Your job contains 1 sequence.
>032302
MFLTRFIGRAFLAAAAKSESSAATAAAASMATSRHNPLEEFFENDRGPDDQKPVYGRSWK
ASELRLKSWDDLNKLWYVLLKEKNMLMTQQQMLHAQNLKFPNPERIPKVRKSMCRIKQVL
TERAIEEPDPRRSAEMKRMINAL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 032302
(143 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2026550 - symbol:AT1G07830 species:3702 "Arabi... 527 1.1e-50 1
MGI|MGI:1921850 - symbol:Mrpl47 "mitochondrial ribosomal ... 208 6.7e-17 1
UNIPROTKB|F1MNT0 - symbol:MRPL47 "39S ribosomal protein L... 206 1.1e-16 1
UNIPROTKB|Q08DT6 - symbol:MRPL47 "39S ribosomal protein L... 206 1.1e-16 1
UNIPROTKB|E2QXX0 - symbol:MRPL47 "Uncharacterized protein... 206 1.1e-16 1
RGD|1307531 - symbol:Mrpl47 "mitochondrial ribosomal prot... 206 1.1e-16 1
DICTYBASE|DDB_G0283823 - symbol:DDB_G0283823 species:4468... 205 1.4e-16 1
UNIPROTKB|F1P1G0 - symbol:MRPL47 "Uncharacterized protein... 205 1.4e-16 1
UNIPROTKB|Q9HD33 - symbol:MRPL47 "39S ribosomal protein L... 201 3.7e-16 1
WB|WBGene00015092 - symbol:mrpl-47 species:6239 "Caenorha... 199 6.0e-16 1
UNIPROTKB|F1SGC7 - symbol:MRPL47 "Uncharacterized protein... 198 7.7e-16 1
FB|FBgn0014023 - symbol:mRpL47 "mitochondrial ribosomal p... 189 6.9e-15 1
POMBASE|SPCC4G3.06c - symbol:mrpl4 "mitochondrial ribosom... 173 3.4e-13 1
ASPGD|ASPL0000003990 - symbol:AN5897 species:162425 "Emer... 150 9.4e-11 1
CGD|CAL0006009 - symbol:orf19.6136 species:5476 "Candida ... 138 6.4e-09 1
SGD|S000004431 - symbol:MRPL4 "Mitochondrial ribosomal pr... 131 4.1e-08 1
>TAIR|locus:2026550 [details] [associations]
symbol:AT1G07830 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005761 "mitochondrial ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=RCA] InterPro:IPR001854
InterPro:IPR010729 Pfam:PF06984 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0006412 GO:GO:0003735 GO:GO:0005761
Gene3D:1.10.287.310 SUPFAM:SSF46561 TIGRFAMs:TIGR00012
PANTHER:PTHR21183 eggNOG:NOG116806 EMBL:AF375438 EMBL:AY081746
IPI:IPI00522270 RefSeq:NP_172261.1 UniGene:At.22253
ProteinModelPortal:Q94JQ7 SMR:Q94JQ7 STRING:Q94JQ7 PaxDb:Q94JQ7
PRIDE:Q94JQ7 EnsemblPlants:AT1G07830.1 GeneID:837298
KEGG:ath:AT1G07830 TAIR:At1g07830 HOGENOM:HOG000005920
InParanoid:Q94JQ7 OMA:PERIPKV PhylomeDB:Q94JQ7
ProtClustDB:CLSN2682751 Genevestigator:Q94JQ7 Uniprot:Q94JQ7
Length = 144
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 101/144 (70%), Positives = 109/144 (75%)
Query: 1 MFLTRFIGRAFLXXXXXXXXXXXXXXXXXXXXXRHNPLEEFFENDRGPDDQKPV-YGRSW 59
MFLTRF+GR FL NPLEEFFE DR D+ KPV YGR W
Sbjct: 1 MFLTRFVGRRFLAAASARSESTTAAAAASTIRTPTNPLEEFFEFDRSQDEDKPVVYGRGW 60
Query: 60 KASELRLKSWDDLNKLWYVLLKEKNMLMTQQQMLHAQNLKFPNPERIPKVRKSMCRIKQV 119
KASELRLKSWDDL KLWYVLLKEKNMLMTQ+QML AQN++FPNPERIPKVR+SMCRIK V
Sbjct: 61 KASELRLKSWDDLQKLWYVLLKEKNMLMTQRQMLQAQNMQFPNPERIPKVRRSMCRIKHV 120
Query: 120 LTERAIEEPDPRRSAEMKRMINAL 143
LTERAIEEPD RRSAEMKRM+N +
Sbjct: 121 LTERAIEEPDSRRSAEMKRMVNGM 144
>MGI|MGI:1921850 [details] [associations]
symbol:Mrpl47 "mitochondrial ribosomal protein L47"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005761
"mitochondrial ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] InterPro:IPR010729 Pfam:PF06984
MGI:MGI:1921850 GO:GO:0005739 GO:GO:0006412 GO:GO:0003735
GO:GO:0005761 PANTHER:PTHR21183 eggNOG:NOG116806 CTD:57129
HOGENOM:HOG000019703 HOVERGEN:HBG050019 OrthoDB:EOG4ZKJNC
OMA:KSGAPWT EMBL:BC029173 EMBL:BC038065 EMBL:BC087953
IPI:IPI00322422 RefSeq:NP_083293.1 UniGene:Mm.288960
ProteinModelPortal:Q8K2Y7 SMR:Q8K2Y7 PhosphoSite:Q8K2Y7
PaxDb:Q8K2Y7 PRIDE:Q8K2Y7 Ensembl:ENSMUST00000043966 GeneID:74600
KEGG:mmu:74600 UCSC:uc008owp.2 GeneTree:ENSGT00390000002837
InParanoid:Q8K2Y7 ChiTaRS:MRPL47 NextBio:341189 Bgee:Q8K2Y7
CleanEx:MM_MRPL47 Genevestigator:Q8K2Y7
GermOnline:ENSMUSG00000037531 Uniprot:Q8K2Y7
Length = 252
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 42/86 (48%), Positives = 58/86 (67%)
Query: 38 LEEFFENDRGPDDQKPVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQQQMLHAQN 97
LEEFF++ + ++K G SW +LR KS +DL+KLWYVLLKE+NML+T +Q Q
Sbjct: 66 LEEFFDDPKNWGEEKVKSGASWTCQQLRNKSNEDLHKLWYVLLKERNMLLTLEQEAKRQR 125
Query: 98 LKFPNPERIPKVRKSMCRIKQVLTER 123
L P+PER+ KV SM + +V+ ER
Sbjct: 126 LPMPSPERLEKVVDSMDNVDKVVQER 151
>UNIPROTKB|F1MNT0 [details] [associations]
symbol:MRPL47 "39S ribosomal protein L47, mitochondrial"
species:9913 "Bos taurus" [GO:0006412 "translation" evidence=IEA]
[GO:0005761 "mitochondrial ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR010729 Pfam:PF06984 GO:GO:0006412 GO:GO:0003735
GO:GO:0005761 PANTHER:PTHR21183 IPI:IPI00686711 UniGene:Bt.24917
OMA:KSGAPWT GeneTree:ENSGT00390000002837 EMBL:DAAA02001958
Ensembl:ENSBTAT00000003195 Uniprot:F1MNT0
Length = 252
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 42/86 (48%), Positives = 58/86 (67%)
Query: 38 LEEFFENDRGPDDQKPVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQQQMLHAQN 97
LEEFF++ + ++K G SW +LR KS +DL+KLWYVLLKE+NML+T +Q Q
Sbjct: 66 LEEFFDDPKNWGEEKVKSGASWTCQQLRNKSNEDLHKLWYVLLKERNMLLTLEQEAKRQR 125
Query: 98 LKFPNPERIPKVRKSMCRIKQVLTER 123
L P+PER+ KV SM + +V+ ER
Sbjct: 126 LPMPSPERLEKVVDSMDALDKVVQER 151
>UNIPROTKB|Q08DT6 [details] [associations]
symbol:MRPL47 "39S ribosomal protein L47, mitochondrial"
species:9913 "Bos taurus" [GO:0006412 "translation" evidence=IEA]
[GO:0005761 "mitochondrial ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR010729 Pfam:PF06984 GO:GO:0006412 GO:GO:0003735
GO:GO:0005761 PANTHER:PTHR21183 eggNOG:NOG116806 EMBL:BC123572
IPI:IPI00686711 RefSeq:NP_001070369.1 UniGene:Bt.24917 PRIDE:Q08DT6
GeneID:534317 KEGG:bta:534317 CTD:57129 HOGENOM:HOG000019703
HOVERGEN:HBG050019 InParanoid:Q08DT6 OrthoDB:EOG4ZKJNC
NextBio:20876352 Uniprot:Q08DT6
Length = 252
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 42/86 (48%), Positives = 58/86 (67%)
Query: 38 LEEFFENDRGPDDQKPVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQQQMLHAQN 97
LEEFF++ + ++K G SW +LR KS +DL+KLWYVLLKE+NML+T +Q Q
Sbjct: 66 LEEFFDDPKNWGEEKVKSGASWTCQQLRNKSNEDLHKLWYVLLKERNMLLTLEQEAKRQR 125
Query: 98 LKFPNPERIPKVRKSMCRIKQVLTER 123
L P+PER+ KV SM + +V+ ER
Sbjct: 126 LPMPSPERLEKVVDSMDALDKVVQER 151
>UNIPROTKB|E2QXX0 [details] [associations]
symbol:MRPL47 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005761 "mitochondrial ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR010729 Pfam:PF06984 GO:GO:0006412 GO:GO:0003735
GO:GO:0005761 PANTHER:PTHR21183 OMA:KSGAPWT
GeneTree:ENSGT00390000002837 EMBL:AAEX03017257
Ensembl:ENSCAFT00000018082 Uniprot:E2QXX0
Length = 252
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 42/86 (48%), Positives = 58/86 (67%)
Query: 38 LEEFFENDRGPDDQKPVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQQQMLHAQN 97
LEEFF++ + ++K G SW +LR KS +DL+KLWYVLLKE+NML+T +Q Q
Sbjct: 66 LEEFFDDPKNWGEEKVKSGASWTCQQLRNKSNEDLHKLWYVLLKERNMLLTLEQEAKRQR 125
Query: 98 LKFPNPERIPKVRKSMCRIKQVLTER 123
L P+PER+ KV SM + +V+ ER
Sbjct: 126 LPMPSPERLEKVIDSMDALDKVVQER 151
>RGD|1307531 [details] [associations]
symbol:Mrpl47 "mitochondrial ribosomal protein L47"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0005761 "mitochondrial ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR010729
Pfam:PF06984 RGD:1307531 GO:GO:0006412 GO:GO:0003735 EMBL:CH473961
GO:GO:0005761 PANTHER:PTHR21183 eggNOG:NOG116806 CTD:57129
HOGENOM:HOG000019703 HOVERGEN:HBG050019 OrthoDB:EOG4ZKJNC
OMA:KSGAPWT GeneTree:ENSGT00390000002837 EMBL:BC105820
IPI:IPI00372181 RefSeq:NP_001032260.1 UniGene:Rn.219103
Ensembl:ENSRNOT00000015864 GeneID:294963 KEGG:rno:294963
UCSC:RGD:1307531 InParanoid:Q3B8R7 NextBio:638787
Genevestigator:Q3B8R7 Uniprot:Q3B8R7
Length = 252
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 42/86 (48%), Positives = 58/86 (67%)
Query: 38 LEEFFENDRGPDDQKPVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQQQMLHAQN 97
LEEFF++ + ++K G SW +LR KS +DL+KLWYVLLKE+NML+T +Q Q
Sbjct: 66 LEEFFDDPKNWGEEKVKSGASWTCQQLRNKSNEDLHKLWYVLLKERNMLLTLEQEAKRQR 125
Query: 98 LKFPNPERIPKVRKSMCRIKQVLTER 123
L P+PER+ KV SM + +V+ ER
Sbjct: 126 LPMPSPERLEKVVDSMDALDKVVQER 151
>DICTYBASE|DDB_G0283823 [details] [associations]
symbol:DDB_G0283823 species:44689 "Dictyostelium
discoideum" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005761 "mitochondrial ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001854
InterPro:IPR010729 Pfam:PF06984 dictyBase:DDB_G0283823
GO:GO:0006412 GO:GO:0003735 EMBL:AAFI02000057 GO:GO:0005761
Gene3D:1.10.287.310 SUPFAM:SSF46561 PANTHER:PTHR21183
eggNOG:NOG116806 RefSeq:XP_638895.1 EnsemblProtists:DDB0185710
GeneID:8624292 KEGG:ddi:DDB_G0283823 InParanoid:Q54QH6 OMA:SFNDLHE
Uniprot:Q54QH6
Length = 199
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 43/86 (50%), Positives = 63/86 (73%)
Query: 38 LEEFFENDRGPDDQKPVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQQQMLHAQN 97
L++FFE+ P P+ GRSW AS+LR KS++DL++LW+ LLKE+N L+T++++ +N
Sbjct: 45 LKDFFEHTY-PIGTYPLAGRSWAASDLRGKSFNDLHELWFELLKERNKLLTEKEI--TKN 101
Query: 98 LKFPNPERIPKVRKSMCRIKQVLTER 123
+ NP+R+ KVRKSM IK VL ER
Sbjct: 102 NQLQNPQRVTKVRKSMAAIKVVLGER 127
>UNIPROTKB|F1P1G0 [details] [associations]
symbol:MRPL47 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005761 "mitochondrial ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR010729
Pfam:PF06984 GO:GO:0006412 GO:GO:0003735 GO:GO:0005761
PANTHER:PTHR21183 OMA:KSGAPWT GeneTree:ENSGT00390000002837
EMBL:AADN02020808 IPI:IPI00587208 Ensembl:ENSGALT00000022351
Uniprot:F1P1G0
Length = 215
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 43/88 (48%), Positives = 57/88 (64%)
Query: 38 LEEFFENDRGPDDQKPVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQQQMLHAQN 97
LEEFF++ + ++ G +W +LR KS DL+KLWYVLLKEKNML+T +Q Q
Sbjct: 31 LEEFFDDPKNWGEKTVKSGDAWNIKQLRAKSSQDLHKLWYVLLKEKNMLLTLEQESKRQQ 90
Query: 98 LKFPNPERIPKVRKSMCRIKQVLTERAI 125
P+PER+ KV+KSM I V+ ER I
Sbjct: 91 KPMPSPERLEKVQKSMKNIDLVVREREI 118
>UNIPROTKB|Q9HD33 [details] [associations]
symbol:MRPL47 "39S ribosomal protein L47, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005761 "mitochondrial ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR010729 Pfam:PF06984 GO:GO:0006412 EMBL:CH471052
GO:GO:0003735 GO:GO:0005761 EMBL:AC090425 PANTHER:PTHR21183
eggNOG:NOG116806 CTD:57129 HOGENOM:HOG000019703 HOVERGEN:HBG050019
OrthoDB:EOG4ZKJNC EMBL:BC021575 EMBL:BC032522 EMBL:AY212270
EMBL:AF285120 IPI:IPI00030820 IPI:IPI00375687 IPI:IPI00794978
RefSeq:NP_065142.2 RefSeq:NP_817125.1 UniGene:Hs.283734
ProteinModelPortal:Q9HD33 SMR:Q9HD33 IntAct:Q9HD33 STRING:Q9HD33
PhosphoSite:Q9HD33 DMDM:212276461 PaxDb:Q9HD33 PRIDE:Q9HD33
Ensembl:ENST00000259038 Ensembl:ENST00000392659
Ensembl:ENST00000476781 GeneID:57129 KEGG:hsa:57129 UCSC:uc003fjz.3
UCSC:uc003fkb.3 GeneCards:GC03M179306 HGNC:HGNC:16652 HPA:HPA037553
MIM:611852 neXtProt:NX_Q9HD33 PharmGKB:PA30979 InParanoid:Q9HD33
OMA:KSGAPWT PhylomeDB:Q9HD33 GenomeRNAi:57129 NextBio:63037
Bgee:Q9HD33 CleanEx:HS_MRPL47 Genevestigator:Q9HD33
GermOnline:ENSG00000136522 Uniprot:Q9HD33
Length = 250
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 41/86 (47%), Positives = 57/86 (66%)
Query: 38 LEEFFENDRGPDDQKPVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQQQMLHAQN 97
LEEFF++ + +K G +W +LR KS +DL+KLWYVLLKE+NML+T +Q Q
Sbjct: 64 LEEFFDDPKNWGQEKVKSGAAWTCQQLRNKSNEDLHKLWYVLLKERNMLLTLEQEAKRQR 123
Query: 98 LKFPNPERIPKVRKSMCRIKQVLTER 123
L P+PER+ KV SM + +V+ ER
Sbjct: 124 LPMPSPERLDKVVDSMDALDKVVQER 149
>WB|WBGene00015092 [details] [associations]
symbol:mrpl-47 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005761 "mitochondrial ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
InterPro:IPR010729 Pfam:PF06984 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0006412
GO:GO:0010171 GO:GO:0048477 GO:GO:0003735 GO:GO:0005761
PANTHER:PTHR21183 HOGENOM:HOG000019703 GeneTree:ENSGT00390000002837
EMBL:FO080142 UniGene:Cel.19301 GeneID:172164 KEGG:cel:CELE_B0261.4
UCSC:B0261.4a CTD:172164 NextBio:874283 RefSeq:NP_001040632.1
ProteinModelPortal:Q2L6V2 SMR:Q2L6V2 EnsemblMetazoa:B0261.4a
WormBase:B0261.4a InParanoid:Q2L6V2 OMA:CLKERNM ArrayExpress:Q2L6V2
Uniprot:Q2L6V2
Length = 234
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 41/90 (45%), Positives = 63/90 (70%)
Query: 38 LEEFFENDR--GPDDQKPVY--GRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQQQML 93
+++FF+++ G + +P + GRSW A ELRLKS DL+KLWYV LKE+NML+T ++
Sbjct: 45 MKQFFDDEANFGKAELRPKHRPGRSWTAEELRLKSNSDLHKLWYVCLKERNMLITMKKAH 104
Query: 94 HAQNLKFPNPERIPKVRKSMCRIKQVLTER 123
++ PNPER+ +V ++M RI+ V+ ER
Sbjct: 105 TSRARNMPNPERLDRVHETMDRIESVVHER 134
>UNIPROTKB|F1SGC7 [details] [associations]
symbol:MRPL47 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005761
"mitochondrial ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR010729
Pfam:PF06984 GO:GO:0006412 GO:GO:0003735 GO:GO:0005761
PANTHER:PTHR21183 OMA:KSGAPWT GeneTree:ENSGT00390000002837
EMBL:CU695053 Ensembl:ENSSSCT00000012874 Uniprot:F1SGC7
Length = 253
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 42/87 (48%), Positives = 58/87 (66%)
Query: 38 LEEFFENDRGPDDQK-PVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQQQMLHAQ 96
LEEFF++ + ++K G SW +LR KS +DL+KLWYVLLKE+NML+T +Q Q
Sbjct: 66 LEEFFDDPKNWGEEKVKSEGASWTCQQLRNKSNEDLHKLWYVLLKERNMLLTLEQEAKRQ 125
Query: 97 NLKFPNPERIPKVRKSMCRIKQVLTER 123
L P+PER+ KV SM + +V+ ER
Sbjct: 126 RLPMPSPERLEKVVDSMDALDKVVQER 152
>FB|FBgn0014023 [details] [associations]
symbol:mRpL47 "mitochondrial ribosomal protein L47"
species:7227 "Drosophila melanogaster" [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=ISS] [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR010729 Pfam:PF06984 EMBL:AE014297
GO:GO:0006412 GO:GO:0005762 GO:GO:0003735 PANTHER:PTHR21183
GeneTree:ENSGT00390000002837 FlyBase:FBgn0014023 EMBL:AY089479
RefSeq:NP_788610.1 UniGene:Dm.20784 SMR:Q8T3V6 STRING:Q8T3V6
EnsemblMetazoa:FBtr0082121 GeneID:41141 KEGG:dme:Dmel_CG9378
UCSC:CG9378-RB CTD:41141 InParanoid:Q8T3V6 OMA:LLTMEHE
GenomeRNAi:41141 NextBio:822381 Uniprot:Q8T3V6
Length = 271
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 37/86 (43%), Positives = 59/86 (68%)
Query: 38 LEEFFENDRGPDDQKPVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQQQMLHAQN 97
L EFF++ + + + GR+W+ ELR+KS +L++LW+VLLKE+NML+T + + +
Sbjct: 59 LMEFFDDKKNWSENEVKVGRAWRTEELRIKSNKELHQLWFVLLKERNMLLTMEHECNDKM 118
Query: 98 LKFPNPERIPKVRKSMCRIKQVLTER 123
FP+PERI KV+ SM ++ V+ ER
Sbjct: 119 EVFPSPERIDKVKISMENLETVVRER 144
>POMBASE|SPCC4G3.06c [details] [associations]
symbol:mrpl4 "mitochondrial ribosomal protein subunit L4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005762 "mitochondrial large
ribosomal subunit" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0032543 "mitochondrial translation" evidence=NAS]
InterPro:IPR010729 Pfam:PF06984 PomBase:SPCC4G3.06c EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0005762 GO:GO:0003735 GO:GO:0032543
PANTHER:PTHR21183 OrthoDB:EOG486CNK PIR:T41370 RefSeq:NP_587832.1
EnsemblFungi:SPCC4G3.06c.1 GeneID:2539502 KEGG:spo:SPCC4G3.06c
eggNOG:NOG116806 NextBio:20800664 Uniprot:P87232
Length = 144
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 39/92 (42%), Positives = 55/92 (59%)
Query: 36 NPLEEFFENDRG--PDDQKPVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQQQML 93
+PL FF + + P ++ +GR+W A ELR KS++DL+ LWY L+EKN+L TQ+ +
Sbjct: 36 HPLWNFFRDKQALPPPSEEAKFGRAWAAEELRWKSFNDLHGLWYNCLREKNLLFTQRAEM 95
Query: 94 HAQNLKFPNP--ERIPKVRKSMCRIKQVLTER 123
L P ER+ V K+M IK VL ER
Sbjct: 96 KRLQLTIPKASNERVLAVNKTMAAIKFVLWER 127
>ASPGD|ASPL0000003990 [details] [associations]
symbol:AN5897 species:162425 "Emericella nidulans"
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005761 "mitochondrial ribosome" evidence=IEA]
InterPro:IPR010729 Pfam:PF06984 GO:GO:0006412 EMBL:BN001301
GO:GO:0003735 EMBL:AACD01000101 GO:GO:0005761 eggNOG:NOG318758
PANTHER:PTHR21183 RefSeq:XP_663501.1 GeneID:2870709
KEGG:ani:AN5897.2 HOGENOM:HOG000048327 OrthoDB:EOG486CNK
Uniprot:Q5B0N3
Length = 219
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 35/89 (39%), Positives = 50/89 (56%)
Query: 41 FFENDRGP---DDQKPVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMT---QQQMLH 94
FF DR + +GRSW ELR KSW+DL+ LW+V LKEKN + T +++ L
Sbjct: 105 FFPKDRSALSTPEYDNAHGRSWSIQELREKSWEDLHSLWWVCLKEKNRIATSNLERKRLK 164
Query: 95 AQNLKFPNPERIPKVRKSMCRIKQVLTER 123
A ++ +R+ +R + IK VL ER
Sbjct: 165 AGYGEWEANQRLRTIRVTQLNIKHVLRER 193
>CGD|CAL0006009 [details] [associations]
symbol:orf19.6136 species:5476 "Candida albicans" [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IEA] [GO:0032543
"mitochondrial translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR010729
Pfam:PF06984 GO:GO:0006412 GO:GO:0003735 GO:GO:0005761
EMBL:AACQ01000160 EMBL:AACQ01000159 RefSeq:XP_712343.1
RefSeq:XP_712379.1 STRING:Q59RP7 GeneID:3646015 GeneID:3646057
KEGG:cal:CaO19.13555 KEGG:cal:CaO19.6136 eggNOG:NOG318758
PANTHER:PTHR21183 Uniprot:Q59RP7
Length = 309
Score = 138 (53.6 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 32/91 (35%), Positives = 57/91 (62%)
Query: 57 RSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQQQMLHAQNL----KFPNPERIPKVRKS 112
R W ++ELR KS++DL+K+WY+ LKE+N+L + ++ + + +F N +R K+ K+
Sbjct: 77 REWSSAELRQKSFEDLHKIWYLTLKERNILSREVRLGESLGMGDFRQFNNVDR--KLIKT 134
Query: 113 MCRIKQVLTER--AIEEPDPRRSAEMKRMIN 141
RIKQVL ER A+E ++++ ++
Sbjct: 135 QKRIKQVLLERQVAVERAQATMQDDIQKYLD 165
>SGD|S000004431 [details] [associations]
symbol:MRPL4 "Mitochondrial ribosomal protein of the large
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;IDA]
[GO:0005761 "mitochondrial ribosome" evidence=IEA] [GO:0032543
"mitochondrial translation" evidence=IC;IMP] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IDA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR010729 Pfam:PF06984
SGD:S000004431 EMBL:BK006945 GO:GO:0005762 GO:GO:0003735
GO:GO:0032543 EMBL:U21094 EMBL:Z30582 PANTHER:PTHR21183 PIR:S59407
RefSeq:NP_013544.1 ProteinModelPortal:P36517 SMR:P36517
DIP:DIP-940N IntAct:P36517 MINT:MINT-665264 STRING:P36517
PaxDb:P36517 PeptideAtlas:P36517 EnsemblFungi:YLR439W GeneID:851160
KEGG:sce:YLR439W CYGD:YLR439w eggNOG:NOG237629 HOGENOM:HOG000094497
OMA:ERNILAR OrthoDB:EOG415KPH NextBio:967951 Genevestigator:P36517
GermOnline:YLR439W Uniprot:P36517
Length = 319
Score = 131 (51.2 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 38/120 (31%), Positives = 62/120 (51%)
Query: 36 NPLEEFFEND---RGPDDQKPV-YGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQQQ 91
+PL +FF N R DD P + R W ELR KS++DL+ LWY L+E+N+L +
Sbjct: 66 HPLWQFFSNKKFIRSADDLPPSSHIRPWSIPELRHKSFNDLHSLWYNCLREQNVLARENH 125
Query: 92 MLHAQNLKFPNPERIPK----VRKSMCRIKQVLTERAIEEPDPRR----SAEMKRMINAL 143
+L +N+ + + +R +M +I+ VL ER + R +E K+ ++ L
Sbjct: 126 LL--KNIVGSTHDEFSELSNSIRTTMWQIRHVLNERELAYSASREFLQDESERKKFLDTL 183
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 143 122 0.00091 102 3 11 22 0.47 30
29 0.49 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 575 (61 KB)
Total size of DFA: 139 KB (2086 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.43u 0.13s 15.56t Elapsed: 00:00:01
Total cpu time: 15.43u 0.13s 15.56t Elapsed: 00:00:01
Start: Sat May 11 00:48:27 2013 End: Sat May 11 00:48:28 2013