKTWRRRWFVLKQ-GKLFWFKE--STVTRASKPRGVIPVASCLTVKGAE 85
+ GWL K+GEYIKTWR R+F+LK G +KE V + P VA C +K
Sbjct: 11 KEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTER 70
Query: 86 DVLNKQY--AFELSTRTETMYFIADSEKEKEDWINSI 120
N + +T E + + E E+E+W +I
Sbjct: 71 PRPNTFIIRCLQWTTVIERTFHVETPE-EREEWTTAI 106
>pdb|1H10|A Chain A, High Resolution Structure Of The Pleckstrin Homology
Domain Of Protein Kinase BAKT BOUND TO
Ins(1,3,4,5)-Tetrakisphophate
Length = 125
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 29 RSGWLTKQGEYIKTWRRRWFVLKQ-GKLFWFKEST--VTRASKPRGVIPVASCLTVKGAE 85
+ GWL K+GEYIKTWR R+F+LK G +KE V + P VA C K
Sbjct: 10 KEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLXKTER 69
Query: 86 DVLNKQY--AFELSTRTETMYFIADSEKEKEDWINSI 120
N + +T E + + E E+E+W +I
Sbjct: 70 PRPNTFIIRCLQWTTVIERTFHVETPE-EREEWTTAI 105
>pdb|2UZS|A Chain A, A Transforming Mutation In The Pleckstrin Homology Domain
Of Akt1 In Cancer (Akt1-Ph_e17k)
Length = 125
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 29 RSGWLTKQGEYIKTWRRRWFVLKQ-GKLFWFKEST--VTRASKPRGVIPVASCLTVKGAE 85
+ GWL K+G+YIKTWR R+F+LK G +KE V + P VA C +K
Sbjct: 10 KEGWLHKRGKYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTER 69
Query: 86 DVLNKQY--AFELSTRTETMYFIADSEKEKEDWINSI 120
N + +T E + + E E+E+W +I
Sbjct: 70 PRPNTFIIRCLQWTTVIERTFHVETPE-EREEWTTAI 105
>pdb|2UZR|A Chain A, A Transforming Mutation In The Pleckstrin Homology Domain
Of Akt1 In Cancer (Akt1-Ph_e17k)
Length = 124
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 29 RSGWLTKQGEYIKTWRRRWFVLKQ-GKLFWFKEST--VTRASKPRGVIPVASCLTVKGAE 85
+ GWL K+G+YIKTWR R+F+LK G +KE V + P VA C +K
Sbjct: 9 KEGWLHKRGKYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTER 68
Query: 86 DVLNKQY--AFELSTRTETMYFIADSEKEKEDWINSI 120
N + +T E + + E E+E+W +I
Sbjct: 69 PRPNTFIIRCLQWTTVIERTFHVETPE-EREEWTTAI 104
>pdb|1WG7|A Chain A, Solution Structure Of Pleckstrin Homology Domain From
Human Kiaa1058 Protein
Length = 150
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 61/110 (55%), Gaps = 17/110 (15%)
Query: 29 RSGWLTKQGEY------IKTWRRRWFVLKQG-----KLFWFKESTVTRASKPRGVIPVAS 77
+ GWL K +++++RR+F L Q L ++K+ +++ +P+G I + S
Sbjct: 20 KHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISK--EPKGSIFLDS 77
Query: 78 CLTVKGAEDVLNKQYAFELSTRTETMYFIA-DSEKEKEDWINSIGRSIVQ 126
C+ V V +++AFEL + ++ Y +A DSE E E+WI +I I+Q
Sbjct: 78 CMGVVQNNKV--RRFAFELKMQDKSSYLLAADSEVEMEEWI-TILNKILQ 124
>pdb|2X18|A Chain A, The Crystal Structure Of The Ph Domain Of Human Akt3
Protein Kinase
pdb|2X18|B Chain B, The Crystal Structure Of The Ph Domain Of Human Akt3
Protein Kinase
pdb|2X18|C Chain C, The Crystal Structure Of The Ph Domain Of Human Akt3
Protein Kinase
pdb|2X18|D Chain D, The Crystal Structure Of The Ph Domain Of Human Akt3
Protein Kinase
pdb|2X18|E Chain E, The Crystal Structure Of The Ph Domain Of Human Akt3
Protein Kinase
pdb|2X18|F Chain F, The Crystal Structure Of The Ph Domain Of Human Akt3
Protein Kinase
pdb|2X18|G Chain G, The Crystal Structure Of The Ph Domain Of Human Akt3
Protein Kinase
pdb|2X18|H Chain H, The Crystal Structure Of The Ph Domain Of Human Akt3
Protein Kinase
Length = 119
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 29 RSGWLTKQGEYIKTWRRRWFVLK-QGKLFWFKESTV-TRASKPRGVIPVASCLTVKGAED 86
+ GW+ K+GEYIK WR R+F+LK G +KE P VA C +K
Sbjct: 9 KEGWVQKRGEYIKNWRPRYFLLKTDGSFIGYKEKPQDVDLPYPLNNFSVAKCQLMKTERP 68
Query: 87 VLNKQY--AFELSTRTETMYFIADSEKEKEDWINSI 120
N + +T E + + D+ +E+E+W +I
Sbjct: 69 KPNTFIIRCLQWTTVIERTFHV-DTPEEREEWTEAI 103
>pdb|1ZM0|A Chain A, Crystal Structure Of The Carboxyl Terminal Ph Domain Of
Pleckstrin To 2.1 Angstroms
pdb|1ZM0|B Chain B, Crystal Structure Of The Carboxyl Terminal Ph Domain Of
Pleckstrin To 2.1 Angstroms
Length = 114
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 8/107 (7%)
Query: 20 STEFWSNPERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCL 79
S EF + G L KQG K W+ R F+L++ + A P G I + C+
Sbjct: 2 SPEFRGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAG-AEDPLGAIHLRGCV 60
Query: 80 TVKGAEDVLN-----KQYAFELSTRTETMYFI-ADSEKEKEDWINSI 120
V E N ++ FE+ T E YF+ A + KE+ +WI +I
Sbjct: 61 -VTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAI 106
>pdb|1X05|A Chain A, Solution Structure Of The C-Terminal Ph Domain Of Human
Pleckstrin
Length = 129
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 29 RSGWLTKQGEYIKTWRRRWFVLKQ--GKLFWFKESTVTRASKPRGVIPVASCLTVKGAED 86
+ G L KQG K W+ R F+L++ L ++ + A P G I + C+ V E
Sbjct: 20 KQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAG---AEDPLGAIHLRGCV-VTSVES 75
Query: 87 VLN-----KQYAFELSTRTETMYFI-ADSEKEKEDWINSI 120
N ++ FE+ T E YF+ A + KE+ +WI +I
Sbjct: 76 NSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAI 115
>pdb|2I5C|A Chain A, Crystal Structure Of The C-Terminal Ph Domain Of
Pleckstrin In Complex With D-Myo-Ins(1,2,3,4,5)p5
pdb|2I5C|B Chain B, Crystal Structure Of The C-Terminal Ph Domain Of
Pleckstrin In Complex With D-Myo-Ins(1,2,3,4,5)p5
pdb|2I5C|C Chain C, Crystal Structure Of The C-Terminal Ph Domain Of
Pleckstrin In Complex With D-Myo-Ins(1,2,3,4,5)p5
pdb|2I5F|A Chain A, Crystal Structure Of The C-Terminal Ph Domain Of
Pleckstrin In Complex With D-Myo-Ins(1,2,3,5,6)p5
Length = 109
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 29 RSGWLTKQGEYIKTWRRRWFVLKQ--GKLFWFKESTVTRASKPRGVIPVASCLTVKGAED 86
+ G L KQG K W+ R F+L++ L ++ + A P G I + C+ V E
Sbjct: 9 KQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAG---AEDPLGAIHLRGCV-VTSVES 64
Query: 87 VLN-----KQYAFELSTRTETMYFI-ADSEKEKEDWINSI 120
N ++ FE+ T E YF+ A + KE+ +WI +I
Sbjct: 65 NSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAI 104
>pdb|1XX0|A Chain A, Structure Of The C-Terminal Ph Domain Of Human Pleckstrin
Length = 127
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 29 RSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVL 88
+ G L KQG K W+ R F+L++ + A P G I + C+ V E
Sbjct: 24 KQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAG-AEDPLGAIHLRGCV-VTSVESNS 81
Query: 89 N-----KQYAFELSTRTETMYFI-ADSEKEKEDWINSI 120
N ++ FE+ T E YF+ A + KE+ +WI +I
Sbjct: 82 NGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAI 119
>pdb|2RSG|A Chain A, Solution Structure Of The Cert Ph Domain
Length = 94
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Query: 28 ERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDV 87
ER G L+K YI W+ RW VLK L ++K T RG I ++ + D
Sbjct: 2 ERCGVLSKWTNYIHGWQDRWVVLKNNALSYYKSEDETEYG-CRGSICLSKAVITPHDFD- 59
Query: 88 LNKQYAFELSTRTETMYFIADSEKEKEDWINSI 120
+ F++S Y A ++ WI++I
Sbjct: 60 ---ECRFDISVNDSVWYLRAQDPDHRQQWIDAI 89
>pdb|1QQG|A Chain A, Crystal Structure Of The Ph-Ptb Targeting Region Of Irs-1
pdb|1QQG|B Chain B, Crystal Structure Of The Ph-Ptb Targeting Region Of Irs-1
Length = 264
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 14/106 (13%)
Query: 24 WSNPERSGWLTKQGEYIKTWRRRWFVLK-------QGKLFWFKESTV--TRASKPRGVIP 74
+S+ + G+L K K+ +R+FVL+ +L +++ ++S P+ IP
Sbjct: 7 FSDVRKVGYLRKP----KSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIP 62
Query: 75 VASCLTVKGAEDVLNKQYAFELSTRTETMYFIADSEKEKEDWINSI 120
+ SC + D NK + L TR E ADSE E++ W ++
Sbjct: 63 LESCFNINKRADSKNK-HLVALYTRDEHFAIAADSEAEQDSWYQAL 107
>pdb|2DN6|A Chain A, Solution Structure Of The Ph Domain Of Kiaa0640 Protein
From Human
Length = 115
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 29 RSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVL 88
+ G++ K+G K W RWFVLK + ++ + +G I + V+ D
Sbjct: 10 KQGYMMKKGHRRKNWTERWFVLKPNIISYYVSEDLKDK---KGDILLDENCCVESLPDKD 66
Query: 89 NKQYAFELSTRTETMYFIADSEKEKEDWINSIGRSI 124
K+ F + +T A +K+K++WI +I +I
Sbjct: 67 GKKCLFLVKCFDKTFEISASDKKKKQEWIQAIHSTI 102
>pdb|1V5U|A Chain A, Solution Structure Of The C-Terminal Pleckstrin Homology
Domain Of Sbf1 From Mouse
Length = 117
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
Query: 31 GWLTKQGEYIKTWRRRWFVLKQGK--LFWFKESTVTRASKPRGVIPVASCLTVK------ 82
G L K+G ++K W+ RWFVL + K L ++ T +GVI +A V
Sbjct: 12 GILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRMDTEC---KGVIDLAEVEAVAPGTPTI 68
Query: 83 GAEDVLNKQYAFELSTRTETMYFIADSEKEKEDWINSI 120
GA ++++ F++ T F A + W++ I
Sbjct: 69 GAPKTVDEKAFFDVKTTRRVYNFCAQDVPSAQQWVDRI 106
>pdb|1UPQ|A Chain A, Crystal Structure Of The Pleckstrin Homology (Ph) Domain
Of Pepp1
pdb|1UPR|A Chain A, Crystal Structure Of The Pepp1 Pleckstrin Homology Domain
In Complex With Inositol 1,3,4,5-Tetrakisphosphate
Length = 123
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 31 GWLTKQ-GEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASC-LTVKGAEDVL 88
GWL KQ ++ W+RRWFVL LF++K+S R G + + S + G
Sbjct: 15 GWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDS---REESVLGSVLLPSYNIRPDGPGAPR 71
Query: 89 NKQYAFELSTRTETMYFI-ADSEKEKEDWINSIGRS 123
+++ F Y + AD+ ++ W+ ++GR+
Sbjct: 72 GRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRA 107
>pdb|1X1G|A Chain A, Solution Structure Of The C-Terminal Ph Domain Of Human
Pleckstrin 2
Length = 129
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 29 RSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAED-- 86
+ G+L KQG K W+ R FVL++ F ++P G + L V ED
Sbjct: 20 KQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSL-VSALEDNG 78
Query: 87 -----VLNKQ-YAFELSTRTETMYFI-ADSEKEKEDWINSI 120
N Q F++ T+ +T Y+I A S+ E+ +WI +I
Sbjct: 79 VPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAI 119
>pdb|2D9X|A Chain A, Solution Structure Of The Ph Domain Of Oxysterol Binding
Protein-Related Protein 11 From Human
Length = 120
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 31 GWLTKQGEYIKTWRRRWFVL-KQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLN 89
G+L K + W+ R+FVL + L + + +R KPRG + +A + ED
Sbjct: 12 GYLMKYTNLVTGWQYRFFVLNNEAGLLEYFVNEQSRNQKPRGTLQLAGAVISPSDED--- 68
Query: 90 KQYAFELSTRTETMYFI-ADSEKEKEDWINSIGRSIVQHSRSV 131
+ F ++ + Y + A KE++ W++ + H+ ++
Sbjct: 69 -SHTFTVNAASGEQYKLRATDAKERQHWVSRLQICTQHHTEAI 110
>pdb|4H8S|A Chain A, Crystal Structure Of Human Appl2barph Domain
pdb|4H8S|B Chain B, Crystal Structure Of Human Appl2barph Domain
pdb|4H8S|C Chain C, Crystal Structure Of Human Appl2barph Domain
pdb|4H8S|D Chain D, Crystal Structure Of Human Appl2barph Domain
Length = 407
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 26/111 (23%)
Query: 28 ERSGWLT---KQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIP------VASC 78
+++G+L K G TW R +F + G L +PRG + + +C
Sbjct: 302 QKAGYLNLRNKTGLVTTTWERLYFFTQGGNLMC----------QPRGAVAGGLIQDLDNC 351
Query: 79 LTVKGAEDVLNKQYAFELSTRTETMYFI--ADSEKEKEDW---INSIGRSI 124
+ A D +++Y F+++T I A+S KE E+W IN+I R I
Sbjct: 352 SVM--AVDCEDRRYCFQITTPNGKSGIILQAESRKENEEWICAINNISRQI 400
>pdb|2KCJ|A Chain A, Solution Structure Of Fapp1 Ph Domain
Length = 108
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 31 GWLTKQGEYIKTWRRRWFVLKQGKLFWF-KESTVTRASKPRGVIPVASC-LTVKGAEDVL 88
G L K Y+ W+ RWFVL G L ++ + V + SK G I +A C + V A++
Sbjct: 11 GVLYKWTNYLTGWQPRWFVLDNGILSYYDSQDDVCKGSK--GSIKMAVCEIKVHSADNT- 67
Query: 89 NKQYAFELSTRTETMYFI-ADSEKEKEDWINSIGRS 123
EL E +++ A + E++ W+ ++G S
Sbjct: 68 ----RMELIIPGEQHFYMKAVNAAERQRWLVALGSS 99
>pdb|2DA0|A Chain A, Solution Structure Of The Ph Domain Of Pip2-Dependent Arf1
Gtpase-Activating Protein From Human
Length = 114
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 13/99 (13%)
Query: 28 ERSGWLTKQGEYI-KTWRRRWFVLKQGKLFWFKESTVTRASKPR--GVIPVASCLTVKGA 84
E+ G+L K+ + I K W+RR +K G L T++ A+ R + + +C A
Sbjct: 11 EKKGYLLKKSDGIRKVWQRRKCSVKNGIL------TISHATSNRQPAKLNLLTCQVKPNA 64
Query: 85 EDVLNKQYAFELSTRTETMYFIADSEKEKEDWINSIGRS 123
ED + +F+L + T +F A+ E++ WI+ + S
Sbjct: 65 ED----KKSFDLISHNRTYHFQAEDEQDYVAWISVLTNS 99
>pdb|3RCP|A Chain A, Crystal Structure Of The Fapp1 Pleckstrin Homology Domain
Length = 103
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 31 GWLTKQGEYIKTWRRRWFVLKQGKLFWF-KESTVTRASKPRGVIPVASC-LTVKGAEDVL 88
G L K Y+ W+ RWFVL G L ++ + V + SK G I A C + V A++
Sbjct: 3 GVLYKWTNYLTGWQPRWFVLDNGILSYYDSQDDVCKGSK--GSIKXAVCEIKVHSADNT- 59
Query: 89 NKQYAFELSTRTETMYFI-ADSEKEKEDWINSIGRSIVQHSRSVTDSEIV 137
EL E ++ A + E++ W+ ++G S S+TD+ +V
Sbjct: 60 ----RXELIIPGEQHFYXKAVNAAERQRWLVALGSS----KASLTDTRLV 101
>pdb|1U5D|A Chain A, Crystal Structure Of The Ph Domain Of Skap55
pdb|1U5D|B Chain B, Crystal Structure Of The Ph Domain Of Skap55
pdb|1U5D|C Chain C, Crystal Structure Of The Ph Domain Of Skap55
pdb|1U5D|D Chain D, Crystal Structure Of The Ph Domain Of Skap55
Length = 108
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 29 RSGWLTKQGE----YIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGA 84
+ G+L K+ + + W++RW V+ +G +++ ++ +P+G + +V+ A
Sbjct: 5 KQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANE---KSKQPKGTFLIKG-YSVRMA 60
Query: 85 EDVL---NKQYAFELSTRTETMY-FIADSEKEKEDWINSI 120
+ K+ FEL+++ Y F A S E DW++ I
Sbjct: 61 PHLRRDSKKESCFELTSQDRRTYEFTATSPAEARDWVDQI 100
>pdb|3AJ4|A Chain A, Crystal Structure Of The Ph Domain Of Evectin-2 From
Human Complexed With O-Phospho-L-Serine
pdb|3AJ4|B Chain B, Crystal Structure Of The Ph Domain Of Evectin-2 From
Human Complexed With O-Phospho-L-Serine
pdb|3VIA|A Chain A, Crystal Structure Of The Ph Domain Of Evectin-2 From
Human
pdb|3VIA|B Chain B, Crystal Structure Of The Ph Domain Of Evectin-2 From
Human
Length = 112
Score = 33.5 bits (75), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 29 RSGWLTKQGEYIKTWRRRWFVL-KQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDV 87
+SGWL +Q +K W++ WF L G L ++ + TR + V C+ ++ ++
Sbjct: 7 KSGWLLRQSTILKRWKKNWFDLWSDGHLIYYDDQ--TRQNIEDKVHMPMDCINIRTGQEC 64
Query: 88 LNKQ 91
+ Q
Sbjct: 65 RDTQ 68
>pdb|2DHI|A Chain A, Solution Structure Of The Ph Domain Of Evectin-2 From
Mouse
Length = 120
Score = 33.1 bits (74), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 29 RSGWLTKQGEYIKTWRRRWFVL-KQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDV 87
+SGWL +Q +K W++ WF L G L ++ + TR S V C+ ++ +
Sbjct: 10 KSGWLLRQSTILKRWKKNWFDLWSDGHLIYYDDQ--TRQSIEDKVHMPVDCINIRTGHEC 67
Query: 88 LNKQ 91
+ Q
Sbjct: 68 RDIQ 71
>pdb|2COD|A Chain A, Solution Structure Of The N-Terminal Ph Domain Of Arap2
Protein From Human
Length = 115
Score = 32.3 bits (72), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 70 RGVIPVASCLTVKGAEDVLNKQYAFELSTRTETMYFIADSEKEKEDWINSIGRSIVQHS 128
+G+IP+++ TV+ D NK FE+ T T F + E+E+ DWI+ + ++ S
Sbjct: 49 KGIIPLSAISTVRVQGD--NK---FEVVTTQRTFVFRVEKEEERNDWISILLNALKSQS 102
>pdb|2D9V|A Chain A, Solution Structure Of The Ph Domain Of Pleckstrin
Homology Domain-Containing Protein Family B Member 1
From Mouse
Length = 130
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 29 RSGWLTKQGEYIKTWRRRWFVL-KQGKLFWFKESTV 63
R GWL +Q ++ W+R WF L G L ++ + T
Sbjct: 10 RGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETA 45
>pdb|2FJL|A Chain A, Solution Structure Of The Split Ph Domain In Phospholipase
C-Gamma1
Length = 150
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 70 RGVIPVASCLTVKGAEDVLNKQYAFELSTRTE---TMYFIADSEKEKEDWINSIGRSIVQ 126
RGV+ V +C E N+ + F +S + ++ ADS++E +DW+ I R + Q
Sbjct: 90 RGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKI-REVAQ 148
>pdb|4A6F|B Chain B, Crystal Structure Of Slm1-ph Domain In Complex With
Phosphoserine
Length = 120
Score = 29.6 bits (65), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 29 RSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVAS 77
+SG+L ++ +++K++ + ++VL L FK A + + ++PV S
Sbjct: 8 KSGFLERRSKFLKSYSKGYYVLTPNFLHEFKT-----ADRKKDLVPVMS 51
>pdb|2LUL|A Chain A, Solution Nmr Structure Of Ph Domain Of Tyrosine-Protein
Kinase Tec From Homo Sapiens, Northeast Structural
Genomics Consortium (Nesg) Target Hr3504c
Length = 164
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 42 TWRRRWFVLKQGKLFWFKESTVTRASKP--RGVIPVAS--CL-TVKGAEDVLNKQ--YAF 94
++ R FVL + L +++ RA K +G I V+ C+ VK + V+ Q Y F
Sbjct: 35 NYKERLFVLTKSMLTYYE----GRAEKKYRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPF 90
Query: 95 ELSTRTETMYFIADSEKEKEDWINSIGRSI 124
++ T+Y A S + ++ W+ + I
Sbjct: 91 QVVHDANTLYIFAPSPQSRDLWVKKLKEEI 120
>pdb|3NSU|A Chain A, A Systematic Screen For Protein-Lipid Interactions In
Saccharomyces Cerevisiae
pdb|3NSU|B Chain B, A Systematic Screen For Protein-Lipid Interactions In
Saccharomyces Cerevisiae
pdb|4A6F|A Chain A, Crystal Structure Of Slm1-ph Domain In Complex With
Phosphoserine
pdb|4A6H|A Chain A, Crystal Structure Of Slm1-Ph Domain In Complex With
Inositol-4-Phosphate
pdb|4A6H|B Chain B, Crystal Structure Of Slm1-Ph Domain In Complex With
Inositol-4-Phosphate
pdb|4A6H|C Chain C, Crystal Structure Of Slm1-Ph Domain In Complex With
Inositol-4-Phosphate
pdb|4A6H|D Chain D, Crystal Structure Of Slm1-Ph Domain In Complex With
Inositol-4-Phosphate
pdb|4A6K|A Chain A, Crystal Structure Of Slm1-Ph Domain In Complex With
D-Myo-Inositol-4-Phosphate
pdb|4A6K|B Chain B, Crystal Structure Of Slm1-Ph Domain In Complex With
D-Myo-Inositol-4-Phosphate
pdb|4A6K|C Chain C, Crystal Structure Of Slm1-Ph Domain In Complex With
D-Myo-Inositol-4-Phosphate
pdb|4A6K|D Chain D, Crystal Structure Of Slm1-Ph Domain In Complex With
D-Myo-Inositol-4-Phosphate
Length = 120
Score = 28.9 bits (63), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 29 RSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVAS 77
+SG+L ++ +++K++ + ++VL L FK A + + ++PV S
Sbjct: 8 KSGFLERRSKFLKSYSKGYYVLTPNFLHEFKT-----ADRKKDLVPVMS 51
>pdb|1WI1|A Chain A, Solution Structure Of The Ph Domain Of Human Calcium-
Dependent Activator Protein For Secretion (Caps)
Length = 126
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 25 SNPERSGWLTKQGEYI-KTWRRRWFVLKQGKLFWFKESTV-TRASKPRGVIPV-ASCLTV 81
S + SG+L G+ + K W++R+FVL Q + F + + ++P+ ++ + +
Sbjct: 6 SGMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDY 65
Query: 82 KGAEDVLNKQYAFELSTR-TETMYFIADSEKEKEDWINSIGRSIVQHSRSVTDSE 135
+ L AF + + +T+ F +D E+++ W+ ++ R+ Q + V ++
Sbjct: 66 TDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATGQSHKPVPPTQ 120
>pdb|3PP2|A Chain A, Crystal Structure Of The Pleckstrin Homology Domain Of
Arhgap27
pdb|3PP2|B Chain B, Crystal Structure Of The Pleckstrin Homology Domain Of
Arhgap27
Length = 124
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 41 KTWRRRWFVLKQGKLFWFKESTVTRAS---KPRGVIPVASCLTVKGA------EDVLNKQ 91
K W W VL+ G L +FK+S + A +P + ++GA +D +++
Sbjct: 29 KHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWAPKDKSSRK 88
Query: 92 YAFELSTRTETMYFI-ADSEKEKEDWINSIGRSI 124
EL +R + Y I DSE W +I + I
Sbjct: 89 NVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGI 122
>pdb|4A5K|A Chain A, Structural Analyses Of Slm1-Ph Domain Demonstrate Ligand
Binding In The Non-Canonical Site
pdb|4A5K|B Chain B, Structural Analyses Of Slm1-Ph Domain Demonstrate Ligand
Binding In The Non-Canonical Site
pdb|4A5K|C Chain C, Structural Analyses Of Slm1-Ph Domain Demonstrate Ligand
Binding In The Non-Canonical Site
pdb|4A5K|D Chain D, Structural Analyses Of Slm1-Ph Domain Demonstrate Ligand
Binding In The Non-Canonical Site
Length = 118
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 29 RSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVAS 77
+SG+L ++ +++K++ + ++VL L FK A + + ++PV S
Sbjct: 6 KSGFLERRSKFLKSYSKGYYVLTPNFLHEFKT-----ADRKKDLVPVMS 49
>pdb|1WGQ|A Chain A, Solution Structure Of The Pleckstrin Homology Domain Of
Mouse Ethanol Decreased 4 Protein
Length = 109
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Query: 41 KTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRT 100
K W+ WFV+K L+ + S A + + ++ TV +D ++ F+L +
Sbjct: 22 KPWKHLWFVIKNKVLYTYAASEDVAALESQPLL----GFTVTLVKDENSESKVFQLLHKG 77
Query: 101 ETMY-FIADSEKEKEDWINSIGRSIV 125
Y F AD + WI++ V
Sbjct: 78 MVFYVFKADDAHSTQRWIDAFQEGTV 103
>pdb|3TCA|A Chain A, Crystal Structure Of The Ras-Associating And
Pleckstrin-Homology Domains Of Riam
pdb|3TCA|B Chain B, Crystal Structure Of The Ras-Associating And
Pleckstrin-Homology Domains Of Riam
Length = 291
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 27 PERSGWLTKQGEYIKTWRRRWFVLKQGKLFW 57
PE G L + + K+W+RR+F+L+ +++
Sbjct: 168 PELEGALYLKEDGKKSWKRRYFLLRASGIYY 198
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 27.3 bits (59), Expect = 3.3, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 31 GWLTKQGE-YIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLN 89
G+++K G ++ W+RR+F L +L W E P+ ++ + +V+ E +
Sbjct: 563 GYMSKMGNPFLTQWQRRYFYLFPNRLEWRGE-----GEAPQSLLTMEEIQSVE--ETQIK 615
Query: 90 KQYAFELSTRTETMYFI-ADSEKEKEDW 116
++ L R + + DS+ E W
Sbjct: 616 ERKCLLLKIRGGKQFILQCDSDPELVQW 643
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 27.3 bits (59), Expect = 3.4, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 31 GWLTKQGE-YIKTWRRRWFVLKQGKLFWFKE 60
G+++K G ++ W+RR+F L +L W E
Sbjct: 563 GYMSKMGNPFLTQWQRRYFYLFPNRLEWRGE 593
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 27.3 bits (59), Expect = 3.4, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 31 GWLTKQGE-YIKTWRRRWFVLKQGKLFWFKE 60
G+++K G ++ W+RR+F L +L W E
Sbjct: 563 GYMSKMGNPFLTQWQRRYFYLFPNRLEWRGE 593
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 27.3 bits (59), Expect = 3.4, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 31 GWLTKQGE-YIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLN 89
G+++K G ++ W+RR+F L +L W E P+ ++ + +V+ E +
Sbjct: 562 GYMSKMGNPFLTQWQRRYFYLFPNRLEWRGE-----GEAPQSLLTMEEIQSVE--ETQIK 614
Query: 90 KQYAFELSTRTETMYFI-ADSEKEKEDW 116
++ L R + + DS+ E W
Sbjct: 615 ERKCLLLKIRGGKQFILQCDSDPELVQW 642
>pdb|3FEH|A Chain A, Crystal Structure Of Full Length Centaurin Alpha-1
pdb|3LJU|X Chain X, Crystal Structure Of Full Length Centaurin Alpha-1 Bound
With The Head Group Of Pip3
Length = 386
Score = 25.8 bits (55), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/104 (18%), Positives = 45/104 (43%), Gaps = 11/104 (10%)
Query: 29 RSGWLTKQG-EYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVAS----CLTVKG 83
+ G++ K G + + +R+RWF + +L +FK+ A RG + + S + G
Sbjct: 271 KEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFA---RGEVFIGSKESGYTVLHG 327
Query: 84 AEDVLNKQ---YAFELSTRTETMYFIADSEKEKEDWINSIGRSI 124
+ + T F ++E ++ +W+ + +++
Sbjct: 328 FPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAV 371
>pdb|3FM8|C Chain C, Crystal Structure Of Full Length Centaurin Alpha-1 Bound
With The Fha Domain Of Kif13b (Capri Target)
pdb|3FM8|D Chain D, Crystal Structure Of Full Length Centaurin Alpha-1 Bound
With The Fha Domain Of Kif13b (Capri Target)
pdb|3MDB|C Chain C, Crystal Structure Of The Ternary Complex Of Full Length
Centaurin Alpha-1, Kif13b Fha Domain, And Ip4
pdb|3MDB|D Chain D, Crystal Structure Of The Ternary Complex Of Full Length
Centaurin Alpha-1, Kif13b Fha Domain, And Ip4
Length = 392
Score = 25.8 bits (55), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 19/104 (18%), Positives = 45/104 (43%), Gaps = 11/104 (10%)
Query: 29 RSGWLTKQG-EYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVAS----CLTVKG 83
+ G++ K G + + +R+RWF + +L +FK+ A RG + + S + G
Sbjct: 273 KEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFA---RGEVFIGSKESGYTVLHG 329
Query: 84 AEDVLNKQ---YAFELSTRTETMYFIADSEKEKEDWINSIGRSI 124
+ + T F ++E ++ +W+ + +++
Sbjct: 330 FPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAV 373
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.129 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,366,901
Number of Sequences: 62578
Number of extensions: 162676
Number of successful extensions: 475
Number of sequences better than 100.0: 66
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 414
Number of HSP's gapped (non-prelim): 68
length of query: 143
length of database: 14,973,337
effective HSP length: 89
effective length of query: 54
effective length of database: 9,403,895
effective search space: 507810330
effective search space used: 507810330
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 46 (22.3 bits)