Query 032304
Match_columns 143
No_of_seqs 137 out of 1102
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 20:06:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032304.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032304hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpr_A Ubiquitin-conjugating e 100.0 2.7E-52 9.1E-57 299.9 16.6 142 1-142 10-151 (151)
2 2r0j_A Ubiquitin carrier prote 100.0 4.3E-52 1.5E-56 298.3 14.9 142 1-142 7-148 (149)
3 2c2v_B Ubiquitin-conjugating e 100.0 3E-52 1E-56 300.6 14.0 142 1-142 11-152 (154)
4 2ayv_A Ubiquitin-conjugating e 100.0 2.1E-51 7.3E-56 299.3 16.4 140 1-140 27-166 (166)
5 1z2u_A Ubiquitin-conjugating e 100.0 1.8E-51 6E-56 295.4 15.4 141 1-141 10-150 (150)
6 2c4o_A Ubiquitin-conjugating e 100.0 2.8E-51 9.6E-56 298.4 16.1 141 1-141 25-165 (165)
7 1zdn_A Ubiquitin-conjugating e 100.0 1.5E-51 5E-56 298.1 14.1 140 1-140 19-158 (158)
8 2aak_A UBC1, ubiquitin conjuga 100.0 3.9E-51 1.3E-55 294.1 15.6 142 1-142 10-151 (152)
9 1fxt_A Ubiquitin-conjugating e 100.0 9.8E-52 3.4E-56 296.4 12.2 141 1-141 7-149 (149)
10 1ayz_A UBC2, ubiquitin-conjuga 100.0 3.2E-51 1.1E-55 299.2 14.9 141 1-141 10-150 (169)
11 1yh2_A HSPC150 protein similar 100.0 7.7E-51 2.6E-55 297.2 16.7 142 1-142 10-155 (169)
12 1jat_A Ubiquitin-conjugating e 100.0 1.8E-51 6.3E-56 296.7 12.7 142 1-142 11-152 (155)
13 2e2c_A Ubiquitin conjugating e 100.0 1.8E-50 6.3E-55 291.8 14.8 141 1-142 15-155 (156)
14 3rcz_B SUMO-conjugating enzyme 100.0 1.5E-50 5.2E-55 294.0 14.4 141 1-141 16-163 (163)
15 2bep_A Ubiquitin-conjugating e 100.0 3.4E-50 1.2E-54 291.1 15.9 142 1-142 14-159 (159)
16 3h8k_A Ubiquitin-conjugating e 100.0 4.4E-50 1.5E-54 291.8 16.3 141 1-141 9-163 (164)
17 3bzh_A Ubiquitin-conjugating e 100.0 5.6E-50 1.9E-54 298.1 16.5 141 1-141 54-194 (194)
18 2ucz_A UBC7, ubiquitin conjuga 100.0 4.5E-50 1.5E-54 292.0 15.4 141 1-141 10-164 (165)
19 2f4z_A Tgtwinscan_2721 - E2 do 100.0 3.7E-50 1.3E-54 298.8 15.1 142 1-142 38-193 (193)
20 2gjd_A Ubiquitin-conjugating e 100.0 4.5E-50 1.6E-54 290.0 14.4 141 1-141 10-157 (157)
21 2pwq_A Ubiquitin conjugating e 100.0 3.9E-50 1.3E-54 303.2 14.1 142 1-142 29-171 (216)
22 2grr_A Ubiquitin-conjugating e 100.0 1.1E-49 3.6E-54 289.1 13.7 142 1-142 13-161 (161)
23 1wzv_A Ubiquitin-conjugating e 100.0 1.4E-49 4.9E-54 286.8 13.9 141 1-142 10-152 (155)
24 3k9o_A Ubiquitin-conjugating e 100.0 2.9E-49 9.9E-54 295.9 15.7 142 1-142 11-156 (201)
25 1i7k_A Ubiquitin-conjugating e 100.0 1.6E-49 5.5E-54 292.4 12.5 141 1-142 36-176 (179)
26 3fn1_B NEDD8-conjugating enzym 100.0 1.2E-48 4.2E-53 285.0 15.6 140 1-141 20-167 (167)
27 1tte_A Ubiquitin-conjugating e 100.0 1.9E-49 6.4E-54 299.3 10.0 142 1-142 8-151 (215)
28 3e46_A Ubiquitin-conjugating e 100.0 4.3E-48 1.5E-52 297.9 15.8 142 1-142 63-208 (253)
29 3rz3_A Ubiquitin-conjugating e 100.0 2E-48 6.8E-53 287.6 13.0 142 1-142 13-174 (183)
30 2onu_A Ubiquitin-conjugating e 100.0 1.5E-48 5E-53 280.7 10.1 139 1-142 8-148 (152)
31 1yrv_A Ubiquitin-conjugating l 100.0 5E-48 1.7E-52 282.2 11.9 137 1-138 29-168 (169)
32 1c4z_D UBCH7, ubiquitin conjug 100.0 2.2E-48 7.6E-53 280.3 9.9 141 1-142 8-150 (154)
33 2awf_A Ubiquitin-conjugating e 100.0 7.8E-48 2.7E-52 282.0 11.8 134 2-135 24-172 (172)
34 2y9m_A Ubiquitin-conjugating e 100.0 4.5E-47 1.5E-51 277.9 14.9 143 1-143 12-170 (172)
35 1y8x_A Ubiquitin-conjugating e 100.0 6.6E-47 2.3E-51 274.2 14.3 135 1-138 12-147 (160)
36 2z5d_A Ubiquitin-conjugating e 100.0 1.9E-47 6.4E-52 281.2 9.7 138 1-142 31-170 (179)
37 4ddg_A Ubiquitin-conjugating e 100.0 2.1E-46 7.3E-51 305.0 15.4 142 1-142 9-150 (399)
38 2nvu_C NEDD8-conjugating enzym 100.0 2.1E-46 7.2E-51 276.1 13.8 135 1-138 32-167 (180)
39 1yf9_A Ubiquitin carrier prote 100.0 2.1E-46 7E-51 274.1 11.4 138 1-142 18-157 (171)
40 3o2u_A NEDD8-conjugating enzym 100.0 4.1E-45 1.4E-49 271.2 12.1 136 1-139 35-177 (190)
41 4ds2_A Ubiquitin-conjugating e 100.0 1E-43 3.5E-48 259.0 9.7 133 1-133 14-163 (167)
42 3ceg_A Baculoviral IAP repeat- 100.0 5.1E-42 1.7E-46 271.1 11.4 141 1-141 82-243 (323)
43 2fo3_A Ubiquitin-conjugating e 100.0 2.3E-41 7.8E-46 236.1 11.5 111 1-111 12-123 (125)
44 2q0v_A Ubiquitin-conjugating e 100.0 2.8E-42 9.7E-47 248.8 6.7 123 1-124 27-156 (156)
45 2h2y_A Ubiquitin-conjugating e 100.0 1.5E-40 5.1E-45 235.0 12.0 109 1-109 26-135 (136)
46 2a4d_A Ubiquitin-conjugating e 100.0 1.5E-40 5.1E-45 240.5 9.4 118 1-118 31-156 (160)
47 1jat_B Ubiquitin-conjugating e 100.0 2.8E-41 9.5E-46 239.3 3.2 120 1-121 12-138 (138)
48 2a7l_A Hypothetical ubiquitin- 100.0 1.9E-39 6.4E-44 229.3 10.1 105 1-105 28-136 (136)
49 2hlw_A Ubiquitin-conjugating e 100.0 4.3E-40 1.5E-44 240.3 5.9 118 1-118 41-166 (170)
50 2f4w_A Ubiquitin-conjugating e 100.0 1.4E-37 4.8E-42 230.2 12.6 110 1-112 20-132 (187)
51 1zuo_A Hypothetical protein LO 100.0 4.6E-38 1.6E-42 232.6 2.0 132 1-140 33-181 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 3.4E-27 1.2E-31 169.5 -1.2 91 2-98 39-144 (172)
53 3r3q_A Suppressor protein STP2 99.8 1.9E-20 6.4E-25 135.1 8.2 95 16-111 52-161 (162)
54 3kpa_A Probable ubiquitin fold 99.6 2.2E-17 7.6E-22 116.4 1.6 66 23-91 56-132 (168)
55 3obq_A Tumor susceptibility ge 99.6 2.5E-15 8.5E-20 106.6 6.0 80 21-106 50-138 (146)
56 2ebm_A RWD domain-containing p 95.9 0.043 1.5E-06 36.9 7.5 42 24-65 37-78 (128)
57 2yz0_A Serine/threonine-protei 94.5 0.13 4.6E-06 34.8 6.7 41 24-65 45-85 (138)
58 2daw_A RWD domain containing p 94.3 0.16 5.6E-06 35.4 6.9 23 43-65 76-98 (154)
59 2day_A Ring finger protein 25; 94.1 0.17 5.8E-06 33.8 6.5 42 24-65 39-82 (128)
60 2ebk_A RWD domain-containing p 93.4 0.16 5.5E-06 34.0 5.4 40 24-64 39-78 (128)
61 1ukx_A GCN2, GCN2 EIF2alpha ki 91.4 0.12 3.9E-06 35.1 2.6 23 42-64 63-85 (137)
62 3zqs_A E3 ubiquitin-protein li 91.0 2.1 7.2E-05 30.9 9.0 65 21-104 22-86 (186)
63 2cwb_A Chimera of immunoglobul 90.6 0.048 1.6E-06 36.2 0.0 36 106-141 20-55 (108)
64 2dax_A Protein C21ORF6; RWD do 90.2 0.21 7.3E-06 34.5 3.1 25 42-66 73-97 (152)
65 1zoq_C CREB-binding protein, i 34.6 28 0.00097 19.1 2.2 44 97-141 3-46 (47)
66 3s7v_A Major capsid protein VP 24.5 2E+02 0.0068 21.7 6.0 40 38-80 198-239 (277)
67 1h3o_B Transcription initiatio 24.4 63 0.0022 19.6 2.8 42 100-141 11-52 (76)
68 2bum_A Protocatechuate 3,4-dio 24.1 73 0.0025 23.0 3.6 26 39-64 108-138 (209)
69 2fkn_A Urocanate hydratase; ro 23.8 55 0.0019 27.2 3.0 28 113-140 276-303 (552)
70 1x87_A Urocanase protein; stru 23.6 56 0.0019 27.2 3.0 28 113-140 275-302 (551)
71 1uwk_A Urocanate hydratase; hy 23.2 57 0.002 27.2 3.0 28 113-140 280-307 (557)
72 1sid_A Polyomavirus coat prote 22.2 2.2E+02 0.0075 22.4 6.0 25 56-80 248-274 (383)
73 2ccv_A Helix pomatia agglutini 21.4 1.5E+02 0.0051 18.6 4.3 25 41-66 28-52 (101)
74 3kxt_A Chromatin protein CREN7 20.7 1.3E+02 0.0044 17.1 3.3 11 46-56 46-56 (56)
75 2yzh_A Probable thiol peroxida 20.7 74 0.0025 21.0 2.9 34 71-104 138-171 (171)
76 3qrl_A Transcription initiatio 20.1 2.1E+02 0.0072 19.3 5.6 43 24-68 32-77 (140)
No 1
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=2.7e-52 Score=299.94 Aligned_cols=142 Identities=48% Similarity=0.860 Sum_probs=139.7
Q ss_pred CcchhhhHhCCCCCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCceEe
Q 032304 1 MCSLIVWFVDTAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 80 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~icl 80 (143)
++||+++++++++|+++.|.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+
T Consensus 10 ~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl 89 (151)
T 4gpr_A 10 QKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNINKNGVICL 89 (151)
T ss_dssp HHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCC
T ss_pred HHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceECCCCEEEc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCC
Q 032304 81 DILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 142 (143)
Q Consensus 81 ~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 142 (143)
++|.++|+|+++|++||.+|+++|.+||+++|+|.+|+++|++|+++|.++||+|+++||++
T Consensus 90 ~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya~p 151 (151)
T 4gpr_A 90 DILKDQWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVLRANKKQFEDTAREWTRMYARP 151 (151)
T ss_dssp GGGTTTCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCCC
T ss_pred ccccCCCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999985
No 2
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=4.3e-52 Score=298.28 Aligned_cols=142 Identities=63% Similarity=1.097 Sum_probs=139.4
Q ss_pred CcchhhhHhCCCCCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCceEe
Q 032304 1 MCSLIVWFVDTAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 80 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~icl 80 (143)
++||++|++++++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+
T Consensus 7 ~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl 86 (149)
T 2r0j_A 7 TKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKLGRICL 86 (149)
T ss_dssp HHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCBBCC
T ss_pred HHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCCCEEec
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCC
Q 032304 81 DILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 142 (143)
Q Consensus 81 ~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 142 (143)
++|.++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||++
T Consensus 87 ~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 148 (149)
T 2r0j_A 87 DILKDKWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYANN 148 (149)
T ss_dssp GGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred hhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHccC
Confidence 99999999999999999999999999999999999999999999999999999999999985
No 3
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3e-52 Score=300.55 Aligned_cols=142 Identities=73% Similarity=1.243 Sum_probs=137.3
Q ss_pred CcchhhhHhCCCCCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCceEe
Q 032304 1 MCSLIVWFVDTAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 80 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~icl 80 (143)
++||++|++++++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+
T Consensus 11 ~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl 90 (154)
T 2c2v_B 11 IKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICL 90 (154)
T ss_dssp HHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTCBBCC
T ss_pred HHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCccCCeEEc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCC
Q 032304 81 DILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 142 (143)
Q Consensus 81 ~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 142 (143)
++|.++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||++
T Consensus 91 ~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a~~ 152 (154)
T 2c2v_B 91 DILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAMN 152 (154)
T ss_dssp HHHHTSCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred hhccCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999975
No 4
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=2.1e-51 Score=299.32 Aligned_cols=140 Identities=51% Similarity=0.877 Sum_probs=137.9
Q ss_pred CcchhhhHhCCCCCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCceEe
Q 032304 1 MCSLIVWFVDTAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 80 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~icl 80 (143)
++||++|++++++|+++.++++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+.+|.||+
T Consensus 27 ~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~G~ICL 106 (166)
T 2ayv_A 27 NKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNINSQGAICL 106 (166)
T ss_dssp HHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCTTCBBCC
T ss_pred HHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCCCCCeEEc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHc
Q 032304 81 DILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 140 (143)
Q Consensus 81 ~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a 140 (143)
++|.++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||
T Consensus 107 ~iL~~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 107 DILKDQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp GGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred ccccccCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999997
No 5
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=1.8e-51 Score=295.35 Aligned_cols=141 Identities=48% Similarity=0.840 Sum_probs=138.5
Q ss_pred CcchhhhHhCCCCCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCceEe
Q 032304 1 MCSLIVWFVDTAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 80 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~icl 80 (143)
++||++|++++++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+.+|+||+
T Consensus 10 ~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl 89 (150)
T 1z2u_A 10 QKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICL 89 (150)
T ss_dssp HHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCC
T ss_pred HHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCCCCeEee
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Q 032304 81 DILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 141 (143)
Q Consensus 81 ~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 141 (143)
++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||+
T Consensus 90 ~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 90 DILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp GGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred ccccCCCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999995
No 6
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=2.8e-51 Score=298.45 Aligned_cols=141 Identities=49% Similarity=0.847 Sum_probs=138.5
Q ss_pred CcchhhhHhCCCCCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCceEe
Q 032304 1 MCSLIVWFVDTAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 80 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~icl 80 (143)
++||++|++++++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+.+|+||+
T Consensus 25 ~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~~G~ICl 104 (165)
T 2c4o_A 25 HKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICL 104 (165)
T ss_dssp HHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCTTCBBCC
T ss_pred HHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCCCCeEee
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Q 032304 81 DILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 141 (143)
Q Consensus 81 ~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 141 (143)
++|.++|+|+++|++||.+|+++|.+||+++|+|.+|+++|++|+++|.++||+|+++||+
T Consensus 105 ~iL~~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 105 DILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp GGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHTTC
T ss_pred hhhcCCCCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999995
No 7
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-51 Score=298.08 Aligned_cols=140 Identities=36% Similarity=0.693 Sum_probs=137.8
Q ss_pred CcchhhhHhCCCCCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCceEe
Q 032304 1 MCSLIVWFVDTAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 80 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~icl 80 (143)
++||++|++++++|+++.++++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+
T Consensus 19 ~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl 98 (158)
T 1zdn_A 19 YKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICV 98 (158)
T ss_dssp HHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCH
T ss_pred HHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCCCCEEeh
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHc
Q 032304 81 DILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 140 (143)
Q Consensus 81 ~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a 140 (143)
++|.++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||
T Consensus 99 ~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 99 NVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp HHHTTTCCTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred hhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999998
No 8
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=3.9e-51 Score=294.12 Aligned_cols=142 Identities=36% Similarity=0.731 Sum_probs=138.6
Q ss_pred CcchhhhHhCCCCCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCceEe
Q 032304 1 MCSLIVWFVDTAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 80 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~icl 80 (143)
++||++|++++++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+
T Consensus 10 ~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl 89 (152)
T 2aak_A 10 MRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICL 89 (152)
T ss_dssp HHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCC
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCCCCCCCEEec
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCC
Q 032304 81 DILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 142 (143)
Q Consensus 81 ~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 142 (143)
++|.++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||+.
T Consensus 90 ~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 151 (152)
T 2aak_A 90 DILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWTA 151 (152)
T ss_dssp GGGTTSCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC-
T ss_pred hhhcCCCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHCHHHHHHHHHHHHHHHccc
Confidence 99999999999999999999999999999999999999999999999999999999999974
No 9
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=9.8e-52 Score=296.37 Aligned_cols=141 Identities=42% Similarity=0.788 Sum_probs=137.9
Q ss_pred CcchhhhHhCCCCCeEEeeCCC-CcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeC-CCce
Q 032304 1 MCSLIVWFVDTAPGISASPSED-NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK-LGRI 78 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~-~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~-~G~i 78 (143)
++||+++++++++|+++.+.++ |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+. +|.|
T Consensus 7 ~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G~i 86 (149)
T 1fxt_A 7 MKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAI 86 (149)
T ss_dssp HHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCSSSCCB
T ss_pred HHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcCCCCeE
Confidence 4799999999999999999887 9999999999999999999999999999999999999999999999999998 9999
Q ss_pred EecCCCCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Q 032304 79 CLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 141 (143)
Q Consensus 79 cl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 141 (143)
|+++|.++|+|++++++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||+
T Consensus 87 Cl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 87 CLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp CCHHHHTSCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHCC
T ss_pred eCCcCCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999995
No 10
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=3.2e-51 Score=299.17 Aligned_cols=141 Identities=40% Similarity=0.740 Sum_probs=138.5
Q ss_pred CcchhhhHhCCCCCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCceEe
Q 032304 1 MCSLIVWFVDTAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 80 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~icl 80 (143)
++||++|++++++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+.+|+||+
T Consensus 10 ~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI~~~G~ICl 89 (169)
T 1ayz_A 10 MRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICL 89 (169)
T ss_dssp HHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCC
T ss_pred HHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCCCCCCCeEee
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Q 032304 81 DILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 141 (143)
Q Consensus 81 ~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 141 (143)
++|.+.|+|+++|++||.+|++||.+|++++|+|.+|+++|++|+++|.++||+|+++||+
T Consensus 90 ~iL~~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~ 150 (169)
T 1ayz_A 90 DILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWE 150 (169)
T ss_dssp GGGTTTCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred hhhccCCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999985
No 11
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=7.7e-51 Score=297.20 Aligned_cols=142 Identities=48% Similarity=0.866 Sum_probs=139.1
Q ss_pred CcchhhhHhCCCCCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCceEe
Q 032304 1 MCSLIVWFVDTAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 80 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~icl 80 (143)
++||++|++++++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+.+|+||+
T Consensus 10 ~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~G~iCl 89 (169)
T 1yh2_A 10 KRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICL 89 (169)
T ss_dssp HHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCC
T ss_pred HHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCCcCCeEec
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCC----CcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCC
Q 032304 81 DILK----DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 142 (143)
Q Consensus 81 ~~l~----~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 142 (143)
++|. ++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||+.
T Consensus 90 ~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~ 155 (169)
T 1yh2_A 90 DVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHARQ 155 (169)
T ss_dssp GGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred ccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHHHHHccc
Confidence 9998 8999999999999999999999999999999999999999999999999999999975
No 12
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=1.8e-51 Score=296.71 Aligned_cols=142 Identities=64% Similarity=1.150 Sum_probs=139.1
Q ss_pred CcchhhhHhCCCCCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCceEe
Q 032304 1 MCSLIVWFVDTAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 80 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~icl 80 (143)
++||++|++++++||++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+
T Consensus 11 ~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl 90 (155)
T 1jat_A 11 IKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICL 90 (155)
T ss_dssp HHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCCBCC
T ss_pred HHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCCCCCEEEc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCC
Q 032304 81 DILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 142 (143)
Q Consensus 81 ~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 142 (143)
++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||++
T Consensus 91 ~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~~ 152 (155)
T 1jat_A 91 DVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAKK 152 (155)
T ss_dssp GGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSEE
T ss_pred hhhccCCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999974
No 13
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-50 Score=291.76 Aligned_cols=141 Identities=38% Similarity=0.684 Sum_probs=137.6
Q ss_pred CcchhhhHhCCCCCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCceEe
Q 032304 1 MCSLIVWFVDTAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 80 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~icl 80 (143)
++||++|++++++|+++.|.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+
T Consensus 15 ~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl 94 (156)
T 2e2c_A 15 QQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICL 94 (156)
T ss_dssp HHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCC
T ss_pred HHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCccCceEEC
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCC
Q 032304 81 DILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 142 (143)
Q Consensus 81 ~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 142 (143)
++|.++|+|+++|++||.+|+++|.+|++++|+|.+|+++| +|+++|.++||+|+++||..
T Consensus 95 ~iL~~~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~~~~~ 155 (156)
T 2e2c_A 95 DILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQSD 155 (156)
T ss_dssp GGGTTTCCTTCCHHHHHHHHHHHTTSCCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHHHHHC
T ss_pred ccccccCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999 89999999999999999864
No 14
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-50 Score=294.02 Aligned_cols=141 Identities=33% Similarity=0.635 Sum_probs=136.5
Q ss_pred CcchhhhHhCCCCCeEEeeCCC-----CcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCC
Q 032304 1 MCSLIVWFVDTAPGISASPSED-----NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 75 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~-----~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~ 75 (143)
++||++|++++++|+++.|.++ |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+.+
T Consensus 16 ~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~HPnV~~~ 95 (163)
T 3rcz_B 16 QEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPS 95 (163)
T ss_dssp HHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTT
T ss_pred HHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCccCCCCCC
Confidence 4799999999999999999866 99999999999999999999999999999999999999999999999999999
Q ss_pred CceEecCCCC--cCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Q 032304 76 GRICLDILKD--KWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 141 (143)
Q Consensus 76 G~icl~~l~~--~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 141 (143)
|+||+++|.. +|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||.
T Consensus 96 G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya~ 163 (163)
T 3rcz_B 96 GTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENAP 163 (163)
T ss_dssp SBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred CcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhCc
Confidence 9999999975 49999999999999999999999999999999999999999999999999999984
No 15
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=3.4e-50 Score=291.14 Aligned_cols=142 Identities=44% Similarity=0.790 Sum_probs=137.4
Q ss_pred CcchhhhHhC---CCCCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeC-CC
Q 032304 1 MCSLIVWFVD---TAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK-LG 76 (143)
Q Consensus 1 ~~e~~~l~~~---~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~-~G 76 (143)
++||++|+++ +++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+. +|
T Consensus 14 ~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G 93 (159)
T 2bep_A 14 KREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTG 93 (159)
T ss_dssp HHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTC
T ss_pred HHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCCccCCCCCCC
Confidence 3799999986 5889999999999999999999999999999999999999999999999999999999999995 99
Q ss_pred ceEecCCCCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCC
Q 032304 77 RICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 142 (143)
Q Consensus 77 ~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 142 (143)
+||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||++
T Consensus 94 ~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 159 (159)
T 2bep_A 94 AICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 159 (159)
T ss_dssp BBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred EEeChhhhccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999975
No 16
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=4.4e-50 Score=291.82 Aligned_cols=141 Identities=30% Similarity=0.642 Sum_probs=136.9
Q ss_pred CcchhhhHhCCCCCeEEeeCCC-CcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCceE
Q 032304 1 MCSLIVWFVDTAPGISASPSED-NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRIC 79 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~-~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~ic 79 (143)
++||+++++++++|+++.+.++ |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||
T Consensus 9 ~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~~~G~iC 88 (164)
T 3h8k_A 9 MAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVC 88 (164)
T ss_dssp HHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTSBBC
T ss_pred HHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCCCCCcEe
Confidence 4799999999999999999766 999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCC-------------CcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Q 032304 80 LDILK-------------DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 141 (143)
Q Consensus 80 l~~l~-------------~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 141 (143)
+++|. ++|+|+++|++||.+|+++|.+||+++|+|.+|+++|++|+++|.++||+|+++++.
T Consensus 89 l~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~s~~ 163 (164)
T 3h8k_A 89 ISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKSLG 163 (164)
T ss_dssp CGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHT
T ss_pred eecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 99996 789999999999999999999999999999999999999999999999999999875
No 17
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=5.6e-50 Score=298.12 Aligned_cols=141 Identities=50% Similarity=0.805 Sum_probs=138.6
Q ss_pred CcchhhhHhCCCCCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCceEe
Q 032304 1 MCSLIVWFVDTAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 80 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~icl 80 (143)
++||++|++++++||++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+.+|.||+
T Consensus 54 ~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~G~ICL 133 (194)
T 3bzh_A 54 QKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICL 133 (194)
T ss_dssp HHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTCBBCC
T ss_pred HHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceECCCCceec
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Q 032304 81 DILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 141 (143)
Q Consensus 81 ~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 141 (143)
++|.++|+|+++|.+||.+|++||.+||+++|+|.+|+++|++|+++|.++||+|+++||+
T Consensus 134 ~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya~ 194 (194)
T 3bzh_A 134 DILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 194 (194)
T ss_dssp GGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred hhhhccCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999999999999999995
No 18
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=4.5e-50 Score=292.05 Aligned_cols=141 Identities=33% Similarity=0.656 Sum_probs=136.6
Q ss_pred CcchhhhHhCCCCCeEEeeCC-CCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCceE
Q 032304 1 MCSLIVWFVDTAPGISASPSE-DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRIC 79 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~-~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~ic 79 (143)
++||++|++++++|+++.+.+ +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+++|+||
T Consensus 10 ~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~G~iC 89 (165)
T 2ucz_A 10 LKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVC 89 (165)
T ss_dssp HHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCTTBCTTSBBC
T ss_pred HHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccCCCCCCCcEe
Confidence 379999999999999999975 7999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCC-------------CCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Q 032304 80 LDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 141 (143)
Q Consensus 80 l~~l-------------~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 141 (143)
+++| .++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++++.
T Consensus 90 l~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~~~~~~~ 164 (165)
T 2ucz_A 90 ISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLSILKSLG 164 (165)
T ss_dssp CGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHHHHHHTT
T ss_pred ehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHhh
Confidence 9999 6789999999999999999999999999999999999999999999999999999975
No 19
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=3.7e-50 Score=298.83 Aligned_cols=142 Identities=45% Similarity=0.772 Sum_probs=135.1
Q ss_pred CcchhhhHhCCC-------------CCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccc
Q 032304 1 MCSLIVWFVDTA-------------PGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI 67 (143)
Q Consensus 1 ~~e~~~l~~~~~-------------~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i 67 (143)
++||++|+++++ +||++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+|
T Consensus 38 ~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i 117 (193)
T 2f4z_A 38 LKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKMKFVTKI 117 (193)
T ss_dssp HHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred HHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeEEEecCC
Confidence 479999999987 8999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeee-CCCceEecCCCCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCC
Q 032304 68 YHPNID-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 142 (143)
Q Consensus 68 ~HPni~-~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 142 (143)
|||||+ .+|+||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||++
T Consensus 118 ~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~~~d~~~f~~~ar~~t~~ya~~ 193 (193)
T 2f4z_A 118 WHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMIENHPLFVQTAKLWTETFAKE 193 (193)
T ss_dssp CBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC-
T ss_pred ccCCCcCCCCEEECccccccCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHccC
Confidence 999999 599999999999999999999999999999999999999999999999999999999999999999974
No 20
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=4.5e-50 Score=289.98 Aligned_cols=141 Identities=31% Similarity=0.617 Sum_probs=136.5
Q ss_pred CcchhhhHhCCCCCeEEeeCC-----CCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCC
Q 032304 1 MCSLIVWFVDTAPGISASPSE-----DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 75 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~-----~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~ 75 (143)
++||++|++++++|+++.|.+ +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 10 ~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 89 (157)
T 2gjd_A 10 QEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHPNVYPS 89 (157)
T ss_dssp HHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTCCCTTBCTT
T ss_pred HHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCCccCCCCCC
Confidence 479999999999999999874 489999999999999999999999999999999999999999999999999999
Q ss_pred CceEecCCCC--cCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Q 032304 76 GRICLDILKD--KWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 141 (143)
Q Consensus 76 G~icl~~l~~--~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 141 (143)
|+||+++|.. +|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||+
T Consensus 90 G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 157 (157)
T 2gjd_A 90 GTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYSK 157 (157)
T ss_dssp SBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHHHHHHHHHCHHHHHHHHHHHHHHTBC
T ss_pred CcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999987 79999999999999999999999999999999999999999999999999999996
No 21
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=3.9e-50 Score=303.21 Aligned_cols=142 Identities=48% Similarity=0.822 Sum_probs=138.7
Q ss_pred CcchhhhHhCCCCCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeee-CCCceE
Q 032304 1 MCSLIVWFVDTAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID-KLGRIC 79 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~-~~G~ic 79 (143)
++||++|++++++||++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+ .+|.||
T Consensus 29 ~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G~IC 108 (216)
T 2pwq_A 29 QKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNISSQTGAIC 108 (216)
T ss_dssp HHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBC
T ss_pred HHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCcCCCCEEE
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999999 489999
Q ss_pred ecCCCCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCC
Q 032304 80 LDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 142 (143)
Q Consensus 80 l~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 142 (143)
+++|.++|+|+++|++||.+|++||.+|++++|+|.+|+++|++|+++|.++||+|+++||++
T Consensus 109 L~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~~ 171 (216)
T 2pwq_A 109 LDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFATG 171 (216)
T ss_dssp CHHHHHHCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred chhhcccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999999999999999999999999975
No 22
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=1.1e-49 Score=289.11 Aligned_cols=142 Identities=31% Similarity=0.641 Sum_probs=136.4
Q ss_pred CcchhhhHhCCCCCeEEeeCC-----CCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCC
Q 032304 1 MCSLIVWFVDTAPGISASPSE-----DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 75 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~-----~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~ 75 (143)
++||++|++++++|+++.|.. +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 13 ~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 92 (161)
T 2grr_A 13 AQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPS 92 (161)
T ss_dssp HHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCSTTBCTT
T ss_pred HHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCcccCCCCCC
Confidence 479999999999999999863 689999999999999999999999999999999999999999999999999999
Q ss_pred CceEecCCCC--cCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCC
Q 032304 76 GRICLDILKD--KWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 142 (143)
Q Consensus 76 G~icl~~l~~--~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 142 (143)
|.||+++|.. +|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||++
T Consensus 93 G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 161 (161)
T 2grr_A 93 GTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 161 (161)
T ss_dssp SBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC-
T ss_pred CeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Confidence 9999999975 899999999999999999999999999999999999999999999999999999975
No 23
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=1.4e-49 Score=286.77 Aligned_cols=141 Identities=31% Similarity=0.598 Sum_probs=137.4
Q ss_pred CcchhhhHhCCCCCeEE-eeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCceE
Q 032304 1 MCSLIVWFVDTAPGISA-SPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRIC 79 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v-~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~ic 79 (143)
++||++|++++++|+++ .++++|+++|+++|. |++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||
T Consensus 10 ~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iC 88 (155)
T 1wzv_A 10 VKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDENGQIC 88 (155)
T ss_dssp HHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBCC
T ss_pred HHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCCCCCeEe
Confidence 47999999999999999 888999999999999 9999999999999999999999999999999999999999999999
Q ss_pred ecCC-CCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCC
Q 032304 80 LDIL-KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 142 (143)
Q Consensus 80 l~~l-~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 142 (143)
+++| .++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||++
T Consensus 89 l~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~ 152 (155)
T 1wzv_A 89 LPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGVD 152 (155)
T ss_dssp CGGGCTTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCEE
T ss_pred ecCCCccCCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999 89999999999999999999999999999999999999999999999999999999974
No 24
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=2.9e-49 Score=295.93 Aligned_cols=142 Identities=44% Similarity=0.790 Sum_probs=137.6
Q ss_pred CcchhhhHhC---CCCCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeC-CC
Q 032304 1 MCSLIVWFVD---TAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK-LG 76 (143)
Q Consensus 1 ~~e~~~l~~~---~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~-~G 76 (143)
++||++|+++ ++.||++.|.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+. +|
T Consensus 11 ~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~~G 90 (201)
T 3k9o_A 11 KREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTG 90 (201)
T ss_dssp HHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTC
T ss_pred HHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcccCCCcCCCC
Confidence 4799999987 3789999999999999999999999999999999999999999999999999999999999995 99
Q ss_pred ceEecCCCCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCC
Q 032304 77 RICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 142 (143)
Q Consensus 77 ~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 142 (143)
.||+++|.++|+|+++|++||.+|+++|.+||+++|+|.+|+++|++|+++|.++||+|+++||++
T Consensus 91 ~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 156 (201)
T 3k9o_A 91 AICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 156 (201)
T ss_dssp BBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred eeeCcccccCCCCCCCHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999999999999999999999999999999985
No 25
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-49 Score=292.36 Aligned_cols=141 Identities=40% Similarity=0.637 Sum_probs=137.2
Q ss_pred CcchhhhHhCCCCCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCceEe
Q 032304 1 MCSLIVWFVDTAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 80 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~icl 80 (143)
++||++|++++++||++.|+++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+
T Consensus 36 ~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~G~ICL 115 (179)
T 1i7k_A 36 QQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNISL 115 (179)
T ss_dssp HHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTTCBBCC
T ss_pred HHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCccccCCeEEc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCC
Q 032304 81 DILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 142 (143)
Q Consensus 81 ~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 142 (143)
++|.+.|+|+++|++||.+|+++|.+|++++|+|.+|+++| +|+++|.++|++++++++.+
T Consensus 116 ~iL~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~~~~~ 176 (179)
T 1i7k_A 116 DILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVTS 176 (179)
T ss_dssp GGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHTTCC-
T ss_pred ccCcCcCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999 99999999999999998864
No 26
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=1.2e-48 Score=284.96 Aligned_cols=140 Identities=28% Similarity=0.579 Sum_probs=134.5
Q ss_pred CcchhhhHhCCCCCeEEee-CCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCceE
Q 032304 1 MCSLIVWFVDTAPGISASP-SEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRIC 79 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p-~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~ic 79 (143)
++||++|++++++|+++.+ +++|++.|+++| ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||
T Consensus 20 ~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iC 98 (167)
T 3fn1_B 20 VKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEIC 98 (167)
T ss_dssp HHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSBCTTCCBC
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCCCCCCEEe
Confidence 4799999999999999996 468899999998 89999999999999999999999999999999999999999999999
Q ss_pred ecCCCC------cCCcccCHHHHHHHHHhcccC-CCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Q 032304 80 LDILKD------KWSPALQIRTVLLSIQALLSA-PNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 141 (143)
Q Consensus 80 l~~l~~------~W~p~~~i~~il~~i~~ll~~-p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 141 (143)
+++|.. +|+|+++|++||.+|+++|.+ ||+++|+|.+|+++|++|+++|.++||+|+++||+
T Consensus 99 l~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~~A~ 167 (167)
T 3fn1_B 99 LSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYAR 167 (167)
T ss_dssp CGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred chhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 999975 799999999999999999999 79999999999999999999999999999999996
No 27
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=1.9e-49 Score=299.27 Aligned_cols=142 Identities=41% Similarity=0.779 Sum_probs=137.4
Q ss_pred CcchhhhHhCCCCCeEEeeCCC-CcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeC-CCce
Q 032304 1 MCSLIVWFVDTAPGISASPSED-NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK-LGRI 78 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~-~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~-~G~i 78 (143)
++||++|++++++||++.|.++ ++++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+. +|.|
T Consensus 8 ~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G~I 87 (215)
T 1tte_A 8 MKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAI 87 (215)
T ss_dssp HHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSCSSSSCC
T ss_pred HHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCcCCCCEE
Confidence 4799999999999999999876 4669999999999999999999999999999999999999999999999999 9999
Q ss_pred EecCCCCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCC
Q 032304 79 CLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 142 (143)
Q Consensus 79 cl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 142 (143)
|+++|.++|+|+++|++||.+|++||.+|++++|+|.+|+++|++|++.|.++||+|+++||++
T Consensus 88 CL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA~~ 151 (215)
T 1tte_A 88 CLDILRNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYASE 151 (215)
T ss_dssp CSSTTTCCSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHSSCC
T ss_pred ECccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999999999999999999999999975
No 28
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=4.3e-48 Score=297.86 Aligned_cols=142 Identities=44% Similarity=0.790 Sum_probs=137.6
Q ss_pred CcchhhhHhC---CCCCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeC-CC
Q 032304 1 MCSLIVWFVD---TAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK-LG 76 (143)
Q Consensus 1 ~~e~~~l~~~---~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~-~G 76 (143)
++||++|+++ ++.||++.|.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+. +|
T Consensus 63 ~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~~G 142 (253)
T 3e46_A 63 KREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTG 142 (253)
T ss_dssp HHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTC
T ss_pred HHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCCccCCCC
Confidence 3799999987 4789999999999999999999999999999999999999999999999999999999999995 99
Q ss_pred ceEecCCCCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCC
Q 032304 77 RICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 142 (143)
Q Consensus 77 ~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 142 (143)
.||+++|.++|+|+++|++||.+|+++|.+||+++|+|.+|+++|++|++.|.++||+|+++||++
T Consensus 143 ~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~~ 208 (253)
T 3e46_A 143 AICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 208 (253)
T ss_dssp BBCCGGGTTCCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred eeecccccCCCCCCCCHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999999999999999999999999999999975
No 29
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=2e-48 Score=287.64 Aligned_cols=142 Identities=31% Similarity=0.616 Sum_probs=135.8
Q ss_pred CcchhhhHhCCCCCeEEe-eCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCceE
Q 032304 1 MCSLIVWFVDTAPGISAS-PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRIC 79 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~-p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~ic 79 (143)
++||++|++++++|+++. ++++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+++|+||
T Consensus 13 ~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iC 92 (183)
T 3rz3_A 13 LLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVC 92 (183)
T ss_dssp HHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTTBCTTSBBC
T ss_pred HHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCCCCCCCcEe
Confidence 479999999999999999 6788999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCC-------------CcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHH------CHHHHHHHHHHHHHHHc
Q 032304 80 LDILK-------------DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT------NEAEAVETAKEWTRLYA 140 (143)
Q Consensus 80 l~~l~-------------~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~------~~~~f~~~~~~~~~~~a 140 (143)
+++|. ++|+|+++|++||.+|++||.+||+++|+|.+|+++|++ |+++|.++||++++++.
T Consensus 93 lsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y~~~v~~~v~~s~ 172 (183)
T 3rz3_A 93 ISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQVLGTK 172 (183)
T ss_dssp CTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHH
T ss_pred hhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhcccccccHHHHHHHHHHHHHHHH
Confidence 99996 789999999999999999999999999999999999998 78999999999999986
Q ss_pred CC
Q 032304 141 SG 142 (143)
Q Consensus 141 ~~ 142 (143)
.+
T Consensus 173 ~~ 174 (183)
T 3rz3_A 173 VD 174 (183)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 30
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=1.5e-48 Score=280.75 Aligned_cols=139 Identities=34% Similarity=0.744 Sum_probs=133.0
Q ss_pred CcchhhhHhCCCCCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeC-CCceE
Q 032304 1 MCSLIVWFVDTAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK-LGRIC 79 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~-~G~ic 79 (143)
++||++++++ |+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+. +|+||
T Consensus 8 ~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~~G~iC 84 (152)
T 2onu_A 8 QCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEASGSVC 84 (152)
T ss_dssp HHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTTCBBC
T ss_pred HHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCcCCeEe
Confidence 3789998874 8889999999999999999999999999999999999999999999999999999999995 99999
Q ss_pred ecCCCCcCCcccCHHHHHHH-HHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCC
Q 032304 80 LDILKDKWSPALQIRTVLLS-IQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 142 (143)
Q Consensus 80 l~~l~~~W~p~~~i~~il~~-i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 142 (143)
+++|.++|+|++++++||.+ |++||.+|++++|+|.+|+++|++|+++|.++||+|+++||++
T Consensus 85 l~il~~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~~ 148 (152)
T 2onu_A 85 LDVINQTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKLYASK 148 (152)
T ss_dssp HHHHHHHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHSCG
T ss_pred cccccccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999 6899999999999999999999999999999999999999975
No 31
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5e-48 Score=282.19 Aligned_cols=137 Identities=28% Similarity=0.496 Sum_probs=132.0
Q ss_pred CcchhhhHhCCCCCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeee-eCCCceE
Q 032304 1 MCSLIVWFVDTAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI-DKLGRIC 79 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni-~~~G~ic 79 (143)
++||++|++++++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+|||||| +.+|+||
T Consensus 29 ~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~~G~IC 108 (169)
T 1yrv_A 29 HRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPHTGQPC 108 (169)
T ss_dssp HHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTTBCTTTCCBC
T ss_pred HHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCcccCCCCeEe
Confidence 379999999999999999999999999999999999999999999999999999999999999999999999 6899999
Q ss_pred ecCCC--CcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHH
Q 032304 80 LDILK--DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRL 138 (143)
Q Consensus 80 l~~l~--~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~ 138 (143)
+++|. ++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++ |+++++
T Consensus 109 L~iL~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 109 IDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp CHHHHCGGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred ehhhcCCcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 99998 89999999999999999999999999999999999999999999999 888764
No 32
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=2.2e-48 Score=280.29 Aligned_cols=141 Identities=33% Similarity=0.678 Sum_probs=133.1
Q ss_pred CcchhhhHhCCCCCeEEee-CCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCceE
Q 032304 1 MCSLIVWFVDTAPGISASP-SEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRIC 79 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p-~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~ic 79 (143)
++||++|++++++|+.+.+ +++|+++|+++|. |++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||
T Consensus 8 ~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iC 86 (154)
T 1c4z_D 8 MKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVC 86 (154)
T ss_dssp HHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTCBBC
T ss_pred HHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCCCCEEE
Confidence 4799999999999998654 6789999999998 9999999999999999999999999999999999999999999999
Q ss_pred ecCCC-CcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCC
Q 032304 80 LDILK-DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 142 (143)
Q Consensus 80 l~~l~-~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 142 (143)
+++|. ++|+|++++++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||++
T Consensus 87 l~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (154)
T 1c4z_D 87 LPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEK 150 (154)
T ss_dssp CTTTSSSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC---
T ss_pred CCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhccc
Confidence 99996 8999999999999999999999999999999999999999999999999999999975
No 33
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=7.8e-48 Score=281.95 Aligned_cols=134 Identities=34% Similarity=0.754 Sum_probs=102.9
Q ss_pred cchhhhHhCCCCCeEEeeCC-CCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCceEe
Q 032304 2 CSLIVWFVDTAPGISASPSE-DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 80 (143)
Q Consensus 2 ~e~~~l~~~~~~~i~v~p~~-~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~icl 80 (143)
+||++|++++++||++.+.+ +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+.+|+||+
T Consensus 24 kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV~~~G~ICl 103 (172)
T 2awf_A 24 RQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCI 103 (172)
T ss_dssp HHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTCBBCC
T ss_pred HHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCCCCCCCcEeh
Confidence 79999999999999999875 79999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCC-------------CcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHH-HHHHHHHHH
Q 032304 81 DILK-------------DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEA-EAVETAKEW 135 (143)
Q Consensus 81 ~~l~-------------~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~-~f~~~~~~~ 135 (143)
++|. ++|+|+++|++||.+|++||.+|++++|+|.+|+++|++|++ +|+++||+|
T Consensus 104 siL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 104 SILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp GGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC-----------------------------
T ss_pred hhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 9996 689999999999999999999999999999999999999999 999999975
No 34
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=4.5e-47 Score=277.93 Aligned_cols=143 Identities=27% Similarity=0.490 Sum_probs=133.1
Q ss_pred CcchhhhHh-C-C------CC---CeEEee-CCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEec-cc
Q 032304 1 MCSLIVWFV-D-T------AP---GISASP-SEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLT-KI 67 (143)
Q Consensus 1 ~~e~~~l~~-~-~------~~---~i~v~p-~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t-~i 67 (143)
++||++|++ + + +. ++.+.| +++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.| +|
T Consensus 12 ~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~~i 91 (172)
T 2y9m_A 12 VKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISFMQNNI 91 (172)
T ss_dssp HHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECTTSC
T ss_pred HHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEEEEeeCCe
Confidence 479999998 5 3 33 577888 7899999999999999999999999999999999999999999999 99
Q ss_pred eeeeee-CCCceEecCCC-CcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHH-CHHHHHHHHHHHHHHHcCCC
Q 032304 68 YHPNID-KLGRICLDILK-DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT-NEAEAVETAKEWTRLYASGA 143 (143)
Q Consensus 68 ~HPni~-~~G~icl~~l~-~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~-~~~~f~~~~~~~~~~~a~~~ 143 (143)
|||||+ .+|+||+++|. ++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++ |+++|.++||+|+++++.-|
T Consensus 92 ~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~d~~~f~~~~~~~~~~~~~~~ 170 (172)
T 2y9m_A 92 LHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVKYFLAERERIN 170 (172)
T ss_dssp CCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHTTTCHHHHHHHHHHHHHHHHC--
T ss_pred ecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh
Confidence 999997 79999999998 899999999999999999999999999999999999999 99999999999999987643
No 35
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.6e-47 Score=274.16 Aligned_cols=135 Identities=30% Similarity=0.567 Sum_probs=129.8
Q ss_pred CcchhhhHhCCCCCeEEe-eCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCceE
Q 032304 1 MCSLIVWFVDTAPGISAS-PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRIC 79 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~-p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~ic 79 (143)
++||+++ ++++|+++. ++++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||
T Consensus 12 ~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iC 88 (160)
T 1y8x_A 12 QKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVC 88 (160)
T ss_dssp HHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCBBC
T ss_pred HHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCCCCCeEE
Confidence 3688888 678999998 7899999999988 99999999999999999999999999999999999999999999999
Q ss_pred ecCCCCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHH
Q 032304 80 LDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRL 138 (143)
Q Consensus 80 l~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~ 138 (143)
+++|.++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|++.
T Consensus 89 l~iL~~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~ 147 (160)
T 1y8x_A 89 LNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 147 (160)
T ss_dssp CGGGTTTCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHHHS
T ss_pred cccchhhccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999874
No 36
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.9e-47 Score=281.22 Aligned_cols=138 Identities=33% Similarity=0.668 Sum_probs=131.6
Q ss_pred CcchhhhHhCCCCCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeC-CCceE
Q 032304 1 MCSLIVWFVDTAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK-LGRIC 79 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~-~G~ic 79 (143)
++||++++. +|+++.+. +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+. +|.||
T Consensus 31 ~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~~~G~IC 106 (179)
T 2z5d_A 31 DTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVC 106 (179)
T ss_dssp HHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBC
T ss_pred HHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCCCCCeEe
Confidence 368888874 58888887 67999999999999999999999999999999999999999999999999998 99999
Q ss_pred ecCCCCcCCcccCHHHHHHH-HHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCC
Q 032304 80 LDILKDKWSPALQIRTVLLS-IQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 142 (143)
Q Consensus 80 l~~l~~~W~p~~~i~~il~~-i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 142 (143)
+++|.++|+|+++|++||.+ |++||.+||+++|+|.+|+++|++|+++|.++||+|+++||++
T Consensus 107 L~iL~~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a~~ 170 (179)
T 2z5d_A 107 LDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATE 170 (179)
T ss_dssp HHHHHHHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSSH
T ss_pred ccccccCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHccc
Confidence 99999999999999999999 9999999999999999999999999999999999999999973
No 37
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=2.1e-46 Score=304.97 Aligned_cols=142 Identities=49% Similarity=0.830 Sum_probs=139.6
Q ss_pred CcchhhhHhCCCCCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCceEe
Q 032304 1 MCSLIVWFVDTAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 80 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~icl 80 (143)
++||++|++++++|+++.|.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+++|.||+
T Consensus 9 ~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl 88 (399)
T 4ddg_A 9 HKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSISL 88 (399)
T ss_dssp HHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCTTCBBCC
T ss_pred HHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCCCCeEeC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCC
Q 032304 81 DILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 142 (143)
Q Consensus 81 ~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 142 (143)
++|.++|+|++++++||.+|+++|.+||+++|+|.+|+++|++|+++|.++||+|+++||+.
T Consensus 89 ~il~~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~~ 150 (399)
T 4ddg_A 89 DILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAMG 150 (399)
T ss_dssp GGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHTSC
T ss_pred cccccCCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999975
No 38
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.1e-46 Score=276.09 Aligned_cols=135 Identities=29% Similarity=0.540 Sum_probs=129.9
Q ss_pred CcchhhhHhCCCCCeEEe-eCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCceE
Q 032304 1 MCSLIVWFVDTAPGISAS-PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRIC 79 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~-p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~ic 79 (143)
++||+++ ++++|+++. ++++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||
T Consensus 32 ~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV~~~G~iC 108 (180)
T 2nvu_C 32 QKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVA 108 (180)
T ss_dssp HHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTSBBC
T ss_pred HHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCCCCCCcEE
Confidence 3688888 678999998 8899999999998 99999999999999999999999999999999999999999999999
Q ss_pred ecCCCCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHH
Q 032304 80 LDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRL 138 (143)
Q Consensus 80 l~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~ 138 (143)
+++|.++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|++.
T Consensus 109 l~iL~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~~ 167 (180)
T 2nvu_C 109 LNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 167 (180)
T ss_dssp CGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHS
T ss_pred cccccccCCCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999874
No 39
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=2.1e-46 Score=274.13 Aligned_cols=138 Identities=29% Similarity=0.570 Sum_probs=130.5
Q ss_pred CcchhhhHhCCCCCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeC-CCceE
Q 032304 1 MCSLIVWFVDTAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK-LGRIC 79 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~-~G~ic 79 (143)
++||+++++++. ++ +.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+. +|+||
T Consensus 18 ~~El~~l~~~~~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~~G~iC 93 (171)
T 1yf9_A 18 EMDYMRLCNSTR-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDERSGSVC 93 (171)
T ss_dssp HHHHHHHHSSSS-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBC
T ss_pred HHHHHHHHhCCC-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcccCCeEe
Confidence 379999999884 44 35789999999999999999999999999999999999999999999999999995 99999
Q ss_pred ecCCCCcCCcccCHHHHHHHH-HhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCC
Q 032304 80 LDILKDKWSPALQIRTVLLSI-QALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 142 (143)
Q Consensus 80 l~~l~~~W~p~~~i~~il~~i-~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 142 (143)
+++|.++|+|+++|++||.+| ++||.+|++++|+|.+|+++|++|+++|.++||+|+++||++
T Consensus 94 l~iL~~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a~~ 157 (171)
T 1yf9_A 94 LDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHATP 157 (171)
T ss_dssp HHHHHHHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHHHCCH
T ss_pred ccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCh
Confidence 999999999999999999997 799999999999999999999999999999999999999974
No 40
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=4.1e-45 Score=271.23 Aligned_cols=136 Identities=32% Similarity=0.570 Sum_probs=130.0
Q ss_pred CcchhhhHhCCCCCeEEe----eCCCCcc---eEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeee
Q 032304 1 MCSLIVWFVDTAPGISAS----PSEDNMR---YFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID 73 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~----p~~~~~~---~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~ 73 (143)
++||++++ +++|+++. ++++|++ +|+++|. |++|||+||+|+++|.||++||++||+|+|.|++|||||+
T Consensus 35 ~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~ 111 (190)
T 3o2u_A 35 KRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNID 111 (190)
T ss_dssp HHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSCCCCTTBC
T ss_pred HHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecCcccCCCC
Confidence 46888888 77899998 8899999 9999997 7889999999999999999999999999999999999999
Q ss_pred CCCceEecCCCCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHH
Q 032304 74 KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLY 139 (143)
Q Consensus 74 ~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~ 139 (143)
.+|.||+++|.++|+|+++|++||.+|+++|.+||+++|+|.+|+++|++|+++|.++||+|++.+
T Consensus 112 ~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~aa~~~~~d~~~f~~~ar~~~~~~ 177 (190)
T 3o2u_A 112 LKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSGG 177 (190)
T ss_dssp TTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHTCHHHHHHHHHHHHBTC
T ss_pred CCCeEechhccCCCCCCCCHHHHHHHHHHHHhCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999999654
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=1e-43 Score=259.02 Aligned_cols=133 Identities=21% Similarity=0.453 Sum_probs=125.6
Q ss_pred CcchhhhHhCC------------CCCeEEeeCCCCcceEEEEEECCCCCCCC--CcEEEEEEEcCCCCCCCCCeEEEecc
Q 032304 1 MCSLIVWFVDT------------APGISASPSEDNMRYFNVMILGPTQSPYE--GGVFKLELFLPEEYPMAAPKVRFLTK 66 (143)
Q Consensus 1 ~~e~~~l~~~~------------~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~--gg~f~~~i~fp~~yP~~pP~v~f~t~ 66 (143)
++||++|++++ +.|+++.++++|+++|+++|.||++|||+ ||+|+++|.||++||++||+|+|.|+
T Consensus 14 ~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~v~f~t~ 93 (167)
T 4ds2_A 14 IKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEPPTVRFVTP 93 (167)
T ss_dssp HHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred HHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCCCCEEEEeCC
Confidence 47999999987 78999999999999999999999999999 99999999999999999999999999
Q ss_pred ceeeeeeCCCceEecCCCCcCCcccCHHHHH-HHHHhcccC--CCCCCcccHHHHHHHHHCHHHHHHHHH
Q 032304 67 IYHPNIDKLGRICLDILKDKWSPALQIRTVL-LSIQALLSA--PNPDDPLSENIAKHWKTNEAEAVETAK 133 (143)
Q Consensus 67 i~HPni~~~G~icl~~l~~~W~p~~~i~~il-~~i~~ll~~--p~~~~p~n~~a~~~~~~~~~~f~~~~~ 133 (143)
+|||||+.+|.||+++|.++|+|+++++++| ..|++|+.+ |++++|+|.||+++|++|+++|.++||
T Consensus 94 i~HPnv~~~G~iCl~il~~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~~~d~~~f~~~vr 163 (167)
T 4ds2_A 94 VYSPLVTGEGGICDRMVNDFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYLEKFPQDFAARVR 163 (167)
T ss_dssp CCCSSCCTTSCCCTHHHHTTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHHHHCHHHHHHHHT
T ss_pred cccccCCCCCEEEcccCcCCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHHHHCHHHHHHHHh
Confidence 9999999999999999999999999999965 457777765 899999999999999999999999998
No 42
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=5.1e-42 Score=271.09 Aligned_cols=141 Identities=26% Similarity=0.515 Sum_probs=132.4
Q ss_pred CcchhhhHhCCCC----CeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecc-----ceeee
Q 032304 1 MCSLIVWFVDTAP----GISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTK-----IYHPN 71 (143)
Q Consensus 1 ~~e~~~l~~~~~~----~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~-----i~HPn 71 (143)
++||+.|++++++ ++.+.++++|++.|+++|.||++|||+||+|+++|.||++||++||+|+|.|+ +||||
T Consensus 82 ~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ifHPN 161 (323)
T 3ceg_A 82 AQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPN 161 (323)
T ss_dssp HHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTCCCBTT
T ss_pred HHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcccccCC
Confidence 4799999999876 56788889999999999999999999999999999999999999999999998 99999
Q ss_pred eeCCCceEecCCC-------CcCCccc-CHHHHHHHHHhccc--CCCCCCcccHHH--HHHHHHCHHHHHHHHHHHHHHH
Q 032304 72 IDKLGRICLDILK-------DKWSPAL-QIRTVLLSIQALLS--APNPDDPLSENI--AKHWKTNEAEAVETAKEWTRLY 139 (143)
Q Consensus 72 i~~~G~icl~~l~-------~~W~p~~-~i~~il~~i~~ll~--~p~~~~p~n~~a--~~~~~~~~~~f~~~~~~~~~~~ 139 (143)
|+.+|+||+++|. ++|+|++ +|.+||.+|++||. +|++++|+|.++ +.++.+|++.|.++||+|+++|
T Consensus 162 V~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~Y~~~vr~~t~k~ 241 (323)
T 3ceg_A 162 LYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQATVKW 241 (323)
T ss_dssp BCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhhhhHHHHHHHHHHHHHHH
Confidence 9999999999997 6899999 89999999999996 688899999987 5889999999999999999999
Q ss_pred cC
Q 032304 140 AS 141 (143)
Q Consensus 140 a~ 141 (143)
|+
T Consensus 242 A~ 243 (323)
T 3ceg_A 242 AM 243 (323)
T ss_dssp TT
T ss_pred hh
Confidence 96
No 43
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=2.3e-41 Score=236.08 Aligned_cols=111 Identities=29% Similarity=0.548 Sum_probs=102.7
Q ss_pred CcchhhhHhCCCCCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccc-eeeeeeCCCceE
Q 032304 1 MCSLIVWFVDTAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI-YHPNIDKLGRIC 79 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i-~HPni~~~G~ic 79 (143)
++||+++++++++|+++.++++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++ |||||+.+|+||
T Consensus 12 ~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~~G~iC 91 (125)
T 2fo3_A 12 QKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVYSNGDIC 91 (125)
T ss_dssp HHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTBCTTSBBC
T ss_pred HHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcCCCCCEEE
Confidence 3799999999999999999999999999999999999999999999999999999999999999997 999999999999
Q ss_pred ecCCCCcCCcccCHHHHHHHHHhcccCCCCCC
Q 032304 80 LDILKDKWSPALQIRTVLLSIQALLSAPNPDD 111 (143)
Q Consensus 80 l~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~ 111 (143)
+++|.++|+|++++++||.+|+++|.+|+.+.
T Consensus 92 l~iL~~~W~P~~~i~~vl~si~~ll~~p~~~~ 123 (125)
T 2fo3_A 92 LSLLGDDYNPSLSISGLVLSIISMLSSAKEKK 123 (125)
T ss_dssp CGGGTTTCCTTCCHHHHHHHHHHHHC------
T ss_pred chhcCCCCCCCCcHHHHHHHHHHHHhCccccc
Confidence 99999999999999999999999999998653
No 44
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=2.8e-42 Score=248.82 Aligned_cols=123 Identities=25% Similarity=0.444 Sum_probs=113.7
Q ss_pred CcchhhhHhC-CCCCeEEeeCC-C--CcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCC
Q 032304 1 MCSLIVWFVD-TAPGISASPSE-D--NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLG 76 (143)
Q Consensus 1 ~~e~~~l~~~-~~~~i~v~p~~-~--~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G 76 (143)
++||++++++ +++|+++.+.+ + |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+.+|
T Consensus 27 ~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNV~~~G 106 (156)
T 2q0v_A 27 LDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEMSCVDNCG 106 (156)
T ss_dssp HHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTS
T ss_pred HHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccccCCCccCC
Confidence 4799999999 88999999853 3 599999999999999999999999999999999999999999999999999999
Q ss_pred ce---EecCCCCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHC
Q 032304 77 RI---CLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTN 124 (143)
Q Consensus 77 ~i---cl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~ 124 (143)
+| |+++|. +|+|+++|++||.+|+++|.+|++++++|.+|+++|++|
T Consensus 107 ~icisCL~iL~-~WsP~~ti~~vL~sI~~ll~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 107 RVIKNNLHILK-NWNRNYTIETILISLRQEMLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp BBCGGGSHHHH-TCCTTCCHHHHHHHHHHHTTSTTTTTCCCCCTTCBC---
T ss_pred eEehhhccccc-CCCCcCcHHHHHHHHHHHHhCCCCCCcCChHHHHHhhhC
Confidence 99 888887 599999999999999999999999999999999998865
No 45
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.5e-40 Score=234.99 Aligned_cols=109 Identities=28% Similarity=0.546 Sum_probs=105.8
Q ss_pred CcchhhhHhCCCCCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccc-eeeeeeCCCceE
Q 032304 1 MCSLIVWFVDTAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI-YHPNIDKLGRIC 79 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i-~HPni~~~G~ic 79 (143)
++||+++++++++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++ |||||+.+|+||
T Consensus 26 ~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~~G~IC 105 (136)
T 2h2y_A 26 QKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVYSNGDIC 105 (136)
T ss_dssp HHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBCTTCCBC
T ss_pred HHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCCCCCEEE
Confidence 4799999999999999999999999999999999999999999999999999999999999999997 999999999999
Q ss_pred ecCCCCcCCcccCHHHHHHHHHhcccCCCC
Q 032304 80 LDILKDKWSPALQIRTVLLSIQALLSAPNP 109 (143)
Q Consensus 80 l~~l~~~W~p~~~i~~il~~i~~ll~~p~~ 109 (143)
+++|.++|+|++++++||.+|++||.+|+.
T Consensus 106 l~iL~~~WsP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 106 LSVLGDDYNPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp CGGGTTTCCTTCCHHHHHHHHHHHHSSSCC
T ss_pred CccccCCCCCCCcHHHHHHHHHHHHhCcCc
Confidence 999999999999999999999999999875
No 46
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=1.5e-40 Score=240.53 Aligned_cols=118 Identities=25% Similarity=0.404 Sum_probs=110.4
Q ss_pred CcchhhhHhCCCCC-eEEee-CCCC--cceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeee-CC
Q 032304 1 MCSLIVWFVDTAPG-ISASP-SEDN--MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID-KL 75 (143)
Q Consensus 1 ~~e~~~l~~~~~~~-i~v~p-~~~~--~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~-~~ 75 (143)
++||+++++++++| +.+.+ +++| +++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+ .+
T Consensus 31 ~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~ 110 (160)
T 2a4d_A 31 LEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSN 110 (160)
T ss_dssp HHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTT
T ss_pred HHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCceeCCEECCC
Confidence 47999999999888 77887 4554 89999999999999999999999999999999999999999999999999 69
Q ss_pred CceEecCCC--CcCCcccCHHHHHHHHHhccc-CCCCCCcccHHHH
Q 032304 76 GRICLDILK--DKWSPALQIRTVLLSIQALLS-APNPDDPLSENIA 118 (143)
Q Consensus 76 G~icl~~l~--~~W~p~~~i~~il~~i~~ll~-~p~~~~p~n~~a~ 118 (143)
|+||+++|. ++|+|+++|++||.+|+++|. +||.++|+|.||+
T Consensus 111 G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 111 GVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 156 (160)
T ss_dssp CBBCGGGSHHHHTCCTTCCHHHHHHHHHHHHTSTTTTTCCCCCTTC
T ss_pred CEEehhhcCCccCCCccCcHHHHHHHHHHHHccCCCCCCCCChhhc
Confidence 999999997 899999999999999999996 5999999999987
No 47
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=2.8e-41 Score=239.25 Aligned_cols=120 Identities=24% Similarity=0.405 Sum_probs=108.9
Q ss_pred CcchhhhHhC-CCCCeEEeeCC-C--CcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCC-
Q 032304 1 MCSLIVWFVD-TAPGISASPSE-D--NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL- 75 (143)
Q Consensus 1 ~~e~~~l~~~-~~~~i~v~p~~-~--~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~- 75 (143)
++||++++++ +++|+++.+.+ + |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+.+
T Consensus 12 ~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~~ 91 (138)
T 1jat_B 12 LEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPCVNPTT 91 (138)
T ss_dssp HHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTT
T ss_pred HHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccccCCEeCCC
Confidence 4799999998 78999999853 3 49999999999999999999999999999999999999999999999999985
Q ss_pred Cce--EecCCCCcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHH
Q 032304 76 GRI--CLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHW 121 (143)
Q Consensus 76 G~i--cl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~ 121 (143)
|+| |++++. +|+|++++++||.+|+++|.+||+++++|.+|+++|
T Consensus 92 G~i~~cL~~l~-~W~p~~~i~~vl~~i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 92 GEVQTDFHTLR-DWKRAYTMETLLLDLRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp CBBCTTSHHHH-TCCTTCCHHHHHHHHHHHHTSHHHHTSCCCCTTCBC
T ss_pred CEEeeecccCC-CCCCcCcHHHHHHHHHHHHcCCCCCCCCCcchhhcC
Confidence 999 898876 899999999999999999999999999999887643
No 48
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.9e-39 Score=229.31 Aligned_cols=105 Identities=33% Similarity=0.626 Sum_probs=101.1
Q ss_pred CcchhhhHhCCCCCeEEe--eCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccce--eeeeeCCC
Q 032304 1 MCSLIVWFVDTAPGISAS--PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIY--HPNIDKLG 76 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~--p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~--HPni~~~G 76 (143)
++||+++++++++|+++. ++++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++| ||||+.+|
T Consensus 28 ~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV~~~G 107 (136)
T 2a7l_A 28 QKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNG 107 (136)
T ss_dssp HHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTBCTTC
T ss_pred HHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccCCCCC
Confidence 479999999999999965 88899999999999999999999999999999999999999999999999 99999999
Q ss_pred ceEecCCCCcCCcccCHHHHHHHHHhccc
Q 032304 77 RICLDILKDKWSPALQIRTVLLSIQALLS 105 (143)
Q Consensus 77 ~icl~~l~~~W~p~~~i~~il~~i~~ll~ 105 (143)
+||+++|.++|+|+++|++||.+|++||.
T Consensus 108 ~ICL~iL~~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 108 HICLSILTEDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp BBCCGGGTTTCCTTSCHHHHHHHHHHHTC
T ss_pred eEEchhcCCCCCCCCcHHHHHHHHHHHhC
Confidence 99999999999999999999999999974
No 49
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=4.3e-40 Score=240.32 Aligned_cols=118 Identities=25% Similarity=0.408 Sum_probs=110.3
Q ss_pred CcchhhhHhCCCCC-eEEee-CCCC--cceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeee-CC
Q 032304 1 MCSLIVWFVDTAPG-ISASP-SEDN--MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID-KL 75 (143)
Q Consensus 1 ~~e~~~l~~~~~~~-i~v~p-~~~~--~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~-~~ 75 (143)
++||+++++++++| +.+.+ +++| +++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+ .+
T Consensus 41 ~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~ 120 (170)
T 2hlw_A 41 LEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSN 120 (170)
T ss_dssp HHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCSSBCSSS
T ss_pred HHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccCCEeCCC
Confidence 47999999999888 67777 4554 99999999999999999999999999999999999999999999999999 69
Q ss_pred CceEecCCC--CcCCcccCHHHHHHHHHhcccC-CCCCCcccHHHH
Q 032304 76 GRICLDILK--DKWSPALQIRTVLLSIQALLSA-PNPDDPLSENIA 118 (143)
Q Consensus 76 G~icl~~l~--~~W~p~~~i~~il~~i~~ll~~-p~~~~p~n~~a~ 118 (143)
|+||+++|. ++|+|+++|++||.+|+++|.+ ||.++|+|.||+
T Consensus 121 G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 121 GVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp CBBCTTTCHHHHTCCSSCCHHHHHHHHHHHHHSTTTSSSCCCSSCC
T ss_pred CEEEhhhcCCCCCCCccCcHHHHHHHHHHHHccCCCCCCCCCcccc
Confidence 999999997 8999999999999999999975 999999999886
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.4e-37 Score=230.22 Aligned_cols=110 Identities=27% Similarity=0.559 Sum_probs=99.0
Q ss_pred CcchhhhHhCCCCCeEEeeCCCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCceEe
Q 032304 1 MCSLIVWFVDTAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 80 (143)
Q Consensus 1 ~~e~~~l~~~~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~icl 80 (143)
++||++|++++++||++.|.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+ ||||+.+|+||+
T Consensus 20 ~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~~~G~ICL 97 (187)
T 2f4w_A 20 KQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCL 97 (187)
T ss_dssp HHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBCTTSCBC-
T ss_pred HHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--CceeccCCeEee
Confidence 479999999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cCC---CCcCCcccCHHHHHHHHHhcccCCCCCCc
Q 032304 81 DIL---KDKWSPALQIRTVLLSIQALLSAPNPDDP 112 (143)
Q Consensus 81 ~~l---~~~W~p~~~i~~il~~i~~ll~~p~~~~p 112 (143)
++| .++|+|+++|.+||.+|+++|.+|+++..
T Consensus 98 ~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~~g 132 (187)
T 2f4w_A 98 SITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLG 132 (187)
T ss_dssp ---------CCTTCCHHHHHHHHHHHHHSCCCCTT
T ss_pred eccccCccCCCCcCcHHHHHHHHHHHhcCCCCCCc
Confidence 999 68999999999999999999999887644
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=4.6e-38 Score=232.58 Aligned_cols=132 Identities=18% Similarity=0.279 Sum_probs=118.0
Q ss_pred CcchhhhHhCC---CCCeEEeeCCCCcceEEEEEECC-CCCCCCC-----------cEEEEEEEcCCCCCCCCCeEEEec
Q 032304 1 MCSLIVWFVDT---APGISASPSEDNMRYFNVMILGP-TQSPYEG-----------GVFKLELFLPEEYPMAAPKVRFLT 65 (143)
Q Consensus 1 ~~e~~~l~~~~---~~~i~v~p~~~~~~~w~~~i~Gp-~~tpy~g-----------g~f~~~i~fp~~yP~~pP~v~f~t 65 (143)
++||++|++++ +.|+++.|.++|+++|+++|.|| ++|||+| |.|+++|.||++||++||+|+|.|
T Consensus 33 ~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~PP~V~f~t 112 (186)
T 1zuo_A 33 MKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVL 112 (186)
T ss_dssp HHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSSCCEEEEEE
T ss_pred HHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCCCCCeEEEeC
Confidence 47999999998 78999999999999999999998 9999998 899999999999999999999999
Q ss_pred cceee-eeeCCCceEecCCC-CcCCcccCHHHHHHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHc
Q 032304 66 KIYHP-NIDKLGRICLDILK-DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 140 (143)
Q Consensus 66 ~i~HP-ni~~~G~icl~~l~-~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a 140 (143)
++||| ||+.+|.||+++|. ++|+|+++|++||.+|+++|.+|+... .+.+++++|.+.+++.+.+.+
T Consensus 113 pi~hPnnV~~~G~ICL~iL~~~~WsP~~ti~~VL~sI~slL~~p~a~~--------~~~~~~~~Y~~~~~~~~~~~~ 181 (186)
T 1zuo_A 113 PVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARV--------QFGANKNQYNLARAQQSYNSI 181 (186)
T ss_dssp SCEESTTBCGGGBBCCGGGSTTTCCTTSCHHHHHHHHHHHHHHTTCEE--------CTTCCTTCCCHHHHHHHHHHH
T ss_pred CccCCCccCCCCcEEeccCCCCCCCCcCcHHHHHHHHHHHHcCCChhH--------hhccCHHHHhHHHHHHHHHHH
Confidence 99999 69999999999997 789999999999999999999986543 344456777777777776643
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.92 E-value=3.4e-27 Score=169.53 Aligned_cols=91 Identities=14% Similarity=0.203 Sum_probs=83.6
Q ss_pred cchhhhHhCCCCCeEEeeCCCCcceEEEEEECCCCCCCCCc----------EEEEEEEcCCCCCCCCCeEEEecc-ceee
Q 032304 2 CSLIVWFVDTAPGISASPSEDNMRYFNVMILGPTQSPYEGG----------VFKLELFLPEEYPMAAPKVRFLTK-IYHP 70 (143)
Q Consensus 2 ~e~~~l~~~~~~~i~v~p~~~~~~~w~~~i~Gp~~tpy~gg----------~f~~~i~fp~~yP~~pP~v~f~t~-i~HP 70 (143)
+||+.|++ ++.+..+|++.|.+.+.||+||+|+|| .|++++.||++||++||+|+|.+. +|||
T Consensus 39 eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~~~~hp 112 (172)
T 2z6o_A 39 EEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGKTA 112 (172)
T ss_dssp HHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTTCS
T ss_pred HHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCCCCCCC
Confidence 68888888 477778899999999999999999999 999999999999999999999998 9999
Q ss_pred eeeCCCceEecCCC-C---cCCcccCHHHHHH
Q 032304 71 NIDKLGRICLDILK-D---KWSPALQIRTVLL 98 (143)
Q Consensus 71 ni~~~G~icl~~l~-~---~W~p~~~i~~il~ 98 (143)
||+.+|+||||++. . .|+|.++|.++|.
T Consensus 113 nmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 113 KMYRGGKICLTDHFKPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp SBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHH
T ss_pred CCCCCCcEechhhccccccccCCccCHHHHHh
Confidence 99999999999994 3 4559999999984
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.82 E-value=1.9e-20 Score=135.11 Aligned_cols=95 Identities=24% Similarity=0.459 Sum_probs=82.9
Q ss_pred EEeeCCCCcceEEEEEECCCCCCCCCcE---EEEEEEcCCCCCCCCCeEEEecc----------ce-eeeeeCCCceEec
Q 032304 16 SASPSEDNMRYFNVMILGPTQSPYEGGV---FKLELFLPEEYPMAAPKVRFLTK----------IY-HPNIDKLGRICLD 81 (143)
Q Consensus 16 ~v~p~~~~~~~w~~~i~Gp~~tpy~gg~---f~~~i~fp~~yP~~pP~v~f~t~----------i~-HPni~~~G~icl~ 81 (143)
.+...+|...++.+.+.|.-.++|+||. |.+.|.||.+||++||.|.|.++ |+ |||||++|+||++
T Consensus 52 ~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~~~~~~I~~hpnVD~~G~I~lp 131 (162)
T 3r3q_A 52 RVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMNTISSSLPIQEYIDSNGWIALP 131 (162)
T ss_dssp EEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTTTSCTTSTHHHHBCTTSBBCCG
T ss_pred eeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccccccccccCCCCCCCCCCcEeCc
Confidence 3445567777777888887779999999 88999999999999999988651 77 9999999999999
Q ss_pred CCCCcCCc-ccCHHHHHHHHHhcccCCCCCC
Q 032304 82 ILKDKWSP-ALQIRTVLLSIQALLSAPNPDD 111 (143)
Q Consensus 82 ~l~~~W~p-~~~i~~il~~i~~ll~~p~~~~ 111 (143)
+|. +|+| +.++.++|.+|.++|.+|+++.
T Consensus 132 yL~-~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 132 ILH-AWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp GGG-SCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred ccc-cCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 995 6999 6799999999999999999875
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.65 E-value=2.2e-17 Score=116.36 Aligned_cols=66 Identities=18% Similarity=0.355 Sum_probs=59.8
Q ss_pred CcceEEEEEECCCCCCCCCc----------EEEEEEEcCCCCCCCCCeEEEecc-ceeeeeeCCCceEecCCCCcCCccc
Q 032304 23 NMRYFNVMILGPTQSPYEGG----------VFKLELFLPEEYPMAAPKVRFLTK-IYHPNIDKLGRICLDILKDKWSPAL 91 (143)
Q Consensus 23 ~~~~w~~~i~Gp~~tpy~gg----------~f~~~i~fp~~yP~~pP~v~f~t~-i~HPni~~~G~icl~~l~~~W~p~~ 91 (143)
+-..|...+.||+||+|+|+ .|.+++.||.+||.+||+|+|.+. .+||+++.+|+||++++ |+|.+
T Consensus 56 ~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~ldgkt~kmYr~GkICLdIh---wkPlW 132 (168)
T 3kpa_A 56 SDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPELEGKTVKMYRGGKICMTTH---FFPLW 132 (168)
T ss_dssp TTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTTCSSEETTTEECCCTT---HHHHH
T ss_pred ccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccccCcCccccCCCcEEeccc---cchhh
Confidence 34579999999999999999 999999999999999999999995 89999999999999985 66644
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.57 E-value=2.5e-15 Score=106.61 Aligned_cols=80 Identities=20% Similarity=0.457 Sum_probs=71.0
Q ss_pred CCCcceEEEEEECCCCCCCCCcEEEE--EEEcCCCCCCCCCeEEEecc------ceeeeeeCCCceEecCCCCcCCc-cc
Q 032304 21 EDNMRYFNVMILGPTQSPYEGGVFKL--ELFLPEEYPMAAPKVRFLTK------IYHPNIDKLGRICLDILKDKWSP-AL 91 (143)
Q Consensus 21 ~~~~~~w~~~i~Gp~~tpy~gg~f~~--~i~fp~~yP~~pP~v~f~t~------i~HPni~~~G~icl~~l~~~W~p-~~ 91 (143)
..++..|.++|. .+|+|++|.+ .|.||++||++||.| |.++ ..|||||.+|+||++.|.+ |++ ..
T Consensus 50 ~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL~~-W~~~~s 123 (146)
T 3obq_A 50 SRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYLHE-WKHPQS 123 (146)
T ss_dssp TCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHHHT-CCTTTC
T ss_pred hheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEecccccc-cCCCCC
Confidence 468899999997 6899999995 999999999999999 6655 4799999999999999975 988 77
Q ss_pred CHHHHHHHHHhcccC
Q 032304 92 QIRTVLLSIQALLSA 106 (143)
Q Consensus 92 ~i~~il~~i~~ll~~ 106 (143)
++.+++..|++.|.+
T Consensus 124 nL~~ll~~l~~~F~~ 138 (146)
T 3obq_A 124 DLLGLIQVMIVVFGD 138 (146)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhh
Confidence 999999999998864
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.86 E-value=0.043 Score=36.87 Aligned_cols=42 Identities=19% Similarity=0.259 Sum_probs=28.9
Q ss_pred cceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEec
Q 032304 24 MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLT 65 (143)
Q Consensus 24 ~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t 65 (143)
...+.+.|..-.+..-+.-.+.+.+.||++||..||.+...+
T Consensus 37 ~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 37 PPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp SCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred CCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 355666665222222234578899999999999999998654
No 57
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=94.49 E-value=0.13 Score=34.84 Aligned_cols=41 Identities=17% Similarity=0.339 Sum_probs=29.4
Q ss_pred cceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEec
Q 032304 24 MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLT 65 (143)
Q Consensus 24 ~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t 65 (143)
...+.+.|.+..+ .-..-.+.+++.+|.+||..+|.|.+.+
T Consensus 45 ~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 45 QIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp CSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred CcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 4567777763222 2123478899999999999999998765
No 58
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=94.30 E-value=0.16 Score=35.37 Aligned_cols=23 Identities=22% Similarity=0.355 Sum_probs=20.9
Q ss_pred EEEEEEEcCCCCCCCCCeEEEec
Q 032304 43 VFKLELFLPEEYPMAAPKVRFLT 65 (143)
Q Consensus 43 ~f~~~i~fp~~yP~~pP~v~f~t 65 (143)
.+.++|.+|.+||..+|.|...+
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEC
T ss_pred eEEEEEEcCCCCCCCCCcEEEEe
Confidence 79999999999999999998655
No 59
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=94.11 E-value=0.17 Score=33.82 Aligned_cols=42 Identities=21% Similarity=0.308 Sum_probs=28.4
Q ss_pred cceEEEEEECCCCCCC--CCcEEEEEEEcCCCCCCCCCeEEEec
Q 032304 24 MRYFNVMILGPTQSPY--EGGVFKLELFLPEEYPMAAPKVRFLT 65 (143)
Q Consensus 24 ~~~w~~~i~Gp~~tpy--~gg~f~~~i~fp~~yP~~pP~v~f~t 65 (143)
...+.+.|..+.+..- ..-.+.+.+.+|++||..+|.|...+
T Consensus 39 ~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 39 PWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp CEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEE
T ss_pred CeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEc
Confidence 4455566653222111 12478899999999999999998776
No 60
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.39 E-value=0.16 Score=34.01 Aligned_cols=40 Identities=18% Similarity=0.212 Sum_probs=28.3
Q ss_pred cceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEe
Q 032304 24 MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFL 64 (143)
Q Consensus 24 ~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~ 64 (143)
...+.+.|.. .+..-..-.+.+.+.+|.+||..+|.+...
T Consensus 39 ~~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 39 GTVFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp CEEEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred CCeEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 4577777763 321111347899999999999999998755
No 61
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=91.44 E-value=0.12 Score=35.06 Aligned_cols=23 Identities=22% Similarity=0.421 Sum_probs=20.5
Q ss_pred cEEEEEEEcCCCCCCCCCeEEEe
Q 032304 42 GVFKLELFLPEEYPMAAPKVRFL 64 (143)
Q Consensus 42 g~f~~~i~fp~~yP~~pP~v~f~ 64 (143)
-.+.+.+.||.+||..+|.|...
T Consensus 63 ~~~~L~v~~p~~YP~~~P~i~l~ 85 (137)
T 1ukx_A 63 VQVELRVKCPPTYPDVVPEIDLK 85 (137)
T ss_dssp CEEEEEECCCTTTTSSCCCCEEE
T ss_pred eEEEEEEECCCCCCCCCCcEEEe
Confidence 46889999999999999999874
No 62
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=90.98 E-value=2.1 Score=30.89 Aligned_cols=65 Identities=15% Similarity=0.280 Sum_probs=48.2
Q ss_pred CCCcceEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCceEecCCCCcCCcccCHHHHHHHH
Q 032304 21 EDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSI 100 (143)
Q Consensus 21 ~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~icl~~l~~~W~p~~~i~~il~~i 100 (143)
+.++....+.+..- .|-...++|.++.+||.++|.+.-.-|. |. .-.|++..++.+++...
T Consensus 22 d~~~~~i~l~~~D~-----~gR~H~l~v~l~~~yp~~~P~~~~DlP~--~~------------~~~w~~~ssL~~v~~qF 82 (186)
T 3zqs_A 22 DTCFSTIKLKAEDA-----SGREHLITLKLKAKYPAESPDYFVDFPV--PF------------CASWTPQSSLISIYSQF 82 (186)
T ss_dssp CTTSSEEEEEEECT-----TSCEEEEEEECCTTTTTSCCEEECCCSS--CC------------CCCCCTTCCHHHHHHHH
T ss_pred cCCccEEEEEEEeC-----CCCeEEEEEEECCCCCCCCCeeEEcCCC--Cc------------ccccCCCccHHHHHHHH
Confidence 46788888888743 3677789999999999999988655553 11 13799988888887766
Q ss_pred Hhcc
Q 032304 101 QALL 104 (143)
Q Consensus 101 ~~ll 104 (143)
+..+
T Consensus 83 ~~~L 86 (186)
T 3zqs_A 83 LAAI 86 (186)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 63
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=90.61 E-value=0.048 Score=36.24 Aligned_cols=36 Identities=17% Similarity=0.147 Sum_probs=0.0
Q ss_pred CCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Q 032304 106 APNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 141 (143)
Q Consensus 106 ~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 141 (143)
-.....|.+.+.|++|.+|++.|...||.|+..||.
T Consensus 20 ~~~~~~PQDA~VA~qy~~~~~~f~~TAr~WT~~~a~ 55 (108)
T 2cwb_A 20 GETTTEAVDAATAEKVFKQYANDNGVDGEWTYDDAT 55 (108)
T ss_dssp ------------------------------------
T ss_pred CcccCCchhHHHHHHHHhchhccccccccccccCcC
Confidence 345678899999999999999999999999977764
No 64
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=90.18 E-value=0.21 Score=34.52 Aligned_cols=25 Identities=28% Similarity=0.595 Sum_probs=21.5
Q ss_pred cEEEEEEEcCCCCCCCCCeEEEecc
Q 032304 42 GVFKLELFLPEEYPMAAPKVRFLTK 66 (143)
Q Consensus 42 g~f~~~i~fp~~yP~~pP~v~f~t~ 66 (143)
-.+.+++.+|.+||..||.+.....
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEECT
T ss_pred ceEEEEEECCCCCCCCCCeEEEEcc
Confidence 3688999999999999999986653
No 65
>1zoq_C CREB-binding protein, interferon regulatory factor 3; transcription regulation, transferase, transcription/transferase complex; 2.37A {Homo sapiens} SCOP: a.153.1.1 PDB: 1jjs_A
Probab=34.63 E-value=28 Score=19.05 Aligned_cols=44 Identities=18% Similarity=0.228 Sum_probs=30.5
Q ss_pred HHHHHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Q 032304 97 LLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 141 (143)
Q Consensus 97 l~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 141 (143)
|..|-..+.+|+ ..-.+..+..+++.|+......++..+.+|+.
T Consensus 3 LqqLl~tlksp~-sp~qqqqvl~ILksnPqLMAAfIkQR~~~y~~ 46 (47)
T 1zoq_C 3 LQDLLRTLKSPS-SPQQQQQVLNILKSNPQLMAAFIKQRTAKYVA 46 (47)
T ss_dssp HHHHHHTCCSCC-CHHHHHHHHHHHHTCHHHHHHHHHHTTTCCCC
T ss_pred HHHHHHHhcCCC-CHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcc
Confidence 445555566666 22255677789999999888888877777653
No 66
>3s7v_A Major capsid protein VP1; jelly-roll, antiparallel beta sandwich, major capsid protein protein; 2.55A {Ki polyomavirus} PDB: 3s7x_A
Probab=24.47 E-value=2e+02 Score=21.67 Aligned_cols=40 Identities=18% Similarity=0.241 Sum_probs=28.3
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCeEEEeccceeeeeeCCCc--eEe
Q 032304 38 PYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGR--ICL 80 (143)
Q Consensus 38 py~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~~G~--icl 80 (143)
--|+-+|..++.=-. ..||.+.|....--+.+|+||. +|.
T Consensus 198 kNENtRYFG~~tGG~---~TPPVl~ftNt~TTvLLDENGVGpLCk 239 (277)
T 3s7v_A 198 RNDNCRYFGRVVGGA---ATPPVVSYGNNSTIPLLDENGIGILCL 239 (277)
T ss_dssp SCCSEEEEEEEECCS---SCCCEEEEESSCCEECCCTTSCCEECT
T ss_pred cCcCceeeEEecCCC---CCCCeEEecCceeEEEEcCCCcccccc
Confidence 345555555554433 3689999999999999999864 774
No 67
>1h3o_B Transcription initiation factor TFIID 20/15 kDa subunits; transcription/TBP-associated factors, TBP-associated factors; 2.3A {Homo sapiens} SCOP: a.22.1.3
Probab=24.37 E-value=63 Score=19.59 Aligned_cols=42 Identities=17% Similarity=0.265 Sum_probs=31.6
Q ss_pred HHhcccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Q 032304 100 IQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 141 (143)
Q Consensus 100 i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 141 (143)
|+.|+...++...+.+++.+++.+=.+.|...+-..+.+.|+
T Consensus 11 L~~Lv~~idp~~~ld~~vee~ll~lADdFV~~V~~~ac~lAK 52 (76)
T 1h3o_B 11 LQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLAR 52 (76)
T ss_dssp HHHHHHHHCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444446778889999988888888899988888887764
No 68
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=24.12 E-value=73 Score=23.00 Aligned_cols=26 Identities=19% Similarity=0.539 Sum_probs=21.5
Q ss_pred CCCcEEEEEEEcCCCCCC-----CCCeEEEe
Q 032304 39 YEGGVFKLELFLPEEYPM-----AAPKVRFL 64 (143)
Q Consensus 39 y~gg~f~~~i~fp~~yP~-----~pP~v~f~ 64 (143)
-+.|.|.|+-.+|--||. .||.|-|.
T Consensus 108 d~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 108 FGTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 457999999999999998 67777654
No 69
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=23.78 E-value=55 Score=27.22 Aligned_cols=28 Identities=11% Similarity=-0.016 Sum_probs=24.1
Q ss_pred ccHHHHHHHHHCHHHHHHHHHHHHHHHc
Q 032304 113 LSENIAKHWKTNEAEAVETAKEWTRLYA 140 (143)
Q Consensus 113 ~n~~a~~~~~~~~~~f~~~~~~~~~~~a 140 (143)
..+|+.++..+|++.|++.|++...++.
T Consensus 276 t~ee~~~l~~~dp~~~~~~~~~Sm~rhv 303 (552)
T 2fkn_A 276 SLDEADRLRQDTPELYVRLAKQSMKKHV 303 (552)
T ss_dssp CHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 4577888889999999999999988764
No 70
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=23.58 E-value=56 Score=27.18 Aligned_cols=28 Identities=11% Similarity=0.027 Sum_probs=24.1
Q ss_pred ccHHHHHHHHHCHHHHHHHHHHHHHHHc
Q 032304 113 LSENIAKHWKTNEAEAVETAKEWTRLYA 140 (143)
Q Consensus 113 ~n~~a~~~~~~~~~~f~~~~~~~~~~~a 140 (143)
..+|+.++..+|++.|++.|++...++.
T Consensus 275 t~ee~~~l~~~dp~~~~~~~~~Sm~rhv 302 (551)
T 1x87_A 275 TLDEAAELRARDPKQYIARAKQSIAAHV 302 (551)
T ss_dssp CHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 3478888889999999999999988764
No 71
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=23.24 E-value=57 Score=27.16 Aligned_cols=28 Identities=21% Similarity=0.127 Sum_probs=24.1
Q ss_pred ccHHHHHHHHHCHHHHHHHHHHHHHHHc
Q 032304 113 LSENIAKHWKTNEAEAVETAKEWTRLYA 140 (143)
Q Consensus 113 ~n~~a~~~~~~~~~~f~~~~~~~~~~~a 140 (143)
..+|+.++..+|++.|++.|++...++.
T Consensus 280 t~ee~~~l~~~dp~~~~~~~~~Sm~rhv 307 (557)
T 1uwk_A 280 TWEQYRDRAQTEPAAVVKAAKQSMAVHV 307 (557)
T ss_dssp CHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 3477888889999999999999988764
No 72
>1sid_A Polyomavirus coat protein VP1; icosahedral virus; HET: SIA GAL BGC; 3.65A {Mouse polyomavirus} SCOP: b.121.6.1 PDB: 1sie_A*
Probab=22.21 E-value=2.2e+02 Score=22.44 Aligned_cols=25 Identities=20% Similarity=0.456 Sum_probs=20.5
Q ss_pred CCCCeEEEeccceeeeeeCCCc--eEe
Q 032304 56 MAAPKVRFLTKIYHPNIDKLGR--ICL 80 (143)
Q Consensus 56 ~~pP~v~f~t~i~HPni~~~G~--icl 80 (143)
..||.+.|....--+.+|+||. +|.
T Consensus 248 ~TPPVlqftNt~TTvLLDENGVGpLCk 274 (383)
T 1sid_A 248 TTPPVLQFTNTLTTVLLDENGVGPLCK 274 (383)
T ss_dssp SCCCEEEEESSCEEECCCTTSCCCBCS
T ss_pred CCCCeEEeccceeEEEEcCCCcccccc
Confidence 3689999999999999999864 663
No 73
>2ccv_A Helix pomatia agglutinin; lectin, snail; HET: A2G NAG; 1.30A {Helix pomatia} SCOP: b.154.1.1 PDB: 2cgy_A* 2cgz_A* 2ce6_A
Probab=21.38 E-value=1.5e+02 Score=18.64 Aligned_cols=25 Identities=12% Similarity=0.119 Sum_probs=19.3
Q ss_pred CcEEEEEEEcCCCCCCCCCeEEEecc
Q 032304 41 GGVFKLELFLPEEYPMAAPKVRFLTK 66 (143)
Q Consensus 41 gg~f~~~i~fp~~yP~~pP~v~f~t~ 66 (143)
+..+...|.|+..|+. +|+|.+.-.
T Consensus 28 ~R~~~~~V~F~~~F~~-~P~V~v~l~ 52 (101)
T 2ccv_A 28 TRELAKNITFASPYCR-PPVVLLSIT 52 (101)
T ss_dssp CEEEEEEEECSSCCSS-CCEEEEEEE
T ss_pred ceEEEEEeEeCcccCC-CCEEEEEeE
Confidence 3467788999999995 999977654
No 74
>3kxt_A Chromatin protein CREN7; protein-DNA complex, crenarchaea chromatin protein, minor-GR binding, methylation; 1.60A {Sulfolobus solfataricus} PDB: 2jtm_A 3lwh_A* 3lwi_A*
Probab=20.72 E-value=1.3e+02 Score=17.10 Aligned_cols=11 Identities=36% Similarity=0.972 Sum_probs=8.8
Q ss_pred EEEEcCCCCCC
Q 032304 46 LELFLPEEYPM 56 (143)
Q Consensus 46 ~~i~fp~~yP~ 56 (143)
|+-.+|++||.
T Consensus 46 fR~k~pddy~~ 56 (56)
T 3kxt_A 46 FRHKLPDDYPI 56 (56)
T ss_dssp EEEECCTTCCC
T ss_pred eeeeCcCcCCC
Confidence 56788999984
No 75
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=20.65 E-value=74 Score=21.01 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=21.1
Q ss_pred eeeCCCceEecCCCCcCCcccCHHHHHHHHHhcc
Q 032304 71 NIDKLGRICLDILKDKWSPALQIRTVLLSIQALL 104 (143)
Q Consensus 71 ni~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll 104 (143)
-||++|+|-.-..........+..+++..|+.++
T Consensus 138 liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~ll 171 (171)
T 2yzh_A 138 IIDKEGKVAYVQLVPEITEEPNYDEVVNKVKELI 171 (171)
T ss_dssp EECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC-
T ss_pred EEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhhC
Confidence 3567888876443333334456788888887764
No 76
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=20.08 E-value=2.1e+02 Score=19.35 Aligned_cols=43 Identities=14% Similarity=0.225 Sum_probs=32.2
Q ss_pred cceEE--EEEECCCCCCCC-CcEEEEEEEcCCCCCCCCCeEEEeccce
Q 032304 24 MRYFN--VMILGPTQSPYE-GGVFKLELFLPEEYPMAAPKVRFLTKIY 68 (143)
Q Consensus 24 ~~~w~--~~i~Gp~~tpy~-gg~f~~~i~fp~~yP~~pP~v~f~t~i~ 68 (143)
...|. +.+.|+.|.... .-+=++...+-++|+. |...+..+-|
T Consensus 32 ~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~n--p~r~v~~pPF 77 (140)
T 3qrl_A 32 VRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFAN--PNRTFTDPPF 77 (140)
T ss_dssp CEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSSS--CEEEECSTTC
T ss_pred ccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCCC--CeEEEcCCCc
Confidence 36898 889999988654 4566788889899884 8777776643
Done!