Query 032303
Match_columns 143
No_of_seqs 151 out of 494
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 20:05:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032303.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032303hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3es4_A Uncharacterized protein 99.9 3.1E-27 1E-31 175.1 11.0 76 63-139 38-114 (116)
2 3myx_A Uncharacterized protein 99.9 1.2E-23 4.1E-28 171.8 10.9 87 50-137 146-237 (238)
3 3bcw_A Uncharacterized protein 99.9 1.1E-21 3.9E-26 144.6 8.6 88 50-138 28-120 (123)
4 1o5u_A Novel thermotoga mariti 99.8 1.1E-17 3.6E-22 119.2 12.7 86 51-137 15-100 (101)
5 2pyt_A Ethanolamine utilizatio 99.6 1.4E-14 4.9E-19 107.3 11.3 70 67-138 57-126 (133)
6 3myx_A Uncharacterized protein 99.6 1E-14 3.5E-19 119.0 10.7 67 70-139 50-117 (238)
7 4axo_A EUTQ, ethanolamine util 99.5 5.2E-13 1.8E-17 102.2 11.8 72 66-139 65-136 (151)
8 3lwc_A Uncharacterized protein 99.3 7.6E-11 2.6E-15 85.4 11.8 70 67-138 40-111 (119)
9 2i45_A Hypothetical protein; n 98.5 2.2E-07 7.5E-12 63.9 6.8 62 75-138 36-99 (107)
10 2oyz_A UPF0345 protein VPA0057 98.4 9.5E-07 3.3E-11 63.3 8.3 62 74-137 30-91 (94)
11 2pfw_A Cupin 2, conserved barr 98.2 1.5E-05 5.3E-10 54.6 10.1 64 70-135 37-102 (116)
12 3h8u_A Uncharacterized conserv 98.2 3.4E-06 1.2E-10 59.0 6.7 60 70-130 42-104 (125)
13 1yhf_A Hypothetical protein SP 98.2 1.8E-05 6.1E-10 54.2 10.1 66 71-139 44-111 (115)
14 2o8q_A Hypothetical protein; c 98.2 8.4E-06 2.9E-10 57.8 8.2 51 79-130 56-108 (134)
15 3d82_A Cupin 2, conserved barr 98.1 1.4E-05 4.8E-10 53.2 7.9 52 77-130 40-93 (102)
16 1vj2_A Novel manganese-contain 98.1 2.3E-05 8E-10 55.5 9.3 73 69-143 50-125 (126)
17 2q30_A Uncharacterized protein 98.1 1.9E-05 6.5E-10 53.3 8.4 64 68-132 34-101 (110)
18 3fjs_A Uncharacterized protein 98.1 2.5E-05 8.7E-10 54.9 9.1 62 72-135 41-104 (114)
19 2ozj_A Cupin 2, conserved barr 98.1 2.4E-05 8E-10 54.0 8.6 55 84-141 57-111 (114)
20 2opk_A Hypothetical protein; p 98.1 8.3E-06 2.8E-10 57.5 6.3 50 81-130 49-98 (112)
21 3l2h_A Putative sugar phosphat 98.1 1.4E-05 4.7E-10 58.8 7.6 57 69-127 48-109 (162)
22 4e2g_A Cupin 2 conserved barre 98.0 2E-05 6.8E-10 55.0 7.9 60 69-130 43-104 (126)
23 1juh_A Quercetin 2,3-dioxygena 98.0 1.3E-05 4.5E-10 67.0 8.1 56 82-138 269-324 (350)
24 1v70_A Probable antibiotics sy 98.0 2.6E-05 8.8E-10 51.5 7.9 57 71-129 32-91 (105)
25 2fqp_A Hypothetical protein BP 98.0 1.2E-05 4E-10 54.7 5.9 57 72-129 23-83 (97)
26 3ht1_A REMF protein; cupin fol 98.0 4.1E-05 1.4E-09 54.1 8.4 60 69-130 41-104 (145)
27 3ibm_A Cupin 2, conserved barr 98.0 7.9E-05 2.7E-09 56.1 10.4 59 69-129 58-118 (167)
28 1y9q_A Transcriptional regulat 97.9 5.1E-05 1.8E-09 57.0 9.1 67 71-141 108-180 (192)
29 1fi2_A Oxalate oxidase, germin 97.9 0.00016 5.4E-09 55.6 12.1 67 61-129 67-143 (201)
30 2gu9_A Tetracenomycin polyketi 97.9 5.9E-05 2E-09 50.7 8.2 59 69-129 23-86 (113)
31 2arc_A ARAC, arabinose operon 97.9 7.4E-05 2.5E-09 53.3 9.2 68 69-138 15-91 (164)
32 1zvf_A 3-hydroxyanthranilate 3 97.9 1.8E-05 6.1E-10 62.3 6.2 51 71-122 38-97 (176)
33 1yfu_A 3-hydroxyanthranilate-3 97.9 1.2E-05 4.1E-10 63.1 4.8 50 73-123 41-95 (174)
34 3kgz_A Cupin 2 conserved barre 97.9 0.00011 3.7E-09 55.2 9.7 72 68-141 45-120 (156)
35 3i7d_A Sugar phosphate isomera 97.9 6.5E-05 2.2E-09 56.2 8.5 57 69-127 45-107 (163)
36 2bnm_A Epoxidase; oxidoreducta 97.9 6.5E-05 2.2E-09 56.4 8.4 57 71-128 121-185 (198)
37 2b8m_A Hypothetical protein MJ 97.9 6.6E-05 2.3E-09 51.9 7.8 58 72-130 32-91 (117)
38 1o4t_A Putative oxalate decarb 97.8 9.6E-05 3.3E-09 53.0 8.7 59 70-130 60-121 (133)
39 1dgw_A Canavalin; duplicated s 97.8 5.5E-05 1.9E-09 57.5 7.1 60 69-128 43-106 (178)
40 3jzv_A Uncharacterized protein 97.8 0.00017 5.9E-09 54.6 9.6 61 68-130 54-116 (166)
41 2vpv_A Protein MIF2, MIF2P; nu 97.8 0.0001 3.4E-09 56.9 8.0 61 68-130 89-153 (166)
42 4e2q_A Ureidoglycine aminohydr 97.7 7.3E-05 2.5E-09 61.5 7.6 70 69-139 72-143 (266)
43 3rns_A Cupin 2 conserved barre 97.7 0.00022 7.7E-09 55.6 9.9 63 68-132 38-102 (227)
44 1sfn_A Conserved hypothetical 97.7 0.00014 4.9E-09 57.6 8.4 59 71-132 54-113 (246)
45 1lr5_A Auxin binding protein 1 97.7 0.00023 7.9E-09 52.3 8.9 58 71-129 45-112 (163)
46 4i4a_A Similar to unknown prot 97.7 0.00024 8.3E-09 49.4 8.5 54 73-128 40-95 (128)
47 3rns_A Cupin 2 conserved barre 97.7 0.00029 1E-08 55.0 9.8 65 68-134 154-221 (227)
48 4b29_A Dimethylsulfoniopropion 97.7 0.00039 1.3E-08 56.1 10.5 69 68-137 133-204 (217)
49 3eo6_A Protein of unknown func 97.6 0.00022 7.5E-09 52.0 7.9 57 74-130 43-99 (106)
50 1rc6_A Hypothetical protein YL 97.6 0.0002 6.9E-09 56.8 8.2 58 70-129 62-123 (261)
51 2f4p_A Hypothetical protein TM 97.6 0.00037 1.3E-08 51.0 9.0 70 69-139 50-122 (147)
52 1vr3_A Acireductone dioxygenas 97.6 0.0005 1.7E-08 54.2 10.3 52 79-130 97-152 (191)
53 3fz3_A Prunin; TREE NUT allerg 97.6 0.00053 1.8E-08 61.6 11.3 65 61-127 389-460 (531)
54 1uij_A Beta subunit of beta co 97.6 0.00025 8.4E-09 61.2 8.8 68 60-128 42-114 (416)
55 1y3t_A Hypothetical protein YX 97.6 0.00041 1.4E-08 55.7 9.5 60 69-130 48-110 (337)
56 3cew_A Uncharacterized cupin p 97.6 0.0013 4.5E-08 45.8 11.0 60 68-129 27-90 (125)
57 1sef_A Conserved hypothetical 97.6 0.00027 9.1E-09 56.7 8.3 58 70-129 65-126 (274)
58 3es1_A Cupin 2, conserved barr 97.6 0.00012 4.3E-09 56.5 6.0 67 68-136 80-150 (172)
59 2cav_A Protein (canavalin); vi 97.6 0.00069 2.4E-08 59.0 11.4 70 60-129 79-152 (445)
60 2ea7_A 7S globulin-1; beta bar 97.6 0.0017 5.7E-08 56.4 13.7 70 60-129 54-127 (434)
61 1sq4_A GLXB, glyoxylate-induce 97.5 0.00046 1.6E-08 56.0 9.2 68 68-137 69-142 (278)
62 2oa2_A BH2720 protein; 1017534 97.5 0.00029 9.9E-09 51.2 7.2 59 70-129 46-112 (148)
63 1x82_A Glucose-6-phosphate iso 97.5 0.00036 1.2E-08 53.4 7.9 61 68-129 68-143 (190)
64 3h7j_A Bacilysin biosynthesis 97.5 0.00045 1.5E-08 54.4 8.5 63 74-138 152-219 (243)
65 4h7l_A Uncharacterized protein 97.5 6.5E-05 2.2E-09 57.8 3.5 45 80-126 59-107 (157)
66 2vqa_A SLL1358 protein, MNCA; 97.5 0.00078 2.7E-08 55.1 10.0 60 70-129 55-120 (361)
67 1rc6_A Hypothetical protein YL 97.5 0.00061 2.1E-08 54.0 9.0 58 70-129 182-242 (261)
68 1y3t_A Hypothetical protein YX 97.4 0.00062 2.1E-08 54.6 9.0 49 80-130 232-282 (337)
69 1fxz_A Glycinin G1; proglycini 97.4 0.0004 1.4E-08 61.1 8.0 62 61-123 333-401 (476)
70 1j58_A YVRK protein; cupin, de 97.4 0.0014 4.7E-08 54.3 10.9 62 68-129 80-146 (385)
71 3c3v_A Arachin ARAH3 isoform; 97.4 0.00049 1.7E-08 61.3 8.6 62 61-123 367-435 (510)
72 2e9q_A 11S globulin subunit be 97.4 0.00031 1.1E-08 61.6 6.9 51 73-123 328-385 (459)
73 2qnk_A 3-hydroxyanthranilate 3 97.4 0.00016 5.3E-09 60.6 4.7 45 78-122 43-90 (286)
74 3h7j_A Bacilysin biosynthesis 97.4 0.0008 2.7E-08 52.9 8.6 60 69-130 36-98 (243)
75 1zrr_A E-2/E-2' protein; nicke 97.4 0.00019 6.7E-09 55.7 4.9 49 79-127 93-144 (179)
76 2d5f_A Glycinin A3B4 subunit; 97.4 0.00036 1.2E-08 61.7 7.1 62 61-123 362-430 (493)
77 1sef_A Conserved hypothetical 97.3 0.00064 2.2E-08 54.4 7.7 60 69-130 184-246 (274)
78 1juh_A Quercetin 2,3-dioxygena 97.3 0.00085 2.9E-08 56.0 8.5 56 81-137 65-126 (350)
79 2vqa_A SLL1358 protein, MNCA; 97.3 0.0011 3.7E-08 54.3 8.8 60 69-129 236-302 (361)
80 3d0j_A Uncharacterized protein 97.3 0.00028 9.4E-09 53.7 4.8 43 80-122 45-93 (140)
81 3ksc_A LEGA class, prolegumin; 97.3 0.00044 1.5E-08 61.4 6.5 49 75-123 366-421 (496)
82 2xlg_A SLL1785 protein, CUCA; 97.2 0.00026 8.8E-09 57.0 4.4 56 74-130 50-127 (239)
83 3kgl_A Cruciferin; 11S SEED gl 97.2 0.00062 2.1E-08 60.1 6.7 50 75-124 331-387 (466)
84 2ozi_A Hypothetical protein RP 97.1 0.00021 7.2E-09 49.9 2.6 52 71-122 21-76 (98)
85 3s7i_A Allergen ARA H 1, clone 97.1 0.0017 5.8E-08 56.3 8.7 58 70-127 47-108 (418)
86 3qac_A 11S globulin SEED stora 97.1 0.001 3.5E-08 58.6 7.4 52 75-127 331-389 (465)
87 3hqx_A UPF0345 protein aciad03 97.1 0.0035 1.2E-07 46.0 8.7 64 74-139 44-109 (111)
88 2d40_A Z3393, putative gentisa 97.0 0.0011 3.7E-08 55.7 6.3 60 68-128 101-162 (354)
89 3lag_A Uncharacterized protein 97.0 0.00027 9.3E-09 48.9 1.9 52 72-123 22-77 (98)
90 2phl_A Phaseolin; plant SEED s 97.0 0.0012 4.1E-08 56.9 6.3 55 75-129 247-314 (397)
91 1sfn_A Conserved hypothetical 96.9 0.0027 9.2E-08 50.2 7.7 45 84-130 185-229 (246)
92 1j58_A YVRK protein; cupin, de 96.9 0.0018 6.3E-08 53.6 6.9 59 70-128 260-324 (385)
93 1uij_A Beta subunit of beta co 96.9 0.0013 4.5E-08 56.6 6.1 58 73-130 255-332 (416)
94 2d40_A Z3393, putative gentisa 96.9 0.0032 1.1E-07 52.8 8.3 44 85-130 288-331 (354)
95 2phl_A Phaseolin; plant SEED s 96.9 0.0031 1.1E-07 54.3 8.0 70 60-129 45-124 (397)
96 2e9q_A 11S globulin subunit be 96.9 0.0059 2E-07 53.5 9.8 73 56-129 53-151 (459)
97 2ea7_A 7S globulin-1; beta bar 96.8 0.0015 5.2E-08 56.6 5.7 55 73-127 272-345 (434)
98 3bu7_A Gentisate 1,2-dioxygena 96.8 0.002 6.7E-08 55.6 6.0 59 68-127 124-184 (394)
99 3nw4_A Gentisate 1,2-dioxygena 96.7 0.002 6.9E-08 55.2 5.8 59 68-127 104-164 (368)
100 1fxz_A Glycinin G1; proglycini 96.7 0.032 1.1E-06 49.0 13.2 83 54-137 36-147 (476)
101 2cav_A Protein (canavalin); vi 96.7 0.0022 7.7E-08 55.8 5.8 51 73-123 287-354 (445)
102 2d5f_A Glycinin A3B4 subunit; 96.7 0.019 6.6E-07 50.7 11.7 73 56-129 35-137 (493)
103 3qac_A 11S globulin SEED stora 96.6 0.017 5.8E-07 50.9 11.0 80 56-137 40-164 (465)
104 1eyb_A Homogentisate 1,2-dioxy 96.5 0.013 4.6E-07 51.9 9.7 72 68-142 158-232 (471)
105 3bu7_A Gentisate 1,2-dioxygena 96.4 0.0044 1.5E-07 53.4 5.8 51 75-127 302-354 (394)
106 1sq4_A GLXB, glyoxylate-induce 96.2 0.0074 2.5E-07 48.8 5.6 64 72-137 196-264 (278)
107 3ksc_A LEGA class, prolegumin; 96.1 0.044 1.5E-06 48.6 10.9 71 56-128 36-132 (496)
108 2o1q_A Putative acetyl/propion 96.0 0.012 4E-07 43.2 5.7 51 72-124 49-103 (145)
109 3gbg_A TCP pilus virulence reg 96.0 0.026 9E-07 43.8 7.9 54 78-133 21-81 (276)
110 3nw4_A Gentisate 1,2-dioxygena 96.0 0.022 7.5E-07 48.8 7.8 44 85-130 299-342 (368)
111 4e2q_A Ureidoglycine aminohydr 95.9 0.012 4E-07 48.4 5.6 56 70-127 189-247 (266)
112 3s7i_A Allergen ARA H 1, clone 95.6 0.024 8.3E-07 49.0 6.9 70 60-130 257-357 (418)
113 3kgl_A Cruciferin; 11S SEED gl 95.6 0.095 3.2E-06 46.2 10.6 45 54-99 31-77 (466)
114 3c3v_A Arachin ARAH3 isoform; 95.5 0.16 5.6E-06 45.1 11.9 83 54-137 36-160 (510)
115 2y0o_A Probable D-lyxose ketol 95.5 0.054 1.9E-06 42.1 7.6 56 72-127 58-141 (175)
116 2qnk_A 3-hydroxyanthranilate 3 95.2 0.061 2.1E-06 45.0 7.7 64 71-136 211-275 (286)
117 3st7_A Capsular polysaccharide 94.7 0.048 1.6E-06 43.9 5.5 55 74-129 279-343 (369)
118 3cjx_A Protein of unknown func 94.4 0.096 3.3E-06 39.8 6.3 52 75-129 51-104 (165)
119 1qwr_A Mannose-6-phosphate iso 93.8 0.14 4.8E-06 42.4 6.7 43 85-130 269-311 (319)
120 2wfp_A Mannose-6-phosphate iso 93.5 0.45 1.6E-05 40.6 9.6 59 68-129 325-383 (394)
121 2q1z_B Anti-sigma factor CHRR, 93.4 0.082 2.8E-06 40.7 4.4 51 71-127 129-181 (195)
122 1pmi_A PMI, phosphomannose iso 92.8 0.32 1.1E-05 42.3 7.6 59 69-129 359-422 (440)
123 1zx5_A Mannosephosphate isomer 92.3 0.49 1.7E-05 38.9 7.8 42 84-129 246-288 (300)
124 3bpz_A Potassium/sodium hyperp 91.6 0.25 8.6E-06 36.3 4.9 59 55-115 82-142 (202)
125 3o14_A Anti-ecfsigma factor, C 91.5 0.27 9.1E-06 38.9 5.1 54 71-130 47-102 (223)
126 3ebr_A Uncharacterized RMLC-li 91.5 0.44 1.5E-05 35.7 6.1 53 72-128 47-101 (159)
127 2d93_A RAP guanine nucleotide 91.1 0.58 2E-05 31.7 6.0 60 54-115 25-87 (134)
128 2vec_A YHAK, pirin-like protei 88.6 1.2 4.2E-05 35.9 7.0 49 77-127 75-125 (256)
129 2vec_A YHAK, pirin-like protei 88.4 1.3 4.4E-05 35.8 7.0 43 87-130 204-246 (256)
130 2ptm_A Hyperpolarization-activ 88.3 0.71 2.4E-05 33.6 4.9 60 55-115 81-142 (198)
131 3bal_A Acetylacetone-cleaving 87.9 0.65 2.2E-05 35.1 4.6 54 71-125 50-106 (153)
132 3fz3_A Prunin; TREE NUT allerg 87.4 8.3 0.00028 34.5 12.1 44 55-99 37-82 (531)
133 3ocp_A PRKG1 protein; serine/t 87.0 0.97 3.3E-05 30.6 4.7 60 55-116 33-94 (139)
134 4gjz_A Lysine-specific demethy 85.0 0.48 1.6E-05 35.4 2.5 51 70-121 127-217 (235)
135 4f8a_A Potassium voltage-gated 84.9 1.6 5.6E-05 29.8 5.1 62 54-117 36-99 (160)
136 3pna_A CAMP-dependent protein 84.7 1.4 4.7E-05 30.6 4.7 60 54-115 47-108 (154)
137 3eqe_A Putative cystein deoxyg 84.0 7.4 0.00025 29.4 8.8 56 85-142 90-153 (171)
138 1tq5_A Protein YHHW; bicupin, 83.6 3.4 0.00012 32.9 7.0 51 77-129 52-104 (242)
139 2gm6_A Cysteine dioxygenase ty 82.3 5.9 0.0002 30.7 7.8 44 75-119 87-142 (208)
140 3of1_A CAMP-dependent protein 82.2 1.7 5.7E-05 31.9 4.4 59 56-116 18-78 (246)
141 3ukn_A Novel protein similar t 81.7 2.1 7.2E-05 31.3 4.8 65 51-117 81-147 (212)
142 2xdv_A MYC-induced nuclear ant 81.7 3.4 0.00012 35.8 6.8 52 70-122 142-216 (442)
143 2qjv_A Uncharacterized IOLB-li 81.5 11 0.00037 30.9 9.4 75 64-140 26-111 (270)
144 1yud_A Hypothetical protein SO 81.3 3.6 0.00012 31.6 6.1 38 84-122 68-116 (170)
145 2qdr_A Uncharacterized protein 79.7 4.2 0.00014 34.0 6.4 54 70-133 100-156 (303)
146 2yu1_A JMJC domain-containing 78.8 5.4 0.00018 34.8 7.1 56 71-130 200-288 (451)
147 1tq5_A Protein YHHW; bicupin, 78.4 5 0.00017 31.9 6.3 39 86-130 182-220 (242)
148 3of1_A CAMP-dependent protein 78.2 4.4 0.00015 29.6 5.6 41 75-115 154-196 (246)
149 1dgw_Y Canavalin; duplicated s 78.1 1.2 4E-05 31.2 2.2 21 107-127 8-28 (93)
150 3mdp_A Cyclic nucleotide-bindi 77.8 3.4 0.00011 27.5 4.5 62 54-116 15-85 (142)
151 1vp6_A CNBD, cyclic-nucleotide 77.5 2.5 8.7E-05 28.2 3.8 56 56-115 22-79 (138)
152 2oz6_A Virulence factor regula 77.0 4.6 0.00016 28.9 5.3 46 72-117 16-67 (207)
153 2qcs_B CAMP-dependent protein 76.6 3.5 0.00012 31.3 4.7 44 71-115 64-109 (291)
154 2pa7_A DTDP-6-deoxy-3,4-keto-h 75.6 9.4 0.00032 28.1 6.7 54 76-129 44-103 (141)
155 3dn7_A Cyclic nucleotide bindi 75.5 5.3 0.00018 28.3 5.3 61 55-116 17-83 (194)
156 3b02_A Transcriptional regulat 75.4 3.7 0.00013 29.5 4.4 32 85-116 17-52 (195)
157 3idb_B CAMP-dependent protein 75.4 5.2 0.00018 27.7 5.1 60 55-115 48-112 (161)
158 3shr_A CGMP-dependent protein 75.4 3.4 0.00012 31.7 4.4 42 74-116 67-110 (299)
159 2fmy_A COOA, carbon monoxide o 74.4 5.9 0.0002 28.8 5.3 47 71-117 29-80 (220)
160 1yll_A PA5104, conserved hypot 73.3 2.7 9.1E-05 32.9 3.4 35 86-121 141-175 (200)
161 3ryp_A Catabolite gene activat 72.9 6.6 0.00023 28.0 5.2 60 56-116 7-72 (210)
162 3esg_A HUTD, putative uncharac 72.3 5.8 0.0002 31.1 5.1 56 76-133 57-115 (193)
163 3bb6_A Uncharacterized protein 71.5 7.5 0.00025 28.7 5.3 43 85-127 39-87 (127)
164 3gyd_A CNMP-BD protein, cyclic 70.8 15 0.0005 26.4 6.8 62 53-115 47-114 (187)
165 2p17_A Pirin-like protein; GK1 70.6 13 0.00044 30.0 7.0 86 40-129 12-102 (277)
166 2p17_A Pirin-like protein; GK1 70.5 14 0.00047 29.8 7.1 31 86-120 189-220 (277)
167 1pcq_O Groes protein; chaperon 70.5 2.8 9.5E-05 29.6 2.6 25 101-125 50-75 (97)
168 2z69_A DNR protein; beta barre 69.3 5.5 0.00019 26.8 3.9 60 55-115 22-87 (154)
169 1ft9_A Carbon monoxide oxidati 69.2 7.1 0.00024 28.5 4.8 46 71-116 25-75 (222)
170 3iwz_A CAP-like, catabolite ac 68.1 8.2 0.00028 27.9 4.9 64 52-116 18-87 (230)
171 2pqq_A Putative transcriptiona 67.8 7.8 0.00027 25.8 4.4 61 55-116 15-81 (149)
172 3fx3_A Cyclic nucleotide-bindi 67.4 10 0.00034 27.8 5.3 62 54-116 20-87 (237)
173 3d0s_A Transcriptional regulat 66.8 8.5 0.00029 28.0 4.8 45 71-115 31-81 (227)
174 3kcc_A Catabolite gene activat 66.7 10 0.00034 28.7 5.3 61 55-116 56-122 (260)
175 1qwr_A Mannose-6-phosphate iso 66.5 11 0.00039 30.8 5.9 35 106-140 159-200 (319)
176 1zyb_A Transcription regulator 66.3 6.6 0.00023 29.0 4.1 61 55-115 28-95 (232)
177 3eln_A Cysteine dioxygenase ty 65.9 37 0.0013 26.0 8.5 65 75-142 78-159 (200)
178 3al5_A HTYW5, JMJC domain-cont 65.7 3.3 0.00011 34.0 2.5 58 70-131 170-263 (338)
179 1o7f_A CAMP-dependent RAP1 gua 65.6 10 0.00035 31.0 5.5 43 73-115 365-409 (469)
180 3uss_A Putative uncharacterize 65.6 22 0.00075 27.8 7.2 58 84-142 92-161 (211)
181 1vrb_A Putative asparaginyl hy 65.6 4.3 0.00015 33.6 3.2 51 71-122 145-235 (342)
182 3d8c_A Hypoxia-inducible facto 64.9 3.4 0.00012 34.2 2.5 57 71-131 187-284 (349)
183 4diq_A Lysine-specific demethy 64.8 16 0.00054 32.4 6.8 53 70-122 167-245 (489)
184 1wgp_A Probable cyclic nucleot 64.7 2.3 7.7E-05 28.5 1.1 60 55-115 16-82 (137)
185 4ev0_A Transcription regulator 64.4 11 0.00038 26.9 4.9 60 56-116 10-75 (216)
186 3dv8_A Transcriptional regulat 64.1 11 0.00037 27.1 4.9 60 55-115 13-78 (220)
187 2zcw_A TTHA1359, transcription 64.0 7.8 0.00027 27.8 4.0 31 86-116 26-60 (202)
188 2qcs_B CAMP-dependent protein 63.7 14 0.00049 27.8 5.7 44 73-116 184-234 (291)
189 3kv5_D JMJC domain-containing 62.9 13 0.00043 32.7 5.8 63 71-137 270-365 (488)
190 3ejk_A DTDP sugar isomerase; Y 62.6 32 0.0011 26.1 7.4 56 75-130 61-131 (174)
191 1o5l_A Transcriptional regulat 61.1 9.2 0.00031 27.8 4.0 45 71-115 24-74 (213)
192 3la7_A Global nitrogen regulat 61.0 13 0.00043 27.7 4.9 64 53-116 25-96 (243)
193 2gau_A Transcriptional regulat 59.7 13 0.00046 27.0 4.7 59 56-115 21-85 (232)
194 2bgc_A PRFA; bacterial infecti 59.1 14 0.00049 27.2 4.9 47 72-118 21-72 (238)
195 1dgw_X Canavalin; duplicated s 57.9 8.4 0.00029 25.6 3.0 20 81-100 53-72 (79)
196 1j1l_A Pirin; beta sandwich, c 55.7 38 0.0013 27.5 7.2 83 43-129 15-104 (290)
197 4f7z_A RAP guanine nucleotide 55.3 17 0.00058 33.5 5.5 62 53-115 345-409 (999)
198 3k3o_A PHF8, PHD finger protei 55.3 8 0.00028 33.0 3.2 59 71-133 151-242 (371)
199 3e6c_C CPRK, cyclic nucleotide 55.1 17 0.00057 27.0 4.6 59 57-116 21-85 (250)
200 3e97_A Transcriptional regulat 54.8 12 0.0004 27.3 3.6 61 55-116 16-82 (231)
201 3kv4_A PHD finger protein 8; e 53.5 8.8 0.0003 33.5 3.2 58 71-132 235-325 (447)
202 3shr_A CGMP-dependent protein 52.1 26 0.0009 26.6 5.4 58 57-115 169-233 (299)
203 1ywk_A 4-deoxy-L-threo-5-hexos 51.5 12 0.0004 31.2 3.5 55 83-139 76-134 (289)
204 3k2o_A Bifunctional arginine d 51.4 8 0.00027 32.2 2.5 50 71-121 176-272 (336)
205 3kv9_A JMJC domain-containing 51.3 27 0.00093 30.0 5.8 62 71-136 179-273 (397)
206 3pua_A GRC5, PHD finger protei 51.2 10 0.00035 32.6 3.2 60 71-134 178-270 (392)
207 1xru_A 4-deoxy-L-threo-5-hexos 49.2 13 0.00046 30.7 3.5 56 82-139 75-134 (282)
208 4ava_A Lysine acetyltransferas 49.1 19 0.00066 27.9 4.3 61 54-115 22-87 (333)
209 1yll_A PA5104, conserved hypot 48.8 17 0.00057 28.3 3.8 54 76-132 52-109 (200)
210 4din_B CAMP-dependent protein 48.0 8.2 0.00028 31.5 2.0 42 73-115 157-200 (381)
211 1o7f_A CAMP-dependent RAP1 gua 47.6 22 0.00075 29.0 4.5 61 55-116 52-120 (469)
212 3o14_A Anti-ecfsigma factor, C 47.4 88 0.003 24.2 7.9 36 85-127 166-201 (223)
213 3pur_A Lysine-specific demethy 46.1 24 0.00084 31.5 4.9 25 107-134 368-392 (528)
214 1zx5_A Mannosephosphate isomer 43.7 11 0.00037 30.7 2.1 16 106-121 159-174 (300)
215 3anw_A GINS51, putative unchar 42.0 8.3 0.00028 29.5 1.1 32 87-119 137-169 (188)
216 2qjv_A Uncharacterized IOLB-li 41.3 59 0.002 26.5 6.2 37 87-123 186-230 (270)
217 3dkw_A DNR protein; CRP-FNR, H 41.0 18 0.00062 26.0 2.8 62 54-116 18-85 (227)
218 1g31_A GP31; chaperone, CO-cha 40.6 9.6 0.00033 27.4 1.2 28 93-121 48-75 (111)
219 1j1l_A Pirin; beta sandwich, c 40.4 29 0.001 28.2 4.2 36 85-122 190-225 (290)
220 2k1g_A Lipoprotein SPR; soluti 39.9 5.9 0.0002 28.9 -0.1 14 108-121 67-80 (135)
221 3cf6_E RAP guanine nucleotide 39.3 44 0.0015 30.0 5.5 62 54-115 41-104 (694)
222 2wfp_A Mannose-6-phosphate iso 36.8 20 0.00067 30.4 2.7 17 106-122 241-257 (394)
223 3tnp_B CAMP-dependent protein 36.7 56 0.0019 26.9 5.4 43 73-115 172-219 (416)
224 4din_B CAMP-dependent protein 36.3 47 0.0016 26.8 4.9 31 85-115 289-324 (381)
225 3dl3_A Tellurite resistance pr 36.2 1.2E+02 0.0041 21.8 8.8 45 87-131 40-90 (119)
226 3tnp_B CAMP-dependent protein 36.0 56 0.0019 26.9 5.3 44 72-115 293-348 (416)
227 1we3_O CPN10(groes); chaperoni 35.6 8.5 0.00029 27.2 0.2 23 101-124 55-78 (100)
228 3dkq_A PKHD-type hydroxylase S 35.3 43 0.0015 26.5 4.3 41 94-137 147-189 (243)
229 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 35.1 47 0.0016 25.7 4.4 56 75-130 68-134 (197)
230 3nx6_A 10KDA chaperonin; bacte 31.4 24 0.00082 24.5 2.0 32 92-124 36-73 (95)
231 2hbp_A Cytoskeleton assembly c 31.3 89 0.0031 20.6 4.7 36 70-109 6-41 (68)
232 2ixk_A DTDP-4-dehydrorhamnose 31.1 1.7E+02 0.0058 22.1 7.1 55 76-130 58-128 (184)
233 1oi6_A PCZA361.16; epimerase, 30.7 1.5E+02 0.005 23.0 6.6 56 75-130 55-127 (205)
234 2ypd_A Probable JMJC domain-co 30.6 28 0.00095 30.1 2.6 17 107-123 295-311 (392)
235 2e9x_D GINS complex subunit 4; 30.6 45 0.0015 25.9 3.7 24 94-118 180-207 (223)
236 3e8v_A Possible transglutamina 30.5 80 0.0027 21.4 4.5 37 83-122 25-63 (82)
237 4f7z_A RAP guanine nucleotide 29.7 69 0.0024 29.4 5.3 64 51-115 48-119 (999)
238 3kmh_A D-lyxose isomerase; cup 29.5 1.1E+02 0.0038 24.8 5.9 42 86-129 155-196 (246)
239 1wlt_A 176AA long hypothetical 29.4 1.4E+02 0.0049 22.9 6.4 55 76-130 74-145 (196)
240 1pmi_A PMI, phosphomannose iso 28.8 32 0.0011 29.7 2.7 16 106-121 267-282 (440)
241 1p3h_A 10 kDa chaperonin; beta 28.4 13 0.00043 26.2 0.1 17 107-124 60-76 (99)
242 1dzr_A DTDP-4-dehydrorhamnose 27.5 1.5E+02 0.0051 22.4 6.1 56 76-131 56-128 (183)
243 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 27.3 2E+02 0.0069 21.7 7.4 55 76-130 57-127 (185)
244 1upi_A DTDP-4-dehydrorhamnose 26.3 2.1E+02 0.0073 22.5 7.0 56 75-130 74-146 (225)
245 2jyx_A Lipoprotein SPR; soluti 26.1 17 0.00057 26.0 0.4 13 108-120 67-79 (136)
246 3tbm_A Putative uncharacterize 25.6 40 0.0014 22.2 2.2 16 90-105 18-33 (69)
247 1zx8_A Hypothetical protein TM 24.3 37 0.0012 25.0 2.0 72 36-121 11-85 (136)
248 3jxo_A TRKA-N domain protein; 23.8 57 0.002 20.5 2.7 27 88-117 43-69 (86)
249 3ryk_A DTDP-4-dehydrorhamnose 22.7 2.7E+02 0.0092 21.5 7.7 56 75-130 78-150 (205)
250 1iwl_A P20, outer-membrane lip 22.2 1.2E+02 0.004 21.4 4.4 35 68-102 36-72 (182)
251 3beh_A MLL3241 protein; transm 22.0 19 0.00065 28.8 0.0 40 73-115 255-296 (355)
252 1itw_A Isocitrate dehydrogenas 21.1 85 0.0029 29.0 4.0 25 93-117 432-458 (741)
253 1xe7_A YML079WP, hypothetical 20.9 3E+02 0.01 21.4 7.1 39 83-121 98-145 (203)
254 2b0t_A NADP isocitrate dehydro 20.7 86 0.0029 29.0 4.0 25 93-117 428-454 (738)
255 2w7q_A Outer-membrane lipoprot 20.1 2.5E+02 0.0085 20.3 5.9 38 68-105 56-95 (204)
No 1
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=3.1e-27 Score=175.09 Aligned_cols=76 Identities=9% Similarity=0.094 Sum_probs=71.5
Q ss_pred hcCCCceeeeeecCceeeeeeccc-eEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecceEEEEEEEe
Q 032303 63 ELDVSRWSMWKTGKCKLPWDWQVD-QLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGPYQERYSFRA 139 (143)
Q Consensus 63 ~lGv~~wgiWec~pg~f~~~y~~d-E~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~vrK~Y~~~a 139 (143)
..|...+|+|+|+||+|+|+|+.+ |+||||||+++|+++||++ ++|+|||+|+||+|++|+|+|++++||+|++..
T Consensus 38 ~~g~~~~GvWe~tPG~~~~~~~~~~E~~~iLeG~~~lt~ddG~~-~~l~aGD~~~~P~G~~gtWev~e~vrK~~~~~~ 114 (116)
T 3es4_A 38 VENGTIVAVWMAEPGIYNYAGRDLEETFVVVEGEALYSQADADP-VKIGPGSIVSIAKGVPSRLEILSSFRKLATVIP 114 (116)
T ss_dssp SSSCCEEEEEEECSEEEEECCCSEEEEEEEEECCEEEEETTCCC-EEECTTEEEEECTTCCEEEEECSCEEEEEEEEE
T ss_pred CCCCEEEEEEecCCceeECeeCCCcEEEEEEEeEEEEEeCCCeE-EEECCCCEEEECCCCeEEEEEeEEEeEEEEEec
Confidence 357789999999999999999976 9999999999999999998 899999999999999999999999999999864
No 2
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=99.90 E-value=1.2e-23 Score=171.79 Aligned_cols=87 Identities=13% Similarity=0.193 Sum_probs=75.9
Q ss_pred eEEecCCCHHHHhhc----CCCceeeeeecCce-eeeeeccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEE
Q 032303 50 VRVERQVSPERLKEL----DVSRWSMWKTGKCK-LPWDWQVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEAD 124 (143)
Q Consensus 50 I~ve~~ps~~rl~~l----Gv~~wgiWec~pg~-f~~~y~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gt 124 (143)
..|+++|.......+ |..+||+|+|+||+ +.|.|+.+|+||||||+++|++++|+. ++|+|||+++||+|++|+
T Consensus 146 ~~l~G~P~~~~~~~~~~~~g~~~~GiW~~tpG~~~~~~~~~~E~~~ILeG~v~lt~~~G~~-~~~~aGD~~~~P~G~~~t 224 (238)
T 3myx_A 146 IMISPLPQCRSNNLFEDTASTLRIGVWDSTPYERISRPHKIHELMNLIEGRVVLSLENGSS-LTVNTGDTVFVAQGAPCK 224 (238)
T ss_dssp GBSSCCCCEEEEEEEECSSSSCEEEEEEECCEEBCCEECSSCEEEEEEECCEEEEETTSCE-EEECTTCEEEECTTCEEE
T ss_pred heecCCchheeeEEEECCCCCEEEeEEEeCCCEEECCcCCCCEEEEEEEeEEEEEeCCCCE-EEECCCCEEEECCCCEEE
Confidence 456777665444322 66799999999987 467789999999999999999999998 899999999999999999
Q ss_pred EEEecceEEEEEE
Q 032303 125 LFFNGPYQERYSF 137 (143)
Q Consensus 125 W~V~e~vrK~Y~~ 137 (143)
|+|++++||+|++
T Consensus 225 Wev~e~vrK~Yvi 237 (238)
T 3myx_A 225 WTSTGYVRKFYAV 237 (238)
T ss_dssp EEESSCEEEEEEE
T ss_pred EEECccEEEEEEe
Confidence 9999999999997
No 3
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=99.85 E-value=1.1e-21 Score=144.57 Aligned_cols=88 Identities=15% Similarity=0.144 Sum_probs=79.3
Q ss_pred eEEecCCCHHHHh----hcCCCceeeeeecCceeeeeecc-ceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEE
Q 032303 50 VRVERQVSPERLK----ELDVSRWSMWKTGKCKLPWDWQV-DQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEAD 124 (143)
Q Consensus 50 I~ve~~ps~~rl~----~lGv~~wgiWec~pg~f~~~y~~-dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gt 124 (143)
+.|+++|....+. +.|...+++|+|+||.|.|+++. +|+||||||+++|+.++|++ ++++|||.++||+|..++
T Consensus 28 ~~i~G~P~~~~~~~~~~~~g~~~~g~w~~~pG~~~~~~~~~~E~~~Vl~G~~~l~~~~g~~-~~l~~GD~~~ip~g~~h~ 106 (123)
T 3bcw_A 28 RPIAGDASFRTVTAFEGGQGKVESGVWESTSGSFQSNTTGYIEYCHIIEGEARLVDPDGTV-HAVKAGDAFIMPEGYTGR 106 (123)
T ss_dssp SEEEECCCEEEEEEEEETTTTEEEEEEEEEEEEEECCCTTEEEEEEEEEEEEEEECTTCCE-EEEETTCEEEECTTCCCE
T ss_pred cEEcCCCCeeEEEEEeCCCCCEEEEEEEECCCceeeEcCCCcEEEEEEEEEEEEEECCCeE-EEECCCCEEEECCCCeEE
Confidence 5677887766662 44777999999999999999988 99999999999999988888 899999999999999999
Q ss_pred EEEecceEEEEEEE
Q 032303 125 LFFNGPYQERYSFR 138 (143)
Q Consensus 125 W~V~e~vrK~Y~~~ 138 (143)
|++.+++||+|++.
T Consensus 107 ~~~~~~~rK~yv~~ 120 (123)
T 3bcw_A 107 WEVDRHVKKIYFVT 120 (123)
T ss_dssp EEEEEEEEEEEEEE
T ss_pred EEECCceeEEEEEE
Confidence 99999999999984
No 4
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=99.76 E-value=1.1e-17 Score=119.24 Aligned_cols=86 Identities=28% Similarity=0.619 Sum_probs=81.3
Q ss_pred EEecCCCHHHHhhcCCCceeeeeecCceeeeeeccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecc
Q 032303 51 RVERQVSPERLKELDVSRWSMWKTGKCKLPWDWQVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 51 ~ve~~ps~~rl~~lGv~~wgiWec~pg~f~~~y~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
.++++...+.|.+.|...+++|+++||.++|+.+.+|++|||+|+++++.++|+. ..++|||+++||+|..-.|...++
T Consensus 15 ~~~~~~~~~~l~~~g~~~~~~~~~~pg~~~~hH~~~E~~~Vl~G~~~~~i~~g~~-~~l~~GD~i~ip~g~~H~~~n~~~ 93 (101)
T 1o5u_A 15 VKIEKPTPEKLKELSVEKWPIWEKEVSEFDWYYDTNETCYILEGKVEVTTEDGKK-YVIEKGDLVTFPKGLRCRWKVLEP 93 (101)
T ss_dssp CEEECCCHHHHHHHTGGGSCEEEECSEEEEEECSSCEEEEEEEEEEEEEETTCCE-EEEETTCEEEECTTCEEEEEEEEE
T ss_pred EEecCCCccEEeeCCceEEEEEEeCCCcccccCCceEEEEEEeCEEEEEECCCCE-EEECCCCEEEECCCCcEEEEeCCC
Confidence 4678999999999999999999999999999988999999999999999986777 799999999999999999999999
Q ss_pred eEEEEEE
Q 032303 131 YQERYSF 137 (143)
Q Consensus 131 vrK~Y~~ 137 (143)
++|+|+|
T Consensus 94 ~~~~yv~ 100 (101)
T 1o5u_A 94 VRKHYNL 100 (101)
T ss_dssp EEEEEEE
T ss_pred eeEEEEE
Confidence 9999997
No 5
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=99.58 E-value=1.4e-14 Score=107.33 Aligned_cols=70 Identities=21% Similarity=0.242 Sum_probs=65.0
Q ss_pred CceeeeeecCceeeeeeccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecceEEEEEEE
Q 032303 67 SRWSMWKTGKCKLPWDWQVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGPYQERYSFR 138 (143)
Q Consensus 67 ~~wgiWec~pg~f~~~y~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~vrK~Y~~~ 138 (143)
...++|.++||.++|+++.+|++|||||+++|+.+ |+. ++++|||+++||+|...+|+..+++|+.|++.
T Consensus 57 ~~~~~~~~~pG~~~~h~~~~E~~~VLeG~~~l~~~-g~~-~~l~~GD~i~~p~g~~h~~~~~~~~~~l~v~~ 126 (133)
T 2pyt_A 57 MAAGFMQWDNAFFPWTLNYDEIDMVLEGELHVRHE-GET-MIAKAGDVMFIPKGSSIEFGTPTSVRFLYVAW 126 (133)
T ss_dssp SEEEEEEEEEEEEEEECSSEEEEEEEEEEEEEEET-TEE-EEEETTCEEEECTTCEEEEEEEEEEEEEEEEE
T ss_pred EEEEEEEECCCCccccCCCCEEEEEEECEEEEEEC-CEE-EEECCCcEEEECCCCEEEEEeCCCEEEEEEEc
Confidence 45789999999999999999999999999999997 666 79999999999999999999999999999874
No 6
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=99.57 E-value=1e-14 Score=119.02 Aligned_cols=67 Identities=7% Similarity=0.115 Sum_probs=56.2
Q ss_pred eeeeecCceeee-eeccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecceEEEEEEEe
Q 032303 70 SMWKTGKCKLPW-DWQVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGPYQERYSFRA 139 (143)
Q Consensus 70 giWec~pg~f~~-~y~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~vrK~Y~~~a 139 (143)
|+|.+ .|++.. .|+.||+||||||+++|++ +|++ ++++|||+++||+|++++|++++++||+|+.-+
T Consensus 50 G~~~~-~g~~~v~~~p~dE~~~VleG~~~lt~-~g~~-~~~~~Gd~~~ip~G~~~~w~~~~~~~~~y~~~~ 117 (238)
T 3myx_A 50 GIVEF-GTALSVEAYPYTEMLVMHRGSVTLTS-GTDS-VTLSTGESAVIGRGTQVRIDAQPESLWAFCAST 117 (238)
T ss_dssp EEEEE-CSEEEESSCSSEEEEEEEESEEEEEE-TTEE-EEEETTCEEEECTTCCEEEEECTTEEEEEEEEC
T ss_pred EEEEe-ccccccccCCCcEEEEEEEeEEEEEC-CCeE-EEEcCCCEEEECCCCEEEEEecCCeEEEEEecc
Confidence 34444 444433 4556899999999999999 7887 899999999999999999999999999998754
No 7
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=99.47 E-value=5.2e-13 Score=102.24 Aligned_cols=72 Identities=15% Similarity=0.252 Sum_probs=65.7
Q ss_pred CCceeeeeecCceeeeeeccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecceEEEEEEEe
Q 032303 66 VSRWSMWKTGKCKLPWDWQVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGPYQERYSFRA 139 (143)
Q Consensus 66 v~~wgiWec~pg~f~~~y~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~vrK~Y~~~a 139 (143)
..+.++|.++.+.|+|+++.+|++|||||+++|+. +|+. +.++|||+++||+|...+|+..++.++.|++..
T Consensus 65 ~~s~g~~~~e~~~~~~~~~~eE~~yVLeG~~~l~i-~g~~-~~l~~GD~i~iP~G~~h~~~n~~~a~~l~V~~P 136 (151)
T 4axo_A 65 RLGCGMMEMKETTFDWTLNYDEIDYVIDGTLDIII-DGRK-VSASSGELIFIPKGSKIQFSVPDYARFIYVTYP 136 (151)
T ss_dssp SCEEEEEEEEEEEEEEECSSEEEEEEEEEEEEEEE-TTEE-EEEETTCEEEECTTCEEEEEEEEEEEEEEEEEC
T ss_pred cEEEEEEEEcCccccEeCCCcEEEEEEEeEEEEEE-CCEE-EEEcCCCEEEECCCCEEEEEeCCCEEEEEEECC
Confidence 35678999998999999999999999999999998 5666 799999999999999999999999999999864
No 8
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.26 E-value=7.6e-11 Score=85.44 Aligned_cols=70 Identities=14% Similarity=0.121 Sum_probs=61.6
Q ss_pred CceeeeeecCce-eeeeeccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEe-cceEEEEEEE
Q 032303 67 SRWSMWKTGKCK-LPWDWQVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFN-GPYQERYSFR 138 (143)
Q Consensus 67 ~~wgiWec~pg~-f~~~y~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~-e~vrK~Y~~~ 138 (143)
.+.+.|..+||. ++|+++.+|++|||||+++|+. +|+. ++++|||.++||+|..-.|... ++.++.|++.
T Consensus 40 ~~~~~~~~~pG~~~~~H~~~~E~~~Vl~G~~~~~~-~g~~-~~l~~GD~v~ip~g~~H~~~~~~~~~~~l~v~~ 111 (119)
T 3lwc_A 40 ITIGYGRYAPGQSLTETMAVDDVMIVLEGRLSVST-DGET-VTAGPGEIVYMPKGETVTIRSHEEGALTAYVTY 111 (119)
T ss_dssp CEEEEEEECTTCEEEEECSSEEEEEEEEEEEEEEE-TTEE-EEECTTCEEEECTTCEEEEEEEEEEEEEEEEEE
T ss_pred EEEEEEEECCCCCcCccCCCCEEEEEEeCEEEEEE-CCEE-EEECCCCEEEECCCCEEEEEcCCCCeEEEEEEC
Confidence 466889999994 6888889999999999999999 5666 7999999999999999999988 7788888764
No 9
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=98.53 E-value=2.2e-07 Score=63.86 Aligned_cols=62 Identities=15% Similarity=0.156 Sum_probs=48.6
Q ss_pred cCceeeeeec-c-ceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecceEEEEEEE
Q 032303 75 GKCKLPWDWQ-V-DQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGPYQERYSFR 138 (143)
Q Consensus 75 ~pg~f~~~y~-~-dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~vrK~Y~~~ 138 (143)
.||.++|+++ . +|++|||+|+++++.++++. ..++|||+++||+|..=.+...++. +...|.
T Consensus 36 ~~g~~~~H~H~~~~E~~~Vl~G~~~~~~~~~~~-~~l~~Gd~~~ip~~~~H~~~~~~~~-~~l~i~ 99 (107)
T 2i45_A 36 LLGDYGWHTHGYSDKVLFAVEGDMAVDFADGGS-MTIREGEMAVVPKSVSHRPRSENGC-SLVLIE 99 (107)
T ss_dssp EEEECCCBCC--CCEEEEESSSCEEEEETTSCE-EEECTTEEEEECTTCCEEEEEEEEE-EEEEEE
T ss_pred CCCCCcceeCCCCCEEEEEEeCEEEEEECCCcE-EEECCCCEEEECCCCcEeeEeCCCe-EEEEEE
Confidence 4566666765 4 89999999999999988555 7999999999999999888886654 333443
No 10
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=98.44 E-value=9.5e-07 Score=63.29 Aligned_cols=62 Identities=11% Similarity=0.116 Sum_probs=55.7
Q ss_pred ecCceeeeeeccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecceEEEEEE
Q 032303 74 TGKCKLPWDWQVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGPYQERYSF 137 (143)
Q Consensus 74 c~pg~f~~~y~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~vrK~Y~~ 137 (143)
+.||.|.......|++.|++|+.+|..+|.+...+|.|||.|.+|++.+-.|+|.+++ .|..
T Consensus 30 m~pGeytF~T~~~E~M~vvsG~~~V~lpg~~ew~~~~aGesF~Vpans~F~l~v~~~~--~YlC 91 (94)
T 2oyz_A 30 MLPGEYTFGTQAPERMTVVKGALVVKRVGEADWTTYSSGESFDVEGNSSFELQVKDAT--AYLC 91 (94)
T ss_dssp ECSEEEEEEESSCEEEEEEESEEEEEETTCSSCEEEETTCEEEECSSEEEEEEESSCE--EEEE
T ss_pred EeceEEEEcCCCeEEEEEEEeEEEEEcCCCCcCEEECCCCEEEECCCCEEEEEEcccE--eEEE
Confidence 6899999999999999999999999999886558999999999999999999999875 4554
No 11
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=98.22 E-value=1.5e-05 Score=54.65 Aligned_cols=64 Identities=19% Similarity=0.022 Sum_probs=50.3
Q ss_pred eeeeecCce-eeeeec-cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecceEEEE
Q 032303 70 SMWKTGKCK-LPWDWQ-VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGPYQERY 135 (143)
Q Consensus 70 giWec~pg~-f~~~y~-~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~vrK~Y 135 (143)
..+.-.||. .+++.+ ..|++|||+|+++++.++ +. ..++|||++++|+|..=.+...++.+-..
T Consensus 37 ~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~-~~-~~l~~Gd~~~ip~~~~H~~~~~~~~~~l~ 102 (116)
T 2pfw_A 37 VKIWFDKGAEGYVHAHRHSQVSYVVEGEFHVNVDG-VI-KVLTAGDSFFVPPHVDHGAVCPTGGILID 102 (116)
T ss_dssp EEEEECTTEEEEEECCSSEEEEEEEEECEEEEETT-EE-EEECTTCEEEECTTCCEEEEESSCEEEEE
T ss_pred EEEEECCCCcCCcEECCcceEEEEEeeEEEEEECC-EE-EEeCCCCEEEECcCCceeeEeCCCcEEEE
Confidence 345556665 456655 689999999999999854 45 79999999999999999998888764333
No 12
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=98.20 E-value=3.4e-06 Score=58.99 Aligned_cols=60 Identities=13% Similarity=0.125 Sum_probs=47.3
Q ss_pred eeeeecCce-eeeeec--cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecc
Q 032303 70 SMWKTGKCK-LPWDWQ--VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 70 giWec~pg~-f~~~y~--~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
-.+.-.||. .+++++ .+|++|||+|+++++.++|+. ..+++||++++|+|..=.+.....
T Consensus 42 ~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~~~~-~~l~~Gd~~~i~~~~~H~~~n~~~ 104 (125)
T 3h8u_A 42 VVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQGNGIV-THLKAGDIAIAKPGQVHGAMNSGP 104 (125)
T ss_dssp EEEEECTTCEECCC-CTTCEEEEEEEECEEEEECSTTCE-EEEETTEEEEECTTCCCEEEECSS
T ss_pred EEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEECCCeE-EEeCCCCEEEECCCCEEEeEeCCC
Confidence 346666665 456665 479999999999999867776 799999999999999888877543
No 13
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=98.20 E-value=1.8e-05 Score=54.25 Aligned_cols=66 Identities=17% Similarity=0.198 Sum_probs=50.0
Q ss_pred eeeecCce-eeeeec-cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecceEEEEEEEe
Q 032303 71 MWKTGKCK-LPWDWQ-VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGPYQERYSFRA 139 (143)
Q Consensus 71 iWec~pg~-f~~~y~-~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~vrK~Y~~~a 139 (143)
...-.||. ++++.+ ..|++|||+|++++..++ +. ..+++||++++|+|..=.+...++.+ .+.+..
T Consensus 44 ~~~~~~g~~~~~H~H~~~e~~~vl~G~~~~~~~~-~~-~~l~~Gd~~~ip~~~~H~~~~~~~~~-~~~v~~ 111 (115)
T 1yhf_A 44 VFSLDKGQEIGRHSSPGDAMVTILSGLAEITIDQ-ET-YRVAEGQTIVMPAGIPHALYAVEAFQ-MLLVVV 111 (115)
T ss_dssp EEEECTTCEEEEECCSSEEEEEEEESEEEEEETT-EE-EEEETTCEEEECTTSCEEEEESSCEE-EEEEEE
T ss_pred EEEECCCCccCCEECCCcEEEEEEeCEEEEEECC-EE-EEECCCCEEEECCCCCEEEEECCCce-EEEEEE
Confidence 34445553 456654 689999999999999865 44 79999999999999999998887643 344433
No 14
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=98.17 E-value=8.4e-06 Score=57.76 Aligned_cols=51 Identities=22% Similarity=0.169 Sum_probs=43.0
Q ss_pred eeeeec-c-ceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecc
Q 032303 79 LPWDWQ-V-DQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 79 f~~~y~-~-dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
++|+++ . +|++|||+|++++..+|++. ..++|||+++||+|..=.+.....
T Consensus 56 ~~~H~H~~~~E~~~vl~G~~~~~~~~~~~-~~l~~Gd~~~ip~g~~H~~~~~~~ 108 (134)
T 2o8q_A 56 PTWHTHTVGFQLFYVLRGWVEFEYEDIGA-VMLEAGGSAFQPPGVRHRELRHSD 108 (134)
T ss_dssp CCCEEECCSCEEEEEEESEEEEEETTTEE-EEEETTCEEECCTTCCEEEEEECT
T ss_pred CCCEECCCCcEEEEEEeCEEEEEECCcEE-EEecCCCEEEECCCCcEEeEeCCC
Confidence 456665 3 89999999999999988666 799999999999999888877443
No 15
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=98.11 E-value=1.4e-05 Score=53.24 Aligned_cols=52 Identities=17% Similarity=0.331 Sum_probs=42.7
Q ss_pred ceeeeeec-c-ceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecc
Q 032303 77 CKLPWDWQ-V-DQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 77 g~f~~~y~-~-dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
+.++++++ . .|++||++|++++..++.. ..+++||++++|+|..=.+...+.
T Consensus 40 ~~~~~H~H~~~~e~~~v~~G~~~~~~~~~~--~~l~~Gd~~~ip~~~~H~~~~~~~ 93 (102)
T 3d82_A 40 GEFVWHEHADTDEVFIVMEGTLQIAFRDQN--ITLQAGEMYVIPKGVEHKPMAKEE 93 (102)
T ss_dssp EECCCBCCTTCCEEEEEEESEEEEECSSCE--EEEETTEEEEECTTCCBEEEEEEE
T ss_pred CCCCceeCCCCcEEEEEEeCEEEEEECCEE--EEEcCCCEEEECCCCeEeeEcCCC
Confidence 45666765 4 8999999999999987654 689999999999999887777643
No 16
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=98.10 E-value=2.3e-05 Score=55.49 Aligned_cols=73 Identities=8% Similarity=0.001 Sum_probs=53.3
Q ss_pred eeeeeecCce-eeeeec-cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecc-eEEEEEEEeccCC
Q 032303 69 WSMWKTGKCK-LPWDWQ-VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGP-YQERYSFRAYGDD 143 (143)
Q Consensus 69 wgiWec~pg~-f~~~y~-~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~-vrK~Y~~~a~~~~ 143 (143)
...+.-.||. +++++. ..|++|||+|++++..++. . ..+++||++++|+|..=.+..... --+.+.+...++|
T Consensus 50 ~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i~~~-~-~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~v~~~~~~ 125 (126)
T 1vj2_A 50 MRLFTVEPGGLIDRHSHPWEHEIFVLKGKLTVLKEQG-E-ETVEEGFYIFVEPNEIHGFRNDTDSEVEFLCLIPKEGG 125 (126)
T ss_dssp EEEEEEEEEEEEEEECCSSCEEEEEEESEEEEECSSC-E-EEEETTEEEEECTTCCEEEECCSSSCEEEEEEEEGGGC
T ss_pred EEEEEECCCCcCCceeCCCcEEEEEEEeEEEEEECCE-E-EEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEccCCC
Confidence 3445556654 466665 6899999999999998755 4 699999999999999888876543 2344555555543
No 17
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=98.09 E-value=1.9e-05 Score=53.27 Aligned_cols=64 Identities=16% Similarity=0.143 Sum_probs=50.1
Q ss_pred ceeeeeecCce-eeeeecc--ceE-EEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecceE
Q 032303 68 RWSMWKTGKCK-LPWDWQV--DQL-VYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGPYQ 132 (143)
Q Consensus 68 ~wgiWec~pg~-f~~~y~~--dE~-~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~vr 132 (143)
....+.-.||. ++++++. .|+ +|||+|++++..++|+. ..+++||++++|+|..=.+...+..+
T Consensus 34 ~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~~~~~-~~l~~Gd~~~ip~~~~H~~~~~~~~~ 101 (110)
T 2q30_A 34 KIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGDGDAV-IPAPRGAVLVAPISTPHGVRAVTDMK 101 (110)
T ss_dssp EEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECGGGCE-EEECTTEEEEEETTSCEEEEESSSEE
T ss_pred EEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEeCCCEE-EEECCCCEEEeCCCCcEEEEEcCCcE
Confidence 34455666664 4667654 587 79999999999875666 79999999999999998888877753
No 18
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=98.08 E-value=2.5e-05 Score=54.88 Aligned_cols=62 Identities=18% Similarity=0.036 Sum_probs=47.4
Q ss_pred eeecCce-eeeeec-cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecceEEEE
Q 032303 72 WKTGKCK-LPWDWQ-VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGPYQERY 135 (143)
Q Consensus 72 Wec~pg~-f~~~y~-~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~vrK~Y 135 (143)
+.-.||. .+++.+ .+|++|||+|+++++.++. . ..+++||+++||+|..=.+...++.+=..
T Consensus 41 ~~l~~G~~~~~H~H~~~e~~~Vl~G~~~~~i~~~-~-~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~ 104 (114)
T 3fjs_A 41 MVLPAGKQVGSHSVAGPSTIQCLEGEVEIGVDGA-Q-RRLHQGDLLYLGAGAAHDVNAITNTSLLV 104 (114)
T ss_dssp EEECTTCEEEEECCSSCEEEEEEESCEEEEETTE-E-EEECTTEEEEECTTCCEEEEESSSEEEEE
T ss_pred EEECCCCccCceeCCCcEEEEEEECEEEEEECCE-E-EEECCCCEEEECCCCcEEEEeCCCcEEEE
Confidence 3444444 345544 5799999999999998655 4 79999999999999999988877754333
No 19
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=98.07 E-value=2.4e-05 Score=53.95 Aligned_cols=55 Identities=16% Similarity=0.228 Sum_probs=43.7
Q ss_pred ccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecceEEEEEEEecc
Q 032303 84 QVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGPYQERYSFRAYG 141 (143)
Q Consensus 84 ~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~vrK~Y~~~a~~ 141 (143)
+.+|++|||+|+++++.++ +. ..++|||+++||+|..=.+...++. +.+.+..++
T Consensus 57 ~~~e~~~vl~G~~~~~i~~-~~-~~l~~Gd~i~i~~~~~H~~~~~~~~-~~~~i~~~~ 111 (114)
T 2ozj_A 57 FGDTLYLILQGEAVITFDD-QK-IDLVPEDVLMVPAHKIHAIAGKGRF-KMLQITLID 111 (114)
T ss_dssp SSCEEEEEEEEEEEEEETT-EE-EEECTTCEEEECTTCCBEEEEEEEE-EEEEEEECC
T ss_pred CCCeEEEEEeCEEEEEECC-EE-EEecCCCEEEECCCCcEEEEeCCCc-EEEEEEEcc
Confidence 4689999999999999865 45 7999999999999998888877654 344444443
No 20
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=98.06 E-value=8.3e-06 Score=57.47 Aligned_cols=50 Identities=18% Similarity=0.275 Sum_probs=42.2
Q ss_pred eeeccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecc
Q 032303 81 WDWQVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 81 ~~y~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
++.+.+|+.+||+|+++++.++..+...++|||.++||+|..=.|.-.+.
T Consensus 49 ~~~~~~E~~~Vl~G~~~l~~~~~~~~~~l~~Gd~i~ipa~~~H~~~n~~~ 98 (112)
T 2opk_A 49 YDSPQDEWVMVVSGSAGIECEGDTAPRVMRPGDWLHVPAHCRHRVAWTDG 98 (112)
T ss_dssp BCCSSEEEEEEEESCEEEEETTCSSCEEECTTEEEEECTTCCEEEEEECS
T ss_pred ccCCccEEEEEEeCeEEEEECCEEEEEEECCCCEEEECCCCcEEEEeCCC
Confidence 34567999999999999999887622589999999999999988877664
No 21
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=98.06 E-value=1.4e-05 Score=58.76 Aligned_cols=57 Identities=14% Similarity=0.256 Sum_probs=45.3
Q ss_pred eeeeeecCce--eeeeec--cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCC-CEEEEEE
Q 032303 69 WSMWKTGKCK--LPWDWQ--VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKW-FEADLFF 127 (143)
Q Consensus 69 wgiWec~pg~--f~~~y~--~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG-~~gtW~V 127 (143)
...+.-.||. .+++++ .+|++|||+|+++++.++. . .+++|||+++||+| ..=.|.-
T Consensus 48 ~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~~~~-~-~~l~~Gd~i~i~~~~~~H~~~n 109 (162)
T 3l2h_A 48 IHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTMEND-Q-YPIAPGDFVGFPCHAAAHSISN 109 (162)
T ss_dssp EEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEETTE-E-EEECTTCEEEECTTSCCEEEEC
T ss_pred EEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEECCE-E-EEeCCCCEEEECCCCceEEeEe
Confidence 3446667876 466665 6999999999999998754 4 79999999999998 7766665
No 22
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=98.04 E-value=2e-05 Score=54.97 Aligned_cols=60 Identities=10% Similarity=-0.025 Sum_probs=48.4
Q ss_pred eeeeeecCce-eeeeec-cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecc
Q 032303 69 WSMWKTGKCK-LPWDWQ-VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 69 wgiWec~pg~-f~~~y~-~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
...+.-.||. .+++.+ ..|++|||+|+++++.++. . ..+++||++++|+|..=.+...+.
T Consensus 43 ~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~~-~-~~l~~Gd~~~ip~~~~H~~~~~~~ 104 (126)
T 4e2g_A 43 LNWVRIEPNTEMPAHEHPHEQAGVMLEGTLELTIGEE-T-RVLRPGMAYTIPGGVRHRARTFED 104 (126)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEECEEEEETTE-E-EEECTTEEEEECTTCCEEEECCTT
T ss_pred EEEEEECCCCcCCCccCCCceEEEEEEeEEEEEECCE-E-EEeCCCCEEEECCCCcEEeEECCC
Confidence 3455666665 466665 5899999999999999664 4 799999999999999888887766
No 23
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.04 E-value=1.3e-05 Score=66.99 Aligned_cols=56 Identities=14% Similarity=0.129 Sum_probs=49.5
Q ss_pred eeccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecceEEEEEEE
Q 032303 82 DWQVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGPYQERYSFR 138 (143)
Q Consensus 82 ~y~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~vrK~Y~~~ 138 (143)
+.+.+|++|||||+++|+.+|.+. .+++|||.+++|+|..=.+...+..++.+.+.
T Consensus 269 ~~~~~~~~~vleG~~~i~i~g~~~-~~l~~Gd~~~iPag~~h~~~~~~~~~~~l~~~ 324 (350)
T 1juh_A 269 SFPGACAFQVQEGRVVVQIGDYAA-TELGSGDVAFIPGGVEFKYYSEAYFSKVLFVS 324 (350)
T ss_dssp CCSSCEEEEEEESCEEEEETTSCC-EEECTTCEEEECTTCCEEEEESSSSEEEEEEE
T ss_pred cCCCcEEEEEEeeEEEEEECCeEE-EEeCCCCEEEECCCCCEEEEecCCeEEEEEEe
Confidence 356899999999999999987466 79999999999999999999988887777664
No 24
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=98.03 E-value=2.6e-05 Score=51.46 Aligned_cols=57 Identities=16% Similarity=0.062 Sum_probs=44.6
Q ss_pred eeeecCce-eeeeec--cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEec
Q 032303 71 MWKTGKCK-LPWDWQ--VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNG 129 (143)
Q Consensus 71 iWec~pg~-f~~~y~--~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e 129 (143)
...-.||. ++++++ .+|++|||+|++++..++ +. ..+++||++++|+|..=.+...+
T Consensus 32 ~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~~~-~~-~~l~~Gd~~~ip~~~~H~~~~~~ 91 (105)
T 1v70_A 32 LYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVGE-EE-ALLAPGMAAFAPAGAPHGVRNES 91 (105)
T ss_dssp EEEECTTCEEEEECCSSCEEEEEEEESCEEEEETT-EE-EEECTTCEEEECTTSCEEEECCS
T ss_pred EEEECCCCcCCccCCCCCcEEEEEEeCEEEEEECC-EE-EEeCCCCEEEECCCCcEEeEeCC
Confidence 44445553 456664 368999999999999875 44 79999999999999988887654
No 25
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=98.00 E-value=1.2e-05 Score=54.65 Aligned_cols=57 Identities=12% Similarity=0.184 Sum_probs=43.8
Q ss_pred eeecCce-eeeeecc--ceEEEEEEeEEEEEeCCC-eeeEEEcCCcEEEEcCCCEEEEEEec
Q 032303 72 WKTGKCK-LPWDWQV--DQLVYIEEGEVRVVPEGS-QRYMRFLAGDLIRYPKWFEADLFFNG 129 (143)
Q Consensus 72 Wec~pg~-f~~~y~~--dE~~yILEG~V~vt~d~G-~~~~e~~AGDlv~fPkG~~gtW~V~e 129 (143)
+.-.||. .+|+.+. +|+.|||+|+++++.+|| +. ..++|||+++||+|..=.+.-..
T Consensus 23 ~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~g~~~-~~l~~Gd~~~~p~~~~H~~~N~g 83 (97)
T 2fqp_A 23 WRFPPGGETGWHRHSMDYVVVPMTTGPLLLETPEGSVT-SQLTRGVSYTRPEGVEHNVINPS 83 (97)
T ss_dssp EEECTTCBCCSEECCSCEEEEESSCEEEEEEETTEEEE-EEECTTCCEEECTTCEEEEECCS
T ss_pred EEECCCCCCCCEECCCCcEEEEEeecEEEEEeCCCCEE-EEEcCCCEEEeCCCCcccCEeCC
Confidence 4444443 3355543 469999999999999987 56 79999999999999887776544
No 26
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=97.96 E-value=4.1e-05 Score=54.15 Aligned_cols=60 Identities=15% Similarity=0.239 Sum_probs=47.1
Q ss_pred eeeeeecCce-eeeeec-cceEEEEEEeEEEEE--eCCCeeeEEEcCCcEEEEcCCCEEEEEEecc
Q 032303 69 WSMWKTGKCK-LPWDWQ-VDQLVYIEEGEVRVV--PEGSQRYMRFLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 69 wgiWec~pg~-f~~~y~-~dE~~yILEG~V~vt--~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
...+...||. ++++++ ..|++|||+|++++. .++ +. ..++|||++++|+|..=.+...+.
T Consensus 41 ~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~~~-~~-~~l~~Gd~~~ip~~~~H~~~~~~~ 104 (145)
T 3ht1_A 41 LTEFEVSPNGSTPPHFHEWEHEIYVLEGSMGLVLPDQG-RT-EEVGPGEAIFIPRGEPHGFVTGPG 104 (145)
T ss_dssp EEEEEEEEEEECCCEECSSCEEEEEEEECEEEEEGGGT-EE-EEECTTCEEEECTTCCBEEECCTT
T ss_pred EEEEEECCCCcCCCccCCCceEEEEEEeEEEEEEeECC-EE-EEECCCCEEEECCCCeEEeEcCCC
Confidence 3455666765 366765 678899999999999 654 55 799999999999999988887544
No 27
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=97.95 E-value=7.9e-05 Score=56.09 Aligned_cols=59 Identities=10% Similarity=0.081 Sum_probs=47.0
Q ss_pred eeeeeecCcee-eeeec-cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEec
Q 032303 69 WSMWKTGKCKL-PWDWQ-VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNG 129 (143)
Q Consensus 69 wgiWec~pg~f-~~~y~-~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e 129 (143)
...+.-.||.. +++++ ..|++|||+|+++++.++. . ..+++||+++||+|..=.|....
T Consensus 58 ~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~i~~~-~-~~l~~Gd~i~ip~~~~H~~~n~~ 118 (167)
T 3ibm_A 58 TRYFEVEPGGYTTLERHEHTHVVMVVRGHAEVVLDDR-V-EPLTPLDCVYIAPHAWHQIHATG 118 (167)
T ss_dssp EEEEEECTTCBCCCBBCSSCEEEEEEESEEEEEETTE-E-EEECTTCEEEECTTCCEEEEEES
T ss_pred EEEEEECCCCCCCCccCCCcEEEEEEeCEEEEEECCE-E-EEECCCCEEEECCCCcEEEEeCC
Confidence 34566667653 44443 7999999999999998765 4 79999999999999998888765
No 28
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=97.94 E-value=5.1e-05 Score=56.97 Aligned_cols=67 Identities=15% Similarity=-0.015 Sum_probs=50.3
Q ss_pred eeeecCcee-e--eeec-cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecc--eEEEEEEEecc
Q 032303 71 MWKTGKCKL-P--WDWQ-VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGP--YQERYSFRAYG 141 (143)
Q Consensus 71 iWec~pg~f-~--~~y~-~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~--vrK~Y~~~a~~ 141 (143)
.+.-.||.. + ++.+ .+|++|||+|+++++.+ ++. ..+++||+++||+|..=.|..... . .+.+..++
T Consensus 108 ~~~~~pg~~~~~~~H~h~~~E~~~Vl~G~~~~~~~-~~~-~~l~~GD~i~i~~~~~H~~~n~~~~~~--~l~v~~~~ 180 (192)
T 1y9q_A 108 EITLLDHHQQMSSPHALGVIEYIHVLEGIMKVFFD-EQW-HELQQGEHIRFFSDQPHGYAAVTEKAV--FQNIVAYP 180 (192)
T ss_dssp EEEECTTCEEEECCCSTTCEEEEEEEESCEEEEET-TEE-EEECTTCEEEEECSSSEEEEESSSCEE--EEEEEECC
T ss_pred EEEECCCCCccCCCCCCCCEEEEEEEEeEEEEEEC-CEE-EEeCCCCEEEEcCCCCeEeECCCCCcE--EEEEEecC
Confidence 345566653 2 4544 58999999999999986 555 799999999999999988888643 4 55555554
No 29
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=97.94 E-value=0.00016 Score=55.63 Aligned_cols=67 Identities=18% Similarity=0.121 Sum_probs=48.9
Q ss_pred HhhcCCCceeeeeecCcee-eeeecc--ceEEEEEEeEEEEEeCC-----Ce--eeEEEcCCcEEEEcCCCEEEEEEec
Q 032303 61 LKELDVSRWSMWKTGKCKL-PWDWQV--DQLVYIEEGEVRVVPEG-----SQ--RYMRFLAGDLIRYPKWFEADLFFNG 129 (143)
Q Consensus 61 l~~lGv~~wgiWec~pg~f-~~~y~~--dE~~yILEG~V~vt~d~-----G~--~~~e~~AGDlv~fPkG~~gtW~V~e 129 (143)
+..+|+ +.....-.||.. ++|++. +|++|||+|+++++..+ ++ . ..+++||+++||+|..=.+.-..
T Consensus 67 l~~~~~-~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~-~~l~~GD~~~iP~g~~H~~~N~g 143 (201)
T 1fi2_A 67 TNTLGV-SMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYS-RVVRAGETFVIPRGLMHFQFNVG 143 (201)
T ss_dssp GTTSSC-EEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEE-EEEETTCEEEECTTCCEEEEECS
T ss_pred cccCce-EEEEEEECCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEE-EEECCCCEEEECCCCeEEEEeCC
Confidence 444454 344556667654 677764 69999999999997743 33 4 79999999999999987776543
No 30
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=97.92 E-value=5.9e-05 Score=50.75 Aligned_cols=59 Identities=15% Similarity=0.173 Sum_probs=45.6
Q ss_pred eeeeeecCce-eeee--ec--cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEec
Q 032303 69 WSMWKTGKCK-LPWD--WQ--VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNG 129 (143)
Q Consensus 69 wgiWec~pg~-f~~~--y~--~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e 129 (143)
...+...||. .+++ ++ ..|++|||+|+++++.++ +. ..+++||++++|+|..=.+...+
T Consensus 23 ~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~~~-~~-~~l~~Gd~~~i~~~~~H~~~~~~ 86 (113)
T 2gu9_A 23 AAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVDG-HT-QALQAGSLIAIERGQAHEIRNTG 86 (113)
T ss_dssp EEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEETT-EE-EEECTTEEEEECTTCCEEEECCS
T ss_pred EEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEECC-EE-EEeCCCCEEEECCCCcEEeEcCC
Confidence 3445556665 3455 43 589999999999999865 44 79999999999999988887654
No 31
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=97.92 E-value=7.4e-05 Score=53.29 Aligned_cols=68 Identities=10% Similarity=-0.106 Sum_probs=50.4
Q ss_pred eeeeeecCcee---ee----eeccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEec--ceEEEEEEE
Q 032303 69 WSMWKTGKCKL---PW----DWQVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNG--PYQERYSFR 138 (143)
Q Consensus 69 wgiWec~pg~f---~~----~y~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e--~vrK~Y~~~ 138 (143)
+|.+.|.|+.- .. ..+.-|++||++|++++..++. . ..++|||++++|+|..-.+.... .--+.+.+.
T Consensus 15 ~G~~~~~~~~~~~~~~~~p~~h~~~~i~~v~~G~~~~~i~~~-~-~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~~i~ 91 (164)
T 2arc_A 15 AGLTPIEANGYLDFFIDRPLGMKGYILNLTIRGQGVVKNQGR-E-FVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVY 91 (164)
T ss_dssp EEEEEEETTSTTCSCEEETTCCSSEEEEEEEEECEEEEETTE-E-EEECTTCEEEECTTCCEEEEECTTSSEEEEEEEE
T ss_pred hcceeeccCCchhhhhccccCCCceEEEEEEEeEEEEEECCE-E-EEecCCeEEEEcCCCCEEEEeCCCCCcEEEEEEE
Confidence 67888888543 11 2346799999999999998654 4 69999999999999988888754 223444443
No 32
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=97.91 E-value=1.8e-05 Score=62.26 Aligned_cols=51 Identities=14% Similarity=0.160 Sum_probs=43.3
Q ss_pred eeeecCce-eeeeec-cceEEEEEEeEEEEEeCC-C------eeeEEEcCCcEEEEcCCCE
Q 032303 71 MWKTGKCK-LPWDWQ-VDQLVYIEEGEVRVVPEG-S------QRYMRFLAGDLIRYPKWFE 122 (143)
Q Consensus 71 iWec~pg~-f~~~y~-~dE~~yILEG~V~vt~d~-G------~~~~e~~AGDlv~fPkG~~ 122 (143)
.|-.+|+. ++||.+ .+|++|+|+|+..|...| | .. +.+++||.+.+|+|..
T Consensus 38 ~~vgGPn~r~D~H~~~~eE~Fy~lkG~m~l~v~d~g~~~~~~~d-v~i~eGdmfllP~gvp 97 (176)
T 1zvf_A 38 MIVGGPNERTDYHINPTPEWFYQKKGSMLLKVVDETDAEPKFID-IIINEGDSYLLPGNVP 97 (176)
T ss_dssp EEECSSBCCSCEEECSSCEEEEEEESCEEEEEEECSSSSCEEEE-EEECTTEEEEECTTCC
T ss_pred EEEcCCCcCCcCcCCCCceEEEEEeCEEEEEEEcCCCcccceee-EEECCCCEEEcCCCCC
Confidence 46667766 899976 699999999999999876 5 24 8999999999999976
No 33
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=97.88 E-value=1.2e-05 Score=63.12 Aligned_cols=50 Identities=14% Similarity=0.233 Sum_probs=40.5
Q ss_pred eecC-ceeeeeec-cceEEEEEEeEEEEEeCC-C--eeeEEEcCCcEEEEcCCCEE
Q 032303 73 KTGK-CKLPWDWQ-VDQLVYIEEGEVRVVPEG-S--QRYMRFLAGDLIRYPKWFEA 123 (143)
Q Consensus 73 ec~p-g~f~~~y~-~dE~~yILEG~V~vt~d~-G--~~~~e~~AGDlv~fPkG~~g 123 (143)
-..| ..|+||.+ .+|++|+|+|+..|...| | .. +++++||.+++|+|..=
T Consensus 41 v~Gpn~r~d~H~h~~dE~FyvlkG~m~i~v~d~g~~~~-v~l~eGE~f~lP~gvpH 95 (174)
T 1yfu_A 41 VGGPNHRTDYHDDPLEEFFYQLRGNAYLNLWVDGRRER-ADLKEGDIFLLPPHVRH 95 (174)
T ss_dssp ECSCBCCCCEEECSSCEEEEEEESCEEEEEEETTEEEE-EEECTTCEEEECTTCCE
T ss_pred EcCCCcCccCcCCCCceEEEEEeeEEEEEEEcCCceee-EEECCCCEEEeCCCCCc
Confidence 3344 34788876 699999999999999876 4 24 89999999999999864
No 34
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=97.87 E-value=0.00011 Score=55.16 Aligned_cols=72 Identities=14% Similarity=0.102 Sum_probs=51.8
Q ss_pred ceeeeeecCcee-eeeec-cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEec--ceEEEEEEEecc
Q 032303 68 RWSMWKTGKCKL-PWDWQ-VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNG--PYQERYSFRAYG 141 (143)
Q Consensus 68 ~wgiWec~pg~f-~~~y~-~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e--~vrK~Y~~~a~~ 141 (143)
....+.-.||.. +++++ ..|++|||+|+++++.++ +. ..+++||+++||+|..=.+.... +++=.+.+...+
T Consensus 45 ~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~v~v~g-~~-~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i~~~~~ 120 (156)
T 3kgz_A 45 EWRYFEVDEGGYSTLERHAHVHAVMIHRGHGQCLVGE-TI-SDVAQGDLVFIPPMTWHQFRANRGDCLGFLCVVNAAR 120 (156)
T ss_dssp EEEEEEEEEEEECCCBBCSSCEEEEEEEEEEEEEETT-EE-EEEETTCEEEECTTCCEEEECCSSSCEEEEEEEESSC
T ss_pred EEEEEEECCCCccCceeCCCcEEEEEEeCEEEEEECC-EE-EEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEeCCC
Confidence 344566677764 45544 689999999999999865 45 79999999999999988877643 354444444333
No 35
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=97.87 E-value=6.5e-05 Score=56.16 Aligned_cols=57 Identities=14% Similarity=0.232 Sum_probs=44.6
Q ss_pred eeeeeecCcee--eeeec--cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCC--CEEEEEE
Q 032303 69 WSMWKTGKCKL--PWDWQ--VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKW--FEADLFF 127 (143)
Q Consensus 69 wgiWec~pg~f--~~~y~--~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG--~~gtW~V 127 (143)
...+.-.||.. +++++ .+|++|||+|+++++.++. . +++++||+++||+| ..=.+.-
T Consensus 45 ~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~~~-~-~~l~~GD~i~ip~~~~~~H~~~n 107 (163)
T 3i7d_A 45 VNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDDQG-E-HPMVPGDCAAFPAGDPNGHQFVN 107 (163)
T ss_dssp EEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEETTE-E-EEECTTCEEEECTTCCCCBEEEC
T ss_pred EEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEECCE-E-EEeCCCCEEEECCCCCcceEEEE
Confidence 34566677763 45655 3799999999999998765 4 79999999999999 6666665
No 36
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=97.86 E-value=6.5e-05 Score=56.39 Aligned_cols=57 Identities=7% Similarity=0.011 Sum_probs=45.0
Q ss_pred eeeecCcee-e---eee-ccceEEEEEEeEEEEEeCCC---eeeEEEcCCcEEEEcCCCEEEEEEe
Q 032303 71 MWKTGKCKL-P---WDW-QVDQLVYIEEGEVRVVPEGS---QRYMRFLAGDLIRYPKWFEADLFFN 128 (143)
Q Consensus 71 iWec~pg~f-~---~~y-~~dE~~yILEG~V~vt~d~G---~~~~e~~AGDlv~fPkG~~gtW~V~ 128 (143)
.+.-.||.. + ++. +.+|++|||+|++++..+++ +. ..++|||.++||+|..=.|.-.
T Consensus 121 ~~~~~pg~~~~~~~~h~h~~~E~~~Vl~G~~~~~~~~~~~~~~-~~l~~GD~~~~~~~~~H~~~n~ 185 (198)
T 2bnm_A 121 VVDVLTDNPDDAKFNSGHAGNEFLFVLEGEIHMKWGDKENPKE-ALLPTGASMFVEEHVPHAFTAA 185 (198)
T ss_dssp EEEECCCCGGGCCCCCCCSSCEEEEEEESCEEEEESCTTSCEE-EEECTTCEEEECTTCCEEEEES
T ss_pred EEEEcCCCCCcccccccCCCeEEEEEEeeeEEEEECCcCCccc-EEECCCCEEEeCCCCceEEEec
Confidence 445556653 1 343 35899999999999999774 66 7999999999999998888876
No 37
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=97.86 E-value=6.6e-05 Score=51.89 Aligned_cols=58 Identities=12% Similarity=0.149 Sum_probs=44.5
Q ss_pred eeecCce-eeeeec-cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecc
Q 032303 72 WKTGKCK-LPWDWQ-VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 72 Wec~pg~-f~~~y~-~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
+.-.||. .+++++ ..|++|||+|+++++.++... ..+++||++++|+|..=.+...+.
T Consensus 32 ~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i~~~~~-~~l~~Gd~i~ip~~~~H~~~~~~~ 91 (117)
T 2b8m_A 32 IVLPRGEQMPKHYSNSYVHLIIIKGEMTLTLEDQEP-HNYKEGNIVYVPFNVKMLIQNINS 91 (117)
T ss_dssp EEEETTCBCCCEECSSCEEEEEEESEEEEEETTSCC-EEEETTCEEEECTTCEEEEECCSS
T ss_pred EEECCCCcCCCEeCCCcEEEEEEeCEEEEEECCEEE-EEeCCCCEEEECCCCcEEeEcCCC
Confidence 3344443 345554 689999999999999876652 389999999999999888876554
No 38
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=97.84 E-value=9.6e-05 Score=52.98 Aligned_cols=59 Identities=17% Similarity=0.061 Sum_probs=46.5
Q ss_pred eeeeecCce-eeeeec--cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecc
Q 032303 70 SMWKTGKCK-LPWDWQ--VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 70 giWec~pg~-f~~~y~--~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
....-.||. +++++. ..|++|||+|+++++.++ +. ..++|||+++||+|..-.|.....
T Consensus 60 ~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~-~~-~~l~~Gd~i~i~~~~~H~~~n~~~ 121 (133)
T 1o4t_A 60 ARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHDNG-KD-VPIKAGDVCFTDSGESHSIENTGN 121 (133)
T ss_dssp EEEEECTTCEEEEEECCSEEEEEEEEESEEEEEETT-EE-EEEETTEEEEECTTCEEEEECCSS
T ss_pred EEEEECCCCccCceECCCccEEEEEEeCEEEEEECC-EE-EEeCCCcEEEECCCCcEEeEECCC
Confidence 345666664 456665 479999999999999865 45 799999999999999888876543
No 39
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=97.80 E-value=5.5e-05 Score=57.53 Aligned_cols=60 Identities=18% Similarity=0.086 Sum_probs=44.6
Q ss_pred eeeeeecCcee-eeee-ccceEEEEEEeEEEEEeC--CCeeeEEEcCCcEEEEcCCCEEEEEEe
Q 032303 69 WSMWKTGKCKL-PWDW-QVDQLVYIEEGEVRVVPE--GSQRYMRFLAGDLIRYPKWFEADLFFN 128 (143)
Q Consensus 69 wgiWec~pg~f-~~~y-~~dE~~yILEG~V~vt~d--~G~~~~e~~AGDlv~fPkG~~gtW~V~ 128 (143)
.....-.||.. +.++ ..+|++|||+|+++++.. +|.....+++||+++||+|..=.+.-.
T Consensus 43 ~~~~~l~pg~~~~pHh~~a~E~~yVl~G~~~v~v~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~ 106 (178)
T 1dgw_A 43 VLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINP 106 (178)
T ss_dssp EEEEEECTTEEEEEEEESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEEC
T ss_pred EEEEEecCCcEecCcCCCCCEEEEEEeEEEEEEEEeCCCcEEEEECCCCEEEECCCCeEEEEeC
Confidence 34556677765 3333 479999999999998763 333337999999999999998777664
No 40
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=97.78 E-value=0.00017 Score=54.64 Aligned_cols=61 Identities=13% Similarity=0.120 Sum_probs=47.3
Q ss_pred ceeeeeecCcee-eeeec-cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecc
Q 032303 68 RWSMWKTGKCKL-PWDWQ-VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 68 ~wgiWec~pg~f-~~~y~-~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
....+.-.||.. +++++ ..|++|||+|+++++.++. . ..+++||++++|+|..=.+.....
T Consensus 54 ~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~v~g~-~-~~l~~GD~i~ip~g~~H~~~n~~~ 116 (166)
T 3jzv_A 54 ELRYFEVGPGGHSTLERHQHAHGVMILKGRGHAMVGRA-V-SAVAPYDLVTIPGWSWHQFRAPAD 116 (166)
T ss_dssp EEEEEEEEEEEECCCBBCSSCEEEEEEEECEEEEETTE-E-EEECTTCEEEECTTCCEEEECCTT
T ss_pred EEEEEEECCCCccCceeCCCcEEEEEEeCEEEEEECCE-E-EEeCCCCEEEECCCCcEEeEeCCC
Confidence 345666777764 45544 6899999999999998654 4 799999999999999888775433
No 41
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=97.75 E-value=0.0001 Score=56.94 Aligned_cols=61 Identities=13% Similarity=0.088 Sum_probs=48.4
Q ss_pred ceeeeeecC-cee--e-eeeccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecc
Q 032303 68 RWSMWKTGK-CKL--P-WDWQVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 68 ~wgiWec~p-g~f--~-~~y~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
.+++=+-.| |.- + .+...+|++|||+|+++|+.++ +. +.+++||.++||+|..=.|+-...
T Consensus 89 ~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl~g-~~-~~L~~Gds~~iP~g~~H~~~N~~d 153 (166)
T 2vpv_A 89 ASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTVCK-NK-FLSVKGSTFQIPAFNEYAIANRGN 153 (166)
T ss_dssp EEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEETT-EE-EEEETTCEEEECTTCEEEEEECSS
T ss_pred eeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEECC-EE-EEEcCCCEEEECCCCCEEEEECCC
Confidence 455556778 542 2 2345799999999999999965 55 799999999999999999988665
No 42
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=97.75 E-value=7.3e-05 Score=61.54 Aligned_cols=70 Identities=14% Similarity=0.130 Sum_probs=50.4
Q ss_pred eeeeeecCceee-e-eeccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecceEEEEEEEe
Q 032303 69 WSMWKTGKCKLP-W-DWQVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGPYQERYSFRA 139 (143)
Q Consensus 69 wgiWec~pg~f~-~-~y~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~vrK~Y~~~a 139 (143)
..+-+-.||.-. . .-...|++|||+|+++|+.++|+. ..+++||.+.||+|..=+|+-.++.|=+++-+.
T Consensus 72 ~~lv~l~PGg~s~~~~h~~EEfiyVleG~l~l~l~~g~~-~~L~~Gds~y~p~~~~H~~~N~~~Ar~l~V~k~ 143 (266)
T 4e2q_A 72 MYLAKMKEMSSSGLPPQDIERLIFVVEGAVTLTNTSSSS-KKLTVDSYAYLPPNFHHSLDCVESATLVVFERR 143 (266)
T ss_dssp EEEEEECSSEECCCCCTTEEEEEEEEEECEEEEC--CCC-EEECTTEEEEECTTCCCEEEESSCEEEEEEEEE
T ss_pred EEEEEECcCCcCCCCCCCCeEEEEEEEEEEEEEECCCcE-EEEcCCCEEEECCCCCEEEEeCCCEEEEEEEeE
Confidence 345555666542 1 123689999999999999986666 799999999999999999987766544444333
No 43
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=97.73 E-value=0.00022 Score=55.65 Aligned_cols=63 Identities=11% Similarity=0.105 Sum_probs=50.2
Q ss_pred ceeeeeecCcee-eee-eccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecceE
Q 032303 68 RWSMWKTGKCKL-PWD-WQVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGPYQ 132 (143)
Q Consensus 68 ~wgiWec~pg~f-~~~-y~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~vr 132 (143)
..-.+.-.||.. +.+ .+.+|+.|||||+++++.+|.+ ..++|||++++|+|..-.+.-.++.+
T Consensus 38 ~~~~~~~~~G~~~~~h~h~~~~~~~Vl~G~~~~~i~~~~--~~l~~Gd~~~~p~~~~H~~~a~~~~~ 102 (227)
T 3rns_A 38 YISLFSLAKDEEITAEAMLGNRYYYCFNGNGEIFIENNK--KTISNGDFLEITANHNYSIEARDNLK 102 (227)
T ss_dssp EEEEEEECTTCEEEECSCSSCEEEEEEESEEEEEESSCE--EEEETTEEEEECSSCCEEEEESSSEE
T ss_pred EEEEEEECCCCccCccccCCCEEEEEEeCEEEEEECCEE--EEECCCCEEEECCCCCEEEEECCCcE
Confidence 345677777764 444 4579999999999999997544 69999999999999998888877643
No 44
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=97.70 E-value=0.00014 Score=57.63 Aligned_cols=59 Identities=14% Similarity=0.049 Sum_probs=45.9
Q ss_pred eeeecCcee-eeeeccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecceE
Q 032303 71 MWKTGKCKL-PWDWQVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGPYQ 132 (143)
Q Consensus 71 iWec~pg~f-~~~y~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~vr 132 (143)
..+-.||.- ..++ .+|++|||+|+++|+.++. . ..++|||.+.||+|..-.|.-.++.+
T Consensus 54 ~~~l~Pg~~~~~~~-~ee~~~Vl~G~~~~~~~~~-~-~~l~~Gd~~~~p~~~~H~~~n~~~~~ 113 (246)
T 1sfn_A 54 TAEMPAGAQATESV-YQRFAFVLSGEVDVAVGGE-T-RTLREYDYVYLPAGEKHMLTAKTDAR 113 (246)
T ss_dssp EEEECTTCEEECCS-SEEEEEEEEEEEEEECSSC-E-EEECTTEEEEECTTCCCEEEEEEEEE
T ss_pred EEEECCCCcCCCCc-eeEEEEEEECEEEEEECCE-E-EEECCCCEEEECCCCCEEEEeCCCEE
Confidence 455566542 2234 7899999999999998654 4 79999999999999988888776554
No 45
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=97.69 E-value=0.00023 Score=52.27 Aligned_cols=58 Identities=10% Similarity=0.174 Sum_probs=45.4
Q ss_pred eeeecCce-eeeeec-cceEEEEEEeEEEEEeCCC--------eeeEEEcCCcEEEEcCCCEEEEEEec
Q 032303 71 MWKTGKCK-LPWDWQ-VDQLVYIEEGEVRVVPEGS--------QRYMRFLAGDLIRYPKWFEADLFFNG 129 (143)
Q Consensus 71 iWec~pg~-f~~~y~-~dE~~yILEG~V~vt~d~G--------~~~~e~~AGDlv~fPkG~~gtW~V~e 129 (143)
...-.||. .+++++ ..|++|||+|++++..+++ +. ..+++||++++|+|..=.+....
T Consensus 45 ~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~-~~l~~Gd~i~ip~~~~H~~~n~~ 112 (163)
T 1lr5_A 45 LQTISPGQRTPIHRHSCEEVFTVLKGKGTLLMGSSSLKYPGQPQE-IPFFQNTTFSIPVNDPHQVWNSD 112 (163)
T ss_dssp EEEECTTCBCCEEEESSCEEEEEEECCEEEEECCSSSSSCCSCEE-EEECTTEEEEECTTCCEEEECCC
T ss_pred EEEECCCCcCCCeECCCCeEEEEEeCEEEEEECCccccccCccEE-EEeCCCCEEEECCCCcEEeEeCC
Confidence 33445654 345554 6899999999999999873 55 79999999999999988887654
No 46
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=97.68 E-value=0.00024 Score=49.45 Aligned_cols=54 Identities=17% Similarity=0.066 Sum_probs=42.9
Q ss_pred eecCce-eeeee-ccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEe
Q 032303 73 KTGKCK-LPWDW-QVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFN 128 (143)
Q Consensus 73 ec~pg~-f~~~y-~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~ 128 (143)
...||. +++++ +..|+.||++|++++..++. . ..+++||++++|+|..=.+...
T Consensus 40 ~~~pg~~~~~H~H~~~Ei~~v~~G~~~~~i~~~-~-~~l~~Gd~~~i~~~~~H~~~~~ 95 (128)
T 4i4a_A 40 IVRPETKSFRHSHNEYELFIVIQGNAIIRINDE-D-FPVTKGDLIIIPLDSEHHVINN 95 (128)
T ss_dssp EECTTEECCCBCCSSEEEEEEEESEEEEEETTE-E-EEEETTCEEEECTTCCEEEEEC
T ss_pred EECCCCccCCEecCCeEEEEEEeCEEEEEECCE-E-EEECCCcEEEECCCCcEEeEeC
Confidence 344554 34454 47999999999999998655 4 6999999999999998888774
No 47
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=97.68 E-value=0.00029 Score=54.99 Aligned_cols=65 Identities=14% Similarity=0.054 Sum_probs=51.4
Q ss_pred ceeeeeecCcee-eeeec-cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEE-ecceEEE
Q 032303 68 RWSMWKTGKCKL-PWDWQ-VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFF-NGPYQER 134 (143)
Q Consensus 68 ~wgiWec~pg~f-~~~y~-~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V-~e~vrK~ 134 (143)
....|.-.||.. +++.+ .+|++|||+|+++++.++. . ..++|||.+++|+|..=.+.. .++.+=.
T Consensus 154 ~~~~~~~~~G~~~~~H~H~~~e~~~Vl~G~~~~~i~g~-~-~~l~~Gd~i~ip~~~~H~~~~~~~~~~~l 221 (227)
T 3rns_A 154 VMTIMSFWKGESLDPHKAPGDALVTVLDGEGKYYVDGK-P-FIVKKGESAVLPANIPHAVEAETENFKML 221 (227)
T ss_dssp EEEEEEECTTCEEEEECCSSEEEEEEEEEEEEEEETTE-E-EEEETTEEEEECTTSCEEEECCSSCEEEE
T ss_pred EEEEEEECCCCccCCEECCCcEEEEEEeEEEEEEECCE-E-EEECCCCEEEECCCCcEEEEeCCCCEEEE
Confidence 445777788765 55654 5899999999999998754 4 799999999999999888877 6665433
No 48
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=97.66 E-value=0.00039 Score=56.09 Aligned_cols=69 Identities=12% Similarity=0.061 Sum_probs=56.6
Q ss_pred ceeeeeecCce-eeeeec-cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEe-cceEEEEEE
Q 032303 68 RWSMWKTGKCK-LPWDWQ-VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFN-GPYQERYSF 137 (143)
Q Consensus 68 ~wgiWec~pg~-f~~~y~-~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~-e~vrK~Y~~ 137 (143)
..++|.-.||. ++++.+ .+|+.|||+|++.++.++|+. ..++|||.+++|.|..-.+... +|+.-.|+.
T Consensus 133 ~lG~v~l~PG~~yP~HsHp~EEiy~VLsG~~e~~v~~g~~-~~l~pGd~v~ipsgv~Ha~rt~dePllalwvW 204 (217)
T 4b29_A 133 RVTVGYWGPGLDYGWHEHLPEELYSVVSGRALFHLRNAPD-LMLEPGQTRFHPANAPHAMTTLTDPILTLVLW 204 (217)
T ss_dssp EEEEEEECSSCEEEEEECSSEEEEEEEEECEEEEETTSCC-EEECTTCEEEECTTCCEEEECCSSCEEEEEEE
T ss_pred EEEEEEECCCCcCCCCCCCCceEEEEEeCCEEEEECCCCE-EecCCCCEEEcCCCCceeEEECCccEEEEEEE
Confidence 45788888886 577776 689999999999999998887 7999999999999998877653 346656655
No 49
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=97.64 E-value=0.00022 Score=52.01 Aligned_cols=57 Identities=18% Similarity=0.129 Sum_probs=50.2
Q ss_pred ecCceeeeeeccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecc
Q 032303 74 TGKCKLPWDWQVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 74 c~pg~f~~~y~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
..||.|.+.....|.+.|++|+.+|...+.+...+|.||+.|.+|++.+=.-+|.++
T Consensus 43 m~PGeY~F~T~~~E~MevvsG~l~V~LpG~~eW~~~~aGesF~VpanssF~lkv~~~ 99 (106)
T 3eo6_A 43 LHPGVYTLSSEVAETIRVLSGMAYYHAEGANDVQELHAGDSMVIPANQSYRLEVMEP 99 (106)
T ss_dssp ECSEEEEECCSSCEEEEEEEEEEEEECTTCSSCEEEETTCEEEECSSSCEEEEEEEE
T ss_pred EeeeEEEecCCCcEEEEEEEeEEEEECCCCccCEEECCCCEEEECCCCcEEEEECce
Confidence 368888888889999999999999999987666899999999999999888887764
No 50
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=97.62 E-value=0.0002 Score=56.81 Aligned_cols=58 Identities=9% Similarity=0.096 Sum_probs=44.5
Q ss_pred eeeeecCceee-ee-e--ccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEec
Q 032303 70 SMWKTGKCKLP-WD-W--QVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNG 129 (143)
Q Consensus 70 giWec~pg~f~-~~-y--~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e 129 (143)
-..+-.||.-. .+ . ..+|++|||+|+++|+.+ |+. ..++|||.+.||+|..-.|.-..
T Consensus 62 ~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~-~~~-~~L~~Gd~~~~~~~~~H~~~N~~ 123 (261)
T 1rc6_A 62 YLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAE-GKT-FALSEGGYLYCPPGSLMTFVNAQ 123 (261)
T ss_dssp EEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEET-TEE-EEEETTEEEEECTTCCCEEEECS
T ss_pred EEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEEC-CEE-EEECCCCEEEECCCCCEEEEeCC
Confidence 34555676532 11 2 257999999999999985 555 79999999999999998888763
No 51
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=97.62 E-value=0.00037 Score=50.96 Aligned_cols=70 Identities=10% Similarity=-0.026 Sum_probs=51.3
Q ss_pred eeeeeecCce-eeeeec-cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecce-EEEEEEEe
Q 032303 69 WSMWKTGKCK-LPWDWQ-VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGPY-QERYSFRA 139 (143)
Q Consensus 69 wgiWec~pg~-f~~~y~-~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~v-rK~Y~~~a 139 (143)
...+.-.||. .++++. ..|++|||+|++++..++... ..+++||+++||+|..=.+.....- -..+.+..
T Consensus 50 ~~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~~-~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~ 122 (147)
T 2f4p_A 50 VYDVVFEPGARTHWHSHPGGQILIVTRGKGFYQERGKPA-RILKKGDVVEIPPNVVHWHGAAPDEELVHIGIST 122 (147)
T ss_dssp EEEEEECTTCEECSEECTTCEEEEEEEEEEEEEETTSCC-EEEETTCEEEECTTCCEEEEEBTTBCEEEEEEEC
T ss_pred EEEEEECCCCccCceECCCceEEEEEeCEEEEEECCEEE-EEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEc
Confidence 3445556654 456654 589999999999999987764 5899999999999998888876542 23344433
No 52
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=97.61 E-value=0.0005 Score=54.16 Aligned_cols=52 Identities=15% Similarity=0.197 Sum_probs=42.1
Q ss_pred eeeeec-cceEEEEEEeEEEEEeCCC--ee-eEEEcCCcEEEEcCCCEEEEEEecc
Q 032303 79 LPWDWQ-VDQLVYIEEGEVRVVPEGS--QR-YMRFLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 79 f~~~y~-~dE~~yILEG~V~vt~d~G--~~-~~e~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
|+|++. .+|+.|||+|++.+..+++ +. .+.+++||++++|+|..=.+...+.
T Consensus 97 ~~~H~H~~~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~ 152 (191)
T 1vr3_A 97 FEEHLHLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEK 152 (191)
T ss_dssp HSCEECSSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTT
T ss_pred CcceECCcceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCC
Confidence 577775 6999999999999998874 32 1589999999999998877666444
No 53
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=97.59 E-value=0.00053 Score=61.55 Aligned_cols=65 Identities=17% Similarity=0.182 Sum_probs=46.5
Q ss_pred HhhcCCCceeeeeecCcee-eeee--ccceEEEEEEeEEEEEeCC--Cee--eEEEcCCcEEEEcCCCEEEEEE
Q 032303 61 LKELDVSRWSMWKTGKCKL-PWDW--QVDQLVYIEEGEVRVVPEG--SQR--YMRFLAGDLIRYPKWFEADLFF 127 (143)
Q Consensus 61 l~~lGv~~wgiWec~pg~f-~~~y--~~dE~~yILEG~V~vt~d~--G~~--~~e~~AGDlv~fPkG~~gtW~V 127 (143)
|..||+ +.....-.||.+ +.|| ..+|+.|||+|+++|+.-+ |.. ..++++||+++||+|+.- +.+
T Consensus 389 L~~Lgi-S~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GDV~v~P~G~~H-~~~ 460 (531)
T 3fz3_A 389 LRFLRL-SAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLFIVPQNHGV-IQQ 460 (531)
T ss_dssp HHHHTC-EEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE-EEE
T ss_pred cccCce-eEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCeEEEECCCCeE-EEe
Confidence 344454 445677777776 3444 4799999999999977643 432 258999999999999876 444
No 54
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=97.58 E-value=0.00025 Score=61.16 Aligned_cols=68 Identities=16% Similarity=0.167 Sum_probs=52.0
Q ss_pred HHhhcCCCceeeeeecCcee-eee-eccceEEEEEEeEEEEEe---CCCeeeEEEcCCcEEEEcCCCEEEEEEe
Q 032303 60 RLKELDVSRWSMWKTGKCKL-PWD-WQVDQLVYIEEGEVRVVP---EGSQRYMRFLAGDLIRYPKWFEADLFFN 128 (143)
Q Consensus 60 rl~~lGv~~wgiWec~pg~f-~~~-y~~dE~~yILEG~V~vt~---d~G~~~~e~~AGDlv~fPkG~~gtW~V~ 128 (143)
.|.-+|-.+.....-.||.. +.| .+.+|+.|||+|+++++. ++++. ..+++||+++||+|..=-+.-.
T Consensus 42 ~l~~~~~~s~~~~~l~PGg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~~~-~~l~~GDv~~iP~G~~H~~~N~ 114 (416)
T 1uij_A 42 QLENLRDYRIVQFQSKPNTILLPHHADADFLLFVLSGRAILTLVNNDDRDS-YNLHPGDAQRIPAGTTYYLVNP 114 (416)
T ss_dssp GGGGGTTCEEEEEEECTTEEEEEEEESEEEEEEEEESCEEEEEECSSCEEE-EEECTTEEEEECTTCEEEEEEC
T ss_pred cccCcccEEEEEEEeccCcCcccccCCCceEEEEEeeEEEEEEEECCCCeE-EEecCCCEEEECCCCeEEEEec
Confidence 34445644677888889885 334 458999999999999885 23455 7999999999999998777665
No 55
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=97.58 E-value=0.00041 Score=55.70 Aligned_cols=60 Identities=13% Similarity=0.277 Sum_probs=47.1
Q ss_pred eeeeeecCce-eeeeec--cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecc
Q 032303 69 WSMWKTGKCK-LPWDWQ--VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 69 wgiWec~pg~-f~~~y~--~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
.-...-.||. .+++++ .+|++|||+|+++++.+ |+. ..+++||+++||+|..=.+...+.
T Consensus 48 ~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~~-~~~-~~l~~Gd~~~~p~~~~H~~~n~~~ 110 (337)
T 1y3t_A 48 IVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTLD-GER-YLLISGDYANIPAGTPHSYRMQSH 110 (337)
T ss_dssp EEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEET-TEE-EEECTTCEEEECTTCCEEEEECST
T ss_pred EEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEEC-CEE-EEECCCCEEEECCCCcEEEEECCC
Confidence 3445566764 345554 68999999999999975 555 799999999999999888887655
No 56
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=97.57 E-value=0.0013 Score=45.79 Aligned_cols=60 Identities=17% Similarity=0.179 Sum_probs=44.4
Q ss_pred ceeeeeecCcee-e-eeec-cceEEE-EEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEec
Q 032303 68 RWSMWKTGKCKL-P-WDWQ-VDQLVY-IEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNG 129 (143)
Q Consensus 68 ~wgiWec~pg~f-~-~~y~-~dE~~y-ILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e 129 (143)
........||.. + +++. ..|.++ |++|+++++.++ +. ..++|||++++|+|..=.+....
T Consensus 27 ~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i~~-~~-~~l~~Gd~i~i~~~~~H~~~~~~ 90 (125)
T 3cew_A 27 EVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITIDG-EK-IELQAGDWLRIAPDGKRQISAAS 90 (125)
T ss_dssp EEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEETT-EE-EEEETTEEEEECTTCCEEEEEBT
T ss_pred EEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEECC-EE-EEeCCCCEEEECCCCcEEEEcCC
Confidence 344556666653 3 5655 345555 999999999865 44 79999999999999988887763
No 57
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=97.57 E-value=0.00027 Score=56.69 Aligned_cols=58 Identities=17% Similarity=0.131 Sum_probs=44.2
Q ss_pred eeeeecCceee-ee-e--ccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEec
Q 032303 70 SMWKTGKCKLP-WD-W--QVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNG 129 (143)
Q Consensus 70 giWec~pg~f~-~~-y--~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e 129 (143)
-..+-.||.-. .. . ..+|++|||+|+++|+.++ +. ..++|||.+.||+|..-.|.-..
T Consensus 65 ~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~~-~~-~~L~~GD~~~~~~~~~H~~~N~~ 126 (274)
T 1sef_A 65 YIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSDGQ-ET-HELEAGGYAYFTPEMKMYLANAQ 126 (274)
T ss_dssp EEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEECSS-CE-EEEETTEEEEECTTSCCEEEESS
T ss_pred EEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEECC-EE-EEECCCCEEEECCCCCEEEEeCC
Confidence 34555666532 11 1 2579999999999999864 45 79999999999999998888764
No 58
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=97.56 E-value=0.00012 Score=56.52 Aligned_cols=67 Identities=10% Similarity=0.003 Sum_probs=50.9
Q ss_pred ceeeeeecCcee-eeeec-cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecc--eEEEEE
Q 032303 68 RWSMWKTGKCKL-PWDWQ-VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGP--YQERYS 136 (143)
Q Consensus 68 ~wgiWec~pg~f-~~~y~-~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~--vrK~Y~ 136 (143)
..-.+.-.||.- +++.+ ..|+.|||+|+++|+.++|+. ..++|||.+ ||+|..=.|.-... .+=.++
T Consensus 80 ~~~~v~l~PG~~~~~H~H~~eE~~~VLeGel~l~ld~ge~-~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V 150 (172)
T 3es1_A 80 VIRVVDMLPGKESPMHRTNSIDYGIVLEGEIELELDDGAK-RTVRQGGII-VQRGTNHLWRNTTDKPCRIAFI 150 (172)
T ss_dssp EEEEEEECTTCBCCCBCCSEEEEEEEEESCEEEECGGGCE-EEECTTCEE-EECSCCBEEECCSSSCEEEEEE
T ss_pred EEEEEEECCCCCCCCeecCceEEEEEEeCEEEEEECCCeE-EEECCCCEE-EeCCCcEEEEeCCCCCEEEEEE
Confidence 345566677754 45554 478999999999999987777 799999999 99999999987643 443333
No 59
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=97.56 E-value=0.00069 Score=59.02 Aligned_cols=70 Identities=20% Similarity=0.140 Sum_probs=52.6
Q ss_pred HHhhcCCCceeeeeecCcee-eeee-ccceEEEEEEeEEEEEe--CCCeeeEEEcCCcEEEEcCCCEEEEEEec
Q 032303 60 RLKELDVSRWSMWKTGKCKL-PWDW-QVDQLVYIEEGEVRVVP--EGSQRYMRFLAGDLIRYPKWFEADLFFNG 129 (143)
Q Consensus 60 rl~~lGv~~wgiWec~pg~f-~~~y-~~dE~~yILEG~V~vt~--d~G~~~~e~~AGDlv~fPkG~~gtW~V~e 129 (143)
.+..+|..+.....-.||.. +.++ +.+|+.|||+|+++++. .++.....+++||+++||+|..=-|.-..
T Consensus 79 ~l~~~g~~s~~~~~l~Pgg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~~P~G~~H~~~N~g 152 (445)
T 2cav_A 79 KLENLRDYRVLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPD 152 (445)
T ss_dssp TTGGGTTEEEEEEEECSSEEEEEEEESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEECC
T ss_pred cccccCcEEEEEEEECCCcCccCcCCCCceEEEEEeCEEEEEEEeCCCCEEEEecCCCEEEECCCCcEEEEECC
Confidence 35455645666788899986 2334 58999999999999884 33333389999999999999987777654
No 60
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=97.55 E-value=0.0017 Score=56.40 Aligned_cols=70 Identities=16% Similarity=0.099 Sum_probs=53.0
Q ss_pred HHhhcCCCceeeeeecCcee-eeee-ccceEEEEEEeEEEEEe--CCCeeeEEEcCCcEEEEcCCCEEEEEEec
Q 032303 60 RLKELDVSRWSMWKTGKCKL-PWDW-QVDQLVYIEEGEVRVVP--EGSQRYMRFLAGDLIRYPKWFEADLFFNG 129 (143)
Q Consensus 60 rl~~lGv~~wgiWec~pg~f-~~~y-~~dE~~yILEG~V~vt~--d~G~~~~e~~AGDlv~fPkG~~gtW~V~e 129 (143)
.|.-+|..+.....-.||.. +.++ +.+|++|||+|+++++. .++.....+++||+++||+|..=-+.-..
T Consensus 54 ~l~~~~~~s~~~~~l~PGg~~~pHh~~a~Ei~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g 127 (434)
T 2ea7_A 54 QMQNLENYRVVEFKSKPNTLLLPHHADADFLLVVLNGTAVLTLVNPDSRDSYILEQGHAQKIPAGTTFFLVNPD 127 (434)
T ss_dssp GGGGGTTCEEEEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEEECTTCEEEEEECC
T ss_pred ccCccccEEEEEEEecCCcCccCccCCCceEEEEEecEEEEEEEeCCCCEEEEeCCCCEEEECCCccEEEEeCC
Confidence 45556645677888899987 3344 48999999999999886 33333389999999999999877666653
No 61
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=97.52 E-value=0.00046 Score=55.96 Aligned_cols=68 Identities=10% Similarity=0.065 Sum_probs=49.8
Q ss_pred ceeeeeecCcee---eee-eccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEe--cceEEEEEE
Q 032303 68 RWSMWKTGKCKL---PWD-WQVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFN--GPYQERYSF 137 (143)
Q Consensus 68 ~wgiWec~pg~f---~~~-y~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~--e~vrK~Y~~ 137 (143)
....+.-.||.- +++ ...+|++|||+|+++|+.++. . .+++|||.++||+|..=.|.-. ++++=..+.
T Consensus 69 ~~~~~~l~PG~~~~~~~h~H~~eE~~~Vl~G~l~v~v~g~-~-~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l~v~ 142 (278)
T 1sq4_A 69 SQYIVELAPNGGSDKPEQDPNAEAVLFVVEGELSLTLQGQ-V-HAMQPGGYAFIPPGADYKVRNTTGQHTRFHWIR 142 (278)
T ss_dssp EEEEEEEEEEEEESSCCCCTTEEEEEEEEESCEEEEESSC-E-EEECTTEEEEECTTCCEEEECCSSSCEEEEEEE
T ss_pred EEEEEEECCCCccCCCCcCCCceEEEEEEeCEEEEEECCE-E-EEECCCCEEEECCCCcEEEEECCCCCEEEEEEE
Confidence 344566667754 233 236899999999999998754 4 7999999999999999888876 344433333
No 62
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=97.52 E-value=0.00029 Score=51.18 Aligned_cols=59 Identities=17% Similarity=0.139 Sum_probs=46.1
Q ss_pred eeeeecCce-eeeeec--cceEEEEEEeEEEEEeCCCe-----eeEEEcCCcEEEEcCCCEEEEEEec
Q 032303 70 SMWKTGKCK-LPWDWQ--VDQLVYIEEGEVRVVPEGSQ-----RYMRFLAGDLIRYPKWFEADLFFNG 129 (143)
Q Consensus 70 giWec~pg~-f~~~y~--~dE~~yILEG~V~vt~d~G~-----~~~e~~AGDlv~fPkG~~gtW~V~e 129 (143)
..+...||. .+++++ .+|++|||+|+++++.++.. . ..+++||+++||+|..=.+....
T Consensus 46 ~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~-~~l~~Gd~i~ip~g~~H~~~n~~ 112 (148)
T 2oa2_A 46 TLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQ-EEVFDDYAILIPAGTWHNVRNTG 112 (148)
T ss_dssp EEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEE-EEEETTCEEEECTTCEEEEEECS
T ss_pred EEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccccceee-EEECCCCEEEECCCCcEEEEECC
Confidence 345556664 345555 46999999999999987765 2 58999999999999988887754
No 63
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=97.50 E-value=0.00036 Score=53.44 Aligned_cols=61 Identities=8% Similarity=0.135 Sum_probs=46.4
Q ss_pred ceeeeeecCcee-------eeeecc----ceEEEEEEeEEEEEeCCCe----eeEEEcCCcEEEEcCCCEEEEEEec
Q 032303 68 RWSMWKTGKCKL-------PWDWQV----DQLVYIEEGEVRVVPEGSQ----RYMRFLAGDLIRYPKWFEADLFFNG 129 (143)
Q Consensus 68 ~wgiWec~pg~f-------~~~y~~----dE~~yILEG~V~vt~d~G~----~~~e~~AGDlv~fPkG~~gtW~V~e 129 (143)
...+..-.||.. +++++. +|++|||+|++.++.++.. . ..+++||+++||+|..=.+.-..
T Consensus 68 ~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~g~~~~-~~l~~GD~v~ip~g~~H~~~N~g 143 (190)
T 1x82_A 68 NFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPEGDAKW-ISMEPGTVVYVPPYWAHRTVNIG 143 (190)
T ss_dssp EEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTTCCEEE-EEECTTCEEEECTTCEEEEEECS
T ss_pred EEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCcCCcEEE-EEECCCcEEEECCCCeEEEEECC
Confidence 344556677764 345553 6999999999999987754 3 58999999999999987776543
No 64
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=97.49 E-value=0.00045 Score=54.36 Aligned_cols=63 Identities=11% Similarity=0.037 Sum_probs=47.6
Q ss_pred ecC-ce-eeeeec-cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEe--cceEEEEEEE
Q 032303 74 TGK-CK-LPWDWQ-VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFN--GPYQERYSFR 138 (143)
Q Consensus 74 c~p-g~-f~~~y~-~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~--e~vrK~Y~~~ 138 (143)
-.| |. .+++.+ ..|++|||+|+++++.++.. ..++|||.++||+|..=.+... ++++=.+++.
T Consensus 152 ~~p~g~~~~~H~H~~~e~~~Vl~G~~~~~i~~~~--~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~ 219 (243)
T 3h7j_A 152 IPGNGGEMPFHKHRNEQIGICIGGGYDMTVEGCT--VEMKFGTAYFCEPREDHGAINRSEKESKSINIFF 219 (243)
T ss_dssp ECTTTEEEEEECCSSEEEEEECSSCEEEEETTEE--EEECTTCEEEECTTCCEEEEECSSSCEEEEEEEE
T ss_pred ECCCCCcCCCEeCCCcEEEEEEECEEEEEECCEE--EEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEc
Confidence 345 43 455554 58999999999999987654 6899999999999988888776 4455555543
No 65
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=97.48 E-value=6.5e-05 Score=57.78 Aligned_cols=45 Identities=7% Similarity=0.079 Sum_probs=37.5
Q ss_pred eeeec--cceEEEEEE--eEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEE
Q 032303 80 PWDWQ--VDQLVYIEE--GEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLF 126 (143)
Q Consensus 80 ~~~y~--~dE~~yILE--G~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~ 126 (143)
+++++ .+|++|||+ |++++..+ |+. +.++|||++++|+|..=.+.
T Consensus 59 ~~H~H~~~~E~~yVLe~~G~g~v~id-ge~-~~l~~GD~v~IPpg~~H~i~ 107 (157)
T 4h7l_A 59 RTHYHREHQEIYVVLDHAAHATIELN-GQS-YPLTKLLAISIPPLVRHRIV 107 (157)
T ss_dssp CCBBCSSCEEEEEEEEECTTCEEEET-TEE-EECCTTEEEEECTTCCEEEE
T ss_pred cceECCCCcEEEEEEecCcEEEEEEC-CEE-EEeCCCCEEEECCCCeEeeE
Confidence 45555 479999999 99999986 455 79999999999999877664
No 66
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=97.47 E-value=0.00078 Score=55.12 Aligned_cols=60 Identities=15% Similarity=0.263 Sum_probs=44.6
Q ss_pred eeeeecCcee-eeeec--cceEEEEEEeEEEEEeC--CC-eeeEEEcCCcEEEEcCCCEEEEEEec
Q 032303 70 SMWKTGKCKL-PWDWQ--VDQLVYIEEGEVRVVPE--GS-QRYMRFLAGDLIRYPKWFEADLFFNG 129 (143)
Q Consensus 70 giWec~pg~f-~~~y~--~dE~~yILEG~V~vt~d--~G-~~~~e~~AGDlv~fPkG~~gtW~V~e 129 (143)
..-.-.||.. +.+++ .+|++|||+|+++++.. +| .....+++||+++||+|..=.+.-.+
T Consensus 55 ~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~ 120 (361)
T 2vqa_A 55 VYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKVEIADVDKGGLWYFPRGWGHSIEGIG 120 (361)
T ss_dssp EEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSCEEEEEEETTEEEEECTTCEEEEEECS
T ss_pred EEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCC
Confidence 3444556654 34443 69999999999999882 33 22379999999999999988777764
No 67
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=97.46 E-value=0.00061 Score=54.01 Aligned_cols=58 Identities=12% Similarity=0.014 Sum_probs=44.7
Q ss_pred eeeeecCce-eeeee--ccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEec
Q 032303 70 SMWKTGKCK-LPWDW--QVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNG 129 (143)
Q Consensus 70 giWec~pg~-f~~~y--~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e 129 (143)
..+.-.||. .++++ ..+|+.|||+|+++++.++ +. ++++|||.++||+|..=.+.-..
T Consensus 182 ~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~-~~-~~l~~GD~i~~~~~~~H~~~n~g 242 (261)
T 1rc6_A 182 HILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDN-NW-IPVKKGDYIFMGAYSLQAGYGVG 242 (261)
T ss_dssp EEEEECTTCCBEEEEEESSCEEEEEEESEEEEESSS-CE-EEEETTCEEEECSSEEEEEEEC-
T ss_pred EEEEECCCCccCcccCCCceEEEEEEEeEEEEEECC-EE-EEeCCCCEEEECCCCcEEeEeCC
Confidence 455666765 34444 3689999999999999875 45 79999999999999877776653
No 68
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=97.44 E-value=0.00062 Score=54.62 Aligned_cols=49 Identities=16% Similarity=0.303 Sum_probs=41.7
Q ss_pred eeeec--cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecc
Q 032303 80 PWDWQ--VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 80 ~~~y~--~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
+++++ .+|++|||+|+++++.++ +. .++++||+++||+|..-.|.....
T Consensus 232 ~~h~H~~~~e~~~vl~G~~~~~i~~-~~-~~l~~GD~~~ip~~~~H~~~n~~~ 282 (337)
T 1y3t_A 232 VDHYHEYHTETFYCLEGQMTMWTDG-QE-IQLNPGDFLHVPANTVHSYRLDSH 282 (337)
T ss_dssp CCEECSSCEEEEEEEESCEEEEETT-EE-EEECTTCEEEECTTCCEEEEECSS
T ss_pred CCcCCCCCcEEEEEEeCEEEEEECC-EE-EEECCCCEEEECCCCeEEEEECCC
Confidence 45554 589999999999999965 55 799999999999999888888765
No 69
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=97.41 E-value=0.0004 Score=61.10 Aligned_cols=62 Identities=15% Similarity=0.229 Sum_probs=43.7
Q ss_pred HhhcCCCceeeeeecCcee-eeeec--cceEEEEEEeEEEEEeCC--CeeeE--EEcCCcEEEEcCCCEE
Q 032303 61 LKELDVSRWSMWKTGKCKL-PWDWQ--VDQLVYIEEGEVRVVPEG--SQRYM--RFLAGDLIRYPKWFEA 123 (143)
Q Consensus 61 l~~lGv~~wgiWec~pg~f-~~~y~--~dE~~yILEG~V~vt~d~--G~~~~--e~~AGDlv~fPkG~~g 123 (143)
|..+|+ +.....-.||.. +.|++ .+|+.|||+|+++++..+ |...+ +++|||+++||+|+.=
T Consensus 333 L~~l~i-s~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~viP~G~~H 401 (476)
T 1fxz_A 333 LSWLRL-SAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVV 401 (476)
T ss_dssp GTTTTC-CEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred cccCcc-eEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEEECCCCeE
Confidence 344443 344566677775 45554 689999999999997643 44323 4999999999999754
No 70
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=97.40 E-value=0.0014 Score=54.30 Aligned_cols=62 Identities=15% Similarity=0.158 Sum_probs=46.8
Q ss_pred ceeeeeecCcee-eeeec-cceEEEEEEeEEEEEeC--CCee-eEEEcCCcEEEEcCCCEEEEEEec
Q 032303 68 RWSMWKTGKCKL-PWDWQ-VDQLVYIEEGEVRVVPE--GSQR-YMRFLAGDLIRYPKWFEADLFFNG 129 (143)
Q Consensus 68 ~wgiWec~pg~f-~~~y~-~dE~~yILEG~V~vt~d--~G~~-~~e~~AGDlv~fPkG~~gtW~V~e 129 (143)
......-.||.. +.|++ ..|++|||+|+++++.. +|+. ...+++||+++||+|..=.+.-.+
T Consensus 80 ~~~~~~l~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~ 146 (385)
T 1j58_A 80 ASVNMRLKPGAIRELHWHKEAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALE 146 (385)
T ss_dssp EEEEEEECTTCEEEEEEESSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEEEE
T ss_pred EEEEEEECCCCCCCCccCChheEEEEEeeeEEEEEEeCCCcEEEEEeCCCCEEEECCCCeEEEEECC
Confidence 344566677764 45554 79999999999999873 4552 159999999999999987776654
No 71
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=97.40 E-value=0.00049 Score=61.26 Aligned_cols=62 Identities=16% Similarity=0.232 Sum_probs=42.8
Q ss_pred HhhcCCCceeeeeecCcee-eeeec--cceEEEEEEeEEEEEeC--CCeeeE--EEcCCcEEEEcCCCEE
Q 032303 61 LKELDVSRWSMWKTGKCKL-PWDWQ--VDQLVYIEEGEVRVVPE--GSQRYM--RFLAGDLIRYPKWFEA 123 (143)
Q Consensus 61 l~~lGv~~wgiWec~pg~f-~~~y~--~dE~~yILEG~V~vt~d--~G~~~~--e~~AGDlv~fPkG~~g 123 (143)
|..||+ +.....-.||.. +.|++ .+|+.|||+|+++++.. +|...+ ++++||+++||+|+.=
T Consensus 367 L~~l~i-s~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~viP~G~~H 435 (510)
T 3c3v_A 367 LRWLGL-SAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLVVPQNFAV 435 (510)
T ss_dssp HHHHTC-EEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred cccceE-EEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEEEECCCCeE
Confidence 333443 334556667765 44554 68999999999998764 343323 4999999999999753
No 72
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=97.38 E-value=0.00031 Score=61.57 Aligned_cols=51 Identities=16% Similarity=0.249 Sum_probs=38.1
Q ss_pred eecCcee---eeeeccceEEEEEEeEEEEEeCC--CeeeE--EEcCCcEEEEcCCCEE
Q 032303 73 KTGKCKL---PWDWQVDQLVYIEEGEVRVVPEG--SQRYM--RFLAGDLIRYPKWFEA 123 (143)
Q Consensus 73 ec~pg~f---~~~y~~dE~~yILEG~V~vt~d~--G~~~~--e~~AGDlv~fPkG~~g 123 (143)
.=.||.+ .|+-..+|+.||++|+++|+.-+ |...+ ++++||+++||+|+.-
T Consensus 328 ~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GDv~v~P~G~~H 385 (459)
T 2e9q_A 328 VLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLMIPQNFVV 385 (459)
T ss_dssp EECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred EeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCcEEEECCCCEE
Confidence 3356665 34445799999999999888754 54434 4999999999999864
No 73
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=97.37 E-value=0.00016 Score=60.64 Aligned_cols=45 Identities=13% Similarity=0.262 Sum_probs=37.6
Q ss_pred eeeeeec-cceEEEEEEeEEEEEeCC-C-eeeEEEcCCcEEEEcCCCE
Q 032303 78 KLPWDWQ-VDQLVYIEEGEVRVVPEG-S-QRYMRFLAGDLIRYPKWFE 122 (143)
Q Consensus 78 ~f~~~y~-~dE~~yILEG~V~vt~d~-G-~~~~e~~AGDlv~fPkG~~ 122 (143)
+|+||.+ .+|++|+|+|...|...| | -..+.|++||++++|+|..
T Consensus 43 R~d~H~~~~dE~FyqlkG~m~l~~~d~g~~~~V~i~eGemfllP~gv~ 90 (286)
T 2qnk_A 43 RKDYHIEEGEEVFYQLEGDMVLRVLEQGKHRDVVIRQGEIFLLPARVP 90 (286)
T ss_dssp CCCEEECSSCEEEEEEESCEEEEEEETTEEEEEEECTTEEEEECTTCC
T ss_pred CccCcCCCCCeEEEEEeCeEEEEEEeCCceeeEEECCCeEEEeCCCCC
Confidence 4788876 699999999999998876 5 1228999999999999974
No 74
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=97.37 E-value=0.0008 Score=52.88 Aligned_cols=60 Identities=10% Similarity=-0.103 Sum_probs=48.0
Q ss_pred eeeeeecCcee-eeeec-cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEE-EcCCCEEEEEEecc
Q 032303 69 WSMWKTGKCKL-PWDWQ-VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIR-YPKWFEADLFFNGP 130 (143)
Q Consensus 69 wgiWec~pg~f-~~~y~-~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~-fPkG~~gtW~V~e~ 130 (143)
...|.-.||.. +++.. ..|++|||+|+++++.+ |+. ..+.|||.++ +|+|..=.+...+.
T Consensus 36 ~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~~~-~~~-~~l~~Gd~i~~ip~~~~H~~~n~~~ 98 (243)
T 3h7j_A 36 VLMSYVPPHTNVEPHQHKEVQIGMVVSGELMMTVG-DVT-RKMTALESAYIAPPHVPHGARNDTD 98 (243)
T ss_dssp EEEEEECTTEEEEEECCSSEEEEEEEESEEEEEET-TEE-EEEETTTCEEEECTTCCEEEEECSS
T ss_pred EEEEEECCCCccCCEECCCcEEEEEEEeEEEEEEC-CEE-EEECCCCEEEEcCCCCcEeeEeCCC
Confidence 44566777764 56654 78999999999999995 455 7999999995 99999988888655
No 75
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=97.37 E-value=0.00019 Score=55.68 Aligned_cols=49 Identities=18% Similarity=0.121 Sum_probs=37.9
Q ss_pred eeeeec-cceEEEEEEeEEEEEeC-CCee-eEEEcCCcEEEEcCCCEEEEEE
Q 032303 79 LPWDWQ-VDQLVYIEEGEVRVVPE-GSQR-YMRFLAGDLIRYPKWFEADLFF 127 (143)
Q Consensus 79 f~~~y~-~dE~~yILEG~V~vt~d-~G~~-~~e~~AGDlv~fPkG~~gtW~V 127 (143)
|+||++ .+|+.|||+|++.+... +++. .+.+++||++++|+|..=.+..
T Consensus 93 ~~~H~H~~~Ei~~Vl~G~g~~~i~~~d~~~~~~l~~GDli~IP~g~~H~~~~ 144 (179)
T 1zrr_A 93 LNEHTHGEDEVRFFVEGAGLFCLHIGDEVFQVLCEKNDLISVPAHTPHWFDM 144 (179)
T ss_dssp HSCBEESSCEEEEEEESCCCCCEECSSCEEEEECCCSCEEEECTTCCBCCCC
T ss_pred ccceECChheEEEEEcceEEEEEEeCCEEEEEEECCCCEEEECCCCeEeeec
Confidence 577775 69999999999998763 4443 1469999999999998755444
No 76
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=97.35 E-value=0.00036 Score=61.68 Aligned_cols=62 Identities=16% Similarity=0.300 Sum_probs=43.8
Q ss_pred HhhcCCCceeeeeecCcee-eeeec--cceEEEEEEeEEEEEeCC--Ceee--EEEcCCcEEEEcCCCEE
Q 032303 61 LKELDVSRWSMWKTGKCKL-PWDWQ--VDQLVYIEEGEVRVVPEG--SQRY--MRFLAGDLIRYPKWFEA 123 (143)
Q Consensus 61 l~~lGv~~wgiWec~pg~f-~~~y~--~dE~~yILEG~V~vt~d~--G~~~--~e~~AGDlv~fPkG~~g 123 (143)
|..+|. +.....-.||.. ++|++ .+|++|||+|+++++..+ |... .+++|||+++||+|+.=
T Consensus 362 L~~lgl-s~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~vvP~G~~H 430 (493)
T 2d5f_A 362 LRQFGL-SAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLVVPQNFVV 430 (493)
T ss_dssp HHHHTC-EEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred ccccce-EEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEEEECCCCeE
Confidence 344443 344555666654 56665 689999999999997644 4432 35999999999999963
No 77
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=97.32 E-value=0.00064 Score=54.44 Aligned_cols=60 Identities=10% Similarity=0.101 Sum_probs=46.4
Q ss_pred eeeeeecCcee-ee-ee-ccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecc
Q 032303 69 WSMWKTGKCKL-PW-DW-QVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 69 wgiWec~pg~f-~~-~y-~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
...+.-.||.. ++ ++ ..+|+.|||+|++++..++ +. .+++|||+++||+|..=.|.-...
T Consensus 184 ~~~~~l~pg~~~~~~H~H~~~E~~yVl~G~~~~~i~~-~~-~~l~~GD~i~i~~~~~H~~~n~~~ 246 (274)
T 1sef_A 184 MHILSFEPGASHAYIETHVQEHGAYLISGQGMYNLDN-EW-YPVEKGDYIFMSAYVPQAAYAVGR 246 (274)
T ss_dssp EEEEEECTTCBCSSCBCCSCCEEEEEEECEEEEEETT-EE-EEEETTCEEEECTTCCEEEEEECS
T ss_pred EEEEEECCCCccCcceeccCeEEEEEEeCEEEEEECC-EE-EEECCCCEEEECCCCCEEEEeCCC
Confidence 34556667653 33 43 3689999999999999865 44 799999999999999888877644
No 78
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=97.30 E-value=0.00085 Score=55.98 Aligned_cols=56 Identities=14% Similarity=0.154 Sum_probs=43.9
Q ss_pred eeec--cceEEEEEEeEEEEEeCC--C--eeeEEEcCCcEEEEcCCCEEEEEEecceEEEEEE
Q 032303 81 WDWQ--VDQLVYIEEGEVRVVPEG--S--QRYMRFLAGDLIRYPKWFEADLFFNGPYQERYSF 137 (143)
Q Consensus 81 ~~y~--~dE~~yILEG~V~vt~d~--G--~~~~e~~AGDlv~fPkG~~gtW~V~e~vrK~Y~~ 137 (143)
+|++ .+|++|||+|++++..++ | +. +.+++||.++||+|..=.|.....-.+...+
T Consensus 65 ~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~-~~L~~GD~v~ip~g~~H~~~n~~~~~~~l~v 126 (350)
T 1juh_A 65 PHIHQKHYENFYCNKGSFQLWAQSGNETQQT-RVLSSGDYGSVPRNVTHTFQIQDPDTEMTGV 126 (350)
T ss_dssp CEECSSCEEEEEEEESEEEEEEEETTSCCEE-EEEETTCEEEECTTEEEEEEECSTTEEEEEE
T ss_pred cccCCCceEEEEEEEEEEEEEECCcCCceEE-EEECCCCEEEECCCCcEEEEeCCCCCEEEEE
Confidence 4554 689999999999999876 1 55 7999999999999999999886543344433
No 79
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=97.29 E-value=0.0011 Score=54.29 Aligned_cols=60 Identities=17% Similarity=0.303 Sum_probs=45.4
Q ss_pred eeeeeecCcee-eeeec--cceEEEEEEeEEEEEe--CCCe--eeEEEcCCcEEEEcCCCEEEEEEec
Q 032303 69 WSMWKTGKCKL-PWDWQ--VDQLVYIEEGEVRVVP--EGSQ--RYMRFLAGDLIRYPKWFEADLFFNG 129 (143)
Q Consensus 69 wgiWec~pg~f-~~~y~--~dE~~yILEG~V~vt~--d~G~--~~~e~~AGDlv~fPkG~~gtW~V~e 129 (143)
.....-.||.. +++++ .+|++|||+|+++++. ++|+ . .++++||.++||+|..-.+.-..
T Consensus 236 ~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~-~~l~~GD~~~ip~~~~H~~~n~~ 302 (361)
T 2vqa_A 236 GALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTVFASEGKASV-SRLQQGDVGYVPKGYGHAIRNSS 302 (361)
T ss_dssp EEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEEECSTTCEEE-EEECTTCEEEECTTCEEEEECCS
T ss_pred EEEEEECCCcccccccCCCCCEEEEEEeCEEEEEEEcCCCcEEE-EEECCCCEEEECCCCeEEeEECC
Confidence 34556667654 44554 4899999999999986 3454 5 79999999999999987776543
No 80
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=97.28 E-value=0.00028 Score=53.67 Aligned_cols=43 Identities=9% Similarity=0.109 Sum_probs=34.7
Q ss_pred eeeeccceEEEEEEeEEEEEeCCC------eeeEEEcCCcEEEEcCCCE
Q 032303 80 PWDWQVDQLVYIEEGEVRVVPEGS------QRYMRFLAGDLIRYPKWFE 122 (143)
Q Consensus 80 ~~~y~~dE~~yILEG~V~vt~d~G------~~~~e~~AGDlv~fPkG~~ 122 (143)
..|-+.||+++||+|+++|.-.++ ...++++||+++++|+|..
T Consensus 45 h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGve 93 (140)
T 3d0j_A 45 EIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECW 93 (140)
T ss_dssp EEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCE
T ss_pred ccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCcc
Confidence 345557999999999999998743 1237999999999999864
No 81
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=97.26 E-value=0.00044 Score=61.43 Aligned_cols=49 Identities=14% Similarity=0.348 Sum_probs=37.7
Q ss_pred cCcee---eeeeccceEEEEEEeEEEEEeCC--CeeeE--EEcCCcEEEEcCCCEE
Q 032303 75 GKCKL---PWDWQVDQLVYIEEGEVRVVPEG--SQRYM--RFLAGDLIRYPKWFEA 123 (143)
Q Consensus 75 ~pg~f---~~~y~~dE~~yILEG~V~vt~d~--G~~~~--e~~AGDlv~fPkG~~g 123 (143)
.||.+ .|+-.++|+.|||+|+++|+.-+ |...+ ++++||+++||+|+.-
T Consensus 366 ~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H 421 (496)
T 3ksc_A 366 HKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVPQNYAV 421 (496)
T ss_dssp ETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred eCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCCcEEEEEEecCCeEEEECCCCEE
Confidence 55554 34556899999999999987644 54423 5999999999999975
No 82
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=97.23 E-value=0.00026 Score=57.02 Aligned_cols=56 Identities=9% Similarity=0.061 Sum_probs=43.3
Q ss_pred ecCcee-eeee--ccceEEEEEEeEEEEEe--------CCCe-----------eeEEEcCCcEEEEcCCCEEEEEEecc
Q 032303 74 TGKCKL-PWDW--QVDQLVYIEEGEVRVVP--------EGSQ-----------RYMRFLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 74 c~pg~f-~~~y--~~dE~~yILEG~V~vt~--------d~G~-----------~~~e~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
-.||.. ++|+ ..+|++|||+|++++.. ++.. . +.++|||++++|+|..=.|.....
T Consensus 50 ~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~GD~i~iP~g~~H~~~N~~~ 127 (239)
T 2xlg_A 50 IPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYS-IQSEPKQLIYSPNHYMHGFVNPTD 127 (239)
T ss_dssp ECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEE-EECCTTEEEEECTTEEEEEECCSS
T ss_pred ECCCCcCCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeE-EEECCCCEEEECCCCCEEEEeCCC
Confidence 345542 3444 36899999999999987 4431 4 799999999999999999987665
No 83
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=97.19 E-value=0.00062 Score=60.05 Aligned_cols=50 Identities=20% Similarity=0.434 Sum_probs=37.8
Q ss_pred cCcee---eeeeccceEEEEEEeEEEEEeCC--Cee--eEEEcCCcEEEEcCCCEEE
Q 032303 75 GKCKL---PWDWQVDQLVYIEEGEVRVVPEG--SQR--YMRFLAGDLIRYPKWFEAD 124 (143)
Q Consensus 75 ~pg~f---~~~y~~dE~~yILEG~V~vt~d~--G~~--~~e~~AGDlv~fPkG~~gt 124 (143)
.||.+ .||-.++|+.|||+|+++|+.-+ |.. ..++++||+++||+|+.-.
T Consensus 331 ~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~ 387 (466)
T 3kgl_A 331 RQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIPQGFSVV 387 (466)
T ss_dssp ETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEE
T ss_pred ecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcEEEECCCCeEE
Confidence 45554 34555899999999999887643 443 1359999999999999753
No 84
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=97.13 E-value=0.00021 Score=49.85 Aligned_cols=52 Identities=12% Similarity=0.151 Sum_probs=38.2
Q ss_pred eeeecCcee-eeeeccce--EEEEEEeEEEEEeCCCe-eeEEEcCCcEEEEcCCCE
Q 032303 71 MWKTGKCKL-PWDWQVDQ--LVYIEEGEVRVVPEGSQ-RYMRFLAGDLIRYPKWFE 122 (143)
Q Consensus 71 iWec~pg~f-~~~y~~dE--~~yILEG~V~vt~d~G~-~~~e~~AGDlv~fPkG~~ 122 (143)
.|.=.||.. .|+.+..| ++++++|++++..+||+ ....++|||.+++|+|..
T Consensus 21 ~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~~~dG~~~~~~l~aGd~~~~p~G~~ 76 (98)
T 2ozi_A 21 EWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQ 76 (98)
T ss_dssp EEEECTTEECCSEECCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCE
T ss_pred EEEECCCCccCcEeCCCCEEEEEEeeEEEEEEeCCCcEEEEEECCCCEEEECCCCc
Confidence 355567764 57777544 44557999999998886 226899999999999965
No 85
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=97.12 E-value=0.0017 Score=56.30 Aligned_cols=58 Identities=17% Similarity=0.288 Sum_probs=44.5
Q ss_pred eeeeecCcee--eeeeccceEEEEEEeEEEEEe--CCCeeeEEEcCCcEEEEcCCCEEEEEE
Q 032303 70 SMWKTGKCKL--PWDWQVDQLVYIEEGEVRVVP--EGSQRYMRFLAGDLIRYPKWFEADLFF 127 (143)
Q Consensus 70 giWec~pg~f--~~~y~~dE~~yILEG~V~vt~--d~G~~~~e~~AGDlv~fPkG~~gtW~V 127 (143)
..=.-.|+.+ |.+.+.+|++||++|+++++- .++.....+++||+++||+|+.--|.-
T Consensus 47 ~~~~l~p~gl~~Phh~~A~ei~yV~~G~g~~g~V~~~~~~~~~l~~GDv~~~P~G~~h~~~N 108 (418)
T 3s7i_A 47 VQIEAKPNTLVLPKHADADNILVIQQGQATVTVANGNNRKSFNLDEGHALRIPSGFISYILN 108 (418)
T ss_dssp EEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEEECTTCEEEEEE
T ss_pred EEEEecCCceeeeeeCCCCeEEEEEEeeEEEEEEecCCEEEEEecCCCEEEECCCCeEEEEe
Confidence 3455668876 555578999999999997775 344444899999999999999855555
No 86
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=97.12 E-value=0.001 Score=58.64 Aligned_cols=52 Identities=15% Similarity=0.261 Sum_probs=38.2
Q ss_pred cCcee---eeeeccceEEEEEEeEEEEEeCC--CeeeE--EEcCCcEEEEcCCCEEEEEE
Q 032303 75 GKCKL---PWDWQVDQLVYIEEGEVRVVPEG--SQRYM--RFLAGDLIRYPKWFEADLFF 127 (143)
Q Consensus 75 ~pg~f---~~~y~~dE~~yILEG~V~vt~d~--G~~~~--e~~AGDlv~fPkG~~gtW~V 127 (143)
.||.. .|+-.++|+.||++|+++|+.-+ |...+ ++++||+++||+|+. .+.+
T Consensus 331 ~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~GDVfvvP~g~~-h~~~ 389 (465)
T 3qac_A 331 YRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSRGQLVVVPQNFA-IVKQ 389 (465)
T ss_dssp CTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCE-EEEE
T ss_pred cCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecCCeEEEECCCcE-EEEE
Confidence 55554 45555899999999999877643 44323 489999999999995 4443
No 87
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=97.08 E-value=0.0035 Score=45.98 Aligned_cols=64 Identities=20% Similarity=0.127 Sum_probs=53.1
Q ss_pred ecCce--eeeeeccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecceEEEEEEEe
Q 032303 74 TGKCK--LPWDWQVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGPYQERYSFRA 139 (143)
Q Consensus 74 c~pg~--f~~~y~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~vrK~Y~~~a 139 (143)
-.||. |.+.....|.+.|++|+++|.-.+.+.-.+|.||+.|.+|++-+=.-+|.++. .|....
T Consensus 44 m~PGe~~YtF~T~~~E~MevvsG~l~V~Lpg~~eW~~~~aGesF~VpanssF~lkv~~~~--~Y~C~y 109 (111)
T 3hqx_A 44 ILPTEQPLTFETHVPERMEIISGECRVKIADSTESELFRAGQSFYVPGNSLFKIETDEVL--DYVCHL 109 (111)
T ss_dssp ECCCSSCEEEECSSCEEEEEEESEEEEEETTCSSCEEEETTCEEEECTTCEEEEECSSCE--EEEEEE
T ss_pred EeccccceEEcCCCcEEEEEEEeEEEEEcCCcccCEEeCCCCEEEECCCCcEEEEECcce--eEEEEc
Confidence 35788 77777899999999999999999876668999999999999998888887643 455543
No 88
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=97.01 E-value=0.0011 Score=55.65 Aligned_cols=60 Identities=20% Similarity=0.185 Sum_probs=46.2
Q ss_pred ceeeeeecCcee-eeee-ccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEe
Q 032303 68 RWSMWKTGKCKL-PWDW-QVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFN 128 (143)
Q Consensus 68 ~wgiWec~pg~f-~~~y-~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~ 128 (143)
........||.. +.+. ...|+.|||+|+.+++.-+|+. ..+++||+++||+|..=.+.-.
T Consensus 101 ~~~~~~l~PG~~~~~H~H~~~e~~yVl~G~g~~t~v~g~~-~~l~~GD~~~iP~g~~H~~~n~ 162 (354)
T 2d40_A 101 YAGLQLIMPGEVAPSHRHNQSALRFIVEGKGAFTAVDGER-TPMNEGDFILTPQWRWHDHGNP 162 (354)
T ss_dssp EEEEEEECTTCEEEEEEESSCEEEEEEECSSCEEEETTEE-EECCTTCEEEECTTSCEEEECC
T ss_pred EEEEEEECCCCCcCCeecCcceEEEEEEEEEEEEEECCEE-EEEcCCCEEEECCCCcEEeEeC
Confidence 345677788865 3444 3689999999999885556677 7999999999999987655544
No 89
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=96.97 E-value=0.00027 Score=48.94 Aligned_cols=52 Identities=13% Similarity=0.179 Sum_probs=38.9
Q ss_pred eeecCcee-eeeec--cceEEEEEEeEEEEEeCCCee-eEEEcCCcEEEEcCCCEE
Q 032303 72 WKTGKCKL-PWDWQ--VDQLVYIEEGEVRVVPEGSQR-YMRFLAGDLIRYPKWFEA 123 (143)
Q Consensus 72 Wec~pg~f-~~~y~--~dE~~yILEG~V~vt~d~G~~-~~e~~AGDlv~fPkG~~g 123 (143)
|.=.||.- +|+.+ ..|+.+|++|+++|+.+||.. ..++.+||.+++|+|..=
T Consensus 22 ~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~~d~~~~~~~l~~G~~~~ip~G~~H 77 (98)
T 3lag_A 22 WRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQH 77 (98)
T ss_dssp EEECTTEECCSEECCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEE
T ss_pred EEECCCCccCcEECCCcEEEEEEeccEEEEEeCCCceEEEEecCCcEEEEcCCCcE
Confidence 55567763 56655 468888999999999988753 256899999999999753
No 90
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=96.96 E-value=0.0012 Score=56.87 Aligned_cols=55 Identities=15% Similarity=0.174 Sum_probs=40.5
Q ss_pred cCcee---eeeeccceEEEEEEeEEEEEeCC--------Cee--eEEEcCCcEEEEcCCCEEEEEEec
Q 032303 75 GKCKL---PWDWQVDQLVYIEEGEVRVVPEG--------SQR--YMRFLAGDLIRYPKWFEADLFFNG 129 (143)
Q Consensus 75 ~pg~f---~~~y~~dE~~yILEG~V~vt~d~--------G~~--~~e~~AGDlv~fPkG~~gtW~V~e 129 (143)
.||.+ .|+-..+|+.||++|+++++.-+ |.. ..++++||+++||+|+.-.+.-.+
T Consensus 247 ~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~GDV~vvP~G~~h~~~n~~ 314 (397)
T 2phl_A 247 EEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSKDDVFVIPAAYPVAIKATS 314 (397)
T ss_dssp CTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEETTCEEEECTTCCEEEEESS
T ss_pred cCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecCCCEEEECCCCeEEEEeCC
Confidence 45555 34445899999999998887653 321 367999999999999976665554
No 91
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=96.94 E-value=0.0027 Score=50.20 Aligned_cols=45 Identities=20% Similarity=0.068 Sum_probs=39.6
Q ss_pred ccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecc
Q 032303 84 QVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 84 ~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
...|+.|||||++.++.+ |+. ++++|||.++++++-.-.|.-..+
T Consensus 185 ~~ee~~~vLeG~~~~~~~-~~~-~~l~~GD~~~~~~~~pH~~~n~g~ 229 (246)
T 1sfn_A 185 YMEHGLLMLEGEGLYKLE-ENY-YPVTAGDIIWMGAHCPQWYGALGR 229 (246)
T ss_dssp SSCEEEEEEECEEEEEET-TEE-EEEETTCEEEECTTCCEEEEEESS
T ss_pred CceEEEEEEECEEEEEEC-CEE-EEcCCCCEEEECCCCCEEEEcCCC
Confidence 467999999999999986 555 799999999999999999988665
No 92
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=96.92 E-value=0.0018 Score=53.55 Aligned_cols=59 Identities=15% Similarity=0.205 Sum_probs=43.6
Q ss_pred eeeeecCcee-eeeec--cceEEEEEEeEEEEEeC--CCe-eeEEEcCCcEEEEcCCCEEEEEEe
Q 032303 70 SMWKTGKCKL-PWDWQ--VDQLVYIEEGEVRVVPE--GSQ-RYMRFLAGDLIRYPKWFEADLFFN 128 (143)
Q Consensus 70 giWec~pg~f-~~~y~--~dE~~yILEG~V~vt~d--~G~-~~~e~~AGDlv~fPkG~~gtW~V~ 128 (143)
....-.||.. +++++ .+|++|||+|+++++.+ +|+ ...++++||.++||+|..=.+.-.
T Consensus 260 ~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~ 324 (385)
T 1j58_A 260 ALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDGHARTFNYQAGDVGYVPFAMGHYVENI 324 (385)
T ss_dssp EEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEETTEEEEEEEESSCEEEECTTCBEEEEEC
T ss_pred EEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcCCCcEEEEEEcCCCEEEECCCCeEEEEEC
Confidence 3445567654 34554 38999999999998864 442 337999999999999988777654
No 93
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=96.92 E-value=0.0013 Score=56.64 Aligned_cols=58 Identities=12% Similarity=0.148 Sum_probs=40.8
Q ss_pred eecCcee---eeeeccceEEEEEEeEEEEEeC--CCe-------------eeE--EEcCCcEEEEcCCCEEEEEEecc
Q 032303 73 KTGKCKL---PWDWQVDQLVYIEEGEVRVVPE--GSQ-------------RYM--RFLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 73 ec~pg~f---~~~y~~dE~~yILEG~V~vt~d--~G~-------------~~~--e~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
.-.||.. .|+-..+|+.||++|+++++.- +|. ..+ ++++||+++||+|+.-...-.++
T Consensus 255 ~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~~~ 332 (416)
T 1uij_A 255 DINEGALLLPHFNSKAIVILVINEGDANIELVGIKEQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNATSN 332 (416)
T ss_dssp EECTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC------------CCEEEEEEEEETTCEEEECTTCCEEEEESSS
T ss_pred EEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcCCCccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcCCC
Confidence 3456665 3444589999999999888543 331 124 89999999999999776655544
No 94
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=96.91 E-value=0.0032 Score=52.79 Aligned_cols=44 Identities=18% Similarity=0.327 Sum_probs=35.0
Q ss_pred cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecc
Q 032303 85 VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 85 ~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
..|+.||++|+.+++.+ |+. .++++||++++|+|..-.-+..++
T Consensus 288 ~~ev~~v~~G~g~~~v~-~~~-~~~~~GD~~~vP~~~~H~~~n~e~ 331 (354)
T 2d40_A 288 DSTIYHVVEGSGQVIIG-NET-FSFSAKDIFVVPTWHGVSFQTTQD 331 (354)
T ss_dssp SCEEEEEEEEEEEEEET-TEE-EEEETTCEEEECTTCCEEEEEEEE
T ss_pred CcEEEEEEeCeEEEEEC-CEE-EEEcCCCEEEECCCCeEEEEeCCC
Confidence 34999999999999994 566 899999999999986544443333
No 95
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=96.87 E-value=0.0031 Score=54.34 Aligned_cols=70 Identities=21% Similarity=0.234 Sum_probs=51.5
Q ss_pred HHhhcCCCceeeeeecCcee--eeeeccceEEEEEEeEEEEEe--CCCeeeEEEcCCcE------EEEcCCCEEEEEEec
Q 032303 60 RLKELDVSRWSMWKTGKCKL--PWDWQVDQLVYIEEGEVRVVP--EGSQRYMRFLAGDL------IRYPKWFEADLFFNG 129 (143)
Q Consensus 60 rl~~lGv~~wgiWec~pg~f--~~~y~~dE~~yILEG~V~vt~--d~G~~~~e~~AGDl------v~fPkG~~gtW~V~e 129 (143)
.|.-+|-.+...-.-.||.+ +++.+.+|+.|||+|+++++. .++.....+++||+ ++||+|+.--+.-..
T Consensus 45 ~l~~~~~~s~~~~~l~pgg~~~ph~~~a~ei~yVl~G~~~v~~v~~~~~~~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g 124 (397)
T 2phl_A 45 RLQNLEDYRLVEFRSKPETLLLPQQADAELLLVVRSGSAILVLVKPDDRREYFFLTSDNPIFSDHQKIPAGTIFYLVNPD 124 (397)
T ss_dssp GGGGGTTCEEEEEEECSSEEEEEEEESEEEEEEEEESEEEEEEEETTTEEEEEEEESSCTTSCSEEEECTTCEEEEEECC
T ss_pred hhcccccEEEEEEEECCCcCccCEecCCCeEEEEEeeeEEEEEEeCCCcEEEEECCCCcccccceEEECCCCcEEEEeCC
Confidence 44445633555677788887 444468999999999999885 33444479999999 999999987665433
No 96
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=96.85 E-value=0.0059 Score=53.47 Aligned_cols=73 Identities=15% Similarity=0.166 Sum_probs=52.1
Q ss_pred CCHHHHhhcCCCceeeeeecCceee-eee-ccceEEEEEEeEEEEEeC--CCe----------------------eeEEE
Q 032303 56 VSPERLKELDVSRWSMWKTGKCKLP-WDW-QVDQLVYIEEGEVRVVPE--GSQ----------------------RYMRF 109 (143)
Q Consensus 56 ps~~rl~~lGv~~wgiWec~pg~f~-~~y-~~dE~~yILEG~V~vt~d--~G~----------------------~~~e~ 109 (143)
+....|.-+|+ +.-.-.-.||.+. -+| +.+|++|||+|++.++.. ++. ....|
T Consensus 53 ~~~~~l~~~gv-s~~r~~i~pggl~~Ph~h~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~d~~q~~~~l 131 (459)
T 2e9q_A 53 QDNDEFQCAGV-NMIRHTIRPKGLLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQKIRPF 131 (459)
T ss_dssp TTSHHHHHHTE-EEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEEECCCEEE
T ss_pred CCChhhccCce-EEEEEEEcCCCEecceecCCceEEEEEeeEEEEEEEeCCCcchhccchhhccccccccccccceeEEe
Confidence 44456666776 3334556888862 344 589999999999999864 321 12589
Q ss_pred cCCcEEEEcCCCEEEEEEec
Q 032303 110 LAGDLIRYPKWFEADLFFNG 129 (143)
Q Consensus 110 ~AGDlv~fPkG~~gtW~V~e 129 (143)
++||+++||+|..--|.-.+
T Consensus 132 ~~GDv~~iPaG~~H~~~N~g 151 (459)
T 2e9q_A 132 REGDLLVVPAGVSHWMYNRG 151 (459)
T ss_dssp ETTEEEEECTTCCEEEEECS
T ss_pred cCCCEEEECCCCCEEEEeCC
Confidence 99999999999987666554
No 97
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=96.81 E-value=0.0015 Score=56.64 Aligned_cols=55 Identities=15% Similarity=0.210 Sum_probs=38.6
Q ss_pred eecCcee---eeeeccceEEEEEEeEEEEEeCC--C----------ee--eE--EEcCCcEEEEcCCCEEEEEE
Q 032303 73 KTGKCKL---PWDWQVDQLVYIEEGEVRVVPEG--S----------QR--YM--RFLAGDLIRYPKWFEADLFF 127 (143)
Q Consensus 73 ec~pg~f---~~~y~~dE~~yILEG~V~vt~d~--G----------~~--~~--e~~AGDlv~fPkG~~gtW~V 127 (143)
.-.||.. .|+-..+|+.||++|+++++.-+ | .. .+ ++++||+++||+|+.-.-.-
T Consensus 272 ~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n 345 (434)
T 2ea7_A 272 DMKEGALLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINA 345 (434)
T ss_dssp EECTTEEEEEEEESSCEEEEEEEESCEEEEEEEEEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEE
T ss_pred EEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEecCccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEc
Confidence 3356665 34445899999999998886542 2 21 24 78999999999998654433
No 98
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=96.76 E-value=0.002 Score=55.59 Aligned_cols=59 Identities=12% Similarity=0.003 Sum_probs=46.2
Q ss_pred ceeeeeecCcee-eeeec-cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEE
Q 032303 68 RWSMWKTGKCKL-PWDWQ-VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFF 127 (143)
Q Consensus 68 ~wgiWec~pg~f-~~~y~-~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V 127 (143)
...++.-.||.- +.+.+ ..|+.|||+|+..++..+|+. +++++||++++|.|..=.-.-
T Consensus 124 ~a~~~~l~PG~~~~~HrH~~~ev~~IleG~G~~t~v~G~~-~~~~~GD~i~~P~g~~H~~~N 184 (394)
T 3bu7_A 124 FSGIQTMKAGERAGAHRHAASALRFIMEGSGAYTIVDGHK-VELGANDFVLTPNGTWHEHGI 184 (394)
T ss_dssp EEEEEEECTTCBCCCEEESSCEEEEEEECSCEEEEETTEE-EEECTTCEEEECTTCCEEEEE
T ss_pred EEEEEEECCCCCcCCccCCcceEEEEEEeeEEEEEECCEE-EEEcCCCEEEECcCCCEEEEc
Confidence 347788888874 44543 579999999999887778888 899999999999987544333
No 99
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=96.73 E-value=0.002 Score=55.22 Aligned_cols=59 Identities=19% Similarity=0.229 Sum_probs=46.0
Q ss_pred ceeeeeecCcee-eeeec-cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEE
Q 032303 68 RWSMWKTGKCKL-PWDWQ-VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFF 127 (143)
Q Consensus 68 ~wgiWec~pg~f-~~~y~-~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V 127 (143)
..+++.-.||.- +.+.+ ..|++|||+|+..++..||+. +++++||+|++|.|..=...-
T Consensus 104 ~a~~~~l~PG~~~~~HrH~~~ev~~VleG~G~~~~vdG~~-~~~~~GD~v~iP~g~~H~~~N 164 (368)
T 3nw4_A 104 WAAIQYLGPRETAPEHRHSQNAFRFVVEGEGVWTVVNGDP-VRMSRGDLLLTPGWCFHGHMN 164 (368)
T ss_dssp EEEEEEECTTCEEEEEEESSCEEEECSSCEEEEEEETTEE-EEEETTCEEEECTTCCEEEEE
T ss_pred EEEEEEECCCCccCceecccceEEEEEecceEEEEECCEE-EEEeCCCEEEECCCCcEEeEe
Confidence 467888899874 34433 579999999999755557777 899999999999998654444
No 100
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=96.68 E-value=0.032 Score=49.00 Aligned_cols=83 Identities=18% Similarity=0.142 Sum_probs=56.6
Q ss_pred cCCCHHHHhhcCCCceeeeeecCceee-eee-ccceEEEEEEeEEEEEeCC--Ce-----------------------ee
Q 032303 54 RQVSPERLKELDVSRWSMWKTGKCKLP-WDW-QVDQLVYIEEGEVRVVPEG--SQ-----------------------RY 106 (143)
Q Consensus 54 ~~ps~~rl~~lGv~~wgiWec~pg~f~-~~y-~~dE~~yILEG~V~vt~d~--G~-----------------------~~ 106 (143)
-++....|..+|+. .-.-.-.|+.+. -+| +.+|++|||+|++.++..+ +. ..
T Consensus 36 ~~~~~~~l~~~gvs-~~r~~l~Pggl~~Ph~~~a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~d~~qk~ 114 (476)
T 1fxz_A 36 WNPNNKPFQCAGVA-LSRCTLNRNALRRPSYTNGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSRPQDRHQKI 114 (476)
T ss_dssp CCTTSHHHHHHTCE-EEEEEECTTEEEEEEEESSCEEEEEEECCEEEEEECTTCCCC------------------CCCCE
T ss_pred eCCCChhhccCceE-EEEEEEcCCCEecceecCCceEEEEEecEEEEEEEcCCCcchhhccccccccccccccccccceE
Confidence 34455677777873 334466788873 344 5899999999998887653 11 13
Q ss_pred EEEcCCcEEEEcCCCEEEEEEec--ceEEEEEE
Q 032303 107 MRFLAGDLIRYPKWFEADLFFNG--PYQERYSF 137 (143)
Q Consensus 107 ~e~~AGDlv~fPkG~~gtW~V~e--~vrK~Y~~ 137 (143)
..|++||+++||+|..--|.-.+ +++=..+|
T Consensus 115 ~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~ 147 (476)
T 1fxz_A 115 YNFREGDLIAVPTGVAWWMYNNEDTPVVAVSII 147 (476)
T ss_dssp EEECTTEEEEECTTCEEEEEECSSSCEEEEEEE
T ss_pred EEEeCCCEEEECCCCcEEEEeCCCCCEEEEEEe
Confidence 68999999999999876665554 34444444
No 101
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=96.68 E-value=0.0022 Score=55.79 Aligned_cols=51 Identities=20% Similarity=0.295 Sum_probs=35.9
Q ss_pred eecCcee---eeeeccceEEEEEEeEEEEEeC--CCe--------e----eEEEcCCcEEEEcCCCEE
Q 032303 73 KTGKCKL---PWDWQVDQLVYIEEGEVRVVPE--GSQ--------R----YMRFLAGDLIRYPKWFEA 123 (143)
Q Consensus 73 ec~pg~f---~~~y~~dE~~yILEG~V~vt~d--~G~--------~----~~e~~AGDlv~fPkG~~g 123 (143)
.-.||.. .|+-..+|+.||++|++++..- +|. . ..++++||+++||+|+.-
T Consensus 287 ~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h 354 (445)
T 2cav_A 287 QMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQQQQQGLESMQLRRYAATLSEGDIIVIPSSFPV 354 (445)
T ss_dssp EECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC-----------CCEEEEEEECTTCEEEECTTCCE
T ss_pred EeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeCCCcccccccCcceEEEEeEecCCcEEEEcCCcEE
Confidence 3456665 3444589999999998877653 321 1 356999999999999754
No 102
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=96.67 E-value=0.019 Score=50.65 Aligned_cols=73 Identities=15% Similarity=0.119 Sum_probs=52.2
Q ss_pred CCHHHHhhcCCCceeeeeecCceee-eee-ccceEEEEEEeEEEEEeCC--C-----------------e---------e
Q 032303 56 VSPERLKELDVSRWSMWKTGKCKLP-WDW-QVDQLVYIEEGEVRVVPEG--S-----------------Q---------R 105 (143)
Q Consensus 56 ps~~rl~~lGv~~wgiWec~pg~f~-~~y-~~dE~~yILEG~V~vt~d~--G-----------------~---------~ 105 (143)
+...-|..+|+ +.-.-.-.||.+. -+| +..|++||++|+..++... + . .
T Consensus 35 ~~~~~l~~~gv-~~~r~~i~pggl~~Ph~~~~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~~~~~d~~qk 113 (493)
T 2d5f_A 35 SQHPELQCAGV-TVSKRTLNRNGLHLPSYSPYPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQQLQDSHQK 113 (493)
T ss_dssp TTSHHHHHHTC-EEEEEEECTTEEEEEEECSSCEEEEEEECEEEEEECCTTCCCCEEECC-------------CSEEESC
T ss_pred CCChhhccCCE-EEEEEEeCCCcEeCceecCCCeEEEEEeCEEEEEEEeCCCccccccccccccccccccccccccccce
Confidence 34456667786 4445667888873 345 4799999999999997652 1 0 1
Q ss_pred eEEEcCCcEEEEcCCCEEEEEEec
Q 032303 106 YMRFLAGDLIRYPKWFEADLFFNG 129 (143)
Q Consensus 106 ~~e~~AGDlv~fPkG~~gtW~V~e 129 (143)
...|++||+++||+|..--|.-..
T Consensus 114 v~~l~~GDvi~iPaG~~h~~~N~g 137 (493)
T 2d5f_A 114 IRHFNEGDVLVIPPGVPYWTYNTG 137 (493)
T ss_dssp EEEEETTEEEEECTTCCEEEEECS
T ss_pred EEEecCCCEEEECCCCcEEEEeCC
Confidence 368999999999999976665543
No 103
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=96.62 E-value=0.017 Score=50.92 Aligned_cols=80 Identities=18% Similarity=0.207 Sum_probs=52.0
Q ss_pred CCHHHHhhcCCCceeeeeecCcee-eeee-ccceEEEEEEeEEEEEe--CCC-ee-------------------------
Q 032303 56 VSPERLKELDVSRWSMWKTGKCKL-PWDW-QVDQLVYIEEGEVRVVP--EGS-QR------------------------- 105 (143)
Q Consensus 56 ps~~rl~~lGv~~wgiWec~pg~f-~~~y-~~dE~~yILEG~V~vt~--d~G-~~------------------------- 105 (143)
+....|.-+|+. .-.=.-.|+.+ .-+| ...|++||++|+..+.. .+. +.
T Consensus 40 ~~~~~l~~~gvs-~~R~~i~P~gl~~Ph~h~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~~~~~~~~~~~~~ 118 (465)
T 3qac_A 40 SNEQEFRCAGVS-VIRRTIEPHGLLLPSFTSAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGEDERIREQGSRKFG 118 (465)
T ss_dssp TTSHHHHHHTCE-EEEEEECTTEEEEEEEESSCEEEEEEECEEEEEEECTTCCCCC------------------------
T ss_pred CCChhhcccceE-EEEEEEcCCcCcccEEcCCCEEEEEEECcEEEEEecCCCCceeecchhccccccccccccccccccc
Confidence 444567667874 22334477776 2233 68999999999998773 221 11
Q ss_pred ------------eEEEcCCcEEEEcCCCEEEEEEe---cceEEEEEE
Q 032303 106 ------------YMRFLAGDLIRYPKWFEADLFFN---GPYQERYSF 137 (143)
Q Consensus 106 ------------~~e~~AGDlv~fPkG~~gtW~V~---e~vrK~Y~~ 137 (143)
...|++||+++||+|.. .|-.. +++.=+..+
T Consensus 119 ~~~~~~~d~hqk~~~~~~GDvi~iPaG~~-hw~~N~G~~~lv~v~~~ 164 (465)
T 3qac_A 119 MRGDRFQDQHQKIRHLREGDIFAMPAGVS-HWAYNNGDQPLVAVILI 164 (465)
T ss_dssp ------CCCCCCEEEEETTEEEEECTTCE-EEEECCSSSCEEEEEEE
T ss_pred cccccccccccceeeecCCCEEEECCCCe-EEEEcCCCCCEEEEEEE
Confidence 24899999999999986 66554 344444443
No 104
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=96.52 E-value=0.013 Score=51.90 Aligned_cols=72 Identities=11% Similarity=0.152 Sum_probs=60.2
Q ss_pred ceeeeeecCc---eeeeeeccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecceEEEEEEEeccC
Q 032303 68 RWSMWKTGKC---KLPWDWQVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGPYQERYSFRAYGD 142 (143)
Q Consensus 68 ~wgiWec~pg---~f~~~y~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~vrK~Y~~~a~~~ 142 (143)
...+|.|..+ .+-+.-+.||++++-+|+..|..+=|. .++++||.++||.|.+=++++.++ -.-|++-.||.
T Consensus 158 aI~~y~~n~sM~~~~f~NaDGD~Livpq~G~l~i~TEfG~--L~v~pgei~VIPRGi~frv~l~~p-~Rgyi~E~~g~ 232 (471)
T 1eyb_A 158 AIHIFLCNTSMENRCFYNSDGDFLIVPQKGNLLIYTEFGK--MLVQPNEICVIQRGMRFSIDVFEE-TRGYILEVYGV 232 (471)
T ss_dssp EEEEEEECSCCCSEEEEESSEEEEEEEEESCEEEEETTEE--EEECTTEEEEECTTCCEEEECSSS-EEEEEEEEESC
T ss_pred EEEEEeCCCCcccceeecCCCCEEEEEEeCCEEEEEeccc--EEeccCCEEEECCccEEEEeeCCC-ceEEEEEccCC
Confidence 4567888766 344566789999999999999999998 799999999999999999999884 45688877774
No 105
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=96.41 E-value=0.0044 Score=53.44 Aligned_cols=51 Identities=12% Similarity=0.176 Sum_probs=38.1
Q ss_pred cCcee-eeee-ccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEE
Q 032303 75 GKCKL-PWDW-QVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFF 127 (143)
Q Consensus 75 ~pg~f-~~~y-~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V 127 (143)
.||.- +.+. ..+|++|||||+..++. ||+. .++++||+|++|+|..=...-
T Consensus 302 ~PG~~~~~HrH~~~~v~~VleG~G~~~V-~ge~-~~~~~GD~~~iP~g~~H~~~N 354 (394)
T 3bu7_A 302 RPGEHTKAHRHTGNVIYNVAKGQGYSIV-GGKR-FDWSEHDIFCVPAWTWHEHCN 354 (394)
T ss_dssp CTTCBCCCEEESSCEEEEEEECCEEEEE-TTEE-EEECTTCEEEECTTCCEEEEE
T ss_pred CCCCcCCCcccCCcEEEEEEeCeEEEEE-CCEE-EEEeCCCEEEECCCCeEEeEe
Confidence 56554 2233 36799999999998877 5666 799999999999996644443
No 106
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=96.17 E-value=0.0074 Score=48.81 Aligned_cols=64 Identities=14% Similarity=0.241 Sum_probs=45.0
Q ss_pred eeecCcee-ee--eeccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecc--eEEEEEE
Q 032303 72 WKTGKCKL-PW--DWQVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGP--YQERYSF 137 (143)
Q Consensus 72 Wec~pg~f-~~--~y~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~--vrK~Y~~ 137 (143)
-.=.||.. ++ +-...|..|||||+..++.+ |+. ++++|||.++++.|-.-...-..+ ++=.+..
T Consensus 196 ~~l~pG~~i~~~~~h~~e~~~~il~G~~~~~~~-~~~-~~v~~GD~~~~~~~~~h~~~n~g~~~~~yl~~~ 264 (278)
T 1sq4_A 196 VNFEPGGVIPFAETHVMEHGLYVLEGKAVYRLN-QDW-VEVEAGDFMWLRAFCPQACYSGGPGRFRYLLYK 264 (278)
T ss_dssp EEECSSSEESCCCCCSEEEEEEEEECEEEEEET-TEE-EEEETTCEEEEEESCCEEEECCSSSCEEEEEEE
T ss_pred EEECCCCCcCCCCCCCccEEEEEEeCEEEEEEC-CEE-EEeCCCCEEEECCCCCEEEEcCCCCCEEEEEEE
Confidence 34456653 33 12246899999999999986 555 799999999999998877665443 4444444
No 107
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=96.14 E-value=0.044 Score=48.61 Aligned_cols=71 Identities=21% Similarity=0.282 Sum_probs=48.7
Q ss_pred CCHHHHhhcCCCceeeeeecCcee--eeeeccceEEEEEEeEEEEEeC--C-Cee---------------------eEEE
Q 032303 56 VSPERLKELDVSRWSMWKTGKCKL--PWDWQVDQLVYIEEGEVRVVPE--G-SQR---------------------YMRF 109 (143)
Q Consensus 56 ps~~rl~~lGv~~wgiWec~pg~f--~~~y~~dE~~yILEG~V~vt~d--~-G~~---------------------~~e~ 109 (143)
+...-|.-+|+. ...=.-.|+.+ |.+....|++||++|+..+.-- + .+. ...|
T Consensus 36 ~~~~~L~~~gvs-~~R~~i~pggl~lPh~~~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~~~d~~qk~~~l 114 (496)
T 3ksc_A 36 PNNKQFRCAGVA-LSRATLQRNALRRPYYSNAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDRHQKVNRF 114 (496)
T ss_dssp TTSHHHHHHTCE-EEEEEECTTEEEEEEEESSCEEEEEEECCEEEEEECTTCCCC---------------CCCCCCEEEE
T ss_pred ccchhhccCCce-EEEEEecCCCEeCceEcCCCEEEEEEeCceEEEEEeCCCCccchhhhhcccccccccccchheeecc
Confidence 344567778873 33344478876 3333689999999999877652 2 121 2489
Q ss_pred cCCcEEEEcCCCEEEEEEe
Q 032303 110 LAGDLIRYPKWFEADLFFN 128 (143)
Q Consensus 110 ~AGDlv~fPkG~~gtW~V~ 128 (143)
++||+++||+|+. .|-+.
T Consensus 115 ~~GDV~viPaG~~-h~~~N 132 (496)
T 3ksc_A 115 REGDIIAVPTGIV-FWMYN 132 (496)
T ss_dssp CTTEEEEECTTCE-EEEEE
T ss_pred CCCCEEEECCCCc-EEEEc
Confidence 9999999999976 55554
No 108
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=96.03 E-value=0.012 Score=43.23 Aligned_cols=51 Identities=10% Similarity=0.011 Sum_probs=37.1
Q ss_pred eeecCc-eeeeeec-cceEEEEEEeEEEEEeCCCeee--EEEcCCcEEEEcCCCEEE
Q 032303 72 WKTGKC-KLPWDWQ-VDQLVYIEEGEVRVVPEGSQRY--MRFLAGDLIRYPKWFEAD 124 (143)
Q Consensus 72 Wec~pg-~f~~~y~-~dE~~yILEG~V~vt~d~G~~~--~e~~AGDlv~fPkG~~gt 124 (143)
..-.|| .++.|.+ ..|..|||+|+.... +|... ..++|||.++.|+|..=.
T Consensus 49 ~~~~pG~~~p~H~H~~~ee~~VL~G~~~~~--~g~~~~~~~~~~Gd~~~~p~g~~H~ 103 (145)
T 2o1q_A 49 FDCPAGSSFAAHVHVGPGEYFLTKGKMDVR--GGKAAGGDTAIAPGYGYESANARHD 103 (145)
T ss_dssp EEECTTEEECCEEESSCEEEEEEEEEEEET--TCGGGTSEEEESSEEEEECTTCEES
T ss_pred EEECCCCCCCccCCCCCEEEEEEEeEEEEc--CCCEecceEeCCCEEEEECcCCccC
Confidence 444555 4566665 577799999999954 33321 589999999999998766
No 109
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=96.00 E-value=0.026 Score=43.78 Aligned_cols=54 Identities=7% Similarity=0.038 Sum_probs=42.6
Q ss_pred eeeeeec-cceEEEEEEeEEEEEeCCC-e-eeEEEcCCcEEEEcCCCEEEEEEe----cceEE
Q 032303 78 KLPWDWQ-VDQLVYIEEGEVRVVPEGS-Q-RYMRFLAGDLIRYPKWFEADLFFN----GPYQE 133 (143)
Q Consensus 78 ~f~~~y~-~dE~~yILEG~V~vt~d~G-~-~~~e~~AGDlv~fPkG~~gtW~V~----e~vrK 133 (143)
.|+.++. .-|+++|++|+++ ..++. . . .++.+||++++|+|-.-.|... ++.+-
T Consensus 21 ~~~~~~~~~~~i~~v~~G~~~-~i~~~~~~~-~~l~~g~l~~i~p~~~h~~~~~~~~~~~~~~ 81 (276)
T 3gbg_A 21 IFNNLYINDYKMFWIDSGIAK-LIDKNCLVS-YEINSSSIILLKKNSIQRFSLTSLSDENINV 81 (276)
T ss_dssp EEEEEECSSCEEEEESSSCEE-EEETTTTEE-EEECTTEEEEECTTCEEEEEEEECCSSCEEE
T ss_pred hccHhhhcceEEEEEecCceE-EECCcccee-EEEcCCCEEEEcCCCceeeccccCCCcceEE
Confidence 3455654 6899999999999 76655 1 4 7999999999999999988887 55543
No 110
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=95.96 E-value=0.022 Score=48.79 Aligned_cols=44 Identities=23% Similarity=0.352 Sum_probs=36.8
Q ss_pred cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecc
Q 032303 85 VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 85 ~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
..+++||+||+..++.++ +. .++++||+|++|.|..-...-.++
T Consensus 299 ~s~Vy~V~eG~G~~~I~~-~~-~~w~~gD~fvvP~w~~h~~~n~~~ 342 (368)
T 3nw4_A 299 GSTVFQVFEGAGAVVMNG-ET-TKLEKGDMFVVPSWVPWSLQAETQ 342 (368)
T ss_dssp SCEEEEEEESCEEEEETT-EE-EEECTTCEEEECTTCCEEEEESSS
T ss_pred ccEEEEEEeCcEEEEECC-EE-EEecCCCEEEECCCCcEEEEeCCC
Confidence 579999999999999865 55 799999999999998766655443
No 111
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=95.89 E-value=0.012 Score=48.36 Aligned_cols=56 Identities=11% Similarity=-0.029 Sum_probs=41.5
Q ss_pred eeeeecCcee-ee-ee-ccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEE
Q 032303 70 SMWKTGKCKL-PW-DW-QVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFF 127 (143)
Q Consensus 70 giWec~pg~f-~~-~y-~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V 127 (143)
-+-.=.||.. ++ +. ...|..|||||+..++.++.. ++++|||.++++++-.=--.-
T Consensus 189 ~~~t~~PG~~~p~~e~H~~eh~~~vL~G~g~y~l~~~~--~~V~~GD~i~~~~~~~h~~~n 247 (266)
T 4e2q_A 189 HTMDFQPGEFLNVKEVHYNQHGLLLLEGQGIYRLGDNW--YPVQAGDVIWMAPFVPQWYAA 247 (266)
T ss_dssp EEEEECTTCBCSSCCCCSCCEEEEEEECEEEEEETTEE--EEEETTCEEEECTTCCEEEEE
T ss_pred EEEEECCCcCcCCceEcccceEEEEEeceEEEEECCEE--EEecCCCEEEECCCCcEEEEe
Confidence 3555667765 33 33 356999999999999987654 699999999999995544333
No 112
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=95.64 E-value=0.024 Score=49.05 Aligned_cols=70 Identities=16% Similarity=0.199 Sum_probs=45.1
Q ss_pred HHhhcCCCceeeeeecCcee-eeee--ccceEEEEEEeEEEEEeC--CC-------------------------ee-eEE
Q 032303 60 RLKELDVSRWSMWKTGKCKL-PWDW--QVDQLVYIEEGEVRVVPE--GS-------------------------QR-YMR 108 (143)
Q Consensus 60 rl~~lGv~~wgiWec~pg~f-~~~y--~~dE~~yILEG~V~vt~d--~G-------------------------~~-~~e 108 (143)
-|..+|+. ...=.=.||.. +-+| ..+|+.||++|++++..- ++ .. ..+
T Consensus 257 ~L~~~gis-~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (418)
T 3s7i_A 257 QLQDLDMM-LTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRKEQQQRGRREEEEDEDEEEEGSNREVRRYTAR 335 (418)
T ss_dssp HHHHHTCE-EEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEEC-------------------CCEEEEEEEEE
T ss_pred hhccCCee-EEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCCccccccccccccccccccccccccceEEEee
Confidence 34455652 22223355554 3345 489999999999876543 23 11 367
Q ss_pred EcCCcEEEEcCCCEEEEEEecc
Q 032303 109 FLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 109 ~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
+++||+++||+|+.-.+.-.++
T Consensus 336 l~~GDV~vvP~G~~~~~~~~~~ 357 (418)
T 3s7i_A 336 LKEGDVFIMPAAHPVAINASSE 357 (418)
T ss_dssp ECTTCEEEECTTCCEEEEESSC
T ss_pred eCCCCEEEECCCCEEEEECCCC
Confidence 8999999999999865544443
No 113
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=95.60 E-value=0.095 Score=46.17 Aligned_cols=45 Identities=16% Similarity=0.189 Sum_probs=32.2
Q ss_pred cCCCHHHHhhcCCCceeeeeecCcee--eeeeccceEEEEEEeEEEEE
Q 032303 54 RQVSPERLKELDVSRWSMWKTGKCKL--PWDWQVDQLVYIEEGEVRVV 99 (143)
Q Consensus 54 ~~ps~~rl~~lGv~~wgiWec~pg~f--~~~y~~dE~~yILEG~V~vt 99 (143)
=++...-|.-+|+ +...-.-.|+.+ |.+.+..|++||++|++.+.
T Consensus 31 w~~~~~~L~~~gv-s~~r~~i~p~Gl~lPh~~~a~e~~~V~~G~g~~G 77 (466)
T 3kgl_A 31 WDHHAPQLRCSGV-SFVRYIIESKGLYLPSFFSTAKLSFVAKGEGLMG 77 (466)
T ss_dssp CCTTSHHHHHHTE-EEEEEEECTTEEEEEEEESSCEEEEEEECEEEEE
T ss_pred ECCCChhhccCCe-EEEEEEECCCCEeCCeeCCCCeEEEEEeCeEEEE
Confidence 4455567777786 445566678776 33345899999999999776
No 114
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=95.50 E-value=0.16 Score=45.08 Aligned_cols=83 Identities=18% Similarity=0.088 Sum_probs=56.7
Q ss_pred cCCCHHHHhhcCCCceeeeeecCcee-eeee-ccceEEEEEEeEEEEEeCC--C--------------e-----------
Q 032303 54 RQVSPERLKELDVSRWSMWKTGKCKL-PWDW-QVDQLVYIEEGEVRVVPEG--S--------------Q----------- 104 (143)
Q Consensus 54 ~~ps~~rl~~lGv~~wgiWec~pg~f-~~~y-~~dE~~yILEG~V~vt~d~--G--------------~----------- 104 (143)
-++....|.-+|++ .-.-.-.|+.+ .-+| +..|++||++|+..+...+ + +
T Consensus 36 ~~~~~~~l~~~gvs-~~r~~i~p~gl~lPh~~~a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~~~~~~~ 114 (510)
T 3c3v_A 36 WNPNNQEFECAGVA-LSRLVLRRNALRRPFYSNAPQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQRPPRRLQEE 114 (510)
T ss_dssp CCTTSHHHHHHTCE-EEEEEECTTEEEEEEECSSCEEEEEEECCEEEEEECTTCCCCEEEECCC----------------
T ss_pred eCCCCcccccCcEE-EEEEEECCCCCccceecCCCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccccccccc
Confidence 34555567677873 44456678876 3355 4799999999998887653 1 0
Q ss_pred -----------eeEEEcCCcEEEEcCCCEEEEEEec--ceEEEEEE
Q 032303 105 -----------RYMRFLAGDLIRYPKWFEADLFFNG--PYQERYSF 137 (143)
Q Consensus 105 -----------~~~e~~AGDlv~fPkG~~gtW~V~e--~vrK~Y~~ 137 (143)
....|++||+++||+|..--|.-.+ +++=+.++
T Consensus 115 ~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~ 160 (510)
T 3c3v_A 115 DQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLT 160 (510)
T ss_dssp ----CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEE
T ss_pred ccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEe
Confidence 1258999999999999987776654 34444444
No 115
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=95.45 E-value=0.054 Score=42.06 Aligned_cols=56 Identities=13% Similarity=0.016 Sum_probs=41.5
Q ss_pred eeecCcee-eeeeccc--------eEEEEEEeEEEEEeCCCe-------------------eeEEEcCCcEEEEcCCCEE
Q 032303 72 WKTGKCKL-PWDWQVD--------QLVYIEEGEVRVVPEGSQ-------------------RYMRFLAGDLIRYPKWFEA 123 (143)
Q Consensus 72 Wec~pg~f-~~~y~~d--------E~~yILEG~V~vt~d~G~-------------------~~~e~~AGDlv~fPkG~~g 123 (143)
....||.. +.+++.. |.++++.|++.|..++.. ..+.++|||.+.+|+|..=
T Consensus 58 l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIppg~~H 137 (175)
T 2y0o_A 58 LVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIPPNTKH 137 (175)
T ss_dssp EEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEECTTCCE
T ss_pred EEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEEECCCCcE
Confidence 33345543 5666655 999999999999996543 1258999999999999776
Q ss_pred EEEE
Q 032303 124 DLFF 127 (143)
Q Consensus 124 tW~V 127 (143)
.+..
T Consensus 138 ~f~a 141 (175)
T 2y0o_A 138 WFQA 141 (175)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6654
No 116
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=95.22 E-value=0.061 Score=44.97 Aligned_cols=64 Identities=13% Similarity=-0.049 Sum_probs=47.6
Q ss_pred eeeecCceeeee-eccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecceEEEEE
Q 032303 71 MWKTGKCKLPWD-WQVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGPYQERYS 136 (143)
Q Consensus 71 iWec~pg~f~~~-y~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~vrK~Y~ 136 (143)
+=-+.+|+-.-. -..+=.+++|||+..|+-++.. +.+++||++.+|+|...+|.-.+.-+=.++
T Consensus 211 V~l~G~Ges~~~~~~~d~wiWqLEGss~Vt~~~q~--~~L~~~DsLLIpa~~~y~~~r~~gsv~L~I 275 (286)
T 2qnk_A 211 VIAYGQGSSEGLRQNVDVWLWQLEGSSVVTMGGRR--LSLAPDDSLLVLAGTSYAWERTQGSVALSV 275 (286)
T ss_dssp EEEECSEEEEECCCSSCEEEEEEESCEEEEETTEE--EEECTTEEEEECTTCCEEEEECTTCEEEEE
T ss_pred EEEEcCCccccccCcCcEEEEEEcCceEEEECCeE--EeccCCCEEEecCCCeEEEEecCCeEEEEE
Confidence 333556654322 2247789999999999986655 699999999999999999998766554443
No 117
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=94.66 E-value=0.048 Score=43.86 Aligned_cols=55 Identities=9% Similarity=0.233 Sum_probs=41.3
Q ss_pred ecCcee-eeeec--cceEEEEEEeEEEEE---eCCCeeeEEEcC-C---cEEEEcCCCEEEEEEec
Q 032303 74 TGKCKL-PWDWQ--VDQLVYIEEGEVRVV---PEGSQRYMRFLA-G---DLIRYPKWFEADLFFNG 129 (143)
Q Consensus 74 c~pg~f-~~~y~--~dE~~yILEG~V~vt---~d~G~~~~e~~A-G---Dlv~fPkG~~gtW~V~e 129 (143)
..||.. .||++ ..|..++|+|++.|. +..|+. +++.. | |.+++|+|+.=--+..+
T Consensus 279 ~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ip~g~~h~~~n~~ 343 (369)
T 3st7_A 279 SKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEI-IEYYVSGDKLEVVDIPVGYTHNIENLG 343 (369)
T ss_dssp ECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTCCCC-EEEEEETTBCCEEEECTTEEEEEEECS
T ss_pred ecCCceeccccccCcceEEEEEeeeEEEEEEcCCCCcE-EEEEecCCcceEEEeCCCceEEeEEcC
Confidence 446654 34554 789999999999994 455666 78888 9 99999999876666654
No 118
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=94.35 E-value=0.096 Score=39.77 Aligned_cols=52 Identities=13% Similarity=0.013 Sum_probs=39.9
Q ss_pred cCc-eeeeeec-cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEec
Q 032303 75 GKC-KLPWDWQ-VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNG 129 (143)
Q Consensus 75 ~pg-~f~~~y~-~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e 129 (143)
.|| .++.+.+ ..|..|||+|+.... ++.. ..++|||.++.|+|..=+....+
T Consensus 51 ~pG~~~p~H~H~g~ee~~VL~G~f~~~--~~~~-~~~~aGd~~~~P~g~~H~~~a~~ 104 (165)
T 3cjx_A 51 APGLTLPLHFHTGTVHMYTISGCWYYT--EYPG-QKQTAGCYLYEPGGSIHQFNTPR 104 (165)
T ss_dssp CTTCBCCEEEESSCEEEEEEESEEEET--TCTT-SCEETTEEEEECTTCEECEECCT
T ss_pred CCCCcCCcccCCCCEEEEEEEEEEEEC--CCce-EEECCCeEEEeCCCCceeeEeCC
Confidence 344 4566766 689999999999873 2212 46899999999999998877766
No 119
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=93.81 E-value=0.14 Score=42.38 Aligned_cols=43 Identities=16% Similarity=0.174 Sum_probs=34.0
Q ss_pred cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecc
Q 032303 85 VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 85 ~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
.-.++.+++|+++|.. +|+. ..+++||.|++|++. +.+.+...
T Consensus 269 ~~~il~v~~G~~~l~~-~~~~-~~l~~G~~~~vpa~~-~~~~i~g~ 311 (319)
T 1qwr_A 269 SFLICSVIEGSGLLKY-EDKT-CPLKKGDHFILPAQM-PDFTIKGT 311 (319)
T ss_dssp SCEEEEEEEEEEEEEE-TTEE-EEEETTCEEEECTTC-CCEEEEEE
T ss_pred ccEEEEEEcCeEEEEE-CCEE-EEEcCCcEEEEeCCC-ceEEEEec
Confidence 3578899999999987 4666 789999999999987 34555543
No 120
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=93.55 E-value=0.45 Score=40.61 Aligned_cols=59 Identities=14% Similarity=0.125 Sum_probs=41.2
Q ss_pred ceeeeeecCceeeeeeccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEec
Q 032303 68 RWSMWKTGKCKLPWDWQVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNG 129 (143)
Q Consensus 68 ~wgiWec~pg~f~~~y~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e 129 (143)
.-..|.-.+++.....+.-.++.+++|+++|+.++ +. ..+++||.+++|++. +.+.+..
T Consensus 325 ~v~~~~l~~~~~~~~~~~~~il~v~~G~~~l~~~~-~~-~~l~~G~~~fvpa~~-~~~~i~g 383 (394)
T 2wfp_A 325 AFSLHDLALQETSIGQHSAAILFCVEGEAVLRKDE-QR-LVLKPGESAFIGADE-SPVNASG 383 (394)
T ss_dssp EEEEEECCSSCEEECCSSCEEEEEEEEEEEEEETT-EE-EEECTTCEEEECGGG-CCEEEEE
T ss_pred EEEEEEEcCCeEEecCCCcEEEEEEeceEEEEECC-eE-EEEccCcEEEEeCCC-ceEEEEe
Confidence 34455545554444334458999999999999865 54 689999999999985 2344443
No 121
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=93.43 E-value=0.082 Score=40.67 Aligned_cols=51 Identities=22% Similarity=0.161 Sum_probs=35.5
Q ss_pred eeeecCce-eeeee-ccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEE
Q 032303 71 MWKTGKCK-LPWDW-QVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFF 127 (143)
Q Consensus 71 iWec~pg~-f~~~y-~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V 127 (143)
...-.||. ++.+. ...|+.|||+|+.. +++| .+.+||.+++|.|..=....
T Consensus 129 l~~~~pG~~~p~H~H~g~E~~~VL~G~f~--de~~----~~~~Gd~~~~p~g~~H~p~a 181 (195)
T 2q1z_B 129 LLWIPGGQAVPDHGHRGLELTLVLQGAFR--DETD----RFGAGDIEIADQELEHTPVA 181 (195)
T ss_dssp EEEECTTCBCCCCCCSSCEEEEEEESEEE--CSSS----EEETTCEEEECSSCCCCCEE
T ss_pred EEEECCCCCCCCcCCCCeEEEEEEEEEEE--CCcE----EECCCeEEEeCcCCccCCEe
Confidence 33344554 45554 36899999999855 3333 58999999999998765554
No 122
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=92.76 E-value=0.32 Score=42.26 Aligned_cols=59 Identities=10% Similarity=-0.017 Sum_probs=40.2
Q ss_pred eeeeeec--Cc-eeee-eeccceEEEEEEeEEEEEeCCC-eeeEEEcCCcEEEEcCCCEEEEEEec
Q 032303 69 WSMWKTG--KC-KLPW-DWQVDQLVYIEEGEVRVVPEGS-QRYMRFLAGDLIRYPKWFEADLFFNG 129 (143)
Q Consensus 69 wgiWec~--pg-~f~~-~y~~dE~~yILEG~V~vt~d~G-~~~~e~~AGDlv~fPkG~~gtW~V~e 129 (143)
-..|... ++ +... ..+.-.++.+++|+++|...++ .+...+++||.|++|++ ..+++..
T Consensus 359 v~~~~~~~~~~~~~~~~~~~~~~illv~~G~g~i~~~~~~~~~~~l~~G~~~fvpa~--~~~~i~g 422 (440)
T 1pmi_A 359 VLQTIFDKSKGGKQVIEGLNGPSIVIATNGKGTIQITGDDSTKQKIDTGYVFFVAPG--SSIELTA 422 (440)
T ss_dssp EEEEECCTTTCCEEEECCCSSCEEEEEEESEEEEEETTCGGGCEEEETTCEEEECTT--CCEEEEE
T ss_pred EEEEEecCCCCceeEEecCCCcEEEEEEeCeEEEEeCCcccceEEeccCCEEEEeCC--CcEEEEE
Confidence 3345544 34 3433 2345679999999999998765 31037999999999999 3555554
No 123
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=92.31 E-value=0.49 Score=38.89 Aligned_cols=42 Identities=14% Similarity=0.201 Sum_probs=32.0
Q ss_pred ccc-eEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEec
Q 032303 84 QVD-QLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNG 129 (143)
Q Consensus 84 ~~d-E~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e 129 (143)
+.- .++.+++| ++|+. +|+. ..+++||.|++|++.. .+.+..
T Consensus 246 ~~~~~il~v~~G-~~i~~-~~~~-~~l~~G~~~~ipa~~~-~~~i~g 288 (300)
T 1zx5_A 246 GGVMNILYAAEG-YFILR-GKET-ADLHRGYSCLVPASTD-SFTVES 288 (300)
T ss_dssp CSBCEEEEEEES-CEEEE-SSSE-EEECTTCEEEECTTCC-EEEEEE
T ss_pred CCceEEEEEccc-EEEEe-CCeE-EEEccceEEEEeCCCc-eEEEEe
Confidence 344 78899999 99998 4554 6899999999999863 344443
No 124
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=91.64 E-value=0.25 Score=36.26 Aligned_cols=59 Identities=14% Similarity=0.227 Sum_probs=41.9
Q ss_pred CCCHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEeCCCeeeEEEcCCcEE
Q 032303 55 QVSPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLI 115 (143)
Q Consensus 55 ~ps~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv 115 (143)
+.+++.+.++-. ....-...||..=+.-. .+.+++|++|.|.+..++|.. ..+++||.|
T Consensus 82 ~l~~~~l~~l~~-~~~~~~~~~ge~I~~~g~~~~~ly~I~~G~v~v~~~~g~~-~~l~~G~~f 142 (202)
T 3bpz_A 82 NADPNFVTAMLT-KLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKE-MKLSDGSYF 142 (202)
T ss_dssp TSCHHHHHHHHH-HCEEEEECTTCEEECTTSBCCEEEEEEECEEEEECTTSCC-EEEETTCEE
T ss_pred cCCHHHHHHHHH-hCCceEECCCCEEEECCCcCCeEEEEeccEEEEEECCCeE-EEEcCCCEe
Confidence 456665555432 22345667887654432 578999999999999888887 789999977
No 125
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=91.47 E-value=0.27 Score=38.89 Aligned_cols=54 Identities=11% Similarity=0.007 Sum_probs=38.6
Q ss_pred eeeecCce-eeeeec-cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecc
Q 032303 71 MWKTGKCK-LPWDWQ-VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 71 iWec~pg~-f~~~y~-~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
...-.||. ++.+.+ ..|.+|||+|+.. +++ ..+.|||.++.|+|..=.....+.
T Consensus 47 lvr~~pG~~~p~H~H~g~Ee~~VL~G~f~--d~~----~~~~~Gd~~~~P~g~~H~p~a~~g 102 (223)
T 3o14_A 47 IVRYAPGSRFSAHTHDGGEEFIVLDGVFQ--DEH----GDYPAGTYVRNPPTTSHVPGSAEG 102 (223)
T ss_dssp EEEECTTEECCCEECTTCEEEEEEEEEEE--ETT----EEEETTEEEEECTTCEECCEESSC
T ss_pred EEEECCCCCcccccCCCCEEEEEEEeEEE--ECC----eEECCCeEEEeCCCCccccEeCCC
Confidence 34445554 566665 7899999999975 332 368999999999998766555443
No 126
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=91.46 E-value=0.44 Score=35.70 Aligned_cols=53 Identities=17% Similarity=0.084 Sum_probs=39.1
Q ss_pred eeecCce-eeeeec-cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEe
Q 032303 72 WKTGKCK-LPWDWQ-VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFN 128 (143)
Q Consensus 72 Wec~pg~-f~~~y~-~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~ 128 (143)
..-.||. ++.+.+ ..|..|||+|+..+. +++ ..+.|||.++.|+|..=+....
T Consensus 47 vr~~pG~~~p~H~H~g~ee~~VL~G~~~~~-e~~---~~~~~Gd~~~~P~g~~H~~~~~ 101 (159)
T 3ebr_A 47 LKAPAGMEMPRHHHTGTVIVYTVQGSWRYK-EHD---WVAHAGSVVYETASTRHTPQSA 101 (159)
T ss_dssp EEECSSCBCCCEEESSCEEEEEEESCEEET-TSS---CCBCTTCEEEECSSEEECEEES
T ss_pred EEECCCCCcccccCCCCEEEEEEEeEEEEe-CCC---eEECCCeEEEECCCCcceeEeC
Confidence 3334443 565655 689999999998874 333 2589999999999987777776
No 127
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=91.11 E-value=0.58 Score=31.69 Aligned_cols=60 Identities=12% Similarity=0.070 Sum_probs=42.9
Q ss_pred cCCCHHHHhhcCCCceeeeeec-Cceeeeeec--cceEEEEEEeEEEEEeCCCeeeEEEcCCcEE
Q 032303 54 RQVSPERLKELDVSRWSMWKTG-KCKLPWDWQ--VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLI 115 (143)
Q Consensus 54 ~~ps~~rl~~lGv~~wgiWec~-pg~f~~~y~--~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv 115 (143)
.+.+++.+..+-. ..-.-... +|..-+.-. .+.+++|++|.|++...+|.. ..+++||.+
T Consensus 25 ~~l~~~~~~~l~~-~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~-~~l~~G~~f 87 (134)
T 2d93_A 25 ANMTMSVRRELCS-VMIFEVVEQAGAIILEDGQELDSWYVILNGTVEISHPDGKV-ENLFMGNSF 87 (134)
T ss_dssp TSSCHHHHHHHTT-TEEEEEECSSSCEEECTTCEECEEEECCBSCEEEECSSSCE-EEECTTCEE
T ss_pred hhCCHHHHHHHHH-hheEEEecCCCCEEEeCCCCCCeEEEEEeCEEEEEcCCCcE-EEecCCCcc
Confidence 3456677766643 23445566 777654432 477899999999999888887 789999976
No 128
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=88.63 E-value=1.2 Score=35.91 Aligned_cols=49 Identities=16% Similarity=0.083 Sum_probs=39.2
Q ss_pred ceeeeeec--cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEE
Q 032303 77 CKLPWDWQ--VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFF 127 (143)
Q Consensus 77 g~f~~~y~--~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V 127 (143)
..|+.+-+ .+.+-|||+|+++-.+.-|+. ..++|||+-.+.+|. |.++.
T Consensus 75 ~gf~~HPHrg~EtvTyvl~G~~~H~DS~Gn~-~~i~~GdvQ~MtAG~-GI~Hs 125 (256)
T 2vec_A 75 AAFQPRTYPKVDILNVILDGEAEYRDSEGNH-VQASAGEALLLSTQP-GVSYS 125 (256)
T ss_dssp CEEEEECCSSEEEEEEEEESEEEEEETTSCE-EEEETTEEEEECCCT-TCCEE
T ss_pred CccCCcCCCCcEEEEEEEeeEEEEEeCCCCE-EEECCCeEEEEECCC-CeEEE
Confidence 35887754 345789999999999998888 799999999999994 44444
No 129
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=88.45 E-value=1.3 Score=35.76 Aligned_cols=43 Identities=12% Similarity=0.135 Sum_probs=32.3
Q ss_pred eEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecc
Q 032303 87 QLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 87 E~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
=++|+++|+++|..+++.. ..+.+||+++|..+-.-+-+-.++
T Consensus 204 ~~l~v~~G~v~v~g~~~~~-~~l~~gd~~~l~~~~~l~l~a~~~ 246 (256)
T 2vec_A 204 AYLQSIHGKFHALTHHEEK-AALTCGDGAFIRDEANITLVADSP 246 (256)
T ss_dssp EEEEEEESCEEEEETTEEE-EEECTTCEEEEESCSEEEEEESSS
T ss_pred EEEEEEECEEEECCccccc-eEECCCCEEEECCCCeEEEEeCCC
Confidence 5788999999997655544 579999999998876555544444
No 130
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=88.28 E-value=0.71 Score=33.55 Aligned_cols=60 Identities=8% Similarity=0.067 Sum_probs=41.5
Q ss_pred CCCHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEeCCCeeeEEEcCCcEE
Q 032303 55 QVSPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLI 115 (143)
Q Consensus 55 ~ps~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv 115 (143)
+.+++.+.++-. ..-.-...||..=+.-. .+.+++|++|.|.+...+|.....+++||.|
T Consensus 81 ~l~~~~l~~l~~-~~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~~~~~~g~~~~~l~~G~~f 142 (198)
T 2ptm_A 81 GADSNFVTRVVT-LLEFEVFQPADYVIQEGTFGDRMFFIQQGIVDIIMSDGVIATSLSDGSYF 142 (198)
T ss_dssp TCCHHHHHHHHH-HCEEEEECTTCEEECTTSCCSEEEEEEECCEEEECTTSCEEEEECTTCEE
T ss_pred cCCHHHHHHHHH-hccceeeCCCCEEEECCCcCcEEEEEEeCEEEEEecCCeEEEEecCCCEe
Confidence 456666555431 23345567777654432 5789999999999998777655789999976
No 131
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=87.87 E-value=0.65 Score=35.14 Aligned_cols=54 Identities=6% Similarity=-0.101 Sum_probs=39.5
Q ss_pred eeeecCce-eeeeec-cceEEEEEEeEEEEEeCCC-eeeEEEcCCcEEEEcCCCEEEE
Q 032303 71 MWKTGKCK-LPWDWQ-VDQLVYIEEGEVRVVPEGS-QRYMRFLAGDLIRYPKWFEADL 125 (143)
Q Consensus 71 iWec~pg~-f~~~y~-~dE~~yILEG~V~vt~d~G-~~~~e~~AGDlv~fPkG~~gtW 125 (143)
+=...||. |+.|++ ..|.+++|||.-.....+- .. ..+.||+.++-|+|..=+.
T Consensus 50 lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~~~Gd~~~~-~~~~aGsYv~ePpGs~H~p 106 (153)
T 3bal_A 50 IFNCPAGSSFASHIHAGPGEYFLTKGKMEVRGGEQEGG-STAYAPSYGFESSGALHGK 106 (153)
T ss_dssp EEEECTTEEECCEEESSCEEEEEEESEEEETTCGGGTS-EEEESSEEEEECTTCEESC
T ss_pred EEEeCCCCCccCccCCCCEEEEEEEEEEEecCccccCc-cccCCCeEEEcCCCCcccc
Confidence 33445654 677776 6899999999987643221 12 4689999999999999873
No 132
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=87.38 E-value=8.3 Score=34.54 Aligned_cols=44 Identities=18% Similarity=0.159 Sum_probs=29.4
Q ss_pred CCCHHHHhhcCCCceeeeeecCcee-eeee-ccceEEEEEEeEEEEE
Q 032303 55 QVSPERLKELDVSRWSMWKTGKCKL-PWDW-QVDQLVYIEEGEVRVV 99 (143)
Q Consensus 55 ~ps~~rl~~lGv~~wgiWec~pg~f-~~~y-~~dE~~yILEG~V~vt 99 (143)
++...-|.-+||. ...=.-.|+.+ +-+| +..|++||++|++.+.
T Consensus 37 ~~~~p~l~~~Gvs-~~R~~i~p~Gl~lPh~~~a~el~yV~qG~g~~G 82 (531)
T 3fz3_A 37 NFNQGDFQCAGVA-ASRITIQRNGLHLPSYSNAPQLIYIVQGRGVLG 82 (531)
T ss_dssp CTTSHHHHHHTEE-EEEEEECTTEEEEEEEESSCEEEEEEECEEEEE
T ss_pred CCCChhhccCcce-EEEEEecCCCEeCCccCCCCeEEEEEECcEEEE
Confidence 4555677778873 33334456655 3344 5899999999998776
No 133
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=87.01 E-value=0.97 Score=30.65 Aligned_cols=60 Identities=17% Similarity=0.154 Sum_probs=39.8
Q ss_pred CCCHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEE
Q 032303 55 QVSPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIR 116 (143)
Q Consensus 55 ~ps~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~ 116 (143)
+.+++.+.++-. ....-...+|..=+.-. .+.+++|++|.|++..++ .....+++||.+=
T Consensus 33 ~l~~~~~~~l~~-~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~g-~~~~~~~~G~~fG 94 (139)
T 3ocp_A 33 NLELSQIQEIVD-CMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTKEG-VKLCTMGPGKVFG 94 (139)
T ss_dssp TSCHHHHHHHHH-HCEEEEECSSCEEECTTSCCCEEEEEEECCEEEEETT-EEEEEECTTCEES
T ss_pred cCCHHHHHHHHH-hcEEEecCCCCEEEeCCCcCCEEEEEEeCEEEEEECC-EEEEEeCCCCEec
Confidence 345555555432 22345667777654432 578999999999998755 4447899999863
No 134
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=85.04 E-value=0.48 Score=35.36 Aligned_cols=51 Identities=10% Similarity=0.163 Sum_probs=35.3
Q ss_pred eeeeecCcee-eeeecc-ceEEEEEEeEEEEEe--CC------------------------------------CeeeEEE
Q 032303 70 SMWKTGKCKL-PWDWQV-DQLVYIEEGEVRVVP--EG------------------------------------SQRYMRF 109 (143)
Q Consensus 70 giWec~pg~f-~~~y~~-dE~~yILEG~V~vt~--d~------------------------------------G~~~~e~ 109 (143)
-+|=..+|+. +.|++. +=+...+.|+=+++- .+ .-. .++
T Consensus 127 ~~wiG~~gs~t~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~-~~l 205 (235)
T 4gjz_A 127 NAWFGPQGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLS-CIL 205 (235)
T ss_dssp EEEEECTTCEEEEECCSSEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEE-EEE
T ss_pred EEEEeCCCCCceeeeccccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEE-EEE
Confidence 4677777765 457774 556667788876652 10 113 689
Q ss_pred cCCcEEEEcCCC
Q 032303 110 LAGDLIRYPKWF 121 (143)
Q Consensus 110 ~AGDlv~fPkG~ 121 (143)
+|||++++|+||
T Consensus 206 ~pGD~LyiP~gW 217 (235)
T 4gjz_A 206 SPGEILFIPVKY 217 (235)
T ss_dssp CTTCEEEECTTC
T ss_pred CCCCEEEeCCCC
Confidence 999999999998
No 135
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=84.88 E-value=1.6 Score=29.84 Aligned_cols=62 Identities=19% Similarity=0.284 Sum_probs=42.7
Q ss_pred cCCCHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEE
Q 032303 54 RQVSPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRY 117 (143)
Q Consensus 54 ~~ps~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~f 117 (143)
.+.+++.+.++-. ....-...+|..=+.-. .+.+++|++|.|++..++... ..+++||.+--
T Consensus 36 ~~l~~~~~~~l~~-~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~~-~~~~~G~~fG~ 99 (160)
T 4f8a_A 36 RLASDGCLRALAM-EFQTVHCAPGDLIYHAGESVDSLCFVVSGSLEVIQDDEVV-AILGKGDVFGD 99 (160)
T ss_dssp TTCCHHHHHHHHT-TCEEEEECTTCEEECTTSBCCEEEEEEESEEEEEETTEEE-EEEETTCEEEC
T ss_pred hhCCHHHHHHHHH-hceeeeeCCCCEEEeCCCCccEEEEEEeeEEEEEECCEEE-EEecCCCEeCc
Confidence 4556666666532 23345556777654433 588999999999999865544 78999998864
No 136
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=84.72 E-value=1.4 Score=30.57 Aligned_cols=60 Identities=10% Similarity=-0.003 Sum_probs=40.7
Q ss_pred cCCCHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEeCCCeeeEEEcCCcEE
Q 032303 54 RQVSPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLI 115 (143)
Q Consensus 54 ~~ps~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv 115 (143)
.+.+++.+..+- .....-...+|..=+.-. .+.+++|++|.|++..++. ....+++||.+
T Consensus 47 ~~l~~~~~~~l~-~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~-~~~~~~~G~~f 108 (154)
T 3pna_A 47 SHLDDNERSDIF-DAMFPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYVNNE-WATSVGEGGSF 108 (154)
T ss_dssp TTCCHHHHHHHH-HHCEEEEECTTCEEECTTSCCCEEEEEEESCEEEEETTE-EEEEECTTCEE
T ss_pred hhCCHHHHHHHH-HhceEEEECCCCEEEeCCCCCCeEEEEEecEEEEEECCE-EEEEecCCCEe
Confidence 344555555442 123456677887655433 5789999999999998554 44789999986
No 137
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=83.95 E-value=7.4 Score=29.42 Aligned_cols=56 Identities=13% Similarity=0.072 Sum_probs=37.3
Q ss_pred cceEEEEEEeEEEEEe---CCC-----eeeEEEcCCcEEEEcCCCEEEEEEecceEEEEEEEeccC
Q 032303 85 VDQLVYIEEGEVRVVP---EGS-----QRYMRFLAGDLIRYPKWFEADLFFNGPYQERYSFRAYGD 142 (143)
Q Consensus 85 ~dE~~yILEG~V~vt~---d~G-----~~~~e~~AGDlv~fPkG~~gtW~V~e~vrK~Y~~~a~~~ 142 (143)
...++.||+|+.+.+. ++| .. ..+.|||.+++|+|.-=.=+-... +..-.+.+||.
T Consensus 90 s~~~~~VL~G~l~e~~y~~~~~~~~~~~~-~~l~~G~~~~~~~~~iH~V~N~~~-~~aVSlHvY~p 153 (171)
T 3eqe_A 90 SIGCAMVLEGKLLNSIYRSTGEHAELSNS-YFVHEGECLISTKGLIHKMSNPTS-ERMVSLHVYSP 153 (171)
T ss_dssp CEEEEEEEESEEEEEEEEECSSSEEEEEE-EEEETTCEEEECTTCEEEEECCSS-SCEEEEEEEES
T ss_pred ceEEEEEEeeeEEEEEeecCCCceeecce-EEeCCCcEEEeCCCCEEEEECCCC-CCEEEEEEeCC
Confidence 3578889999999864 344 23 689999999999876544333333 34445566653
No 138
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=83.59 E-value=3.4 Score=32.89 Aligned_cols=51 Identities=14% Similarity=0.039 Sum_probs=41.9
Q ss_pred ceeeeeec--cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEec
Q 032303 77 CKLPWDWQ--VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNG 129 (143)
Q Consensus 77 g~f~~~y~--~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e 129 (143)
..|+.+=+ .+.+-|+|+|++.=.+.-|+. ..|+|||+=.+-+| +|.++..-
T Consensus 52 ~gf~~HPHrg~EtvTyvl~G~~~H~DS~Gn~-~~i~~GdvQ~MtAG-~GI~HsE~ 104 (242)
T 1tq5_A 52 QGFGTHPHKDMEILTYVLEGTVEHQDSMGNK-EQVPAGEFQIMSAG-TGIRHSEY 104 (242)
T ss_dssp CEEEEEEECSCEEEEEEEESEEEEEESSSCE-EEEETTCEEEEECT-TCEEEEEE
T ss_pred CcCCCcCCCCcEEEEEEEEeEEEEEeCCCCc-EEECCCcEEEEECC-CCcEEEEE
Confidence 35877643 566899999999999988888 79999999999999 57776643
No 139
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=82.25 E-value=5.9 Score=30.70 Aligned_cols=44 Identities=18% Similarity=0.197 Sum_probs=31.9
Q ss_pred cCcee-eee-eccceEEEEEEeEEEEEe----CCC------eeeEEEcCCcEEEEcC
Q 032303 75 GKCKL-PWD-WQVDQLVYIEEGEVRVVP----EGS------QRYMRFLAGDLIRYPK 119 (143)
Q Consensus 75 ~pg~f-~~~-y~~dE~~yILEG~V~vt~----d~G------~~~~e~~AGDlv~fPk 119 (143)
.||+. +.| -....+++||+|+.+.+. ++| .. ..+.+||.+.|+.
T Consensus 87 ~PGq~spiHdH~~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~-~~l~~G~v~~~~~ 142 (208)
T 2gm6_A 87 GPGQRTPIHDHTVWGLIGMLRGAEYSQPFVLDGSGRPVLHGEP-TRLEPGHVEAVSP 142 (208)
T ss_dssp CTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCC-EEECTTCEEEEBT
T ss_pred CCCcccCcccCCcceEEEEecccEEEEEeecCCCCccccccce-EEeCCCCEEEECC
Confidence 45554 233 235899999999998764 444 33 6899999999999
No 140
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=82.18 E-value=1.7 Score=31.92 Aligned_cols=59 Identities=12% Similarity=-0.020 Sum_probs=39.4
Q ss_pred CCHHHHhhcCCCceeeeeecCceeeeee--ccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEE
Q 032303 56 VSPERLKELDVSRWSMWKTGKCKLPWDW--QVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIR 116 (143)
Q Consensus 56 ps~~rl~~lGv~~wgiWec~pg~f~~~y--~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~ 116 (143)
.+++.+.++-. ....-...+|..=+.- ..+.+++|++|.|.+..++... ..+++||.+=
T Consensus 18 l~~~~~~~l~~-~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~v~~~~~~~-~~~~~g~~fG 78 (246)
T 3of1_A 18 LDSDSKRLVIN-CLEEKSVPKGATIIKQGDQGDYFYVVEKGTVDFYVNDNKV-NSSGPGSSFG 78 (246)
T ss_dssp SCHHHHHHHHT-TCEEEEECTTCEEECTTCCCCEEEEEEECCEEEESTTSCC-EEECTTCEEC
T ss_pred CCHHHHHHHHH-hhceEEECCCCEEEecCCCCCEEEEEEeeEEEEEECCEEE-EecCCCCeee
Confidence 45555555532 2234455666654433 2578999999999999876555 7899999873
No 141
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=81.75 E-value=2.1 Score=31.33 Aligned_cols=65 Identities=14% Similarity=0.129 Sum_probs=43.6
Q ss_pred EEecCCCHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEE
Q 032303 51 RVERQVSPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRY 117 (143)
Q Consensus 51 ~ve~~ps~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~f 117 (143)
.+=++.+++.+.++-. ..-.=...||..=+.-. .+.+++|++|.|.+..++... ..+++||.+=-
T Consensus 81 ~~f~~l~~~~l~~l~~-~~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~-~~l~~G~~fGe 147 (212)
T 3ukn_A 81 PLFESASRGCLRSLSL-IIKTSFCAPGEFLIRQGDALQAIYFVCSGSMEVLKDNTVL-AILGKGDLIGS 147 (212)
T ss_dssp GGGTTCCHHHHHHHHH-HCEEEEECTTCEEECTTSBCCEEEEEEECCEEEESSSCEE-EEECTTCEEEC
T ss_pred HHhhcCCHHHHHHHHH-HhheEEeCCCCEEEECCCcccEEEEEEecEEEEEECCeEE-EEecCCCCcCc
Confidence 3334566666666532 22334567777654432 588999999999999865444 78999998853
No 142
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=81.70 E-value=3.4 Score=35.75 Aligned_cols=52 Identities=19% Similarity=0.275 Sum_probs=37.6
Q ss_pred eeeeecCce--eeeeecc-ceEEEEEEeEEEEE--eCC------------------CeeeEEEcCCcEEEEcCCCE
Q 032303 70 SMWKTGKCK--LPWDWQV-DQLVYIEEGEVRVV--PEG------------------SQRYMRFLAGDLIRYPKWFE 122 (143)
Q Consensus 70 giWec~pg~--f~~~y~~-dE~~yILEG~V~vt--~d~------------------G~~~~e~~AGDlv~fPkG~~ 122 (143)
-.|-..+|. |+.|||. +=+..-++|+=+.+ +.+ ... ..+.|||++++|+||-
T Consensus 142 n~y~~~~g~~g~~~H~D~~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~-~~L~pGD~LYiP~g~~ 216 (442)
T 2xdv_A 142 NVYITPAGSQGLPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHE-FMLKPGDLLYFPRGTI 216 (442)
T ss_dssp EEEEECTTCBCSCSEECSSEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEE-EEECTTCEEEECTTCE
T ss_pred ceEECCCCCCCccceECCcceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceE-EEECCCcEEEECCCce
Confidence 457777774 5688984 66667788986666 221 223 6899999999999983
No 143
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=81.48 E-value=11 Score=30.90 Aligned_cols=75 Identities=12% Similarity=0.114 Sum_probs=50.8
Q ss_pred cCCCceeeeeecCce-eeeeeccceEEEE-EEeEEEEEeCCCeeeEEEcC---------CcEEEEcCCCEEEEEEecceE
Q 032303 64 LDVSRWSMWKTGKCK-LPWDWQVDQLVYI-EEGEVRVVPEGSQRYMRFLA---------GDLIRYPKWFEADLFFNGPYQ 132 (143)
Q Consensus 64 lGv~~wgiWec~pg~-f~~~y~~dE~~yI-LEG~V~vt~d~G~~~~e~~A---------GDlv~fPkG~~gtW~V~e~vr 132 (143)
+..-...+..=.+|. +.......|+|.| |.|+++|+.++ +.+..++. .|.+.+|+|...+-+-..+ -
T Consensus 26 ~~y~~f~~~~L~~Ge~~~~~~~~~E~~iv~l~G~~~V~~~g-~~~~~~g~R~svF~~~~p~~lYvp~g~~v~i~a~~~-~ 103 (270)
T 2qjv_A 26 WEYVGFDVWQLXAGESITLPSDERERCLVLVAGLASVXAAD-SFFYRIGQRMSPFERIPAYSVYLPHHTEAXVTAETD-L 103 (270)
T ss_dssp SSSCEEEEEEECTTCEEEECCSSEEEEEEEEESCEEEEETT-EEEEEECCCSSGGGCSCCCEEEECSSCCEEEEESSS-E
T ss_pred cEEeEEEEEEecCCCEEEecCCCcEEEEEEecceEEEEECC-EEEeccccccccccCCCCcEEEECCCCEEEEEecCC-c
Confidence 333345678877776 3444456798875 68999999865 44223343 4999999999777776666 6
Q ss_pred EEEEEEec
Q 032303 133 ERYSFRAY 140 (143)
Q Consensus 133 K~Y~~~a~ 140 (143)
|+|...|-
T Consensus 104 ~~~v~sAp 111 (270)
T 2qjv_A 104 ELAVCSAP 111 (270)
T ss_dssp EEEEEEEE
T ss_pred eEEEEeee
Confidence 67776554
No 144
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=81.26 E-value=3.6 Score=31.63 Aligned_cols=38 Identities=18% Similarity=0.341 Sum_probs=28.2
Q ss_pred ccceEEEEEEeEE-EE--EeCCCeeeEE------EcCCcE--EEEcCCCE
Q 032303 84 QVDQLVYIEEGEV-RV--VPEGSQRYMR------FLAGDL--IRYPKWFE 122 (143)
Q Consensus 84 ~~dE~~yILEG~V-~v--t~d~G~~~~e------~~AGDl--v~fPkG~~ 122 (143)
+.||+-|+.+|.. +| ..+||.. .. +.+|+. +++|+|.-
T Consensus 68 ~sdEiW~~~~G~pL~l~l~~~dg~~-~~~~LG~dv~~Ge~pQ~vVP~G~w 116 (170)
T 1yud_A 68 TADEMWYFHAGQSLTIYMISPEGEL-TTAQLGLDLAAGERPQFLVPKGCI 116 (170)
T ss_dssp SSCEEEEEEEESCEEEEEECTTSCE-EEEEESSCTTTTEESCEEECTTCE
T ss_pred CCCEEEEEEcCCCEEEEEEcCCCCE-EEEEeCCCcccCceeEEEECCCCE
Confidence 5899999999975 43 3456654 34 567898 99999953
No 145
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=79.73 E-value=4.2 Score=34.05 Aligned_cols=54 Identities=4% Similarity=0.042 Sum_probs=40.3
Q ss_pred eeeeecCceeeeeeccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCC-EEEEEE--ecceEE
Q 032303 70 SMWKTGKCKLPWDWQVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWF-EADLFF--NGPYQE 133 (143)
Q Consensus 70 giWec~pg~f~~~y~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~-~gtW~V--~e~vrK 133 (143)
+-|...+|-|. ..-| .|||+|++.+ |+ ..+.+|+-+++|+|- .+.|.| .+++.=
T Consensus 100 p~~~~P~Gi~~---ad~E-~fVL~G~i~~----G~--~~l~~h~Y~f~PaGV~~~~~kv~~~~g~~i 156 (303)
T 2qdr_A 100 PKFEAPSGIFT---ADLE-IFVIKGAIQL----GE--WQLNKHSYSFIPAGVRIGSWKVLGGEEAEI 156 (303)
T ss_dssp TTCEECCBEES---SCEE-EEEEESEEEE----TT--EEECTTEEEEECTTCCBCCEEEETTSCEEE
T ss_pred CCCCCCCcccc---cceE-EEEEEeEEEe----CC--EEecCCceEEecCCCccCceeecCCCCcEE
Confidence 45777776654 2346 8999999987 33 368999999999998 688998 555543
No 146
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=78.77 E-value=5.4 Score=34.84 Aligned_cols=56 Identities=13% Similarity=0.097 Sum_probs=38.6
Q ss_pred eeeecCcee-eeeeccce---EEEEEEeEEEEE--e---------------------------CCCeeeEEEcCCcEEEE
Q 032303 71 MWKTGKCKL-PWDWQVDQ---LVYIEEGEVRVV--P---------------------------EGSQRYMRFLAGDLIRY 117 (143)
Q Consensus 71 iWec~pg~f-~~~y~~dE---~~yILEG~V~vt--~---------------------------d~G~~~~e~~AGDlv~f 117 (143)
.|=..+|.+ ++|+|... +.+++.|+=+.. | +.+-. .++.|||++++
T Consensus 200 ~~mGp~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~-v~l~pGE~LfI 278 (451)
T 2yu1_A 200 CLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQR-IELKQGYTFVI 278 (451)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEE-EEECTTCEEEE
T ss_pred EEEccCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceE-EEECCCcEEEe
Confidence 456666666 57777543 668899987654 1 23445 78999999999
Q ss_pred cCCCEEEEEEecc
Q 032303 118 PKWFEADLFFNGP 130 (143)
Q Consensus 118 PkG~~gtW~V~e~ 130 (143)
|.|| ||..-.
T Consensus 279 PsGW---wH~V~n 288 (451)
T 2yu1_A 279 PSGW---IHAVYT 288 (451)
T ss_dssp CTTC---EEEEEC
T ss_pred CCCc---eEEEec
Confidence 9998 454433
No 147
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=78.42 E-value=5 Score=31.89 Aligned_cols=39 Identities=8% Similarity=0.055 Sum_probs=29.0
Q ss_pred ceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecc
Q 032303 86 DQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 86 dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
.=++|+++|+++| +|. .+.+||+++|..+-.-+-+-.++
T Consensus 182 ~~~~~v~~G~v~v---~g~---~l~~gd~~~~~~~~~l~l~a~~~ 220 (242)
T 1tq5_A 182 RVWIQVVKGNVTI---NGV---KASTSDGLAIWDEQAISIHADSD 220 (242)
T ss_dssp EEEEEEEESEEEE---TTE---EEETTCEEEEESCSCEEEEESSS
T ss_pred EEEEEEccCcEEE---CCE---EeCCCCEEEECCCCeEEEEeCCC
Confidence 3568999999998 343 58999999998876655544343
No 148
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=78.22 E-value=4.4 Score=29.59 Aligned_cols=41 Identities=20% Similarity=0.133 Sum_probs=30.5
Q ss_pred cCceeeeee--ccceEEEEEEeEEEEEeCCCeeeEEEcCCcEE
Q 032303 75 GKCKLPWDW--QVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLI 115 (143)
Q Consensus 75 ~pg~f~~~y--~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv 115 (143)
.+|..-+.- ..+.+..|++|+|++...+......+++||.|
T Consensus 154 ~~g~~i~~~g~~~~~~y~I~~G~v~v~~~~~~~~~~l~~g~~f 196 (246)
T 3of1_A 154 QPGETIIREGDQGENFYLIEYGAVDVSKKGQGVINKLKDHDYF 196 (246)
T ss_dssp CTTCEEECTTSBCCEEEEEEECEEEEEETTTEEEEEEETTCEE
T ss_pred CCCCEEEeCCCcCCEEEEEEecEEEEEEcCCceEEEcCCCCcc
Confidence 566554332 25788899999999998876444789999976
No 149
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=78.12 E-value=1.2 Score=31.17 Aligned_cols=21 Identities=29% Similarity=0.374 Sum_probs=17.1
Q ss_pred EEEcCCcEEEEcCCCEEEEEE
Q 032303 107 MRFLAGDLIRYPKWFEADLFF 127 (143)
Q Consensus 107 ~e~~AGDlv~fPkG~~gtW~V 127 (143)
-+++.||++++|+|+.-.=.-
T Consensus 8 ~~l~~G~v~vVPq~~~v~~~A 28 (93)
T 1dgw_Y 8 ATLSEGDIIVIPSSFPVALKA 28 (93)
T ss_dssp EEECTTCEEEECTTCCEEEEE
T ss_pred ceecCCcEEEECCCCceeEEe
Confidence 478999999999999765443
No 150
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=77.84 E-value=3.4 Score=27.53 Aligned_cols=62 Identities=16% Similarity=0.231 Sum_probs=37.3
Q ss_pred cCCCHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEe--CCCee-----eEEEcCCcEEE
Q 032303 54 RQVSPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVP--EGSQR-----YMRFLAGDLIR 116 (143)
Q Consensus 54 ~~ps~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~--d~G~~-----~~e~~AGDlv~ 116 (143)
.+.+++.+.++-. ....-...+|..=+.-. .+.+.+|++|.|++.. ++|.. ...+++||.+=
T Consensus 15 ~~l~~~~~~~l~~-~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG 85 (142)
T 3mdp_A 15 ASLTDEQLKDIAL-ISEEKSFPTGSVIFKENSKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFG 85 (142)
T ss_dssp HTSCHHHHHHHHH-TEEEEEECTTCEEECTTSBCCEEEEEEESCEEEECC---------CEEEEECTTCEEC
T ss_pred ccCCHHHHHHHHH-hhcEEecCCCCEEEeCCCCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEec
Confidence 3455666655532 23345557777654432 5789999999999974 34532 24689999874
No 151
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=77.46 E-value=2.5 Score=28.19 Aligned_cols=56 Identities=16% Similarity=0.217 Sum_probs=37.7
Q ss_pred CCHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEeCCCeeeEEEcCCcEE
Q 032303 56 VSPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLI 115 (143)
Q Consensus 56 ps~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv 115 (143)
.+++.+.++-. ....-.-.+|..=+.-. .+.+++|++|.|++...+ . ..+++||.+
T Consensus 22 l~~~~~~~l~~-~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~--~-~~~~~G~~~ 79 (138)
T 1vp6_A 22 LGPAVLVEIVR-ALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPN--P-VELGPGAFF 79 (138)
T ss_dssp CCHHHHHHHHH-HCEEEEECTTCEEECTTSCCCEEEEEEESCEEECSSS--C-EEECTTCEE
T ss_pred CCHHHHHHHHH-hhcEEEeCCCCEEEeCCCCcceEEEEEeeEEEEEeCC--c-ceECCCCEe
Confidence 45555544421 22355667777654432 578999999999998776 3 579999986
No 152
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=77.00 E-value=4.6 Score=28.85 Aligned_cols=46 Identities=13% Similarity=0.167 Sum_probs=30.8
Q ss_pred eeecCceeeeee--ccceEEEEEEeEEEEE--eCCCee--eEEEcCCcEEEE
Q 032303 72 WKTGKCKLPWDW--QVDQLVYIEEGEVRVV--PEGSQR--YMRFLAGDLIRY 117 (143)
Q Consensus 72 Wec~pg~f~~~y--~~dE~~yILEG~V~vt--~d~G~~--~~e~~AGDlv~f 117 (143)
-.-.+|..=+.- ..+.+++|++|.|++. .++|.. ...+++||.|-.
T Consensus 16 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~ 67 (207)
T 2oz6_A 16 RRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGE 67 (207)
T ss_dssp EEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEESC
T ss_pred EEECCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCccc
Confidence 444566654432 2478999999999997 345643 346789998743
No 153
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=76.57 E-value=3.5 Score=31.35 Aligned_cols=44 Identities=14% Similarity=0.014 Sum_probs=31.9
Q ss_pred eeeecCceeeeeec--cceEEEEEEeEEEEEeCCCeeeEEEcCCcEE
Q 032303 71 MWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLI 115 (143)
Q Consensus 71 iWec~pg~f~~~y~--~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv 115 (143)
.=.-.+|..=+.-. .+.+++|++|.|.+..++ .....+++||.|
T Consensus 64 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~g-~~~~~l~~G~~f 109 (291)
T 2qcs_B 64 PVSFIAGETVIQQGDEGDNFYVIDQGEMDVYVNN-EWATSVGEGGSF 109 (291)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEECCEEEEETT-EEEEEECTTCEE
T ss_pred EEEECCCCEEEeCCCCCceEEEEeeeEEEEEECC-eEEEEcCCCCcc
Confidence 34456666544332 578999999999999855 444789999987
No 154
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=75.61 E-value=9.4 Score=28.09 Aligned_cols=54 Identities=7% Similarity=0.033 Sum_probs=38.1
Q ss_pred Ccee-eeee--ccceEEEEEEeEEEEEeCCCee--eEEEcCCcE-EEEcCCCEEEEEEec
Q 032303 76 KCKL-PWDW--QVDQLVYIEEGEVRVVPEGSQR--YMRFLAGDL-IRYPKWFEADLFFNG 129 (143)
Q Consensus 76 pg~f-~~~y--~~dE~~yILEG~V~vt~d~G~~--~~e~~AGDl-v~fPkG~~gtW~V~e 129 (143)
||.. .|+. ..+|+...++|+++|..+||.. .+.+...+. +.+|+|.--+....+
T Consensus 44 ~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg~~~~~~~L~~~~~gL~IppgvWh~~~~~s 103 (141)
T 2pa7_A 44 GEEPRGFHAHKKLEQVLVCLNGSCRVILDDGNIIQEITLDSPAVGLYVGPAVWHEMHDFS 103 (141)
T ss_dssp SSCCEEEEEESSCCEEEEEEESCEEEEEECSSCEEEEEECCTTEEEEECTTCEEEEECCC
T ss_pred CCCEECcCcCCCceEEEEEEccEEEEEEECCcEEEEEEECCCCcEEEeCCCEEEEEEEcC
Confidence 6664 3554 4689999999999999999843 244555544 889998766555443
No 155
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=75.50 E-value=5.3 Score=28.34 Aligned_cols=61 Identities=11% Similarity=0.020 Sum_probs=38.7
Q ss_pred CCCHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEe--CCCee--eEEEcCCcEEE
Q 032303 55 QVSPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVP--EGSQR--YMRFLAGDLIR 116 (143)
Q Consensus 55 ~ps~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~--d~G~~--~~e~~AGDlv~ 116 (143)
+.+++.++.+-. ....-.-.+|..=+.-. .+.+++|++|.|++.- ++|.. ...+++||.+-
T Consensus 17 ~l~~~~~~~l~~-~~~~~~~~~g~~l~~~G~~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~g 83 (194)
T 3dn7_A 17 FLTDEDAGTLSA-FFQLKKVRKKETLLKTGEICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLS 83 (194)
T ss_dssp CCCHHHHHHHHT-TCEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEC
T ss_pred CCCHHHHHHHHH-hCEEEEEcCCCEEECCCCeeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEe
Confidence 345555555532 12345566777654432 5789999999999874 45643 23478999885
No 156
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=75.41 E-value=3.7 Score=29.47 Aligned_cols=32 Identities=34% Similarity=0.449 Sum_probs=24.0
Q ss_pred cceEEEEEEeEEEEEe--CCCee--eEEEcCCcEEE
Q 032303 85 VDQLVYIEEGEVRVVP--EGSQR--YMRFLAGDLIR 116 (143)
Q Consensus 85 ~dE~~yILEG~V~vt~--d~G~~--~~e~~AGDlv~ 116 (143)
.+.+++|++|.|++.- ++|.. ...+++||.|-
T Consensus 17 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G 52 (195)
T 3b02_A 17 ARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFG 52 (195)
T ss_dssp CCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEec
Confidence 4789999999999964 45643 24688999873
No 157
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=75.37 E-value=5.2 Score=27.65 Aligned_cols=60 Identities=10% Similarity=0.019 Sum_probs=36.5
Q ss_pred CCCHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEe-CCCee--eEEEcCCcEE
Q 032303 55 QVSPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVP-EGSQR--YMRFLAGDLI 115 (143)
Q Consensus 55 ~ps~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~-d~G~~--~~e~~AGDlv 115 (143)
+.+++.+..+-. ....-...+|..=+.-. .+.+++|++|.|.+.. .+|.. ...+++||.+
T Consensus 48 ~l~~~~l~~l~~-~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~g~~~~~~~~~~G~~f 112 (161)
T 3idb_B 48 NLDPEQMSQVLD-AMFEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSF 112 (161)
T ss_dssp TSCHHHHHHHHH-HCEEEEECTTCEEECTTSCCCEEEEEEESEEEEEEEETTEEEEEEEEESCCEE
T ss_pred cCCHHHHHHHHH-hcceeEeCCCCEEEeCCCCCcEEEEEEeCEEEEEEcCCCCeEEEEEcCCCCEe
Confidence 345555554421 12234556776654432 5789999999999974 34433 3468899965
No 158
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=75.37 E-value=3.4 Score=31.70 Aligned_cols=42 Identities=21% Similarity=0.207 Sum_probs=30.0
Q ss_pred ecCceeeeee--ccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEE
Q 032303 74 TGKCKLPWDW--QVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIR 116 (143)
Q Consensus 74 c~pg~f~~~y--~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~ 116 (143)
..+|..=+.- ..+.++.|++|.|.+..++... ..+.+||.|-
T Consensus 67 ~~~g~~i~~~G~~~~~~yiI~~G~v~v~~~g~~~-~~~~~G~~fG 110 (299)
T 3shr_A 67 YGKDSCIIKEGDVGSLVYVMEDGKVEVTKEGVKL-CTMGPGKVFG 110 (299)
T ss_dssp ECTTCEEECTTCBCCCEEEEEESCEEEEETTEEE-EEECTTCEES
T ss_pred ECCCCEEEcCCCcCceEEEEEEEEEEEEECCEEE-EEeCCCCeee
Confidence 3455543332 2578899999999998766444 7899999863
No 159
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=74.37 E-value=5.9 Score=28.79 Aligned_cols=47 Identities=17% Similarity=0.207 Sum_probs=31.0
Q ss_pred eeeecCceeeeee--ccceEEEEEEeEEEEE-eCCCee--eEEEcCCcEEEE
Q 032303 71 MWKTGKCKLPWDW--QVDQLVYIEEGEVRVV-PEGSQR--YMRFLAGDLIRY 117 (143)
Q Consensus 71 iWec~pg~f~~~y--~~dE~~yILEG~V~vt-~d~G~~--~~e~~AGDlv~f 117 (143)
.=.-.+|..=+.- ..+.+++|++|.|++. .++|.. ...+++||.|-.
T Consensus 29 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~~G~ 80 (220)
T 2fmy_A 29 EQRYSKKAILYTPNTERNLVFLVKSGRVRVYLAYEDKEFTLAILEAGDIFCT 80 (220)
T ss_dssp EEEECTTCEEECTTCSSCEEEEEEESEEEEEEECSSCEEEEEEEETTCEEES
T ss_pred eeEeCCCCEEECCCCCCCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEeCC
Confidence 3344566654332 2578899999999984 345643 246789998765
No 160
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=73.27 E-value=2.7 Score=32.93 Aligned_cols=35 Identities=17% Similarity=0.224 Sum_probs=29.5
Q ss_pred ceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCC
Q 032303 86 DQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWF 121 (143)
Q Consensus 86 dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~ 121 (143)
.-++|+|+|++.|+.++++. ..+.+||++.+-...
T Consensus 141 ~~~v~~l~G~~~v~~~~~~~-~~L~~~d~l~~~~~~ 175 (200)
T 1yll_A 141 TLLLFAQQDGVAISLQGQPR-GQLAAHDCLCAEGLQ 175 (200)
T ss_dssp EEEEEESSSCEEEEETTEEE-EEECTTCEEEEESCC
T ss_pred EEEEEEccCcEEEEcCCCce-eecCCCCEEEEeCCC
Confidence 46889999999998776666 799999999997664
No 161
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=72.89 E-value=6.6 Score=28.04 Aligned_cols=60 Identities=20% Similarity=0.180 Sum_probs=36.4
Q ss_pred CCHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEe--CCCee--eEEEcCCcEEE
Q 032303 56 VSPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVP--EGSQR--YMRFLAGDLIR 116 (143)
Q Consensus 56 ps~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~--d~G~~--~~e~~AGDlv~ 116 (143)
.+++.++++-. ....=...+|..=+.-. .+.+++|++|.|++.- ++|.. ...+++||.+-
T Consensus 7 l~~~~l~~l~~-~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 72 (210)
T 3ryp_A 7 QTDPTLEWFLS-HCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIG 72 (210)
T ss_dssp CCCHHHHHHHT-TSEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEES
T ss_pred CCHHHHHHHHH-hcEEEEeCCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEee
Confidence 34444544421 12234456666544332 5789999999999973 45643 24579999884
No 162
>3esg_A HUTD, putative uncharacterized protein; beta barrel, unknown function; 1.80A {Pseudomonas fluorescens} SCOP: b.82.1.0
Probab=72.31 E-value=5.8 Score=31.07 Aligned_cols=56 Identities=9% Similarity=0.219 Sum_probs=44.7
Q ss_pred Cceeeeeec-cceEEEEEEeE-EEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEe-cceEE
Q 032303 76 KCKLPWDWQ-VDQLVYIEEGE-VRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFN-GPYQE 133 (143)
Q Consensus 76 pg~f~~~y~-~dE~~yILEG~-V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~-e~vrK 133 (143)
.|.|. .|+ .+=++.+|+|. ++++.++..+ +.+.+++.+.|+-++...=+.. ++++-
T Consensus 57 ~g~FS-~FpG~dR~l~lL~G~gl~L~~~g~~~-~~L~~~~p~~F~G~~~v~a~L~~G~v~D 115 (193)
T 3esg_A 57 SGGFS-SFAGYQRVITVIQGAGMVLTVDGEEQ-RGLLPLQPFAFRGDSQVSCRLITGPIRD 115 (193)
T ss_dssp SEECC-CCTTCEEEEEEEESSCEEEEETTSCC-EEECBTCCEEEETTSCEEEEESSSCEEE
T ss_pred CCCCC-CCCCceEEEEEEcCCcEEEEeCCCcc-EecCCCCCEEeCCCCeEEEEECCCCEEE
Confidence 56665 454 78999999997 9999987666 7899999999999998877754 45543
No 163
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=71.52 E-value=7.5 Score=28.67 Aligned_cols=43 Identities=14% Similarity=0.168 Sum_probs=31.6
Q ss_pred cceEEEEEEeEEEEE--eCCCe----eeEEEcCCcEEEEcCCCEEEEEE
Q 032303 85 VDQLVYIEEGEVRVV--PEGSQ----RYMRFLAGDLIRYPKWFEADLFF 127 (143)
Q Consensus 85 ~dE~~yILEG~V~vt--~d~G~----~~~e~~AGDlv~fPkG~~gtW~V 127 (143)
..+...||+|++++. .++|+ ..+-+.+|+.+++|++..=+=+.
T Consensus 39 twg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~ 87 (127)
T 3bb6_A 39 VYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEA 87 (127)
T ss_dssp EEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEE
T ss_pred EEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEE
Confidence 358999999999887 34443 34678999999999986444443
No 164
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=70.83 E-value=15 Score=26.40 Aligned_cols=62 Identities=23% Similarity=0.151 Sum_probs=40.9
Q ss_pred ecCCCHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEe--CCCee--eEEEcCCcEE
Q 032303 53 ERQVSPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVP--EGSQR--YMRFLAGDLI 115 (143)
Q Consensus 53 e~~ps~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~--d~G~~--~~e~~AGDlv 115 (143)
=.+.+++.+.++- .....-...+|..=+.-. .+.+++|++|.|++.. ++|.. ...+++||.+
T Consensus 47 f~~l~~~~l~~l~-~~~~~~~~~~ge~i~~~G~~~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 47 FGDFSNEEVRYLC-SYMQCYAAPRDCQLLTEGDPGDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAII 114 (187)
T ss_dssp SCCCCHHHHHHHH-TTCEEEEECTTCEEECTTSCCCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEE
T ss_pred hhcCCHHHHHHHH-HhcEEEEeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCee
Confidence 3456677776663 234445567777654432 5789999999999875 34543 3478999976
No 165
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=70.57 E-value=13 Score=29.98 Aligned_cols=86 Identities=10% Similarity=-0.009 Sum_probs=59.2
Q ss_pred ecccccceeceEEecCCCHHHHhhcCCC---ceeeeeecCceeeeeec-cce-EEEEEEeEEEEEeCCCeeeEEEcCCcE
Q 032303 40 VEKPLEELYNVRVERQVSPERLKELDVS---RWSMWKTGKCKLPWDWQ-VDQ-LVYIEEGEVRVVPEGSQRYMRFLAGDL 114 (143)
Q Consensus 40 ~~~~~~e~~~I~ve~~ps~~rl~~lGv~---~wgiWec~pg~f~~~y~-~dE-~~yILEG~V~vt~d~G~~~~e~~AGDl 114 (143)
.-.+..+--|++|-|-.+...+..+|.+ +- .. .....|+.|=+ .-| +-|+|+|++.=.|.-|.. ..++|||+
T Consensus 12 ~~~~~~~G~g~~v~R~~~~~~~~~~gpf~~ld~-~~-~~~~gf~~HPHrg~EtVTyvl~G~~~H~DS~Gn~-~~i~~Gdv 88 (277)
T 2p17_A 12 TVQMTTNSPIHRSGSVLEPGNWQEYDPFLLLME-DI-FERGTFDVHPHRGIETVTYVISGELEHFDSKAGH-STLGPGDV 88 (277)
T ss_dssp ECCEEEEETTEEEEEEECSSCHHHHTTEEEEEE-EE-ECTTCCCCEEECSEEEEEEEEESCEEEEETTTEE-EEECTTCE
T ss_pred cceecccCCCeEEeecCCcccccccCCEEEEec-CC-CCCCCCCCCCCCCcEEEEEEEEeEEEEeeCCCCc-eEECCCeE
Confidence 3334455567777776555555566643 11 11 22335877644 345 779999999999998988 79999999
Q ss_pred EEEcCCCEEEEEEec
Q 032303 115 IRYPKWFEADLFFNG 129 (143)
Q Consensus 115 v~fPkG~~gtW~V~e 129 (143)
=.+-+| +|.++..-
T Consensus 89 QwMtAG-~GI~HsE~ 102 (277)
T 2p17_A 89 QWMTAG-RGVVHKED 102 (277)
T ss_dssp EEEECT-TCEEEEEE
T ss_pred EEEeCC-CCEEEEee
Confidence 999999 67777653
No 166
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=70.50 E-value=14 Score=29.83 Aligned_cols=31 Identities=19% Similarity=0.289 Sum_probs=24.5
Q ss_pred ceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcC-C
Q 032303 86 DQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPK-W 120 (143)
Q Consensus 86 dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPk-G 120 (143)
.=+.|+++|+++|. |+. ..+.+||+++|.. |
T Consensus 189 ~~~lyv~~G~v~v~---g~~-~~l~~~d~~~~~~~~ 220 (277)
T 2p17_A 189 NGFLYILEGSGVFG---ADN-IEGKAGQALFFSRHN 220 (277)
T ss_dssp EEEEEEEESEEEET---TTT-EEEETTEEEEECCCC
T ss_pred EEEEEEEeCeEEEC---CCc-eEeCCCcEEEEcCCC
Confidence 56899999999883 312 3689999999986 6
No 167
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=70.50 E-value=2.8 Score=29.55 Aligned_cols=25 Identities=12% Similarity=0.267 Sum_probs=19.1
Q ss_pred CCCee-eEEEcCCcEEEEcCCCEEEE
Q 032303 101 EGSQR-YMRFLAGDLIRYPKWFEADL 125 (143)
Q Consensus 101 d~G~~-~~e~~AGDlv~fPkG~~gtW 125 (143)
++|+. ...+++||.|.|++|+.|+=
T Consensus 50 ~~G~~~p~~VkvGD~Vlf~k~y~Gte 75 (97)
T 1pcq_O 50 ENGEVKPLDVKVGDIVIFNDGYGVKS 75 (97)
T ss_dssp TSSSCEECSCCTTCEEEECCCSSCEE
T ss_pred CCCCEEecccCCCCEEEECCccCCeE
Confidence 45652 25689999999999888873
No 168
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=69.30 E-value=5.5 Score=26.82 Aligned_cols=60 Identities=17% Similarity=0.154 Sum_probs=36.8
Q ss_pred CCCHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEeC--CCee--eEEEcCCcEE
Q 032303 55 QVSPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVPE--GSQR--YMRFLAGDLI 115 (143)
Q Consensus 55 ~ps~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~d--~G~~--~~e~~AGDlv 115 (143)
..+++.+.++-. ....-...+|..=+.-. .+.+++|++|.|++.-. +|.. ...+++||.+
T Consensus 22 ~l~~~~~~~l~~-~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 22 PLSPVQLQELLA-SSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTF 87 (154)
T ss_dssp TSCHHHHHHHHH-TCEEEEECTTCEEECTTSBCCEEEEEEESCEEEECCCC-----CCEEECTTEEE
T ss_pred CCCHHHHHHHHh-hCcEEEecCCCEEecCCCccceEEEEEeCEEEEEEECCCCCEEEEEEccCCCee
Confidence 345555554432 13345567777654432 57899999999999853 4542 3578999987
No 169
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=69.24 E-value=7.1 Score=28.46 Aligned_cols=46 Identities=15% Similarity=0.187 Sum_probs=30.7
Q ss_pred eeeecCceeeeee--ccceEEEEEEeEEEEE-eCCCee--eEEEcCCcEEE
Q 032303 71 MWKTGKCKLPWDW--QVDQLVYIEEGEVRVV-PEGSQR--YMRFLAGDLIR 116 (143)
Q Consensus 71 iWec~pg~f~~~y--~~dE~~yILEG~V~vt-~d~G~~--~~e~~AGDlv~ 116 (143)
.-.-.+|..=+.- ..+.+++|++|.|++. .++|.. ...+++||.|-
T Consensus 25 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~fG 75 (222)
T 1ft9_A 25 SKIHAKGSLVCTGEGDENGVFVVVDGRLRVYLVGEEREISLFYLTSGDMFC 75 (222)
T ss_dssp EEEECTTCEEECTTCCCCCEEEEEESEEEEEEEETTEEEEEEEEETTCEEE
T ss_pred EEEECCCCEEECCCCCCCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEec
Confidence 4445566654332 2478899999999985 345653 24678999886
No 170
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=68.07 E-value=8.2 Score=27.95 Aligned_cols=64 Identities=9% Similarity=0.147 Sum_probs=40.0
Q ss_pred EecCCCHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEe--CCCee--eEEEcCCcEEE
Q 032303 52 VERQVSPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVP--EGSQR--YMRFLAGDLIR 116 (143)
Q Consensus 52 ve~~ps~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~--d~G~~--~~e~~AGDlv~ 116 (143)
+=...+++.++.+-. ....-...+|..=+.-. .+.+++|++|.|++.- ++|.. ...+++||.+-
T Consensus 18 lf~~l~~~~~~~l~~-~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 87 (230)
T 3iwz_A 18 PSLTLDAGTIERFLA-HSHRRRYPTRTDVFRPGDPAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVG 87 (230)
T ss_dssp ----CCHHHHHHHHT-TSEEEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEES
T ss_pred hhccCCHHHHHHHHH-hCeEEEeCCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEE
Confidence 334556777766642 23345567777654432 5789999999999874 45643 34689999884
No 171
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=67.82 E-value=7.8 Score=25.80 Aligned_cols=61 Identities=18% Similarity=0.181 Sum_probs=37.6
Q ss_pred CCCHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEe--CCCee--eEEEcCCcEEE
Q 032303 55 QVSPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVP--EGSQR--YMRFLAGDLIR 116 (143)
Q Consensus 55 ~ps~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~--d~G~~--~~e~~AGDlv~ 116 (143)
+.+++.+.++-. ....-.-.+|..=+.-. .+.+++|++|.|.+.- ++|.. ...+++||.+-
T Consensus 15 ~l~~~~~~~l~~-~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 81 (149)
T 2pqq_A 15 ALDDEQSAELRA-SMSEVTLARGDTLFHEGDPGDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELIG 81 (149)
T ss_dssp TCCHHHHHHHHH-HCEEEEECTTCEEECTTSEECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEES
T ss_pred cCCHHHHHHHHH-hceEEEeCCCCEEECCCCCCCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEec
Confidence 345555554421 12345556776644432 4779999999999874 34543 34788999863
No 172
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=67.39 E-value=10 Score=27.77 Aligned_cols=62 Identities=10% Similarity=0.109 Sum_probs=39.3
Q ss_pred cCCCHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEe--CCCee--eEEEcCCcEEE
Q 032303 54 RQVSPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVP--EGSQR--YMRFLAGDLIR 116 (143)
Q Consensus 54 ~~ps~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~--d~G~~--~~e~~AGDlv~ 116 (143)
.+.+++.+..+-. ....=...+|..=+.-. .+.+++|++|.|++.. ++|.. ...+++||.+-
T Consensus 20 ~~l~~~~~~~l~~-~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G 87 (237)
T 3fx3_A 20 RSLPEQHVDALLS-QAVWRSYDRGETLFLQEEKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESFG 87 (237)
T ss_dssp HTSCHHHHHHHHT-TCEEEEECTTCEEECTTSCCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEEC
T ss_pred ccCCHHHHHHHHh-hCEEEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEec
Confidence 3455666655532 22344556776644432 5789999999999885 45643 34678999873
No 173
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=66.76 E-value=8.5 Score=27.97 Aligned_cols=45 Identities=13% Similarity=0.096 Sum_probs=30.6
Q ss_pred eeeecCceeeeeec--cceEEEEEEeEEEEEe--CCCee--eEEEcCCcEE
Q 032303 71 MWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVP--EGSQR--YMRFLAGDLI 115 (143)
Q Consensus 71 iWec~pg~f~~~y~--~dE~~yILEG~V~vt~--d~G~~--~~e~~AGDlv 115 (143)
.-.-.+|..=+.-. .+.+++|++|.|++.- ++|.. ...+++||.|
T Consensus 31 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 81 (227)
T 3d0s_A 31 PVDFPRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMF 81 (227)
T ss_dssp EEEECTTCEEECTTCCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEE
T ss_pred EEEeCCCCEEEcCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEE
Confidence 44556666544322 4778999999999874 35643 2468899987
No 174
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=66.68 E-value=10 Score=28.74 Aligned_cols=61 Identities=20% Similarity=0.176 Sum_probs=38.0
Q ss_pred CCCHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEe--CCCee--eEEEcCCcEEE
Q 032303 55 QVSPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVP--EGSQR--YMRFLAGDLIR 116 (143)
Q Consensus 55 ~ps~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~--d~G~~--~~e~~AGDlv~ 116 (143)
..+++.++.+-. ....-...+|..=+.-. .+.+++|++|.|++.- ++|.. ...+++||.|-
T Consensus 56 ~l~~~~l~~l~~-~~~~~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~G 122 (260)
T 3kcc_A 56 PQTDPTLEWFLS-HCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIG 122 (260)
T ss_dssp ---CHHHHHHHT-TSEEEEECTTCEEECTTCBCCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEES
T ss_pred CCCHHHHHHHHh-hCEEEEECCCCEEECCCCcCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEe
Confidence 345556655532 23355667777654432 5789999999999983 45543 35679999874
No 175
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=66.50 E-value=11 Score=30.81 Aligned_cols=35 Identities=17% Similarity=0.168 Sum_probs=23.0
Q ss_pred eEEEcCCcEEEEcCCCE-----E--EEEEecceEEEEEEEec
Q 032303 106 YMRFLAGDLIRYPKWFE-----A--DLFFNGPYQERYSFRAY 140 (143)
Q Consensus 106 ~~e~~AGDlv~fPkG~~-----g--tW~V~e~vrK~Y~~~a~ 140 (143)
++.++|||.+++|+|.. | .-||.+.---.|++-+|
T Consensus 159 ~v~l~pGd~~~ipaGt~HA~~~G~~~~Eiq~~SD~t~R~yDy 200 (319)
T 1qwr_A 159 RIKIKPGDFYYVPSGTLHALCKGALVLETQQNSDATYRVYDY 200 (319)
T ss_dssp EEECCTTCEEEECTTCCEEECSSEEEEEEEESCCCCEEEECT
T ss_pred EEEcCCCCEEEcCCCCceEecCCCeEEEEEeCCccEEEcccc
Confidence 38999999999999974 2 25654443334554444
No 176
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=66.30 E-value=6.6 Score=29.01 Aligned_cols=61 Identities=16% Similarity=0.152 Sum_probs=37.8
Q ss_pred CCCHHHHhhcCCC-ceeeeeecCceeeeeec--cceEEEEEEeEEEEEe--CCCee--eEEEcCCcEE
Q 032303 55 QVSPERLKELDVS-RWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVP--EGSQR--YMRFLAGDLI 115 (143)
Q Consensus 55 ~ps~~rl~~lGv~-~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~--d~G~~--~~e~~AGDlv 115 (143)
..+++.+.++-.. ..-.-.-.+|..=+.-. .+.+++|++|.|++.- ++|.. ...+++||.+
T Consensus 28 ~l~~~~~~~l~~~~~~~~~~~~~ge~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~f 95 (232)
T 1zyb_A 28 GLCHEDFTSILDKVKLHFIKHKAGETIIKSGNPCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLI 95 (232)
T ss_dssp TCCHHHHHHHHHTSCCEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEE
T ss_pred CCCHHHHHHHHhhCCcEEEEECCCCEEECCCCcccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCee
Confidence 4456666555321 13345556777644432 5788999999999863 44543 2367899987
No 177
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=65.90 E-value=37 Score=26.03 Aligned_cols=65 Identities=6% Similarity=-0.031 Sum_probs=40.2
Q ss_pred cCcee-eeeec--cceEEEEEEeEEEEEe----CCC-------eeeEEEcCCcEEEE-cCCCEEEEEEecce--EEEEEE
Q 032303 75 GKCKL-PWDWQ--VDQLVYIEEGEVRVVP----EGS-------QRYMRFLAGDLIRY-PKWFEADLFFNGPY--QERYSF 137 (143)
Q Consensus 75 ~pg~f-~~~y~--~dE~~yILEG~V~vt~----d~G-------~~~~e~~AGDlv~f-PkG~~gtW~V~e~v--rK~Y~~ 137 (143)
.||+. ++|=+ ...++.||+|+.+.+. ++| .. ..+.+||...| |++- .-.|..+- +-.-.+
T Consensus 78 ~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~-~~l~~G~v~~~~~~~g--iH~V~N~s~~~~avSl 154 (200)
T 3eln_A 78 GEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSE-RTLRENQCAYINDSIG--LHRVENVSHTEPAVSL 154 (200)
T ss_dssp CTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEE-EEECTTCEEEECTTTC--EEEEECCCSSCCEEEE
T ss_pred CCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccce-EEeCCCCEEEecCCCc--EEEEECCCCCCCEEEE
Confidence 34544 34433 4789999999999873 232 23 68999999999 5443 33443332 345556
Q ss_pred EeccC
Q 032303 138 RAYGD 142 (143)
Q Consensus 138 ~a~~~ 142 (143)
..||.
T Consensus 155 HvY~p 159 (200)
T 3eln_A 155 HLYSP 159 (200)
T ss_dssp EEEES
T ss_pred EeCCC
Confidence 66664
No 178
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=65.66 E-value=3.3 Score=34.04 Aligned_cols=58 Identities=19% Similarity=0.164 Sum_probs=36.8
Q ss_pred eeeeecCcee-eeeecc-ceEEEEEEeEEEEE--eC----------------C----------------CeeeEEEcCCc
Q 032303 70 SMWKTGKCKL-PWDWQV-DQLVYIEEGEVRVV--PE----------------G----------------SQRYMRFLAGD 113 (143)
Q Consensus 70 giWec~pg~f-~~~y~~-dE~~yILEG~V~vt--~d----------------~----------------G~~~~e~~AGD 113 (143)
.+|-..+|.. ..|+|. +=+...|.|+=++. +. + .-. ..++|||
T Consensus 170 ~l~~g~~g~~~~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~-~~L~pGD 248 (338)
T 3al5_A 170 VFRISSPGLQLWTHYDVMDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYE-CSLEAGD 248 (338)
T ss_dssp EEEEECTTCEEEEECCSSEEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEE-EEECTTC
T ss_pred eeEECCCCCCccceECCcccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEE-EEECCCC
Confidence 4566666554 457875 44555677875554 11 0 223 7889999
Q ss_pred EEEEcCCCEEEEEEecce
Q 032303 114 LIRYPKWFEADLFFNGPY 131 (143)
Q Consensus 114 lv~fPkG~~gtW~V~e~v 131 (143)
++++|.|| |+-...+
T Consensus 249 ~LyiP~gW---wH~v~~l 263 (338)
T 3al5_A 249 VLFIPALW---FHNVISE 263 (338)
T ss_dssp EEEECTTC---EEEEEES
T ss_pred EEEECCCC---eEEEeeC
Confidence 99999998 5554443
No 179
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=65.65 E-value=10 Score=31.00 Aligned_cols=43 Identities=19% Similarity=0.137 Sum_probs=31.6
Q ss_pred eecCceeeeeec--cceEEEEEEeEEEEEeCCCeeeEEEcCCcEE
Q 032303 73 KTGKCKLPWDWQ--VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLI 115 (143)
Q Consensus 73 ec~pg~f~~~y~--~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv 115 (143)
.-.+|..=+.-. .+.++.|++|.|.+...+......+++||.|
T Consensus 365 ~~~~g~~i~~~G~~~~~~yiI~~G~v~v~~~~~~~~~~l~~G~~f 409 (469)
T 1o7f_A 365 HAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDF 409 (469)
T ss_dssp ECSTTCEEECTTSCCCEEEEEEESEEEEEETTTEEEEEEETTCEE
T ss_pred EecCCCEEEeCCCcCCeEEEEEEeEEEEEEcCCeeEEEecCCCEE
Confidence 346776544432 5789999999999988765344789999976
No 180
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=65.63 E-value=22 Score=27.77 Aligned_cols=58 Identities=19% Similarity=0.286 Sum_probs=38.8
Q ss_pred ccceEEEEEEeEEEEEe----CCCe------eeEEEcCCcEEEEcCCCEEEEEEecce--EEEEEEEeccC
Q 032303 84 QVDQLVYIEEGEVRVVP----EGSQ------RYMRFLAGDLIRYPKWFEADLFFNGPY--QERYSFRAYGD 142 (143)
Q Consensus 84 ~~dE~~yILEG~V~vt~----d~G~------~~~e~~AGDlv~fPkG~~gtW~V~e~v--rK~Y~~~a~~~ 142 (143)
...-++.||+|+.+.+. ++|. . ..+.+||.+.|+.+.-..-.|..+. +-.-.+..||.
T Consensus 92 ~swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~-~~l~~G~v~~~~p~~g~IH~V~N~~~d~~avSLHvYg~ 161 (211)
T 3uss_A 92 RVWGLIGMLRGAEYSQPYAFDAGGRPHPSGAR-RRLEPGEVEALSPRIGDVHQVSNAFSDRTSISIHVYGA 161 (211)
T ss_dssp SSCEEEEEEESCEEEEEEEECTTSCEEECSCC-EEECTTCEEEEBTTTBCCEEEEESCSSSCEEEEEEESS
T ss_pred CeeEEEEeeeceEEEEEeeeCCCCCcccccce-EEecCCCEEEECCCCCCEEEEccCCCCCCEEEEEEcCC
Confidence 36789999999988753 4443 3 6899999999998754344444332 22455666664
No 181
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=65.61 E-value=4.3 Score=33.56 Aligned_cols=51 Identities=12% Similarity=0.251 Sum_probs=34.7
Q ss_pred eeeec-Cceeeeeecc-ceEEEEEEeEEEEE---eCC-----------------------------------CeeeEEEc
Q 032303 71 MWKTG-KCKLPWDWQV-DQLVYIEEGEVRVV---PEG-----------------------------------SQRYMRFL 110 (143)
Q Consensus 71 iWec~-pg~f~~~y~~-dE~~yILEG~V~vt---~d~-----------------------------------G~~~~e~~ 110 (143)
.|-.. -+.++.|||. +=+..-++|+=++. +.+ ... .+++
T Consensus 145 ~~~gp~g~~~~~H~D~~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~L~ 223 (342)
T 1vrb_A 145 VYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEI-VNLT 223 (342)
T ss_dssp EEEECSSCCCCSEECSSEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEE-EEEC
T ss_pred EEEeCCCCCCCCeECChhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceE-EEEC
Confidence 67665 3456778885 55666678875444 311 123 6899
Q ss_pred CCcEEEEcCCCE
Q 032303 111 AGDLIRYPKWFE 122 (143)
Q Consensus 111 AGDlv~fPkG~~ 122 (143)
|||++++|+||-
T Consensus 224 pGD~LyiP~gww 235 (342)
T 1vrb_A 224 PGTMLYLPRGLW 235 (342)
T ss_dssp TTCEEEECTTCE
T ss_pred CCcEEEeCCCcc
Confidence 999999999984
No 182
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=64.87 E-value=3.4 Score=34.17 Aligned_cols=57 Identities=12% Similarity=0.180 Sum_probs=39.2
Q ss_pred eeeecCcee-eeeecc-ceEEEEEEeEEEEE--eC-------------------------------------CCeeeEEE
Q 032303 71 MWKTGKCKL-PWDWQV-DQLVYIEEGEVRVV--PE-------------------------------------GSQRYMRF 109 (143)
Q Consensus 71 iWec~pg~f-~~~y~~-dE~~yILEG~V~vt--~d-------------------------------------~G~~~~e~ 109 (143)
+|=..+|.. ++|+|. +=+...|.|+=++. +. ..-. ..+
T Consensus 187 l~iG~~gs~t~~H~D~~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~-~~l 265 (349)
T 3d8c_A 187 LLIGMEGNVTPAHYGEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYE-TVV 265 (349)
T ss_dssp EEEECTTCEEEEECCSEEEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEE-EEE
T ss_pred EEEECCCCCccceECChhcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEE-EEE
Confidence 687777665 678874 56667788986555 11 1123 789
Q ss_pred cCCcEEEEcCCCEEEEEEecce
Q 032303 110 LAGDLIRYPKWFEADLFFNGPY 131 (143)
Q Consensus 110 ~AGDlv~fPkG~~gtW~V~e~v 131 (143)
+|||++++|.|| ||-...+
T Consensus 266 ~pGD~LyiP~gW---wH~V~~l 284 (349)
T 3d8c_A 266 GPGDVLYIPMYW---WHHIESL 284 (349)
T ss_dssp CTTCEEEECTTC---EEEEEEC
T ss_pred CCCCEEEECCCC---cEEEEEc
Confidence 999999999998 5544433
No 183
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=64.82 E-value=16 Score=32.36 Aligned_cols=53 Identities=17% Similarity=0.217 Sum_probs=35.8
Q ss_pred eeeeecCce--eeeeecc-ceEEEEEEeEEEEE--eCC-------------------Cee--eEEEcCCcEEEEcCCCE
Q 032303 70 SMWKTGKCK--LPWDWQV-DQLVYIEEGEVRVV--PEG-------------------SQR--YMRFLAGDLIRYPKWFE 122 (143)
Q Consensus 70 giWec~pg~--f~~~y~~-dE~~yILEG~V~vt--~d~-------------------G~~--~~e~~AGDlv~fPkG~~ 122 (143)
-.|-..+|. |+.|||. |=++.=++|+=+.. +.. +++ ...++|||++++|+||-
T Consensus 167 N~Y~tp~Gs~g~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~ 245 (489)
T 4diq_A 167 NVYLTPPNSQGFAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFI 245 (489)
T ss_dssp EEEEECSSBCCSCCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCE
T ss_pred eEEecCCCcccccCccCCcceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCc
Confidence 467777774 6788985 55666678865443 211 111 26899999999999973
No 184
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=64.67 E-value=2.3 Score=28.50 Aligned_cols=60 Identities=17% Similarity=0.240 Sum_probs=36.2
Q ss_pred CCCHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEe-CCCee--eE--EEcCCcEE
Q 032303 55 QVSPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVP-EGSQR--YM--RFLAGDLI 115 (143)
Q Consensus 55 ~ps~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~-d~G~~--~~--e~~AGDlv 115 (143)
+.+++.+.++-. ....-.-.+|..=+.-. .+.+++|++|.|++.. ++|.. .. .+++||.+
T Consensus 16 ~l~~~~~~~l~~-~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~g~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 16 NMDERLLDAICE-RLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFYNRSLLKEGDFC 82 (137)
T ss_dssp SCCHHHHHHHHH-HCBCCCBCTTEEEECTTSBCSEEEEEEECCCEEECCSSCSSSSSCEEECCTTCBS
T ss_pred hCCHHHHHHHHH-HheEEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEEcCCCcceeeeeeeecCCCEe
Confidence 345555554421 12234556676544332 4788999999999874 34543 12 78899976
No 185
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=64.39 E-value=11 Score=26.95 Aligned_cols=60 Identities=18% Similarity=0.179 Sum_probs=37.3
Q ss_pred CCHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEe--CCCee--eEEEcCCcEEE
Q 032303 56 VSPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVP--EGSQR--YMRFLAGDLIR 116 (143)
Q Consensus 56 ps~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~--d~G~~--~~e~~AGDlv~ 116 (143)
.+++.+..+-. ....-.-.+|..=+.-. .+.+++|++|.|++.- ++|.. ...+++||.+-
T Consensus 10 l~~~~~~~l~~-~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 75 (216)
T 4ev0_A 10 LAPEEVDLALS-YFQRRLYPQGKPIFYQGDLGQALYLVASGKVRLFRTHLGGQERTLALLGPGELFG 75 (216)
T ss_dssp CCHHHHHHHHT-TCEEEEECTTCEEECTTCBCCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEEC
T ss_pred CCHHHHHHHHH-hheEEEeCCCCEEEeCCCCCCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEe
Confidence 45555555432 12344556666544332 5789999999999974 45642 35689999873
No 186
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=64.11 E-value=11 Score=27.06 Aligned_cols=60 Identities=12% Similarity=0.186 Sum_probs=38.0
Q ss_pred CCCHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEe--CCCee--eEEEcCCcEE
Q 032303 55 QVSPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVP--EGSQR--YMRFLAGDLI 115 (143)
Q Consensus 55 ~ps~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~--d~G~~--~~e~~AGDlv 115 (143)
+.+++.++.+-. ....=.-.+|..=+.-. .+.+++|++|.|++.- ++|.. ...+++||.+
T Consensus 13 ~l~~~~~~~l~~-~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 78 (220)
T 3dv8_A 13 DLNTAQKKLISD-NLITQHVKKGTIIHNGNMDCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMC 78 (220)
T ss_dssp TSCHHHHHHHHT-TCEEEEECTTCEEEEGGGCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEE
T ss_pred cCCHHHHHHHHh-hCceEEeCCCCEEECCCCCcceEEEEEeceEEEEEECCCCCEEEEEecCCCCee
Confidence 345555555532 12344556777654432 5789999999999873 55653 2457899996
No 187
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=64.04 E-value=7.8 Score=27.80 Aligned_cols=31 Identities=23% Similarity=0.264 Sum_probs=23.1
Q ss_pred ceEEEEEEeEEEEEe--CCCee--eEEEcCCcEEE
Q 032303 86 DQLVYIEEGEVRVVP--EGSQR--YMRFLAGDLIR 116 (143)
Q Consensus 86 dE~~yILEG~V~vt~--d~G~~--~~e~~AGDlv~ 116 (143)
+.+++|++|.|++.- ++|.+ ...+++||.+-
T Consensus 26 ~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 60 (202)
T 2zcw_A 26 DRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFG 60 (202)
T ss_dssp CCCEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred CeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEee
Confidence 678899999999863 45654 24588999874
No 188
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=63.74 E-value=14 Score=27.82 Aligned_cols=44 Identities=16% Similarity=0.089 Sum_probs=29.4
Q ss_pred eecCceeeeee--ccceEEEEEEeEEEEEe--CCC-e--eeEEEcCCcEEE
Q 032303 73 KTGKCKLPWDW--QVDQLVYIEEGEVRVVP--EGS-Q--RYMRFLAGDLIR 116 (143)
Q Consensus 73 ec~pg~f~~~y--~~dE~~yILEG~V~vt~--d~G-~--~~~e~~AGDlv~ 116 (143)
...+|..-+.- ..+.++.|++|+|.+.. ++| + ....+++||.|=
T Consensus 184 ~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~fG 234 (291)
T 2qcs_B 184 QFEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYFG 234 (291)
T ss_dssp EECTTCEEECTTSCCCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEEC
T ss_pred EECCCCEEEeCCccCCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEec
Confidence 34566554433 25789999999999973 233 2 246899999873
No 189
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=62.91 E-value=13 Score=32.65 Aligned_cols=63 Identities=10% Similarity=-0.008 Sum_probs=42.5
Q ss_pred eeeecCcee-eeeeccce---EEEEEEeEEEEE--eC---------------------------CCeeeEEEcCCcEEEE
Q 032303 71 MWKTGKCKL-PWDWQVDQ---LVYIEEGEVRVV--PE---------------------------GSQRYMRFLAGDLIRY 117 (143)
Q Consensus 71 iWec~pg~f-~~~y~~dE---~~yILEG~V~vt--~d---------------------------~G~~~~e~~AGDlv~f 117 (143)
.|=..+|.+ ++|+|... +.+++.|+=++. |. .+-. .+++|||++++
T Consensus 270 ~~mG~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~-~~l~pGe~lfI 348 (488)
T 3kv5_D 270 CLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYK-CVVKQGHTLFV 348 (488)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEE-EEEETTCEEEE
T ss_pred EEEcCCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEE-EeeCCCCEEEe
Confidence 556666666 67887544 568899986554 22 1224 78999999999
Q ss_pred cCCCEEEEEEecceEEEEEE
Q 032303 118 PKWFEADLFFNGPYQERYSF 137 (143)
Q Consensus 118 PkG~~gtW~V~e~vrK~Y~~ 137 (143)
|.|| ||..-++..--+|
T Consensus 349 PsGW---wH~V~nledsIai 365 (488)
T 3kv5_D 349 PTGW---IHAVLTSQDCMAF 365 (488)
T ss_dssp CTTC---EEEEEEEEEEEEE
T ss_pred CCCc---eEEeeCCCCeEEE
Confidence 9998 6665555544443
No 190
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=62.62 E-value=32 Score=26.06 Aligned_cols=56 Identities=18% Similarity=0.202 Sum_probs=41.4
Q ss_pred cCceee-eeec--cceEEEEEEeEEEEEeCCCe---------eeEEEc---CCcEEEEcCCCEEEEEEecc
Q 032303 75 GKCKLP-WDWQ--VDQLVYIEEGEVRVVPEGSQ---------RYMRFL---AGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 75 ~pg~f~-~~y~--~dE~~yILEG~V~vt~d~G~---------~~~e~~---AGDlv~fPkG~~gtW~V~e~ 130 (143)
.+|..+ +||+ ..+++.+++|++.+...|+. ..+++. ..-.+.+|+|+--.....+.
T Consensus 61 ~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd 131 (174)
T 3ejk_A 61 LPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGD 131 (174)
T ss_dssp CBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTT
T ss_pred CCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccC
Confidence 466653 5554 78999999999999886642 136787 45699999999877766654
No 191
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=61.09 E-value=9.2 Score=27.80 Aligned_cols=45 Identities=11% Similarity=0.155 Sum_probs=30.3
Q ss_pred eeeecCceeeeeec--cceEEEEEEeEEEEEe--CCCee--eEEEcCCcEE
Q 032303 71 MWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVP--EGSQR--YMRFLAGDLI 115 (143)
Q Consensus 71 iWec~pg~f~~~y~--~dE~~yILEG~V~vt~--d~G~~--~~e~~AGDlv 115 (143)
.-.-.+|.+=+.-. .+.+++|++|.|++.- ++|.+ ...+++||.+
T Consensus 24 ~~~~~~g~~i~~~G~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 74 (213)
T 1o5l_A 24 VIVFRKGEIVKHQDDPIEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQII 74 (213)
T ss_dssp EEEECTTCEEECTTCBCCEEEEEEESCEEEEEECTTSCEEEEEEECSSEES
T ss_pred EEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEe
Confidence 44556666544322 4678899999999873 45653 2468899987
No 192
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=61.05 E-value=13 Score=27.70 Aligned_cols=64 Identities=6% Similarity=0.102 Sum_probs=39.4
Q ss_pred ecCCCHHHHhhcCCC--ceeeeeecCceeeeeec--cceEEEEEEeEEEEEe--CCCee--eEEEcCCcEEE
Q 032303 53 ERQVSPERLKELDVS--RWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVP--EGSQR--YMRFLAGDLIR 116 (143)
Q Consensus 53 e~~ps~~rl~~lGv~--~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~--d~G~~--~~e~~AGDlv~ 116 (143)
+..|-++.+.+|-.. ..-+-.-.+|..=+.-. .+.+++|++|.|++.- ++|.. ...+++||.+-
T Consensus 25 ~~~~~~~~l~~L~~~~~~~~~~~~~~ge~i~~~G~~~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~G 96 (243)
T 3la7_A 25 QDKALANVFRQMATGAFPPVVETFERNKTIFFPGDPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFG 96 (243)
T ss_dssp -CHHHHHHHHHHCCSSCCCEEEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEES
T ss_pred CCchHHHHHHHHhhccchheeEEECCCCEEEcCCCCCceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEc
Confidence 333446666666431 12245567777654432 4788999999999874 45643 34579999763
No 193
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=59.73 E-value=13 Score=26.97 Aligned_cols=59 Identities=15% Similarity=0.209 Sum_probs=35.6
Q ss_pred CCHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEe--CCCee--eEEEcCCcEE
Q 032303 56 VSPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVP--EGSQR--YMRFLAGDLI 115 (143)
Q Consensus 56 ps~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~--d~G~~--~~e~~AGDlv 115 (143)
.+++.+.++-. ....-.-.+|..=+.-. .+.+++|++|.|++.- ++|.. ...+++||.+
T Consensus 21 l~~~~~~~l~~-~~~~~~~~~g~~i~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 85 (232)
T 2gau_A 21 LNEEERELLDK-EIQPFPCKKASTVFSEGDIPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFF 85 (232)
T ss_dssp CCHHHHHHHHH-HCEEEEECTTCEEECTTCCCCEEEEEEESCEEEEC-----CCCEEEEECTTCEE
T ss_pred CCHHHHHHHHh-hCeEEEECCCCEEEeCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEe
Confidence 45555555431 22345556776544422 4678899999999984 24432 3578999987
No 194
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=59.14 E-value=14 Score=27.21 Aligned_cols=47 Identities=11% Similarity=0.263 Sum_probs=29.2
Q ss_pred eeecCceeeeee--ccceEEEEEEeEEEEEe--CCCee-eEEEcCCcEEEEc
Q 032303 72 WKTGKCKLPWDW--QVDQLVYIEEGEVRVVP--EGSQR-YMRFLAGDLIRYP 118 (143)
Q Consensus 72 Wec~pg~f~~~y--~~dE~~yILEG~V~vt~--d~G~~-~~e~~AGDlv~fP 118 (143)
-.-.+|.+=+.- ..+.+++|++|.|++.- ++|.. .+.+-+||.|-..
T Consensus 21 ~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~G~~~Ge~ 72 (238)
T 2bgc_A 21 KQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMS 72 (238)
T ss_dssp EEEETTCEEECTTCCCCEEEEEEESEEEEEEECTTSCEEEEEEEESSEEEES
T ss_pred EEECCCCEEEeCCCCCceEEEEEecEEEEEEECCCCCEEEEEEcCCCEecch
Confidence 344556554332 24678899999999864 45543 2344499987543
No 195
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=57.89 E-value=8.4 Score=25.62 Aligned_cols=20 Identities=15% Similarity=0.285 Sum_probs=15.2
Q ss_pred eeeccceEEEEEEeEEEEEe
Q 032303 81 WDWQVDQLVYIEEGEVRVVP 100 (143)
Q Consensus 81 ~~y~~dE~~yILEG~V~vt~ 100 (143)
|+-.+.|+.|+++|++.+..
T Consensus 53 ~hprA~ei~~V~~G~~~v~~ 72 (79)
T 1dgw_X 53 YNSRATVILVANEGRAEVEL 72 (79)
T ss_dssp EESSCEEEEEEEESCEEEEE
T ss_pred cCCCCcEEEEEEeceEEEEE
Confidence 34458999999999776653
No 196
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=55.70 E-value=38 Score=27.51 Aligned_cols=83 Identities=18% Similarity=0.135 Sum_probs=56.5
Q ss_pred cccceeceEEecCCCHHHHhhcCCCceeeee---e-cCceeeeeec-cce-EEEEE-EeEEEEEeCCCeeeEEEcCCcEE
Q 032303 43 PLEELYNVRVERQVSPERLKELDVSRWSMWK---T-GKCKLPWDWQ-VDQ-LVYIE-EGEVRVVPEGSQRYMRFLAGDLI 115 (143)
Q Consensus 43 ~~~e~~~I~ve~~ps~~rl~~lGv~~wgiWe---c-~pg~f~~~y~-~dE-~~yIL-EG~V~vt~d~G~~~~e~~AGDlv 115 (143)
+..+--|++|-|-.+...+..+|. +-.+. - .+..|+.|=+ .-| +-|+| +|++.=.|.-|.. ..|+|||+=
T Consensus 15 ~~~~G~G~~v~R~~~~~~~~~~gp--f~~ld~~~~~~~~Gf~~HPHrg~EtVTyvl~~G~~~H~DS~Gn~-~~i~~GdvQ 91 (290)
T 1j1l_A 15 EQSEGVGARVRRSIGRPELKNLDP--FLLFDEFKGGRPGGFPDHPHRGFETVSYLLEGGSMAHEDFCGHT-GKMNPGDLQ 91 (290)
T ss_dssp EEEETBTEEEEECTTSTTCCCCTT--EEEEEEEEECTTCBEEEEEEBSEEEEEEECSSSCEEEEETTSCE-EEECTTCEE
T ss_pred ccccCCCeEEEEeCCCccccccCc--EEEEEccccCCCCCCCCCCCCCeEEEEEECcceEEEEeeCCCCc-eEECCCcEE
Confidence 333344677777755444444543 22222 2 3335888754 456 66899 9999999998988 799999999
Q ss_pred EEcCCCEEEEEEec
Q 032303 116 RYPKWFEADLFFNG 129 (143)
Q Consensus 116 ~fPkG~~gtW~V~e 129 (143)
.+-+| +|.++..-
T Consensus 92 wMtAG-~GI~HsE~ 104 (290)
T 1j1l_A 92 WMTAG-RGILHAEM 104 (290)
T ss_dssp EEECT-TCEEEEEE
T ss_pred EEeCC-CCEEEEeE
Confidence 99999 57777654
No 197
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=55.34 E-value=17 Score=33.46 Aligned_cols=62 Identities=18% Similarity=0.071 Sum_probs=37.0
Q ss_pred ecCCCHHHHhhcCCCceeeeeecCceeeeee-c-cceEEEEEEeEEEEEeCC-CeeeEEEcCCcEE
Q 032303 53 ERQVSPERLKELDVSRWSMWKTGKCKLPWDW-Q-VDQLVYIEEGEVRVVPEG-SQRYMRFLAGDLI 115 (143)
Q Consensus 53 e~~ps~~rl~~lGv~~wgiWec~pg~f~~~y-~-~dE~~yILEG~V~vt~d~-G~~~~e~~AGDlv 115 (143)
-.+.+...+.+|...-...--...|+.=+.- + .+.+..|++|+|.|+..+ +.. .++++||.|
T Consensus 345 f~~Ls~~v~r~L~~~l~~~~~~kaGtvI~rQGE~gds~YIIlsG~V~V~~~~~~~v-~~L~~Gd~F 409 (999)
T 4f7z_A 345 LSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVV-CTLHEGDDF 409 (999)
T ss_dssp GTTSCHHHHHHHTTTCEEEEESSTTCEEECTTSBCCEEEEEEESEEEEEETTTEEE-EEEETTCEE
T ss_pred HhcCCHHHHHHHHHhhhhheeccCCCEEEeCCCcCCeEEEEEeeEEEEEEcCCcce-EEecCCCcc
Confidence 3455555555554321111112445543332 2 477888999999998654 454 789999987
No 198
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=55.27 E-value=8 Score=33.01 Aligned_cols=59 Identities=7% Similarity=0.005 Sum_probs=39.4
Q ss_pred eeeecCcee-eeeeccce---EEEEEEeEEEEEe-----------------------------CCCeeeEEEcCCcEEEE
Q 032303 71 MWKTGKCKL-PWDWQVDQ---LVYIEEGEVRVVP-----------------------------EGSQRYMRFLAGDLIRY 117 (143)
Q Consensus 71 iWec~pg~f-~~~y~~dE---~~yILEG~V~vt~-----------------------------d~G~~~~e~~AGDlv~f 117 (143)
.|=..+|++ ++|+|... ..+++.|+=++.- +.+-. ..++|||++++
T Consensus 151 l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~e-v~l~pGEtLfI 229 (371)
T 3k3o_A 151 CLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYK-CSVKQGQTLFI 229 (371)
T ss_dssp EEEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEE-EEEETTCEEEE
T ss_pred EEEcCCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEE-EEECCCcEEEe
Confidence 555666666 67888655 4589999866541 11234 78999999999
Q ss_pred cCCCEEEEEEecceEE
Q 032303 118 PKWFEADLFFNGPYQE 133 (143)
Q Consensus 118 PkG~~gtW~V~e~vrK 133 (143)
|.|| |+..-+...
T Consensus 230 PsGW---wH~V~nled 242 (371)
T 3k3o_A 230 PTGW---IHAVLTPVD 242 (371)
T ss_dssp CTTC---EEEEEEEEE
T ss_pred CCCC---eEEEecCCC
Confidence 9997 554444433
No 199
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=55.13 E-value=17 Score=26.99 Aligned_cols=59 Identities=14% Similarity=0.130 Sum_probs=36.2
Q ss_pred CHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEe--CCCee--eEEEcCCcEEE
Q 032303 57 SPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVP--EGSQR--YMRFLAGDLIR 116 (143)
Q Consensus 57 s~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~--d~G~~--~~e~~AGDlv~ 116 (143)
+++.++.+-. ....-.-.+|..=+.-. .+.+++|++|.|++.- ++|.. ...+++||.+-
T Consensus 21 ~~~~l~~l~~-~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G 85 (250)
T 3e6c_C 21 PIEKLRNYTQ-MGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIG 85 (250)
T ss_dssp CCGGGGGGGG-GSEEEEECTTCEEECTTCCCCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred CHHHHHHHHh-hCeEEEECCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEe
Confidence 4444544431 22344556666544322 4789999999999864 45654 24578999874
No 200
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=54.82 E-value=12 Score=27.30 Aligned_cols=61 Identities=16% Similarity=0.136 Sum_probs=36.2
Q ss_pred CCCHHHHhhcCCCceeeeeecCceeeeee--ccceEEEEEEeEEEEEe--CCCee--eEEEcCCcEEE
Q 032303 55 QVSPERLKELDVSRWSMWKTGKCKLPWDW--QVDQLVYIEEGEVRVVP--EGSQR--YMRFLAGDLIR 116 (143)
Q Consensus 55 ~ps~~rl~~lGv~~wgiWec~pg~f~~~y--~~dE~~yILEG~V~vt~--d~G~~--~~e~~AGDlv~ 116 (143)
+.+++.+.++-. ..-.-...+|..=+.- ..+.+++|++|.|++.. ++|.. ...+++||.+-
T Consensus 16 ~l~~~~~~~l~~-~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 82 (231)
T 3e97_A 16 NVPEDAMREALK-VVTERNFQPDELVVEQDAEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVG 82 (231)
T ss_dssp TCCHHHHHHHHH-TEEEEEECTTCBCCCTTCTTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEES
T ss_pred cCCHHHHHHHHH-hcEEEEECCCCEEEeCCCCCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEe
Confidence 345555555431 1234445666654332 25789999999999875 45543 35689999874
No 201
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=53.50 E-value=8.8 Score=33.45 Aligned_cols=58 Identities=7% Similarity=-0.029 Sum_probs=39.3
Q ss_pred eeeecCcee-eeeeccce---EEEEEEeEEEEEe--C---------------------------CCeeeEEEcCCcEEEE
Q 032303 71 MWKTGKCKL-PWDWQVDQ---LVYIEEGEVRVVP--E---------------------------GSQRYMRFLAGDLIRY 117 (143)
Q Consensus 71 iWec~pg~f-~~~y~~dE---~~yILEG~V~vt~--d---------------------------~G~~~~e~~AGDlv~f 117 (143)
.|=..+|++ ++|+|... ..+++.|+=+..- . .+-. .+++|||++++
T Consensus 235 ~~mG~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~-v~l~pGetlfI 313 (447)
T 3kv4_A 235 CLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYK-CSVKQGQTLFI 313 (447)
T ss_dssp EEEECTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEE-EEEETTCEEEE
T ss_pred EEEeCCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEE-EEECCCcEEec
Confidence 445566666 57887554 5689999866641 1 1234 78999999999
Q ss_pred cCCCEEEEEEecceE
Q 032303 118 PKWFEADLFFNGPYQ 132 (143)
Q Consensus 118 PkG~~gtW~V~e~vr 132 (143)
|.|| ||-.-+..
T Consensus 314 PsGW---wH~V~nle 325 (447)
T 3kv4_A 314 PTGW---IHAVLTPV 325 (447)
T ss_dssp CTTC---EEEEEESS
T ss_pred CCCC---eEEEecCC
Confidence 9998 66544443
No 202
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=52.08 E-value=26 Score=26.58 Aligned_cols=58 Identities=19% Similarity=0.141 Sum_probs=35.0
Q ss_pred CHHHHhhcCCCceeeeeecCceeeeee--ccceEEEEEEeEEEEEeCC---Cee--eEEEcCCcEE
Q 032303 57 SPERLKELDVSRWSMWKTGKCKLPWDW--QVDQLVYIEEGEVRVVPEG---SQR--YMRFLAGDLI 115 (143)
Q Consensus 57 s~~rl~~lGv~~wgiWec~pg~f~~~y--~~dE~~yILEG~V~vt~d~---G~~--~~e~~AGDlv 115 (143)
+++.+.++-. ....-...+|..=+.- ..+.++.|++|+|++...+ |.. ...+++||.|
T Consensus 169 ~~~~l~~l~~-~~~~~~~~~g~~I~~~G~~~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~f 233 (299)
T 3shr_A 169 PEEILSKLAD-VLEETHYENGEYIIRQGARGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWF 233 (299)
T ss_dssp CHHHHHHHTT-TCEEEEECTTCEEECTTCEECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEE
T ss_pred CHHHHHHHHH-hccEEEECCCCEEEeCCCCCCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEe
Confidence 4444444432 2233444666654332 2478899999999998653 432 3578999987
No 203
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=51.46 E-value=12 Score=31.15 Aligned_cols=55 Identities=11% Similarity=-0.082 Sum_probs=38.2
Q ss_pred eccceEEEE-EEeEEEEEeCCCeeeEEEcCCcEEEEcCCCE-EEEEEec--ceEEEEEEEe
Q 032303 83 WQVDQLVYI-EEGEVRVVPEGSQRYMRFLAGDLIRYPKWFE-ADLFFNG--PYQERYSFRA 139 (143)
Q Consensus 83 y~~dE~~yI-LEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~-gtW~V~e--~vrK~Y~~~a 139 (143)
.+..|+|.| |.|.++|+.+ |+. .+++.-|.+.+|+|.+ -+-.... .=-|+|...|
T Consensus 76 l~~rE~~iV~lgG~~~V~vd-g~~-f~lg~~dalYVp~G~~~v~~as~d~~~~a~fav~sA 134 (289)
T 1ywk_A 76 LERRELGVINIGGPGFIEID-GAK-ETMKKQDGYYIGKETKHVRFSSENPDNPAKFYISCV 134 (289)
T ss_dssp TTTEEEEEEECSSCEEEEET-TEE-EEECTTCEEEECTTCCCEEEEESCTTSCCCEEEEEE
T ss_pred CCCcEEEEEEccCeEEEEEC-CEE-EecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEEcc
Confidence 356788876 5889999986 556 5999999999999976 4444311 1135666543
No 204
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=51.40 E-value=8 Score=32.16 Aligned_cols=50 Identities=10% Similarity=-0.011 Sum_probs=35.2
Q ss_pred eeeecCcee-eeeeccce---EEEEEEeEEEEE--eCC-----------------------------------------C
Q 032303 71 MWKTGKCKL-PWDWQVDQ---LVYIEEGEVRVV--PEG-----------------------------------------S 103 (143)
Q Consensus 71 iWec~pg~f-~~~y~~dE---~~yILEG~V~vt--~d~-----------------------------------------G 103 (143)
+|=..+|.. ++|+|..+ +..+|.|+=++. +.+ +
T Consensus 176 ~~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~~~ 255 (336)
T 3k2o_A 176 FVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKP 255 (336)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGGCC
T ss_pred EEECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhcccccCce
Confidence 577777665 67888665 788889964432 210 1
Q ss_pred eeeEEEcCCcEEEEcCCC
Q 032303 104 QRYMRFLAGDLIRYPKWF 121 (143)
Q Consensus 104 ~~~~e~~AGDlv~fPkG~ 121 (143)
-. ..++|||++++|.||
T Consensus 256 ~~-~~l~pGd~l~iP~gw 272 (336)
T 3k2o_A 256 LE-ILQKPGETVFVPGGW 272 (336)
T ss_dssp EE-EEECTTCEEEECTTC
T ss_pred EE-EEECCCCEEEeCCCC
Confidence 23 679999999999998
No 205
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=51.33 E-value=27 Score=30.00 Aligned_cols=62 Identities=8% Similarity=-0.045 Sum_probs=40.5
Q ss_pred eeeecCcee-eeeeccce---EEEEEEeEEEEE--eC---------------------------CCeeeEEEcCCcEEEE
Q 032303 71 MWKTGKCKL-PWDWQVDQ---LVYIEEGEVRVV--PE---------------------------GSQRYMRFLAGDLIRY 117 (143)
Q Consensus 71 iWec~pg~f-~~~y~~dE---~~yILEG~V~vt--~d---------------------------~G~~~~e~~AGDlv~f 117 (143)
.|=..+|++ ++|+|..- +.+++.|+=++. +. .+-. ..+.|||++++
T Consensus 179 l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~-v~l~pGe~lfI 257 (397)
T 3kv9_A 179 CLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYK-CVVKQGHTLFV 257 (397)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEE-EEEETTCEEEE
T ss_pred EEEcCCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEE-EEECCCCEEEe
Confidence 555566666 56777433 568889875543 11 1233 68999999999
Q ss_pred cCCCEEEEEEecceEEEEE
Q 032303 118 PKWFEADLFFNGPYQERYS 136 (143)
Q Consensus 118 PkG~~gtW~V~e~vrK~Y~ 136 (143)
|.|| ||-..++..--+
T Consensus 258 PsGW---~H~V~nledSIa 273 (397)
T 3kv9_A 258 PTGW---IHAVLTSQDCMA 273 (397)
T ss_dssp CTTC---EEEEEEEEEEEE
T ss_pred CCCC---eEEccCCcCeEE
Confidence 9998 665555544333
No 206
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=51.21 E-value=10 Score=32.64 Aligned_cols=60 Identities=8% Similarity=0.023 Sum_probs=39.0
Q ss_pred eeeecCcee-eeeeccc---eEEEEEEeEEEEEe-----------------------------CCCeeeEEEcCCcEEEE
Q 032303 71 MWKTGKCKL-PWDWQVD---QLVYIEEGEVRVVP-----------------------------EGSQRYMRFLAGDLIRY 117 (143)
Q Consensus 71 iWec~pg~f-~~~y~~d---E~~yILEG~V~vt~-----------------------------d~G~~~~e~~AGDlv~f 117 (143)
.|=..+|.+ ++|+|.. =..+++.|+=+..- +.+-. .+++|||++++
T Consensus 178 ~~mGp~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~e-v~l~pGEtlfI 256 (392)
T 3pua_A 178 CLICVKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYK-CIVKQGQTLFI 256 (392)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEE-EEEETTCEEEE
T ss_pred EEEeCCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEE-EEECCCcEEee
Confidence 344455555 6777754 36788999866542 12334 78999999999
Q ss_pred cCCCEEEEEEecceEEE
Q 032303 118 PKWFEADLFFNGPYQER 134 (143)
Q Consensus 118 PkG~~gtW~V~e~vrK~ 134 (143)
|.|| ||..-+...-
T Consensus 257 PsGW---wH~V~nledS 270 (392)
T 3pua_A 257 PSGW---IYATLTPVDC 270 (392)
T ss_dssp CTTC---EEEEEEEEEE
T ss_pred CCCc---eEEEecCCCE
Confidence 9997 5554444443
No 207
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=49.19 E-value=13 Score=30.67 Aligned_cols=56 Identities=14% Similarity=-0.068 Sum_probs=39.1
Q ss_pred eeccceEEEE-EEeEEEEEeCCCeeeEEEcCCcEEEEcCCCE-EEEEEecc--eEEEEEEEe
Q 032303 82 DWQVDQLVYI-EEGEVRVVPEGSQRYMRFLAGDLIRYPKWFE-ADLFFNGP--YQERYSFRA 139 (143)
Q Consensus 82 ~y~~dE~~yI-LEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~-gtW~V~e~--vrK~Y~~~a 139 (143)
-.+..|+|.| |.|.++|+.+ |+. .+++.-|.+.+|+|.+ -+-..... =-|+|...|
T Consensus 75 fl~~rE~~iV~l~G~~~V~vd-G~~-f~lg~~dalYVp~g~~~v~~as~da~~~a~fav~sA 134 (282)
T 1xru_A 75 FLERRELGVINIGGAGTITVD-GQC-YEIGHRDALYVGKGAKEVVFASIDTGTPAKFYYNCA 134 (282)
T ss_dssp TTTTEEEEEEECSSCEEEEET-TEE-EEECTTCEEEECTTCCCEEEEESCTTSCCCEEEEEE
T ss_pred ccCCcEEEEEEccCeEEEEEC-CEE-EecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEEcc
Confidence 3356788876 5899999986 555 5999999999999986 44443321 135666543
No 208
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=49.12 E-value=19 Score=27.87 Aligned_cols=61 Identities=15% Similarity=0.168 Sum_probs=37.8
Q ss_pred cCCCHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEe--CCCe-eeEEEcCCcEE
Q 032303 54 RQVSPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVP--EGSQ-RYMRFLAGDLI 115 (143)
Q Consensus 54 ~~ps~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~--d~G~-~~~e~~AGDlv 115 (143)
.+.+++.+.++-. ....=...+|..=+.-. .+.++.|++|.|++.. ++|+ ....+++||.|
T Consensus 22 ~~l~~~~~~~l~~-~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~f 87 (333)
T 4ava_A 22 QGCPAEGLVSLAA-SVQPLRAAAGQVLLRQGEPAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIV 87 (333)
T ss_dssp TTCCHHHHHHHHH-HCEEEEECTTCEEECTTSBCCCEEEEEECCEEEEEECTTCCEEEEEECTTCEE
T ss_pred hcCCHHHHHHHHh-hCeEEEECCCCEEEeCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEe
Confidence 4456666655521 22233446666544432 5789999999999975 3443 23678999986
No 209
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=48.77 E-value=17 Score=28.32 Aligned_cols=54 Identities=13% Similarity=0.202 Sum_probs=42.2
Q ss_pred Cceeeeeec-cceEEEEEEeE-EEEEeCCCeeeEEE-cCCcEEEEcCCCEEEEEEe-cceE
Q 032303 76 KCKLPWDWQ-VDQLVYIEEGE-VRVVPEGSQRYMRF-LAGDLIRYPKWFEADLFFN-GPYQ 132 (143)
Q Consensus 76 pg~f~~~y~-~dE~~yILEG~-V~vt~d~G~~~~e~-~AGDlv~fPkG~~gtW~V~-e~vr 132 (143)
.|.|. .|+ .+=++.+|+|. ++++.++... + + .+++.+.|+-++...-+.. .+++
T Consensus 52 ~g~FS-~FpGidR~i~lL~G~g~~L~~~~~~~-~-L~~~~~p~~F~G~~~v~a~L~~G~~~ 109 (200)
T 1yll_A 52 SGGFS-GFAGYQRIISVLEGGGMRLRVDGAES-A-PLRARQAFAFSGDSEVHCTLLDGAIR 109 (200)
T ss_dssp CEEEC-CCTTCEEEEEEEESSCEEEEETTEEC-C-CBCBTCCEEEETTSCEEEEESSSCEE
T ss_pred CCCCC-CCCCccEEEEEEeCCcEEEecCCCcc-c-cCCCCCcEEeCCCCcEEEEECCCCEE
Confidence 56665 454 78999999998 9999988765 5 7 9999999999988877754 3444
No 210
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=48.01 E-value=8.2 Score=31.46 Aligned_cols=42 Identities=17% Similarity=0.157 Sum_probs=29.6
Q ss_pred eecCceeeeee--ccceEEEEEEeEEEEEeCCCeeeEEEcCCcEE
Q 032303 73 KTGKCKLPWDW--QVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLI 115 (143)
Q Consensus 73 ec~pg~f~~~y--~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv 115 (143)
...+|..=+.- ..+.++.|++|.|.+..++... ..+++||.|
T Consensus 157 ~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~v-~~l~~G~~f 200 (381)
T 4din_B 157 THIAGETVIQQGNEGDNFYVVDQGEVDVYVNGEWV-TNISEGGSF 200 (381)
T ss_dssp ECCTTCBSSCTTSBCCEEEECSSSEEEEEETTEEE-EEEESSCCB
T ss_pred EECCCCEEEeCCCCCCeEEEEEeeEEEEEECCeEe-eeCCCCCEE
Confidence 33555543332 2578999999999999865444 789999976
No 211
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=47.63 E-value=22 Score=29.02 Aligned_cols=61 Identities=11% Similarity=0.012 Sum_probs=38.0
Q ss_pred CCCHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEe--CCC----eeeEEEcCCcEEE
Q 032303 55 QVSPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVP--EGS----QRYMRFLAGDLIR 116 (143)
Q Consensus 55 ~ps~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~--d~G----~~~~e~~AGDlv~ 116 (143)
+.+++.+.++-. ..-.-...+|..=+.-. .+.+++|++|.|.+.- .+| .....+++||.|=
T Consensus 52 ~l~~~~~~~l~~-~~~~~~~~~g~~i~~~Gd~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fG 120 (469)
T 1o7f_A 52 KFHPNLLRQICL-CGYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFG 120 (469)
T ss_dssp TCCHHHHHHHHH-HCEEEEECTTCEEECTTSBCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEEC
T ss_pred cCCHHHHHHHHH-hceEEEECCCCEEEeCCCCCCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcc
Confidence 445555555421 11234556776644432 5789999999999965 344 2345789999874
No 212
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=47.42 E-value=88 Score=24.19 Aligned_cols=36 Identities=11% Similarity=0.087 Sum_probs=28.8
Q ss_pred cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEE
Q 032303 85 VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFF 127 (143)
Q Consensus 85 ~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V 127 (143)
..|+ +||+|++. + ++. .+.+||-+.+|.|..-+...
T Consensus 166 G~Ei-lVL~G~~~--d-~~~---~~~~GsWlR~P~gs~h~~~a 201 (223)
T 3o14_A 166 GIEV-LVLDGDVT--V-NDE---VLGRNAWLRLPEGEALSATA 201 (223)
T ss_dssp CEEE-EEEEEEEE--E-TTE---EECTTEEEEECTTCCEEEEE
T ss_pred cEEE-EEEEeEEE--E-CCc---eECCCeEEEeCCCCccCcEE
Confidence 4564 99999965 3 333 58999999999999888877
No 213
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=46.08 E-value=24 Score=31.55 Aligned_cols=25 Identities=8% Similarity=0.045 Sum_probs=18.8
Q ss_pred EEEcCCcEEEEcCCCEEEEEEecceEEE
Q 032303 107 MRFLAGDLIRYPKWFEADLFFNGPYQER 134 (143)
Q Consensus 107 ~e~~AGDlv~fPkG~~gtW~V~e~vrK~ 134 (143)
+++.|||++++|.|| ||..-+...-
T Consensus 368 v~l~pGEtlfIPsGW---~HaV~tleDS 392 (528)
T 3pur_A 368 VVIKEGQTLLIPAGW---IHAVLTPVDS 392 (528)
T ss_dssp EEEETTCEEEECTTC---EEEEEEEEEE
T ss_pred EEECCCCEEEecCCc---eEEEecCCCe
Confidence 789999999999998 5544444333
No 214
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=43.71 E-value=11 Score=30.74 Aligned_cols=16 Identities=6% Similarity=-0.203 Sum_probs=14.6
Q ss_pred eEEEcCCcEEEEcCCC
Q 032303 106 YMRFLAGDLIRYPKWF 121 (143)
Q Consensus 106 ~~e~~AGDlv~fPkG~ 121 (143)
++.+++||.+++|+|.
T Consensus 159 ~v~l~pGd~~~ipaGt 174 (300)
T 1zx5_A 159 TFETTPYDTFVIRPGI 174 (300)
T ss_dssp EEECCTTCEEEECTTC
T ss_pred eeECCCCCEEEcCCCC
Confidence 4789999999999997
No 215
>3anw_A GINS51, putative uncharacterized protein; SLD5 superfamily, DNA replication, replication; 2.65A {Thermococcus kodakarensis}
Probab=42.03 E-value=8.3 Score=29.53 Aligned_cols=32 Identities=22% Similarity=0.306 Sum_probs=24.4
Q ss_pred eEEEEEEeEEEEEeCCCeeeEE-EcCCcEEEEcC
Q 032303 87 QLVYIEEGEVRVVPEGSQRYMR-FLAGDLIRYPK 119 (143)
Q Consensus 87 E~~yILEG~V~vt~d~G~~~~e-~~AGDlv~fPk 119 (143)
|-..|++.-=.+...|+.. +. |.+||+|++|+
T Consensus 137 e~~~v~~d~p~i~~~d~r~-Y~Pl~~~Dvv~LP~ 169 (188)
T 3anw_A 137 EAYIIQIDLPAVLGPDMKE-YGPFMAGDMAIIPT 169 (188)
T ss_dssp EEEEECSCBCCEECTTSCE-ECCBCTTCEEEEEH
T ss_pred cceEEEeCCCceecCCcCc-ccCCCcccEEeecH
Confidence 3334566666778888887 56 99999999996
No 216
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=41.34 E-value=59 Score=26.48 Aligned_cols=37 Identities=19% Similarity=0.309 Sum_probs=25.7
Q ss_pred eEEEE-EE---e--EEEEEeCCC--eeeEEEcCCcEEEEcCCCEE
Q 032303 87 QLVYI-EE---G--EVRVVPEGS--QRYMRFLAGDLIRYPKWFEA 123 (143)
Q Consensus 87 E~~yI-LE---G--~V~vt~d~G--~~~~e~~AGDlv~fPkG~~g 123 (143)
|+.|+ +. | --++..+|| .+...++-||+|.+|+|+..
T Consensus 186 E~YYf~~~~~~gf~~q~vyt~d~~~de~~~V~~~d~VlvP~GyHp 230 (270)
T 2qjv_A 186 ETYYHRFNPPQGFCLQRVYTDDRSLDECMAVYNRDVVXVPXGYHP 230 (270)
T ss_dssp EEEEEEEESTTCEEEEEEECTTSSSEEEEEEETTCEEEESSSBCC
T ss_pred eEEEEECCCCCCEEEEEEeCCCCCCceEEEEECCCEEecCCCcCC
Confidence 88766 43 2 334444443 33589999999999999966
No 217
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=40.96 E-value=18 Score=26.00 Aligned_cols=62 Identities=16% Similarity=0.148 Sum_probs=39.6
Q ss_pred cCCCHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEeC--CCee--eEEEcCCcEEE
Q 032303 54 RQVSPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVPE--GSQR--YMRFLAGDLIR 116 (143)
Q Consensus 54 ~~ps~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~d--~G~~--~~e~~AGDlv~ 116 (143)
.+.+++.+..+-. ....-...+|..=+.-. .+.+++|++|.|++.-. +|.. ...+++||.+-
T Consensus 18 ~~l~~~~~~~l~~-~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 85 (227)
T 3dkw_A 18 EPLSPVQLQELLA-SSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFA 85 (227)
T ss_dssp SSSCHHHHHHHHT-SCEEEECCTTEEEECTTSBCCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEES
T ss_pred cCCCHHHHHHHHh-hCEEEEECCCCEEEcCCCccceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEee
Confidence 3455666655532 23445567777654432 57899999999999753 4432 24688999874
No 218
>1g31_A GP31; chaperone, CO-chaperonin, groes, in VIVO protein folding, bacteriophage T4; 2.30A {Enterobacteria phage T4} SCOP: b.35.1.1 PDB: 2cgt_O
Probab=40.57 E-value=9.6 Score=27.45 Aligned_cols=28 Identities=21% Similarity=0.008 Sum_probs=19.9
Q ss_pred EeEEEEEeCCCeeeEEEcCCcEEEEcCCC
Q 032303 93 EGEVRVVPEGSQRYMRFLAGDLIRYPKWF 121 (143)
Q Consensus 93 EG~V~vt~d~G~~~~e~~AGDlv~fPkG~ 121 (143)
+|+|.-.-.+-.+ ..++.||.|.||+|-
T Consensus 48 ~g~VvAVG~g~~~-~~vKvGD~Vl~~kg~ 75 (111)
T 1g31_A 48 LCVVHSVGPDVPE-GFCEVGDLTSLPVGQ 75 (111)
T ss_dssp EEEEEEECTTSCT-TSCCTTCEEEEEGGG
T ss_pred eEEEEEECCCCcc-ccccCCCEEEECCCc
Confidence 6777655544333 458999999999965
No 219
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=40.36 E-value=29 Score=28.17 Aligned_cols=36 Identities=14% Similarity=0.175 Sum_probs=23.1
Q ss_pred cceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCE
Q 032303 85 VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFE 122 (143)
Q Consensus 85 ~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~ 122 (143)
..=+.|+++|+++|..++.. ..+.++.++++..|-.
T Consensus 190 ~~~~lyv~~G~v~v~g~~~~--~~~~~~~~~~l~~gd~ 225 (290)
T 1j1l_A 190 WTSFIYTISGDVYIGPDDAQ--QKIEPHHTAVLGEGDS 225 (290)
T ss_dssp CEEEEEEEESCEEESCTTSC--EEECTTEEEEECSCSE
T ss_pred CEEEEEEEeCeEEECCcccc--eeccCceEEEecCCCE
Confidence 35689999999999543221 2456666666666544
No 220
>2k1g_A Lipoprotein SPR; solution structure, bacterial lipoprotein, cysteine PEPT NPLC/P60 family, construct optimized, membrane, palmitate; NMR {Escherichia coli}
Probab=39.87 E-value=5.9 Score=28.94 Aligned_cols=14 Identities=21% Similarity=0.332 Sum_probs=11.4
Q ss_pred EEcCCcEEEEcCCC
Q 032303 108 RFLAGDLIRYPKWF 121 (143)
Q Consensus 108 e~~AGDlv~fPkG~ 121 (143)
+++|||+|||..|-
T Consensus 67 ~l~pGDLvFf~~~~ 80 (135)
T 2k1g_A 67 NLRTGDLVLFRAGS 80 (135)
T ss_dssp GCCTTEEEEEEETT
T ss_pred HccCCcEEEECCCC
Confidence 47899999997654
No 221
>3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4, CAMP, SP-camps, GEF, gunanine nucleotide exchange factor, G-protein, GTP-binding, nucleotide-binding; HET: SP1; 2.20A {Mus musculus}
Probab=39.25 E-value=44 Score=30.04 Aligned_cols=62 Identities=18% Similarity=0.066 Sum_probs=40.2
Q ss_pred cCCCHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEeCCCeeeEEEcCCcEE
Q 032303 54 RQVSPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVPEGSQRYMRFLAGDLI 115 (143)
Q Consensus 54 ~~ps~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv 115 (143)
...+++.+.++-...--.=...+|.+=+.-+ .+.+.+|++|.|++.-.+......+++||.|
T Consensus 41 ~~Ls~~~l~~L~~~~~~~~~~~kGe~I~~eGd~~~~lyiIlsG~V~v~~~g~~il~~l~~Gd~f 104 (694)
T 3cf6_E 41 SHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDF 104 (694)
T ss_dssp TTSCHHHHHHHHTTCEEEEECSTTCEEECTTSBCCEEEEEEESEEEEEETTTEEEEEEETTCEE
T ss_pred ccCCHHHHHHHHHhcceEEEECCCCEEECCCCcCCeEEEEEEEEEEEEEeCCEEEEEeCCCCEe
Confidence 3456666666532211123557777654432 5788999999999987654333688999966
No 222
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=36.84 E-value=20 Score=30.43 Aligned_cols=17 Identities=6% Similarity=-0.023 Sum_probs=14.8
Q ss_pred eEEEcCCcEEEEcCCCE
Q 032303 106 YMRFLAGDLIRYPKWFE 122 (143)
Q Consensus 106 ~~e~~AGDlv~fPkG~~ 122 (143)
++.++|||.+++|+|.-
T Consensus 241 ~v~l~pGd~~fipAG~~ 257 (394)
T 2wfp_A 241 VVKLNPGEAMFLFAETP 257 (394)
T ss_dssp EEEECTTCEEEECTTCC
T ss_pred EEECCCCCEEEcCCCCc
Confidence 37899999999999973
No 223
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=36.68 E-value=56 Score=26.91 Aligned_cols=43 Identities=9% Similarity=-0.015 Sum_probs=28.2
Q ss_pred eecCceeeeeec--cceEEEEEEeEEEEEe-CCCee--eEEEcCCcEE
Q 032303 73 KTGKCKLPWDWQ--VDQLVYIEEGEVRVVP-EGSQR--YMRFLAGDLI 115 (143)
Q Consensus 73 ec~pg~f~~~y~--~dE~~yILEG~V~vt~-d~G~~--~~e~~AGDlv 115 (143)
...+|..=+.-. .+.++.|++|.|.|.. .+|.. ...+.+||.|
T Consensus 172 ~~~~Ge~I~~qGd~~d~~YiI~sG~v~v~~~~~G~~~~v~~l~~G~~f 219 (416)
T 3tnp_B 172 LVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSF 219 (416)
T ss_dssp EECTTCEEECTTSCCCEEEEEEECEEEEEEECSSCEEEEEEEESCCEE
T ss_pred EeCCCCEEEeCCCCCceEEEEEeeEEEEEEecCCCEEEEEEecCCCEE
Confidence 335565543322 4789999999999874 34432 3468899966
No 224
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=36.32 E-value=47 Score=26.84 Aligned_cols=31 Identities=23% Similarity=0.302 Sum_probs=23.6
Q ss_pred cceEEEEEEeEEEEEeCC--C-e--eeEEEcCCcEE
Q 032303 85 VDQLVYIEEGEVRVVPEG--S-Q--RYMRFLAGDLI 115 (143)
Q Consensus 85 ~dE~~yILEG~V~vt~d~--G-~--~~~e~~AGDlv 115 (143)
.+.+..|++|+|++.-.+ | + ....+++||.|
T Consensus 289 ~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~f 324 (381)
T 4din_B 289 GDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYF 324 (381)
T ss_dssp CCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEE
T ss_pred CCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEe
Confidence 578999999999998642 2 2 23578999987
No 225
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=36.16 E-value=1.2e+02 Score=21.83 Aligned_cols=45 Identities=13% Similarity=0.129 Sum_probs=31.8
Q ss_pred eEEEEEEeEEEEE--eCCCe----eeEEEcCCcEEEEcCCCEEEEEEecce
Q 032303 87 QLVYIEEGEVRVV--PEGSQ----RYMRFLAGDLIRYPKWFEADLFFNGPY 131 (143)
Q Consensus 87 E~~yILEG~V~vt--~d~G~----~~~e~~AGDlv~fPkG~~gtW~V~e~v 131 (143)
....||+|++++. .++|+ ..+-+.||+..++|+...=.=+...++
T Consensus 40 gkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~sdD~ 90 (119)
T 3dl3_A 40 GQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELSDDA 90 (119)
T ss_dssp EEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEECTTC
T ss_pred EEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEECCCe
Confidence 4678999999999 44442 336789999999999765444444443
No 226
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=35.96 E-value=56 Score=26.93 Aligned_cols=44 Identities=16% Similarity=0.196 Sum_probs=28.5
Q ss_pred eeecCceeeeee--ccceEEEEEEeEEEEEeCC--------Ce--eeEEEcCCcEE
Q 032303 72 WKTGKCKLPWDW--QVDQLVYIEEGEVRVVPEG--------SQ--RYMRFLAGDLI 115 (143)
Q Consensus 72 Wec~pg~f~~~y--~~dE~~yILEG~V~vt~d~--------G~--~~~e~~AGDlv 115 (143)
-...+|..-+.- ..+.+..|++|+|++.-.+ |. ....+++||.|
T Consensus 293 ~~~~~Ge~I~~eGd~~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l~~G~~f 348 (416)
T 3tnp_B 293 KVYNDGEQIIAQGDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRGQYF 348 (416)
T ss_dssp EEECTTCEEECTTSCCCEEEEEEEEEEEEECC------------CEEEEECTTCEE
T ss_pred EEECCCCEEEeCCCcCCEEEEEEeCEEEEEEecCCcccccCCceeEEEEeCCCCEe
Confidence 345566654432 2578999999999998543 32 23578899976
No 227
>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A
Probab=35.58 E-value=8.5 Score=27.16 Aligned_cols=23 Identities=26% Similarity=0.559 Sum_probs=16.5
Q ss_pred CCCee-eEEEcCCcEEEEcCCCEEE
Q 032303 101 EGSQR-YMRFLAGDLIRYPKWFEAD 124 (143)
Q Consensus 101 d~G~~-~~e~~AGDlv~fPkG~~gt 124 (143)
++|+. ...++.||.|.|++ +.|+
T Consensus 55 ~~G~~~p~~VkvGD~Vlf~k-y~Gt 78 (100)
T 1we3_O 55 ENGQRVPLEVKEGDIVVFAK-YGGT 78 (100)
T ss_dssp TTSCEECCSCCTTCEEEECT-TCSE
T ss_pred CCCCEEeeecCCCCEEEECC-CCCe
Confidence 45553 24689999999999 5555
No 228
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=35.25 E-value=43 Score=26.52 Aligned_cols=41 Identities=29% Similarity=0.379 Sum_probs=27.6
Q ss_pred eEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEecceE--EEEEE
Q 032303 94 GEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNGPYQ--ERYSF 137 (143)
Q Consensus 94 G~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e~vr--K~Y~~ 137 (143)
|+-.+.+.++...+.-.+|++++||.++ ++=..||. .+|++
T Consensus 147 Getvf~~~~~~~~V~P~~G~~v~F~s~~---lH~v~pV~~G~R~~~ 189 (243)
T 3dkq_A 147 GELVIQDTYGQQSIKLSAGSLVLYPSSS---LHQVTPVLSGERTAA 189 (243)
T ss_dssp CCEEEEETTEEEEECCCTTCEEEEETTS---EEEECCEEEECEEEE
T ss_pred ceEEEeeCCCcEEEecCCCEEEEECCCC---eEcCccccccCEEEE
Confidence 5666665554444677899999999974 56667765 34553
No 229
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=35.10 E-value=47 Score=25.69 Aligned_cols=56 Identities=14% Similarity=0.060 Sum_probs=40.4
Q ss_pred cCceee-eeec-cceEEEEEE-eEE-EEEeCC------Ce-eeEEEcCCcEEEEcCCCEEEEEEecc
Q 032303 75 GKCKLP-WDWQ-VDQLVYIEE-GEV-RVVPEG------SQ-RYMRFLAGDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 75 ~pg~f~-~~y~-~dE~~yILE-G~V-~vt~d~------G~-~~~e~~AGDlv~fPkG~~gtW~V~e~ 130 (143)
.+|..+ |||+ ...++.++. |++ .|..|. |. ..+++.++-.+.+|+|+--...+.+.
T Consensus 68 ~~GvlRGlH~h~q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd 134 (197)
T 1nxm_A 68 RKNVLRGLHAEPWDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSD 134 (197)
T ss_dssp ETTBEEEEEECSSCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSS
T ss_pred CCCCcceeeecccceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccC
Confidence 456654 5655 689999999 995 444444 32 24788899999999999877777665
No 230
>3nx6_A 10KDA chaperonin; bacterial blight, XOO4289, groes, xanthomonas oryzae PV. ORY KACC10331, chaperone; 1.97A {Xanthomonas oryzae PV} SCOP: b.35.1.0
Probab=31.41 E-value=24 Score=24.54 Aligned_cols=32 Identities=19% Similarity=0.296 Sum_probs=20.7
Q ss_pred EEeEEEEEeC-----CCee-eEEEcCCcEEEEcCCCEEE
Q 032303 92 EEGEVRVVPE-----GSQR-YMRFLAGDLIRYPKWFEAD 124 (143)
Q Consensus 92 LEG~V~vt~d-----~G~~-~~e~~AGDlv~fPkG~~gt 124 (143)
.+|+|.-.-. +|+. ...++.||.|.|++ +.|+
T Consensus 36 ~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vl~~k-y~Gt 73 (95)
T 3nx6_A 36 TKGEVVAIGAGKPLDNGSLHAPVVKVGDKVIYGQ-YAGS 73 (95)
T ss_dssp EEEEEEEECSCEECTTSCEECCSCCTTCEEEECT-TCSE
T ss_pred cccEEEEECCCeECCCCCEEccccCCCCEEEECC-cCCe
Confidence 3555554433 3432 24789999999998 5565
No 231
>2hbp_A Cytoskeleton assembly control protein SLA1; SHD1, NPFX(1,2)D, endocytosis, protein binding; NMR {Saccharomyces cerevisiae}
Probab=31.35 E-value=89 Score=20.65 Aligned_cols=36 Identities=8% Similarity=0.308 Sum_probs=30.1
Q ss_pred eeeeecCceeeeeeccceEEEEEEeEEEEEeCCCeeeEEE
Q 032303 70 SMWKTGKCKLPWDWQVDQLVYIEEGEVRVVPEGSQRYMRF 109 (143)
Q Consensus 70 giWec~pg~f~~~y~~dE~~yILEG~V~vt~d~G~~~~e~ 109 (143)
-+|...-|+|..+ .|+.-+..|++.|.-.+|.. +.+
T Consensus 6 RtWtDrtG~F~Ve---A~flg~~dgki~LhK~nGv~-I~V 41 (68)
T 2hbp_A 6 RLWVDRSGTFKVD---AEFIGCAKGKIHLHKANGVK-IAV 41 (68)
T ss_dssp EEEEBSSSCCEEE---EEEEEEETTEEEEECTTSCE-EEE
T ss_pred cEEEcCCCCeEEE---EEEEEEeCCEEEEEecCCcE-EEe
Confidence 4799999999865 68899999999999999976 443
No 232
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=31.11 E-value=1.7e+02 Score=22.06 Aligned_cols=55 Identities=24% Similarity=0.174 Sum_probs=38.0
Q ss_pred Cceee-eeec----cceEEEEEEeEEE-EEeCCC-------e-eeEEEcC--CcEEEEcCCCEEEEEEecc
Q 032303 76 KCKLP-WDWQ----VDQLVYIEEGEVR-VVPEGS-------Q-RYMRFLA--GDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 76 pg~f~-~~y~----~dE~~yILEG~V~-vt~d~G-------~-~~~e~~A--GDlv~fPkG~~gtW~V~e~ 130 (143)
+|..+ +||+ ...++.+++|++. |..|.. + ..+++.+ +-.+.+|+|+--...+.+.
T Consensus 58 ~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd 128 (184)
T 2ixk_A 58 RGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSE 128 (184)
T ss_dssp TTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSS
T ss_pred CCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCC
Confidence 56653 5555 7899999999973 333332 2 2356666 5889999999887777665
No 233
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=30.70 E-value=1.5e+02 Score=22.96 Aligned_cols=56 Identities=9% Similarity=0.051 Sum_probs=38.8
Q ss_pred cCceee-eeec-----cceEEEEEEeEE-EEEeCCC--------eeeEEEcC--CcEEEEcCCCEEEEEEecc
Q 032303 75 GKCKLP-WDWQ-----VDQLVYIEEGEV-RVVPEGS--------QRYMRFLA--GDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 75 ~pg~f~-~~y~-----~dE~~yILEG~V-~vt~d~G--------~~~~e~~A--GDlv~fPkG~~gtW~V~e~ 130 (143)
.+|..+ +||+ ...++.+++|++ .|..|.. -..+++.+ +-.+.+|+|+-=-..+.+.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd 127 (205)
T 1oi6_A 55 KRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALED 127 (205)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECST
T ss_pred CCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccC
Confidence 356653 5554 589999999997 3444442 12367776 4789999999887777665
No 234
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=30.61 E-value=28 Score=30.13 Aligned_cols=17 Identities=24% Similarity=0.159 Sum_probs=14.2
Q ss_pred EEEcCCcEEEEcCCCEE
Q 032303 107 MRFLAGDLIRYPKWFEA 123 (143)
Q Consensus 107 ~e~~AGDlv~fPkG~~g 123 (143)
++=.+||+||+|+|+.=
T Consensus 295 ~~Q~~GeavfiPaG~~H 311 (392)
T 2ypd_A 295 LIQFLGDAIVLPAGALH 311 (392)
T ss_dssp EEEETTCEEEECTTCEE
T ss_pred EEEcCCCEEEecCCCHH
Confidence 45589999999999853
No 235
>2e9x_D GINS complex subunit 4; eukaryotic DNA replication; HET: DNA; 2.30A {Homo sapiens} SCOP: a.278.1.4 d.344.1.3 PDB: 2q9q_B* 2eho_A*
Probab=30.58 E-value=45 Score=25.90 Aligned_cols=24 Identities=13% Similarity=0.127 Sum_probs=17.3
Q ss_pred eEEEEEeCCC----eeeEEEcCCcEEEEc
Q 032303 94 GEVRVVPEGS----QRYMRFLAGDLIRYP 118 (143)
Q Consensus 94 G~V~vt~d~G----~~~~e~~AGDlv~fP 118 (143)
|.+.+.+.+| +. +.+.+|+..++|
T Consensus 180 g~v~~~~~~g~~~~~~-i~L~kgs~~~vr 207 (223)
T 2e9x_D 180 ENILVEPDTDEQRDYV-IDLEKGSQHLIR 207 (223)
T ss_dssp EEEEECCSSCGGGCEE-EEECTTCEEEEE
T ss_pred CeEEeCCCCCCcccee-EEEccCCEEEEE
Confidence 6666544335 34 899999999987
No 236
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=30.53 E-value=80 Score=21.43 Aligned_cols=37 Identities=5% Similarity=0.042 Sum_probs=25.9
Q ss_pred eccceEEEEEEeEEEEEeCCCeeeEEEcCCcEEE--EcCCCE
Q 032303 83 WQVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIR--YPKWFE 122 (143)
Q Consensus 83 y~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~--fPkG~~ 122 (143)
|...|++-+. +..|+++|.-....+-||+.+ --.|+-
T Consensus 25 yNyae~~~~~---~~~TD~~G~~s~~~G~Gd~~v~A~k~G~~ 63 (82)
T 3e8v_A 25 YNYAEFYTVA---TKHTDRSGHASLTAGKGDMLVWASKDGRF 63 (82)
T ss_dssp EETTEEEEEE---EEECCTTSEEEEECCSEEEEEEEEETTEE
T ss_pred EEchheeEEE---EEEECCCceEEEEEcCCceEEEeccCCEE
Confidence 4457887764 478888898666777799988 344443
No 237
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=29.68 E-value=69 Score=29.38 Aligned_cols=64 Identities=9% Similarity=0.008 Sum_probs=38.2
Q ss_pred EEecCCCHHHHhhcCCCceeeeeecCceeeeeec--cceEEEEEEeEEEEEeC------CCeeeEEEcCCcEE
Q 032303 51 RVERQVSPERLKELDVSRWSMWKTGKCKLPWDWQ--VDQLVYIEEGEVRVVPE------GSQRYMRFLAGDLI 115 (143)
Q Consensus 51 ~ve~~ps~~rl~~lGv~~wgiWec~pg~f~~~y~--~dE~~yILEG~V~vt~d------~G~~~~e~~AGDlv 115 (143)
.+=++..+..|.++-- ..-.=...+|..=+... .+.+..|++|+|.|.-. ++....++++||.|
T Consensus 48 ~~f~~l~~~~l~~l~~-~m~ye~~~~Ge~IfrqGd~gd~fYIIlsGsV~V~i~~~~~~~~~~~v~~l~~G~sF 119 (999)
T 4f7z_A 48 KAFEKFHPNLLRQICL-CGYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAF 119 (999)
T ss_dssp TTTTTCCHHHHHHHHH-HCEEEEECTTCEEECTTSCCCEEEEEEESEEEEEECSSSCTTSCEEEEEEETTCEE
T ss_pred HhhhcCCHHHHHHHHh-heEEEEECCCCEEEcCCCcCCEEEEEEeeEEEEEEecCCCCCCceeEEEecCCcch
Confidence 3334555666655531 11122446666544432 57888899999999642 23334689999976
No 238
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=29.46 E-value=1.1e+02 Score=24.81 Aligned_cols=42 Identities=19% Similarity=0.324 Sum_probs=28.3
Q ss_pred ceEEEEEEeEEEEEeCCCeeeEEEcCCcEEEEcCCCEEEEEEec
Q 032303 86 DQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKWFEADLFFNG 129 (143)
Q Consensus 86 dE~~yILEG~V~vt~d~G~~~~e~~AGDlv~fPkG~~gtW~V~e 129 (143)
..+...+.|.....+.++. +.+.||..+.+|+|..=.|...+
T Consensus 155 ~~v~V~~DG~~~~~~aG~~--i~L~PGESiTl~Pg~~H~F~ae~ 196 (246)
T 3kmh_A 155 SDITVVIDGCRQKHTAGSQ--LRLSPGESICLPPGLYHSFWAEA 196 (246)
T ss_dssp SCEEEEETTEEEEECTTCE--EEECTTCEEEECTTEEEEEEECT
T ss_pred CCeEEecCCeEEEeCCCCE--EEECCCCeEecCCCCEEEEEecC
Confidence 3556666666655555444 68888888888888766655544
No 239
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=29.43 E-value=1.4e+02 Score=22.89 Aligned_cols=55 Identities=11% Similarity=0.162 Sum_probs=38.9
Q ss_pred Cceee-eeec-----cceEEEEEEeEE-EEEeCCC--------eeeEEEcC--CcEEEEcCCCEEEEEEecc
Q 032303 76 KCKLP-WDWQ-----VDQLVYIEEGEV-RVVPEGS--------QRYMRFLA--GDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 76 pg~f~-~~y~-----~dE~~yILEG~V-~vt~d~G--------~~~~e~~A--GDlv~fPkG~~gtW~V~e~ 130 (143)
+|..+ ++|+ ...++.+++|++ .|..|.. -..+++.+ +-.+.+|+|+-=...+.+.
T Consensus 74 ~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd 145 (196)
T 1wlt_A 74 KGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALED 145 (196)
T ss_dssp TTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSS
T ss_pred CCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCC
Confidence 56654 5554 479999999999 4444432 12367776 6899999999888777766
No 240
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=28.75 E-value=32 Score=29.68 Aligned_cols=16 Identities=6% Similarity=-0.085 Sum_probs=14.4
Q ss_pred eEEEcCCcEEEEcCCC
Q 032303 106 YMRFLAGDLIRYPKWF 121 (143)
Q Consensus 106 ~~e~~AGDlv~fPkG~ 121 (143)
++.++|||.+++|+|.
T Consensus 267 ~v~L~pGea~flpAg~ 282 (440)
T 1pmi_A 267 HVGLNKGEAMFLQAKD 282 (440)
T ss_dssp EEEECTTCEEEECTTC
T ss_pred eEecCCCCEEecCCCC
Confidence 3789999999999996
No 241
>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A
Probab=28.41 E-value=13 Score=26.18 Aligned_cols=17 Identities=24% Similarity=0.556 Sum_probs=13.5
Q ss_pred EEEcCCcEEEEcCCCEEE
Q 032303 107 MRFLAGDLIRYPKWFEAD 124 (143)
Q Consensus 107 ~e~~AGDlv~fPkG~~gt 124 (143)
..++.||.|.|++ |.|+
T Consensus 60 ~~VkvGD~Vlf~k-y~Gt 76 (99)
T 1p3h_A 60 LDVAEGDTVIYSK-YGGT 76 (99)
T ss_dssp CSCCTTCEEEEEC-TTCE
T ss_pred cccCCCCEEEECC-cCCe
Confidence 4689999999999 4443
No 242
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=27.47 E-value=1.5e+02 Score=22.37 Aligned_cols=56 Identities=23% Similarity=0.185 Sum_probs=37.8
Q ss_pred Cceee-eeec-----cceEEEEEEeEEE-EEeCC--C------eeeEEEcC--CcEEEEcCCCEEEEEEecce
Q 032303 76 KCKLP-WDWQ-----VDQLVYIEEGEVR-VVPEG--S------QRYMRFLA--GDLIRYPKWFEADLFFNGPY 131 (143)
Q Consensus 76 pg~f~-~~y~-----~dE~~yILEG~V~-vt~d~--G------~~~~e~~A--GDlv~fPkG~~gtW~V~e~v 131 (143)
+|..+ +||+ ...++.+++|++. |..|. + -..+++.+ +-.+.+|+|+-=...+.+.-
T Consensus 56 ~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (183)
T 1dzr_A 56 KNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY 128 (183)
T ss_dssp TTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred CCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 56653 4554 4899999999973 33332 2 12356666 58899999998777776653
No 243
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=27.31 E-value=2e+02 Score=21.67 Aligned_cols=55 Identities=16% Similarity=0.169 Sum_probs=37.2
Q ss_pred Cceee-eee----ccceEEEEEEeEEE-EEeCCC-------e-eeEEEcC--CcEEEEcCCCEEEEEEecc
Q 032303 76 KCKLP-WDW----QVDQLVYIEEGEVR-VVPEGS-------Q-RYMRFLA--GDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 76 pg~f~-~~y----~~dE~~yILEG~V~-vt~d~G-------~-~~~e~~A--GDlv~fPkG~~gtW~V~e~ 130 (143)
+|..+ +|| ...+++.+++|++. |..|.. + ..+++.+ +-.+.+|+|+--...+.+.
T Consensus 57 ~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd 127 (185)
T 1ep0_A 57 RGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSD 127 (185)
T ss_dssp TTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSS
T ss_pred CCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCC
Confidence 56553 444 46899999999973 333322 2 2356665 5889999999877777665
No 244
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=26.30 E-value=2.1e+02 Score=22.45 Aligned_cols=56 Identities=13% Similarity=0.005 Sum_probs=39.2
Q ss_pred cCceee-eeec-----cceEEEEEEeEE-EEEeCCC--------eeeEEEcC--CcEEEEcCCCEEEEEEecc
Q 032303 75 GKCKLP-WDWQ-----VDQLVYIEEGEV-RVVPEGS--------QRYMRFLA--GDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 75 ~pg~f~-~~y~-----~dE~~yILEG~V-~vt~d~G--------~~~~e~~A--GDlv~fPkG~~gtW~V~e~ 130 (143)
.+|..+ ++|+ ...++.++.|++ .|..|.. -..+++.+ +-.+.+|+|+-=...+.+.
T Consensus 74 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd 146 (225)
T 1upi_A 74 SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQD 146 (225)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSS
T ss_pred CCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCC
Confidence 367654 5555 579999999997 4444442 12356766 4789999999888877765
No 245
>2jyx_A Lipoprotein SPR; solution structure, construct optimized, membrane, palmitate, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli K12} PDB: 2k1g_A
Probab=26.11 E-value=17 Score=26.04 Aligned_cols=13 Identities=23% Similarity=0.429 Sum_probs=11.0
Q ss_pred EEcCCcEEEEcCC
Q 032303 108 RFLAGDLIRYPKW 120 (143)
Q Consensus 108 e~~AGDlv~fPkG 120 (143)
+++|||+|+|..+
T Consensus 67 ~l~pGDLvff~~~ 79 (136)
T 2jyx_A 67 NLRTGDLVLFRAG 79 (136)
T ss_dssp TCCTTEEEEEECS
T ss_pred hCCCCCEEEECCC
Confidence 4689999999865
No 246
>3tbm_A Putative uncharacterized protein; iron-sulfur, CDGSH, metal binding protein; HET: 2PE TLA; 1.80A {Ralstonia solanacearum}
Probab=25.63 E-value=40 Score=22.25 Aligned_cols=16 Identities=31% Similarity=0.686 Sum_probs=13.2
Q ss_pred EEEEeEEEEEeCCCee
Q 032303 90 YIEEGEVRVVPEGSQR 105 (143)
Q Consensus 90 yILEG~V~vt~d~G~~ 105 (143)
|+++|.+.|..++|+.
T Consensus 18 l~V~G~v~i~~~dG~~ 33 (69)
T 3tbm_A 18 YHIKGSFRIVTQGGRE 33 (69)
T ss_dssp EEEESSCEEEESSCCE
T ss_pred EEEECCCeEECCCCCE
Confidence 6788888888888876
No 247
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=24.29 E-value=37 Score=24.98 Aligned_cols=72 Identities=18% Similarity=0.178 Sum_probs=40.2
Q ss_pred eeeeeccccc-ceeceEEecCC-CHHHHhhcCCCceeeeeecCceeee-eeccceEEEEEEeEEEEEeCCCeeeEEEcCC
Q 032303 36 RAMRVEKPLE-ELYNVRVERQV-SPERLKELDVSRWSMWKTGKCKLPW-DWQVDQLVYIEEGEVRVVPEGSQRYMRFLAG 112 (143)
Q Consensus 36 ~~~~~~~~~~-e~~~I~ve~~p-s~~rl~~lGv~~wgiWec~pg~f~~-~y~~dE~~yILEG~V~vt~d~G~~~~e~~AG 112 (143)
-+|+.|.-.. .....++..|| +-+.+. +.=|=+.+. +|. +|.+.-+.-. +..++... ..+.+|
T Consensus 11 ~~~~~~~~~~~~~v~a~L~Dnp~Ta~~~~----------~~LPl~~~~~~~g-~E~y~~~p~~--l~~~e~~~-~~~~~G 76 (136)
T 1zx8_A 11 HHMRVELLFESGKCVIDLNEEYEVVKLLK----------EKIPFESVVNTWG-EEIYFSTPVN--VQKMENPR-EVVEIG 76 (136)
T ss_dssp CEEEEEEECSSCEEEEEEETTSHHHHHHH----------HHCSEEEECEESS-SEEEEECSCC--CCCCSSEE-SSBCTT
T ss_pred ceeEEEEeeCCcEEEEEEcCCHHHHHHHH----------HHCCcEEEHHHhC-CcEEEECCcc--CCCCCCCC-ccCCCC
Confidence 3577654332 33556677776 433332 222222222 354 7877766633 34333334 568999
Q ss_pred cEEEEcCCC
Q 032303 113 DLIRYPKWF 121 (143)
Q Consensus 113 Dlv~fPkG~ 121 (143)
|+.++|.|-
T Consensus 77 DIaYw~pgg 85 (136)
T 1zx8_A 77 DVGYWPPGK 85 (136)
T ss_dssp EEEEEGGGT
T ss_pred cEEEeCCCC
Confidence 999999865
No 248
>3jxo_A TRKA-N domain protein; TRKA K+ channel component, structural genomics, PSI-2-2, Pro structure initiative, joint center for structural genomics; 1.55A {Thermotoga SP}
Probab=23.77 E-value=57 Score=20.46 Aligned_cols=27 Identities=33% Similarity=0.493 Sum_probs=17.1
Q ss_pred EEEEEEeEEEEEeCCCeeeEEEcCCcEEEE
Q 032303 88 LVYIEEGEVRVVPEGSQRYMRFLAGDLIRY 117 (143)
Q Consensus 88 ~~yILEG~V~vt~d~G~~~~e~~AGDlv~f 117 (143)
++-|..|.-.+.| .++ ..+.+||.+++
T Consensus 43 i~~I~R~~~~~~p-~~~--~~l~~GD~l~v 69 (86)
T 3jxo_A 43 IAAIVRGGVLVVP-RGD--TEILSGDKLYV 69 (86)
T ss_dssp EEEEEETTEEECC-CTT--CBCCTTCEEEE
T ss_pred EEEEEECCEEECC-CCC--CEECCCCEEEE
Confidence 4445555444555 444 36999999886
No 249
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=22.67 E-value=2.7e+02 Score=21.51 Aligned_cols=56 Identities=18% Similarity=0.175 Sum_probs=39.3
Q ss_pred cCceee-eeec-----cceEEEEEEeEEE---EEeCCCe------eeEEEcC--CcEEEEcCCCEEEEEEecc
Q 032303 75 GKCKLP-WDWQ-----VDQLVYIEEGEVR---VVPEGSQ------RYMRFLA--GDLIRYPKWFEADLFFNGP 130 (143)
Q Consensus 75 ~pg~f~-~~y~-----~dE~~yILEG~V~---vt~d~G~------~~~e~~A--GDlv~fPkG~~gtW~V~e~ 130 (143)
.+|..+ ++|+ ..+++.+++|++. |-.-.|. ..+++.+ +-.+.+|+|+---..+.+.
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd 150 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVP 150 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSS
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCC
Confidence 467764 5554 5899999999973 2222232 2267876 7899999999888777665
No 250
>1iwl_A P20, outer-membrane lipoproteins carrier protein; unclosed beta barrel, protein transport; 1.65A {Escherichia coli} SCOP: b.125.1.1 PDB: 1ua8_A 3ksn_A 2zpd_A 2zpc_A
Probab=22.24 E-value=1.2e+02 Score=21.39 Aligned_cols=35 Identities=11% Similarity=0.331 Sum_probs=24.4
Q ss_pred ceeeeeecCceeeeeec-cceEEEEEEeE-EEEEeCC
Q 032303 68 RWSMWKTGKCKLPWDWQ-VDQLVYIEEGE-VRVVPEG 102 (143)
Q Consensus 68 ~wgiWec~pg~f~~~y~-~dE~~yILEG~-V~vt~d~ 102 (143)
+--+|=.-|++|+|+|. ..+...|..|+ +.+.+.+
T Consensus 36 ~G~~~~~rP~~~r~~~~~P~~~~iv~dG~~v~~y~~~ 72 (182)
T 1iwl_A 36 QGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPF 72 (182)
T ss_dssp EEEEEEETTTEEEEEECSSSCEEEEEESSEEEEEEGG
T ss_pred EEEEEEeCCCeEEEEECCCCceEEEECCCEEEEEcCC
Confidence 34478888999999997 46677777875 3444333
No 251
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*
Probab=21.96 E-value=19 Score=28.75 Aligned_cols=40 Identities=15% Similarity=0.244 Sum_probs=0.0
Q ss_pred eecCceeeeee--ccceEEEEEEeEEEEEeCCCeeeEEEcCCcEE
Q 032303 73 KTGKCKLPWDW--QVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLI 115 (143)
Q Consensus 73 ec~pg~f~~~y--~~dE~~yILEG~V~vt~d~G~~~~e~~AGDlv 115 (143)
...||..=..- ..++++.|++|+|++...+ . ..+++||.+
T Consensus 255 ~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~--~-~~l~~G~~f 296 (355)
T 3beh_A 255 TVPAGAVICRIGEPGDRMFFVVEGSVSVATPN--P-VELGPGAFF 296 (355)
T ss_dssp ---------------------------------------------
T ss_pred EECCCCEEEeCCCcCceEEEEEeeEEEEEECC--e-eEECCCCEE
Confidence 34555543322 2578999999999998776 3 578999976
No 252
>1itw_A Isocitrate dehydrogenase; greece KEY motif, oxidoreductase; HET: ICT; 1.95A {Azotobacter vinelandii} SCOP: c.77.1.2 PDB: 1j1w_A*
Probab=21.10 E-value=85 Score=29.05 Aligned_cols=25 Identities=36% Similarity=0.461 Sum_probs=20.5
Q ss_pred EeEEEEEeCCCee--eEEEcCCcEEEE
Q 032303 93 EGEVRVVPEGSQR--YMRFLAGDLIRY 117 (143)
Q Consensus 93 EG~V~vt~d~G~~--~~e~~AGDlv~f 117 (143)
.|.|+|.+++|+. .+.+.+||++..
T Consensus 432 ~G~v~vvd~~G~vl~eh~Ve~GDIwRm 458 (741)
T 1itw_A 432 DGVVRVTDESGKLLLEQSVEAGDIWRM 458 (741)
T ss_dssp SEEEEEEETTCCEEEEEEECTTCEEEE
T ss_pred CceEEEEeCCCCEEEEccccCCcchhh
Confidence 6999999888873 278899999875
No 253
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=20.92 E-value=3e+02 Score=21.39 Aligned_cols=39 Identities=18% Similarity=0.190 Sum_probs=24.5
Q ss_pred eccceEEEEEEe---EEEEEeCCCeeeEEEcC----Cc--EEEEcCCC
Q 032303 83 WQVDQLVYIEEG---EVRVVPEGSQRYMRFLA----GD--LIRYPKWF 121 (143)
Q Consensus 83 y~~dE~~yILEG---~V~vt~d~G~~~~e~~A----GD--lv~fPkG~ 121 (143)
.+.||+-|...| .+.|.+++.-..+.+++ |. -+++|+|.
T Consensus 98 v~sdEiW~~h~G~p~~~li~~dg~~~~~~LG~dl~~Ge~pQ~vVPaG~ 145 (203)
T 1xe7_A 98 NINRIIHILQRGKGQYVLVYPDGQVKSFKVGFDYKNGEVSQWVVPGGV 145 (203)
T ss_dssp ESSCEEEEEEEECEEEEEECTTSCEEEEEESSCGGGTCBSEEEECTTC
T ss_pred eCCCEEEEEEcCCccEEEEcCCCCEEEEEeCCCcccCcccEEEEcCCE
Confidence 368999999999 43334443322245554 32 48999984
No 254
>2b0t_A NADP isocitrate dehydrogenase; monomeric, IDH, oxidoreductase; 1.75A {Corynebacterium glutamicum} PDB: 3mbc_A*
Probab=20.66 E-value=86 Score=29.01 Aligned_cols=25 Identities=28% Similarity=0.314 Sum_probs=20.5
Q ss_pred EeEEEEEeCCCee--eEEEcCCcEEEE
Q 032303 93 EGEVRVVPEGSQR--YMRFLAGDLIRY 117 (143)
Q Consensus 93 EG~V~vt~d~G~~--~~e~~AGDlv~f 117 (143)
.|.|+|.+++|+. .+.+.+||++..
T Consensus 428 ~G~v~vvd~~G~vl~eh~Ve~GDIwRm 454 (738)
T 2b0t_A 428 DGVVQVVSSNGDVLIEHDVEANDIWRA 454 (738)
T ss_dssp SEEEEEECTTSCEEEEEEECTTCEEEE
T ss_pred CceEEEEeCCCCEEEeccccCCcchhh
Confidence 6999999888873 278899999875
No 255
>2w7q_A Outer-membrane lipoprotein carrier protein; periplasmic chaperone, lipoprotein transport, transport, CHA protein transport; 1.88A {Pseudomonas aeruginosa}
Probab=20.10 E-value=2.5e+02 Score=20.27 Aligned_cols=38 Identities=13% Similarity=0.183 Sum_probs=25.9
Q ss_pred ceeeeeecCceeeeeec-cceEEEEEEeE-EEEEeCCCee
Q 032303 68 RWSMWKTGKCKLPWDWQ-VDQLVYIEEGE-VRVVPEGSQR 105 (143)
Q Consensus 68 ~wgiWec~pg~f~~~y~-~dE~~yILEG~-V~vt~d~G~~ 105 (143)
+--.|=.-|++|+|+|. ..+...|..|+ +.+.+.+.++
T Consensus 56 ~G~~~~~rP~k~rw~~~~P~~~~iv~dG~~v~~yd~~~~q 95 (204)
T 2w7q_A 56 AGQLSLKRPGLFRWHTDAPNEQLLISNGEKVWLYDPDLEQ 95 (204)
T ss_dssp EEEEEEETTTEEEEEECSSSCEEEEEETTEEEEEETTTTE
T ss_pred EEEEEEeCCCEEEEEecCCceEEEEECCCEEEEEcCCcCE
Confidence 33468888999999997 46777777874 4444444433
Done!