Query 032301
Match_columns 143
No_of_seqs 114 out of 1109
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 12:17:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032301.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/032301hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01264 PH_melted Melted pleck 99.9 1.7E-23 3.7E-28 128.3 11.1 95 28-124 1-101 (101)
2 cd01233 Unc104 Unc-104 pleckst 99.9 5.1E-23 1.1E-27 127.4 12.3 95 27-125 2-99 (100)
3 cd01251 PH_centaurin_alpha Cen 99.9 7.1E-23 1.5E-27 127.3 12.2 95 29-126 1-102 (103)
4 cd01260 PH_CNK Connector enhan 99.9 1.9E-22 4.2E-27 124.0 11.7 90 29-123 2-96 (96)
5 cd01238 PH_Tec Tec pleckstrin 99.9 4.7E-22 1E-26 124.2 11.3 94 28-122 1-105 (106)
6 cd01257 PH_IRS Insulin recepto 99.9 9.6E-22 2.1E-26 121.1 12.3 92 26-122 1-100 (101)
7 cd01265 PH_PARIS-1 PARIS-1 ple 99.9 7.2E-22 1.6E-26 121.1 11.3 89 29-123 1-93 (95)
8 cd01236 PH_outspread Outspread 99.9 1.3E-21 2.9E-26 120.9 11.5 91 29-121 1-101 (104)
9 cd01235 PH_SETbf Set binding f 99.9 4.2E-21 9E-26 119.0 12.4 92 30-124 2-101 (101)
10 cd01247 PH_GPBP Goodpasture an 99.9 1.1E-20 2.5E-25 114.7 12.4 89 29-122 1-90 (91)
11 cd01252 PH_cytohesin Cytohesin 99.9 1.6E-20 3.5E-25 120.7 13.5 96 28-128 1-117 (125)
12 cd01266 PH_Gab Gab (Grb2-assoc 99.9 1.1E-20 2.3E-25 118.5 11.4 91 30-123 2-107 (108)
13 cd01246 PH_oxysterol_bp Oxyste 99.8 1.4E-19 2.9E-24 109.9 12.0 90 29-123 1-91 (91)
14 cd01250 PH_centaurin Centaurin 99.8 1.7E-19 3.6E-24 110.2 11.5 92 29-122 1-93 (94)
15 PF00169 PH: PH domain; Inter 99.8 1.1E-18 2.3E-23 107.7 13.4 98 27-124 1-103 (104)
16 cd01244 PH_RasGAP_CG9209 RAS_G 99.8 7.2E-19 1.6E-23 107.8 10.9 79 40-122 18-97 (98)
17 cd01245 PH_RasGAP_CG5898 RAS G 99.8 2.7E-19 5.9E-24 109.3 8.8 89 30-122 2-97 (98)
18 cd01241 PH_Akt Akt pleckstrin 99.8 5.6E-18 1.2E-22 105.1 11.7 92 27-123 1-101 (102)
19 cd01263 PH_anillin Anillin Ple 99.8 1.8E-17 3.9E-22 105.1 10.6 96 28-123 2-122 (122)
20 cd01219 PH_FGD FGD (faciogenit 99.7 1.6E-16 3.5E-21 98.4 13.1 97 27-125 2-100 (101)
21 cd01230 PH_EFA6 EFA6 Pleckstri 99.7 3.4E-16 7.4E-21 98.8 12.2 99 29-128 2-115 (117)
22 cd01253 PH_beta_spectrin Beta- 99.7 4.6E-16 1E-20 96.9 10.9 92 29-122 1-103 (104)
23 cd01254 PH_PLD Phospholipase D 99.7 5.2E-16 1.1E-20 99.0 10.1 79 42-123 32-121 (121)
24 KOG0930 Guanine nucleotide exc 99.7 7.4E-16 1.6E-20 108.4 10.6 95 26-125 259-376 (395)
25 cd01237 Unc112 Unc-112 pleckst 99.7 2E-15 4.4E-20 92.6 10.3 85 39-125 16-104 (106)
26 smart00233 PH Pleckstrin homol 99.7 1E-14 2.2E-19 88.7 13.3 96 28-124 2-101 (102)
27 cd01220 PH_CDEP Chondrocyte-de 99.6 1.2E-14 2.6E-19 89.4 12.3 96 27-125 2-98 (99)
28 PF15409 PH_8: Pleckstrin homo 99.6 9.2E-15 2E-19 87.4 10.6 85 31-123 1-88 (89)
29 PF15413 PH_11: Pleckstrin hom 99.6 6.8E-15 1.5E-19 92.6 10.6 95 29-123 1-112 (112)
30 cd01256 PH_dynamin Dynamin ple 99.6 2.6E-14 5.5E-19 85.6 10.5 94 27-123 1-104 (110)
31 PF15410 PH_9: Pleckstrin homo 99.6 4E-14 8.8E-19 90.1 11.8 95 29-124 2-118 (119)
32 cd00821 PH Pleckstrin homology 99.5 1.7E-13 3.7E-18 82.5 9.5 93 29-122 1-95 (96)
33 cd01234 PH_CADPS CADPS (Ca2+-d 99.5 3.2E-14 7E-19 85.9 6.0 103 28-130 3-116 (117)
34 cd00900 PH-like Pleckstrin hom 99.5 1.2E-12 2.6E-17 79.2 11.7 90 30-123 2-99 (99)
35 cd01218 PH_phafin2 Phafin2 Pl 99.4 6.3E-12 1.4E-16 77.8 12.0 99 27-128 4-102 (104)
36 cd01242 PH_ROK Rok (Rho- assoc 99.3 9.1E-11 2E-15 72.2 12.3 96 29-124 2-110 (112)
37 KOG3723 PH domain protein Melt 99.3 7.6E-13 1.6E-17 101.1 -0.3 125 4-131 713-843 (851)
38 cd01259 PH_Apbb1ip Apbb1ip (Am 99.2 7.3E-11 1.6E-15 72.7 7.5 98 29-126 2-110 (114)
39 cd01243 PH_MRCK MRCK (myotonic 99.2 7.6E-10 1.7E-14 69.1 12.1 96 28-123 3-118 (122)
40 cd01261 PH_SOS Son of Sevenles 99.2 3.9E-10 8.5E-15 70.6 10.8 100 26-126 3-111 (112)
41 PF14593 PH_3: PH domain; PDB: 99.2 5.5E-10 1.2E-14 69.0 10.6 90 26-127 12-102 (104)
42 cd01239 PH_PKD Protein kinase 99.2 6.2E-10 1.3E-14 69.0 9.8 93 28-123 1-117 (117)
43 KOG0690 Serine/threonine prote 99.2 7.7E-11 1.7E-15 85.8 6.0 101 25-128 13-120 (516)
44 KOG2059 Ras GTPase-activating 99.2 1.4E-10 3.1E-15 90.5 7.8 107 27-137 565-677 (800)
45 KOG1090 Predicted dual-specifi 99.1 2.8E-11 6E-16 97.5 2.6 96 26-124 1633-1731(1732)
46 KOG3640 Actin binding protein 99.1 2.1E-10 4.6E-15 91.8 7.3 102 26-127 989-1109(1116)
47 cd01249 PH_oligophrenin Oligop 99.1 3.1E-09 6.8E-14 65.2 10.1 91 29-121 1-102 (104)
48 PLN00188 enhanced disease resi 99.0 7.2E-09 1.6E-13 81.9 11.3 101 26-127 3-112 (719)
49 cd01258 PH_syntrophin Syntroph 98.9 6.3E-09 1.4E-13 64.5 7.3 94 29-122 1-107 (108)
50 cd01240 PH_beta-ARK Beta adren 98.8 5.3E-09 1.2E-13 64.0 4.2 98 26-127 2-101 (116)
51 cd01222 PH_clg Clg (common-sit 98.7 7.3E-07 1.6E-11 54.5 11.3 92 25-125 2-96 (97)
52 cd01224 PH_Collybistin Collybi 98.7 1.2E-06 2.6E-11 54.3 12.0 96 27-122 2-105 (109)
53 cd01225 PH_Cool_Pix Cool (clon 98.7 6.7E-07 1.5E-11 55.3 10.8 102 22-124 7-109 (111)
54 cd01262 PH_PDK1 3-Phosphoinosi 98.7 4.4E-07 9.5E-12 54.1 9.5 87 27-124 1-88 (89)
55 PTZ00267 NIMA-related protein 98.7 1.6E-07 3.5E-12 72.8 9.9 98 25-124 375-476 (478)
56 KOG0932 Guanine nucleotide exc 98.7 1.6E-08 3.4E-13 77.8 3.5 103 25-129 504-622 (774)
57 KOG3751 Growth factor receptor 98.7 9.3E-08 2E-12 73.0 7.3 100 26-125 316-425 (622)
58 cd01226 PH_exo84 Exocyst compl 98.6 9.9E-07 2.1E-11 53.9 9.9 96 28-125 3-99 (100)
59 KOG0521 Putative GTPase activa 98.6 4.5E-08 9.7E-13 79.3 3.7 102 26-131 273-375 (785)
60 PLN02866 phospholipase D 98.6 1.8E-06 4E-11 71.2 12.6 100 25-127 180-310 (1068)
61 KOG4424 Predicted Rho/Rac guan 98.5 3.8E-07 8.2E-12 70.4 6.5 106 20-127 265-372 (623)
62 PF12814 Mcp5_PH: Meiotic cell 98.5 1.1E-05 2.4E-10 51.6 11.9 97 29-125 11-122 (123)
63 KOG3543 Ca2+-dependent activat 98.4 6.8E-08 1.5E-12 75.5 1.4 109 26-134 463-575 (1218)
64 KOG0248 Cytoplasmic protein Ma 98.2 1.9E-06 4E-11 68.0 4.5 97 27-128 249-345 (936)
65 cd01221 PH_ephexin Ephexin Ple 98.1 5.8E-05 1.3E-09 48.1 9.7 93 28-120 4-118 (125)
66 KOG3531 Rho guanine nucleotide 98.1 4.9E-07 1.1E-11 72.4 -0.2 95 29-126 926-1021(1036)
67 cd01223 PH_Vav Vav pleckstrin 98.0 0.00017 3.7E-09 45.2 9.5 101 26-126 3-113 (116)
68 KOG3549 Syntrophins (type gamm 98.0 1.3E-05 2.7E-10 59.0 4.9 116 3-125 250-387 (505)
69 cd01232 PH_TRIO Trio pleckstri 98.0 0.00046 9.9E-09 43.5 11.2 96 27-125 5-113 (114)
70 PTZ00283 serine/threonine prot 97.9 6.6E-05 1.4E-09 58.7 8.6 100 25-125 371-490 (496)
71 PF15406 PH_6: Pleckstrin homo 97.9 9.9E-05 2.2E-09 45.5 6.6 65 50-121 46-110 (112)
72 cd01231 PH_Lnk LNK-family Plec 97.8 0.00016 3.5E-09 43.9 7.1 79 39-122 17-106 (107)
73 KOG1739 Serine/threonine prote 97.8 5.5E-05 1.2E-09 57.8 5.5 94 27-125 24-117 (611)
74 cd01228 PH_BCR-related BCR (br 97.8 0.00038 8.2E-09 42.0 7.8 86 27-123 3-93 (96)
75 KOG1451 Oligophrenin-1 and rel 97.7 0.00018 3.9E-09 56.3 7.0 96 25-123 263-366 (812)
76 KOG1117 Rho- and Arf-GTPase ac 97.6 4.5E-05 9.7E-10 61.8 3.3 96 24-127 84-180 (1186)
77 PF15408 PH_7: Pleckstrin homo 97.6 3.9E-05 8.5E-10 45.2 2.2 90 30-125 1-98 (104)
78 KOG1117 Rho- and Arf-GTPase ac 97.6 0.00025 5.4E-09 57.7 7.4 94 26-122 491-599 (1186)
79 PF15404 PH_4: Pleckstrin homo 97.4 0.0037 8.1E-08 42.6 9.4 53 29-81 1-61 (185)
80 KOG4236 Serine/threonine prote 96.7 0.0025 5.3E-08 50.2 4.3 98 27-128 413-527 (888)
81 PF15405 PH_5: Pleckstrin homo 96.6 0.015 3.3E-07 37.7 6.9 95 28-123 2-134 (135)
82 KOG4807 F-actin binding protei 96.6 7.1E-06 1.5E-10 61.1 -9.7 83 41-125 33-115 (593)
83 KOG3727 Mitogen inducible gene 96.4 0.00038 8.3E-09 54.2 -1.7 87 40-127 372-461 (664)
84 KOG3551 Syntrophins (type beta 96.3 0.0038 8.2E-08 46.9 3.1 101 26-126 291-403 (506)
85 cd01227 PH_Dbs Dbs (DBL's big 96.3 0.15 3.3E-06 33.0 10.9 83 42-127 28-118 (133)
86 cd01248 PH_PLC Phospholipase C 96.2 0.1 2.2E-06 32.7 8.8 74 44-122 22-114 (115)
87 KOG0705 GTPase-activating prot 96.2 0.0023 5E-08 50.3 1.4 36 92-127 446-482 (749)
88 PF15411 PH_10: Pleckstrin hom 96.1 0.17 3.7E-06 32.0 9.9 92 25-120 5-116 (116)
89 KOG2070 Guanine nucleotide exc 95.6 0.038 8.3E-07 43.0 5.8 98 23-122 306-404 (661)
90 KOG3531 Rho guanine nucleotide 94.9 0.025 5.5E-07 46.5 3.1 101 26-130 749-850 (1036)
91 KOG1738 Membrane-associated gu 94.9 0.0029 6.4E-08 50.0 -2.2 50 27-79 562-614 (638)
92 cd01255 PH_TIAM TIAM Pleckstri 94.8 0.68 1.5E-05 30.3 9.0 84 45-128 51-158 (160)
93 KOG4407 Predicted Rho GTPase-a 94.8 0.001 2.2E-08 56.5 -5.0 102 23-125 919-1042(1973)
94 KOG4424 Predicted Rho/Rac guan 94.7 0.04 8.7E-07 43.5 3.6 87 39-128 509-599 (623)
95 KOG3523 Putative guanine nucle 94.7 0.094 2E-06 41.8 5.5 80 42-121 498-591 (695)
96 KOG1737 Oxysterol-binding prot 94.6 0.025 5.3E-07 46.5 2.4 90 27-123 77-167 (799)
97 PF08458 PH_2: Plant pleckstri 94.5 0.18 4E-06 31.4 5.5 39 89-127 68-106 (110)
98 KOG0248 Cytoplasmic protein Ma 93.2 0.038 8.3E-07 44.6 1.0 92 26-125 258-349 (936)
99 KOG1264 Phospholipase C [Lipid 92.3 0.32 7E-06 40.4 5.1 59 69-127 852-913 (1267)
100 KOG4047 Docking protein 1 (p62 90.6 0.19 4E-06 38.8 2.1 101 26-126 7-119 (429)
101 KOG3551 Syntrophins (type beta 90.6 0.41 8.9E-06 36.4 3.8 39 89-127 234-274 (506)
102 KOG0592 3-phosphoinositide-dep 90.5 1.5 3.2E-05 35.0 6.9 89 28-128 452-541 (604)
103 KOG2996 Rho guanine nucleotide 88.8 2.5 5.4E-05 34.1 6.9 105 24-130 403-517 (865)
104 KOG1170 Diacylglycerol kinase 88.7 0.011 2.4E-07 48.3 -5.9 95 28-128 3-98 (1099)
105 KOG0517 Beta-spectrin [Cytoske 86.8 0.015 3.1E-07 51.4 -6.5 97 28-125 2300-2410(2473)
106 PF15277 Sec3-PIP2_bind: Exocy 79.2 11 0.00025 22.6 9.1 81 44-126 4-90 (91)
107 PF04714 BCL_N: BCL7, N-termin 76.8 2.1 4.7E-05 22.7 1.6 21 41-61 28-48 (52)
108 KOG1264 Phospholipase C [Lipid 72.0 9.2 0.0002 32.4 4.8 36 27-62 475-510 (1267)
109 cd05394 RasGAP_RASA2 RASA2 (or 72.0 1 2.2E-05 33.5 -0.4 28 24-51 280-312 (313)
110 KOG3521 Predicted guanine nucl 70.5 5.8 0.00013 32.6 3.3 97 27-129 427-531 (846)
111 cd05128 RasGAP_GAP1_like The G 66.3 1.8 3.8E-05 32.3 -0.2 27 25-51 284-315 (315)
112 cd05134 RasGAP_RASA3 RASA3 (or 65.9 2.3 5E-05 31.6 0.4 28 25-52 278-310 (310)
113 KOG4095 Uncharacterized conser 65.8 3.3 7E-05 27.3 1.0 21 41-61 29-49 (165)
114 cd05135 RasGAP_RASAL Ras GTPas 62.7 2.5 5.5E-05 31.7 0.1 27 25-51 301-333 (333)
115 KOG3520 Predicted guanine nucl 58.2 50 0.0011 29.2 6.7 59 69-130 666-727 (1167)
116 PF06017 Myosin_TH1: Myosin ta 54.6 68 0.0015 22.0 8.6 90 26-125 49-144 (199)
117 COG4026 Uncharacterized protei 51.5 54 0.0012 23.4 5.0 28 101-128 249-276 (290)
118 PF14470 bPH_3: Bacterial PH d 51.0 49 0.0011 19.3 9.4 76 42-121 20-95 (96)
119 KOG0976 Rho/Rac1-interacting s 49.7 12 0.00026 31.6 1.9 98 28-125 813-920 (1265)
120 KOG1729 FYVE finger containing 41.9 8.5 0.00018 28.4 -0.0 87 41-128 58-144 (288)
121 KOG1329 Phospholipase D1 [Lipi 36.9 31 0.00068 29.5 2.4 93 28-125 176-270 (887)
122 PLN02958 diacylglycerol kinase 31.3 1E+02 0.0022 24.6 4.4 27 101-127 82-108 (481)
123 KOG3518 Putative guanine nucle 28.8 41 0.00089 25.6 1.8 40 89-128 394-436 (521)
124 PF10882 bPH_5: Bacterial PH d 27.5 1.4E+02 0.0029 17.7 3.7 29 90-121 69-97 (100)
125 COG4687 Uncharacterized protei 27.0 1.7E+02 0.0037 18.5 5.3 68 48-119 27-95 (122)
126 KOG4471 Phosphatidylinositol 3 24.3 2.7E+02 0.0058 23.2 5.5 70 55-126 65-138 (717)
127 PF06523 DUF1106: Protein of u 23.6 55 0.0012 18.8 1.3 11 1-11 1-11 (91)
128 cd01269 PLX Pollux (PLX) Phosp 22.7 1.7E+02 0.0036 18.9 3.4 24 102-125 103-126 (129)
129 PF08671 SinI: Anti-repressor 22.3 1E+02 0.0023 14.4 2.1 13 114-126 3-15 (30)
130 PF12456 hSac2: Inositol phosp 21.0 2.2E+02 0.0049 17.7 6.5 57 26-82 29-88 (115)
131 KOG3549 Syntrophins (type gamm 20.7 1.7E+02 0.0038 22.5 3.7 36 89-124 223-260 (505)
132 KOG2677 Stoned B synaptic vesi 20.4 2.3E+02 0.005 23.9 4.5 96 28-126 446-573 (922)
No 1
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.91 E-value=1.7e-23 Score=128.30 Aligned_cols=95 Identities=24% Similarity=0.424 Sum_probs=80.3
Q ss_pred ceEEEEEEeCC---CCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccC---CCcceEEEEeCCe
Q 032301 28 ERSGWLTKQGE---YIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVL---NKQYAFELSTRTE 101 (143)
Q Consensus 28 ~~~G~L~k~~~---~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~---~~~~~f~i~~~~~ 101 (143)
+.+|||.++++ ..+.|++|||+|+++.|+||+.... ...+.++|+|+.|..|....+.. ..+++|.|.++++
T Consensus 1 ~~~G~l~k~~g~~r~~K~WkrRwF~L~~~~L~y~K~~~~--~~~~~g~IdL~~~~sVk~~~~~~~~~~~~~~Fei~tp~r 78 (101)
T cd01264 1 LIEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSK--DDPDDCSIDLSKIRSVKAVAKKRRDRSLPKAFEIFTADK 78 (101)
T ss_pred CcceEEeecCccceeeecceeEEEEEeCCEEEEEeccCc--cCCCCceEEcccceEEeeccccccccccCcEEEEEcCCc
Confidence 36899999987 7899999999999999999998752 12234999999999887765322 3469999999999
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHH
Q 032301 102 TMYFIADSEKEKEDWINSIGRSI 124 (143)
Q Consensus 102 ~~~~~a~s~~e~~~W~~al~~~~ 124 (143)
+|+|+|+|++++++|+++|+.|+
T Consensus 79 t~~l~A~se~e~e~WI~~i~~a~ 101 (101)
T cd01264 79 TYILKAKDEKNAEEWLQCLNIAV 101 (101)
T ss_pred eEEEEeCCHHHHHHHHHHHHhhC
Confidence 99999999999999999998763
No 2
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=99.91 E-value=5.1e-23 Score=127.37 Aligned_cols=95 Identities=24% Similarity=0.440 Sum_probs=81.0
Q ss_pred CceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCccc---CCCcceEEEEeCCeEE
Q 032301 27 PERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDV---LNKQYAFELSTRTETM 103 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~---~~~~~~f~i~~~~~~~ 103 (143)
++++|||.++++..+.|++|||||+++.|.||+++. +..+.+.|+|..+.+ ...++. .+++++|.|.++++++
T Consensus 2 v~k~G~L~Kkg~~~k~WkkRwfvL~~~~L~yyk~~~---~~~~~~~I~L~~~~v-~~~~~~~~~~~~~~~F~I~t~~rt~ 77 (100)
T cd01233 2 VSKKGYLNFPEETNSGWTRRFVVVRRPYLHIYRSDK---DPVERGVINLSTARV-EHSEDQAAMVKGPNTFAVCTKHRGY 77 (100)
T ss_pred cceeEEEEeeCCCCCCcEEEEEEEECCEEEEEccCC---CccEeeEEEecccEE-EEccchhhhcCCCcEEEEECCCCEE
Confidence 578999999998889999999999999999999987 567899999997643 333321 2468999999999999
Q ss_pred EEEcCCHHHHHHHHHHHHHHHH
Q 032301 104 YFIADSEKEKEDWINSIGRSIV 125 (143)
Q Consensus 104 ~~~a~s~~e~~~W~~al~~~~~ 125 (143)
+|+|+|++|+.+|+.||+....
T Consensus 78 ~~~A~s~~e~~~Wi~ai~~~~~ 99 (100)
T cd01233 78 LFQALSDKEMIDWLYALNPLYA 99 (100)
T ss_pred EEEcCCHHHHHHHHHHhhhhhc
Confidence 9999999999999999976543
No 3
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=99.90 E-value=7.1e-23 Score=127.25 Aligned_cols=95 Identities=21% Similarity=0.531 Sum_probs=77.5
Q ss_pred eEEEEEEeCCC-CCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceE----EeecCcc-cCC-CcceEEEEeCCe
Q 032301 29 RSGWLTKQGEY-IKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCL----TVKGAED-VLN-KQYAFELSTRTE 101 (143)
Q Consensus 29 ~~G~L~k~~~~-~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~----~v~~~~~-~~~-~~~~f~i~~~~~ 101 (143)
++|||.|+++. .+.|++|||||.++.|+||+++. +..|.+.|+|..+. +....++ ... ..++|.|.++++
T Consensus 1 KeG~L~K~g~~~~k~wkkRwFvL~~~~L~Yyk~~~---d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~F~i~t~~R 77 (103)
T cd01251 1 KEGFMEKTGPKHTEGFKKRWFTLDDRRLMYFKDPL---DAFAKGEVFLGSQEDGYEVREGLPPGTQGNHWYGVTLVTPER 77 (103)
T ss_pred CceeEEecCCCCCCCceeEEEEEeCCEEEEECCCC---CcCcCcEEEeeccccceeEeccCCccccccccceEEEEeCCe
Confidence 58999999875 58999999999999999999987 55799999997543 2222121 122 235999999999
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHHHh
Q 032301 102 TMYFIADSEKEKEDWINSIGRSIVQ 126 (143)
Q Consensus 102 ~~~~~a~s~~e~~~W~~al~~~~~~ 126 (143)
+|+|+|+|++|+.+|+.||+.++..
T Consensus 78 ty~l~a~s~~e~~~Wi~ai~~v~~~ 102 (103)
T cd01251 78 KFLFACETEQDRREWIAAFQNVLSR 102 (103)
T ss_pred EEEEECCCHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999998863
No 4
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=99.89 E-value=1.9e-22 Score=123.99 Aligned_cols=90 Identities=30% Similarity=0.688 Sum_probs=77.0
Q ss_pred eEEEEEEeCCCCC----CceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCC-eEE
Q 032301 29 RSGWLTKQGEYIK----TWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRT-ETM 103 (143)
Q Consensus 29 ~~G~L~k~~~~~~----~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~-~~~ 103 (143)
.+|||.+++...+ .|++|||||.++.|+||+++. +..+.+.|+|+++++....+ ..++++|.|.+++ +++
T Consensus 2 ~~GwL~kk~~~~g~~~k~WkkrwfvL~~~~L~yyk~~~---~~~~~~~I~L~~~~v~~~~~--~~k~~~F~I~~~~~~~~ 76 (96)
T cd01260 2 CDGWLWKRKKPGGFMGQKWARRWFVLKGTTLYWYRSKQ---DEKAEGLIFLSGFTIESAKE--VKKKYAFKVCHPVYKSF 76 (96)
T ss_pred ceeEEEEecCCCCccccCceeEEEEEECCEEEEECCCC---CCccceEEEccCCEEEEchh--cCCceEEEECCCCCcEE
Confidence 5899999965444 999999999999999999997 56689999999985543322 2578999999998 999
Q ss_pred EEEcCCHHHHHHHHHHHHHH
Q 032301 104 YFIADSEKEKEDWINSIGRS 123 (143)
Q Consensus 104 ~~~a~s~~e~~~W~~al~~~ 123 (143)
+|+|+|++++.+|+.||+.|
T Consensus 77 ~f~a~s~~e~~~Wi~ai~~~ 96 (96)
T cd01260 77 YFAAETLDDLSQWVNHLITA 96 (96)
T ss_pred EEEeCCHHHHHHHHHHHHhC
Confidence 99999999999999999764
No 5
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=99.89 E-value=4.7e-22 Score=124.20 Aligned_cols=94 Identities=20% Similarity=0.386 Sum_probs=77.9
Q ss_pred ceEEEEEEeCCCC-----CCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccC------CCcceEEE
Q 032301 28 ERSGWLTKQGEYI-----KTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVL------NKQYAFEL 96 (143)
Q Consensus 28 ~~~G~L~k~~~~~-----~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~------~~~~~f~i 96 (143)
+++|+|.|++... +.|++|||||+++.|+||+++... ...+.|.|+|..+..++...+.. .+.++|+|
T Consensus 1 ~k~g~l~Kr~~~~~~~~~~nwKkRwFvL~~~~L~Yyk~~~~~-~~~~kG~I~L~~~~~ve~~~~~~~~~~~~~~~~~F~i 79 (106)
T cd01238 1 ILESILVKRSQQKKKTSPLNYKERLFVLTKSKLSYYEGDFEK-RGSKKGSIDLSKIKCVETVKPEKNPPIPERFKYPFQV 79 (106)
T ss_pred CcceeeeeeccCCCCCCCCCceeEEEEEcCCEEEEECCCccc-ccCcceeEECCcceEEEEecCCcCcccccccCccEEE
Confidence 5789999996432 499999999999999999987632 24689999999987776544322 35789999
Q ss_pred EeCCeEEEEEcCCHHHHHHHHHHHHH
Q 032301 97 STRTETMYFIADSEKEKEDWINSIGR 122 (143)
Q Consensus 97 ~~~~~~~~~~a~s~~e~~~W~~al~~ 122 (143)
.++++++|+.|+|++|+++|+.||+.
T Consensus 80 ~t~~r~~yl~A~s~~er~~WI~ai~~ 105 (106)
T cd01238 80 VHDEGTLYVFAPTEELRKRWIKALKQ 105 (106)
T ss_pred EeCCCeEEEEcCCHHHHHHHHHHHHh
Confidence 99999999999999999999999975
No 6
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=99.88 E-value=9.6e-22 Score=121.13 Aligned_cols=92 Identities=29% Similarity=0.590 Sum_probs=78.4
Q ss_pred CCceEEEEEEeCCCCCCceeEEEEEECC------eEEEEecCCCC--CCCCcceEEeCCceEEeecCcccCCCcceEEEE
Q 032301 26 NPERSGWLTKQGEYIKTWRRRWFVLKQG------KLFWFKESTVT--RASKPRGVIPVASCLTVKGAEDVLNKQYAFELS 97 (143)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~r~~vL~~~------~l~~~~~~~~~--~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~ 97 (143)
+++++|||.|+ +.|++|||||++. .|.||+++..- ....|.++|+|+.|..+...++ ..++++|.|.
T Consensus 1 ~v~k~GyL~K~----K~~kkRwFVLr~~~~~~p~~Leyyk~ek~~~~~~~~p~~vI~L~~c~~v~~~~d-~k~~~~f~i~ 75 (101)
T cd01257 1 DVRKSGYLRKQ----KSMHKRFFVLRAESSGGPARLEYYENEKKFLQKGSAPKRVIPLESCFNINKRAD-AKHRHLIALY 75 (101)
T ss_pred CccEEEEEeEe----cCcEeEEEEEecCCCCCCceEEEECChhhccccCCCceEEEEccceEEEeeccc-cccCeEEEEE
Confidence 47899999997 6999999999977 79999998621 1256999999999988865544 2457999999
Q ss_pred eCCeEEEEEcCCHHHHHHHHHHHHH
Q 032301 98 TRTETMYFIADSEKEKEDWINSIGR 122 (143)
Q Consensus 98 ~~~~~~~~~a~s~~e~~~W~~al~~ 122 (143)
+++++++|.|+|++|+++|+.+|..
T Consensus 76 t~dr~f~l~aese~E~~~Wi~~i~~ 100 (101)
T cd01257 76 TRDEYFAVAAENEAEQDSWYQALLE 100 (101)
T ss_pred eCCceEEEEeCCHHHHHHHHHHHhh
Confidence 9999999999999999999999853
No 7
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.88 E-value=7.2e-22 Score=121.06 Aligned_cols=89 Identities=24% Similarity=0.501 Sum_probs=75.2
Q ss_pred eEEEEEEeCC--CCCCceeEEEEEEC--CeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCCeEEE
Q 032301 29 RSGWLTKQGE--YIKTWRRRWFVLKQ--GKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRTETMY 104 (143)
Q Consensus 29 ~~G~L~k~~~--~~~~w~~r~~vL~~--~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~~~~~ 104 (143)
++|||.|+++ ..+.|++|||||.+ ..|+||+++. +..|.+.|+|.++..+.... ..++.|.|.+++++|+
T Consensus 1 l~GyL~K~g~~~~~K~WkkRWFvL~~~~~~L~Yyk~~~---d~~p~G~I~L~~~~~~~~~~---~~~~~F~i~t~~r~y~ 74 (95)
T cd01265 1 LCGYLHKIEGKGPLRGRRSRWFALDDRTCYLYYYKDSQ---DAKPLGRVDLSGAAFTYDPR---EEKGRFEIHSNNEVIA 74 (95)
T ss_pred CcccEEEecCCCCCcCceeEEEEEcCCCcEEEEECCCC---cccccceEECCccEEEcCCC---CCCCEEEEEcCCcEEE
Confidence 3799999975 36899999999984 5799999987 56799999999975543322 2478999999999999
Q ss_pred EEcCCHHHHHHHHHHHHHH
Q 032301 105 FIADSEKEKEDWINSIGRS 123 (143)
Q Consensus 105 ~~a~s~~e~~~W~~al~~~ 123 (143)
|+|+|++|+++|+.||+.+
T Consensus 75 l~A~s~~e~~~Wi~al~~~ 93 (95)
T cd01265 75 LKASSDKQMNYWLQALQSK 93 (95)
T ss_pred EECCCHHHHHHHHHHHHhh
Confidence 9999999999999999875
No 8
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.88 E-value=1.3e-21 Score=120.93 Aligned_cols=91 Identities=26% Similarity=0.557 Sum_probs=74.4
Q ss_pred eEEEEEEeCC---------CCCCceeEEEEEEC-CeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEe
Q 032301 29 RSGWLTKQGE---------YIKTWRRRWFVLKQ-GKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELST 98 (143)
Q Consensus 29 ~~G~L~k~~~---------~~~~w~~r~~vL~~-~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~ 98 (143)
++|||.+.+. ..+.|++|||||.+ ..|+||++... ...|.++|+|+.|..|....+...+.++|.|.+
T Consensus 1 ~~g~l~~~~~~~~~~~~~~~~K~WkrRWFvL~~~~~L~y~~d~~~--~~~p~G~IdL~~~~~V~~~~~~~~~~~~f~I~t 78 (104)
T cd01236 1 YCGWLLVAPDGTDFDNPVHRSKRWQRRWFILYDHGLLTYALDEMP--TTLPQGTIDMNQCTDVVDAEARTGQKFSICILT 78 (104)
T ss_pred CcceeEEcCCCCcccccceeeccccceEEEEeCCCEEEEeeCCCC--CcccceEEEccceEEEeecccccCCccEEEEEC
Confidence 4799999853 24789999999985 56666655432 346899999999988876665556679999999
Q ss_pred CCeEEEEEcCCHHHHHHHHHHHH
Q 032301 99 RTETMYFIADSEKEKEDWINSIG 121 (143)
Q Consensus 99 ~~~~~~~~a~s~~e~~~W~~al~ 121 (143)
++++|||.|+|++|+++|+.+|.
T Consensus 79 p~R~f~l~Aete~E~~~Wi~~l~ 101 (104)
T cd01236 79 PDKEHFIKAETKEEISWWLNMLM 101 (104)
T ss_pred CCceEEEEeCCHHHHHHHHHHHH
Confidence 99999999999999999999985
No 9
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=99.87 E-value=4.2e-21 Score=119.02 Aligned_cols=92 Identities=29% Similarity=0.589 Sum_probs=77.4
Q ss_pred EEEEEEeCCCCCCceeEEEEEEC--CeEEEEecCCCCCCCCcceEEeCCceEEeecCcc------cCCCcceEEEEeCCe
Q 032301 30 SGWLTKQGEYIKTWRRRWFVLKQ--GKLFWFKESTVTRASKPRGVIPVASCLTVKGAED------VLNKQYAFELSTRTE 101 (143)
Q Consensus 30 ~G~L~k~~~~~~~w~~r~~vL~~--~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~------~~~~~~~f~i~~~~~ 101 (143)
+|||.|++...+.|++|||||.+ ..|.||+++. ...|.+.|+|..++.+..... .....+.|.|.++.+
T Consensus 2 ~G~L~K~g~~~k~WkkRwFvL~~~~~~L~Yy~~~~---~~~~~g~I~L~~~~~v~~~~~~~~~~~~~~~~~~f~i~t~~r 78 (101)
T cd01235 2 EGYLYKRGALLKGWKPRWFVLDPDKHQLRYYDDFE---DTAEKGCIDLAEVKSVNLAQPGMGAPKHTSRKGFFDLKTSKR 78 (101)
T ss_pred eEEEEEcCCCCCCccceEEEEECCCCEEEEecCCC---CCccceEEEcceeEEEeecCCCCCCCCCCCCceEEEEEeCCc
Confidence 79999999888999999999994 4899999887 567999999998776654221 113457799999999
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHH
Q 032301 102 TMYFIADSEKEKEDWINSIGRSI 124 (143)
Q Consensus 102 ~~~~~a~s~~e~~~W~~al~~~~ 124 (143)
+++|+|+|.+++.+|+.||+.++
T Consensus 79 ~~~~~a~s~~e~~~Wi~ai~~~i 101 (101)
T cd01235 79 TYNFLAENINEAQRWKEKIQQCI 101 (101)
T ss_pred eEEEECCCHHHHHHHHHHHHhhC
Confidence 99999999999999999998764
No 10
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt
Probab=99.86 E-value=1.1e-20 Score=114.71 Aligned_cols=89 Identities=28% Similarity=0.543 Sum_probs=75.5
Q ss_pred eEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCC-eEEEEEc
Q 032301 29 RSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRT-ETMYFIA 107 (143)
Q Consensus 29 ~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~-~~~~~~a 107 (143)
++|||.|.+...+.|++|||||.++.|.||+++... ...|.+.|+|..|..+.. + .+++.|.|.+.. ++++|.|
T Consensus 1 ~~G~L~K~~~~~k~Wk~RwFvL~~g~L~Yyk~~~~~-~~~~~G~I~L~~~~i~~~-~---~~~~~F~i~~~~~r~~~L~A 75 (91)
T cd01247 1 TNGVLSKWTNYINGWQDRYFVLKEGNLSYYKSEAEK-SHGCRGSIFLKKAIIAAH-E---FDENRFDISVNENVVWYLRA 75 (91)
T ss_pred CceEEEEeccccCCCceEEEEEECCEEEEEecCccC-cCCCcEEEECcccEEEcC-C---CCCCEEEEEeCCCeEEEEEe
Confidence 479999999999999999999999999999998743 235899999999755432 2 346899997666 9999999
Q ss_pred CCHHHHHHHHHHHHH
Q 032301 108 DSEKEKEDWINSIGR 122 (143)
Q Consensus 108 ~s~~e~~~W~~al~~ 122 (143)
+|++|+++|+.||+.
T Consensus 76 ~s~~e~~~Wi~al~~ 90 (91)
T cd01247 76 ENSQSRLLWMDSVVR 90 (91)
T ss_pred CCHHHHHHHHHHHhh
Confidence 999999999999974
No 11
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.86 E-value=1.6e-20 Score=120.66 Aligned_cols=96 Identities=39% Similarity=0.802 Sum_probs=80.1
Q ss_pred ceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCC-------
Q 032301 28 ERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRT------- 100 (143)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~------- 100 (143)
.++|||.|+++..+.|++|||||.++.|.||+++. ...+.+.|+|.++.+.. .++ ..++++|.|.+++
T Consensus 1 ~k~G~L~K~~~~~~~WkkRwfvL~~~~L~yyk~~~---~~~~~g~I~L~~~~v~~-~~~-~~~~~~F~i~~~~~~~~i~~ 75 (125)
T cd01252 1 DREGWLLKQGGRVKTWKRRWFILTDNCLYYFEYTT---DKEPRGIIPLENVSIRE-VED-PSKPFCFELFSPSDKQQIKA 75 (125)
T ss_pred CcEEEEEEeCCCCCCeEeEEEEEECCEEEEEcCCC---CCCceEEEECCCcEEEE-ccc-CCCCeeEEEECCcccccccc
Confidence 36899999998889999999999999999999987 56799999999875433 322 3578899988755
Q ss_pred --------------eEEEEEcCCHHHHHHHHHHHHHHHHhhC
Q 032301 101 --------------ETMYFIADSEKEKEDWINSIGRSIVQHS 128 (143)
Q Consensus 101 --------------~~~~~~a~s~~e~~~W~~al~~~~~~~~ 128 (143)
+.|+|+|+|.+|+.+|+.||+.++....
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~A~s~~e~~~Wi~al~~~~~~~~ 117 (125)
T cd01252 76 CKTESDGRVVEGNHSVYRISAANDEEMDEWIKSIKASISPNP 117 (125)
T ss_pred ccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhcCc
Confidence 4678999999999999999999987443
No 12
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=99.86 E-value=1.1e-20 Score=118.54 Aligned_cols=91 Identities=33% Similarity=0.583 Sum_probs=74.8
Q ss_pred EEEEEEeCC----CCCCceeEEEEEECCe-------EEEEecCCCCCCCCcceEEeCCceEEeecCc----ccCCCcceE
Q 032301 30 SGWLTKQGE----YIKTWRRRWFVLKQGK-------LFWFKESTVTRASKPRGVIPVASCLTVKGAE----DVLNKQYAF 94 (143)
Q Consensus 30 ~G~L~k~~~----~~~~w~~r~~vL~~~~-------l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~----~~~~~~~~f 94 (143)
+|||.|+++ ..+.|++|||||.+.. |.||+++. ...|.++|+|+.+..++... ......+.|
T Consensus 2 eGwL~K~~~~~~~~~~~WkrRwFvL~~~~l~~~~~~L~Yyk~~~---~~k~~g~I~L~~~~~v~~~~~~~~~~~~~~~~f 78 (108)
T cd01266 2 EGWLKKSPPYKLLFRTKWVRRYFVLHCGDRERNLFALEYYKTSR---KFKLEFVIDLESCSQVDPGLLCTAGNCIFGYGF 78 (108)
T ss_pred ceeeeeCCccccccccCcEEEEEEEeccccCCCcceEEEECCCC---CCccceEEECCccEEEcccccccccCcccceEE
Confidence 799999976 3459999999999876 59999887 56799999999987664421 112335789
Q ss_pred EEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 032301 95 ELSTRTETMYFIADSEKEKEDWINSIGRS 123 (143)
Q Consensus 95 ~i~~~~~~~~~~a~s~~e~~~W~~al~~~ 123 (143)
.|.++.++|+|.|+|++|+++|+.+|+..
T Consensus 79 ~i~t~~r~y~l~A~s~ee~~~Wi~~I~~~ 107 (108)
T cd01266 79 DIETIVRDLYLVAKNEEEMTLWVNCICKL 107 (108)
T ss_pred EEEeCCccEEEEECCHHHHHHHHHHHHhh
Confidence 99999999999999999999999999764
No 13
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.84 E-value=1.4e-19 Score=109.95 Aligned_cols=90 Identities=31% Similarity=0.718 Sum_probs=76.1
Q ss_pred eEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCC-eEEEEEc
Q 032301 29 RSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRT-ETMYFIA 107 (143)
Q Consensus 29 ~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~-~~~~~~a 107 (143)
++|||.++++..+.|++|||+|.++.|.||+++... ...+.+.+.|.++.... .+ ..+++|.|.+++ +.++|+|
T Consensus 1 ~~G~L~k~~~~~~~W~~r~~vl~~~~L~~~~~~~~~-~~~~~~~i~l~~~~~~~-~~---~~~~~F~i~~~~~~~~~~~a 75 (91)
T cd01246 1 VEGWLLKWTNYLKGWQKRWFVLDNGLLSYYKNKSSM-RGKPRGTILLSGAVISE-DD---SDDKCFTIDTGGDKTLHLRA 75 (91)
T ss_pred CeEEEEEecccCCCceeeEEEEECCEEEEEecCccC-CCCceEEEEeceEEEEE-CC---CCCcEEEEEcCCCCEEEEEC
Confidence 589999998777899999999999999999999732 12689999999975332 21 347999999988 9999999
Q ss_pred CCHHHHHHHHHHHHHH
Q 032301 108 DSEKEKEDWINSIGRS 123 (143)
Q Consensus 108 ~s~~e~~~W~~al~~~ 123 (143)
+|.+|+.+|+.||+.|
T Consensus 76 ~s~~e~~~Wi~al~~a 91 (91)
T cd01246 76 NSEEERQRWVDALELA 91 (91)
T ss_pred CCHHHHHHHHHHHHhC
Confidence 9999999999999764
No 14
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.83 E-value=1.7e-19 Score=110.17 Aligned_cols=92 Identities=33% Similarity=0.637 Sum_probs=76.0
Q ss_pred eEEEEEEeCCC-CCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCCeEEEEEc
Q 032301 29 RSGWLTKQGEY-IKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRTETMYFIA 107 (143)
Q Consensus 29 ~~G~L~k~~~~-~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~~~~~~~a 107 (143)
++|||.++++. .+.|++|||+|.++.|.||+++... ...+.+.|+|..+. +...+....++++|.|.+++++++|+|
T Consensus 1 k~G~L~kk~~~~~~~W~kr~~~L~~~~l~~y~~~~~~-~~~~~~~i~l~~~~-v~~~~~~~~~~~~f~i~~~~~~~~f~a 78 (94)
T cd01250 1 KQGYLYKRSSKSNKEWKKRWFVLKNGQLTYHHRLKDY-DNAHVKEIDLRRCT-VRHNGKQPDRRFCFEVISPTKTWHFQA 78 (94)
T ss_pred CcceEEEECCCcCCCceEEEEEEeCCeEEEEcCCccc-ccccceEEeccceE-EecCccccCCceEEEEEcCCcEEEEEC
Confidence 57999998754 6899999999999999999988732 24577889998864 444433324789999999999999999
Q ss_pred CCHHHHHHHHHHHHH
Q 032301 108 DSEKEKEDWINSIGR 122 (143)
Q Consensus 108 ~s~~e~~~W~~al~~ 122 (143)
+|.+++.+|+.||+.
T Consensus 79 ~s~~~~~~Wi~al~~ 93 (94)
T cd01250 79 DSEEERDDWISAIQE 93 (94)
T ss_pred CCHHHHHHHHHHHhc
Confidence 999999999999974
No 15
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=99.82 E-value=1.1e-18 Score=107.67 Aligned_cols=98 Identities=33% Similarity=0.692 Sum_probs=83.5
Q ss_pred CceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcc----cCCCcceEEEEeCCe-
Q 032301 27 PERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAED----VLNKQYAFELSTRTE- 101 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~----~~~~~~~f~i~~~~~- 101 (143)
++++|||.+++...+.|+++||+|.++.|.+|+++.......+.+.|+|.++........ .....++|.|.++.+
T Consensus 1 ~~~~G~L~~~~~~~~~wk~r~~vL~~~~L~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~~~~f~i~~~~~~ 80 (104)
T PF00169_consen 1 CIKEGWLLKKSSSRKKWKKRYFVLRDSYLLYYKSSKDKSDSKPKGSIPLDDCTVRPDPSSDFLSNKKRKNCFEITTPNGK 80 (104)
T ss_dssp EEEEEEEEEEESSSSSEEEEEEEEETTEEEEESSTTTTTESSESEEEEGTTEEEEEETSSTSTSTSSSSSEEEEEETTSE
T ss_pred CEEEEEEEEECCCCCCeEEEEEEEECCEEEEEecCccccceeeeEEEEecCceEEEcCccccccccCCCcEEEEEeCCCc
Confidence 468999999987788999999999999999999987433567999999999854443332 246789999999986
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHH
Q 032301 102 TMYFIADSEKEKEDWINSIGRSI 124 (143)
Q Consensus 102 ~~~~~a~s~~e~~~W~~al~~~~ 124 (143)
.++|+|+|.+++..|+.+|+.++
T Consensus 81 ~~~~~~~s~~~~~~W~~~i~~~~ 103 (104)
T PF00169_consen 81 SYLFSAESEEERKRWIQAIQKAI 103 (104)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999886
No 16
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.81 E-value=7.2e-19 Score=107.77 Aligned_cols=79 Identities=20% Similarity=0.410 Sum_probs=68.5
Q ss_pred CCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcc-cCCCcceEEEEeCCeEEEEEcCCHHHHHHHHH
Q 032301 40 IKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAED-VLNKQYAFELSTRTETMYFIADSEKEKEDWIN 118 (143)
Q Consensus 40 ~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~-~~~~~~~f~i~~~~~~~~~~a~s~~e~~~W~~ 118 (143)
...|++|||+|++..|+||+++. ..+.++|+|..+..++...+ .....++|+|.++++++|++|+|+.|+++|+.
T Consensus 18 ~~n~KkRwF~Lt~~~L~Y~k~~~----~~~~g~I~L~~i~~ve~v~~~~~~~~~~fqivt~~r~~yi~a~s~~E~~~Wi~ 93 (98)
T cd01244 18 VLHFKKRYFQLTTTHLSWAKDVQ----CKKSALIKLAAIKGTEPLSDKSFVNVDIITIVCEDDTMQLQFEAPVEATDWLN 93 (98)
T ss_pred CcCCceeEEEECCCEEEEECCCC----CceeeeEEccceEEEEEcCCcccCCCceEEEEeCCCeEEEECCCHHHHHHHHH
Confidence 36899999999999999999874 46899999999877765543 23457899999999999999999999999999
Q ss_pred HHHH
Q 032301 119 SIGR 122 (143)
Q Consensus 119 al~~ 122 (143)
||+.
T Consensus 94 al~k 97 (98)
T cd01244 94 ALEK 97 (98)
T ss_pred HHhc
Confidence 9975
No 17
>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.81 E-value=2.7e-19 Score=109.33 Aligned_cols=89 Identities=21% Similarity=0.422 Sum_probs=74.5
Q ss_pred EEEEEEeCCC-CCCceeEEEEEEC----CeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCCe--E
Q 032301 30 SGWLTKQGEY-IKTWRRRWFVLKQ----GKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRTE--T 102 (143)
Q Consensus 30 ~G~L~k~~~~-~~~w~~r~~vL~~----~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~~--~ 102 (143)
.|||.|+++. .+.|++|||+|.+ +.|+||+++. ...|.+.|+|..+.+....+...+++++|+|.++.+ +
T Consensus 2 ~G~l~K~g~~~~K~wK~rwF~l~~~~s~~~l~yf~~~~---~~~p~gli~l~~~~V~~v~ds~~~r~~cFel~~~~~~~~ 78 (98)
T cd01245 2 KGNLLKRTKSVTKLWKTLYFALILDGSRSHESLLSSPK---KTKPIGLIDLSDAYLYPVHDSLFGRPNCFQIVERALPTV 78 (98)
T ss_pred CCccccCCCCcccccceeEEEEecCCCCceEEEEcCCC---CCCccceeeccccEEEEccccccCCCeEEEEecCCCCeE
Confidence 5899999876 7999999999986 8999999988 456999999999844444444457799999999986 6
Q ss_pred EEEEcCCHHHHHHHHHHHHH
Q 032301 103 MYFIADSEKEKEDWINSIGR 122 (143)
Q Consensus 103 ~~~~a~s~~e~~~W~~al~~ 122 (143)
|+++|++ +|+++||++|+.
T Consensus 79 y~~~a~~-~er~~Wi~~l~~ 97 (98)
T cd01245 79 YYSCRSS-EERDKWIESLQA 97 (98)
T ss_pred EEEeCCH-HHHHHHHHHHhc
Confidence 7777777 999999999975
No 18
>cd01241 PH_Akt Akt pleckstrin homology (PH) domain. Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.78 E-value=5.6e-18 Score=105.09 Aligned_cols=92 Identities=32% Similarity=0.580 Sum_probs=66.1
Q ss_pred CceEEEEEEeCCCCCCceeEEEEEE-CCeEEEEecCCCCCCCCcceEEeCCceEE----eecCcccCCCcceEEEEeCC-
Q 032301 27 PERSGWLTKQGEYIKTWRRRWFVLK-QGKLFWFKESTVTRASKPRGVIPVASCLT----VKGAEDVLNKQYAFELSTRT- 100 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~-~~~l~~~~~~~~~~~~~~~~~i~l~~~~~----v~~~~~~~~~~~~f~i~~~~- 100 (143)
++++|||.|+++..+.|++|||+|. ++.|.||++... ..+.+.++|.+... +...+ ..+++.|.|...+
T Consensus 1 v~k~G~L~K~g~~~~~Wk~R~f~L~~~~~l~~yk~~~~---~~~~~~i~l~~~~v~~~~~~~~~--~~~~~~F~i~~~~~ 75 (102)
T cd01241 1 VVKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKEKPE---DGDPFLPPLNNFSVAECQLMKTE--RPRPNTFIIRCLQW 75 (102)
T ss_pred CcEEEEEEeecCCCCCCeeEEEEEeCCCeEEEEecCCC---ccCccccccCCeEEeeeeeeecc--CCCcceEEEEeccC
Confidence 4789999999998999999999999 778888887652 22335566665432 11111 2556899997211
Q ss_pred ---eEEEEEcCCHHHHHHHHHHHHHH
Q 032301 101 ---ETMYFIADSEKEKEDWINSIGRS 123 (143)
Q Consensus 101 ---~~~~~~a~s~~e~~~W~~al~~~ 123 (143)
...+|+|+|++|+++|+.||+.+
T Consensus 76 ~~~~~r~f~a~s~ee~~eWi~ai~~v 101 (102)
T cd01241 76 TTVIERTFHVESPEEREEWIHAIQTV 101 (102)
T ss_pred CcccCEEEEeCCHHHHHHHHHHHHhh
Confidence 11256799999999999999865
No 19
>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain. Anillin Pleckstrin homology (PH) domain. Anillin is an actin binding protein involved in cytokinesis. It has a C-terminal PH domain, which has been shown to be necessary, but not sufficient for targetting of anillin to ectopic septin containing foci . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.76 E-value=1.8e-17 Score=105.12 Aligned_cols=96 Identities=25% Similarity=0.593 Sum_probs=75.2
Q ss_pred ceEEEEEE-e-CCCCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecC--c-ccCCCcceEEEEeC--C
Q 032301 28 ERSGWLTK-Q-GEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGA--E-DVLNKQYAFELSTR--T 100 (143)
Q Consensus 28 ~~~G~L~k-~-~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~--~-~~~~~~~~f~i~~~--~ 100 (143)
.+.|||.. + .+..+.|++|||||.|+.|.||+.+.......|++.|+|.+|...... + +...+++.|.|... .
T Consensus 2 ~~~GfL~~~q~~~~~k~W~RRWFvL~g~~L~y~k~p~d~~~~~Plg~I~L~~c~~~~v~~~~r~~c~Rp~tF~i~~~~~~ 81 (122)
T cd01263 2 EYHGFLTMFEDTSGFGAWHRRWCALEGGEIKYWKYPDDEKRKGPTGLIDLSTCTSSEGASAVRDICARPNTFHLDVWRPK 81 (122)
T ss_pred ccceeEEEEeccCCCCCceEEEEEEeCCEEEEEcCCCccccCCceEEEEhhhCcccccccCChhhcCCCCeEEEEEeccc
Confidence 56899986 3 346689999999999999999998875434679999999998765442 1 34678999999642 1
Q ss_pred -----------------eE-EEEEcCCHHHHHHHHHHHHHH
Q 032301 101 -----------------ET-MYFIADSEKEKEDWINSIGRS 123 (143)
Q Consensus 101 -----------------~~-~~~~a~s~~e~~~W~~al~~~ 123 (143)
++ ++|+|+|.+|+++|+.||+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~r~~~~lsaDt~eer~~W~~ain~~ 122 (122)
T cd01263 82 METDDETLVSQCRRGIERLRVMLSADTKEERQTWLSLLNST 122 (122)
T ss_pred ccccccceeeccCCceeEEEEEEecCCHHHHHHHHHHHhcC
Confidence 22 678899999999999999753
No 20
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.74 E-value=1.6e-16 Score=98.37 Aligned_cols=97 Identities=22% Similarity=0.301 Sum_probs=79.1
Q ss_pred CceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCC--CCCCcceEEeCCceEEeecCcccCCCcceEEEEeCCeEEE
Q 032301 27 PERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVT--RASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRTETMY 104 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~--~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~~~~~ 104 (143)
.+++|||.|.+...+.|++|||+|.++.|.|++..... ..-.+...++|.++.+.+. + ....+|+|.|..+.++++
T Consensus 2 ~ikeG~L~K~~~~~~~~k~RyffLFnd~Ll~~~~~~~~~~~~y~~~~~i~l~~~~v~~~-~-~~~~~~~F~I~~~~rsf~ 79 (101)
T cd01219 2 LLKEGSVLKISSTTEKTEERYLFLFNDLLLYCVPRKMIGGSKFKVRARIDVSGMQVCEG-D-NLERPHSFLVSGKQRCLE 79 (101)
T ss_pred cccceEEEEEecCCCCceeEEEEEeCCEEEEEEcccccCCCcEEEEEEEecccEEEEeC-C-CCCcCceEEEecCCcEEE
Confidence 47899999998877899999999999999998854211 1224567899999755433 2 235689999999999999
Q ss_pred EEcCCHHHHHHHHHHHHHHHH
Q 032301 105 FIADSEKEKEDWINSIGRSIV 125 (143)
Q Consensus 105 ~~a~s~~e~~~W~~al~~~~~ 125 (143)
++|+|++|+.+|+.||+.++.
T Consensus 80 l~A~s~eEk~~W~~ai~~~i~ 100 (101)
T cd01219 80 LQARTQKEKNDWVQAIFSIID 100 (101)
T ss_pred EEcCCHHHHHHHHHHHHHHhh
Confidence 999999999999999999885
No 21
>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.72 E-value=3.4e-16 Score=98.78 Aligned_cols=99 Identities=22% Similarity=0.337 Sum_probs=77.0
Q ss_pred eEEEEEEeC------C----CCCCceeEEEEEECCeEEEEecCCCCCC----CCcceEEeCCceEEeecCcccCCCcceE
Q 032301 29 RSGWLTKQG------E----YIKTWRRRWFVLKQGKLFWFKESTVTRA----SKPRGVIPVASCLTVKGAEDVLNKQYAF 94 (143)
Q Consensus 29 ~~G~L~k~~------~----~~~~w~~r~~vL~~~~l~~~~~~~~~~~----~~~~~~i~l~~~~~v~~~~~~~~~~~~f 94 (143)
++|+|.++- . ..+.|+++||||.++.|++|+++..... ......|.|.+++. ....+..+++++|
T Consensus 2 ~~g~l~RK~~~~~~~kk~~~~~R~Wk~~y~vL~g~~L~~yKDe~~~~~~~~~~~~~~~Isi~~a~~-~ia~dy~Kr~~VF 80 (117)
T cd01230 2 KHGALMRKVHADPDCRKTPFGKRSWKMFYGILRGLVLYLQKDEHKPGKSLSETELKNAISIHHALA-TRASDYSKKPHVF 80 (117)
T ss_pred CCcEEEEEEEecCCCccCCCCCCcceEEEEEEECCEEEEEccCcccccccccccccceEEecccee-EeeccccCCCcEE
Confidence 578887761 1 2368999999999999999999862111 23457888888652 2333456899999
Q ss_pred EEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhhC
Q 032301 95 ELSTRT-ETMYFIADSEKEKEDWINSIGRSIVQHS 128 (143)
Q Consensus 95 ~i~~~~-~~~~~~a~s~~e~~~W~~al~~~~~~~~ 128 (143)
.|.+++ +.++|+|.+.+||+.|+.+|+.+++...
T Consensus 81 ~L~~~~g~~~lfqA~~~ee~~~Wi~~I~~~~~~~s 115 (117)
T cd01230 81 RLRTADWREFLFQTSSLKELQSWIERINVVAAAFS 115 (117)
T ss_pred EEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHhcc
Confidence 999987 8899999999999999999999887543
No 22
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain. Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.70 E-value=4.6e-16 Score=96.87 Aligned_cols=92 Identities=21% Similarity=0.375 Sum_probs=68.0
Q ss_pred eEEEEEEeC--------CCCCCceeEEEEEECCeEEEEecCCCCCCCCcce--EEeCCceEEeecCcccCCCcceEEEEe
Q 032301 29 RSGWLTKQG--------EYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRG--VIPVASCLTVKGAEDVLNKQYAFELST 98 (143)
Q Consensus 29 ~~G~L~k~~--------~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~--~i~l~~~~~v~~~~~~~~~~~~f~i~~ 98 (143)
++|+|.++. ...+.|+++||+|.++.|++|+++... ...+.+ .|++.++. +...++..+++++|.|..
T Consensus 1 ~~g~l~rk~~~~~~g~~~~~~~Wk~r~~vL~~~~L~~ykd~~~~-~~~~~~~~~i~l~~~~-i~~~~~~~k~~~~F~l~~ 78 (104)
T cd01253 1 MEGSLERKHELESGGKKASNRSWDNVYGVLCGQSLSFYKDEKMA-AENVHGEPPVDLTGAQ-CEVASDYTKKKHVFRLRL 78 (104)
T ss_pred CCceEeEEEEeecCCcccCCCCcceEEEEEeCCEEEEEecCccc-ccCCCCCCcEeccCCE-EEecCCcccCceEEEEEe
Confidence 468887541 135689999999999999999987632 111222 66776653 333333446789999987
Q ss_pred CC-eEEEEEcCCHHHHHHHHHHHHH
Q 032301 99 RT-ETMYFIADSEKEKEDWINSIGR 122 (143)
Q Consensus 99 ~~-~~~~~~a~s~~e~~~W~~al~~ 122 (143)
++ +.++|+|+|++++.+|+.||+.
T Consensus 79 ~~~~~~~f~a~s~e~~~~Wi~aL~~ 103 (104)
T cd01253 79 PDGAEFLFQAPDEEEMSSWVRALKS 103 (104)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhc
Confidence 66 8999999999999999999975
No 23
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.68 E-value=5.2e-16 Score=99.00 Aligned_cols=79 Identities=18% Similarity=0.494 Sum_probs=66.3
Q ss_pred CceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcc-----------cCCCcceEEEEeCCeEEEEEcCCH
Q 032301 42 TWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAED-----------VLNKQYAFELSTRTETMYFIADSE 110 (143)
Q Consensus 42 ~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~-----------~~~~~~~f~i~~~~~~~~~~a~s~ 110 (143)
.|++|||+|++..|.||+++. +..+.++|.++....+..... .....++|.|.++++++.|.|+|+
T Consensus 32 ~w~kRWFvlr~s~L~Y~~~~~---~~~~~~vil~D~~f~v~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~R~~~l~a~s~ 108 (121)
T cd01254 32 RWQKRWFIVKESFLAYMDDPS---SAQILDVILFDVDFKVNGGGKEDISLAVELKDITGLRHGLKITNSNRSLKLKCKSS 108 (121)
T ss_pred CCcceeEEEeCCEEEEEcCCC---CCceeeEEEEcCCccEEeCCcccccccccccccCCCceEEEEEcCCcEEEEEeCCH
Confidence 699999999999999999987 557999999986444443221 235679999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 032301 111 KEKEDWINSIGRS 123 (143)
Q Consensus 111 ~e~~~W~~al~~~ 123 (143)
.++.+|+.+|+.|
T Consensus 109 ~~~~~Wi~~i~~a 121 (121)
T cd01254 109 RKLKQWMASIEDA 121 (121)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999864
No 24
>KOG0930 consensus Guanine nucleotide exchange factor Cytohesin, contains PH and Sec7 domains [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.67 E-value=7.4e-16 Score=108.43 Aligned_cols=95 Identities=40% Similarity=0.793 Sum_probs=79.5
Q ss_pred CCceEEEEEEeCC-CCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCC----
Q 032301 26 NPERSGWLTKQGE-YIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRT---- 100 (143)
Q Consensus 26 ~~~~~G~L~k~~~-~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~---- 100 (143)
.+..+|||.|.++ ..+.|++|||+|+++-|+||.-.. +..|.+.|+|....+- ..++ .++++||.|..++
T Consensus 259 npdREGWLlKlgg~rvktWKrRWFiLtdNCLYYFe~tT---DKEPrGIIpLeNlsir-~Ved-P~kP~cfEly~ps~~gq 333 (395)
T KOG0930|consen 259 NPDREGWLLKLGGNRVKTWKRRWFILTDNCLYYFEYTT---DKEPRGIIPLENLSIR-EVED-PKKPNCFELYIPSNKGQ 333 (395)
T ss_pred CccccceeeeecCCcccchhheeEEeecceeeeeeecc---CCCCCcceecccccee-eccC-CCCCCeEEEecCCCCcC
Confidence 5778999999976 568999999999999999999877 6789999999985433 3332 3789999988653
Q ss_pred ------------------eEEEEEcCCHHHHHHHHHHHHHHHH
Q 032301 101 ------------------ETMYFIADSEKEKEDWINSIGRSIV 125 (143)
Q Consensus 101 ------------------~~~~~~a~s~~e~~~W~~al~~~~~ 125 (143)
..|.++|.+.+|+.+|+.+|+.++.
T Consensus 334 ~IKACKTe~DGRvVEG~H~vYrIsA~~~Ee~~~Wi~sI~a~is 376 (395)
T KOG0930|consen 334 VIKACKTEADGRVVEGNHSVYRISAPTPEEKDEWIKSIKAAIS 376 (395)
T ss_pred eeeeecccCCceeEeccceEEEeeCCCHHHHHHHHHHHHHHhc
Confidence 1588999999999999999998887
No 25
>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain. Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.66 E-value=2e-15 Score=92.57 Aligned_cols=85 Identities=16% Similarity=0.448 Sum_probs=69.2
Q ss_pred CCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCC----eEEEEEcCCHHHHH
Q 032301 39 YIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRT----ETMYFIADSEKEKE 114 (143)
Q Consensus 39 ~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~----~~~~~~a~s~~e~~ 114 (143)
..+.|++|||+|.+..|+||++.+.. ...|...+.+.+|.+... ....++++++.+.+|. ++|+|.|+|+++..
T Consensus 16 ~~K~~KrrwF~lk~~~L~YyK~kee~-~~~p~i~lnl~gcev~~d-v~~~~~kf~I~l~~ps~~~~r~y~l~cdsEeqya 93 (106)
T cd01237 16 TLKGYKQYWFTFRDTSISYYKSKEDS-NGAPIGQLNLKGCEVTPD-VNVAQQKFHIKLLIPTAEGMNEVWLRCDNEKQYA 93 (106)
T ss_pred hhhhheeEEEEEeCCEEEEEccchhc-CCCCeEEEecCceEEccc-ccccccceEEEEecCCccCCeEEEEECCCHHHHH
Confidence 34689999999999999999987743 467888888999865433 2223557889988876 89999999999999
Q ss_pred HHHHHHHHHHH
Q 032301 115 DWINSIGRSIV 125 (143)
Q Consensus 115 ~W~~al~~~~~ 125 (143)
+|+.|++.|..
T Consensus 94 ~Wmaa~rlas~ 104 (106)
T cd01237 94 KWMAACRLASK 104 (106)
T ss_pred HHHHHHHHhhC
Confidence 99999998864
No 26
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=99.66 E-value=1e-14 Score=88.72 Aligned_cols=96 Identities=31% Similarity=0.676 Sum_probs=79.2
Q ss_pred ceEEEEEEeCC-CCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCccc--CCCcceEEEEeCCe-EE
Q 032301 28 ERSGWLTKQGE-YIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDV--LNKQYAFELSTRTE-TM 103 (143)
Q Consensus 28 ~~~G~L~k~~~-~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~--~~~~~~f~i~~~~~-~~ 103 (143)
+++|||.++.. ....|+++||+|.++.|.+|+.........+...++|.++. +...... ....++|.|..+.+ .+
T Consensus 2 ~~~G~l~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~~~~~~~i~l~~~~-v~~~~~~~~~~~~~~f~l~~~~~~~~ 80 (102)
T smart00233 2 IKEGWLYKKSGGKKKSWKKRYFVLFNSTLLYYKSEKAKKDYKPKGSIDLSGIT-VREAPDPDSAKKPHCFEIKTADRRSY 80 (102)
T ss_pred ceeEEEEEeCCCccCCceEEEEEEECCEEEEEeCCCccccCCCceEEECCcCE-EEeCCCCccCCCceEEEEEecCCceE
Confidence 68999999876 56899999999999999999988743225788999999974 4333332 24689999999887 99
Q ss_pred EEEcCCHHHHHHHHHHHHHHH
Q 032301 104 YFIADSEKEKEDWINSIGRSI 124 (143)
Q Consensus 104 ~~~a~s~~e~~~W~~al~~~~ 124 (143)
+|.|+|.+++..|+.+|+.++
T Consensus 81 ~f~~~s~~~~~~W~~~i~~~~ 101 (102)
T smart00233 81 LLQAESEEEREEWVDALRKAI 101 (102)
T ss_pred EEEcCCHHHHHHHHHHHHHhh
Confidence 999999999999999998775
No 27
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.64 E-value=1.2e-14 Score=89.44 Aligned_cols=96 Identities=21% Similarity=0.309 Sum_probs=71.1
Q ss_pred CceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCC-CCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCCeEEEE
Q 032301 27 PERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKEST-VTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRTETMYF 105 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~-~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~~~~~~ 105 (143)
.+++|+|.|..+. +. ++|+|.|-.+.|.|+.... ....-.+.+.++|.++. |+..++....+|+|+|..+.+++.+
T Consensus 2 ~ikEG~L~K~~~k-~~-~~R~~FLFnD~LlY~~~~~~~~~~y~~~~~i~L~~~~-V~~~~~~~~~~~~F~I~~~~ks~~l 78 (99)
T cd01220 2 FIRQGCLLKLSKK-GL-QQRMFFLFSDLLLYTSKSPTDQNSFRILGHLPLRGML-TEESEHEWGVPHCFTIFGGQCAITV 78 (99)
T ss_pred eeeEEEEEEEeCC-CC-ceEEEEEccceEEEEEeecCCCceEEEEEEEEcCceE-EeeccCCcCCceeEEEEcCCeEEEE
Confidence 4789999998642 34 4456666666666665432 11122478999999975 4443433356899999999999999
Q ss_pred EcCCHHHHHHHHHHHHHHHH
Q 032301 106 IADSEKEKEDWINSIGRSIV 125 (143)
Q Consensus 106 ~a~s~~e~~~W~~al~~~~~ 125 (143)
+|.|++|+.+|+.+|+.++.
T Consensus 79 ~A~s~~Ek~~Wi~~i~~aI~ 98 (99)
T cd01220 79 AASTRAEKEKWLADLSKAIA 98 (99)
T ss_pred ECCCHHHHHHHHHHHHHHhh
Confidence 99999999999999999985
No 28
>PF15409 PH_8: Pleckstrin homology domain
Probab=99.63 E-value=9.2e-15 Score=87.40 Aligned_cols=85 Identities=25% Similarity=0.621 Sum_probs=71.1
Q ss_pred EEEEEe-CCCCCCceeEEEEE--ECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCCeEEEEEc
Q 032301 31 GWLTKQ-GEYIKTWRRRWFVL--KQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRTETMYFIA 107 (143)
Q Consensus 31 G~L~k~-~~~~~~w~~r~~vL--~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~~~~~~~a 107 (143)
|||.|+ ....+.|++|||+| ..+.|.||.++. +....+.|++..+ .+... .+...|.|.+....++|.|
T Consensus 1 G~llKkrr~~lqG~~kRyFvL~~~~G~LsYy~~~~---~~~~rGsi~v~~a-~is~~----~~~~~I~idsg~~i~hLKa 72 (89)
T PF15409_consen 1 GWLLKKRRKPLQGWHKRYFVLDFEKGTLSYYRNQN---SGKLRGSIDVSLA-VISAN----KKSRRIDIDSGDEIWHLKA 72 (89)
T ss_pred CcceeeccccCCCceeEEEEEEcCCcEEEEEecCC---CCeeEeEEEccce-EEEec----CCCCEEEEEcCCeEEEEEc
Confidence 788877 44678999999999 899999999886 4467899999986 33322 3457899999999999999
Q ss_pred CCHHHHHHHHHHHHHH
Q 032301 108 DSEKEKEDWINSIGRS 123 (143)
Q Consensus 108 ~s~~e~~~W~~al~~~ 123 (143)
.|+++.+.|+.||+.|
T Consensus 73 ~s~~~f~~Wv~aL~~a 88 (89)
T PF15409_consen 73 KSQEDFQRWVSALQKA 88 (89)
T ss_pred CCHHHHHHHHHHHHhc
Confidence 9999999999999875
No 29
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=99.63 E-value=6.8e-15 Score=92.65 Aligned_cols=95 Identities=23% Similarity=0.465 Sum_probs=56.3
Q ss_pred eEEEEEEeCCC-CCCceeEEEEEE-CCeEEEEecCCCCC----------CCCcceEEeCC----ceEEeec-CcccCCCc
Q 032301 29 RSGWLTKQGEY-IKTWRRRWFVLK-QGKLFWFKESTVTR----------ASKPRGVIPVA----SCLTVKG-AEDVLNKQ 91 (143)
Q Consensus 29 ~~G~L~k~~~~-~~~w~~r~~vL~-~~~l~~~~~~~~~~----------~~~~~~~i~l~----~~~~v~~-~~~~~~~~ 91 (143)
++|+|+|.+.. .+.|++|||+|. ++.|.||+.+.... .....+..... ....+.. .+......
T Consensus 1 k~G~l~K~~~~~~kgWk~RwFiL~k~~~L~YyK~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (112)
T PF15413_consen 1 KEGYLYKWGNKFGKGWKKRWFILRKDGVLSYYKIPRDKKDVRIIGEESSRVIRKGDWSISRRSSRIQGIKDKNPFGEIHL 80 (112)
T ss_dssp EEEEEEE--TTS-S--EEEEEEEE-TTEEEEESS-------------TT-SB-SEEEE---GGGT-EEEES-T--SS-SS
T ss_pred CCceEEEecCCCCcCccccEEEEEeCCEEEEeecccccccccccccchhceEeecccCcccccccccccccCCcccCcCC
Confidence 58999999775 899999999999 99999999943210 11122222211 1111110 01111225
Q ss_pred ceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 032301 92 YAFELSTRTETMYFIADSEKEKEDWINSIGRS 123 (143)
Q Consensus 92 ~~f~i~~~~~~~~~~a~s~~e~~~W~~al~~~ 123 (143)
..|.|.++.++++|.|++.+|..+|+.||++|
T Consensus 81 ~~~~i~T~~kt~~l~~~t~~d~~~Wi~aL~~~ 112 (112)
T PF15413_consen 81 KVFSIFTPTKTFHLRCETREDRYDWIEALQEA 112 (112)
T ss_dssp EEEEEE-SS-EEEEEESSHHHHHHHHHHHHH-
T ss_pred CCcEEECCCcEEEEEECCHHHHHHHHHHHHhC
Confidence 78889999999999999999999999999875
No 30
>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain. Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.60 E-value=2.6e-14 Score=85.64 Aligned_cols=94 Identities=19% Similarity=0.377 Sum_probs=75.5
Q ss_pred CceEEEEEEeCC--CCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCC----
Q 032301 27 PERSGWLTKQGE--YIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRT---- 100 (143)
Q Consensus 27 ~~~~G~L~k~~~--~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~---- 100 (143)
++..|||..... ..+.-+++||||+.+.|+||++.+ +.++.++|+|.+...-.......+++|+|.|..++
T Consensus 1 virkgwl~~~n~~~m~ggsK~~WFVLt~~~L~wykd~e---eKE~kyilpLdnLk~Rdve~gf~sk~~~FeLfnpd~rnv 77 (110)
T cd01256 1 VIRKGWLSISNVGIMKGGSKDYWFVLTSESLSWYKDDE---EKEKKYMLPLDGLKLRDIEGGFMSRNHKFALFYPDGRNV 77 (110)
T ss_pred CeeeeeEEeeccceecCCCcceEEEEecceeeeecccc---cccccceeeccccEEEeecccccCCCcEEEEEcCccccc
Confidence 477899987643 234569999999999999999998 67899999999864444444456788999999765
Q ss_pred ----eEEEEEcCCHHHHHHHHHHHHHH
Q 032301 101 ----ETMYFIADSEKEKEDWINSIGRS 123 (143)
Q Consensus 101 ----~~~~~~a~s~~e~~~W~~al~~~ 123 (143)
+++-+.|++++++..|.+.+-+|
T Consensus 78 ykd~k~lel~~~~~e~vdswkasflra 104 (110)
T cd01256 78 YKDYKQLELGCETLEEVDSWKASFLRA 104 (110)
T ss_pred ccchheeeecCCCHHHHHHHHHHHHhc
Confidence 56889999999999998877443
No 31
>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A.
Probab=99.60 E-value=4e-14 Score=90.10 Aligned_cols=95 Identities=26% Similarity=0.569 Sum_probs=64.6
Q ss_pred eEEEEEEe------C--C--CCCCceeEEEEEECCeEEEEecCCC-----C------CCCCcceEEeCCceEEeecCccc
Q 032301 29 RSGWLTKQ------G--E--YIKTWRRRWFVLKQGKLFWFKESTV-----T------RASKPRGVIPVASCLTVKGAEDV 87 (143)
Q Consensus 29 ~~G~L~k~------~--~--~~~~w~~r~~vL~~~~l~~~~~~~~-----~------~~~~~~~~i~l~~~~~v~~~~~~ 87 (143)
++|+|.++ + . ..+.|+..|+||++..|++|++... . ....|...|.|..+.... ..+.
T Consensus 2 keG~l~RK~~~~~~gkk~~~~~R~Wk~~y~vL~g~~L~~~k~~~~~~~~~~~~~~~~~~~~p~~~i~L~~a~a~~-a~dY 80 (119)
T PF15410_consen 2 KEGILMRKHELESGGKKASRSKRSWKQVYAVLQGGQLYFYKDEKSPASSTPPDIQSVENAKPDSSISLHHALAEI-ASDY 80 (119)
T ss_dssp -EEEEEEEEEEECTTCC---S---EEEEEEEEETTEEEEESSHHHHCCT-BS---SS--E-----EE-TT-EEEE-ETTB
T ss_pred ceEEEEEEEEEcCCCCCcCCCCCCccEEeEEEECCEEEEEccCcccccCCcccccccccCcceeEEEecceEEEe-Cccc
Confidence 68999876 1 1 3468999999999999999998431 0 012245669999875544 5567
Q ss_pred CCCcceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHH
Q 032301 88 LNKQYAFELSTRT-ETMYFIADSEKEKEDWINSIGRSI 124 (143)
Q Consensus 88 ~~~~~~f~i~~~~-~~~~~~a~s~~e~~~W~~al~~~~ 124 (143)
.+++|+|.|.+++ ..++|+|.|.+||.+||.+|+.+.
T Consensus 81 ~Kr~~VFrL~~~dg~e~Lfqa~~~~~m~~Wi~~IN~~A 118 (119)
T PF15410_consen 81 TKRKNVFRLRTADGSEYLFQASDEEEMNEWIDAINYAA 118 (119)
T ss_dssp TTCSSEEEEE-TTS-EEEEE-SSHHHHHHHHHHHHHH-
T ss_pred ccCCeEEEEEeCCCCEEEEECCCHHHHHHHHHHHhhhc
Confidence 7899999999986 789999999999999999998765
No 32
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.52 E-value=1.7e-13 Score=82.45 Aligned_cols=93 Identities=31% Similarity=0.683 Sum_probs=74.5
Q ss_pred eEEEEEEeCCCC-CCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCC-eEEEEE
Q 032301 29 RSGWLTKQGEYI-KTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRT-ETMYFI 106 (143)
Q Consensus 29 ~~G~L~k~~~~~-~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~-~~~~~~ 106 (143)
++|||.++.... ..|+++||+|.++.+.+|..........+...++|.++... ..+......++|.|.+.+ +.++|+
T Consensus 1 ~~G~l~~~~~~~~~~w~~~~~~L~~~~l~~~~~~~~~~~~~~~~~i~l~~~~v~-~~~~~~~~~~~f~i~~~~~~~~~~~ 79 (96)
T cd00821 1 KEGYLLKKTGKLRKGWKRRWFVLFNDLLLYYKKKSSKKSYKPKGSIPLSGAEVE-ESPDDSGRKNCFEIRTPDGRSYLLQ 79 (96)
T ss_pred CcchhhhhhChhhCCccEEEEEEECCEEEEEECCCCCcCCCCcceEEcCCCEEE-ECCCcCCCCcEEEEecCCCcEEEEE
Confidence 368998876544 78999999999999999988763212578899999985444 333323468999999988 999999
Q ss_pred cCCHHHHHHHHHHHHH
Q 032301 107 ADSEKEKEDWINSIGR 122 (143)
Q Consensus 107 a~s~~e~~~W~~al~~ 122 (143)
|+|..++..|+.+|+.
T Consensus 80 ~~s~~~~~~W~~~l~~ 95 (96)
T cd00821 80 AESEEEREEWIEALQS 95 (96)
T ss_pred eCCHHHHHHHHHHHhc
Confidence 9999999999999975
No 33
>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS is a calcium-dependent activator involved in secretion. It contains a central PH domain that binds to phosphoinositide 4,5 bisphosphate containing liposomes. However, membrane association may also be mediated by binding to phosphatidlyserine via general electrostatic interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.52 E-value=3.2e-14 Score=85.91 Aligned_cols=103 Identities=21% Similarity=0.408 Sum_probs=79.6
Q ss_pred ceEEEEEEeCC-CCCCceeEEEEEECCeEEEEecCCC-CCCCCcceEEeCCceEEeecCc---------ccCCCcceEEE
Q 032301 28 ERSGWLTKQGE-YIKTWRRRWFVLKQGKLFWFKESTV-TRASKPRGVIPVASCLTVKGAE---------DVLNKQYAFEL 96 (143)
Q Consensus 28 ~~~G~L~k~~~-~~~~w~~r~~vL~~~~l~~~~~~~~-~~~~~~~~~i~l~~~~~v~~~~---------~~~~~~~~f~i 96 (143)
.++|||.+.|+ ..+.|++|||+|.+-+-+.|.-... .+...|...+.|+|.++..-.+ +..+.++-|..
T Consensus 3 k~sGyL~k~Gg~~~KkWKKRwFvL~qvsQYtfamcsy~ekks~P~e~~qldGyTvDy~~~~~~~~~~~~~~~gg~~ff~a 82 (117)
T cd01234 3 KHCGYLYAIGKNVWKKWKKRFFVLVQVSQYTFAMCSYREKKAEPTEFIQLDGYTVDYMPESDPDPNSELSLQGGRHFFNA 82 (117)
T ss_pred ceeEEEEeccchhhhhhheeEEEEEchhHHHHHHHhhhhhcCCchhheeecceEEeccCCCCCCcccccccccchhhhhe
Confidence 58999999987 6789999999999765444443331 1256799999999976643322 12355788999
Q ss_pred EeCCeEEEEEcCCHHHHHHHHHHHHHHHHhhCCC
Q 032301 97 STRTETMYFIADSEKEKEDWINSIGRSIVQHSRS 130 (143)
Q Consensus 97 ~~~~~~~~~~a~s~~e~~~W~~al~~~~~~~~~~ 130 (143)
+..+..+.|.++++.|..-|+.||-+|.-+..++
T Consensus 83 vkegd~~~fa~~de~~r~lwvqa~yratgqshkp 116 (117)
T cd01234 83 VKEGDELKFATDDENERHLWVQAMYRATGQSHKP 116 (117)
T ss_pred eccCcEEEEeccchHHHHHHHHHHHHHcCcccCC
Confidence 9899999999999999999999999988766554
No 34
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=99.50 E-value=1.2e-12 Score=79.23 Aligned_cols=90 Identities=30% Similarity=0.616 Sum_probs=71.7
Q ss_pred EEEEEEeCCC----CCCceeEEEEEECCeEEEEecCCCCCCCCcc-eEEeCCceEEeecCcccCCCcceEEEEeC---Ce
Q 032301 30 SGWLTKQGEY----IKTWRRRWFVLKQGKLFWFKESTVTRASKPR-GVIPVASCLTVKGAEDVLNKQYAFELSTR---TE 101 (143)
Q Consensus 30 ~G~L~k~~~~----~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~-~~i~l~~~~~v~~~~~~~~~~~~f~i~~~---~~ 101 (143)
+|||...+.. .+.|+++||+|.++.|.+|+.+.. ..+. ..+++.... +...+......++|.|... .+
T Consensus 2 ~g~l~~~~~~~~~~~~~w~~~~~~l~~~~l~~~~~~~~---~~~~~~~~~l~~~~-v~~~~~~~~~~~~F~i~~~~~~~~ 77 (99)
T cd00900 2 EGYLLKLGSDDVSKGKRWKRRWFFLFDDGLLLYKSDDK---KEIKPGSIPLSEIS-VEEDPDGSDDPNCFAIVTKDRGRR 77 (99)
T ss_pred ccEEEEeCCCccccccCceeeEEEEECCEEEEEEcCCC---CcCCCCEEEccceE-EEECCCCCCCCceEEEECCCCCcE
Confidence 6888887654 378999999999999999999873 2233 578888866 4444332356899999988 68
Q ss_pred EEEEEcCCHHHHHHHHHHHHHH
Q 032301 102 TMYFIADSEKEKEDWINSIGRS 123 (143)
Q Consensus 102 ~~~~~a~s~~e~~~W~~al~~~ 123 (143)
.++|+|+|.+++..|+.+|+.+
T Consensus 78 ~~~~~~~~~~~~~~W~~al~~~ 99 (99)
T cd00900 78 VFVFQADSEEEAQEWVEALQQA 99 (99)
T ss_pred EEEEEcCCHHHHHHHHHHHhcC
Confidence 9999999999999999999753
No 35
>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain. Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.44 E-value=6.3e-12 Score=77.77 Aligned_cols=99 Identities=20% Similarity=0.257 Sum_probs=76.4
Q ss_pred CceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCCeEEEEE
Q 032301 27 PERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRTETMYFI 106 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~~~~~~~ 106 (143)
.+++|-|.|.. .+..+.|+|.|-.+.|.|-+.......-.....++|.++.+ ...++....+++|.|.++.+++.++
T Consensus 4 li~eG~L~K~~--rk~~~~R~ffLFnD~LvY~~~~~~~~~~~~~~~i~L~~~~v-~~~~d~~~~~n~f~I~~~~kSf~v~ 80 (104)
T cd01218 4 LVGEGVLTKMC--RKKPKQRQFFLFNDILVYGNIVISKKKYNKQHILPLEGVQV-ESIEDDGIERNGWIIKTPTKSFAVY 80 (104)
T ss_pred EEecCcEEEee--cCCCceEEEEEecCEEEEEEeecCCceeeEeeEEEccceEE-EecCCcccccceEEEecCCeEEEEE
Confidence 47899999885 45778899999999888864322111223567899999744 3444433558999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHhhC
Q 032301 107 ADSEKEKEDWINSIGRSIVQHS 128 (143)
Q Consensus 107 a~s~~e~~~W~~al~~~~~~~~ 128 (143)
|+|.+|..+|+.+|+.|+....
T Consensus 81 A~s~~eK~eWl~~i~~ai~~~l 102 (104)
T cd01218 81 AATETEKREWMLHINKCVTDLL 102 (104)
T ss_pred cCCHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998653
No 36
>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.34 E-value=9.1e-11 Score=72.18 Aligned_cols=96 Identities=16% Similarity=0.465 Sum_probs=73.7
Q ss_pred eEEEEEEeCC--C--CCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecC---c----ccCCCcceEEEE
Q 032301 29 RSGWLTKQGE--Y--IKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGA---E----DVLNKQYAFELS 97 (143)
Q Consensus 29 ~~G~L~k~~~--~--~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~---~----~~~~~~~~f~i~ 97 (143)
++|||..... . .+.|++.|+||.+..+++|..+.......|..++++.....|.+. + +...-++.|+|.
T Consensus 2 lEGwlsvP~~~~~~~k~gW~r~yvVv~~~Kl~lYd~e~~~~~~~p~~vldl~~~fhv~~V~asDVi~a~~kDiP~IF~I~ 81 (112)
T cd01242 2 MEGWLSLPNRTNKSRKPGWKKQYVVVSSRKILFYNDEQDKENSTPSMILDIDKLFHVRPVTQGDVYRADAKEIPKIFQIL 81 (112)
T ss_pred cceeEEccCCCCccccCCceEEEEEEeCCEEEEEecCccccCCCcEEEEEccceeeeecccHHHeeecCcccCCeEEEEE
Confidence 6899986532 2 258999999999999999998886545668888888763333221 1 123448999999
Q ss_pred eCC--eEEEEEcCCHHHHHHHHHHHHHHH
Q 032301 98 TRT--ETMYFIADSEKEKEDWINSIGRSI 124 (143)
Q Consensus 98 ~~~--~~~~~~a~s~~e~~~W~~al~~~~ 124 (143)
..+ ++++|-|+++.|.+.|+.+|.+.+
T Consensus 82 ~~~~~~~lllLA~s~~ek~kWV~~L~~~~ 110 (112)
T cd01242 82 YANEARDLLLLAPQTDEQNKWVSRLVKKI 110 (112)
T ss_pred eCCccceEEEEeCCchHHHHHHHHHHHhc
Confidence 866 789999999999999999997755
No 37
>KOG3723 consensus PH domain protein Melted [Signal transduction mechanisms]
Probab=99.25 E-value=7.6e-13 Score=101.09 Aligned_cols=125 Identities=21% Similarity=0.379 Sum_probs=95.8
Q ss_pred hhhHHhcccccCCCCCCccccCCCceEEEEEEeCC---CCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEE
Q 032301 4 LWRAISGQTNQLSDYDSTEFWSNPERSGWLTKQGE---YIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLT 80 (143)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~k~~~---~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~ 80 (143)
.|.|++|.+|+.... .++..+.+..+|.|..+.+ +.+.|+.|||.|.+..|.|.+........ -..|+|+.+..
T Consensus 713 ~W~Cf~CnnPeKa~y-Fvn~~gqp~iEGQLKEKKGrWRf~kRW~TrYFTLSgA~L~~~kg~s~~dS~--~~~IDl~~IRS 789 (851)
T KOG3723|consen 713 AWQCFMCNNPEKATY-FVNQDGQPLIEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSKDDSD--DCPIDLSKIRS 789 (851)
T ss_pred ccceeecCChHHeee-eecCCCCchhcchhhhhccchhhhhhhccceEEecchhhhcccCCCCCCCC--CCCccHHHhhh
Confidence 699999999986644 3344566799999986543 56899999999999999997665532122 26688887766
Q ss_pred eecCccc---CCCcceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhhCCCC
Q 032301 81 VKGAEDV---LNKQYAFELSTRTETMYFIADSEKEKEDWINSIGRSIVQHSRSV 131 (143)
Q Consensus 81 v~~~~~~---~~~~~~f~i~~~~~~~~~~a~s~~e~~~W~~al~~~~~~~~~~~ 131 (143)
|...... ..-+-.|.|.+.+.++.+.+.+++.+++|+++|+-+++.+....
T Consensus 790 Vk~v~~kr~~rslpKAFEIFTAD~T~ILKaKDeKNAEEWlqCL~IavAHa~~r~ 843 (851)
T KOG3723|consen 790 VKAVAKKRRDRSLPKAFEIFTADKTYILKAKDEKNAEEWLQCLNIAVAHAKERE 843 (851)
T ss_pred HHHHHhhhhhcccchhhheeecCceEEeecccccCHHHHHHHHHHHHHHHHHHH
Confidence 6643311 22367899999999999999999999999999999998765543
No 38
>cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip consists of a Ras-associated domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.23 E-value=7.3e-11 Score=72.73 Aligned_cols=98 Identities=16% Similarity=0.307 Sum_probs=68.0
Q ss_pred eEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCc----ccCCCcceEEEEeCC----
Q 032301 29 RSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAE----DVLNKQYAFELSTRT---- 100 (143)
Q Consensus 29 ~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~----~~~~~~~~f~i~~~~---- 100 (143)
.+|+|+.+....+.|+++||+|+...|+|+....-...........+.+..+..... -.....++|.|..+.
T Consensus 2 ~~g~LylK~~gkKsWKk~~f~LR~SGLYy~~Kgksk~srdL~cl~~f~~~nvY~~~~~kKk~kAPTd~~F~~K~~~~q~~ 81 (114)
T cd01259 2 MEGPLYLKADGKKSWKKYYFVLRSSGLYYFPKEKTKNTRDLACLNLLHGHNVYTGLGWRKKYKSPTDYCFGFKAVGDQSK 81 (114)
T ss_pred ccceEEEccCCCccceEEEEEEeCCeeEEccCCCcCCHHHHHHHHhcccCcEEEEechhhccCCCCCceEEEeccccCcc
Confidence 589999997778999999999999999988766522112223344444432222221 112347899997643
Q ss_pred ---eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 032301 101 ---ETMYFIADSEKEKEDWINSIGRSIVQ 126 (143)
Q Consensus 101 ---~~~~~~a~s~~e~~~W~~al~~~~~~ 126 (143)
...+|+|+|++.+..|+.||+-+...
T Consensus 82 ~s~~ik~lCaeDe~t~~~W~ta~Ri~KyG 110 (114)
T cd01259 82 GSQSIKYLCAEDLPTLDRWLTAIRIAKYG 110 (114)
T ss_pred cchhheeeccCCHHHHHHHHHHHHHHhhh
Confidence 34789999999999999999887653
No 39
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.23 E-value=7.6e-10 Score=69.12 Aligned_cols=96 Identities=19% Similarity=0.326 Sum_probs=69.1
Q ss_pred ceEEEEEEeC--CCCCCceeEEEEEECCeEEEEecCCCCCC---CCcceEEeCC-ceEEeec---Cc----ccCCCcceE
Q 032301 28 ERSGWLTKQG--EYIKTWRRRWFVLKQGKLFWFKESTVTRA---SKPRGVIPVA-SCLTVKG---AE----DVLNKQYAF 94 (143)
Q Consensus 28 ~~~G~L~k~~--~~~~~w~~r~~vL~~~~l~~~~~~~~~~~---~~~~~~i~l~-~~~~v~~---~~----~~~~~~~~f 94 (143)
.++|||.... +..+.|+++|+||.+..|++|..+..... ..+.-++++. +...|.. .+ +....++.|
T Consensus 3 ~~EGwvkvP~~~~~krGW~r~~vVv~~~Kl~lYd~e~~k~~~p~~~~~~vLdlrD~~fsV~~VtasDvi~a~~kDiP~If 82 (122)
T cd01243 3 AYEGHVKIPKPGGVKKGWQRALVVVCDFKLFLYDIAEDRASQPSVVISQVLDMRDPEFSVSSVLESDVIHASKKDIPCIF 82 (122)
T ss_pred cceeeEeccCCCCcccCceEEEEEEeCCEEEEEeCCccccCCccCceeEEEEcCCCCEEEEEecHHHccccCcccCCeEE
Confidence 5799998653 33468999999999999999998774322 3455667884 3333321 11 123448899
Q ss_pred EEEeC-------CeEEEEEcCCHHHHHHHHHHHHHH
Q 032301 95 ELSTR-------TETMYFIADSEKEKEDWINSIGRS 123 (143)
Q Consensus 95 ~i~~~-------~~~~~~~a~s~~e~~~W~~al~~~ 123 (143)
+|... ..+.+|-|+|+.|.+.|+.||...
T Consensus 83 ~I~~~~~~~~~~~~~~~~lA~s~~eK~kWV~aL~~l 118 (122)
T cd01243 83 RVTTSQISASSSKCSTLMLADTEEEKSKWVGALSEL 118 (122)
T ss_pred EEEEecccCCCCccEEEEEeCCchHHHHHHHHHHHH
Confidence 99863 367999999999999999999754
No 40
>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain. Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.22 E-value=3.9e-10 Score=70.57 Aligned_cols=100 Identities=18% Similarity=0.213 Sum_probs=75.3
Q ss_pred CCceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCC--------CCCcceEEeCCceEEeecCcccCCCcceEEEE
Q 032301 26 NPERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTR--------ASKPRGVIPVASCLTVKGAEDVLNKQYAFELS 97 (143)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~--------~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~ 97 (143)
..+++|-|.+.+...+..+.|+|.|-++.|.|.+....+. .-...+.+++.++.+ ...++...-+++|.|.
T Consensus 3 elI~EG~L~ki~~~~~~~q~R~~FLFd~~Li~CK~~~~~~~~~g~~~~~y~~k~~~~l~~~~V-~d~~d~~~~knaF~I~ 81 (112)
T cd01261 3 EFIMEGTLTRVGPSKKAKHERHVFLFDGLMVLCKSNHGQPRLPGASSAEYRLKEKFFMRKVDI-NDKPDSSEYKNAFEII 81 (112)
T ss_pred cccccCcEEEEecccCCcceEEEEEecCeEEEEEeccCcccccccccceEEEEEEEeeeeeEE-EEcCCCcccCceEEEE
Confidence 3588999998875557889999999999999988644210 112335577777543 3444444558999999
Q ss_pred eC-CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 032301 98 TR-TETMYFIADSEKEKEDWINSIGRSIVQ 126 (143)
Q Consensus 98 ~~-~~~~~~~a~s~~e~~~W~~al~~~~~~ 126 (143)
+. .+.+.|+|.|+++..+|+.+|..++..
T Consensus 82 ~~~~~s~~l~Akt~eeK~~Wm~~l~~~~~~ 111 (112)
T cd01261 82 LKDGNSVIFSAKNAEEKNNWMAALISVQTK 111 (112)
T ss_pred cCCCCEEEEEECCHHHHHHHHHHHHHHhcC
Confidence 85 578999999999999999999988753
No 41
>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.
Probab=99.20 E-value=5.5e-10 Score=68.97 Aligned_cols=90 Identities=22% Similarity=0.386 Sum_probs=66.9
Q ss_pred CCceEEEEEEeCCCCCCceeEEEEEECC-eEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCCeEEE
Q 032301 26 NPERSGWLTKQGEYIKTWRRRWFVLKQG-KLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRTETMY 104 (143)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~r~~vL~~~-~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~~~~~ 104 (143)
.++++|.+.|+.+.. .++|+++|++. .|.|+.... ....+.|+++....++. .....|.|.+|+++|+
T Consensus 12 ~Il~~g~v~K~kgl~--~kkR~liLTd~PrL~Yvdp~~----~~~KGeI~~~~~l~v~~-----k~~~~F~I~tp~RtY~ 80 (104)
T PF14593_consen 12 LILKQGYVKKRKGLF--AKKRQLILTDGPRLFYVDPKK----MVLKGEIPWSKELSVEV-----KSFKTFFIHTPKRTYY 80 (104)
T ss_dssp -EEEEEEEEEEETTE--EEEEEEEEETTTEEEEEETTT----TEEEEEE--STT-EEEE-----CSSSEEEEEETTEEEE
T ss_pred eEEEEEEEEEeeceE--EEEEEEEEccCCEEEEEECCC----CeECcEEecCCceEEEE-----ccCCEEEEECCCcEEE
Confidence 478999999997653 89999999988 666665553 45679999997666654 3346999999999999
Q ss_pred EEcCCHHHHHHHHHHHHHHHHhh
Q 032301 105 FIADSEKEKEDWINSIGRSIVQH 127 (143)
Q Consensus 105 ~~a~s~~e~~~W~~al~~~~~~~ 127 (143)
|.. ...++..|+.+|+.+...+
T Consensus 81 l~d-~~~~A~~W~~~I~~~~~~~ 102 (104)
T PF14593_consen 81 LED-PEGNAQQWVEAIEEVKKQY 102 (104)
T ss_dssp EE--TTS-HHHHHHHHHHHHHHH
T ss_pred EEC-CCCCHHHHHHHHHHHHHHh
Confidence 986 4456888999999998764
No 42
>cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. PKD consists of 2 C1 domains, followed by a PH domain and a kinase domain. While the PKD PH domain has not been shown to bind phosphorylated inositol lipids and is not required for membrane translocation, it is required for nuclear export. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.17 E-value=6.2e-10 Score=68.95 Aligned_cols=93 Identities=17% Similarity=0.371 Sum_probs=73.9
Q ss_pred ceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCccc----CCCcceEEEEeCCeEE
Q 032301 28 ERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDV----LNKQYAFELSTRTETM 103 (143)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~----~~~~~~f~i~~~~~~~ 103 (143)
+++|||-.-...-+.|||+|+.|..+.+.+|.++. ...+...|+|..+..|+..... ....|+|.|.|.+.+|
T Consensus 1 lkEGWmVHyT~~d~~rKRhYWrLDsK~Itlf~~e~---~skyyKeIPLsEIl~V~~~~~~~~~~~~~~hcFEi~T~~~vY 77 (117)
T cd01239 1 LKEGWMVHYTSSDNRRKKHYWRLDSKAITLYQEES---GSRYYKEIPLAEILSVSSNNGDSVLAKHPPHCFEIRTTTNVY 77 (117)
T ss_pred CccceEEEEecCccceeeeEEEecCCeEEEEEcCC---CCeeeEEeehHHheEEeccCCCcCCCCCCCcEEEEEecCEEE
Confidence 47899977644447899999999999999999987 6678999999998888754321 2568999999999999
Q ss_pred EEEcC--------------------CHHHHHHHHHHHHHH
Q 032301 104 YFIAD--------------------SEKEKEDWINSIGRS 123 (143)
Q Consensus 104 ~~~a~--------------------s~~e~~~W~~al~~~ 123 (143)
|+..+ ....++.|-.||+.|
T Consensus 78 ~VG~~~~~~~~~~~~~~~~~~~sg~g~~~a~~We~aI~qA 117 (117)
T cd01239 78 FVGGEDYHAFSGGPPKKIPPSDSGRGSDNAQSWETAIRQA 117 (117)
T ss_pred EecccccccCCCcccCCCCcccccchhHHHHHHHHHHhcC
Confidence 99664 234668899998754
No 43
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.15 E-value=7.7e-11 Score=85.82 Aligned_cols=101 Identities=27% Similarity=0.512 Sum_probs=71.2
Q ss_pred CCCceEEEEEEeCCCCCCceeEEEEEE-CCeEEEEecCCCCCCC--CcceEEeCCceEEeecCcccCCCcceEEEEeCC-
Q 032301 25 SNPERSGWLTKQGEYIKTWRRRWFVLK-QGKLFWFKESTVTRAS--KPRGVIPVASCLTVKGAEDVLNKQYAFELSTRT- 100 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~-~~~l~~~~~~~~~~~~--~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~- 100 (143)
.+++++|||+|+|...+.|++|||+|. ++.+.-|+........ .|+.-..+.+|..+.. ...+++.|.|....
T Consensus 13 ~~vvkEgWlhKrGE~IknWRpRYF~l~~DG~~~Gyr~kP~~~~~~p~pLNnF~v~~cq~m~~---erPrPntFiiRcLQW 89 (516)
T KOG0690|consen 13 EDVVKEGWLHKRGEHIKNWRPRYFLLFNDGTLLGYRSKPKEVQPTPEPLNNFMVRDCQTMKT---ERPRPNTFIIRCLQW 89 (516)
T ss_pred hhhHHhhhHhhcchhhhcccceEEEEeeCCceEeeccCCccCCCCcccccchhhhhhhhhhc---cCCCCceEEEEeeee
Confidence 368999999999999999999999996 6777778766522111 1222222333322211 13678999998754
Q ss_pred ---eEEEEEcCCHHHHHHHHHHHHHHHHhhC
Q 032301 101 ---ETMYFIADSEKEKEDWINSIGRSIVQHS 128 (143)
Q Consensus 101 ---~~~~~~a~s~~e~~~W~~al~~~~~~~~ 128 (143)
-...|+++|.++.++|+.||+.+.....
T Consensus 90 TTVIERTF~ves~~eRq~W~~AIq~vsn~l~ 120 (516)
T KOG0690|consen 90 TTVIERTFYVESAEERQEWIEAIQAVSNRLK 120 (516)
T ss_pred eeeeeeeeecCCHHHHHHHHHHHHHHhhhhh
Confidence 3456889999999999999998876443
No 44
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]
Probab=99.15 E-value=1.4e-10 Score=90.49 Aligned_cols=107 Identities=19% Similarity=0.356 Sum_probs=84.5
Q ss_pred CceEEEEEEeCCC-----CCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcc-cCCCcceEEEEeCC
Q 032301 27 PERSGWLTKQGEY-----IKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAED-VLNKQYAFELSTRT 100 (143)
Q Consensus 27 ~~~~G~L~k~~~~-----~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~-~~~~~~~f~i~~~~ 100 (143)
+.++|.|.++... .+.+|+|||.|+...|.|.|++. ..|...|+|..+..|+..++ ..+.+|+|+|++.+
T Consensus 565 v~k~glm~kr~~gr~~~~~~~FKKryf~LT~~~Ls~~Ksp~----~q~~~~Ipl~nI~avEklee~sF~~knv~qVV~~d 640 (800)
T KOG2059|consen 565 VLKEGLMIKRAQGRGRFGKKNFKKRYFRLTTEELSYAKSPG----KQPIYTIPLSNIRAVEKLEEKSFKMKNVFQVVHTD 640 (800)
T ss_pred eecccceEeccccccchhhhhhhheEEEeccceeEEecCCc----cCcccceeHHHHHHHHHhhhhccCCCceEEEEecC
Confidence 3456666665322 25789999999999999999995 45899999999877775543 35679999999999
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHHHhhCCCCCCCccc
Q 032301 101 ETMYFIADSEKEKEDWINSIGRSIVQHSRSVTDSEIV 137 (143)
Q Consensus 101 ~~~~~~a~s~~e~~~W~~al~~~~~~~~~~~~~~~~~ 137 (143)
++.|++|.+-.|..+|+++|+.+...+.......+..
T Consensus 641 rtly~Q~~n~vEandWldaL~kvs~~N~~rLas~HPg 677 (800)
T KOG2059|consen 641 RTLYVQAKNCVEANDWLDALRKVSCCNQNRLASYHPG 677 (800)
T ss_pred cceeEecCCchHHHHHHHHHHHHhccCcchhhhcCCc
Confidence 9999999999999999999999988666544444433
No 45
>KOG1090 consensus Predicted dual-specificity phosphatase [General function prediction only]
Probab=99.12 E-value=2.8e-11 Score=97.49 Aligned_cols=96 Identities=27% Similarity=0.563 Sum_probs=81.8
Q ss_pred CCceEEEEEEeCCCCCCceeEEEEEE--CCeEEEEecCCCCCCCCcceEEeCCceEEeec-CcccCCCcceEEEEeCCeE
Q 032301 26 NPERSGWLTKQGEYIKTWRRRWFVLK--QGKLFWFKESTVTRASKPRGVIPVASCLTVKG-AEDVLNKQYAFELSTRTET 102 (143)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~r~~vL~--~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~-~~~~~~~~~~f~i~~~~~~ 102 (143)
..+.+|+|+|+|...+.|+.|||||. ...|.||.+-+ +.+|.|.|+|.....+.. .++....+--|.+.+.+++
T Consensus 1633 Nr~~eG~LyKrGA~lK~Wk~RwFVLd~~khqlrYYd~~e---dt~pkG~IdLaevesv~~~~~k~vdekgffdlktt~rv 1709 (1732)
T KOG1090|consen 1633 NRIPEGYLYKRGAKLKLWKPRWFVLDPDKHQLRYYDDFE---DTKPKGCIDLAEVESVALIGPKTVDEKGFFDLKTTNRV 1709 (1732)
T ss_pred ccCcccchhhcchhhcccccceeEecCCccceeeecccc---cccccchhhhhhhhhhcccCccccCccceeeeehhhHH
Confidence 45679999999999999999999996 46899999988 557999999987665544 2234456788999999999
Q ss_pred EEEEcCCHHHHHHHHHHHHHHH
Q 032301 103 MYFIADSEKEKEDWINSIGRSI 124 (143)
Q Consensus 103 ~~~~a~s~~e~~~W~~al~~~~ 124 (143)
|-|+|.+...+++|+.+|+.++
T Consensus 1710 ynf~a~nin~AqqWve~iqscl 1731 (1732)
T KOG1090|consen 1710 YNFCAQNINLAQQWVECIQSCL 1731 (1732)
T ss_pred HHHHhccchHHHHHHHHHHHhh
Confidence 9999999999999999999875
No 46
>KOG3640 consensus Actin binding protein Anillin [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]
Probab=99.11 E-value=2.1e-10 Score=91.83 Aligned_cols=102 Identities=24% Similarity=0.499 Sum_probs=83.3
Q ss_pred CCceEEEEEEe--CCCCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCc---ccCCCcceEEEEe--
Q 032301 26 NPERSGWLTKQ--GEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAE---DVLNKQYAFELST-- 98 (143)
Q Consensus 26 ~~~~~G~L~k~--~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~---~~~~~~~~f~i~~-- 98 (143)
++.+.|||+.- +..++.|.|+||+|.++.+.|.+.+.+.+.+.|.+.|+|..|+.-...+ +...+.+.|.|.+
T Consensus 989 dVEYrGFLtmfed~sgfGaWhRyWc~L~gg~I~fWk~PdDEkrK~Pig~IDLt~CTsq~ie~a~rdicar~ntFhie~~r 1068 (1116)
T KOG3640|consen 989 DVEYRGFLTMFEDGSGFGAWHRYWCALHGGEIKFWKYPDDEKRKVPIGQIDLTKCTSQSIEEARRDICARPNTFHIEVWR 1068 (1116)
T ss_pred ceeeeeeeeeeeccCCCchhhhhhHHhcCCeeeeecCcchhcccCcceeeehhhhhccccccchhhhccCCceeEEEeec
Confidence 57788999764 3456789999999999999999998876677899999999998765444 3467899999983
Q ss_pred -------C----Ce-EEEEEcCCHHHHHHHHHHHHHHHHhh
Q 032301 99 -------R----TE-TMYFIADSEKEKEDWINSIGRSIVQH 127 (143)
Q Consensus 99 -------~----~~-~~~~~a~s~~e~~~W~~al~~~~~~~ 127 (143)
+ .+ ...|.|++.++++.|+.+|+.++...
T Consensus 1069 Pl~~Dqep~~ie~r~Rv~LaADTkeel~~Wls~iN~tL~~L 1109 (1116)
T KOG3640|consen 1069 PLEDDQEPLLIEKRLRVMLAADTKEELQSWLSAINDTLKQL 1109 (1116)
T ss_pred ccccccCcchhhhcceeeeecccHHHHHHHHHHHHHHHHHH
Confidence 1 12 47899999999999999999887653
No 47
>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.09 E-value=3.1e-09 Score=65.16 Aligned_cols=91 Identities=21% Similarity=0.486 Sum_probs=60.8
Q ss_pred eEEEEEEeCC--CCCCceeEEEEEECC-eEE---EEecCC--C-CCCCCcceEEeCCceEEeecCcccCCCcceEEEEeC
Q 032301 29 RSGWLTKQGE--YIKTWRRRWFVLKQG-KLF---WFKEST--V-TRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTR 99 (143)
Q Consensus 29 ~~G~L~k~~~--~~~~w~~r~~vL~~~-~l~---~~~~~~--~-~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~ 99 (143)
++|||+.+.+ ....|.+.||...+. .++ .+.... . .........+.|..|+ +...+ ...+++||.|..+
T Consensus 1 k~GYLy~~~k~~~~~~Wvk~y~~~~~~~~~f~m~~~~q~s~~~~~g~v~~~e~~~l~sc~-~r~~~-~~dRRFCFei~~~ 78 (104)
T cd01249 1 KEGYLYMQEKSKFGGSWTKYYCTYSKETRIFTMVPFNQKTKTDMKGAVAQDETLTLKSCS-RRKTE-SIDKRFCFDVEVE 78 (104)
T ss_pred CCceEEEEcCCCCCCeEEEEEEEEEcCCcEEEEEecccccccccCcccccceEEeeeecc-ccccC-CccceeeEeeeec
Confidence 4799998743 334799999998753 332 222221 0 1112233556666764 33333 3478999999887
Q ss_pred Ce--EEEEEcCCHHHHHHHHHHHH
Q 032301 100 TE--TMYFIADSEKEKEDWINSIG 121 (143)
Q Consensus 100 ~~--~~~~~a~s~~e~~~W~~al~ 121 (143)
.+ ++.|+|+|+.+...|+.|+.
T Consensus 79 ~~~~~~~lQA~Se~~~~~Wi~A~d 102 (104)
T cd01249 79 EKPGVITMQALSEKDRRLWIEAMD 102 (104)
T ss_pred CCCCeEEEEecCHHHHHHHHHhhc
Confidence 75 89999999999999999973
No 48
>PLN00188 enhanced disease resistance protein (EDR2); Provisional
Probab=99.00 E-value=7.2e-09 Score=81.94 Aligned_cols=101 Identities=19% Similarity=0.257 Sum_probs=80.4
Q ss_pred CCceEEEEEEeCC---CCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCccc---CCCcceEEEEeC
Q 032301 26 NPERSGWLTKQGE---YIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDV---LNKQYAFELSTR 99 (143)
Q Consensus 26 ~~~~~G~L~k~~~---~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~---~~~~~~f~i~~~ 99 (143)
++.++|||+..+. +....++|||||.+..+.|||..... ...|..+..+.++..|+...-. .+--++|.|.+.
T Consensus 3 ~~~~eGW~y~~g~~kig~~~~~~Ry~vl~~~~~~~yK~~P~~-~~~pirs~~id~~~rVed~Gr~~~~g~~~yvl~~Yn~ 81 (719)
T PLN00188 3 KVVYEGWMVRYGRRKIGRSYIHMRYFVLESRLLAYYKKKPQD-NQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNK 81 (719)
T ss_pred cceEeeEEEEEcccccccccceeEEEEEecchhhhcccCCcc-ccccceeeccCCCceEeecCceEEcCceEEEEEEecC
Confidence 5689999998764 34578999999999999999987644 3678888889987788765421 112467788765
Q ss_pred ---CeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 032301 100 ---TETMYFIADSEKEKEDWINSIGRSIVQH 127 (143)
Q Consensus 100 ---~~~~~~~a~s~~e~~~W~~al~~~~~~~ 127 (143)
++...|.|.|.+|+..|+.||+.++.+.
T Consensus 82 ~~~~~~~~~~a~~~eea~~W~~a~~~a~~q~ 112 (719)
T PLN00188 82 KEKYHRITMAAFNIQEALIWKEKIESVIDQH 112 (719)
T ss_pred CCccccEEEecCCHHHHHHHHHHHHHHHhhh
Confidence 3678999999999999999999999975
No 49
>cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain. Syntrophin pleckstrin homology (PH) domain. Syntrophins are peripheral membrane proteins, which associate with the Duchenne muscular dystrophy protein dystrophin and other proteins to form the dystrophin glycoprotein complex (DGC). There are five syntrophin isoforms, alpha1, beta1, beta2, gamma1, and gamma2. They all contain two PH domains, with the N-teminal PH domain interupted by a PDZ domain. The N-terminal PH domain of alpha1syntrophin binds phosphatidylinositol 4,5-bisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.94 E-value=6.3e-09 Score=64.48 Aligned_cols=94 Identities=22% Similarity=0.461 Sum_probs=67.1
Q ss_pred eEEEEEEeCC----CCCCceeEEEEEECCeEEEEecCCCC--CCCCcceEEeCCc--eEEeecCcccC---CCcceEEEE
Q 032301 29 RSGWLTKQGE----YIKTWRRRWFVLKQGKLFWFKESTVT--RASKPRGVIPVAS--CLTVKGAEDVL---NKQYAFELS 97 (143)
Q Consensus 29 ~~G~L~k~~~----~~~~w~~r~~vL~~~~l~~~~~~~~~--~~~~~~~~i~l~~--~~~v~~~~~~~---~~~~~f~i~ 97 (143)
+.|||..+-. ..+.|+++|++|++..+++|+.+... .-..|....+|-. ...+...+... +++++|.|.
T Consensus 1 hmGW~~E~~~~~~~~~~~wrP~F~aL~~~dl~ly~s~P~s~e~w~~p~~~y~L~~~atrvv~~~~~~~~~~~~~~~F~ir 80 (108)
T cd01258 1 HIGWVNEQLSGDDESSQRWRPRFLALKGSEFLFFETPPLSVEDWSRPLYVYKLYDVATRLVKNSSTRRLNDQRDNCFLIR 80 (108)
T ss_pred CceecccccCCCCccccccceEEEEEcCCcEEEEeCCCCCHHHHhChhhhChhHHhhhheeccCCccCcCCCCceEEEEE
Confidence 3689987722 34789999999999999999988731 1233555555441 11122222223 678999999
Q ss_pred eCC--eEEEEEcCCHHHHHHHHHHHHH
Q 032301 98 TRT--ETMYFIADSEKEKEDWINSIGR 122 (143)
Q Consensus 98 ~~~--~~~~~~a~s~~e~~~W~~al~~ 122 (143)
+.. .+++|..++..|+..|..||+.
T Consensus 81 tg~~vesh~fsVEt~~dL~~W~raiv~ 107 (108)
T cd01258 81 TGTQVENHYLRVETHRDLASWERALVR 107 (108)
T ss_pred cCCceeeEEEEecCHHHHHHHHHHHhc
Confidence 987 6799999999999999999964
No 50
>cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta ARK1 is a G protein-coupled receptor kinase (GRK). It phosphorylates activated G-protein coupled receptors leading to the release of the previously bound heterotrimeric G protein agonist and thus signal termination. It consists of a domain found in regulators of G-protein signaling (RGS)(RH), a serine/threonine kinase domain and a C-terminal PH domain. The Beta-Ark 1 PH domain has an extended C-terminal helix, which mediates interactions with G beta gamma subunits. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or
Probab=98.83 E-value=5.3e-09 Score=63.98 Aligned_cols=98 Identities=17% Similarity=0.343 Sum_probs=73.7
Q ss_pred CCceEEEEEEeCC-CCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCC-eEE
Q 032301 26 NPERSGWLTKQGE-YIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRT-ETM 103 (143)
Q Consensus 26 ~~~~~G~L~k~~~-~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~-~~~ 103 (143)
|++..|++.|.|+ +...|++|||-|.++.|-+|.... ......|.+..+..|.......+...|..|...+ ..+
T Consensus 2 DcIvhGyi~KLGGPFls~WQ~Ry~~LfPNRLE~~~~~~----~~~~eLi~M~~i~~V~~e~~~iK~~~CI~ik~k~~~k~ 77 (116)
T cd01240 2 DCIVHGYIKKLGGPFLSQWQTRYFKLYPNRLELYGESE----ANKPELITMDQIEDVSVEFQQIKEENCILLKIRDEKKI 77 (116)
T ss_pred ceEEeeehhhhCCHHHHHHHHHHheeCcceeeeccccc----ccCCcEEEeehhhhcchhheeeccCceEEEEEcCCceE
Confidence 6799999999875 668999999999999999964432 2355666666655444332223556788887765 668
Q ss_pred EEEcCCHHHHHHHHHHHHHHHHhh
Q 032301 104 YFIADSEKEKEDWINSIGRSIVQH 127 (143)
Q Consensus 104 ~~~a~s~~e~~~W~~al~~~~~~~ 127 (143)
++.++|..+..+|...|+.+-..+
T Consensus 78 vlt~~d~i~l~qW~~elr~a~r~S 101 (116)
T cd01240 78 VLTNSDEIELKQWKKELRDAHRES 101 (116)
T ss_pred EEecCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999998876543
No 51
>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.73 E-value=7.3e-07 Score=54.53 Aligned_cols=92 Identities=17% Similarity=0.254 Sum_probs=68.7
Q ss_pred CCCceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCC---e
Q 032301 25 SNPERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRT---E 101 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~---~ 101 (143)
++.+++|.+...+. -+.|++.|-+..|.+.+.... .-.....|.+++....+..+ ..++.|.|.... .
T Consensus 2 geLlleg~l~~~~~----~~eR~vFLFe~~ll~~K~~~~--~y~~K~~i~~~~l~i~e~~~---~d~~~F~v~~~~~p~~ 72 (97)
T cd01222 2 GDLLLEGRFREHGG----GKPRLLFLFQTMLLIAKPRGD--KYQFKAYIPCKNLMLVEHLP---GEPLCFRVIPFDDPKG 72 (97)
T ss_pred CceeeeceEEeecC----CCceEEEEecccEEEEEecCC--eeEEEEEEEecceEEecCCC---CCCcEEEEEecCCCce
Confidence 45678888875543 356999999999999887652 33455677777754444333 347999997654 6
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHHH
Q 032301 102 TMYFIADSEKEKEDWINSIGRSIV 125 (143)
Q Consensus 102 ~~~~~a~s~~e~~~W~~al~~~~~ 125 (143)
.+.|+|.|.++.+.|+++|+.++.
T Consensus 73 ~~~l~A~s~e~K~~W~~~i~~~i~ 96 (97)
T cd01222 73 ALQLTARNREEKRIWTQQLKRAML 96 (97)
T ss_pred EEEEEecCHHHHHHHHHHHHHHhh
Confidence 899999999999999999998874
No 52
>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain. Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.71 E-value=1.2e-06 Score=54.32 Aligned_cols=96 Identities=16% Similarity=0.174 Sum_probs=70.6
Q ss_pred CceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCC-CCCCcceEEeCCceEEeecCccc-----CCCcceEEEEeCC
Q 032301 27 PERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVT-RASKPRGVIPVASCLTVKGAEDV-----LNKQYAFELSTRT 100 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~-~~~~~~~~i~l~~~~~v~~~~~~-----~~~~~~f~i~~~~ 100 (143)
.+++|-|.+.+...+.=+.|++.|-++.|.|.|..... ..-.-.+.|.++.+.++...+.. ..-+++|.|....
T Consensus 2 li~~Gel~~~s~~~g~~q~R~~FLFD~~LI~CKkd~~r~~~~~yKgri~l~~~~I~d~~Dg~~~~~~~~~knafkl~~~~ 81 (109)
T cd01224 2 LFLQGEATRQKQNKGWNSSRVLFLFDHQMVLCKKDLIRRDHLYYKGRIDLDRCEVVNIRDGKMFSSGHTIKNSLKIYSES 81 (109)
T ss_pred ceEeeeEEEEecccCCcccEEEEEecceEEEEecccccCCcEEEEEEEEcccEEEEECCCCccccCCceeEEEEEEEEcC
Confidence 47899999886432233689999999999999965421 12345688999987665543321 1237899999876
Q ss_pred --eEEEEEcCCHHHHHHHHHHHHH
Q 032301 101 --ETMYFIADSEKEKEDWINSIGR 122 (143)
Q Consensus 101 --~~~~~~a~s~~e~~~W~~al~~ 122 (143)
..+.|+|.|.++...|+.||..
T Consensus 82 ~~~~~~f~~Kt~e~K~~Wm~a~~~ 105 (109)
T cd01224 82 TDEWYLFSFKSAERKHRWLSAFAL 105 (109)
T ss_pred CCeEEEEEECCHHHHHHHHHHHHH
Confidence 6799999999999999999853
No 53
>cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool/Pix contains an N-terminal SH3 domain followed by a RhoGEF (DH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.71 E-value=6.7e-07 Score=55.27 Aligned_cols=102 Identities=18% Similarity=0.248 Sum_probs=75.5
Q ss_pred cccCCCceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCC-
Q 032301 22 EFWSNPERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRT- 100 (143)
Q Consensus 22 ~~~~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~- 100 (143)
...+.++..+-+..+......=..||++|....|.+......-..-.-.+.++|.+..+ ...++..+.++.|.|..+.
T Consensus 7 ~~lG~vi~mS~V~~~~~~~qe~~eRyLvLFp~~LlilS~s~r~sGf~yqGkLPL~~i~v-~~lEd~e~~~~aFeI~G~li 85 (111)
T cd01225 7 KTLGNVIHMSQVAVQYGAGEEKRERYLVLFPNVLLMLSASPRMSGFIYQGKLPLTGIIV-TRLEDTEALKNAFEISGPLI 85 (111)
T ss_pred hhcCceEEEEEEEEecCCccccceeEEEEcCceEEEEEcCCCccceEEeeeecccccEE-echHhccCccceEEEeccCc
Confidence 34566777777777654445567899999999887776533211334568899999644 4445555779999999887
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHH
Q 032301 101 ETMYFIADSEKEKEDWINSIGRSI 124 (143)
Q Consensus 101 ~~~~~~a~s~~e~~~W~~al~~~~ 124 (143)
..+.+.|.+++|+.+|+..|++.+
T Consensus 86 ~~i~v~C~~~~e~~~Wl~hL~~~~ 109 (111)
T cd01225 86 ERIVVVCNNPQDAQEWVELLNANN 109 (111)
T ss_pred CcEEEEeCCHHHHHHHHHHHHhhc
Confidence 789999999999999999998743
No 54
>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.71 E-value=4.4e-07 Score=54.08 Aligned_cols=87 Identities=18% Similarity=0.270 Sum_probs=66.7
Q ss_pred CceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCc-eEEeecCcccCCCcceEEEEeCCeEEEE
Q 032301 27 PERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVAS-CLTVKGAEDVLNKQYAFELSTRTETMYF 105 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~-~~~v~~~~~~~~~~~~f~i~~~~~~~~~ 105 (143)
+++.|.+.++.+. .+++|-++|++.--.+|-++. .....+.|+++. ...++. .....|.|.+|+++|+|
T Consensus 1 Il~~g~v~Kr~gl--f~kkR~LiLTd~PrL~yvdp~---~~~~KgeIp~s~~~l~v~~-----~~~~~F~I~Tp~rty~l 70 (89)
T cd01262 1 ILKIGAVKKRKGL--FAKKRQLILTNGPRLIYVDPV---KKVVKGEIPWSDVELRVEV-----KNSSHFFVHTPNKVYSF 70 (89)
T ss_pred Cceeeeeeehhcc--ccceeeEEEecCceEEEEcCC---cCeEEeEecccccceEEEE-----ecCccEEEECCCceEEE
Confidence 3678999988764 679999999976655565555 456789999998 555544 33479999999999999
Q ss_pred EcCCHHHHHHHHHHHHHHH
Q 032301 106 IADSEKEKEDWINSIGRSI 124 (143)
Q Consensus 106 ~a~s~~e~~~W~~al~~~~ 124 (143)
. +-...+..|+.+|..+.
T Consensus 71 e-D~~~~a~~W~~~I~~~~ 88 (89)
T cd01262 71 E-DPKGRASQWKKAIEDLQ 88 (89)
T ss_pred E-CCCCCHHHHHHHHHHHh
Confidence 6 33578899999998763
No 55
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=98.70 E-value=1.6e-07 Score=72.75 Aligned_cols=98 Identities=15% Similarity=0.317 Sum_probs=65.9
Q ss_pred CCCceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeC---CceEEeecCcccCCCcceEEEEeCC-
Q 032301 25 SNPERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPV---ASCLTVKGAEDVLNKQYAFELSTRT- 100 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l---~~~~~v~~~~~~~~~~~~f~i~~~~- 100 (143)
.++...||+.+.+... .|++|||.+.++.+.................+.+ .++..+... ....++++|.|.+..
T Consensus 375 sDv~~~G~l~k~~~~~-~wk~ry~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~v~pv~~~-~~~~~~~~~~i~~~~~ 452 (478)
T PTZ00267 375 SDVTHGGYLYKYSSDM-RWKKRYFYIGNGQLRISLSENPENDGVAPKSVNLETVNDVFPVPEV-YSQKHPNQLVLWFNNG 452 (478)
T ss_pred CCcccceEEeccCCCc-chhhheEEecCCceEEEeccccccCCCCCccccHHHhcccccccHH-hcCCCCceEEEEecCC
Confidence 4678899999987544 5999999998877766543221111222222333 333333111 123568999998754
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHH
Q 032301 101 ETMYFIADSEKEKEDWINSIGRSI 124 (143)
Q Consensus 101 ~~~~~~a~s~~e~~~W~~al~~~~ 124 (143)
+.++|.|+|.+++++|+.+|+.++
T Consensus 453 ~~~~~~~~~~~~~~~W~~~~~~~~ 476 (478)
T PTZ00267 453 QKIIAYAKTAEDRDQWISKFQRAC 476 (478)
T ss_pred cEEEEecCChHHHHHHHHHHHHHh
Confidence 778899999999999999999875
No 56
>KOG0932 consensus Guanine nucleotide exchange factor EFA6 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.68 E-value=1.6e-08 Score=77.77 Aligned_cols=103 Identities=24% Similarity=0.364 Sum_probs=73.4
Q ss_pred CCCceEEEEEEe------C----CCCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEE-----eecCcccCC
Q 032301 25 SNPERSGWLTKQ------G----EYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLT-----VKGAEDVLN 89 (143)
Q Consensus 25 ~~~~~~G~L~k~------~----~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~-----v~~~~~~~~ 89 (143)
...-+.|+|.++ + .+.+.|+.-|-+|+|..|++-+++-.. ...+.--.|.+... .....++.+
T Consensus 504 a~~Yk~G~L~RK~had~DgkKTPrGkRgWk~fya~LkG~vLYlqkDey~p--~kalse~~lknavsvHHALAt~AtdY~K 581 (774)
T KOG0932|consen 504 AATYKSGFLARKYHADMDGKKTPRGKRGWKMFYAVLKGMVLYLQKDEYKP--GKALSESDLKNAVSVHHALATPATDYSK 581 (774)
T ss_pred chhhhhhhhhhhhhccccCCcCCccchhHHHHHHHHhhheEEeeccccCc--ccchhhhhhhhhhhhhhhhcCCCccccc
Confidence 345678999765 1 134689999999999998887766421 11122222333222 234567788
Q ss_pred CcceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhhCC
Q 032301 90 KQYAFELSTRT-ETMYFIADSEKEKEDWINSIGRSIVQHSR 129 (143)
Q Consensus 90 ~~~~f~i~~~~-~~~~~~a~s~~e~~~W~~al~~~~~~~~~ 129 (143)
++|+|.+.+.+ +.++|+|.+.++|+.|+..|+.+.+....
T Consensus 582 Kp~Vf~lrtAdwrv~LFQaps~eEmqsWi~rIN~vAA~fSa 622 (774)
T KOG0932|consen 582 KPHVFKLRTADWRVFLFQAPSQEEMQSWIERINLVAAAFSA 622 (774)
T ss_pred CCceEEEEeccceeEEEeCCCHHHHHHHHHHHHHHHHhccC
Confidence 99999999987 99999999999999999999988775443
No 57
>KOG3751 consensus Growth factor receptor-bound proteins (GRB7, GRB10, GRB14) [Signal transduction mechanisms]
Probab=98.66 E-value=9.3e-08 Score=72.98 Aligned_cols=100 Identities=19% Similarity=0.367 Sum_probs=67.2
Q ss_pred CCceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCc--c--cCCCcceEEEEeCC-
Q 032301 26 NPERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAE--D--VLNKQYAFELSTRT- 100 (143)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~--~--~~~~~~~f~i~~~~- 100 (143)
-+.++|+|+.+....+.||+.||||+...|+|+....-+.-+.....-++.+-.+..... . .....|+|.|....
T Consensus 316 ~pei~GfL~~K~dgkKsWKk~yf~LR~SGLYys~K~tsk~~r~Lq~l~~~~~snVYt~i~~rKkyksPTd~~f~~K~~~~ 395 (622)
T KOG3751|consen 316 PPEIQGFLYLKEDGKKSWKKHYFVLRRSGLYYSTKGTSKEPRHLQCLADLHSSNVYTGIGGRKKYKSPTDYGFCIKPNKL 395 (622)
T ss_pred CccccceeeecccccccceeEEEEEecCcceEccCCCCCCchhhHHHHhcccCceEEeecchhccCCCCCceEEeeeccc
Confidence 367899999998888999999999999999998766522111111222333321111111 1 11236888887532
Q ss_pred -----eEEEEEcCCHHHHHHHHHHHHHHHH
Q 032301 101 -----ETMYFIADSEKEKEDWINSIGRSIV 125 (143)
Q Consensus 101 -----~~~~~~a~s~~e~~~W~~al~~~~~ 125 (143)
.-.+|+|+++.-...|+.||+-+..
T Consensus 396 ~~~~r~lk~lCAEDe~t~~~WltAiRl~Ky 425 (622)
T KOG3751|consen 396 RNKRRFLKMLCAEDEQTRTCWLTAIRLLKY 425 (622)
T ss_pred cCcccceeeeecccchhHHHHHHHHHHHHH
Confidence 2368999999999999999997755
No 58
>cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exo84 is a subunit of the exocyt complex, which is important in intracellular trafficking. In metazoa, Exo84 has a PH domain towards its N-terminus. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.63 E-value=9.9e-07 Score=53.93 Aligned_cols=96 Identities=16% Similarity=0.133 Sum_probs=69.8
Q ss_pred ceEEEEEEeCCCCCCc-eeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCCeEEEEE
Q 032301 28 ERSGWLTKQGEYIKTW-RRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRTETMYFI 106 (143)
Q Consensus 28 ~~~G~L~k~~~~~~~w-~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~~~~~~~ 106 (143)
+++|-|...+...... ++..+.|-++.|.|-...... .-.-...++|.+. .+...++...-+++|.|.++.+++.++
T Consensus 3 i~~G~l~e~~~~~~kp~~rv~~FLfND~Lvva~~~~~~-ky~~~~~~~L~~i-~V~ni~D~~~~kNafki~t~~~s~i~q 80 (100)
T cd01226 3 ILYGELEEFDVETKKPVQRVMLFLLNDRLIVGNINAAG-KYVMESTYSLNSV-AVVNVKDRENAKKVLKLLIFPESRIYQ 80 (100)
T ss_pred EEcCcEEEechhhCCccceEEEEEeccEEEEEEecccc-eEEEEEEEehHHe-EEEecCCCcCcCceEEEEeCCccEEEE
Confidence 5667776665443333 345578888888776543311 3345678889986 444555555669999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHH
Q 032301 107 ADSEKEKEDWINSIGRSIV 125 (143)
Q Consensus 107 a~s~~e~~~W~~al~~~~~ 125 (143)
|+|.++..+|+..|++|..
T Consensus 81 aes~~~K~eWl~~le~a~~ 99 (100)
T cd01226 81 CESARIKTEWFEELEQAKR 99 (100)
T ss_pred eCCHHHHHHHHHHHHHHhc
Confidence 9999999999999998863
No 59
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.58 E-value=4.5e-08 Score=79.30 Aligned_cols=102 Identities=27% Similarity=0.548 Sum_probs=78.3
Q ss_pred CCceEEEEEEeCC-CCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCCeEEE
Q 032301 26 NPERSGWLTKQGE-YIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRTETMY 104 (143)
Q Consensus 26 ~~~~~G~L~k~~~-~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~~~~~ 104 (143)
.....|+|.++.. ..+.|.++||-..++.+.|+..... .......+|..|+ |...++...+++||.|.++.+++.
T Consensus 273 ~~~~~~~l~~k~~~~~~tw~r~~f~~q~~~l~~~~r~~~---~~~~~~~dL~~cs-vk~~~~~~drr~CF~iiS~tks~~ 348 (785)
T KOG0521|consen 273 GYRMEGYLRKKASNASKTWKRRWFSIQDGQLGYQHRGAD---AENVLIEDLRTCS-VKPDAEQRDRRFCFEIISPTKSYL 348 (785)
T ss_pred hhhhhhhhhhhcccchhhHHhhhhhhhcccccccccccc---ccccccccchhcc-ccCCcccccceeeEEEecCCcceE
Confidence 4556778887754 4689999999999888888776642 2225666677774 444444346899999999999999
Q ss_pred EEcCCHHHHHHHHHHHHHHHHhhCCCC
Q 032301 105 FIADSEKEKEDWINSIGRSIVQHSRSV 131 (143)
Q Consensus 105 ~~a~s~~e~~~W~~al~~~~~~~~~~~ 131 (143)
|+|+|+.+...|+.+|+..+.......
T Consensus 349 lQAes~~d~~~Wi~~i~nsi~s~l~~~ 375 (785)
T KOG0521|consen 349 LQAESEKDCQDWISALQNSILSALNSA 375 (785)
T ss_pred EecCchhHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999998766443
No 60
>PLN02866 phospholipase D
Probab=98.57 E-value=1.8e-06 Score=71.19 Aligned_cols=100 Identities=16% Similarity=0.374 Sum_probs=74.6
Q ss_pred CCCceEEEEEEe-----CC------C---------CCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceE-----
Q 032301 25 SNPERSGWLTKQ-----GE------Y---------IKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCL----- 79 (143)
Q Consensus 25 ~~~~~~G~L~k~-----~~------~---------~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~----- 79 (143)
+...+||++.++ .+ + ...|+++|++|++..|.|.+++. ...++.++.++...
T Consensus 180 g~K~~Eg~v~~r~~~~~~g~~~~~~~~~~~~~~~~~~~w~k~w~v~k~~~l~~~~~p~---~~~~~~v~lfD~~~~~~~~ 256 (1068)
T PLN02866 180 GPKLKEGYVMVKHLPKIPKSDDSRGCFPCCCFSCCNDNWQKVWAVLKPGFLALLEDPF---DAKPLDIIVFDVLPASNGN 256 (1068)
T ss_pred CCCcceeEEEEeccCCCCCCCccCCccccccCCeecCchheeEEEEeccEEEEEecCC---CCceeEEEEEecccccccC
Confidence 457789999988 11 1 13699999999999999998876 44577777665211
Q ss_pred ---Eee---cCcccCCCcceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 032301 80 ---TVK---GAEDVLNKQYAFELSTRTETMYFIADSEKEKEDWINSIGRSIVQH 127 (143)
Q Consensus 80 ---~v~---~~~~~~~~~~~f~i~~~~~~~~~~a~s~~e~~~W~~al~~~~~~~ 127 (143)
.+. ...+....+++|.|.+.++.+.|.|.|...+.+|+.+|+.+....
T Consensus 257 ~~~~~~~~~~~k~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~ai~~~~~~~ 310 (1068)
T PLN02866 257 GEGQISLAKEIKERNPLRFGFKVTCGNRSIRLRTKSSAKVKDWVAAINDAGLRP 310 (1068)
T ss_pred CCcceeecccccccCCCcceEEEecCceEEEEEECCHHHHHHHHHHHHHHHhcc
Confidence 011 111122447899999999999999999999999999999998543
No 61
>KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms]
Probab=98.49 E-value=3.8e-07 Score=70.42 Aligned_cols=106 Identities=19% Similarity=0.234 Sum_probs=79.6
Q ss_pred CccccCCCceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCC--CCCCcceEEeCCceEEeecCcccCCCcceEEEE
Q 032301 20 STEFWSNPERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVT--RASKPRGVIPVASCLTVKGAEDVLNKQYAFELS 97 (143)
Q Consensus 20 ~~~~~~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~--~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~ 97 (143)
-+++....+++|.+.|.....+..+.||++|.++.+.|.+..... ....+...+.+.++...+ .+....++.|.+.
T Consensus 265 IV~PsreLiKEG~l~Kis~k~~~~qeRylfLFNd~~lyc~~r~~~~~~k~~~r~~~s~~~~~v~~--~~~~~~~~tF~~~ 342 (623)
T KOG4424|consen 265 IVSPSRELIKEGQLQKISAKNGTTQERYLFLFNDILLYCKPRKRLPGSKYEVRARCSISHMQVQE--DDNEELPHTFILT 342 (623)
T ss_pred ccCcHHHHhhccceeeeeccCCCcceeEEEEehhHHHhhhhhhhcccceeccceeeccCcchhcc--cccccCCceEEEe
Confidence 356666789999999998767889999999999888887654310 012233444555543322 2333568999999
Q ss_pred eCCeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 032301 98 TRTETMYFIADSEKEKEDWINSIGRSIVQH 127 (143)
Q Consensus 98 ~~~~~~~~~a~s~~e~~~W~~al~~~~~~~ 127 (143)
.+.+.+-|+|.|.++..+|+++|+.+|..+
T Consensus 343 G~~r~vel~a~t~~ek~eWv~~I~~~Id~~ 372 (623)
T KOG4424|consen 343 GKKRGVELQARTEQEKKEWVQAIQDAIDKH 372 (623)
T ss_pred cccceEEeecCchhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998854
No 62
>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis. During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex
Probab=98.47 E-value=1.1e-05 Score=51.58 Aligned_cols=97 Identities=19% Similarity=0.278 Sum_probs=63.1
Q ss_pred eEEEEEEeCCC-----CCCceeEEEEEECCe--EEEEecCCCCC--CCCcceEEeCCceEEeecCccc--CC----Ccce
Q 032301 29 RSGWLTKQGEY-----IKTWRRRWFVLKQGK--LFWFKESTVTR--ASKPRGVIPVASCLTVKGAEDV--LN----KQYA 93 (143)
Q Consensus 29 ~~G~L~k~~~~-----~~~w~~r~~vL~~~~--l~~~~~~~~~~--~~~~~~~i~l~~~~~v~~~~~~--~~----~~~~ 93 (143)
.-.||+|-... .....+|||.|.... |+++....... .......+.|..+..|...... .. ..++
T Consensus 11 ~G~~l~Ky~r~~~~~~~~~~h~R~fwv~~~~~~L~Ws~~~p~~~~~~~~~~~~i~I~~v~~V~~~~~~~~~~~~~~~~~s 90 (123)
T PF12814_consen 11 IGEWLYKYTRKGRSGISEKPHRRYFWVDPYTRTLYWSSSNPKSENPSESKAKSIRIESVTEVKDGNPSPPGLKKPDHNKS 90 (123)
T ss_pred cccEEEEEcccccCccCCCcEEEEEEEeCCCCEEEecCCCCCccccccccccceEEeeeEEecCCCCCCccccccccceE
Confidence 34677775432 247899999998754 45544322100 1112345666665555433211 11 3578
Q ss_pred EEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 032301 94 FELSTRTETMYFIADSEKEKEDWINSIGRSIV 125 (143)
Q Consensus 94 f~i~~~~~~~~~~a~s~~e~~~W~~al~~~~~ 125 (143)
|.|.++++++-|.|.+.++.+-|+.+|+..+.
T Consensus 91 i~i~t~~R~L~l~a~s~~~~~~W~~aL~~L~~ 122 (123)
T PF12814_consen 91 IIIVTPDRSLDLTAPSRERHEIWFNALRYLLQ 122 (123)
T ss_pred EEEEcCCeEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 88899999999999999999999999987654
No 63
>KOG3543 consensus Ca2+-dependent activator protein [Signal transduction mechanisms]
Probab=98.44 E-value=6.8e-08 Score=75.48 Aligned_cols=109 Identities=22% Similarity=0.412 Sum_probs=84.3
Q ss_pred CCceEEEEEEeCC-CCCCceeEEEEEECCeEEEEecCCC-CCCCCcceEEeCCceEEeec--CcccCCCcceEEEEeCCe
Q 032301 26 NPERSGWLTKQGE-YIKTWRRRWFVLKQGKLFWFKESTV-TRASKPRGVIPVASCLTVKG--AEDVLNKQYAFELSTRTE 101 (143)
Q Consensus 26 ~~~~~G~L~k~~~-~~~~w~~r~~vL~~~~l~~~~~~~~-~~~~~~~~~i~l~~~~~v~~--~~~~~~~~~~f~i~~~~~ 101 (143)
...++|||+..|. ..+.|++|||||....-+.|.-+.. .+...|...+.|+|.++... .+...++++-|.....+.
T Consensus 463 nmkhsgylyaig~nvwkrwkkrffvlvqvsqytfamcsyrekkaepqel~qldgytvdytdp~pglqgg~~ffnavkegd 542 (1218)
T KOG3543|consen 463 NMKHSGYLYAIGRNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELIQLDGYTVDYTDPSPGLQGGKHFFNAVKEGD 542 (1218)
T ss_pred ccccceeehhhhhHHHHHhHhhEEEEEEhhhhhhHhhhhhhcccChHHHhhccCeeeccCCCCCccccchHHHHHhccCc
Confidence 4567899998865 3478999999998765555554442 12567999999999765433 233456688898888899
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHHHhhCCCCCCC
Q 032301 102 TMYFIADSEKEKEDWINSIGRSIVQHSRSVTDS 134 (143)
Q Consensus 102 ~~~~~a~s~~e~~~W~~al~~~~~~~~~~~~~~ 134 (143)
+..|..++++|..-|+.|+-+|.-+..++.++.
T Consensus 543 tvifasddeqdr~lwvqamyratgqsykpvpp~ 575 (1218)
T KOG3543|consen 543 TVIFASDDEQDRHLWVQAMYRATGQSYKPVPPK 575 (1218)
T ss_pred eEEeccCchhhhhHHHHHHHHhhCCcCCCCCch
Confidence 999999999999999999999999888776655
No 64
>KOG0248 consensus Cytoplasmic protein Max-1, contains PH, MyTH4 and FERM domains [Cytoskeleton]
Probab=98.21 E-value=1.9e-06 Score=67.98 Aligned_cols=97 Identities=28% Similarity=0.560 Sum_probs=78.5
Q ss_pred CceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCCeEEEEE
Q 032301 27 PERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRTETMYFI 106 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~~~~~~~ 106 (143)
..+.|++.+.+...+.|++||||++...+.||+.+... ...|.+.++++....... .+..+.|++++....++|-
T Consensus 249 ~ekSgy~~~~~s~~k~lkrr~~v~k~gqi~~y~~~~~~-~~~p~s~~d~~s~~~~~~----~~~s~~fqli~~t~~~~~~ 323 (936)
T KOG0248|consen 249 MEKSGYWTQLTSRIKSLKRRYVVFKNGQISFYRKHNNR-DEEPASKIDIRSVTKLEQ----QGAAYAFQLITSTDKMNFM 323 (936)
T ss_pred hhcccchhcchHHHHHHHhHheeeccceEEEEEcCCCc-cccccCcccccccceeec----cchhHHhhhhhhceeEEEe
Confidence 45678888877677899999999999999999988753 456778888875333322 2457899999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHhhC
Q 032301 107 ADSEKEKEDWINSIGRSIVQHS 128 (143)
Q Consensus 107 a~s~~e~~~W~~al~~~~~~~~ 128 (143)
++++.-..+|++.|+.++....
T Consensus 324 ~~s~~lt~dw~~iL~~~iKv~~ 345 (936)
T KOG0248|consen 324 TESERTTHDWVTILSAAIKATT 345 (936)
T ss_pred ccChhhhhhhHHHHHHHHHHHh
Confidence 9999999999999999887433
No 65
>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain. Ephexin Pleckstrin homology (PH) domain. Ephexin contains a RhoGEF (DH) followed by a PH domain and an SH3 domain. The ephexin PH domain is believed to act with the DH domain in mediating protein-protein interactions with the Eph receptor. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.15 E-value=5.8e-05 Score=48.12 Aligned_cols=93 Identities=19% Similarity=0.291 Sum_probs=54.4
Q ss_pred ceEEEEEEeCCC--------CCCceeEEEEEECCeEEEEecCCCCC----CCCcceEEeCCceEEeecCc----ccCCCc
Q 032301 28 ERSGWLTKQGEY--------IKTWRRRWFVLKQGKLFWFKESTVTR----ASKPRGVIPVASCLTVKGAE----DVLNKQ 91 (143)
Q Consensus 28 ~~~G~L~k~~~~--------~~~w~~r~~vL~~~~l~~~~~~~~~~----~~~~~~~i~l~~~~~v~~~~----~~~~~~ 91 (143)
++.|.|...... ...-+.+|+.|..+.|.|.+.+.... +..+...+.+..+....... .....+
T Consensus 4 vK~GEL~~l~~~~~~~~~~~k~~~~~vylfLFnDlLl~tkkK~~~~f~V~dy~~r~~l~V~~~e~~~~~~~~~~~~~~~~ 83 (125)
T cd01221 4 VKRGELTQLEERGSSNILRKKLKARTIYLFLFNDLLLITKKKLGSTFVVFDYAPRSFLRVEKIEPDNQKIPLGSNLVGRP 83 (125)
T ss_pred EEEeeEEEEeccCCcchhcccccCCcEEEEEecceEEEEEecCCCeEEEEeeccccceEEeecccccccccccccccCCC
Confidence 466777654211 11356789999999999987664210 01122222222211110000 001347
Q ss_pred ceEEEEe------CCeEEEEEcCCHHHHHHHHHHH
Q 032301 92 YAFELST------RTETMYFIADSEKEKEDWINSI 120 (143)
Q Consensus 92 ~~f~i~~------~~~~~~~~a~s~~e~~~W~~al 120 (143)
|.|+|.. ....+.|+|+|+.|+.+|+.||
T Consensus 84 ~~F~ltLl~N~~gk~~el~L~a~S~sdr~rWi~Al 118 (125)
T cd01221 84 NLFLLTLLRNADDKQAELLLSADSQSDRERWLSAL 118 (125)
T ss_pred ceEEEEeeccCCCCEEEEEEECCCHHHHHHHHHhc
Confidence 8999963 2267999999999999999998
No 66
>KOG3531 consensus Rho guanine nucleotide exchange factor CDEP [Signal transduction mechanisms]
Probab=98.12 E-value=4.9e-07 Score=72.41 Aligned_cols=95 Identities=24% Similarity=0.473 Sum_probs=76.9
Q ss_pred eEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeec-CcccCCCcceEEEEeCCeEEEEEc
Q 032301 29 RSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKG-AEDVLNKQYAFELSTRTETMYFIA 107 (143)
Q Consensus 29 ~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~-~~~~~~~~~~f~i~~~~~~~~~~a 107 (143)
..|+|..+=.....|++.|+|.+.-.|++||+-+ +..++.+++|-+.++-.+ .++...+.++|.+...+..|+|.|
T Consensus 926 Lsg~LlrkfknssgwqkLwvvft~fcl~fyKS~q---D~~~laslPlLgysvs~P~~~d~i~K~~vfkl~fk~hvyffra 1002 (1036)
T KOG3531|consen 926 LSGYLLRKFKNSSGWQKLWVVFTNFCLFFYKSHQ---DSEPLASLPLLGYSVSIPAEPDPIQKDYVFKLKFKSHVYFFRA 1002 (1036)
T ss_pred hhHHHHHHhhccccceeeeeeecceeeEeecccc---cccccccccccccccCCCCCCCCcchhheeeeehhhhHHHHhh
Confidence 4566655534456899999999999999999998 677899999988654433 334567789999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHh
Q 032301 108 DSEKEKEDWINSIGRSIVQ 126 (143)
Q Consensus 108 ~s~~e~~~W~~al~~~~~~ 126 (143)
++..-.++|+..|+.+..-
T Consensus 1003 es~yt~~rw~evi~~a~~s 1021 (1036)
T KOG3531|consen 1003 ESYYTFERWMEVITDAPSS 1021 (1036)
T ss_pred hhhhhhhhHHHHhhcCCcc
Confidence 9999999999999766543
No 67
>cd01223 PH_Vav Vav pleckstrin homology (PH) domain. Vav pleckstrin homology (PH) domain. Vav acts as a guanosine nucleotide exchange factor(GEF) for Rho/Rac proteins. Mammalian Vav proteins consist of a calponin homology (CH) domain, an acidic region, a rho-GEF (DH)domain, a PH domain, a Zinc finger region and an SH2 domain, flanked by two SH3 domains. In invertebrates such as Drosophila and C.elegans, Vav is missing the N-terminal SH3 domain . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.00 E-value=0.00017 Score=45.25 Aligned_cols=101 Identities=13% Similarity=0.203 Sum_probs=65.7
Q ss_pred CCceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCCC---CCcceEEeCCceEEeecC-ccc----CCCcceEEEE
Q 032301 26 NPERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRA---SKPRGVIPVASCLTVKGA-EDV----LNKQYAFELS 97 (143)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~---~~~~~~i~l~~~~~v~~~-~~~----~~~~~~f~i~ 97 (143)
.+..-|.|..+....+.-+.||..|-+..+.+.+....... -.-...+.|....+.... .+. ..-.|+|.|.
T Consensus 3 R~~~DGelk~k~~~~~k~k~RyiFLFDk~lI~CK~~~~~~~~~~Y~~Ke~~~l~~~~I~~~~~~d~~~~~~~~~~~f~L~ 82 (116)
T cd01223 3 RPLLDGEVRIKASEDQKTKLRYIFLFDKAVIVCKALGDNTGDMQYTYKDIHDLADYKIENNPSRDTEGRDTRWKYGFYLA 82 (116)
T ss_pred ccccCCceEEeEeccCCCceeEEEEecceEEEEEecCCCCCCccEEhHHhhhhheeeeEecCccCcccCCcceEEEEEEE
Confidence 34556666666544455679999999999999886542111 112234444543222211 111 1347889999
Q ss_pred eCC--eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 032301 98 TRT--ETMYFIADSEKEKEDWINSIGRSIVQ 126 (143)
Q Consensus 98 ~~~--~~~~~~a~s~~e~~~W~~al~~~~~~ 126 (143)
... ..+.|+|.|+++...|+.+|..|+..
T Consensus 83 ~~~~~~~~~f~~Ktee~K~kWm~al~~a~sn 113 (116)
T cd01223 83 HKQGKTGFTFYFKTEHLRKKWLKALEMAMSN 113 (116)
T ss_pred ecCCCccEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 866 46999999999999999999998864
No 68
>KOG3549 consensus Syntrophins (type gamma) [Extracellular structures]
Probab=97.98 E-value=1.3e-05 Score=59.00 Aligned_cols=116 Identities=18% Similarity=0.267 Sum_probs=82.5
Q ss_pred hhhhHHhcccccCCCCCCccc-------cCCCceEEEEEEeCC---CCCCceeEEEEEECCeEEEEecCCCCCCCCcceE
Q 032301 3 SLWRAISGQTNQLSDYDSTEF-------WSNPERSGWLTKQGE---YIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGV 72 (143)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~G~L~k~~~---~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~ 72 (143)
+=|..++..+........+.. ...+++.||...+-. ....++++|..|+|..++.|..+. ..+
T Consensus 250 ~dWL~ait~Ni~~LT~~nmK~~Nrnf~v~~qivyMGWvne~~q~~~s~q~y~P~FLaLkG~~~y~F~tPP-------v~t 322 (505)
T KOG3549|consen 250 SDWLKAITDNIVGLTHLNMKLYNRNFAVGEQIVYMGWVNEGVQNNISWQSYKPRFLALKGTEVYLFETPP-------VNT 322 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCccceEEEeeeccccccCcccccccCceeEEecCcEEEEEcCCC-------cch
Confidence 457777777766554433322 224789999987632 335789999999999999998875 333
Q ss_pred EeCCceEE-----------eecCcccCCCcceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHH
Q 032301 73 IPVASCLT-----------VKGAEDVLNKQYAFELSTRT-ETMYFIADSEKEKEDWINSIGRSIV 125 (143)
Q Consensus 73 i~l~~~~~-----------v~~~~~~~~~~~~f~i~~~~-~~~~~~a~s~~e~~~W~~al~~~~~ 125 (143)
.++.++.. +...+-...+++||.|...+ +..||..+...|+..|-++++.|+.
T Consensus 323 ~dw~rAe~ty~vye~mfki~Kdsd~~D~R~~CF~~qs~~ge~~yfsVEl~seLa~wE~sfq~Atf 387 (505)
T KOG3549|consen 323 ADWSRAEVTYKVYETMFKIVKDSDTVDSRQHCFLLQSSGGEPRYFSVELRSELARWENSFQAATF 387 (505)
T ss_pred hhhhhhhhhHHHHHHHHHHhccccccccccceEEEEcCCCCceEEEEehhhHHHHHHHHHhhHHh
Confidence 34433322 11222235789999999876 7899999999999999999998876
No 69
>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain. Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.97 E-value=0.00046 Score=43.49 Aligned_cols=96 Identities=16% Similarity=0.258 Sum_probs=60.2
Q ss_pred CceEEEEEEeCC---CCCCceeEEEEEECCeEEEEecCCCCCC-CCc----ceEEeCCceEEeecCcccCCCcceEEEE-
Q 032301 27 PERSGWLTKQGE---YIKTWRRRWFVLKQGKLFWFKESTVTRA-SKP----RGVIPVASCLTVKGAEDVLNKQYAFELS- 97 (143)
Q Consensus 27 ~~~~G~L~k~~~---~~~~w~~r~~vL~~~~l~~~~~~~~~~~-~~~----~~~i~l~~~~~v~~~~~~~~~~~~f~i~- 97 (143)
.+++|.+..-.+ ..+.-+.|.+.|-...|.+.+....... ..+ ...|.++.. .++...+ +.+..|.|.
T Consensus 5 Ll~Q~~f~v~~~~~~~~~K~~eR~vFLFe~~lvfsk~~~~~~~~~~~~Y~yK~~ikls~l-~l~e~v~--gd~~kF~i~~ 81 (114)
T cd01232 5 LLLQDTFQVWDPKAGLIQKGRERRVFLFEQSIIFAKEVKKKKQFGNPKYIYKSKLQVSKM-GLTEHVE--GDPCRFALWS 81 (114)
T ss_pred eEEEccEEEEeCCccccCCCceeEEEEeeceEEEEEEeccCCCCCceeEEEecceeeeee-EeEEccC--CCCceEEEEe
Confidence 455555443321 2345678888898888888876542111 112 255666664 3333332 334556664
Q ss_pred -eCC---eEEEEEcCCHHHHHHHHHHHHHHHH
Q 032301 98 -TRT---ETMYFIADSEKEKEDWINSIGRSIV 125 (143)
Q Consensus 98 -~~~---~~~~~~a~s~~e~~~W~~al~~~~~ 125 (143)
++. .+|.++|.|.+..+.|+..|+.++.
T Consensus 82 ~~~~~~~~~~ilqA~s~e~K~~W~~~I~~il~ 113 (114)
T cd01232 82 GDPPISDNRIILKANSQETKQEWVKKIREILQ 113 (114)
T ss_pred CCCCCCceEEEEECCCHHHHHHHHHHHHHHhh
Confidence 443 6899999999999999999998764
No 70
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=97.94 E-value=6.6e-05 Score=58.67 Aligned_cols=100 Identities=19% Similarity=0.313 Sum_probs=59.2
Q ss_pred CCCceEEEEEEeCCCCCCceeEEEEEECCe-----EEEEecCCCC---------CCCCcceEE--eCCceEEeecCc-cc
Q 032301 25 SNPERSGWLTKQGEYIKTWRRRWFVLKQGK-----LFWFKESTVT---------RASKPRGVI--PVASCLTVKGAE-DV 87 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~-----l~~~~~~~~~---------~~~~~~~~i--~l~~~~~v~~~~-~~ 87 (143)
...+++|.+.+.+.. ..|++||+++.+.. +.--..++.. ++..-...| +++..+.+-+.+ .+
T Consensus 371 ~~~~~~g~~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (496)
T PTZ00283 371 GLTLYEGIVKKQSSD-LSWKRRYLCIRGELEKGETLTVDVAPKFKSLDLVLAVSKDTLEQQCISTPFSDLEDVFPVPSKY 449 (496)
T ss_pred CceeeeeEEecccCC-cccceeEEEEeeecccCceeecCCCccchhhhhhhhhhhhhhhhhcccCchhhhcccccccHHh
Confidence 346788998887654 35999999987432 1110010000 000000111 222222222222 22
Q ss_pred C--CCcceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHH
Q 032301 88 L--NKQYAFELSTRT-ETMYFIADSEKEKEDWINSIGRSIV 125 (143)
Q Consensus 88 ~--~~~~~f~i~~~~-~~~~~~a~s~~e~~~W~~al~~~~~ 125 (143)
. ..+|+|.+.+.. +.+.|+|.+.+++..|+++|+.++-
T Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (496)
T PTZ00283 450 TGSNAAHVFAVAFKTGRRLLFQARSDPERDAWMQKIQSVLG 490 (496)
T ss_pred hCCCCCcEEEEEecCCcEEEEecCCchhHHHHHHHHHHhcC
Confidence 2 368999998765 8899999999999999999998764
No 71
>PF15406 PH_6: Pleckstrin homology domain
Probab=97.86 E-value=9.9e-05 Score=45.46 Aligned_cols=65 Identities=18% Similarity=0.407 Sum_probs=50.2
Q ss_pred EECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCCeEEEEEcCCHHHHHHHHHHHH
Q 032301 50 LKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRTETMYFIADSEKEKEDWINSIG 121 (143)
Q Consensus 50 L~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~~~~~~~a~s~~e~~~W~~al~ 121 (143)
-+|..|++|....+ ...|.++|+|..++.+.. ...+-|.+...+..+.|.|.|..|...|+.+|+
T Consensus 46 qTGKGLLF~~K~~d--ka~P~GiinLadase~~~-----~g~~kF~f~~~G~khtF~A~s~aERD~Wv~~lk 110 (112)
T PF15406_consen 46 QTGKGLLFFSKAED--KASPSGIINLADASEPEK-----DGSNKFHFKIKGHKHTFEAASAAERDNWVAQLK 110 (112)
T ss_pred ccCceEEEEecccc--ccCCcceEehhhcccccc-----CCCceEEEEeCCceeeeecCCHHHhccHHHHhh
Confidence 35777877765332 557999999988655433 345677777788889999999999999999985
No 72
>cd01231 PH_Lnk LNK-family Pleckstrin homology (PH) domain. LNK-family Pleckstrin homology (PH) domain. The Lnk family of proteins consists of Lnk, APS and SH2B. They are adaptor proteins consisting of a PH domain and an SH2 domain, which mediates signaling through growth factor receptors. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. The lnk family PH domain is likely involved in targeting of the adaptor proteins to the plasma membrane.
Probab=97.84 E-value=0.00016 Score=43.92 Aligned_cols=79 Identities=19% Similarity=0.393 Sum_probs=51.3
Q ss_pred CCCCceeEEEEEE----CCeEEEEecCCCCCCCCcceEEeCC------ceEEeecCcccCCCcceEEEEeCC-eEEEEEc
Q 032301 39 YIKTWRRRWFVLK----QGKLFWFKESTVTRASKPRGVIPVA------SCLTVKGAEDVLNKQYAFELSTRT-ETMYFIA 107 (143)
Q Consensus 39 ~~~~w~~r~~vL~----~~~l~~~~~~~~~~~~~~~~~i~l~------~~~~v~~~~~~~~~~~~f~i~~~~-~~~~~~a 107 (143)
....|++.-.+|. |..+.+|-.... +...|...+... .|+..+. ..+.++|.|...+ -.|+|.+
T Consensus 17 ~~~~WqkcRl~L~~~~gg~~le~~~~~pP-Kssrpk~~v~C~~I~EvR~tt~LEm----PD~~nTFvLK~~~~~eyI~Ea 91 (107)
T cd01231 17 SGARWQRGRLVLRKAVGGYMLEFYLPLPP-KSSKPKLQVACSSISEVRECTRLEM----PDNLYTFVLKVDDNTDIIFEV 91 (107)
T ss_pred CccccceeeEEEEecCCCceEEEEccCCC-CCCCCccccchhhhhhhhhcccccc----cCcccEEEEEecCCceEEEEc
Confidence 3458999888886 344555544111 134455444433 3333322 3467899998766 4689999
Q ss_pred CCHHHHHHHHHHHHH
Q 032301 108 DSEKEKEDWINSIGR 122 (143)
Q Consensus 108 ~s~~e~~~W~~al~~ 122 (143)
.|.++++.|+..|+.
T Consensus 92 ~d~~q~~SWla~Ir~ 106 (107)
T cd01231 92 GDEQQLNSWLAELRY 106 (107)
T ss_pred CCHHHHHHHHHHHhc
Confidence 999999999999974
No 73
>KOG1739 consensus Serine/threonine protein kinase GPBP [Signal transduction mechanisms; Defense mechanisms]
Probab=97.78 E-value=5.5e-05 Score=57.79 Aligned_cols=94 Identities=27% Similarity=0.504 Sum_probs=70.9
Q ss_pred CceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCCeEEEEE
Q 032301 27 PERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRTETMYFI 106 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~~~~~~~ 106 (143)
+..+|.|.+-......|+.||++|..+.|.||+++..+ .-.+.+.|.|..+...... .....|-|.......++.
T Consensus 24 ~e~~G~lskwtnyi~gwqdRyv~lk~g~Lsyykse~E~-~hGcRgsi~l~ka~i~ahE----fDe~rfdIsvn~nv~~lr 98 (611)
T KOG1739|consen 24 VERCGVLSKWTNYIHGWQDRYVVLKNGALSYYKSEDET-EHGCRGSICLSKAVITAHE----FDECRFDISVNDNVWYLR 98 (611)
T ss_pred hhhcceeeeeecccccccceEEEEcccchhhhhhhhhh-hcccceeeEeccCCccccc----chhheeeeEeccceeeeh
Confidence 34455555554445689999999999999999988643 4457889998875332221 335788888888889999
Q ss_pred cCCHHHHHHHHHHHHHHHH
Q 032301 107 ADSEKEKEDWINSIGRSIV 125 (143)
Q Consensus 107 a~s~~e~~~W~~al~~~~~ 125 (143)
+.+..+.+.|+.+|.-...
T Consensus 99 a~~~~hr~~w~d~L~wmk~ 117 (611)
T KOG1739|consen 99 AQDPDHRQQWIDALEWMKT 117 (611)
T ss_pred hcCcHHHHHHHHHHHHHhh
Confidence 9999999999999986655
No 74
>cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. The BCR-related protein has a RhoGEF(DH) domain followed by a PH domain, a C2 domain and a RhoGAP domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.77 E-value=0.00038 Score=41.98 Aligned_cols=86 Identities=17% Similarity=0.239 Sum_probs=60.4
Q ss_pred CceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCC---CC-CCCCcceEEeCCceEEeecCcccCCCcceEEEE-eCCe
Q 032301 27 PERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKEST---VT-RASKPRGVIPVASCLTVKGAEDVLNKQYAFELS-TRTE 101 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~---~~-~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~-~~~~ 101 (143)
.+.+|+|.+.. .+.-+.|.|.|.++.|.|-+-.. .+ ..-...-.|+|.... +...+ |.+. ++.+
T Consensus 3 Lv~eg~lvel~--~~~rK~R~~FLFnDlLvc~~ik~~~~~k~~kY~~~w~IPL~dl~-~~~~~--------~~~~~~~~K 71 (96)
T cd01228 3 LVKDSFLVELV--EGSRKLRHLFLFTDVLLCAKLKKTSRGKHQQYDCKWYIPLADLS-FPSEP--------FRIHNKNGK 71 (96)
T ss_pred ccccceeeeeh--hCCCcceEEEeeccEEEEEEeeeccCccccccceeEEEEhHHhe-ecchh--------hhccccCCc
Confidence 46789998774 34568888999999888876532 11 123455678888743 32221 4443 4679
Q ss_pred EEEEEcCCHHHHHHHHHHHHHH
Q 032301 102 TMYFIADSEKEKEDWINSIGRS 123 (143)
Q Consensus 102 ~~~~~a~s~~e~~~W~~al~~~ 123 (143)
+|.|+|.|..|..+|+.+|+..
T Consensus 72 Sf~~~asS~~Er~eW~~hI~~~ 93 (96)
T cd01228 72 SYTFLLSSDYERSEWRESIQKL 93 (96)
T ss_pred eEEEEecCHHHHHHHHHHHHHH
Confidence 9999999999999999999764
No 75
>KOG1451 consensus Oligophrenin-1 and related Rho GTPase-activating proteins [Signal transduction mechanisms]
Probab=97.68 E-value=0.00018 Score=56.32 Aligned_cols=96 Identities=20% Similarity=0.410 Sum_probs=67.7
Q ss_pred CCCceEEEEEEe--CCCCCCceeEEEEEECCeE-EEE---ecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEe
Q 032301 25 SNPERSGWLTKQ--GEYIKTWRRRWFVLKQGKL-FWF---KESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELST 98 (143)
Q Consensus 25 ~~~~~~G~L~k~--~~~~~~w~~r~~vL~~~~l-~~~---~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~ 98 (143)
....++|||+.+ ......|-+.||+....+- ... ..... .+..+..++.|..|+.-. . +...+++||-|..
T Consensus 263 ~p~t~eGYlY~QEK~~~g~sWvKyYC~Y~retk~~TMvp~~qk~g-~k~g~~~~~~lKsC~RRk-t-dSIdKRFCFDve~ 339 (812)
T KOG1451|consen 263 TPSTKEGYLYMQEKSKIGKSWVKYYCVYSRETKIFTMVPANQKTG-TKMGQTATFKLKSCSRRK-T-DSIDKRFCFDVEV 339 (812)
T ss_pred CCcccceeeeehhhhhccchhhhheeEeecccceEEEeecccCCC-CcCCCcceEEehhhccCc-c-cccccceeeeeee
Confidence 346899999986 3455799999999976532 222 22221 134466777788875432 2 2346789999998
Q ss_pred CC--eEEEEEcCCHHHHHHHHHHHHHH
Q 032301 99 RT--ETMYFIADSEKEKEDWINSIGRS 123 (143)
Q Consensus 99 ~~--~~~~~~a~s~~e~~~W~~al~~~ 123 (143)
.. .++.++|-|+++...|+.|+--+
T Consensus 340 ~erpgviTmQALSE~drrlWmeAMDG~ 366 (812)
T KOG1451|consen 340 EERPGVITMQALSEKDRRLWMEAMDGA 366 (812)
T ss_pred cccCCeeehHhhhhhHHHHHHHHhcCC
Confidence 76 67999999999999999998433
No 76
>KOG1117 consensus Rho- and Arf-GTPase activating protein ARAP3 [Signal transduction mechanisms; Cytoskeleton]
Probab=97.64 E-value=4.5e-05 Score=61.84 Aligned_cols=96 Identities=26% Similarity=0.453 Sum_probs=78.8
Q ss_pred cCCCceEEEEEEeCC-CCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCCeE
Q 032301 24 WSNPERSGWLTKQGE-YIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRTET 102 (143)
Q Consensus 24 ~~~~~~~G~L~k~~~-~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~~~ 102 (143)
...+++.|||.|... ..-.++++|..+.+..+.||.+++ ...+.+.+++...+.|.. .+...|++.+..++
T Consensus 84 isp~~~~gwldk~~pqg~~~~qkr~vkf~~~s~~yf~~~k---~py~k~~i~va~is~v~~-----~gd~kfevitn~r~ 155 (1186)
T KOG1117|consen 84 ISPVIKSGWLDKLSPQGEYPFQKRWVKFDGSSLEYFLSPK---DPYSKGPIPVAAISAVRN-----FGDNKFEVITNQRT 155 (1186)
T ss_pred cCchhhcchhhccCcCcccccCccceecCCCCccccCCCC---CCCCCCceeeehhhhhhh-----ccCceEEEEecceE
Confidence 345889999998754 345689999999999999999987 455677888776655543 34578999999999
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHHhh
Q 032301 103 MYFIADSEKEKEDWINSIGRSIVQH 127 (143)
Q Consensus 103 ~~~~a~s~~e~~~W~~al~~~~~~~ 127 (143)
+.|.+++..+...|+.+++.+....
T Consensus 156 fvfr~e~~~~r~~w~s~l~s~~~~Q 180 (1186)
T KOG1117|consen 156 FVFRQESEGERFIWVSPLQSALKEQ 180 (1186)
T ss_pred EEEecCCcccceeeechhhhcchhh
Confidence 9999999999999999999887754
No 77
>PF15408 PH_7: Pleckstrin homology domain
Probab=97.64 E-value=3.9e-05 Score=45.16 Aligned_cols=90 Identities=14% Similarity=0.306 Sum_probs=58.9
Q ss_pred EEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEe----ecCccc---CCCcceEEEEeCCe-
Q 032301 30 SGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTV----KGAEDV---LNKQYAFELSTRTE- 101 (143)
Q Consensus 30 ~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v----~~~~~~---~~~~~~f~i~~~~~- 101 (143)
+|||+..-. ..-++||.+|++..+.+|.++. ...+.+..|+..... +..+.. .-..++|....+++
T Consensus 1 EGYLY~~E~--~si~rRF~~L~~K~~~~~~~KG----G~~L~sF~L~~s~~s~Pm~~~~~A~~N~Gi~A~G~L~~~~~~~ 74 (104)
T PF15408_consen 1 EGYLYRDED--SSIQRRFVMLRSKQFNMYEDKG----GQYLCSFQLSSSVVSHPMVNFSQAVPNLGINAFGFLMYSPSRR 74 (104)
T ss_pred CCeEEEecc--chHHHHHHhhhhceeEEecccC----CceeeeeehhhhhhhcccccccccCCCCCeeEEEEEEecCCcc
Confidence 588887632 3678999999999999998875 235667777652111 111100 11134666777764
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHHH
Q 032301 102 TMYFIADSEKEKEDWINSIGRSIV 125 (143)
Q Consensus 102 ~~~~~a~s~~e~~~W~~al~~~~~ 125 (143)
..-+.|+|.+.++.|+++++.-..
T Consensus 75 ~~~~FA~S~~~~~~Wi~~mN~~s~ 98 (104)
T PF15408_consen 75 HVQCFASSKKVCQSWIQVMNSPSF 98 (104)
T ss_pred hhhhhhhHHHHHHHHHHHhcChhh
Confidence 455669999999999999965443
No 78
>KOG1117 consensus Rho- and Arf-GTPase activating protein ARAP3 [Signal transduction mechanisms; Cytoskeleton]
Probab=97.63 E-value=0.00025 Score=57.72 Aligned_cols=94 Identities=19% Similarity=0.375 Sum_probs=70.4
Q ss_pred CCceEEEEEEeCC----------CCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCc-cc---CCCc
Q 032301 26 NPERSGWLTKQGE----------YIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAE-DV---LNKQ 91 (143)
Q Consensus 26 ~~~~~G~L~k~~~----------~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~-~~---~~~~ 91 (143)
...++|+|+.... .+-...++||||.|+.|+||.++. ...|.+.|.+.....+...+ +. ..-.
T Consensus 491 s~~~~~fLyc~~sa~~kl~~drr~~Ee~nr~wcVlg~g~ls~fen~~---S~tP~~lI~~~Eivclav~~pd~~pn~~~~ 567 (1186)
T KOG1117|consen 491 STFLCGFLYCAPSAASKLSSDRRLREETNRKWCVLGGGFLSYFENEK---STTPNGLININEIVCLAVHPPDTYPNTGFI 567 (1186)
T ss_pred cccccceeeechhhccCCCChhhhcccCCCceEEcCcchhhhhhhcC---CCCCCceeeccceEEEeecCCCCCCCcCce
Confidence 3455699988621 123568999999999999999987 55699999998744433222 22 2336
Q ss_pred ceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHH
Q 032301 92 YAFELSTRT-ETMYFIADSEKEKEDWINSIGR 122 (143)
Q Consensus 92 ~~f~i~~~~-~~~~~~a~s~~e~~~W~~al~~ 122 (143)
+.|.|..+. +.+.|.+++.+++..|..||-+
T Consensus 568 f~fE~~l~~er~~~fgle~ad~l~~wt~aiaK 599 (1186)
T KOG1117|consen 568 FIFEIYLPGERVFLFGLETADALRKWTEAIAK 599 (1186)
T ss_pred eEEEEeecccceEEeecccHHHHHHHHHHHHH
Confidence 889999876 7788999999999999999843
No 79
>PF15404 PH_4: Pleckstrin homology domain
Probab=97.37 E-value=0.0037 Score=42.61 Aligned_cols=53 Identities=25% Similarity=0.373 Sum_probs=38.6
Q ss_pred eEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCC--------CCCcceEEeCCceEEe
Q 032301 29 RSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTR--------ASKPRGVIPVASCLTV 81 (143)
Q Consensus 29 ~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~--------~~~~~~~i~l~~~~~v 81 (143)
+.|.|+.+.+....|+++++||..+.|..|..-.... ......+|+|.+|.+.
T Consensus 1 ~sG~LY~K~~khs~F~~~~vvL~~G~Li~f~~~~Rs~tG~~~~~~~~~~~~tI~L~dcYvY 61 (185)
T PF15404_consen 1 MSGYLYQKPRKHSTFKKYFVVLIPGFLILFQLFKRSRTGFAKPTVHYEHYLTIPLRDCYVY 61 (185)
T ss_pred CCceeeecCCCCCCceEEEEEEeCCEEEEEEEEeeccCCcccceEEeEeeeeeccCCceEE
Confidence 4699999887778999999999999999998633110 1123357888887654
No 80
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=96.71 E-value=0.0025 Score=50.20 Aligned_cols=98 Identities=17% Similarity=0.397 Sum_probs=66.6
Q ss_pred CceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcc-----cCCCcceEEEEeCCe
Q 032301 27 PERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAED-----VLNKQYAFELSTRTE 101 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~-----~~~~~~~f~i~~~~~ 101 (143)
..++||+..-...-.--++.|--|..+-+..|.+.. ....-..|+|+.+..+..... ....+|+|.|.+..-
T Consensus 413 ~~kEGWmvHyt~~d~lRkrHYWrldsk~itlfqn~s---~~ryYkeIPLsEIl~v~~~~~~~~vp~~~~phcFEI~T~~~ 489 (888)
T KOG4236|consen 413 KLKEGWMVHYTSKDNLRKRHYWRLDSKCITLFQNES---TNRYYKEIPLSEILSVSSNNGFSLVPAGTNPHCFEIRTATT 489 (888)
T ss_pred hhhcceEEEEechhhhhhhhhheeccceeEeeecCC---CceeEEeecHHHhheeeccCCcccCCCCCCCceEEEEeeeE
Confidence 556888865432112235556667778888888876 344567788888777766542 235589999999984
Q ss_pred EEEEEcCC------------HHHHHHHHHHHHHHHHhhC
Q 032301 102 TMYFIADS------------EKEKEDWINSIGRSIVQHS 128 (143)
Q Consensus 102 ~~~~~a~s------------~~e~~~W~~al~~~~~~~~ 128 (143)
.||-.++ ...++.|-.||+.+...-.
T Consensus 490 -vyfVge~p~~~~~~~~g~g~d~a~~w~~ai~~alMpV~ 527 (888)
T KOG4236|consen 490 -VYFVGENPSSTPGGESGVGLDAAQGWETAIQQALMPVT 527 (888)
T ss_pred -EEEecCCCCCCccccccccchhhccCchhhhhcccccc
Confidence 4455555 4558999999998877433
No 81
>PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A.
Probab=96.61 E-value=0.015 Score=37.75 Aligned_cols=95 Identities=18% Similarity=0.265 Sum_probs=42.4
Q ss_pred ceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCC---CCCcceEEeCCceEEeec---C-----------------
Q 032301 28 ERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTR---ASKPRGVIPVASCLTVKG---A----------------- 84 (143)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~---~~~~~~~i~l~~~~~v~~---~----------------- 84 (143)
+++|-|.+++.....|..-.+.|-++.|.+-+.....+ -..-...|+|.-. .++. .
T Consensus 2 i~~G~L~Rk~~~~~~~~di~~~LFDh~Lll~K~k~~~k~e~ykV~r~PIPLeLL-~l~~~~d~~~~~~~~~r~s~s~~~~ 80 (135)
T PF15405_consen 2 IYKGDLKRKGDNSFNWVDIHVYLFDHYLLLTKPKKVNKREQYKVYRRPIPLELL-VLESMDDPPPQRSIAKRPSSSLISS 80 (135)
T ss_dssp ---------------S-EEEEEEESSEEEEEEEEEETTEEEEEESS--EEGGG--EEEE--TTTS---------S-----
T ss_pred ccccccccccccccccceeEEEeeccEEEEEEEEecCCeEEEEEEECCcCHHHe-eeecccCCCcccCcccccccCccCC
Confidence 67899999887767888999999999888877653110 0112223333321 1110 0
Q ss_pred ------------cccCCCcceEEEEeCC---eEEEEEcCCHHHHHHHHHHHHHH
Q 032301 85 ------------EDVLNKQYAFELSTRT---ETMYFIADSEKEKEDWINSIGRS 123 (143)
Q Consensus 85 ------------~~~~~~~~~f~i~~~~---~~~~~~a~s~~e~~~W~~al~~~ 123 (143)
....+..+.|.+.+-+ ..+.|+|+|..+.++|+.+|..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~yp~~~~hlG~~~~~~TLyA~s~~~R~~W~e~I~~q 134 (135)
T PF15405_consen 81 SSSNSNSPSNPNSSDSKSLYPFTFRHLGRKGYSYTLYASSAQARQKWLEKIEEQ 134 (135)
T ss_dssp --SHHHH--------TSSEEEEEE---GGG-EEEEEE-SSHHHHHHHHHHHHHH
T ss_pred ccCCCCccceeeeccCCCccCEEEEEcCCCceEEEEEeCCHHHHHHHHHHHHhc
Confidence 0011223455555543 35799999999999999999764
No 82
>KOG4807 consensus F-actin binding protein, regulates actin cytoskeletal organization [Cytoskeleton]
Probab=96.59 E-value=7.1e-06 Score=61.07 Aligned_cols=83 Identities=24% Similarity=0.615 Sum_probs=67.0
Q ss_pred CCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCCeEEEEEcCCHHHHHHHHHHH
Q 032301 41 KTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRTETMYFIADSEKEKEDWINSI 120 (143)
Q Consensus 41 ~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~~~~~~~a~s~~e~~~W~~al 120 (143)
..|++.|||+++..+.||.+.....-....+.++|..|+.+.... ..+.|.|+|.+.+..+.+.+.+..-...|+.|+
T Consensus 33 ~~~~k~~~~~~~~~~~~~~d~~A~~~~~L~~~~~LR~C~~v~e~a--~q~nY~~~i~~~~~~~tL~~~~s~Ir~~~~~A~ 110 (593)
T KOG4807|consen 33 SQWKKHWFVLTDSSLKYYRDSTAEEADELDGEIDLRSCTDVTEYA--VQRNYGFQIHTKDAVYTLSAMTSGIRRNWIEAL 110 (593)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhcccCCccccHHHHHHHHHHH--HHhccceeecccchhhhhHHHHHHHHHHHHHHH
Confidence 479999999999999999887643334456888999987664332 356799999999999999999999999999999
Q ss_pred HHHHH
Q 032301 121 GRSIV 125 (143)
Q Consensus 121 ~~~~~ 125 (143)
+..+.
T Consensus 111 ~kT~~ 115 (593)
T KOG4807|consen 111 RKTVR 115 (593)
T ss_pred HhccC
Confidence 85543
No 83
>KOG3727 consensus Mitogen inducible gene product (contains ERM and PH domains) [Cell cycle control, cell division, chromosome partitioning]
Probab=96.42 E-value=0.00038 Score=54.17 Aligned_cols=87 Identities=16% Similarity=0.261 Sum_probs=58.3
Q ss_pred CCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeC---CeEEEEEcCCHHHHHHH
Q 032301 40 IKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTR---TETMYFIADSEKEKEDW 116 (143)
Q Consensus 40 ~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~---~~~~~~~a~s~~e~~~W 116 (143)
++.+++.||...+-.+.+|++.... ..+|...|++.+|.+.+..+....+-+.|.|... +..+|+.|+++++...|
T Consensus 372 ~Kg~kr~f~t~~dl~~~~~~s~~~s-~~ap~~~i~l~gcev~~dV~~~~~k~~i~l~~~~~~~msEi~LRCd~E~QYA~W 450 (664)
T KOG3727|consen 372 LKGYKRYFFTFRDLHLSLYKSSEDS-RGAPAISINLKGCEVTPDVNLSQQKYAIKLLVPTAEGMSEIWLRCDNEQQYARW 450 (664)
T ss_pred hhhhhhHHHHHHHHHHHHHhhHhhh-cCCCCCchhhcCcccCCccccccccceEEEEeecCCccceeEEecCCHHHHHHH
Confidence 3456666666555444444443322 2568888999988776655554444455555542 36799999999999999
Q ss_pred HHHHHHHHHhh
Q 032301 117 INSIGRSIVQH 127 (143)
Q Consensus 117 ~~al~~~~~~~ 127 (143)
+.|.+.|....
T Consensus 451 MAaCrLASKGk 461 (664)
T KOG3727|consen 451 MAACRLASKGK 461 (664)
T ss_pred HHHhhHhhcCC
Confidence 99998887643
No 84
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=96.34 E-value=0.0038 Score=46.91 Aligned_cols=101 Identities=24% Similarity=0.434 Sum_probs=70.3
Q ss_pred CCceEEEEEEe--CCCCCCceeEEEEEECCeEEEEecCCCC--CCCCcceEEeCCceEEeecCccc----CCCcceEEEE
Q 032301 26 NPERSGWLTKQ--GEYIKTWRRRWFVLKQGKLFWFKESTVT--RASKPRGVIPVASCLTVKGAEDV----LNKQYAFELS 97 (143)
Q Consensus 26 ~~~~~G~L~k~--~~~~~~w~~r~~vL~~~~l~~~~~~~~~--~~~~~~~~i~l~~~~~v~~~~~~----~~~~~~f~i~ 97 (143)
++.+-|||.++ ++....|++.+++|+...+.+|.+-... ....|..+.+|---..|-..+.. .+....|.+.
T Consensus 291 evkHiGWLaeq~~~~G~~~w~P~l~~lTekelliYes~P~~keaws~P~~~ypLvaTRLvhsg~~~~s~~~g~~lsFa~R 370 (506)
T KOG3551|consen 291 EVKHIGWLAEQVSGGGISQWKPKLMALTEKELLIYESMPWTKEAWSRPRHTYPLVATRLVHSGSGKGSVIKGLTLSFATR 370 (506)
T ss_pred chhhhhhHHhhccCCChhhhhhheeeechhhhhhhhcChhhHHHhcChhhhhhhhhhhheecCCCCCCCcCCceEEEEEe
Confidence 67889999887 3455789999999999999999876532 13457777776542222211111 1123578887
Q ss_pred eCC----eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 032301 98 TRT----ETMYFIADSEKEKEDWINSIGRSIVQ 126 (143)
Q Consensus 98 ~~~----~~~~~~a~s~~e~~~W~~al~~~~~~ 126 (143)
+.. +++.|..++..|+..|...|-.-...
T Consensus 371 tGTrqGV~thlfrvEThrdLa~WtRslVqGch~ 403 (506)
T KOG3551|consen 371 TGTRQGVETHLFRVETHRELAAWTRSLVQGCHE 403 (506)
T ss_pred cccccceEEEEEEeccHHHHHHHHHHHHHHHHH
Confidence 764 67999999999999999988665543
No 85
>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.30 E-value=0.15 Score=33.01 Aligned_cols=83 Identities=14% Similarity=0.275 Sum_probs=54.1
Q ss_pred CceeEEEEEECCeEEEEecCCCCCC--CCc----ceEEeCCceEEeecCcccCCCcceEEEEeCC--eEEEEEcCCHHHH
Q 032301 42 TWRRRWFVLKQGKLFWFKESTVTRA--SKP----RGVIPVASCLTVKGAEDVLNKQYAFELSTRT--ETMYFIADSEKEK 113 (143)
Q Consensus 42 ~w~~r~~vL~~~~l~~~~~~~~~~~--~~~----~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~--~~~~~~a~s~~e~ 113 (143)
.-+.|++.|-...+.+.+....... ..| ...|.++.. .+.... .+.+..|.|-... ..|.++|.|.+..
T Consensus 28 K~~eRhVFLFE~~viF~K~~~~~~~~~~~p~Y~yK~~ikls~l-glte~v--~gd~~kFeiw~~~~~~~yilqA~t~e~K 104 (133)
T cd01227 28 KPMQRHIFLHEKAVLFCKKREENGEGEKAPSYSFKQSLKMTAV-GITENV--KGDTKKFEIWYNAREEVYILQAPTPEIK 104 (133)
T ss_pred CCceeEEEEecceEEEEEEeccCCCCCcceeEEEeeeEEeecc-cccccC--CCCccEEEEEeCCCCcEEEEEcCCHHHH
Confidence 3467889999988888876542111 112 233444432 222211 2336677777654 6799999999999
Q ss_pred HHHHHHHHHHHHhh
Q 032301 114 EDWINSIGRSIVQH 127 (143)
Q Consensus 114 ~~W~~al~~~~~~~ 127 (143)
..|+..|+..+...
T Consensus 105 ~~Wv~~I~~iL~~Q 118 (133)
T cd01227 105 AAWVNEIRKVLTSQ 118 (133)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999887754
No 86
>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain. Phospholipase C (PLC) pleckstrin homology (PH) domain. There are several isozymes of PLC (beta, gamma, delta, epsilon. zeta). While, PLC beta, gamma and delta all have N-terminal PH domains, lipid binding specificity is not conserved between them. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.20 E-value=0.1 Score=32.75 Aligned_cols=74 Identities=24% Similarity=0.487 Sum_probs=45.9
Q ss_pred eeEEEEEEC--CeEEEEecCCCCCCCCcceEEeCCceEEeecCccc-------------CCCcceEEEEeCC----eEEE
Q 032301 44 RRRWFVLKQ--GKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDV-------------LNKQYAFELSTRT----ETMY 104 (143)
Q Consensus 44 ~~r~~vL~~--~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~-------------~~~~~~f~i~~~~----~~~~ 104 (143)
+++.|.|.. ..++|..... .....++|..+..+...... .....+|.|.... +.+.
T Consensus 22 ~~~~f~ld~~~~~l~W~~~~~-----~~~~~l~i~~IkeIR~G~~~k~~~~~~~~~~~~~~e~~~fTIiy~~~~~~k~L~ 96 (115)
T cd01248 22 RRRLFRLDEKGFFLYWKDEGK-----KEKKVLDISSIKEIRTGKQPKDLKLRAELNQGNSLEERCFTIVYGTDLNLKSLD 96 (115)
T ss_pred eeEEEEEcCCCcEEEEeCCCC-----ccccEEEehhhhhhhCCCCCcchHHhhhhhcCCCccccEEEEEECCCCCeeEEE
Confidence 567777753 4444443221 13455666654444322100 1335789988765 4799
Q ss_pred EEcCCHHHHHHHHHHHHH
Q 032301 105 FIADSEKEKEDWINSIGR 122 (143)
Q Consensus 105 ~~a~s~~e~~~W~~al~~ 122 (143)
|-|+|.++++.|+..|+.
T Consensus 97 lVA~s~~~a~~W~~gL~~ 114 (115)
T cd01248 97 LVAPSEEEAKTWVSGLRK 114 (115)
T ss_pred EEECCHHHHHHHHHHHhh
Confidence 999999999999999863
No 87
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=96.19 E-value=0.0023 Score=50.26 Aligned_cols=36 Identities=28% Similarity=0.541 Sum_probs=30.8
Q ss_pred ceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 032301 92 YAFELSTRT-ETMYFIADSEKEKEDWINSIGRSIVQH 127 (143)
Q Consensus 92 ~~f~i~~~~-~~~~~~a~s~~e~~~W~~al~~~~~~~ 127 (143)
.+|.|+... .++.|.|.+.+|...|+.||+..|.+.
T Consensus 446 e~F~IVs~tgqtWhFeAtt~EERdaWvQai~sqIlaS 482 (749)
T KOG0705|consen 446 ECFEIVSNTGQTWHFEATTYEERDAWVQAIQSQILAS 482 (749)
T ss_pred ceEEEeccccchhhhhhcchhhHHHHHHHHHHHHHHH
Confidence 378888754 778999999999999999999887765
No 88
>PF15411 PH_10: Pleckstrin homology domain
Probab=96.13 E-value=0.17 Score=31.99 Aligned_cols=92 Identities=20% Similarity=0.239 Sum_probs=60.2
Q ss_pred CCCceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCCC----------CCcc------eEEeCCceEEeecCcccC
Q 032301 25 SNPERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRA----------SKPR------GVIPVASCLTVKGAEDVL 88 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~----------~~~~------~~i~l~~~~~v~~~~~~~ 88 (143)
+...+-|-+..... ..|+..++.|....|.+++....... .... |.|-+...+.+...+ .
T Consensus 5 G~Lll~g~~~V~k~--~~erE~~vYLFe~illc~kE~~~~~~~~~~~~~~~~~~~~~~L~LKGrI~i~~i~~v~~~s--~ 80 (116)
T PF15411_consen 5 GELLLHGTLTVGKD--DSEREYEVYLFEKILLCCKEVKPKKKKSKQISSKKKKKKKTKLQLKGRIYISNITEVSSSS--K 80 (116)
T ss_pred cceEEccEEEEEeC--CcceeeeeeeeeeeEEEEecCccCccchhhcccccccCCCceEEEeeEEEEEeeeeeeccC--C
Confidence 34456666665543 57999999999998888886653211 1122 334444433333332 2
Q ss_pred CCcceEEEEeC----CeEEEEEcCCHHHHHHHHHHH
Q 032301 89 NKQYAFELSTR----TETMYFIADSEKEKEDWINSI 120 (143)
Q Consensus 89 ~~~~~f~i~~~----~~~~~~~a~s~~e~~~W~~al 120 (143)
...+.++|.-. ...+.+...+++.++.|..+|
T Consensus 81 ~g~~~L~i~w~~d~e~~~F~lrf~nee~l~~W~~~L 116 (116)
T PF15411_consen 81 PGSYSLQISWKGDPELENFTLRFRNEEQLEQWRSAL 116 (116)
T ss_pred CCceEEEEEEcCCCCCceEEEEeCCHHHHHHHHhhC
Confidence 45688888862 267999999999999999875
No 89
>KOG2070 consensus Guanine nucleotide exchange factor [Nucleotide transport and metabolism]
Probab=95.63 E-value=0.038 Score=42.96 Aligned_cols=98 Identities=20% Similarity=0.294 Sum_probs=67.8
Q ss_pred ccCCCceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCC-e
Q 032301 23 FWSNPERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRT-E 101 (143)
Q Consensus 23 ~~~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~-~ 101 (143)
..+++++.|....+-+. ..=+.||++|..+.|.++.-...-..-...+-+++.|. +|...++.....+.|.|.... .
T Consensus 306 ~lG~iiymg~v~Vqy~~-ad~~dRy~~LF~~~llflsvs~rMs~fIyegKlp~tG~-iV~klEdte~~~nafeis~~ti~ 383 (661)
T KOG2070|consen 306 TLGNIIYMGQVLVQYAG-ADEKDRYLLLFPNVLLFLSVSPRMSGFIYEGKLPTTGM-IVTKLEDTENHRNAFEISGSTIE 383 (661)
T ss_pred hccceEeeeehhhhhcC-cchhhheeeeccceeeeeEeccccchhhhcccccccee-EEeehhhhhcccccccccccchh
Confidence 34567777776654211 12358999999998877754432112224467788885 566666666778889988776 5
Q ss_pred EEEEEcCCHHHHHHHHHHHHH
Q 032301 102 TMYFIADSEKEKEDWINSIGR 122 (143)
Q Consensus 102 ~~~~~a~s~~e~~~W~~al~~ 122 (143)
.+...|.++.++++|+.+++.
T Consensus 384 rIv~~c~~~~~l~~wve~ln~ 404 (661)
T KOG2070|consen 384 RIVVSCNNQQDLQEWVEHLNK 404 (661)
T ss_pred heeeccCChHHHHHHHHHhhh
Confidence 577889999999999999985
No 90
>KOG3531 consensus Rho guanine nucleotide exchange factor CDEP [Signal transduction mechanisms]
Probab=94.92 E-value=0.025 Score=46.45 Aligned_cols=101 Identities=23% Similarity=0.373 Sum_probs=69.4
Q ss_pred CCceEEEEEEeCCCCCCceeEEEEEECCeEEEEecC-CCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCCeEEE
Q 032301 26 NPERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKES-TVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRTETMY 104 (143)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~-~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~~~~~ 104 (143)
..+..|-|.|..+ +.-++|-|.|-.+.+.|-... ...+.-...+.+++. ..++..+....-+|+|.|....+.++
T Consensus 749 E~ir~g~llK~sk--kgLqqrmfFLfsdillytsk~~~~~~~fri~g~lP~~--l~~en~en~~s~p~~~ti~~~qk~i~ 824 (1036)
T KOG3531|consen 749 EFIRSGCLLKLSK--KGLQQRMFFLFSDILLYTSKGPDVQKCFRINGDLPLT--LTMENSENEWSVPHCFTISGAQKQIY 824 (1036)
T ss_pred hhhhcCCchhhcc--ccchhhhhhhhhhhheeccCCCChhheeEeccCCceE--eeeecccccccCCceEEEeccceEEE
Confidence 4577888887642 355777777776666665443 222122334555555 23444444556799999999999999
Q ss_pred EEcCCHHHHHHHHHHHHHHHHhhCCC
Q 032301 105 FIADSEKEKEDWINSIGRSIVQHSRS 130 (143)
Q Consensus 105 ~~a~s~~e~~~W~~al~~~~~~~~~~ 130 (143)
..|.+..+.+.|..-++.++....+.
T Consensus 825 vsast~~~sk~~~~~r~~~i~~~~k~ 850 (1036)
T KOG3531|consen 825 VSASTRRESKKWEFDRRKAIDLAPKK 850 (1036)
T ss_pred Eeccchhhhhhhhhccchhhhhcccc
Confidence 99999999999999988888755543
No 91
>KOG1738 consensus Membrane-associated guanylate kinase-interacting protein/connector enhancer of KSR-like [Nucleotide transport and metabolism]
Probab=94.85 E-value=0.0029 Score=50.00 Aligned_cols=50 Identities=26% Similarity=0.585 Sum_probs=40.3
Q ss_pred CceEEEEEEeCC---CCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceE
Q 032301 27 PERSGWLTKQGE---YIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCL 79 (143)
Q Consensus 27 ~~~~G~L~k~~~---~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~ 79 (143)
...+||+++.+. ....|++.||||.++.|+.|.+.+ ...+..+|.|...+
T Consensus 562 G~~qg~~~r~k~~~~~~~kW~k~~~~l~~~~l~~y~n~~---~~~~e~~i~l~~~~ 614 (638)
T KOG1738|consen 562 GDRQGWLTRLKLNHLTQEKWRKIWMVLNDDPLLNYRNHR---VRAAESVIKLPLFT 614 (638)
T ss_pred chhhccchhhccchHHHHHhhhheeeecCchhhhhhhhh---hhchhheeeccchh
Confidence 456788887643 235799999999999999999998 56788999998864
No 92
>cd01255 PH_TIAM TIAM Pleckstrin homology (PH) domain. TIAM Pleckstrin homology (PH) domain. TIAM (T-cell invasion and metastasis) is a guanine nucleotide exchange factor specific for RAC1. It consists of an N-terminal PH domain followed by Raf-like ras binding domain(RDB), a PDZ domain, a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. This subfamily contains the alignment of the PH domain that follows the DH domain.
Probab=94.79 E-value=0.68 Score=30.26 Aligned_cols=84 Identities=15% Similarity=0.319 Sum_probs=52.5
Q ss_pred eEEEEEECCeEEEEecCCCCCCC-------------Cc---ceEEeCCceEEeecCcccCCCcceEEEEe--------CC
Q 032301 45 RRWFVLKQGKLFWFKESTVTRAS-------------KP---RGVIPVASCLTVKGAEDVLNKQYAFELST--------RT 100 (143)
Q Consensus 45 ~r~~vL~~~~l~~~~~~~~~~~~-------------~~---~~~i~l~~~~~v~~~~~~~~~~~~f~i~~--------~~ 100 (143)
---||++...+..|+.....+.. +| ...|++....+-..+.......+.+.|.+ |.
T Consensus 51 ~~~FVFK~AVVlv~ke~~K~KkKl~~~~r~~~~~e~dp~rfr~miP~~alQVR~~n~ad~e~~~vwEliH~kSe~egRpE 130 (160)
T cd01255 51 LMCFVFKSAVVLVYKERLKQKKKLMGVSRKNATNEVDPFRFRVLIPVTALQVRASSAADMESNFLWELIHLKSELEGRPE 130 (160)
T ss_pred EEEEEecceEEEEEcCcchhhhccccccccccccccCceeEEEeeceeeeeeecCCCcCcccceEEEEEeecccccCCCc
Confidence 34578888888888765521111 11 11444444322222222234567888875 34
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHHHhhC
Q 032301 101 ETMYFIADSEKEKEDWINSIGRSIVQHS 128 (143)
Q Consensus 101 ~~~~~~a~s~~e~~~W~~al~~~~~~~~ 128 (143)
++|.|+|.+.+-.+..+..|+..+....
T Consensus 131 ~vfqLCcS~~E~k~~flK~Irsilre~~ 158 (160)
T cd01255 131 KVFVLCCSTAESRNAFLKTIRSILRESV 158 (160)
T ss_pred ceEEEecCCHHHHHHHHHHHHHHHHHHh
Confidence 6799999999999999999998887543
No 93
>KOG4407 consensus Predicted Rho GTPase-activating protein [General function prediction only]
Probab=94.79 E-value=0.001 Score=56.47 Aligned_cols=102 Identities=20% Similarity=0.282 Sum_probs=74.0
Q ss_pred ccCCCceEEEEEEe----------CCCCCCceeEEEEEECCeEEEEecCCCCC-----------CCCcceEEeCCceEEe
Q 032301 23 FWSNPERSGWLTKQ----------GEYIKTWRRRWFVLKQGKLFWFKESTVTR-----------ASKPRGVIPVASCLTV 81 (143)
Q Consensus 23 ~~~~~~~~G~L~k~----------~~~~~~w~~r~~vL~~~~l~~~~~~~~~~-----------~~~~~~~i~l~~~~~v 81 (143)
.+.+..++|||+.+ |..+..|+..|.+|.++.++.+++..... ....-..+.++.|.+.
T Consensus 919 ~Fsd~~megWly~~q~~SkkGk~tGssLr~wk~~y~~l~ghsl~L~ss~re~~~~~aas~as~~~st~tts~c~nscltd 998 (1973)
T KOG4407|consen 919 LFSDSEMEGWLYVLQSSSKKGKATGSSLREWKLSYTGLHGHSLVLNSSAREHNSQSAASLASSSCSTATTSECLNSCLTD 998 (1973)
T ss_pred hhhhhhhhcceeeeeecccCCcccCcchhhhhhHHHHhccccceecccccccCcchhhhhcccccccccCccccccchhh
Confidence 34678899999875 12456899999999999999998776210 1122334566666543
Q ss_pred ecCcccCCCcceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHH
Q 032301 82 KGAEDVLNKQYAFELSTRT-ETMYFIADSEKEKEDWINSIGRSIV 125 (143)
Q Consensus 82 ~~~~~~~~~~~~f~i~~~~-~~~~~~a~s~~e~~~W~~al~~~~~ 125 (143)
.... ..++.+.|++.+.+ ....|++++.++|-.|+...+....
T Consensus 999 I~ys-etkrn~vfRLTt~d~ce~lfqaeDrddmlgG~~ttq~St~ 1042 (1973)
T KOG4407|consen 999 IQYS-ETKRNQVFRLTTNDLCEGLFQAEDRDDMLGGLSTTQSSTT 1042 (1973)
T ss_pred hhhh-hhhhhhHHHhHHHHHHhHhhccCccccccchhhhhhhccc
Confidence 3222 24778999999988 7789999999999999998865544
No 94
>KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms]
Probab=94.70 E-value=0.04 Score=43.48 Aligned_cols=87 Identities=14% Similarity=0.120 Sum_probs=65.2
Q ss_pred CCCCceeEEEEEE---CCeEEEEecCCCCCCCCcceEEeCCceEEeecCcc-cCCCcceEEEEeCCeEEEEEcCCHHHHH
Q 032301 39 YIKTWRRRWFVLK---QGKLFWFKESTVTRASKPRGVIPVASCLTVKGAED-VLNKQYAFELSTRTETMYFIADSEKEKE 114 (143)
Q Consensus 39 ~~~~w~~r~~vL~---~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~-~~~~~~~f~i~~~~~~~~~~a~s~~e~~ 114 (143)
....|...|+++- ...++.|..++ +......|+|.+|.+..+... .....++|.+.-....++|.++|++-.+
T Consensus 509 ~~~~g~~a~~~vP~~d~~~~~~Yg~~q---Dv~a~~~iPl~~~~v~~pe~~~~~D~~~~~k~~~s~~~~~~~a~~~q~qq 585 (623)
T KOG4424|consen 509 AGKTGILAWSVVPKSDPLVDYSYGSPQ---DVRAQATIPLPGVEVTIPEFVRREDLFHVFKLVQSHLSWHLAADDEQLQQ 585 (623)
T ss_pred cCccceeeeeeccCCCCccccccCCcc---ccccccccccCccccCCCcccccchhcchhhhhhhcceeeeccCCHHHHH
Confidence 3468999998874 44677777777 566788999999754432221 1233678888877889999999999999
Q ss_pred HHHHHHHHHHHhhC
Q 032301 115 DWINSIGRSIVQHS 128 (143)
Q Consensus 115 ~W~~al~~~~~~~~ 128 (143)
.|+..|..|+....
T Consensus 586 ~wl~~l~~A~~~d~ 599 (623)
T KOG4424|consen 586 RWLEVLLLAVSGDL 599 (623)
T ss_pred HHHHHHHhhhcccc
Confidence 99999999987543
No 95
>KOG3523 consensus Putative guanine nucleotide exchange factor TIM [Signal transduction mechanisms]
Probab=94.66 E-value=0.094 Score=41.78 Aligned_cols=80 Identities=16% Similarity=0.303 Sum_probs=51.7
Q ss_pred CceeEEEEEECCeEEEEecCCCCC----CCCcceEEeCCceEEeecCc----ccCCCcceEEEEeC----C--eEEEEEc
Q 032301 42 TWRRRWFVLKQGKLFWFKESTVTR----ASKPRGVIPVASCLTVKGAE----DVLNKQYAFELSTR----T--ETMYFIA 107 (143)
Q Consensus 42 ~w~~r~~vL~~~~l~~~~~~~~~~----~~~~~~~i~l~~~~~v~~~~----~~~~~~~~f~i~~~----~--~~~~~~a 107 (143)
..+..|+.|..+.|.+.+...... +.++...+.+..|..-...+ .....+|.|.+.-- + ..++|.|
T Consensus 498 ~~~~vylfLFnD~Llitk~k~~~~f~V~Dya~r~~l~ve~~e~~~~lp~~~~~~~~~~hlF~ltLl~N~~~~~~e~lL~a 577 (695)
T KOG3523|consen 498 LSKTVYLFLFNDLLLITKKKSEGSFQVFDYAPRSLLQVEKCEPELKLPGGANSLSSRPHLFLLTLLSNHQGRQTELLLSA 577 (695)
T ss_pred ccceeeeeeecceeeEeeecCCCceEEeeccchhhhhhhhcCcccCCCCCCcccccccceEEEehhhccCCCceeeeecC
Confidence 456888899999998887766211 22345555555543211111 11234688888742 2 4589999
Q ss_pred CCHHHHHHHHHHHH
Q 032301 108 DSEKEKEDWINSIG 121 (143)
Q Consensus 108 ~s~~e~~~W~~al~ 121 (143)
+|+.|+++|+.||.
T Consensus 578 ~s~Sd~~RWi~Al~ 591 (695)
T KOG3523|consen 578 ESQSDRQRWISALR 591 (695)
T ss_pred CchHHHHHHHHhcC
Confidence 99999999999984
No 96
>KOG1737 consensus Oxysterol-binding protein [Lipid transport and metabolism]
Probab=94.64 E-value=0.025 Score=46.55 Aligned_cols=90 Identities=17% Similarity=0.327 Sum_probs=60.7
Q ss_pred CceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeC-CeEEEE
Q 032301 27 PERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTR-TETMYF 105 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~-~~~~~~ 105 (143)
.-.+|||.+-....+.|.+|||++.++.+.||...... ...+.+.+.+... .+.. .....+.+... ...++.
T Consensus 77 ~~~~g~l~k~~n~~~~~~~r~f~l~~g~ls~~~~~~~~-~~~~~~~~~~~~a-~i~~-----~~~~~~~~~~~~~q~~~~ 149 (799)
T KOG1737|consen 77 ASLEGILLKWRNYSKGPSSRWFVLSGGLLSYYFDNSFS-KTTCGGGINLVTA-WIQN-----GERMDICSVDGSCQIYLV 149 (799)
T ss_pred ccccceeeccccccCCcccceEEecCcceeeeccCCcc-ccCCCCccccccc-cccc-----CCCcccchhhcccchhhh
Confidence 34679999987788899999999999999999877632 3345556655442 1111 11122222222 355677
Q ss_pred EcCCHHHHHHHHHHHHHH
Q 032301 106 IADSEKEKEDWINSIGRS 123 (143)
Q Consensus 106 ~a~s~~e~~~W~~al~~~ 123 (143)
.+.+..+...|+.+++.+
T Consensus 150 ~~~~~~~~~~~~~~~~l~ 167 (799)
T KOG1737|consen 150 ELSKKLQRQGWLHALELA 167 (799)
T ss_pred hhhHHHhhcchhhhhhhc
Confidence 788889999999999877
No 97
>PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function.
Probab=94.47 E-value=0.18 Score=31.40 Aligned_cols=39 Identities=26% Similarity=0.441 Sum_probs=34.7
Q ss_pred CCcceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 032301 89 NKQYAFELSTRTETMYFIADSEKEKEDWINSIGRSIVQH 127 (143)
Q Consensus 89 ~~~~~f~i~~~~~~~~~~a~s~~e~~~W~~al~~~~~~~ 127 (143)
...+.|-|.|..+.+-|.|+|..+.+.|++.|+..+...
T Consensus 68 ~~~~yfgL~T~~G~vEfec~~~~~~k~W~~gI~~mL~~~ 106 (110)
T PF08458_consen 68 EERRYFGLKTAQGVVEFECDSQREYKRWVQGIQHMLSQV 106 (110)
T ss_pred ceEEEEEEEecCcEEEEEeCChhhHHHHHHHHHHHHHHh
Confidence 356889999999999999999999999999999887653
No 98
>KOG0248 consensus Cytoplasmic protein Max-1, contains PH, MyTH4 and FERM domains [Cytoskeleton]
Probab=93.22 E-value=0.038 Score=44.57 Aligned_cols=92 Identities=8% Similarity=-0.193 Sum_probs=66.7
Q ss_pred CCceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCCeEEEE
Q 032301 26 NPERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRTETMYF 105 (143)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~~~~~~ 105 (143)
...+.|+|.++....+.|+.+||++.++.+.+|+++.+ .+.+.+.+.+-...... -....-++.+..+++++
T Consensus 258 ~~s~~k~lkrr~~v~k~gqi~~y~~~~~~~~~p~s~~d----~~s~~~~~~~~~s~~fq----li~~t~~~~~~~~s~~l 329 (936)
T KOG0248|consen 258 LTSRIKSLKRRYVVFKNGQISFYRKHNNRDEEPASKID----IRSVTKLEQQGAAYAFQ----LITSTDKMNFMTESERT 329 (936)
T ss_pred chHHHHHHHhHheeeccceEEEEEcCCCccccccCccc----ccccceeeccchhHHhh----hhhhceeEEEeccChhh
Confidence 35667888888777899999999999999999998863 35566656542122221 11234455666678889
Q ss_pred EcCCHHHHHHHHHHHHHHHH
Q 032301 106 IADSEKEKEDWINSIGRSIV 125 (143)
Q Consensus 106 ~a~s~~e~~~W~~al~~~~~ 125 (143)
.++...-+++|+.++.....
T Consensus 330 t~dw~~iL~~~iKv~~~~~~ 349 (936)
T KOG0248|consen 330 THDWVTILSAAIKATTLREM 349 (936)
T ss_pred hhhhHHHHHHHHHHHhccch
Confidence 99999999999999986644
No 99
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=92.35 E-value=0.32 Score=40.43 Aligned_cols=59 Identities=25% Similarity=0.391 Sum_probs=43.3
Q ss_pred cceEEeCCceEEeecCcccCCCcceEEEEeCC---eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 032301 69 PRGVIPVASCLTVKGAEDVLNKQYAFELSTRT---ETMYFIADSEKEKEDWINSIGRSIVQH 127 (143)
Q Consensus 69 ~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~---~~~~~~a~s~~e~~~W~~al~~~~~~~ 127 (143)
..++.+++.+.++........+.+.|.|.... ..+.|.|++.+++.+|+.+|+++....
T Consensus 852 ~rgi~d~~~~nvv~~~q~~n~~~~vf~l~~~~~~~~~~~~aadsqEe~~eW~k~i~E~t~~a 913 (1267)
T KOG1264|consen 852 CRGILDLNTYNVVKAPQGKNQKSFVFILEPKWQGKPPVEFAADSQEELFEWFKSIREITWKA 913 (1267)
T ss_pred hhccccccccceeecccccCCcceEEEechhhhcCCceEEecCchHHHHHHHHHHHHHHHHh
Confidence 34566677666665555545567788887543 668999999999999999999887643
No 100
>KOG4047 consensus Docking protein 1 (p62dok) [Signal transduction mechanisms]
Probab=90.59 E-value=0.19 Score=38.76 Aligned_cols=101 Identities=12% Similarity=0.069 Sum_probs=60.1
Q ss_pred CCceEEEEEEeCCC--CCCceeEEEEEECCe------EEEEecCCCCC----CCCcceEEeCCceEEeecCcccCCCcce
Q 032301 26 NPERSGWLTKQGEY--IKTWRRRWFVLKQGK------LFWFKESTVTR----ASKPRGVIPVASCLTVKGAEDVLNKQYA 93 (143)
Q Consensus 26 ~~~~~G~L~k~~~~--~~~w~~r~~vL~~~~------l~~~~~~~~~~----~~~~~~~i~l~~~~~v~~~~~~~~~~~~ 93 (143)
..++.|++...... .+.|.+.|++|.... +..|....... ..-...++.++.|..++........+-.
T Consensus 7 ~~~k~g~~~~~~~r~~~k~~~~~~~~L~~gs~~g~aRle~~~~~g~~~~~~~~~~~rR~~~ls~~~S~e~~~~~~~~~~i 86 (429)
T KOG4047|consen 7 CLVKDGVPDNHRNKFKVKNVRDDGAELGSGSMELTARLEILESRGRESVRWPYRCLRRYGYLSNLFSFESGRRCQTGPGI 86 (429)
T ss_pred cccccCccchhhhhhccccccccceeeeccccccchhhhhhhccCCcccccchhcceeeEeeccceeeecccccccCCCc
Confidence 46788888766443 358999999997553 33333222110 1112367778888777766543333333
Q ss_pred EEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 032301 94 FELSTRTETMYFIADSEKEKEDWINSIGRSIVQ 126 (143)
Q Consensus 94 f~i~~~~~~~~~~a~s~~e~~~W~~al~~~~~~ 126 (143)
+......-.-+|-|.+.-+...|+++|..-...
T Consensus 87 ~~~f~~~a~e~~~~~q~l~~~~w~~~i~~~~~~ 119 (429)
T KOG4047|consen 87 TAFFCDRAEELFNMLQDLMQANWINAIEEPAIP 119 (429)
T ss_pred eEEEecchHHHHHHHHHHHhhhhhhhhhhcccc
Confidence 333322211167788888888899999877664
No 101
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=90.58 E-value=0.41 Score=36.41 Aligned_cols=39 Identities=15% Similarity=0.353 Sum_probs=32.5
Q ss_pred CCcceEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 032301 89 NKQYAFELSTRT--ETMYFIADSEKEKEDWINSIGRSIVQH 127 (143)
Q Consensus 89 ~~~~~f~i~~~~--~~~~~~a~s~~e~~~W~~al~~~~~~~ 127 (143)
....+|.|..++ .+.++.|.|..++..|..||+.++...
T Consensus 234 pEnR~lEihSpdg~~tliLR~kdsa~A~~Wf~AiHa~v~~l 274 (506)
T KOG3551|consen 234 PENRQLEIHSPDGRHTLILRAKDSAEADSWFEAIHANVNTL 274 (506)
T ss_pred cccceeeeeCCCCcceEEEEccCcHHHHHHHHHHHHHHhhH
Confidence 345678898887 678899999999999999999887643
No 102
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=90.54 E-value=1.5 Score=35.01 Aligned_cols=89 Identities=21% Similarity=0.300 Sum_probs=57.3
Q ss_pred ceEEEEEEeCCCCCCceeEEEEEEC-CeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCCeEEEEE
Q 032301 28 ERSGWLTKQGEYIKTWRRRWFVLKQ-GKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRTETMYFI 106 (143)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~r~~vL~~-~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~~~~~~~ 106 (143)
.++|.|.++.+. .-++|.+.|+. ..+.|+... .....+.|++..+..++. ...+.|-|.+|+++|+|.
T Consensus 452 ~k~~~l~k~~~l--f~rkr~lllTn~~rll~~~~~----~~~lk~eip~~~~~~~e~-----~n~~~~~i~TP~k~~~l~ 520 (604)
T KOG0592|consen 452 LKEGALEKRQGL--FARKRMLLLTNGPRLLYVDPQ----NLVLKGEIPWSPDLRVEL-----KNSSTFFIHTPNKVYYLE 520 (604)
T ss_pred HhHHHHHhhhhh--hhceeEEEecCCCeEEEEecc----cceeccccccCcccceee-----ccCcceEEECCccceecc
Confidence 345555554322 23567888874 455555533 344667777776544433 446899999999999887
Q ss_pred cCCHHHHHHHHHHHHHHHHhhC
Q 032301 107 ADSEKEKEDWINSIGRSIVQHS 128 (143)
Q Consensus 107 a~s~~e~~~W~~al~~~~~~~~ 128 (143)
-. ...+..|..||......+.
T Consensus 521 d~-~~~as~w~~ai~~~~~~~~ 541 (604)
T KOG0592|consen 521 DP-EQRASVWCKAIETVRKRYS 541 (604)
T ss_pred Cc-ccchhHHHHhhhhhhhccc
Confidence 53 4567789999999844433
No 103
>KOG2996 consensus Rho guanine nucleotide exchange factor VAV3 [Signal transduction mechanisms]
Probab=88.82 E-value=2.5 Score=34.13 Aligned_cols=105 Identities=16% Similarity=0.219 Sum_probs=69.0
Q ss_pred cCCCceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecC-c--ccCC-----CcceEE
Q 032301 24 WSNPERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGA-E--DVLN-----KQYAFE 95 (143)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~-~--~~~~-----~~~~f~ 95 (143)
++.+-..|-|.......+.-+.||..|.+..+...+...+ .......+.+....+.+.. . +..+ ..+.|.
T Consensus 403 ~GRpkiDGElki~s~~~~tkqdRyiFLfDkvviVCKrkG~--sy~lke~i~l~~y~m~d~~~~~kd~kk~~~~~ws~~f~ 480 (865)
T KOG2996|consen 403 FGRPKIDGELKITSTQAHTKQDRYIFLFDKVVIVCKRKGD--SYELKEIIYLNAYKMSDDPIDDKDNKKVSTITWSYGFY 480 (865)
T ss_pred hCCCCcCceEEEeehhcCCccceEEeEecceEEEeeccCc--chhHHHHHHHHhhccccCCCCchhhhhccceeeeeeEE
Confidence 4556677888776554556789999999999998887753 2233444555432211111 0 1111 257777
Q ss_pred EEeC-C-eEEEEEcCCHHHHHHHHHHHHHHHHhhCCC
Q 032301 96 LSTR-T-ETMYFIADSEKEKEDWINSIGRSIVQHSRS 130 (143)
Q Consensus 96 i~~~-~-~~~~~~a~s~~e~~~W~~al~~~~~~~~~~ 130 (143)
|++. + .-+-|+|.++.-.+.|+.++..++..-.+.
T Consensus 481 lI~tqg~ngl~fy~Kte~~kkkWmeqfema~SNi~Pd 517 (865)
T KOG2996|consen 481 LIHTQGRNGLEFYCKTEDLKKKWMEQFEMAKSNISPD 517 (865)
T ss_pred EEEEcCCcceEEEEecHHHHHHHHHHHHHHHhcCCcc
Confidence 7654 3 458899999999999999999998865554
No 104
>KOG1170 consensus Diacylglycerol kinase [Lipid transport and metabolism]
Probab=88.72 E-value=0.011 Score=48.33 Aligned_cols=95 Identities=17% Similarity=0.167 Sum_probs=60.5
Q ss_pred ceEEEEEEeCCCCCCceeEEEEEECCeEEEE-ecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCCeEEEEE
Q 032301 28 ERSGWLTKQGEYIKTWRRRWFVLKQGKLFWF-KESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRTETMYFI 106 (143)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~-~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~~~~~~~ 106 (143)
+..|...+.......|+.+++.+++..-.++ +... ......+.+....+-+. ....-++.|.+.++-+.+.++
T Consensus 3 ~~rgl~~~~~ne~Ea~k~r~~~~k~~~~~~vakTa~----g~~~~~~d~t~a~~~eS--s~~n~~~sf~vi~~~rk~r~~ 76 (1099)
T KOG1170|consen 3 VTRGLDNDVDNEREAWKQSILRAKDRMPEKVAKTAS----GPLFALLDLTSAHVAES--STNNPRPSFCVITPVRKHRLC 76 (1099)
T ss_pred cccccccccccHHHHHHHHHHHHHHHHHHHHHhccC----CccHHHHhccccccccc--ccCCCCCCeeEecccHHhhhh
Confidence 3455555555445578888887776653333 3322 11223333333222222 223457899999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHhhC
Q 032301 107 ADSEKEKEDWINSIGRSIVQHS 128 (143)
Q Consensus 107 a~s~~e~~~W~~al~~~~~~~~ 128 (143)
+++..++..|+.+++.......
T Consensus 77 adn~ke~e~wi~~~kt~q~~e~ 98 (1099)
T KOG1170|consen 77 ADNRKEMEKWINQSKTPQHLEF 98 (1099)
T ss_pred ccchhHHHHhhccccchhhccc
Confidence 9999999999999987766443
No 105
>KOG0517 consensus Beta-spectrin [Cytoskeleton]
Probab=86.79 E-value=0.015 Score=51.42 Aligned_cols=97 Identities=20% Similarity=0.364 Sum_probs=66.9
Q ss_pred ceEEEEEEe--------CCCCCCceeEEEEEECCeEEEEecCCCCCCC---Ccce--EEeCCceEEeecCcccCCCcceE
Q 032301 28 ERSGWLTKQ--------GEYIKTWRRRWFVLKQGKLFWFKESTVTRAS---KPRG--VIPVASCLTVKGAEDVLNKQYAF 94 (143)
Q Consensus 28 ~~~G~L~k~--------~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~---~~~~--~i~l~~~~~v~~~~~~~~~~~~f 94 (143)
.++|+|+++ ....+.|..-||++..+.+.+|++....... ...+ .+.+..+ .+....+..+++++|
T Consensus 2300 ~~eG~L~Rk~~~~A~e~k~~nRsw~~vy~~i~e~el~fykD~k~~~a~ve~~~r~e~~lel~~a-~i~~a~dy~kkk~v~ 2378 (2473)
T KOG0517|consen 2300 QLEGFLYRKHLLGALEIKASNRSWDNVYCRIREKELGFYKDAKKDLASVELLVRGEPPLELDMA-AIEVASDYHKKKHVF 2378 (2473)
T ss_pred HHHhHHHHHHHHhhhhhhhhcccHHHHHHHHHhccchhhcccCcccccchhhccCCcchhcchh-HHHHHHHHHHHhHhh
Confidence 467888654 1244689999999999999999988732111 0111 1222222 233334556778999
Q ss_pred EEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHH
Q 032301 95 ELSTRT-ETMYFIADSEKEKEDWINSIGRSIV 125 (143)
Q Consensus 95 ~i~~~~-~~~~~~a~s~~e~~~W~~al~~~~~ 125 (143)
.+..+. ..|.|.|.++++|+.|+.++...+.
T Consensus 2379 ~l~~~~gae~llq~k~ee~m~sWL~~~a~~~~ 2410 (2473)
T KOG0517|consen 2379 LLQLPPGAEHLLQAKDEEEMESWLRALAVKRA 2410 (2473)
T ss_pred hhcCCchHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 999765 6689999999999999999987775
No 106
>PF15277 Sec3-PIP2_bind: Exocyst complex component SEC3 N-terminal PIP2 binding PH; PDB: 3HIE_D 3A58_E.
Probab=79.15 E-value=11 Score=22.58 Aligned_cols=81 Identities=17% Similarity=0.223 Sum_probs=49.7
Q ss_pred eeEEEEEE----C-CeEEEEecCCCCCC-CCcceEEeCCceEEeecCcccCCCcceEEEEeCCeEEEEEcCCHHHHHHHH
Q 032301 44 RRRWFVLK----Q-GKLFWFKESTVTRA-SKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRTETMYFIADSEKEKEDWI 117 (143)
Q Consensus 44 ~~r~~vL~----~-~~l~~~~~~~~~~~-~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~~~~~~~a~s~~e~~~W~ 117 (143)
++|+.+|. + ..+.+++....... -....+-+|.....++...+. ...+.|.|... +.|+..|.|..|....+
T Consensus 4 K~r~Lclsv~~~~~~~v~l~k~K~~~~g~f~i~ktW~L~eL~~I~~~~~~-~~~~~F~l~~~-k~y~W~a~s~~Ek~~Fi 81 (91)
T PF15277_consen 4 KPRYLCLSVTNSPRIQVRLHKVKQNDNGSFQIGKTWDLDELKAIDGINPD-KDTPEFDLTFD-KPYYWEASSAKEKNTFI 81 (91)
T ss_dssp EEEEEEEEEETTETTEEEEEEEEE-CCS-EEEEEEEEGGG--EEEE-SSS---TTEEEEESS-SEEEEEESSHHHHHHHH
T ss_pred ccEEEEEEEecCCceEEEEEEEEecCCCcEEEeeEEehhhceeeeeecCC-CCCcCEEEEEC-CCcEEEeCCHHHHHHHH
Confidence 56676664 2 23666655442212 223456677776666654421 33578888874 49999999999999999
Q ss_pred HHHHHHHHh
Q 032301 118 NSIGRSIVQ 126 (143)
Q Consensus 118 ~al~~~~~~ 126 (143)
.+|-.....
T Consensus 82 ~~L~k~~~~ 90 (91)
T PF15277_consen 82 RSLWKLYQK 90 (91)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhcc
Confidence 999776543
No 107
>PF04714 BCL_N: BCL7, N-terminal conserver region; InterPro: IPR006804 The members of this group of sequences contain a conserved N-terminal domain which is found in the BCL7 family. The function of BCL7 proteins is unknown, though they may be involved in early development. Notably, BCL7B is commonly hemizygously deleted in patients with Williams syndrome [].
Probab=76.75 E-value=2.1 Score=22.66 Aligned_cols=21 Identities=19% Similarity=0.631 Sum_probs=18.6
Q ss_pred CCceeEEEEEECCeEEEEecC
Q 032301 41 KTWRRRWFVLKQGKLFWFKES 61 (143)
Q Consensus 41 ~~w~~r~~vL~~~~l~~~~~~ 61 (143)
..|.++|+.+.+..|.+|+--
T Consensus 28 r~wEKKWVtv~dtslriyKWV 48 (52)
T PF04714_consen 28 RKWEKKWVTVGDTSLRIYKWV 48 (52)
T ss_pred HHHhhceEEeccceEEEEEEE
Confidence 479999999999999999853
No 108
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=71.96 E-value=9.2 Score=32.42 Aligned_cols=36 Identities=28% Similarity=0.471 Sum_probs=31.6
Q ss_pred CceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCC
Q 032301 27 PERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKEST 62 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~ 62 (143)
.+++|.|+.+....+.|.+.+|||.+..|+|.....
T Consensus 475 svk~GiLy~kd~vdheWt~h~fvlt~~kl~ys~e~~ 510 (1267)
T KOG1264|consen 475 SVKQGILYMKDPVDHEWTRHYFVLTDAKLSYSDEIE 510 (1267)
T ss_pred hhhcceEEEecCCCCceeeeEEEEecceeEeehhcc
Confidence 468999999988889999999999999999986443
No 109
>cd05394 RasGAP_RASA2 RASA2 (or GAP1(m)) is a member of the GAP1 family of Ras GTPase-activating proteins that includes GAP1_IP4BP (or RASA3), CAPRI, and RASAL. In vitro, RASA2 has been shown to bind inositol 1,3,4,5-tetrakisphosphate (IP4), the water soluble inositol head group of the lipid second messenger phosphatidylinositol 3,4,5-trisphosphate (PIP3). In vivo studies also demonstrated that RASA2 binds PIP3, and it is recruited to the plasma membrane following agonist stimulation of PI 3-kinase. Furthermore, the membrane translocation is a consequence of the ability of its pleckstrin homology (PH) domain to bind PIP3.
Probab=71.96 E-value=1 Score=33.46 Aligned_cols=28 Identities=25% Similarity=0.473 Sum_probs=21.1
Q ss_pred cCCCceEEEEEEeCC-----CCCCceeEEEEEE
Q 032301 24 WSNPERSGWLTKQGE-----YIKTWRRRWFVLK 51 (143)
Q Consensus 24 ~~~~~~~G~L~k~~~-----~~~~w~~r~~vL~ 51 (143)
...++++|+|.|+.. +++.|++|||.|+
T Consensus 280 ~~~~~~e~~~~~r~~~~~~~~~~~~kkr~~~l~ 312 (313)
T cd05394 280 EPVHLKEGEMYKRAQGRTRIGKKNFKKRWFCLT 312 (313)
T ss_pred CchhhHHHHHHhhccCCCccccccchhheeecC
Confidence 345788999998742 2357999999986
No 110
>KOG3521 consensus Predicted guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=70.49 E-value=5.8 Score=32.59 Aligned_cols=97 Identities=10% Similarity=0.003 Sum_probs=58.4
Q ss_pred CceEEEEEEeCCCCCCceeEEEEEECCeEEEEecCCCCCC--CCcceEEeCCceEEeecCcccCCCcceEEEEeCC----
Q 032301 27 PERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFKESTVTRA--SKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRT---- 100 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~~~~~~~~--~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~---- 100 (143)
.+++|-+..+.+.. .=..-||+|.-+.|.+.+.-..+.+ +.....+.++.. ++... ..++.|.+++.+
T Consensus 427 LlleGdlrmKegk~-sK~DVhcfLfTDllLVcK~v~k~~drlKVIRpPll~dkl-v~q~~----~dpnsf~lVhLtEFh~ 500 (846)
T KOG3521|consen 427 LLLEGDLRMKEGKG-SKADVHCFLFTDLLLVCKKVQKKADRLKVIRPPLLMDKL-VCQYL----RDPNSFLLVHLTEFHT 500 (846)
T ss_pred hhhccceecccCCC-cccceeeeeehhHHHHhHHHhhhcccceeeccchhhcce-eeeec----CCCCceEEEeechhhh
Confidence 55678877664321 2235567776666666655441101 112222333332 33222 346888888754
Q ss_pred --eEEEEEcCCHHHHHHHHHHHHHHHHhhCC
Q 032301 101 --ETMYFIADSEKEKEDWINSIGRSIVQHSR 129 (143)
Q Consensus 101 --~~~~~~a~s~~e~~~W~~al~~~~~~~~~ 129 (143)
..|.+.|...++...|+.+|++|.....+
T Consensus 501 a~~ayt~hcs~p~d~~~W~D~l~~Aq~~~Qk 531 (846)
T KOG3521|consen 501 AQAAYTMHCSGPEDTLRWTDMLKMAQDELQK 531 (846)
T ss_pred hhhhheeecCChhhHHHHHHHHHHHHHHHHH
Confidence 34889999999999999999999876543
No 111
>cd05128 RasGAP_GAP1_like The GAP1 family of Ras GTPase-activating proteins includes GAP1(m) (or RASA2), GAP1_IP4BP (or RASA3), Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), and Ras GTPase activating-like proteins (RASAL) or RASAL1. The members are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin homology domain that is associated with a Bruton's tyrosine kinase motif. While this domain structure is conserved, a small change in the function of each individual domain and the interaction between domains has a marked effect on the regulation of each protein.
Probab=66.34 E-value=1.8 Score=32.28 Aligned_cols=27 Identities=22% Similarity=0.495 Sum_probs=20.2
Q ss_pred CCCceEEEEEEeCC-----CCCCceeEEEEEE
Q 032301 25 SNPERSGWLTKQGE-----YIKTWRRRWFVLK 51 (143)
Q Consensus 25 ~~~~~~G~L~k~~~-----~~~~w~~r~~vL~ 51 (143)
..++++|++.++.. ..+.||+|||.|+
T Consensus 284 ~~~~k~g~~~~~~~~~~~~~~~~~k~r~~~lt 315 (315)
T cd05128 284 PVVLKEGFMIKRAQGRGRLGRKNFKKRYFRLT 315 (315)
T ss_pred chhhhhhhhHhhcccCCCccccchhheeeecC
Confidence 45788999887632 3357999999884
No 112
>cd05134 RasGAP_RASA3 RASA3 (or GAP1_IP4BP) is a member of the GAP1 family and has been shown to specifically bind 1,3,4,5-tetrakisphosphate (IP4). Thus, RASA3 may function as an IP4 receptor. The members of GAP1 family are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. Purified RASA3 stimulates GAP activity on Ras with about a five-fold lower potency than p120RasGAP, but shows no GAP-stimulating activity at all against Rac or Rab3A.
Probab=65.91 E-value=2.3 Score=31.60 Aligned_cols=28 Identities=25% Similarity=0.635 Sum_probs=20.5
Q ss_pred CCCceEEEEEEeC--C---CCCCceeEEEEEEC
Q 032301 25 SNPERSGWLTKQG--E---YIKTWRRRWFVLKQ 52 (143)
Q Consensus 25 ~~~~~~G~L~k~~--~---~~~~w~~r~~vL~~ 52 (143)
..++++|.|.++. . ..+.|++|||.|+.
T Consensus 278 ~~~~~~~~~~~r~~~~~~~~~~~~k~r~~~lt~ 310 (310)
T cd05134 278 PILLKEGFMIKRAQGRKRFGMKNFKKRWFRLTN 310 (310)
T ss_pred cchhhhhhHHHhcccCCcccccchhheeeecCC
Confidence 4578899998753 2 23579999999863
No 113
>KOG4095 consensus Uncharacterized conserved protein (tumor-specific protein BCL7 in humans) [General function prediction only]
Probab=65.82 E-value=3.3 Score=27.27 Aligned_cols=21 Identities=19% Similarity=0.626 Sum_probs=18.8
Q ss_pred CCceeEEEEEECCeEEEEecC
Q 032301 41 KTWRRRWFVLKQGKLFWFKES 61 (143)
Q Consensus 41 ~~w~~r~~vL~~~~l~~~~~~ 61 (143)
+.|.++|+.+.+..|.+|+--
T Consensus 29 RrWEKKwVtvgDTslRIyKWV 49 (165)
T KOG4095|consen 29 RRWEKKWVTVGDTSLRIYKWV 49 (165)
T ss_pred HHHhhheEeecccceEEEEee
Confidence 589999999999999999843
No 114
>cd05135 RasGAP_RASAL Ras GTPase activating-like protein (RASAL) or RASAL1 is a member of the GAP1 family, and a Ca2+ sensor responding in-phase to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. It contains a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. RASAL, like Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), is a cytosolic protein that undergoes a rapid translocation to the plasma membrane in response to receptor-mediated elevation in the concentration of intracellular free Ca2+, a translocation that activates its ability to function as a RasGAP. However, unlike RASAL4, RASAL undergoes an oscillatory translocation to the plasma membrane that occurs in synchrony with repetitive Ca2+ spikes.
Probab=62.74 E-value=2.5 Score=31.74 Aligned_cols=27 Identities=26% Similarity=0.474 Sum_probs=19.6
Q ss_pred CCCceEEEEEEeCC------CCCCceeEEEEEE
Q 032301 25 SNPERSGWLTKQGE------YIKTWRRRWFVLK 51 (143)
Q Consensus 25 ~~~~~~G~L~k~~~------~~~~w~~r~~vL~ 51 (143)
+-++++|++.++.. .+..|++|||.|+
T Consensus 301 ~~~~~eg~~~~r~~~~~~~~~~~~fkk~~f~l~ 333 (333)
T cd05135 301 SVTVKEGYLHKRKTEGPQLLTRFAFKKRYFWLS 333 (333)
T ss_pred CchhhhhHhhhccccCCCCcccccccceeeecC
Confidence 45678999988742 2235999999874
No 115
>KOG3520 consensus Predicted guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=58.20 E-value=50 Score=29.22 Aligned_cols=59 Identities=22% Similarity=0.373 Sum_probs=42.3
Q ss_pred cceEEeCCceEEeecCcccCCCcceEEEEeCC---eEEEEEcCCHHHHHHHHHHHHHHHHhhCCC
Q 032301 69 PRGVIPVASCLTVKGAEDVLNKQYAFELSTRT---ETMYFIADSEKEKEDWINSIGRSIVQHSRS 130 (143)
Q Consensus 69 ~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~---~~~~~~a~s~~e~~~W~~al~~~~~~~~~~ 130 (143)
...+|.|... .+.... ..++-.|.|.+.. ..|-+.|.|..|.+.|+..|+.++......
T Consensus 666 ~spVisL~~l-ivRevA--td~ka~FlIs~s~~~pqmYEL~a~T~serntW~~li~~~v~s~~~~ 727 (1167)
T KOG3520|consen 666 KSPVISLQKL-IVREVA--TDEKAFFLISMSDQGPEMYELVAQSKSERNTWIQLIQDAVASCPRN 727 (1167)
T ss_pred CCCceehHHH-HHHHHh--ccccceEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHhCCcc
Confidence 3567777764 332211 2446778888763 779999999999999999999999854433
No 116
>PF06017 Myosin_TH1: Myosin tail; InterPro: IPR010926 These proteins share a region of sequence similarity with the tail of myosin (for example O00159 from SWISSPROT). Myosins act as molecular motors. ; GO: 0003774 motor activity, 0016459 myosin complex
Probab=54.64 E-value=68 Score=22.05 Aligned_cols=90 Identities=10% Similarity=0.136 Sum_probs=56.4
Q ss_pred CCceEEEEEEeCCCCCCceeEEEEEECCeEEEEe-----cCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCC
Q 032301 26 NPERSGWLTKQGEYIKTWRRRWFVLKQGKLFWFK-----ESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRT 100 (143)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~~~-----~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~ 100 (143)
.+++...+.|-.. ...-.+|.++|++..++... +.. .......|+|..+..+...+ .....|.|..+.
T Consensus 49 ~vlFs~~v~K~nr-~~K~~~R~livT~~~iY~l~~~~~~~~~---~~~~kr~i~l~~I~~IsvS~---~~D~~~vihv~~ 121 (199)
T PF06017_consen 49 KVLFSDRVQKYNR-RNKPQPRILIVTDKAIYLLDQRKVKDPK---KYKLKRRIPLSDITGISVSP---LSDNFFVIHVPG 121 (199)
T ss_pred ceEEEEEEEEecC-CCCccceEEEEeCCeEEEEEEeecCCce---eeEEEeccCcccccEEEEcc---CCCCEEEEEECC
Confidence 4667777777764 45668999999999998885 322 33356677777665554432 223445555444
Q ss_pred -eEEEEEcCCHHHHHHHHHHHHHHHH
Q 032301 101 -ETMYFIADSEKEKEDWINSIGRSIV 125 (143)
Q Consensus 101 -~~~~~~a~s~~e~~~W~~al~~~~~ 125 (143)
.-++|.+....| -+..|..+..
T Consensus 122 ~~D~il~~~~k~E---lv~~L~~~~~ 144 (199)
T PF06017_consen 122 EGDLILESDFKTE---LVTILCKAYK 144 (199)
T ss_pred CCCEEEEeCcHHH---HHHHHHHHHH
Confidence 557788876644 4455555554
No 117
>COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only]
Probab=51.49 E-value=54 Score=23.39 Aligned_cols=28 Identities=21% Similarity=0.263 Sum_probs=24.1
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHHHhhC
Q 032301 101 ETMYFIADSEKEKEDWINSIGRSIVQHS 128 (143)
Q Consensus 101 ~~~~~~a~s~~e~~~W~~al~~~~~~~~ 128 (143)
.+.++.|.+.+|+-+|+..|+.++..-.
T Consensus 249 g~~~iaapsREdave~l~iik~a~~~v~ 276 (290)
T COG4026 249 GTVYIAAPSREDAVEELEIIKEAIEEVI 276 (290)
T ss_pred eeeeeecCchHHHHHHHHHHHHHHHHhc
Confidence 5678999999999999999999976443
No 118
>PF14470 bPH_3: Bacterial PH domain
Probab=50.97 E-value=49 Score=19.30 Aligned_cols=76 Identities=14% Similarity=0.126 Sum_probs=55.1
Q ss_pred CceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCCeEEEEEcCCHHHHHHHHHHHH
Q 032301 42 TWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRTETMYFIADSEKEKEDWINSIG 121 (143)
Q Consensus 42 ~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~~~~~~~a~s~~e~~~W~~al~ 121 (143)
....-++++++..+.++..... .......+++..+..++.... -....+.|.+.++.+-+..-+..+++.-++.|+
T Consensus 20 ~~~~g~l~~TnkRlif~~~~~~--~~~~~~~i~y~~I~~v~~~~g--~~~~~i~i~~~~~~~~i~~i~k~~~~~~~~~i~ 95 (96)
T PF14470_consen 20 TSFPGVLVLTNKRLIFYSKGMF--GGKKFESIPYDDITSVSFKKG--ILGGKITIETNGEKIKIDNIQKGDVKEFYEYIK 95 (96)
T ss_pred cCceeEEEEeCCEEEEEEcccC--CCceEEEEEhhheEEEEEEcc--ccccEEEEEECCEEEEEEEcCHHHHHHHHHHHh
Confidence 5677789999999988877532 234568888888877765432 224568888888888888778888888777764
No 119
>KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms]
Probab=49.66 E-value=12 Score=31.65 Aligned_cols=98 Identities=14% Similarity=0.227 Sum_probs=58.7
Q ss_pred ceEEEEEEeCC--CCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEE-e-------ecCcccCCCcceEEEE
Q 032301 28 ERSGWLTKQGE--YIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLT-V-------KGAEDVLNKQYAFELS 97 (143)
Q Consensus 28 ~~~G~L~k~~~--~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~-v-------~~~~~~~~~~~~f~i~ 97 (143)
.+.||+..... ....|---|-.+.-....+|.......-..|.-.|.++.-.- . ...++...--+.+.|.
T Consensus 813 rmnGwlRVyRdd~~~stwl~~wammdl~~~~fy~~~gadple~p~f~idlnkeqw~Lrtgqe~~~~v~dimrvfnvliIK 892 (1265)
T KOG0976|consen 813 RMNGWLRVYRDDAEASTWLLGWAMMDLEGDDFYDMNGADPLEDPVFLIDLNKEQWALRTGQESLTHVPDIMRVFNVLIIK 892 (1265)
T ss_pred hcccceeeeccccchhHHHHHHHHhhhcccchhhccCCccccCceEEeecchhHHHHHhccccccCCcchhhhheeeeec
Confidence 46788876532 224576666665544444554433221345666777664111 1 1111111123566666
Q ss_pred eCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 032301 98 TRTETMYFIADSEKEKEDWINSIGRSIV 125 (143)
Q Consensus 98 ~~~~~~~~~a~s~~e~~~W~~al~~~~~ 125 (143)
.+.+.+++.+.+...+.+|..+|+.+..
T Consensus 893 ~~~r~l~I~ap~~~saerwA~CLq~aqk 920 (1265)
T KOG0976|consen 893 DLERLLMIAAPSPKSAERWALCLQDAQK 920 (1265)
T ss_pred chhhhheeecCCCccHHHHHHHHHHHHH
Confidence 7789999999999999999999998754
No 120
>KOG1729 consensus FYVE finger containing protein [General function prediction only]
Probab=41.86 E-value=8.5 Score=28.38 Aligned_cols=87 Identities=17% Similarity=0.275 Sum_probs=52.3
Q ss_pred CCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCCeEEEEEcCCHHHHHHHHHHH
Q 032301 41 KTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRTETMYFIADSEKEKEDWINSI 120 (143)
Q Consensus 41 ~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~~~~~~~a~s~~e~~~W~~al 120 (143)
+.-+.+.|.|..+.+.|-........-.....+++.+. ..+...+...-+++.+|.+..+...+.+.+..++.+|+..|
T Consensus 58 k~~q~r~~~l~~D~~~~~~~~~~~~~~~~~~~~~le~~-~~~~~~~~~~~~~~~~~~S~~ks~~~~~as~~ek~e~~~~i 136 (288)
T KOG1729|consen 58 KKLQSRSFFLFNDILVYGNIVSDNKLLNKNHIIPLEGV-SQESRSDNERVRNGWQILSALKSFTVLAASQTEKNEWQNHI 136 (288)
T ss_pred cccccccccccccchhhcccccCHHHHhHHhcccccch-hhhhhccccccccchhhhcccchhhhhcchhhhhHHHHHHH
Confidence 45788888888887766443331100011223333221 12222222233557888888888889999999999999888
Q ss_pred HHHHHhhC
Q 032301 121 GRSIVQHS 128 (143)
Q Consensus 121 ~~~~~~~~ 128 (143)
.++.....
T Consensus 137 ~~~~~~~l 144 (288)
T KOG1729|consen 137 TECVEDLL 144 (288)
T ss_pred HHHHHHHH
Confidence 87766443
No 121
>KOG1329 consensus Phospholipase D1 [Lipid transport and metabolism]
Probab=36.87 E-value=31 Score=29.45 Aligned_cols=93 Identities=11% Similarity=0.141 Sum_probs=60.5
Q ss_pred ceEEEEEEeC--CCCCCceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeCCeEEEE
Q 032301 28 ERSGWLTKQG--EYIKTWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTRTETMYF 105 (143)
Q Consensus 28 ~~~G~L~k~~--~~~~~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~~~~~~~ 105 (143)
-++|++.++. .....|.++|.+++...+.|+.+.. ...-...+..++. .. ...+....+..|.+....+.+.+
T Consensus 176 h~~g~v~~~~~~~~~~G~s~~w~~v~~s~~~~~~~~~---~~~~~~Il~~d~~-~~-~~~~~~~~~~~~~~~~~~~~~~~ 250 (887)
T KOG1329|consen 176 HKAGYVIFRVKGARVPGWSKRWGRVKISFLQYCSGHR---IGGWFPILDNDGK-PH-QKGSNESLRLGFTPMEKDRNLKL 250 (887)
T ss_pred ccccEEEEeecCCccccceeEEEEeccchhhhhcccc---ccceeeeeccCCc-cc-cCCcccceEEeeEeechhhhhhh
Confidence 3577887762 2334699999999999998888654 2222333333331 11 11122233567777777888888
Q ss_pred EcCCHHHHHHHHHHHHHHHH
Q 032301 106 IADSEKEKEDWINSIGRSIV 125 (143)
Q Consensus 106 ~a~s~~e~~~W~~al~~~~~ 125 (143)
.+.+..+...|..++-.+..
T Consensus 251 ~~~s~~~~r~~~~~~~~~~~ 270 (887)
T KOG1329|consen 251 GCKSGRSFRGWPGTIFPQRK 270 (887)
T ss_pred eeccccccCCccceeeehhc
Confidence 99998999999888866654
No 122
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase
Probab=31.26 E-value=1e+02 Score=24.58 Aligned_cols=27 Identities=11% Similarity=0.241 Sum_probs=23.4
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 032301 101 ETMYFIADSEKEKEDWINSIGRSIVQH 127 (143)
Q Consensus 101 ~~~~~~a~s~~e~~~W~~al~~~~~~~ 127 (143)
+.+.|.+.+.+....|+++|+..+...
T Consensus 82 ~~~~~~~~~~~~~~~w~~~~~~~~~~~ 108 (481)
T PLN02958 82 KDFVFEPLSDESRRLWCQKLRDYLDSL 108 (481)
T ss_pred eeEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 568899999999999999999877643
No 123
>KOG3518 consensus Putative guanine nucleotide exchange factor [General function prediction only]
Probab=28.81 E-value=41 Score=25.57 Aligned_cols=40 Identities=23% Similarity=0.444 Sum_probs=31.6
Q ss_pred CCcceEEEEe---CCeEEEEEcCCHHHHHHHHHHHHHHHHhhC
Q 032301 89 NKQYAFELST---RTETMYFIADSEKEKEDWINSIGRSIVQHS 128 (143)
Q Consensus 89 ~~~~~f~i~~---~~~~~~~~a~s~~e~~~W~~al~~~~~~~~ 128 (143)
..+..|++.+ |.-.+.|.|.+.++..-|+..|++.+..+.
T Consensus 394 eeplsfqv~~fdnpkaq~~fma~sme~kr~wm~elkrlildh~ 436 (521)
T KOG3518|consen 394 EEPLSFQVFHFDNPKAQHTFMAKSMEDKRLWMLELKRLILDHH 436 (521)
T ss_pred CCCceeEEEecCCcchhhhhhhhhhHHHHHHHHHHHHHHHhhh
Confidence 3456777764 456689999999999999999998877544
No 124
>PF10882 bPH_5: Bacterial PH domain; InterPro: IPR020482 This entry contains membrane proteins with no known function.
Probab=27.46 E-value=1.4e+02 Score=17.73 Aligned_cols=29 Identities=14% Similarity=0.323 Sum_probs=20.0
Q ss_pred CcceEEEEeCCeEEEEEcCCHHHHHHHHHHHH
Q 032301 90 KQYAFELSTRTETMYFIADSEKEKEDWINSIG 121 (143)
Q Consensus 90 ~~~~f~i~~~~~~~~~~a~s~~e~~~W~~al~ 121 (143)
....+.|.+.++.+++.+++.++ .+.+|+
T Consensus 69 ~~~~i~I~t~~~~y~isp~~~~~---fi~~l~ 97 (100)
T PF10882_consen 69 NKNVILIKTKDKTYVISPEDPEE---FIEALK 97 (100)
T ss_pred CCCEEEEEECCceEEEcCCCHHH---HHHHHH
Confidence 35677888888889997776554 455554
No 125
>COG4687 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.96 E-value=1.7e+02 Score=18.47 Aligned_cols=68 Identities=12% Similarity=0.114 Sum_probs=40.7
Q ss_pred EEEECCeEEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCcceEEEEeC-CeEEEEEcCCHHHHHHHHHH
Q 032301 48 FVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQYAFELSTR-TETMYFIADSEKEKEDWINS 119 (143)
Q Consensus 48 ~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~~~f~i~~~-~~~~~~~a~s~~e~~~W~~a 119 (143)
+.+-+..+-+|.+... ..--.|+.+.+..+...-...+-...|.|.+. ...+.|...+......|+..
T Consensus 27 iliGDkgfEFYn~~nv----~k~iqipWs~i~~v~vsvs~KK~~~~f~i~td~~gk~~FaSkdsg~iLk~ir~ 95 (122)
T COG4687 27 ILIGDKGFEFYNDRNV----EKFIQIPWSEINEVDVSVSLKKWGRQFSIFTDTQGKVRFASKDSGKILKKIRE 95 (122)
T ss_pred EEEcccceeecCCCCh----hheeEecHHHhheeheeehhhhhcceEEEEEcCCceEEEEeCCchhHHHHHHH
Confidence 4455667888888762 22333443332222111111233567899987 57899999998888888764
No 126
>KOG4471 consensus Phosphatidylinositol 3-phosphate 3-phosphatase myotubularin MTM1 [Lipid transport and metabolism; Intracellular trafficking, secretion, and vesicular transport]
Probab=24.27 E-value=2.7e+02 Score=23.21 Aligned_cols=70 Identities=13% Similarity=0.289 Sum_probs=38.7
Q ss_pred EEEEecCCCCCCCCcceEEeCCceEEeecCcccCCCc--ceEEEEeCC-eEEEEEcCCHHHHH-HHHHHHHHHHHh
Q 032301 55 LFWFKESTVTRASKPRGVIPVASCLTVKGAEDVLNKQ--YAFELSTRT-ETMYFIADSEKEKE-DWINSIGRSIVQ 126 (143)
Q Consensus 55 l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~~~~~~~~--~~f~i~~~~-~~~~~~a~s~~e~~-~W~~al~~~~~~ 126 (143)
-.|++..+. ...+...++|.-+..|+.......+. +.+.|...+ +.+.+.-...+..+ +|+..|.+++..
T Consensus 65 Rl~fks~~t--~~~~~~~VPLg~Ie~vek~~~~~~g~ns~~L~i~CKDmr~lR~~fk~~~q~r~~~~e~L~~~~~p 138 (717)
T KOG4471|consen 65 RLYFKSKET--DPPFVLDVPLGVIERVEKRGGATSGENSFGLEITCKDMRNLRCAFKQEEQCRRDWFERLNRAAFP 138 (717)
T ss_pred EEEEEeccC--CCceeEeechhhhhhhhhcCccccCCcceeEEEEeccccceeeecCcccccHHHHHHHHHHhcCC
Confidence 344454442 22344555554444444333222333 455555555 66777766666666 899999887663
No 127
>PF06523 DUF1106: Protein of unknown function (DUF1106); InterPro: IPR009490 This family consists of several hypothetical bacterial proteins found in Escherichia coli and Citrobacter rodentium. The function of this family is unknown.
Probab=23.55 E-value=55 Score=18.81 Aligned_cols=11 Identities=36% Similarity=0.628 Sum_probs=7.5
Q ss_pred ChhhhhHHhcc
Q 032301 1 MGSLWRAISGQ 11 (143)
Q Consensus 1 ~~~~~~~~~~~ 11 (143)
|.|||.++.-.
T Consensus 1 maslwkrlfy~ 11 (91)
T PF06523_consen 1 MASLWKRLFYF 11 (91)
T ss_pred ChhHhHHHhcC
Confidence 67888777643
No 128
>cd01269 PLX Pollux (PLX) Phosphotyrosine-binding (PTB) domain. Pollux (PLX) Phosphotyrosine-binding (PTB) domain. PLX is calmodulin-binding protein containing a TBC domain, which is conserved from yeast to man, but it only has an N-terminal PTB domain in mammals. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=22.68 E-value=1.7e+02 Score=18.92 Aligned_cols=24 Identities=8% Similarity=0.159 Sum_probs=20.0
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHHH
Q 032301 102 TMYFIADSEKEKEDWINSIGRSIV 125 (143)
Q Consensus 102 ~~~~~a~s~~e~~~W~~al~~~~~ 125 (143)
.|+|+|.|++.+.+-+.+|..+-.
T Consensus 103 CyVFqc~Se~la~eI~lti~QAF~ 126 (129)
T cd01269 103 CYVFQCADESLVDEVMLTLKQAFS 126 (129)
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHh
Confidence 489999999999998888876643
No 129
>PF08671 SinI: Anti-repressor SinI; InterPro: IPR010981 The SinR repressor is part of a group of Sin (sporulation inhibition) proteins in Bacillus subtilis that regulate the commitment to sporulation in response to extreme adversity []. SinR is a tetrameric repressor protein that binds to the promoters of genes essential for entry into sporulation and prevents their transcription. This repression is overcome through the activity of SinI, which disrupts the SinR tetramer through the formation of a SinI-SinR heterodimer, thereby allowing sporulation to proceed. The SinR structure consists of two domains: a dimerisation domain stabilised by a hydrophobic core, and a DNA-binding domain that is identical to domains of the bacteriophage 434 CI and Cro proteins that regulate prophage induction. The dimerisation domain is a four-helical bundle formed from two helices from the C-terminal residues of SinR and two helices from the central residues of SinI. These regions in SinR and SinI are similar in both structure and sequence. The interaction of SinR monomers to form tetramers is weaker than between SinR and SinI, since SinI can effectively disrupt SinR tetramers. This entry represents the dimerisation domain in both SinI and SinR proteins.; GO: 0005488 binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1B0N_A 2YAL_A.
Probab=22.35 E-value=1e+02 Score=14.38 Aligned_cols=13 Identities=23% Similarity=0.590 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHh
Q 032301 114 EDWINSIGRSIVQ 126 (143)
Q Consensus 114 ~~W~~al~~~~~~ 126 (143)
.+|+.-|+.|...
T Consensus 3 ~EW~~Li~eA~~~ 15 (30)
T PF08671_consen 3 EEWVELIKEAKES 15 (30)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 4799999998874
No 130
>PF12456 hSac2: Inositol phosphatase ; InterPro: IPR022158 This domain family is found in eukaryotes, and is approximately 120 amino acids in length. The family is found in association with PF02383 from PFAM. hSac2 functions as an inositol polyphosphate 5-phosphatase.
Probab=20.99 E-value=2.2e+02 Score=17.71 Aligned_cols=57 Identities=16% Similarity=0.223 Sum_probs=37.3
Q ss_pred CCceEEEEEEeCCCCC---CceeEEEEEECCeEEEEecCCCCCCCCcceEEeCCceEEee
Q 032301 26 NPERSGWLTKQGEYIK---TWRRRWFVLKQGKLFWFKESTVTRASKPRGVIPVASCLTVK 82 (143)
Q Consensus 26 ~~~~~G~L~k~~~~~~---~w~~r~~vL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~v~ 82 (143)
.....||+........ .-+.+-+.|++..++..+=.-....-.....++|..+..+.
T Consensus 29 e~~i~gW~L~~~~~~~~~~~e~E~vlLLTd~alyi~~YD~~~~kv~~~~ri~L~~I~~I~ 88 (115)
T PF12456_consen 29 EEFIGGWLLTEPDHWNKTENEEERVLLLTDKALYICKYDFIMEKVSQFQRIPLNDIDKIQ 88 (115)
T ss_pred CcEEEEEEEEecCcccCCCcccceEEEEecCEEEEEEecCCCccEEEEEEEecccCcEEE
Confidence 4678999988754445 67899999999987766544321122234667777665554
No 131
>KOG3549 consensus Syntrophins (type gamma) [Extracellular structures]
Probab=20.69 E-value=1.7e+02 Score=22.51 Aligned_cols=36 Identities=28% Similarity=0.447 Sum_probs=27.6
Q ss_pred CCcceEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHH
Q 032301 89 NKQYAFELSTRT--ETMYFIADSEKEKEDWINSIGRSI 124 (143)
Q Consensus 89 ~~~~~f~i~~~~--~~~~~~a~s~~e~~~W~~al~~~~ 124 (143)
.+.+.|++...+ .+=++.|.+.++..+|+.||-.-+
T Consensus 223 lRqNAFeV~aldGvstGii~c~~a~d~~dWL~ait~Ni 260 (505)
T KOG3549|consen 223 LRQNAFEVRALDGVSTGIIHCDEAADLSDWLKAITDNI 260 (505)
T ss_pred hhhccceEEeecccccceeEEhhhhHHHHHHHHHHHHH
Confidence 446788888655 345788999999999999986543
No 132
>KOG2677 consensus Stoned B synaptic vesicle biogenesis protein [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.37 E-value=2.3e+02 Score=23.87 Aligned_cols=96 Identities=15% Similarity=0.260 Sum_probs=57.8
Q ss_pred ceEEEEEEeCC-------CCCCceeEEEEEECC-eEEEEecCCCCCCCCcceEEeCCceEEeecC--c--ccCCCcceEE
Q 032301 28 ERSGWLTKQGE-------YIKTWRRRWFVLKQG-KLFWFKESTVTRASKPRGVIPVASCLTVKGA--E--DVLNKQYAFE 95 (143)
Q Consensus 28 ~~~G~L~k~~~-------~~~~w~~r~~vL~~~-~l~~~~~~~~~~~~~~~~~i~l~~~~~v~~~--~--~~~~~~~~f~ 95 (143)
.+.||-...+. ..+.|...|+.|.+. .|..|-... ...|..-+.|.-|..+... + +..++-|...
T Consensus 446 P~~GW~~MlRiPeKKn~MssR~WgPifvkl~~~g~LqlYyeqg---lekPf~E~~L~~~~~lSep~lqnydv~GkIHtvk 522 (922)
T KOG2677|consen 446 PRDGWPMMLRIPEKKNIMSSRHWGPIFVKLTDTGYLQLYYEQG---LEKPFREFKLEICHELSEPRLQNYDVNGKIHTVK 522 (922)
T ss_pred CCCCCcceeecchhhhhhhhccccceEEEEcCCceEEEeeccc---ccchHHHHhhhhhhccCchhhhccccccceeEEE
Confidence 44577644321 236899999999876 776666554 3445555555543332211 0 1234556555
Q ss_pred EEe------------------CC--eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 032301 96 LST------------------RT--ETMYFIADSEKEKEDWINSIGRSIVQ 126 (143)
Q Consensus 96 i~~------------------~~--~~~~~~a~s~~e~~~W~~al~~~~~~ 126 (143)
|.. .. ..+-|...+..+....+++.+.-+.+
T Consensus 523 i~~V~YkEK~ky~pk~~v~H~a~~eq~lKlGstny~dfl~FittVed~Lmk 573 (922)
T KOG2677|consen 523 IDRVTYKEKKKYQPKPAVAHTAEREQVLKLGSTNYDDFLSFITTVEDRLMK 573 (922)
T ss_pred EEEEEeehhcccCCCCccccchhhhhhhhccCCcHHHHHHHHHHHHHHHhc
Confidence 542 11 23567788999999999998877664
Done!